BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045263
(742 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|297737705|emb|CBI26906.3| unnamed protein product [Vitis vinifera]
Length = 988
Score = 994 bits (2570), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/770 (65%), Positives = 597/770 (77%), Gaps = 31/770 (4%)
Query: 1 MALTVAVSQSCGMCFGGKQLRCAIILKAGRGCRNVLGTNMRFSNLLLPKIPKICSRSKHK 60
MAL V+V +SCGMC K LR AI +A RG +N LG MRFSN LL KI K+CSRSKHK
Sbjct: 1 MALAVSVVRSCGMCCSEKPLRIAIAFEAERGYQNALGRKMRFSNFLLSKISKLCSRSKHK 60
Query: 61 YAECMLKLVEPYDESSIP-QPKLLKKASVVMGYDSLNDLFKYGRADK-------DAMDDF 112
+ E +L V+ Y ++SI + KLL K SV+MGYDSL+DL + R K D +++
Sbjct: 61 FPEKLLDEVDSYGKASISDRSKLLNKVSVLMGYDSLHDLIENERVQKESDMNLKDEINNV 120
Query: 113 DISLACKRFPCITLGSTPPVGLYDETKAGGSEMKSLLADQSCEAVVSNPMDAELR-VDRF 171
DISLAC++FP I LG++PPV LYDE K S+++SLLA Q CE +S+ + DRF
Sbjct: 121 DISLACRKFPSIILGNSPPVELYDENKCH-SDVRSLLAAQICEEFLSSSGAEKWDGPDRF 179
Query: 172 GLSEAWPSLYPALPNESST------SSEV----------GSLPSEASIEP---LLDKCIS 212
SE WPSL P LPN +++ S+V L S+ + EP +LDK IS
Sbjct: 180 --SETWPSLCPTLPNINASLLRKEKKSDVLVTVEGPPANMVLESQNNAEPVELILDKSIS 237
Query: 213 CVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGM 272
+PGL KR QLENCGF+TLRKLL HFPRTYADL+NA I +DDGQY I IG+I+SSRG+
Sbjct: 238 FIPGLQKRHCRQLENCGFHTLRKLLQHFPRTYADLKNALIGIDDGQYMISIGKILSSRGV 297
Query: 273 KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKS 332
KA CSFSFLEV+VGCEIAD E+ + DS KK IYLHLKKFFRGTRFT++PFL+
Sbjct: 298 KASCSFSFLEVVVGCEIADCESKYEQMIGANDSWGKKTIYLHLKKFFRGTRFTNVPFLRC 357
Query: 333 IEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGL 392
++ KHK G+ VCVSGKVR MR+ +HYEMREYN+D+++D+ D S+ KGRPY IYPSKGGL
Sbjct: 358 LQEKHKEGDIVCVSGKVRTMRTKDHYEMREYNLDLIEDDQDSSVCPKGRPYSIYPSKGGL 417
Query: 393 NASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLI 452
N++ LRD I+RAL +LP N DP+PK+I ++FGLL L AY+GIHQPK + EADLARKRLI
Sbjct: 418 NSNFLRDIISRALHSLPVNIDPIPKDIIEDFGLLSLHSAYVGIHQPKDLKEADLARKRLI 477
Query: 453 FDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSL 512
FDEFFYLQLGRL+Q+LEGLGT+ EK+GLLDKYRKP LN ++E WSSLTK L+ALPYSL
Sbjct: 478 FDEFFYLQLGRLFQILEGLGTKIEKDGLLDKYRKPELNTVFVEEWSSLTKNFLKALPYSL 537
Query: 513 TSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELL 572
TSSQLSA SEIIWDLK+PVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELL
Sbjct: 538 TSSQLSAASEIIWDLKRPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELL 597
Query: 573 ATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAE 632
A QHYE L+ LL+NME + KP IALLTGSTP KQSRM K LQ GDI+LVIGTHSLI+E
Sbjct: 598 ALQHYEQLINLLENMEGAECKPSIALLTGSTPSKQSRMTHKGLQNGDISLVIGTHSLISE 657
Query: 633 KVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLA 692
KVEFSALR+A+VDEQ RFGV+QRGRFNSKLYY S+SS MA +SD + D MAPH+LA
Sbjct: 658 KVEFSALRIAVVDEQHRFGVIQRGRFNSKLYYNSISSRMAEASSDVLSEGDTRMAPHILA 717
Query: 693 MSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYK 742
MSATPIPRTLALALYGDMSLTQITDLPPGR P++TY IEG + G+E+VY+
Sbjct: 718 MSATPIPRTLALALYGDMSLTQITDLPPGRTPVETYTIEGCDAGFEDVYQ 767
>gi|359472626|ref|XP_002280664.2| PREDICTED: ATP-dependent DNA helicase recG-like [Vitis vinifera]
Length = 1036
Score = 977 bits (2526), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/779 (64%), Positives = 589/779 (75%), Gaps = 48/779 (6%)
Query: 9 QSCGMCFGGKQLRCAIILKAGRGCRNVLGTNMRFSNLLLPKIPKICSRSKHKYAECMLKL 68
QS C K LR AI +A RG +N LG MRFSN LL KI K+CSRSKHK+ E +L
Sbjct: 40 QSADECCSEKPLRIAIAFEAERGYQNALGRKMRFSNFLLSKISKLCSRSKHKFPEKLLDE 99
Query: 69 VEPYDESSIP-QPKLLKKASVVMGYDSLNDLFKYGRADK-------DAMDDFDISLACKR 120
V+ Y ++SI + KLL K SV+MGYDSL+DL + R K D +++ DISLAC++
Sbjct: 100 VDSYGKASISDRSKLLNKVSVLMGYDSLHDLIENERVQKESDMNLKDEINNVDISLACRK 159
Query: 121 FPCITLGSTPPVGLYDETKAGGSEMKSLLADQSCEAVVSNPMDAELR-VDRFGLSEAWPS 179
FP I LG++PPV LYDE K S+++SLLA Q CE +S+ + DRF SE WPS
Sbjct: 160 FPSIILGNSPPVELYDENKCH-SDVRSLLAAQICEEFLSSSGAEKWDGPDRF--SETWPS 216
Query: 180 LYPALPN--------ESSTSSEVGSLP-------------------------SEASIEP- 205
L P LPN ESS++ V S P S+ + EP
Sbjct: 217 LCPTLPNINASLLRKESSSTLPVSSQPLTMETKEKSDVLVTVEGPPANMVLESQNNAEPV 276
Query: 206 --LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFI 263
+LDK IS +PGL KR QLENCGF+TLRKLL HFPRTYADL+NA I +DDGQY I I
Sbjct: 277 ELILDKSISFIPGLQKRHCRQLENCGFHTLRKLLQHFPRTYADLKNALIGIDDGQYMISI 336
Query: 264 GEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTR 323
G+I+SSRG+KA CSFSFLEV+VGCEIAD E+ + DS KK IYLHLKKFFRGTR
Sbjct: 337 GKILSSRGVKASCSFSFLEVVVGCEIADCESKYEQMIGANDSWGKKTIYLHLKKFFRGTR 396
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY 383
FT++PFL+ ++ KHK G+ VCVSGKVR MR+ +HYEMREYN+D+++D+ D S+ KGRPY
Sbjct: 397 FTNVPFLRCLQEKHKEGDIVCVSGKVRTMRTKDHYEMREYNLDLIEDDQDSSVCPKGRPY 456
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
IYPSKGGLN++ LRD I+RAL +LP N DP+PK+I ++FGLL L AY+GIHQPK + E
Sbjct: 457 SIYPSKGGLNSNFLRDIISRALHSLPVNIDPIPKDIIEDFGLLSLHSAYVGIHQPKDLKE 516
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
ADLARKRLIFDEFFYLQLGRL+Q+LEGLGT+ EK+GLLDKYRKP LN ++E WSSLTK
Sbjct: 517 ADLARKRLIFDEFFYLQLGRLFQILEGLGTKIEKDGLLDKYRKPELNTVFVEEWSSLTKN 576
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
L+ALPYSLTSSQLSA SEIIWDLK+PVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA
Sbjct: 577 FLKALPYSLTSSQLSAASEIIWDLKRPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 636
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
AFMVPTELLA QHYE L+ LL+NME + KP IALLTGSTP KQSRM K LQ GDI+LV
Sbjct: 637 AFMVPTELLALQHYEQLINLLENMEGAECKPSIALLTGSTPSKQSRMTHKGLQNGDISLV 696
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
IGTHSLI+EKVEFSALR+A+VDEQ RFGV+QRGRFNSKLYY S+SS MA +SD + D
Sbjct: 697 IGTHSLISEKVEFSALRIAVVDEQHRFGVIQRGRFNSKLYYNSISSRMAEASSDVLSEGD 756
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYK 742
MAPH+LAMSATPIPRTLALALYGDMSLTQITDLPPGR P++TY IEG + G+E+VY+
Sbjct: 757 TRMAPHILAMSATPIPRTLALALYGDMSLTQITDLPPGRTPVETYTIEGCDAGFEDVYQ 815
>gi|255570116|ref|XP_002526020.1| conserved hypothetical protein [Ricinus communis]
gi|223534667|gb|EEF36360.1| conserved hypothetical protein [Ricinus communis]
Length = 983
Score = 940 bits (2429), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/767 (62%), Positives = 566/767 (73%), Gaps = 69/767 (8%)
Query: 40 MRFSNLLLPKIPKICSRSKHKYAECMLKLVEPYDESSIP-QPKLLKKASVVMGYDSLNDL 98
MRF + LL I ++ R KH +AE +L YD S+ + KLL K + ++ YD +DL
Sbjct: 1 MRFCHSLL-NISRLHIRFKHNFAEKLLDQAYKYDMPSVSDRSKLLNKVTALVDYDGFHDL 59
Query: 99 FKYGRAD-------KDAMDDFDISLACKRFPCITLGSTPPVGLYDETKAGGSEMKSLLAD 151
+ G+A KDA DDFD+SLACKRFP ITLGS+PPV LYDET EMK+LLA
Sbjct: 60 IENGKAGEQSGQDLKDATDDFDVSLACKRFPSITLGSSPPVELYDET-TKPLEMKTLLAA 118
Query: 152 QSCEAVVSNPMDAELRVDRFGLSEAWPS-------------------------------- 179
+S + VS+ + + VD G E W S
Sbjct: 119 ESYKEFVSDALGMKW-VDSDGFYEQWTSADAVPSENYSIPKAEKDESACMTTESREEKTY 177
Query: 180 LYPALPNESSTSSEVGSLPSEASIE------------------------PLLDKCISCVP 215
L L ES S V S A + LD +SC+P
Sbjct: 178 LLEELKEESVNSLSVHSEDVTAETKEKIDNIFSMQETSNKKVGESLLSAAFLDTPVSCIP 237
Query: 216 GLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAG 275
GLSKR +HQLENCGF+TLRKLLHHFPRTYADLQNA + +DDGQY I +G+I+SSRG++A
Sbjct: 238 GLSKRQHHQLENCGFHTLRKLLHHFPRTYADLQNALVGVDDGQYLISVGKILSSRGVRAS 297
Query: 276 CSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEG 335
SFSFLEV+VGCE+A E S ++ DSG+ + IYLHLKKFFRG RFT+ PFLKS+
Sbjct: 298 YSFSFLEVVVGCEVAIDE--SQHNTIDTDSGETRTIYLHLKKFFRGVRFTNQPFLKSLAN 355
Query: 336 KHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNAS 395
KHK+G+ VC+SGKV+ M + +HYEMREYNIDVLKD+D SL +GRPYPIYPSKGGLN
Sbjct: 356 KHKLGDVVCISGKVKTMSTKDHYEMREYNIDVLKDDDVSSLHPEGRPYPIYPSKGGLNPD 415
Query: 396 LLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDE 455
LRD IARALQAL DP+PKEI Q+F LL L DAY GIHQP++++EAD AR+RLIFDE
Sbjct: 416 FLRDIIARALQALGPGIDPIPKEIIQDFRLLHLHDAYTGIHQPRNVEEADSARRRLIFDE 475
Query: 456 FFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSS 515
FFYLQLGRL+QMLEGL T+ EK+GLL KYRKP LNA Y+E WSSLTKK L+ALPYSLTSS
Sbjct: 476 FFYLQLGRLFQMLEGLSTRTEKDGLLLKYRKPELNALYVENWSSLTKKFLKALPYSLTSS 535
Query: 516 QLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQ 575
QL+A+SEIIWDLK+PVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLA Q
Sbjct: 536 QLNAVSEIIWDLKRPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLAIQ 595
Query: 576 HYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVE 635
HYEHLLKLL+ MEE++ KP IALLTGSTP+KQSRMIRKDLQ+GDI++VIGTHSLI+E VE
Sbjct: 596 HYEHLLKLLETMEENQSKPSIALLTGSTPLKQSRMIRKDLQSGDISMVIGTHSLISENVE 655
Query: 636 FSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSA 695
FSALR+A+VDEQ RFGV+QRG+FNSKLYYTS+ S MA+ S GS K D +MAPH+LAMSA
Sbjct: 656 FSALRIAVVDEQHRFGVIQRGQFNSKLYYTSLRSRMAVTTSIGSSKGDVYMAPHILAMSA 715
Query: 696 TPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYK 742
TPIPRTLALALYGDMSLTQITDLPPGRIP++T+IIEGN +G+E++YK
Sbjct: 716 TPIPRTLALALYGDMSLTQITDLPPGRIPVETHIIEGNSQGFEDIYK 762
>gi|224108331|ref|XP_002314808.1| predicted protein [Populus trichocarpa]
gi|222863848|gb|EEF00979.1| predicted protein [Populus trichocarpa]
Length = 888
Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/675 (65%), Positives = 522/675 (77%), Gaps = 30/675 (4%)
Query: 90 MGYDSLNDLFKYGRADK-------DAMDDFDISLACKRFPCITLGSTPPVGLYDETKAGG 142
M YD +DL + A K D DDFD+SLACKRFP I LGS+PPV LYDE
Sbjct: 1 MDYDGFHDLIENETAAKQFRGNAKDDTDDFDVSLACKRFPSIVLGSSPPVELYDE----- 55
Query: 143 SEMKSLLADQSCEAVVSNPMDAELRVDRFGLSEAWPS-----LYPALPNE--SSTSSEVG 195
SE+ SLLA + E + N M + VD L E S + ++P E S++G
Sbjct: 56 SEINSLLAAKILEGFLPNAMGVKC-VDPDTLHEQLTSPHTENVNSSMPKELREKIVSKIG 114
Query: 196 SLPSEASIE-------PLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQ 248
+E LDK ISC+PGLS R QLENCGFYTLRKLL HFPRTYADLQ
Sbjct: 115 MEEYTTKVELESQVNLAYLDKPISCLPGLSTRQRRQLENCGFYTLRKLLQHFPRTYADLQ 174
Query: 249 NAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQK 308
NA +DDGQY I +G++ SSR +KA S +F EVIV CEI + E S + + +SG K
Sbjct: 175 NAHFGIDDGQYLISVGKVTSSRAVKASYSLAFAEVIVACEIINNE--SKHLIDDNNSGGK 232
Query: 309 KKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSN-NHYEMREYNIDV 367
K IYLHLKK+FRGTRFT +PFLK +E KHK+G+ VCVSGKVR M + +HYE+REYNIDV
Sbjct: 233 KTIYLHLKKYFRGTRFTCLPFLKKVEAKHKLGDVVCVSGKVRTMSTKGDHYEIREYNIDV 292
Query: 368 LKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLC 427
L+D +D S +GRPYPIYPSKGGLN LRDTI+RA++AL A+ DP+PKEI Q+FGLL
Sbjct: 293 LEDREDSSSIVEGRPYPIYPSKGGLNPDFLRDTISRAVRALLADVDPIPKEIIQDFGLLR 352
Query: 428 LFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKP 487
L +AY+GIHQPK+ DEADLARKRLIFDEFFYLQLGRL+QMLEGLG++ EK+GLLDKY KP
Sbjct: 353 LHEAYIGIHQPKNADEADLARKRLIFDEFFYLQLGRLFQMLEGLGSRMEKDGLLDKYSKP 412
Query: 488 RLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTV 547
LNA Y+E WS+LTKK L+ALPYSLTSSQLSA S+IIWDLK+PVPMNRLLQGDVGCGKT+
Sbjct: 413 ELNAVYVEEWSNLTKKFLKALPYSLTSSQLSASSQIIWDLKRPVPMNRLLQGDVGCGKTI 472
Query: 548 VAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQ 607
VAFLACMEVIGSGYQAAFMVPTELLA QHYE LL LL+ M E + KP +ALLTGSTP KQ
Sbjct: 473 VAFLACMEVIGSGYQAAFMVPTELLAIQHYEQLLNLLETMGEVQSKPSVALLTGSTPSKQ 532
Query: 608 SRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSM 667
SRMIR+DLQ+GDI++VIGTHSLI+E VEFSALR+A+VDEQQRFGV+QRGRFNSKLY++ +
Sbjct: 533 SRMIRRDLQSGDISMVIGTHSLISENVEFSALRIAVVDEQQRFGVIQRGRFNSKLYHSPL 592
Query: 668 SSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
SS M+ N+D S + D HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGR+P++T
Sbjct: 593 SSRMSASNTDTSSEGDFHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRVPVET 652
Query: 728 YIIEGNEKGYENVYK 742
YI EGN G+E+VYK
Sbjct: 653 YIFEGNYDGFEDVYK 667
>gi|186498546|ref|NP_178253.3| ATP-dependent DNA helicase RecG [Arabidopsis thaliana]
gi|330250357|gb|AEC05451.1| ATP-dependent DNA helicase RecG [Arabidopsis thaliana]
Length = 973
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/752 (59%), Positives = 552/752 (73%), Gaps = 30/752 (3%)
Query: 11 CGMCFGGKQLRCAIILKAGRGCRNVLGTNMRFSNLLLPKIPKICSRSKHKYAECMLKLVE 70
C MC G ++LR I+++A RG N +R SN K+ I RSKHKY++ +L+ VE
Sbjct: 9 CSMCCGSRRLRSVIVIQAQRGNWN----RIRLSNFFFSKVWNISYRSKHKYSDNLLEQVE 64
Query: 71 PYDESSIP-QPKLLKKASVVMGYDSLNDLFKYGRADKDAMDDFDISLACKRFPCITLGST 129
Y + + Q KL+ K + +M D+++D F ++D+ D + LACKRFP I LG +
Sbjct: 65 KYASARLENQSKLITKVAALMECDNVDD-FIDKKSDEQVKKD--LVLACKRFPSIILGDS 121
Query: 130 PPVGLYDETKAGGSEMKSLLADQSCEAVVSNPMDAELRVDRFGLSEAWPSLYPAL----- 184
PV LY +K+ G E S+L + + + PM D LS S P L
Sbjct: 122 RPVELYSNSKSYG-ESSSILKTPTDNSFLPTPMHGGW-FDPDNLSRTLSSFCPELLQNDD 179
Query: 185 ---PNE------SSTSSEVGSLPSEAS------IEPLLDKCISCVPGLSKRLYHQLENCG 229
P E SS +S+ + EA+ + L I +PGLSKR +QL++CG
Sbjct: 180 SSDPREDILDDGSSFTSKTATSEVEATSDDVFAAQRFLATSIDSMPGLSKRHSNQLDSCG 239
Query: 230 FYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEI 289
F+T++KLLHHFPRTYADLQNAQ+D++DGQY IF+G+++SS+G++A SFSFLEVIV CE+
Sbjct: 240 FHTMKKLLHHFPRTYADLQNAQVDIEDGQYLIFVGKVLSSKGVRASSSFSFLEVIVSCEV 299
Query: 290 ADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKV 349
+ + T D N + K I+LHLKKFFRGTRFT PFL SI+ KHKVG+ VC+SGKV
Sbjct: 300 SGRDRTPEDLSHNAEDKAGKSIFLHLKKFFRGTRFTWQPFLNSIQEKHKVGDLVCISGKV 359
Query: 350 RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALP 409
+++R+ +H+EMREYNIDVLKDE++ S RA+GRPYPIYPSKGGLN L D I+RAL+ LP
Sbjct: 360 KSLRAEDHFEMREYNIDVLKDEEESSHRAQGRPYPIYPSKGGLNPKFLSDVISRALRVLP 419
Query: 410 ANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLE 469
AN DP+PKEIT+ FGL L DAY+GIH+PK +DEADLARKRLIFDEFFYLQL RLYQML+
Sbjct: 420 ANMDPIPKEITKVFGLPSLNDAYVGIHEPKTLDEADLARKRLIFDEFFYLQLARLYQMLQ 479
Query: 470 GLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQ 529
LGT+ EK+ LL+K+RKP LN+ Y+E WS+LTK L+ALPYSLT SQLSA+SEIIWDLK+
Sbjct: 480 SLGTKIEKDVLLEKFRKPVLNSVYIEEWSTLTKSFLKALPYSLTPSQLSAVSEIIWDLKR 539
Query: 530 PVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEE 589
PVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFM PTELLA QHYE LL+NME
Sbjct: 540 PVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMAPTELLAIQHYEQCRDLLENMEG 599
Query: 590 DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQR 649
KP I LLTGSTP KQSRMIR+DLQ+G I+ +IGTHSLIAEK+E+SALR+A+VDEQQR
Sbjct: 600 VSSKPTIGLLTGSTPAKQSRMIRQDLQSGAISFIIGTHSLIAEKIEYSALRIAVVDEQQR 659
Query: 650 FGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGD 709
FGV+QRG+FNSKLY TSM S +SD + K D MAPHVLAMSATPIPR+LALALYGD
Sbjct: 660 FGVIQRGKFNSKLYGTSMISKSGSSDSDDTSKADLSMAPHVLAMSATPIPRSLALALYGD 719
Query: 710 MSLTQITDLPPGRIPIKTYIIEGNEKGYENVY 741
+SLTQIT +P GRIP++T+I EGNE G + VY
Sbjct: 720 ISLTQITGMPLGRIPVETHIFEGNETGIKEVY 751
>gi|356523432|ref|XP_003530343.1| PREDICTED: ATP-dependent DNA helicase recG-like [Glycine max]
Length = 1178
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/738 (60%), Positives = 538/738 (72%), Gaps = 65/738 (8%)
Query: 52 KICSRSKHKYAECMLKLVEPYDESSIPQPKLLKKASVVMGYDSLNDLFKYGRADK----- 106
K+C R KHK AE K+ S KL K +M Y+ L DL G +K
Sbjct: 238 KMCYRLKHKLAE--KKVARGVGSGS----KLRNKVVALMDYN-LPDLIGNGSGEKKSKMS 290
Query: 107 --DAMDDFDISLACKRFPCITLGSTPPVGLYDETKAGGSEMKSLLADQSCEAVVSNPMDA 164
DA+DD DISL CKRFP ITLG P V LYD T++ M SL A ++ E S+ ++A
Sbjct: 291 PKDALDDLDISLICKRFPSITLGYAPRVDLYDGTRSCSETMNSL-ATENFENSFSDSLEA 349
Query: 165 ELRVDRFGLSEAWPSLYPA------------------LPNESSTS--------------- 191
+ LSE PSLY + LP + + S
Sbjct: 350 SWV--QSTLSEERPSLYASHSSLTSSTLGEEDSCPSPLPPDLTPSIYEEKLDQITREDSQ 407
Query: 192 ------SEVGSLPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYT-LRKLLHHFPRTY 244
S+ S PSE LDK +SC+PGLSKR Y QL+N GF+T +RKLL HFPR+Y
Sbjct: 408 MKVRMESQSNSTPSEL----FLDKSVSCIPGLSKRHYQQLDNYGFHTVVRKLLLHFPRSY 463
Query: 245 ADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNID 304
A+LQNA +DDGQY IF+G+++SSRG+KA SFSFLEV+VGC++A++E S E V ID
Sbjct: 464 ANLQNAHAKIDDGQYLIFVGKVLSSRGVKANFSFSFLEVVVGCQVAESE--SAPEHVTID 521
Query: 305 SGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYN 364
+K +YLHLKKFFRG+RFT FLK++ K++ G+ VCVSGKVR MR+ +HYEMREYN
Sbjct: 522 V--QKTVYLHLKKFFRGSRFTFKAFLKNLAEKYQEGDIVCVSGKVRTMRAKDHYEMREYN 579
Query: 365 IDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFG 424
IDVL+D DLS AK RPYPIYPSKG LN LRDTIARALQALP N DP+PK+IT++FG
Sbjct: 580 IDVLEDGKDLSFFAKERPYPIYPSKGRLNPIFLRDTIARALQALPVNVDPIPKDITEQFG 639
Query: 425 LLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKY 484
L L DAY GIH+PK I+EADLARKRLIFDEFFY+QLGRL+QMLE LG+Q EK+ LLDKY
Sbjct: 640 LPSLHDAYFGIHKPKDINEADLARKRLIFDEFFYVQLGRLFQMLESLGSQMEKDVLLDKY 699
Query: 485 RKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCG 544
R+P NA E WSSLTKK+L LPY+LT+SQ A+SEIIWDL++PVPMNRLLQGDVGCG
Sbjct: 700 RRPVNNAVCTEQWSSLTKKVLDVLPYTLTTSQQLAVSEIIWDLQRPVPMNRLLQGDVGCG 759
Query: 545 KTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTP 604
KTVVAFLAC+EVIGSGYQAAFMVPTELLA QHYEHLLKLL+N++E KP +ALLTGSTP
Sbjct: 760 KTVVAFLACIEVIGSGYQAAFMVPTELLAIQHYEHLLKLLENLDEVVFKPTVALLTGSTP 819
Query: 605 VKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYY 664
+KQSRMIRK +QTG+I++VIGTHSLIA+ VEF+ALR+ +VDEQ RFGV+QRGRFNSKLY
Sbjct: 820 LKQSRMIRKGIQTGEISMVIGTHSLIADSVEFAALRITVVDEQHRFGVIQRGRFNSKLYC 879
Query: 665 TSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIP 724
S +S M +D S K D +MAPHVLAMSATPIPRTLALALYGDM++TQITDLPPGRIP
Sbjct: 880 ASSNSNMEDAITDDSSKSDAYMAPHVLAMSATPIPRTLALALYGDMTMTQITDLPPGRIP 939
Query: 725 IKTYIIEGNEKGYENVYK 742
++T+IIEGN+KG E+VYK
Sbjct: 940 VQTFIIEGNDKGLEDVYK 957
>gi|449445431|ref|XP_004140476.1| PREDICTED: uncharacterized protein LOC101221994 [Cucumis sativus]
Length = 1544
Score = 822 bits (2123), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/707 (59%), Positives = 513/707 (72%), Gaps = 67/707 (9%)
Query: 87 SVVMGYDSLNDLFKYGRADK----DAMDDFDISLACKRFPCITLGSTPPVGLYD------ 136
S VM +D + +Y D +D D+S ACK+FP I LGS+PPV L+D
Sbjct: 633 SDVMAHDDCIENGQYNNRSNSIPSDPDEDCDVSKACKKFPSIKLGSSPPVELFDGSTCHS 692
Query: 137 ------ETKAGGSEMKSLLADQSCEAVVSNPMDAELRVDRFGLSEAWPSLYPALPN-ESS 189
E K+G K+ + +CE + +D L SLYP LP+ E+S
Sbjct: 693 DIVSFLEAKSG----KNFFLNSTCEECEQDSLDGTLS-----------SLYPVLPDVENS 737
Query: 190 TSSEVGSLPSEASIEPL----------------------------------LDKCISCVP 215
+ E +LP+ +S+ P+ LD+ + C+
Sbjct: 738 SVREEYTLPTGSSLLPINIETGTILSNPTVDGDSSKKKSESENKGVSGRSFLDQSVGCIS 797
Query: 216 GLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAG 275
GLSKR QLE+ GF+T KLLHHFPRTYADL+N Q+ +DDGQY IFIG+++SSRG++A
Sbjct: 798 GLSKRHQRQLEDSGFHTASKLLHHFPRTYADLRNPQVHIDDGQYIIFIGKVLSSRGIRAS 857
Query: 276 CSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEG 335
SFSFLEV+V CEIA+ E+ SG V+ +G KKKIYLHLKKFFRG RFT PFL S+
Sbjct: 858 YSFSFLEVVVCCEIAERESHSGC-TVDDSTGGKKKIYLHLKKFFRGNRFTFKPFLSSLGE 916
Query: 336 KHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNAS 395
KHK GE VCVSGKVR M S +HYEMREYNIDVL+DE ++ L AK RPYPIYPSK G + +
Sbjct: 917 KHKEGEVVCVSGKVRTMPSEDHYEMREYNIDVLQDEKNVPLYAKERPYPIYPSKRGSSPT 976
Query: 396 LLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDE 455
LRD IAR + ALP N DP+P++ITQ FGLL L DAY GIH+P I EADLARKRL+FDE
Sbjct: 977 FLRDIIARGIDALPINVDPIPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDE 1036
Query: 456 FFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSS 515
FFYLQL RL+QMLEGLGT+ EK+ LLDKYR+P LNAAYM+ W+ LT+K L+ALPYSLT S
Sbjct: 1037 FFYLQLARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAYLTQKFLKALPYSLTVS 1096
Query: 516 QLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQ 575
Q+ AI+EIIWDLK+P+PMNRLLQGDVGCGKT+VAFLACMEVIG+GYQAAFMVPTELLA Q
Sbjct: 1097 QMKAIAEIIWDLKRPIPMNRLLQGDVGCGKTIVAFLACMEVIGTGYQAAFMVPTELLAIQ 1156
Query: 576 HYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVE 635
HYEHLL LL+NME ++KP +ALLTGST KQSRMIR+ LQ+G+ +LVIGT SLI+EKVE
Sbjct: 1157 HYEHLLGLLENMEGVENKPSVALLTGSTSSKQSRMIREGLQSGETSLVIGTQSLISEKVE 1216
Query: 636 FSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSA 695
FSALR+A+VDEQ RFGVVQRG+F SKL+ S+SS +A ++DG+ + MAPHVLAMSA
Sbjct: 1217 FSALRIAVVDEQHRFGVVQRGKFGSKLFNNSISSKIAAEHADGTSSGNFSMAPHVLAMSA 1276
Query: 696 TPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYK 742
TPIPRTLALALYG+MSLT ITDLPPGR+P+KTY I GN++G+E VY+
Sbjct: 1277 TPIPRTLALALYGEMSLTHITDLPPGRVPVKTYSIVGNDEGFEKVYE 1323
>gi|3785974|gb|AAC67321.1| putative ATP-dependent DNA helicase RECG [Arabidopsis thaliana]
Length = 845
Score = 767 bits (1981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/666 (59%), Positives = 482/666 (72%), Gaps = 57/666 (8%)
Query: 107 DAMDDF-----------DISLACKRFPCITLGSTPPVGLYDETKAGGSEMKSLLADQSCE 155
D +DDF D+ LACKRFP I LG + PV LY +K+ G E S+L +
Sbjct: 4 DNVDDFIDKKSDEQVKKDLVLACKRFPSIILGDSRPVELYSNSKSYG-ESSSILKTPTDN 62
Query: 156 AVVSNPMDAELRVDRFGLSEAWPSLYPAL--------PNE------SSTSSEVGSLPSEA 201
+ + PM D LS S P L P E SS +S+ + EA
Sbjct: 63 SFLPTPMHGGW-FDPDNLSRTLSSFCPELLQNDDSSDPREDILDDGSSFTSKTATSEVEA 121
Query: 202 S------IEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLD 255
+ + L I +PGLSKR +QL++CGF+T++KLLHHFPRTYADLQNAQ+D++
Sbjct: 122 TSDDVFAAQRFLATSIDSMPGLSKRHSNQLDSCGFHTMKKLLHHFPRTYADLQNAQVDIE 181
Query: 256 DGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHL 315
DGQY IF+G+++SS+G++A SFSFLEVIV CE++ + T D N + K I+LHL
Sbjct: 182 DGQYLIFVGKVLSSKGVRASSSFSFLEVIVSCEVSGRDRTPEDLSHNAEDKAGKSIFLHL 241
Query: 316 KKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLS 375
KKFFRGTRFT PFL SI+ KHKVG+ VC+SGKV+++R+ +H+EMREYNIDVLKDE++ S
Sbjct: 242 KKFFRGTRFTWQPFLNSIQEKHKVGDLVCISGKVKSLRAEDHFEMREYNIDVLKDEEESS 301
Query: 376 LRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGI 435
RA+GRPYPIYPSKGGLN L D I+RAL+ LPAN DP+PKEIT+ FGL L DAY+GI
Sbjct: 302 HRAQGRPYPIYPSKGGLNPKFLSDVISRALRVLPANMDPIPKEITKVFGLPSLNDAYVGI 361
Query: 436 HQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYME 495
H+PK +DEADLARKRLIFDEFFYLQL RLYQML+ LGT+ EK+ LL+K+RKP LN+ Y+E
Sbjct: 362 HEPKTLDEADLARKRLIFDEFFYLQLARLYQMLQSLGTKIEKDVLLEKFRKPVLNSVYIE 421
Query: 496 GWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
WS+LTK L+ALPYSLT SQLSA+SEIIWDLK+PVPMNRLLQGDVGCGKTVVAFLACME
Sbjct: 422 EWSTLTKSFLKALPYSLTPSQLSAVSEIIWDLKRPVPMNRLLQGDVGCGKTVVAFLACME 481
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
VIGSGYQAAFM PTELLA QHYE LL+NME DL
Sbjct: 482 VIGSGYQAAFMAPTELLAIQHYEQCRDLLENME------------------------GDL 517
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
Q+G I+ +IGTHSLIAEK+E+SALR+A+VDEQQRFGV+QRG+FNSKLY TSM S +
Sbjct: 518 QSGAISFIIGTHSLIAEKIEYSALRIAVVDEQQRFGVIQRGKFNSKLYGTSMISKSGSSD 577
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
SD + K D MAPHVLAMSATPIPR+LALALYGD+SLTQIT +P GRIP++T+I EGNE
Sbjct: 578 SDDTSKADLSMAPHVLAMSATPIPRSLALALYGDISLTQITGMPLGRIPVETHIFEGNET 637
Query: 736 GYENVY 741
G + VY
Sbjct: 638 GIKEVY 643
>gi|222623538|gb|EEE57670.1| hypothetical protein OsJ_08114 [Oryza sativa Japonica Group]
Length = 946
Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/732 (51%), Positives = 493/732 (67%), Gaps = 36/732 (4%)
Query: 40 MRFSNLLLPKIPKICSRSKHKYAECMLKLVEPYDESSIPQPKLLKKASVVMGYDSLNDLF 99
MR SN L K+ + CSR H +L++ + + + KLL K SV+MGY + +L
Sbjct: 1 MRSSNALGSKLFRWCSRENHTSVRKLLEV-----DGTSERSKLLNKVSVLMGYSNTQELI 55
Query: 100 KYGRADKDAMDDF-------DISLACKRFPCITLGSTPPVGLYDETKAGGSEMKSLLADQ 152
+ RA + + + + C +FPCI +G + P+ LY A S+ +++L++
Sbjct: 56 EQERARRGSATELISVCKEIEFPEMCAKFPCIKIGDSSPIELY-AAAASMSQKETVLSEN 114
Query: 153 SCEAVVS---------------NPMDAEL-RVDRFGLSE------AWPSLYPALPNESST 190
+ +P+D L VD +SE + SL PA+ ++
Sbjct: 115 LTNFMRESGGNFGAAYEFSDKCHPLDPTLTNVDHLSISEESSLTAQFVSLEPAVDTDACP 174
Query: 191 SSEVGSLPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNA 250
S + + S +LD+ I C PG + R Y QLE+ GF+T+RKLL HFPRTYADLQN
Sbjct: 175 ES-LAVADATVSDSSILDRSIRCFPGTTSRQYRQLEDGGFHTVRKLLQHFPRTYADLQNP 233
Query: 251 QIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKK 310
Q +++GQY + G ++SSRG + + +LEV+V C I ++E +S + N + QKK
Sbjct: 234 QGSIEEGQYIMLFGTVVSSRGARLKHTLGYLEVVVSCSIIESELSSSVKSCNSQAEQKKT 293
Query: 311 IYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKD 370
I+LHLKKFF GTRF+S FLK I K+K G+ VSGK++ + +HY++REY ID+L++
Sbjct: 294 IHLHLKKFFSGTRFSSPSFLKCISSKYKEGDLAYVSGKIKKALTKDHYDLREYTIDMLEE 353
Query: 371 EDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFD 430
E+ +PYPIYPSK GL SLL +I+RAL+ L + DP+P E+ EF L LFD
Sbjct: 354 EEQQCTLLDRKPYPIYPSKAGLKPSLLSLSISRALKMLTPDIDPMPHEVLVEFNLPNLFD 413
Query: 431 AYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLN 490
AYMGIH+PK+ DEAD AR+RLIFD+FFYLQLGRL+QMLE +GT+ EKE LL K + LN
Sbjct: 414 AYMGIHKPKNRDEADFARRRLIFDDFFYLQLGRLFQMLEAVGTRVEKEELLLKCKNHELN 473
Query: 491 AAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAF 550
A + WS L +KLL+ LPY LT SQL+A+ EIIWDL++PVPMNRLLQGDVGCGKTVVAF
Sbjct: 474 AVGADEWSPLARKLLKVLPYLLTPSQLNAVKEIIWDLRRPVPMNRLLQGDVGCGKTVVAF 533
Query: 551 LACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRM 610
LACMEVI SG+QAAFMVPTE+LA QHYEHL LL+ + D+ KP IALLTGST ++SR+
Sbjct: 534 LACMEVISSGFQAAFMVPTEVLALQHYEHLTSLLEKFDGDECKPNIALLTGSTSTRESRI 593
Query: 611 IRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSG 670
IR L+TG+I +VIGTHSLI +K EFSALR++++DEQQRFGVVQRGRFNSKLY S S
Sbjct: 594 IRNGLKTGEIAMVIGTHSLIGDKTEFSALRISVIDEQQRFGVVQRGRFNSKLYTPSTKSS 653
Query: 671 MAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
SD + + MAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGR PI+T +
Sbjct: 654 DDDTISDENSASEIFMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRQPIETLAL 713
Query: 731 EGNEKGYENVYK 742
EGN+ G+E+V++
Sbjct: 714 EGNDAGFESVFQ 725
>gi|357143281|ref|XP_003572867.1| PREDICTED: ATP-dependent DNA helicase recG-like [Brachypodium
distachyon]
Length = 1009
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/716 (48%), Positives = 462/716 (64%), Gaps = 88/716 (12%)
Query: 87 SVVMGYDSLNDLFKYGRADKDA-----MDDFDISLACKRFPCITLGSTPPVGLYDET--- 138
SV+MGY + + R +++ + + D + +FPCI +G + P+ LYD +
Sbjct: 101 SVLMGYSNAKYFSEQERVRRESELISVLKEIDFAEISVKFPCIKIGDSSPIELYDVSARM 160
Query: 139 ----------------KAGGS-EMKSLLADQ----------------SCEA-VVSNPMDA 164
++GG+ E LAD+ S E+ V+S+ +
Sbjct: 161 ECKDITLSENITNFMVESGGNLETNRELADKHHPLRPPLTYASDLSVSEESLVISSHISH 220
Query: 165 ELRVDRFGLSEAWP-SLYPAL-PNESSTSSEVGSLPSEASIE----------------PL 206
EL VD E P SL A P+ + V LP E +++ +
Sbjct: 221 ELAVD----GEVCPESLADATTPDCNDLDKSVRCLPGELAVDREACPESLADATSPEGNI 276
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
LD+ I +PG + R Y QLE+ GF+T+ KLL HFPRTYADLQN Q ++DGQY +F G +
Sbjct: 277 LDQSIRSLPGTTSRQYRQLEDGGFHTIHKLLQHFPRTYADLQNPQGLIEDGQYIMFFGTV 336
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
SSRG+K + EV+V C + +TE+ S N + +KK I+LHLK+F+RG RF+S
Sbjct: 337 KSSRGIKLKSTLGLFEVVVACSVIETESGSSAVSSNSGAEKKKMIHLHLKQFYRGMRFSS 396
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
FL+ + K+ G+ V VSGK++ +++HY+++E+ ID+L++E+ S +PYPIY
Sbjct: 397 QRFLQRVSSKYSEGDLVYVSGKIKKALASDHYDIKEFTIDMLEEEEQQSTLLDKKPYPIY 456
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL 446
PSK G++AS LR +I+RAL+ L + D +P E+ EF L LFDAYMGIH+PK DEAD
Sbjct: 457 PSKAGVDASSLRRSISRALKLLTPDIDSIPPEVLVEFNLANLFDAYMGIHKPKSRDEADF 516
Query: 447 ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLR 506
AR+RLIFD+FFYLQL RL+QMLE +GT+ EKE LL K + LNA ++GWS L KKLL+
Sbjct: 517 ARRRLIFDDFFYLQLARLFQMLEAVGTRVEKEELLSKCKINELNAIGVDGWSPLAKKLLK 576
Query: 507 ALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFM 566
ALPYSLT SQL+A+ EIIWDL++PVPMNRLLQGDVGCGKTVVA+LACMEVI SG+QAAFM
Sbjct: 577 ALPYSLTPSQLNAVKEIIWDLRRPVPMNRLLQGDVGCGKTVVAYLACMEVINSGFQAAFM 636
Query: 567 VPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGT 626
VPTE+LA QHYEHL LLD + KDL+TG+I +VIGT
Sbjct: 637 VPTEILAVQHYEHLSSLLDKFD------------------------KDLKTGEIAMVIGT 672
Query: 627 HSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHM 686
H+LIA+K +FSALR++++DEQQRFGV+QRGRFNSKLY +S G + + + + M
Sbjct: 673 HTLIADKTDFSALRISVIDEQQRFGVIQRGRFNSKLYTSSTKPGDENTSPNEASDSETFM 732
Query: 687 APHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYK 742
APHVLAMSATPIPRTLALALYGDMSLTQITDLPPGR PI+T +EGN+ G+E V++
Sbjct: 733 APHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRQPIETLALEGNDAGFETVFQ 788
>gi|357438679|ref|XP_003589616.1| ATP-dependent DNA helicase recG [Medicago truncatula]
gi|355478664|gb|AES59867.1| ATP-dependent DNA helicase recG [Medicago truncatula]
Length = 618
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 316/603 (52%), Positives = 388/603 (64%), Gaps = 67/603 (11%)
Query: 14 CFGGKQLRCAIILKAGRGCRNVLGTNMRFSNLLLPKIPKICSRSKHKYAECMLKLVEPYD 73
C KQLR I+ + G N T MR N L K K+C R KHK+ + K+VE
Sbjct: 23 CMSCKQLRTVILFQGKTGYSNPFSTKMRCCNFLPFKFSKMCYRMKHKFTD--QKVVEIDQ 80
Query: 74 ESSIPQPKLLKKASVVMGYDSLNDLFKYGRAD-------KDAMDDFDISLACKRFPCITL 126
KL KK +M ++ + DL G + KDA+DDFDISL C+ FP ITL
Sbjct: 81 HGVKSTVKLRKKVFALMDHN-IPDLIGNGSGEMKSKMNRKDAVDDFDISLMCRIFPSITL 139
Query: 127 GSTPPVGLYDETKA--------GGSEMKSLLADQSCEAVVSNPMDAELRVDRF------- 171
GS P VGLYD T A G + + L D S + S+P+ + D F
Sbjct: 140 GSAPQVGLYDGTTAYSETNIISGTKDFEQHLYDSS---LTSSPLRKD---DSFPCPLTPQ 193
Query: 172 GLSEAWPSLYPALPNESSTSSEVGSLPSEASI---EPLLDKCISCVPGLSKRLYHQLENC 228
+S + + E S +VG L S++++ E LD ++C+PGL+K+ QL+NC
Sbjct: 194 SVSSIYEEKLDQVTREDS-QKKVG-LQSQSNLTLNELSLDTSVNCLPGLTKKQREQLDNC 251
Query: 229 GFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCE 288
GF+TLRKLLHHFPR+YA+LQNA ++ DGQY +F+GE++SSRG++A CS S LEVIVGC+
Sbjct: 252 GFHTLRKLLHHFPRSYANLQNAHGNIYDGQYLMFVGEVLSSRGVRANCSISLLEVIVGCQ 311
Query: 289 IADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGK 348
IAD E S E V G+ + +YLHLK+FFRGTRFT FL SI K++V + CVSGK
Sbjct: 312 IADKE--SDIEHVTDKVGKTRTVYLHLKRFFRGTRFTFKGFLNSIANKYQVRDIACVSGK 369
Query: 349 ----------------VRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGL 392
V+ M + +HYE+RE+NIDVL+D DLSL AK RPY IYPSKGGL
Sbjct: 370 TFGRGCCSRSRHAAILVKTMPAKDHYEIREFNIDVLEDGKDLSLCAKERPYCIYPSKGGL 429
Query: 393 NASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFD-------------AYMGIHQPK 439
N + LRD IARAL ALP DP+PK+I +EFGLL L D AY GIH+PK
Sbjct: 430 NPTFLRDIIARALHALPVIVDPIPKDIREEFGLLSLHDVSISFRSIYSIDEAYFGIHKPK 489
Query: 440 HIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSS 499
I EADLARKRLIFDEFFYLQLG+L+QMLEGLGTQ EK GLLDKYR+P N + WS
Sbjct: 490 DISEADLARKRLIFDEFFYLQLGQLFQMLEGLGTQVEKIGLLDKYRRPENNTVCTKEWSC 549
Query: 500 LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
LTKK+L LPY+LTS QL A+SEIIWDLK+PVPMNRLLQGDVGCGKT+VAFLACMEVIGS
Sbjct: 550 LTKKVLELLPYTLTSGQLQAVSEIIWDLKRPVPMNRLLQGDVGCGKTIVAFLACMEVIGS 609
Query: 560 GYQ 562
GYQ
Sbjct: 610 GYQ 612
>gi|389607233|dbj|BAM17499.1| RecG [Physcomitrella patens subsp. patens]
Length = 1152
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 322/843 (38%), Positives = 447/843 (53%), Gaps = 127/843 (15%)
Query: 6 AVSQSCGMCFG-------GKQLRCAIILKAGRGCRNVLGTNMRFSNLLLPKIPKICSRSK 58
++SQ C G GK L+ AI+ +A G NV G RF L ++ + S +
Sbjct: 111 SLSQVCTSSEGEVVVVDDGKLLK-AIVYEAQHGFSNVSGLASRFGEFLYAQL-SLRSATG 168
Query: 59 HKYAECMLKLVEPYDE-SSIPQPKLLKKASVVMGYDSLNDLFKYGRADKDA---MDDF-- 112
+ YDE S+ + +LL K + MG+ + DLF + A ++A + D
Sbjct: 169 GNVFSSLENDARRYDELDSVNRAQLLDKVAQAMGFLNTQDLFAHHIALREASIGLQDLSK 228
Query: 113 ---DISLAC-----------------------KRFPC-ITLGSTPPVGLYDET---KAGG 142
+I A K FP I GS+ P+ LY T K G
Sbjct: 229 YSSEIPTATTATVTQEEAPDSNHNSNKSAPFSKSFPSSIKFGSSEPIMLYKSTVDGKGKG 288
Query: 143 SEMKSLL------ADQSCEAVVSNPMDAELRVDRFGLSEAWPSLYPALPNESSTSSEVGS 196
S K + + ++ E+ D +R + + + L ++ +++GS
Sbjct: 289 STTKLKVNAKIAKSSETIESQTKGSNDKAVRQTKQKFARNSVATASTLDARITSIADIGS 348
Query: 197 LPSE--------ASIEP-----------------LLDKCISCVPGLSKRLYHQLENCGFY 231
+ +S+E +LD + V LS +LE GF+
Sbjct: 349 SDTHNRESDFVSSSVEINSTELMLMRGAANYKDCVLDIPLKFVKNLSVYQRTRLEENGFH 408
Query: 232 TLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIAD 291
TLR LL HFPRTY + Q A ++DGQ+ F+G I+SSRG++ S +EVIV ++ D
Sbjct: 409 TLRMLLQHFPRTYVNFQQAGQRVEDGQHLSFVGTIMSSRGLRLSPSLGAIEVIVKSKV-D 467
Query: 292 TETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRA 351
+ + I S K ++LHLKKFFRG RFT+ FL + K+ V V V GKV+A
Sbjct: 468 AQDPYDEHSDEIKSQHGKTVFLHLKKFFRGARFTTSWFLNKMAAKYPVHSQVSVGGKVKA 527
Query: 352 MRSNNHYEMREYNIDVL-----------KDEDDLSLRAKGRPYPIYPSKGGLNASLLRDT 400
+ +H+E+REYN+++ DE L L G+PYP+YPSKGGL L
Sbjct: 528 LPREDHFEIREYNLELWDQDSNDSTLDGSDEVKLELEMVGKPYPVYPSKGGLQPKTLEFC 587
Query: 401 IARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQ 460
I R L LP + DP+PK I ++ + L AY GIH P+ +A+ AR+RL+FDEF+YLQ
Sbjct: 588 IQRLLPTLPLDLDPLPKHIREKHRTVELRQAYFGIHTPQDAKDAEQARQRLVFDEFYYLQ 647
Query: 461 --------------LGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLR 506
LG L G ++G LD ME WS LT KL++
Sbjct: 648 LGLLLQRQQLANKYLGDFKPSLVG------EDGTLD-----------MERWSPLTLKLVK 690
Query: 507 ALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFM 566
+LPY+LT++Q A SEI+WDL++PVPM+RLLQGDVGCGKTVVAFL +EVI +GYQ A M
Sbjct: 691 SLPYTLTNAQKKAASEIMWDLQRPVPMSRLLQGDVGCGKTVVAFLGLVEVIDAGYQGALM 750
Query: 567 VPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGT 626
PTE LA QHY+ ++ L+ + ED +P++ALLTGS P ++R+IR L++G+I L +GT
Sbjct: 751 APTEFLAIQHYKRIMGWLEFL-EDHERPRVALLTGSIPAAKARIIRNGLESGEIALAVGT 809
Query: 627 HSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSM---SSGMAMVNSDGSPKDD 683
HSLI++ V F+ L LA+VDEQ RFGV QRGR NSK + G + S S +
Sbjct: 810 HSLISDSVRFANLGLAVVDEQHRFGVAQRGRLNSKARENGVVLSGVGTELTESRDSEAEG 869
Query: 684 QHM----APHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYEN 739
APHVLAMSATPIPRTLALA++GDMS++QIT+LPPGR T + NEKG
Sbjct: 870 ASAVLLGAPHVLAMSATPIPRTLALAMHGDMSISQITELPPGRPKTTTLTFQSNEKGRRE 929
Query: 740 VYK 742
VYK
Sbjct: 930 VYK 932
>gi|302811380|ref|XP_002987379.1| hypothetical protein SELMODRAFT_446963 [Selaginella moellendorffii]
gi|300144785|gb|EFJ11466.1| hypothetical protein SELMODRAFT_446963 [Selaginella moellendorffii]
Length = 975
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 274/737 (37%), Positives = 402/737 (54%), Gaps = 72/737 (9%)
Query: 23 AIILKAGRGCRNVLGTNMRFSNLLLPKIPKICSRSKH--KYAECMLKLVE---PYDESSI 77
AI+ +A +G N G+ +FS+ L ++ R + K E + L + Y +
Sbjct: 74 AIVYEATKGFCNSAGSTRKFSDFLRSQLSIHAERGERDLKSFEVIQNLAQDAQSYGQMDC 133
Query: 78 PQP-KLLKKASVVMGYDSLNDLFKYGRADKDAMDDFDISLACKRFPCITLGSTPPVGLYD 136
Q +LL + + + G+ D+ + A +A D KR P D
Sbjct: 134 EQRIQLLDRVAQIQGFSCARDIVDHEIAVVEASQDLTHENCVKR----DEAKQKP----D 185
Query: 137 ETKAGGSEMKSLLADQSCEAVVSNPMDAELRVDRFGLSEAWPSLYPALPNESSTSSEVGS 196
KA S KSLL D EL PS + P+ S + V S
Sbjct: 186 VNKAIQSSSKSLL-------------DVELP----------PSKEQSQPSPSQRTKGVSS 222
Query: 197 LPSEAS----IEP-----LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADL 247
L +AS I+ LD IS + + QL+ GFYT R LL+HFPR +
Sbjct: 223 LLYQASETRSIDTENERWKLDTLISDMKCFTPYQRSQLQENGFYTARSLLNHFPRAHVSF 282
Query: 248 QNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQ 307
++ L+DGQ G I+ +R K + + LEVIV C+IA D+ V+
Sbjct: 283 ESPTDTLEDGQSVALFGTIVMTRASKIKDTLAMLEVIVNCKIAQECLRPCDDEVD----- 337
Query: 308 KKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDV 367
+ ++LH+K+FF+G RFTS FL + G VSGKV+AM +H+ ++EY + V
Sbjct: 338 ENTVFLHIKRFFQGPRFTSSWFLNKTASGYPEGSKAAVSGKVKAMNRKSHFLLKEYAVKV 397
Query: 368 LKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLC 427
++ ED LR G YP+Y SKG LN ++ I R L+ LP + DP+P E+ ++ LL
Sbjct: 398 IEGEDFDQLRNDGEAYPVYSSKGLLNPKKIQAFIQRLLKGLPTDIDPLPTEMRDKYDLLS 457
Query: 428 LFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKP 487
+ AY +HQP ++ A++AR+R++FD++FYLQL L Q G+ E +DK
Sbjct: 458 IEQAYSTLHQPTNLQGANVARRRIVFDDYFYLQLAFLLQRNCLRGSTVNNELEMDK---- 513
Query: 488 RLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTV 547
WSSL+ K+L ALP+ LT+ Q+ A SEI+WDL+Q PM+RLLQGDVGCGKT+
Sbjct: 514 ---------WSSLSLKVLNALPFKLTAGQIKAASEIMWDLRQQAPMSRLLQGDVGCGKTI 564
Query: 548 VAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQ 607
VAFLA ++V+ SGYQAA M PT+ + +QHY+ L L+ ++E K +PKIALL+GS +
Sbjct: 565 VAFLALLDVVSSGYQAALMAPTDFVVSQHYKQFLSWLEVLDE-KDRPKIALLSGSLSAGE 623
Query: 608 SRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSM 667
+R++R+ + +I+L++GTH+LI+ F AL LA++DEQ RFGV QR R T+
Sbjct: 624 ARLVREGIANREISLILGTHALISNSTNFPALGLAVIDEQHRFGVGQRDRLK-----TAH 678
Query: 668 SSGMAMVNSDGSPKDDQHMAP--HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
+S + D + + +A HVL MSATPIPR+LAL +GDMSL+QI ++PPGR P+
Sbjct: 679 ASEAVEPDLDDADLERARLASTTHVLLMSATPIPRSLALTCHGDMSLSQINEIPPGRQPV 738
Query: 726 KTYIIEGNEKGYENVYK 742
TY++ +E G Y+
Sbjct: 739 DTYVLPDDEGGRRRAYE 755
>gi|302796276|ref|XP_002979900.1| hypothetical protein SELMODRAFT_444354 [Selaginella moellendorffii]
gi|300152127|gb|EFJ18770.1| hypothetical protein SELMODRAFT_444354 [Selaginella moellendorffii]
Length = 931
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 272/737 (36%), Positives = 399/737 (54%), Gaps = 74/737 (10%)
Query: 23 AIILKAGRGCRNVLGTNMRFSNLLLPKIPKICSRSKH--KYAECMLKL---VEPYDESSI 77
AI+ +A +G N G+ +FS+ L ++ R + K E + L + Y +
Sbjct: 32 AIVYEATKGFCNSAGSTRKFSDFLRSQLSIHAERGERDLKSFEVIQNLAQDAQSYGQMDC 91
Query: 78 PQP-KLLKKASVVMGYDSLNDLFKYGRADKDAMDDFDISLACKRFPCITLGSTPPVGLYD 136
Q +LL + + + G+ D+ + A +A D KR P D
Sbjct: 92 EQRIQLLDRVAQIQGFSCARDIVDHEIAVVEASQDLSHENCVKR----DEAKQKP----D 143
Query: 137 ETKAGGSEMKSLLADQSCEAVVSNPMDAELRVDRFGLSEAWPSLYPALPNESSTSSEVGS 196
KA S KSLL E PS + P+ S + V S
Sbjct: 144 VNKAIQSSSKSLL-------------------------ELPPSKEQSQPSPSQRTKSVSS 178
Query: 197 LPSEA----SIEP-----LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADL 247
L +A SI+ LD IS + + QL+ GFYT R LL+HFPR +
Sbjct: 179 LLYQASETRSIDTENERWKLDTLISDMKCFTPYQRSQLQENGFYTARSLLNHFPRAHVSF 238
Query: 248 QNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQ 307
++ L+DGQ G I+ +R K + + LEVIV C+IA D+ V+
Sbjct: 239 ESPTDTLEDGQSVALFGTIVMTRASKIKDTLAMLEVIVNCKIAQECLRPCDDEVD----- 293
Query: 308 KKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDV 367
+ ++LH+K+FF+G RFTS FL + G VSGKV+AM +H+ ++EY + V
Sbjct: 294 ENTVFLHIKRFFQGPRFTSSWFLNKTASGYPEGSKAAVSGKVKAMNRKSHFLLKEYAVKV 353
Query: 368 LKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLC 427
+ ED LR G YP+Y SKG LN ++ I R L+ LP + DP+P E+ ++ LL
Sbjct: 354 IDGEDFDQLRNDGEAYPVYSSKGLLNPKKIQVFIQRLLKGLPTDIDPLPTEVRDKYDLLS 413
Query: 428 LFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKP 487
+ AY +HQP ++ A++AR+R++FD++FYLQL L Q G+ E +DK
Sbjct: 414 IEQAYSTLHQPTNLQGANVARRRIVFDDYFYLQLAFLLQRNCLRGSTVNNELEMDK---- 469
Query: 488 RLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTV 547
WSSL+ K+L ALP+ LT+ Q+ A SEI+WDL+Q PM+RLLQGDVGCGKT+
Sbjct: 470 ---------WSSLSLKVLNALPFKLTAGQIKAASEIMWDLRQQAPMSRLLQGDVGCGKTI 520
Query: 548 VAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQ 607
VAFLA ++V+ SGYQAA M PT+ + +QHY+ L L+ ++E K +PKIALL+GS +
Sbjct: 521 VAFLALLDVVSSGYQAALMAPTDFVVSQHYKQFLSWLEVLDE-KDRPKIALLSGSLSAGE 579
Query: 608 SRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSM 667
+R++R+ + +I+L++GTH+LI+ F AL LA++DEQ RFGV QR R T+
Sbjct: 580 ARLVREGIANREISLILGTHALISNSTNFPALGLAVIDEQHRFGVGQRDRLK-----TAH 634
Query: 668 SSGMAMVNSDGSPKDDQHMAP--HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
+S + D + + +A HVL MSATPIPR+LAL +GDMSL+QI ++PPGR P+
Sbjct: 635 ASEAVEPDLDDADLERARLASTTHVLLMSATPIPRSLALTCHGDMSLSQINEIPPGRQPV 694
Query: 726 KTYIIEGNEKGYENVYK 742
TY++ +E G Y+
Sbjct: 695 DTYVLPDDEGGRRRAYE 711
>gi|413938513|gb|AFW73064.1| hypothetical protein ZEAMMB73_328005 [Zea mays]
Length = 530
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/310 (69%), Positives = 253/310 (81%), Gaps = 1/310 (0%)
Query: 433 MGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAA 492
MGIH+PK EAD AR+RLIFD+FFYLQLGRL+QMLE +GT+ EKE LL K + LN
Sbjct: 1 MGIHKPKDRSEADFARRRLIFDDFFYLQLGRLFQMLEAVGTRVEKEELLYKCKSHELNTV 60
Query: 493 YMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLA 552
++ WS LTKKLLRALPY LT SQL A+ EIIWDL++PVPMNRLLQGDVGCGKT+VAFLA
Sbjct: 61 GVDDWSPLTKKLLRALPYWLTPSQLDAVQEIIWDLRRPVPMNRLLQGDVGCGKTIVAFLA 120
Query: 553 CMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIR 612
CMEV+ SG+QAAFMVPTE+LA QHYEHL LL+ + D+ KP IALLTGST ++SR+IR
Sbjct: 121 CMEVVNSGFQAAFMVPTEVLAVQHYEHLTSLLEKFDGDE-KPNIALLTGSTSTRESRIIR 179
Query: 613 KDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMA 672
L+TG+I +VIGTH LIA+K EFSALR++++DEQQRFGVVQRGRFNSKLY +S
Sbjct: 180 DGLKTGEIGMVIGTHCLIADKTEFSALRISVIDEQQRFGVVQRGRFNSKLYTSSSKLSGE 239
Query: 673 MVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEG 732
+SD + + MAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGR PIKT +EG
Sbjct: 240 NTSSDEASDSETFMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRQPIKTLALEG 299
Query: 733 NEKGYENVYK 742
N+ G+E V++
Sbjct: 300 NDVGFEAVFQ 309
>gi|357462167|ref|XP_003601365.1| ATP-dependent DNA helicase recG [Medicago truncatula]
gi|355490413|gb|AES71616.1| ATP-dependent DNA helicase recG [Medicago truncatula]
Length = 565
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 260/600 (43%), Positives = 320/600 (53%), Gaps = 137/600 (22%)
Query: 53 ICSRSKHKYAECMLKLVEPYDESSIPQPKLLKKASVVMGYDSLNDLFKYGRAD------- 105
+C R KHK+ + K+VE KL KK +M ++ + DL G +
Sbjct: 1 MCYRMKHKFTD--QKVVEIDQHGVKSTVKLRKKVFALMDHN-IPDLIGNGSGEMKSKMNR 57
Query: 106 KDAMDDFDISLACKRFPCITLGSTPPVGLYDETKAGGSEMKSLLADQSCEAVVSNPMDAE 165
KDA+DDFDISL C+ FP ITLGS P VGLYD T A S ++S D E
Sbjct: 58 KDAVDDFDISLMCRIFPSITLGSPPQVGLYDGTTA-----------YSETNIISETKDFE 106
Query: 166 LRVDRFGLSEAWPSLYPALPNESSTSSEVGSLPSEASI---EPLLDKCISCVPGLSKRLY 222
+ S E S +VG L S++++ E LD ++C+PGL+K+
Sbjct: 107 --------QHLYDSRKIGFTREDS-QKKVG-LQSQSNLTLNELSLDTSVNCLPGLTKKQR 156
Query: 223 HQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSF-- 280
QL+NCGF+TLRKLLHHFPR+YA+LQNA ++ DGQY +F+GE++SSR + G SF+F
Sbjct: 157 EQLDNCGFHTLRKLLHHFPRSYANLQNAHGNIYDGQYLMFVGEVLSSRFFR-GTSFTFKG 215
Query: 281 -LEVIVG-CEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHK 338
L I ++ D SG Y L+ F F + +
Sbjct: 216 FLNSIANKYQVRDIACVSGKVSFFFYLSSLTHFYAVLQVF----NVDEFIFPEVLRCSLS 271
Query: 339 VGEFVCVSG----------KVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPS 388
G+ V G +V+ M + HYE+RE+NIDVL+D DLSL AK RPY IYPS
Sbjct: 272 GGDVVLGQGMLQFSLPTLARVKTMPAKGHYEIREFNIDVLEDGKDLSLCAKERPYCIYPS 331
Query: 389 KGGLNASLLRDTIAR--------------------------------------------- 403
KGGLN + LRD IAR
Sbjct: 332 KGGLNPTFLRDIIARLGLETICSMERTSLVPVRDGGPCGFDIAIQTGDWRRQKQELGRQR 391
Query: 404 --------ALQALPANFDPVPKEITQEFGLLCLFD-------------AYMGIHQPKHID 442
AL ALP DP+PK+I +EFGLL L D AY GIH+PK I
Sbjct: 392 LKQKVELKALHALPVIVDPIPKDIREEFGLLSLHDVSISFRSIYSIDEAYFGIHKPKDIS 451
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
EADLARKRLIFDEFFYLQLG+L+QMLEGLGTQ EKE WS LTK
Sbjct: 452 EADLARKRLIFDEFFYLQLGQLFQMLEGLGTQVEKE------------------WSCLTK 493
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
K+L LPY LTS QL A+SEIIWDLK+PVPM+RLLQGDVGCGKT+VAFLACMEVIGSGYQ
Sbjct: 494 KVLELLPYPLTSGQLQAVSEIIWDLKRPVPMSRLLQGDVGCGKTIVAFLACMEVIGSGYQ 553
>gi|218191448|gb|EEC73875.1| hypothetical protein OsI_08657 [Oryza sativa Indica Group]
Length = 541
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/283 (67%), Positives = 229/283 (80%)
Query: 460 QLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSA 519
+LGRL+QMLE +GT+ EKE LL K + LNA + WS L +KLL+ LPY LT SQL+A
Sbjct: 38 RLGRLFQMLEAVGTRVEKEELLLKCKNHELNAVGADEWSPLARKLLKVLPYLLTPSQLNA 97
Query: 520 ISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEH 579
+ EIIWDL++PVPMNRLLQGDVGCGKTVVAFLACMEVI SG+QAAFMVPTE+LA QHYEH
Sbjct: 98 VKEIIWDLRRPVPMNRLLQGDVGCGKTVVAFLACMEVISSGFQAAFMVPTEVLALQHYEH 157
Query: 580 LLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSAL 639
L LL+ + D+ KP IALLTGST ++SR+IR L+TG+I +VIGTHSLI +K EFSAL
Sbjct: 158 LTSLLEKFDGDECKPNIALLTGSTSTRESRIIRNGLKTGEIAMVIGTHSLIGDKTEFSAL 217
Query: 640 RLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIP 699
R++++DEQQRFGVVQRGRFNSKLY S S SD + + MAPHVLAMSATPIP
Sbjct: 218 RISVIDEQQRFGVVQRGRFNSKLYTPSTKSSDDDTISDENSASEIFMAPHVLAMSATPIP 277
Query: 700 RTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYK 742
RTLALALYGDMSLTQITDLPPGR PI+T +EGN+ G+E+V++
Sbjct: 278 RTLALALYGDMSLTQITDLPPGRQPIETLALEGNDAGFESVFQ 320
>gi|449522181|ref|XP_004168106.1| PREDICTED: ATP-dependent DNA helicase RecG-like [Cucumis sativus]
Length = 513
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 151/209 (72%), Positives = 182/209 (87%)
Query: 534 NRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHK 593
+ +L+GDVGCGKT+VAFLACMEVIG+GYQAAFMVPTELLA QHYEHLL LL+NME ++K
Sbjct: 84 DTILKGDVGCGKTIVAFLACMEVIGTGYQAAFMVPTELLAIQHYEHLLGLLENMEGVENK 143
Query: 594 PKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVV 653
P +ALLTGST KQSRMIR+ LQ+G+ +LVIGT SLI+EKVEFSALR+A+VDEQ RFGVV
Sbjct: 144 PSVALLTGSTSSKQSRMIREGLQSGETSLVIGTQSLISEKVEFSALRIAVVDEQHRFGVV 203
Query: 654 QRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLT 713
QRG+F SKL+ S+SS +A ++DG+ + MAPHVLAMSATPIPRTLALALYG+MSLT
Sbjct: 204 QRGKFGSKLFNNSISSKIAAEHADGTSSGNFSMAPHVLAMSATPIPRTLALALYGEMSLT 263
Query: 714 QITDLPPGRIPIKTYIIEGNEKGYENVYK 742
ITDLPPGR+P+KTY I GN++G+E VY+
Sbjct: 264 HITDLPPGRVPVKTYSIVGNDEGFEKVYE 292
>gi|434387453|ref|YP_007098064.1| ATP-dependent DNA helicase RecG [Chamaesiphon minutus PCC 6605]
gi|428018443|gb|AFY94537.1| ATP-dependent DNA helicase RecG [Chamaesiphon minutus PCC 6605]
Length = 835
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 200/569 (35%), Positives = 305/569 (53%), Gaps = 81/569 (14%)
Query: 184 LPNESSTSSEVG--SLPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFP 241
+P++ + + +V ++P LD+ + +P L R L G T++ +L+++P
Sbjct: 113 IPSKPTANLKVAPATIPVRGDTNLTLDRYLRDIPKLGIRKAEILARLGLLTVKDVLYYYP 172
Query: 242 RTYADL--QNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDE 299
R + D Q I+L+ G +G + +F ++ E T DE
Sbjct: 173 RDHIDYAKQINIIELEPGTTVTLVGIV---------RKINFFTSPKNKKLNVLELTIKDE 223
Query: 300 VVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYE 359
+GQ L + +F+ GTR++S + +S++ K+ VG ++ SG V+ + + +
Sbjct: 224 -----TGQ-----LKISRFYAGTRYSSRGWQESLKRKYPVGSWIAASGLVKQGKYGINLD 273
Query: 360 MREYNIDVLKDED-DLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKE 418
E I+VL D D +S GR P+YP G++A ++R+ + L A DP+PK
Sbjct: 274 NPE--IEVLADADASISSLKIGRVLPVYPLIEGVSADVVREAVVTVLPAAEQLTDPLPKV 331
Query: 419 ITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQ--MLEGLGTQ-- 474
+ +++GL+ L + IH P+ D + AR+RLIFDEFFYLQLG L + ++ + TQ
Sbjct: 332 VREQYGLMELAASIQNIHFPEDSDTKEAARRRLIFDEFFYLQLGFLQRRHLMRQVHTQAI 391
Query: 475 FEKEG-LLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPM 533
G L+D++R+ LP+ LT++Q +SEI+ DL+ P PM
Sbjct: 392 ITPTGVLIDRFRE--------------------LLPFQLTNAQQRVVSEILSDLQLPAPM 431
Query: 534 NRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHK 593
NRL+QGDVG GKTVVA LA + I SGYQ A M PTE+LA QHY L+ + + H
Sbjct: 432 NRLVQGDVGSGKTVVAVLAILAAIQSGYQTALMAPTEVLAEQHYRKLVGWFNLL----HL 487
Query: 594 PKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVV 653
P + LLTGST + R I +L+TG++++ +GTH+LI +KV F L L ++DEQ RFGV
Sbjct: 488 P-VELLTGSTKAAKRRQIYSELETGELSIAVGTHALIQDKVNFRNLGLVVIDEQHRFGVF 546
Query: 654 QRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLT 713
QR + K GS PHVL M+ATPIPRTLAL L+GD+ ++
Sbjct: 547 QRAKLQQK----------------GS-------QPHVLTMTATPIPRTLALTLHGDLDVS 583
Query: 714 QITDLPPGRIPIKTYIIEGNEKGYENVYK 742
QI +LP GR PI+T + N + VY+
Sbjct: 584 QIDELPAGRQPIQTNAV--NSRQRSQVYE 610
>gi|428225934|ref|YP_007110031.1| ATP-dependent DNA helicase RecG [Geitlerinema sp. PCC 7407]
gi|427985835|gb|AFY66979.1| ATP-dependent DNA helicase RecG [Geitlerinema sp. PCC 7407]
Length = 857
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 204/557 (36%), Positives = 292/557 (52%), Gaps = 69/557 (12%)
Query: 185 PNESSTSSEVGSLPSEA--SIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPR 242
P + S SL A S++P D+ ++ + G+ + +L G T+R LL ++PR
Sbjct: 138 PAKKIKSPRTASLVESAAPSLDP--DQALTYLKGVGPKNAERLAKLGLLTVRDLLFYYPR 195
Query: 243 TYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCS-FSFLEVIVGCEIADTETTSGDEVV 301
+ D Q+ + D + GE ++ G C+ F+ + ++A E T D
Sbjct: 196 DHLDYAK-QVRIRD----LVAGETVTIVGTVRRCNCFTSPK---NNKLAILEITLRD--- 244
Query: 302 NIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMR 361
SGQ + L F G RFTS + + + G + SG V+ S + +
Sbjct: 245 --SSGQ-----IRLSWFRPGHRFTSRAWQEQQRRSYPPGTTLAASGLVK--ESKYGFTLE 295
Query: 362 EYNIDVLK-DEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEIT 420
E I+VL ED + GR PIYP G+ A L+R + +AL A+ D +P ++
Sbjct: 296 EAQIEVLSHSEDTIESLTVGRIVPIYPLTEGVPADLVRRAVLQALPAVAQLQDALPADLR 355
Query: 421 QEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGL 480
Q++GL+ L +A IH P + AR+RLIFDEFFYLQLG L + + Q
Sbjct: 356 QQYGLISLKEAIAHIHFPPDREALAQARRRLIFDEFFYLQLGLLMRRVSQRREQ------ 409
Query: 481 LDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGD 540
+A + L + L LP+ LT +Q +++I+ D+ QP PMNRL+QGD
Sbjct: 410 ---------ASAILAPTGDLHQTFLEILPFQLTGAQDRVVNDILNDMGQPFPMNRLVQGD 460
Query: 541 VGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLT 600
VG GKTVVA LA + I +GYQAAFM PTE+LA QHY L+ + M H P + LLT
Sbjct: 461 VGSGKTVVAVLAILAAIEAGYQAAFMAPTEVLAEQHYRKLVSWFNLM----HLP-VELLT 515
Query: 601 GSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNS 660
GST + R I LQTG++ +++GTH+LI + V F L LA++DEQ RFGV QR R
Sbjct: 516 GSTKAAKRRQIHAHLQTGELPVLVGTHALIQDAVSFHKLGLAVIDEQHRFGVQQRARLQQ 575
Query: 661 KLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPP 720
K GS PHVL M+ATPIPRTLAL L+GD+ ++QI +LPP
Sbjct: 576 K----------------GS-------NPHVLTMTATPIPRTLALTLHGDLDVSQIDELPP 612
Query: 721 GRIPIKTYIIEGNEKGY 737
GR PI+T + G ++ +
Sbjct: 613 GRQPIQTTALTGGDRAH 629
>gi|170078462|ref|YP_001735100.1| ATP-dependent DNA helicase RecG [Synechococcus sp. PCC 7002]
gi|169886131|gb|ACA99844.1| ATP-dependent DNA helicase [Synechococcus sp. PCC 7002]
Length = 822
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 209/641 (32%), Positives = 312/641 (48%), Gaps = 100/641 (15%)
Query: 121 FPCITLGSTPPVGLYDETKAGGSEMKSLLADQSCEAVVSNPMDAELRVDRFGLSEAWPSL 180
F C++ G+ PP G+ + + AD + DR L
Sbjct: 34 FLCLSFGAVPPAGIDPDQRRRWQGFAQKFADYPVATLG----------DRRLLVAGARRF 83
Query: 181 YPALPNESSTSSEVG---SLPSEASI------------EPLLDKCISCVPGLSKRLYHQL 225
L E S++ LP S+ LD+ + +PG+ + +QL
Sbjct: 84 LQQLKQELEQPSQIAPKAKLPRTQSVCESNVKSSTYGKRISLDQPLMYLPGIGPKRSNQL 143
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIV 285
G T+R L ++PR + D Q+ + D ++AG + + + +V
Sbjct: 144 AKLGLETVRDALFYYPRQHIDYAK-QVKITD---------------LEAGETVTLVGHVV 187
Query: 286 GCEIADTETTSGDEVVNI---DSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEF 342
C I + + + DS + K L +F+ GTR+++ + + ++ ++ G
Sbjct: 188 RCNIFTSPKNQKLSIFELWLRDSSGRIK----LSRFYAGTRYSNRGWQEKMKRQYPQGVA 243
Query: 343 VCVSGKVRAMRSNNHYEMREYN--IDVLKDED-DLSLRAKGRPYPIYPSKGGLNASLLRD 399
+ SG V+ N Y + N I+VL D+ GR P+YP G+ A L+R
Sbjct: 244 IAASGLVK----KNKYGLTLDNPEIEVLDSSGADIKSLKIGRVLPVYPLTEGVPADLIRK 299
Query: 400 TIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYL 459
+ +L A+ D P ++ GL+ L +A IH P++ + AR+RL+FDEFFYL
Sbjct: 300 VVINSLPAIAQLKDAFPTAFREQHGLMKLQEAIANIHFPENAEILQQARQRLVFDEFFYL 359
Query: 460 QLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSA 519
QLG L + + +Q +A L K+ + LP+ LT++Q
Sbjct: 360 QLGFLQRRQQEKASQ---------------KSAVFIPQGELIKRFEKLLPFQLTNAQQRV 404
Query: 520 ISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEH 579
I+EI+ DL Q PMNRL+QGDVG GKTVVA A + I SGYQAA M PTE+LA QHY
Sbjct: 405 ITEILADLAQSTPMNRLVQGDVGAGKTVVAVFAILAAIQSGYQAALMAPTEVLAEQHYRK 464
Query: 580 LLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSAL 639
L+ + + H P + LLTGST K+ R I LQTG++ +++GTH+LI + V+F L
Sbjct: 465 LVGWFNLL----HLP-VELLTGSTKTKKRREIHSQLQTGELKVLVGTHALIEDPVQFQNL 519
Query: 640 RLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIP 699
L ++DEQ RFGV QRGR +K APHVL M+ATPIP
Sbjct: 520 GLVVIDEQHRFGVQQRGRLLAK-----------------------GKAPHVLTMTATPIP 556
Query: 700 RTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE--KGYE 738
R+LAL L+GD+ ++QI +LPPGR PI T +I+G + K YE
Sbjct: 557 RSLALTLHGDLDVSQIDELPPGRQPIDTRVIKGGDRHKAYE 597
>gi|254414435|ref|ZP_05028201.1| ATP-dependent DNA helicase RecG [Coleofasciculus chthonoplastes PCC
7420]
gi|196178665|gb|EDX73663.1| ATP-dependent DNA helicase RecG [Coleofasciculus chthonoplastes PCC
7420]
Length = 826
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 190/546 (34%), Positives = 291/546 (53%), Gaps = 69/546 (12%)
Query: 199 SEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQ 258
S+ ++ LD +S +P + +R L G YT+R +L+++PR + D Q+++ D
Sbjct: 121 SKVNVNFTLDSPLSELPDIGRRRSDYLGRLGVYTVRDMLYYYPRDHIDYAR-QVNVKD-- 177
Query: 259 YFIFIGEIISSRGMKAGCSFSFLEVIVGCEIA--DTETTSGDEVVNIDSGQKKKIYLHLK 316
+ GE ++ G C+ C + + + + + ++ +GQ L L
Sbjct: 178 --LVAGETVTVVGTVKRCN---------CFTSPRNKKLSIFELLIKDSTGQ-----LKLN 221
Query: 317 KFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNI-DVLKDEDDLS 375
+FF G RF+ + + + ++ G V SG V+ + + E + D L D S
Sbjct: 222 RFFAGNRFSHRGWQEQQKRRYPAGAIVAASGLVKKNKYGITLDTPEIEVLDHLGGSID-S 280
Query: 376 LRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGI 435
L+ GR P+YP G+ A +R + AL A+ +P+PK + Q++ L+ + DA +
Sbjct: 281 LKI-GRVMPVYPLTEGVPADWVRQAVMAALPAVNQLQEPLPKGMRQQYDLMGVSDAIANL 339
Query: 436 HQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYME 495
H P D AR+RL+FDEFFYLQLG L + K ++ ++A +
Sbjct: 340 HFPTDTDTLSRARRRLVFDEFFYLQLGFLQRR---------------KMQQQVQSSAILA 384
Query: 496 GWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
L + + LP+ LTS+Q +++I+ DL+QP PMNRL+QGDVG GKTVVA +A +
Sbjct: 385 PTGKLIDRFYQLLPFELTSAQKRVVNDILNDLQQPTPMNRLVQGDVGSGKTVVAVIAILA 444
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
I SGYQAA M PTE+LA QHY L+ + + H P + LLTGS VK+ R I L
Sbjct: 445 AIQSGYQAALMAPTEVLAEQHYRKLVSWFNLL----HLP-VELLTGSVKVKKRREIHSQL 499
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
+TG++ L++GTH+LI + V F L L ++DEQ RFGV QR + K
Sbjct: 500 ETGELPLLVGTHALIQDPVNFQRLGLVVIDEQHRFGVEQRAQLQQK-------------- 545
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
+PHVL ++ATPIPRTLAL L+GD+ ++QI +LPPGR I T ++ G E+
Sbjct: 546 ---------GQSPHVLTLTATPIPRTLALTLHGDLDVSQIDELPPGRQNIHTSVLTGKER 596
Query: 736 GYENVY 741
+N Y
Sbjct: 597 --QNAY 600
>gi|428204262|ref|YP_007082851.1| ATP-dependent DNA helicase RecG [Pleurocapsa sp. PCC 7327]
gi|427981694|gb|AFY79294.1| ATP-dependent DNA helicase RecG [Pleurocapsa sp. PCC 7327]
Length = 822
Score = 299 bits (766), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 215/637 (33%), Positives = 324/637 (50%), Gaps = 86/637 (13%)
Query: 121 FPCITLGSTPPVGLYDETKAGGSEMKSLLADQSCEAVVSNPMDAELRVDRFGLS-----E 175
F C++ G PPVG + E +L + + + L RF E
Sbjct: 36 FLCLSFGQAPPVGTPGSERRRWQEF-ALRFARYPQLPPAQRQSLVLEARRFLYDLRQTLE 94
Query: 176 AWPSL-YPALPNESSTSSEVGSLPSEASIEPLLDKCISCVPGLSKRLYHQLEN-CGFYTL 233
+ P L P LP T +G+ + + LD I + + + LE G T+
Sbjct: 95 SSPELSQPKLPR---TKPALGNSKTASDCFVSLDDPIGTLAEVGRIRGKSLEERLGLRTV 151
Query: 234 RKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIA--D 291
R LL ++PR + D Q+++ + GE ++ G C+ C + +
Sbjct: 152 RDLLFYYPRDHIDYAR-QVNI----AHLVAGETVTVIGTVRRCN---------CFTSPKN 197
Query: 292 TETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRA 351
++ T + ++ +GQ K L +FF GTRFT+ + ++ + ++ +G V SG V+
Sbjct: 198 SKLTIFELLIRDKTGQIK-----LNRFFAGTRFTNRGWQENQKRQYPLGSVVAASGLVK- 251
Query: 352 MRSNNHY--EMREYNIDVLKDEDDLSLRAK--GRPYPIYPSKGGLNASLLRDTIARALQA 407
N Y + + I+VL D S+ + GR P+YP G+ A ++R + A+ A
Sbjct: 252 ---KNKYGLTLEDPEIEVL-DSLGASIESLKIGRVLPVYPLSEGITADVVRKAVIGAMGA 307
Query: 408 LPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQM 467
+ +P+P + ++GLL L DA IH P +D AR+RL+F+EFFYLQLG L++
Sbjct: 308 ISQIKEPLPVSLRNQYGLLGLKDAIANIHFPTDVDILGHARRRLVFEEFFYLQLGFLHRR 367
Query: 468 LEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDL 527
+ T+ +A L +KL + +P+SLT++Q I EI+ DL
Sbjct: 368 HQQRQTE---------------KSAIFTPSGQLIEKLNQIIPFSLTNAQKRVIGEILADL 412
Query: 528 KQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNM 587
PMNRL+QGDVG GKT+VA A + I SGYQAA M PTE+LA QHY ++ + +
Sbjct: 413 NSSTPMNRLVQGDVGSGKTIVAVFAILAAIQSGYQAAMMAPTEVLAEQHYRKIVSWFNLL 472
Query: 588 EEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQ 647
H P + LLTGST V + R I LQTG++ L+IGTH+LI + V F L L ++DEQ
Sbjct: 473 ----HLP-VELLTGSTKVSKRREIHAQLQTGELPLLIGTHALIQDPVNFRRLGLVVIDEQ 527
Query: 648 QRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALY 707
RFGV QR R SK +PHVL+M+ATPIPRTLAL ++
Sbjct: 528 HRFGVQQRARLLSK-----------------------GQSPHVLSMTATPIPRTLALTMH 564
Query: 708 GDMSLTQITDLPPGRIPIKTYIIEGNEK--GYENVYK 742
GD+ ++QI +LPPGR PI+T ++ G E+ YE + +
Sbjct: 565 GDLDVSQIDELPPGRQPIQTTVLSGRERSQAYELIRR 601
>gi|218438140|ref|YP_002376469.1| ATP-dependent DNA helicase RecG [Cyanothece sp. PCC 7424]
gi|218170868|gb|ACK69601.1| ATP-dependent DNA helicase RecG [Cyanothece sp. PCC 7424]
Length = 818
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 213/635 (33%), Positives = 317/635 (49%), Gaps = 85/635 (13%)
Query: 121 FPCITLGSTPPVGLYDETKAGGSEMKSLLADQSCEAVVSNPMDAELRVDRFGLSEAWPSL 180
F C+ G +PP+G + + EM + + +S L RF L E +L
Sbjct: 35 FICLNFGQSPPIGTPLDDRRRWQEMGVKFS-HYPQLTLSQRQQLVLETRRF-LQELKQTL 92
Query: 181 Y----PALPNESSTSSEVGSLPSEASIEPL-LDKCISCVPGLSKRLYHQLENCGFYTLRK 235
P P T+ +P I P+ LD+ +S + + R L G T++
Sbjct: 93 ETPLDPPAPKVPKTAPVTHQIPQ---IRPITLDQPLSALVEVGYRKSDLLARLGLKTVQD 149
Query: 236 LLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIA--DTE 293
+L ++PR + D Q+ + + + GE ++ G C+ C + + +
Sbjct: 150 ILFYYPRDHIDYAR-QVSITN----LVAGETVTIVGTVKRCN---------CFTSPKNKQ 195
Query: 294 TTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMR 353
+ + ++ +GQ K L +FF GTRFT+ + + + + VG V SG V+ +
Sbjct: 196 LSIFELLIKDSTGQIK-----LNRFFAGTRFTNRGWQERQKRLYPVGSVVAASGLVK--Q 248
Query: 354 SNNHYEMREYNIDVLKDEDDLSLRAK----GRPYPIYPSKGGLNASLLRDTIARALQALP 409
+ + + I+VL D L + GR P+YP G+ A L+R + AL AL
Sbjct: 249 NKYGFTLENPEIEVL---DSLGSHIESLKIGRVLPVYPLTEGVPADLVRKAVIEALGALH 305
Query: 410 ANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLE 469
DP+P ++ E+GL+ L +A IH P++ D AR+RL+FDEFF+LQLG L + E
Sbjct: 306 QLKDPLPVDLRNEYGLIKLKEAIANIHFPENPDILTHARRRLVFDEFFFLQLGFLQRRQE 365
Query: 470 GLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQ 529
TQ +A +K LP+ LT++Q I EI+ DLK
Sbjct: 366 QKQTQ---------------KSASFNPRGEFIEKFNHLLPFPLTNAQERVIGEILEDLKS 410
Query: 530 PVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEE 589
PMNRL+QGDVG GKT+V A + I SGYQAA M PTE+LA QHY L+ + +
Sbjct: 411 FTPMNRLVQGDVGSGKTIVGVFAILAAIQSGYQAALMAPTEVLAEQHYRKLVGWFNLL-- 468
Query: 590 DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQR 649
H P + LLTGST V + R I L+ G++ L++GTH+LI + V F L L ++DEQ R
Sbjct: 469 --HLP-VELLTGSTKVAKRREIHSQLENGELPLLVGTHALIQDPVNFRNLGLVVIDEQHR 525
Query: 650 FGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGD 709
FGV QR R +K APHVL M+ATPIPRTLAL ++GD
Sbjct: 526 FGVQQRARLLAK-----------------------GQAPHVLTMTATPIPRTLALTIHGD 562
Query: 710 MSLTQITDLPPGRIPIKTYIIEGNEK--GYENVYK 742
+ ++QI +LPPGR PI+T ++ G E+ YE + +
Sbjct: 563 LDVSQIDELPPGRQPIQTTVLTGKERTQAYELIRR 597
>gi|428769810|ref|YP_007161600.1| ATP-dependent DNA helicase RecG [Cyanobacterium aponinum PCC 10605]
gi|428684089|gb|AFZ53556.1| ATP-dependent DNA helicase RecG [Cyanobacterium aponinum PCC 10605]
Length = 828
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 209/625 (33%), Positives = 321/625 (51%), Gaps = 75/625 (12%)
Query: 121 FPCITLGSTPPVG------LYDETKAGGSEMKSLLADQSCEAVVSNPMDAELRVDRFGLS 174
F C+T G TPPV + ET A S L E +++ ++ V ++
Sbjct: 39 FLCLTFGDTPPVTNLLVAFRWQET-AKKFARYSHLTILEREDLINQTLNLIGEVKEMIVN 97
Query: 175 EAWPSLYPALPNESSTSSEVGSLPSEASIEPL---LDKCISCVPGLSKRLYHQLENCGFY 231
+ P +P S + PS S+ P+ LD ++ + +S R L+
Sbjct: 98 K--PYYHPVAEEVKSLAVAEVKPPSNTSVAPVTLKLDDPVTLLKAISLRQGELLKKLQIV 155
Query: 232 TLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCS-FSFLEVIVGCEIA 290
T+R LL ++PR + D Q+++ D + GE ++ G C FS
Sbjct: 156 TIRDLLFYYPRDHIDY-GRQVNIKD----LVAGETVTIVGKIKKCDCFSS---------P 201
Query: 291 DTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVR 350
+ + ++ ID + KI +FF G +++ + + ++ + V SG V+
Sbjct: 202 KNKKLTIFSLIIIDRTGEVKI----SRFFAGNFYSNRGWQEKMKRQFPRNAIVAASGLVK 257
Query: 351 AMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPA 410
+ E E+ + + + SL+ GR P+YP G+ A ++R+ + A+ ALP
Sbjct: 258 QNKYGITLENPEFEVLNSQGGNINSLKI-GRLLPVYPLTDGIPADVIRNGVMEAMVALPQ 316
Query: 411 NFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEG 470
DP+P + Q++GL+ L +A IH P+ D+ AR+RLIFDEFFYLQLG L + E
Sbjct: 317 ISDPLPVILKQQYGLMELQEAIARIHYPEDQDQLSHARRRLIFDEFFYLQLGFLQRRQE- 375
Query: 471 LGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQP 530
+KE + P N +E ++ + LP+SLT++Q I EII DL+ P
Sbjct: 376 -----QKESRIAVSFTP--NGRLIEEFNQI-------LPFSLTNAQKRVIEEIIKDLQSP 421
Query: 531 VPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEED 590
PMNRL+QGDVG GKT+VA A + + SGYQ A M PTE+LA QHY ++ + +
Sbjct: 422 SPMNRLVQGDVGAGKTIVAVFAILTALQSGYQGALMAPTEVLAEQHYRKIVGWFNLL--- 478
Query: 591 KHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRF 650
H P + LLTGST + R I L++G++ L+IGTH+LI + V+F L L ++DEQ RF
Sbjct: 479 -HLP-VELLTGSTKTAKRRQIHGQLESGELPLLIGTHALIQDPVQFRNLGLVVIDEQHRF 536
Query: 651 GVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDM 710
GV QR + SK +PHVL+M+ATPIPRTLAL L+GD+
Sbjct: 537 GVQQRAKLLSK-----------------------GRSPHVLSMTATPIPRTLALTLHGDL 573
Query: 711 SLTQITDLPPGRIPIKTYIIEGNEK 735
++QI +LPPGR PI+T ++ G ++
Sbjct: 574 DVSQIDELPPGRQPIQTTVLTGKQR 598
>gi|354567489|ref|ZP_08986658.1| ATP-dependent DNA helicase RecG [Fischerella sp. JSC-11]
gi|353542761|gb|EHC12222.1| ATP-dependent DNA helicase RecG [Fischerella sp. JSC-11]
Length = 837
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 183/540 (33%), Positives = 278/540 (51%), Gaps = 73/540 (13%)
Query: 202 SIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFI 261
++ P LD+ + +P + R +L G YT+R LL ++PR + D
Sbjct: 135 TLAPKLDQKLKDLPEIGLRKAEKLARLGLYTVRDLLFYYPRDHIDYARQ----------- 183
Query: 262 FIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNI---DSGQKKKIYLHLKKF 318
+S ++AG + + + + C ++ ++ + D+ K KI +F
Sbjct: 184 -----VSISELEAGETVTIVATVKSCNCRTSQKNQKLTILELLLRDNTGKIKI----NRF 234
Query: 319 FRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHY--EMREYNIDVLKDE-DDLS 375
F GTRFTS + +S++ ++ VG V G V+ N Y + + ++VL + D +
Sbjct: 235 FAGTRFTSRAWQESLKRRYPVGSIVAACGLVKG----NKYGLTLEDPELEVLANPGDTIE 290
Query: 376 LRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGI 435
GR P+Y G+ A L+R + AL DP+P + +++ L+ L DA I
Sbjct: 291 SLTIGRVVPVYALTEGVGADLVRQAMIAALPTAAHLKDPLPSGLRRKYELMELKDAIANI 350
Query: 436 HQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYME 495
H P D AR+RL+FDEFFYLQLG L + + Q +A +
Sbjct: 351 HYPSDNDTLQHARRRLVFDEFFYLQLGLLQRQHQAKQIQ---------------TSAVLA 395
Query: 496 GWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
L K LP+ LT++Q I++I+ DL++PVPMNRL+QGDVG GKT+V +A +
Sbjct: 396 PRGQLLDKFYEILPFKLTNAQQRVINDILNDLQKPVPMNRLVQGDVGSGKTIVGVVAILA 455
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
I SGYQAA M PTE+LA QHY L+ + + + P + LLTGST + R I L
Sbjct: 456 AIQSGYQAALMAPTEVLAEQHYRKLVSWFNLL----YLP-VELLTGSTKTAKRRQIHAQL 510
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
+TG++ L++GTH+LI V+F L L ++DEQ RFGV QR + K
Sbjct: 511 ETGELPLLVGTHALIQNPVKFHRLGLVVIDEQHRFGVEQRAKLQQK-------------- 556
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
PHVL M+ATPIPRTLAL ++GD+ ++QI +LPPGR I+T ++ ++
Sbjct: 557 ---------GEQPHVLTMTATPIPRTLALTIHGDLDVSQIDELPPGRQKIQTTVLTSQQR 607
>gi|414079128|ref|YP_007000552.1| ATP-dependent DNA helicase RecG [Anabaena sp. 90]
gi|413972407|gb|AFW96495.1| ATP-dependent DNA helicase RecG [Anabaena sp. 90]
Length = 821
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 199/579 (34%), Positives = 297/579 (51%), Gaps = 73/579 (12%)
Query: 164 AELRVDRFGLSEAWPSLYPALPNESSTSSEVGSLPSEAS--IEPLLDKCISCVPGLSKRL 221
AE+R L + + P + ES + +E S + P LDK + +P + R
Sbjct: 79 AEVRRYLNQLQQELETGEPQINYESKNQHPTTPIVAEVSKRLAPTLDKQLRDLPEIGIRK 138
Query: 222 YHQLENCGFYTLRKLLHHFPRTYADL--QNAQIDLDDGQYFIFIGEIISSRGMKAGCSFS 279
L YT+R LL ++PR + D Q +L+ G+ I + F+
Sbjct: 139 SENLGRLNLYTVRDLLFYYPRDHIDYARQVNISELEGGETVTIIATV---------KRFN 189
Query: 280 FLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKV 339
F +++ E D ++GQ K + +F+ G RF+S + +S++ + V
Sbjct: 190 FFTSPKNKKLSILELILKD-----NTGQIK-----VTRFYAGARFSSRGWQESLKRLYPV 239
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDE-DDLSLRAKGRPYPIYPSKGGLNASLLR 398
G + G V+ + + E ++VL + D + GR PIY G+ A+ +R
Sbjct: 240 GSMLAACGLVKGGKYGLTLDNPE--LEVLANPGDTIDSLTIGRVVPIYALTEGVMANTVR 297
Query: 399 DTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFY 458
+ AL A DP+PK + +++ L+ L DA IH PK D +AR+RL+FDEFFY
Sbjct: 298 QAMMIALTAAVNLKDPLPKGLREKYALMELKDAIPNIHFPKDSDSLKIARRRLVFDEFFY 357
Query: 459 LQLGRLYQMLEGLGTQFEKEGLLDKYRKPR--LNAAYMEGWSSLTKKLLRALPYSLTSSQ 516
LQLG LL + +K R +A + L ++ LP+ LT +Q
Sbjct: 358 LQLG-----------------LLQRQKKAREIQTSAILAPTGKLLEEFNEILPFQLTGAQ 400
Query: 517 LSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQH 576
++EI+ DL++PV MNRL+QGDVG GKTVVA +A + I SGYQAA M PTE+LA QH
Sbjct: 401 QRVVNEILTDLQKPVAMNRLVQGDVGSGKTVVAVIAILAAIQSGYQAALMAPTEVLAEQH 460
Query: 577 YEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEF 636
Y L+ + + H P + LLTGST + + R I L+TG++ L++GTH+LI +KV F
Sbjct: 461 YRKLVSWFNLL----HLP-VELLTGSTKIAKRREIHSQLETGELPLLVGTHALIQDKVNF 515
Query: 637 SALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSAT 696
L L ++DEQ RFGV QR + K PHVL M+AT
Sbjct: 516 QRLGLVVIDEQHRFGVQQRAKLQQK-----------------------GEQPHVLTMTAT 552
Query: 697 PIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
PIPRTLAL ++GD+ ++QI +LPPGR IKT ++ G ++
Sbjct: 553 PIPRTLALTVHGDLDVSQIDELPPGRQQIKTTMLSGQQR 591
>gi|428305692|ref|YP_007142517.1| ATP-dependent DNA helicase RecG [Crinalium epipsammum PCC 9333]
gi|428247227|gb|AFZ13007.1| ATP-dependent DNA helicase RecG [Crinalium epipsammum PCC 9333]
Length = 835
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 190/542 (35%), Positives = 285/542 (52%), Gaps = 77/542 (14%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
LD+ ++ V + R L YT+R LL ++PR + D Q+++ +
Sbjct: 138 LDQPLANVAEIGVRKGGYLTKLNLYTVRDLLFYYPRDHIDYAR-QVNISE---------- 186
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSG----DEVVNIDSGQKKKIYLHLKKFFRGT 322
++AG + + + I C T+ + + V+ SG+ K L +FF G
Sbjct: 187 -----LEAGETVTLVGKIKSCNCFTTQKNNKLTILELVITDQSGRIK-----LSRFFAGN 236
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYN--IDVLKD-EDDLSLRAK 379
R+++ + ++++ +++ G V SG V+ N Y + N I+VL ED +
Sbjct: 237 RYSNRGWQEALKRRYESGSIVAASGLVK----KNKYGLTLDNPEIEVLAHPEDTIDSLNI 292
Query: 380 GRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPK 439
GR P+YP G+ A ++R + L A DP+P I ++GL+ L DA IH P
Sbjct: 293 GRVVPVYPLTEGVPADMVRQAVTAVLPAAAQLKDPLPSVIRNQYGLVGLKDAIANIHFPS 352
Query: 440 HIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSS 499
+ AR+RL+FDEFFYLQLG L ++ L + + N+A +
Sbjct: 353 DSAAKEAARRRLVFDEFFYLQLGFL-----------QRRQALRQVQ----NSAILLPAGK 397
Query: 500 LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
L ++ + LP+ LT++Q I++I+ DL++P PMNRL+QGDVG GKTVVA +A + + S
Sbjct: 398 LIEEFEQILPFKLTNAQQRVINDILNDLQKPTPMNRLVQGDVGSGKTVVAVIAILAAVQS 457
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
GYQ A M PTE+LA QHY L+ + + H P + LLTGST + R I L+TG+
Sbjct: 458 GYQGALMAPTEVLAEQHYRKLVSWFNLL----HLP-VELLTGSTKTAKRRQIHAQLETGE 512
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
++L++GTH+LI + V F L L ++DEQ RFGV QR R SK
Sbjct: 513 LSLLVGTHALIQDPVNFHKLGLVVIDEQHRFGVHQRARLLSK------------------ 554
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYEN 739
PHVL M+ATPIPRTLAL L+GD+ ++QI +LPPGR I T + G E+ N
Sbjct: 555 -----GEQPHVLTMTATPIPRTLALTLHGDLDVSQIDELPPGRQAIYTTALTGKERN--N 607
Query: 740 VY 741
Y
Sbjct: 608 AY 609
>gi|126658566|ref|ZP_01729713.1| DNA recombinase [Cyanothece sp. CCY0110]
gi|126620153|gb|EAZ90875.1| DNA recombinase [Cyanothece sp. CCY0110]
Length = 819
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 208/630 (33%), Positives = 322/630 (51%), Gaps = 91/630 (14%)
Query: 121 FPCITLGSTPPVGLYDETKAGGSEMKSLLADQSCEAVV--------SNPMDAELRVDRFG 172
F C+ G++PP G + + AD S +V + ELR
Sbjct: 36 FLCLNFGNSPPNGTPTSDRRKWQNFAAQYADYSNLSVAQRKTLISQTRQFLYELRKTLET 95
Query: 173 LSEAWPSLYPALPNESSTSSEVGSLPSEASIEPL-LDKCISCVPGLSKRLYHQLENCGFY 231
SE P P LP ++ + + +AS+ P+ L++ +S + + + L+ G Y
Sbjct: 96 PSEPQP---PKLPKTTAITDK------KASLRPISLEQSLSTLAEVGYKRAELLKRLGLY 146
Query: 232 TLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIA- 290
T++ LL ++PR + D Q+ +++ + GE ++ G C+ C +
Sbjct: 147 TVKDLLFYYPRDHIDYAR-QVTINN----LVAGETVTIVGTVKRCN---------CFTSP 192
Query: 291 -DTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKV 349
+ + + + ++ +GQ K L +FF GTRFTS + + + + +G V SG V
Sbjct: 193 KNKKLSIFELILRDHTGQIK-----LNRFFAGTRFTSRGWQERQKRIYPLGSTVAASGLV 247
Query: 350 RAMRSNNHYEMREYN--IDVLKDEDDLSLRAK--GRPYPIYPSKGGLNASLLRDTIARAL 405
+ N Y + N I+VL D S+ + GR P+YP G+ A L+R I +L
Sbjct: 248 K----QNRYGITLDNPEIEVL-DSVGSSIESIKIGRVLPVYPLTEGVGADLIRKAIIVSL 302
Query: 406 QALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLY 465
+A+ DP+P+ + +++GL+ L +A IH P+ + AR+RL+FDEFFYLQLG L
Sbjct: 303 EAIKQLRDPLPRVLREQYGLMGLKEAISNIHFPETSELLAHARRRLVFDEFFYLQLGFLQ 362
Query: 466 QMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIW 525
+ E +K N+ L ++ LP+SLT++Q I+EI+
Sbjct: 363 RRQE---------------QKQIHNSTVFTPKGRLIEQFDNILPFSLTNAQQRVINEILE 407
Query: 526 DLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLD 585
DL PMNRL+QGDVG GKT+VA A + + SGYQAA M PTE+LA QHY L+ +
Sbjct: 408 DLNSVTPMNRLVQGDVGAGKTIVAVFAVLAALQSGYQAALMAPTEVLAEQHYRKLIPWFN 467
Query: 586 NMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVD 645
+ + P + LLTGST + I + L TG++ L++GTH+LI + V F L L ++D
Sbjct: 468 QL----YLP-VELLTGSTKKAKREEIHRQLITGELPLLVGTHALIQDTVNFQKLGLVVID 522
Query: 646 EQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALA 705
EQ RFGV QR + +K +PHVL M+ATPIPRTLAL
Sbjct: 523 EQHRFGVQQRAKLLAK-----------------------GKSPHVLTMTATPIPRTLALT 559
Query: 706 LYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
L+GD+ ++QI +LPPGR I+T ++ G E+
Sbjct: 560 LHGDLDVSQIDELPPGRQAIQTTVLTGKER 589
>gi|307151126|ref|YP_003886510.1| ATP-dependent DNA helicase RecG [Cyanothece sp. PCC 7822]
gi|306981354|gb|ADN13235.1| ATP-dependent DNA helicase RecG [Cyanothece sp. PCC 7822]
Length = 818
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 208/627 (33%), Positives = 308/627 (49%), Gaps = 85/627 (13%)
Query: 121 FPCITLGSTPPVGL-------YDETKAGGSEMKSLLADQSCEAVVSNPMDAELRVDRFGL 173
F C+ G +PP+G + E S L Q + V L+ R L
Sbjct: 35 FLCLNFGQSPPIGTSLDDRRRWQEMAVQFSRYPDLTLTQRQQLVAET--RRFLQDLRQTL 92
Query: 174 SEAWPSLYPALPNESSTSSEVGSLPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTL 233
P LP + + + + + + LD+ +S + + R L G T+
Sbjct: 93 ETPQEPPTPKLPKTAPVTHQ-----TSQTRQITLDQPLSALVEVGYRKSDLLARLGLKTV 147
Query: 234 RKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIA--D 291
+ LL ++PR + D Q+++ + + GE ++ G C+ C + +
Sbjct: 148 QDLLFYYPRDHIDYAR-QVNIAN----LVAGETVTIIGTVKRCN---------CFTSPKN 193
Query: 292 TETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRA 351
+ + + ++ +GQ K L +FF G RFT+ + + + + VG V SG V+
Sbjct: 194 KQLSIFELLIKDHTGQIK-----LNRFFAGNRFTNRGWQERQKRLYAVGSLVAASGLVK- 247
Query: 352 MRSNNHYEMREYN--IDVLKD-EDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQAL 408
N Y + N I+VL ++ GR P+YP G+ A L+R + A+ A+
Sbjct: 248 ---QNKYGLTLENPEIEVLDSLGSNIESLKIGRVLPVYPLTEGVPADLIRKAVIEAMGAI 304
Query: 409 PANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQML 468
DP+PK+I +GL+ L +A IH P+ + AR+RL+FDEFF+LQLG L +
Sbjct: 305 AQLKDPLPKDIQNSYGLIKLKEAIANIHYPETPEILAHARRRLVFDEFFFLQLGFLQRRQ 364
Query: 469 EGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLK 528
E TQ +A L +K LP++LT +Q I EI DLK
Sbjct: 365 EQKQTQ---------------KSASFNPRGELIEKFNEILPFALTGAQKRVIGEIQQDLK 409
Query: 529 QPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNME 588
PMNRL+QGDVG GKT+VA A + I SGYQAA M PTE+LA QHY L+ + +
Sbjct: 410 GTTPMNRLVQGDVGSGKTIVAVFAILAAIQSGYQAALMAPTEVLAEQHYRKLVGWFNLL- 468
Query: 589 EDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQ 648
H P + LLTGST V + R I L++G++ L++GTH+LI + V F L L ++DEQ
Sbjct: 469 ---HLP-VELLTGSTKVSKRREIHAQLESGELPLLVGTHALIQDPVNFRNLGLVVIDEQH 524
Query: 649 RFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYG 708
RFGV QR R +K APHVL M+ATPIPRTLAL ++G
Sbjct: 525 RFGVQQRARLLAK-----------------------GQAPHVLTMTATPIPRTLALTIHG 561
Query: 709 DMSLTQITDLPPGRIPIKTYIIEGNEK 735
D+ ++QI +LPPGR PI+T + G E+
Sbjct: 562 DLDVSQIDELPPGRQPIQTTALSGKER 588
>gi|427723468|ref|YP_007070745.1| ATP-dependent DNA helicase RecG [Leptolyngbya sp. PCC 7376]
gi|427355188|gb|AFY37911.1| ATP-dependent DNA helicase RecG [Leptolyngbya sp. PCC 7376]
Length = 822
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 207/631 (32%), Positives = 307/631 (48%), Gaps = 80/631 (12%)
Query: 121 FPCITLGSTPPVGLYDETKAGGSEMKSLLAD-QSCEAVVSNPMDAELR--VDRFGLSEAW 177
F C++ G PP L +T+ ++ A Q + AE R + +
Sbjct: 34 FLCLSFGEMPPPKLDLDTRRRWTDFAQKFAQYQGFTVSKRRVVVAETRSFLQQVKTQLET 93
Query: 178 PSLYPALPNESSTSSEVGSLPSEASIEP--LLDKCISCVPGLSKRLYHQLENCGFYTLRK 235
P P S +P AS + L++ + +P + + L G T+R
Sbjct: 94 PVNQPRKIKAPRAQSVQEKVPQRASYQKQITLEQPLMYLPKIGPKRSEHLAKLGLLTVRD 153
Query: 236 LLHHFPRTYADL--QNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTE 293
L ++PR + D Q +L+ G+ +G +I C I +
Sbjct: 154 ALFYYPREHIDYAKQVKITELEPGETVTLVGSVIR------------------CNIFTSP 195
Query: 294 TTSGDEVVNI---DSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVR 350
+ + DS + K L +F+ G RF++ + + + + G + SG V+
Sbjct: 196 KNKKLSIFELYMRDSSGRIK----LSRFYAGARFSNRGWQEKQKKMYPRGVAIAASGLVK 251
Query: 351 AMRSNNHYEMREYNIDVL-KDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALP 409
++ + I+VL DE D+ GR P+YP G+ A L+R + ++ AL
Sbjct: 252 --KTKYGLTLDNPEIEVLTSDEADIKSLKIGRVLPVYPLTEGVPADLIRKVVIASMAALK 309
Query: 410 ANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLE 469
DP P + +F L+ L +A IH P++ + AR+RL+FDEFFYLQLG L + E
Sbjct: 310 FLQDPFPSVLRDDFELMKLPEAIANIHFPENPEILVHARRRLVFDEFFYLQLGFLQRRQE 369
Query: 470 GLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQ 529
K + +A L +K + LP+ LT +Q ++EI+ DL Q
Sbjct: 370 ---------------EKAKQTSAVFLPQGELIEKFQKLLPFQLTGAQNRVVAEIMADLAQ 414
Query: 530 PVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEE 589
PMNRL+QGDVG GKT+VA A + I SGYQAA M PTE+LA QHY L+K + +
Sbjct: 415 STPMNRLVQGDVGAGKTIVAVFAILAAIQSGYQAALMAPTEVLAEQHYRKLVKWFNQL-- 472
Query: 590 DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQR 649
+ P + LLTGST K+ R I L TG++ +++GTH+LI + V+F L L ++DEQ R
Sbjct: 473 --YLP-VELLTGSTKAKKRREIHAQLNTGELKVLVGTHALIEDPVQFQNLGLVVIDEQHR 529
Query: 650 FGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGD 709
FGV QRGR +K G APHVL M+ATPIPRTLAL L+GD
Sbjct: 530 FGVQQRGRLLAK----------------GD-------APHVLTMTATPIPRTLALTLHGD 566
Query: 710 MSLTQITDLPPGRIPIKTYIIEGNE--KGYE 738
+ ++QI +LPPGR PI T +I+G + K YE
Sbjct: 567 LDVSQIDELPPGRQPIDTRVIKGGDRRKAYE 597
>gi|56750479|ref|YP_171180.1| ATP-dependent DNA helicase RecG [Synechococcus elongatus PCC 6301]
gi|81299888|ref|YP_400096.1| ATP-dependent DNA helicase RecG [Synechococcus elongatus PCC 7942]
gi|56685438|dbj|BAD78660.1| ATP-dependent DNA helicase RecG [Synechococcus elongatus PCC 6301]
gi|81168769|gb|ABB57109.1| ATP-dependent DNA helicase RecG [Synechococcus elongatus PCC 7942]
Length = 817
Score = 291 bits (746), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 190/539 (35%), Positives = 276/539 (51%), Gaps = 73/539 (13%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
LD+ ++ + G+ R+ QLE T+R LLHH+PR Y D
Sbjct: 121 LDQALTYLKGVGPRVAAQLERLELRTVRDLLHHYPRNYVD----------------YARQ 164
Query: 267 ISSRGMKAGCSFSFLEVIVGCEI----ADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGT 322
++ R ++ G + + + + C + + T + VV SGQ L L +FF GT
Sbjct: 165 VNIRALEPGETATLIGAVQRCTCFTSPRNAKLTILELVVRDGSGQ-----LRLSRFFMGT 219
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDD--LSLRAKG 380
R++ + + + G + SG V+ RS + I+VL D SL+ G
Sbjct: 220 RYSGRGWQEQQRRLYPPGTMIAASGLVK--RSKYGVTLDNPEIEVLDSPDSPIASLKV-G 276
Query: 381 RPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKH 440
R PIYP G+ A LR I +AL A DP+P + ++ LL L A IH P+
Sbjct: 277 RIVPIYPLTEGVAADTLRRAIVQALPAAEQLRDPLPTVLREQHQLLVLNQAIAAIHFPET 336
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ AR+RL+FDEF YLQLG L + AA + L
Sbjct: 337 PELLQQARRRLVFDEFLYLQLGLLQRRARQRAA---------------AAAAVLAPTGEL 381
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
+ + LP+ LT +Q +++I+ DL+QP PMNRL+QGDVG GKTVVA ++ + I +G
Sbjct: 382 IDRFYQLLPFQLTGAQQRVVNDILTDLQQPWPMNRLVQGDVGSGKTVVAIVSLLAAIQAG 441
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQ A M PTE+LA QHY L+ + H P + LLTGST + R I++ L TG++
Sbjct: 442 YQGALMAPTEVLAEQHYRKLVDWCTQL----HLP-VELLTGSTRAAKRREIQRSLATGEL 496
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
L++GTH+LI + V+F L L ++DEQ RFGV QR + K VN
Sbjct: 497 PLLVGTHALIQDPVDFQNLGLVVIDEQHRFGVAQRAKLQQK-----------GVN----- 540
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYEN 739
PHVL M+ATPIPRTLAL L+GD+ ++QI +LPPGR PI+T + +++ + +
Sbjct: 541 -------PHVLTMTATPIPRTLALTLHGDLEVSQIDELPPGRQPIQTTALGPSDRHHAH 592
>gi|425447457|ref|ZP_18827445.1| ATP-dependent DNA helicase recG [Microcystis aeruginosa PCC 9443]
gi|389731985|emb|CCI04022.1| ATP-dependent DNA helicase recG [Microcystis aeruginosa PCC 9443]
Length = 822
Score = 291 bits (746), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 204/626 (32%), Positives = 310/626 (49%), Gaps = 80/626 (12%)
Query: 121 FPCITLGSTPPVGLYDETKAGGSEMKSLLADQSCEAVVSNPMDAELRV--DRFGLSEAWP 178
F C++ G PPVG+ + E+ A S NP + V R L +
Sbjct: 36 FFCLSFGDNPPVGIATSERNRWRELAQKFAQYSQ----FNPRQRQQLVAETRNFLQQLRQ 91
Query: 179 SLYPA-LPNESSTSSEVGSLPSEASI----EPLLDKCISCVPGLSKRLYHQLENCGFYTL 233
+L P E + + + + P A + L++ + + + +R LE Y +
Sbjct: 92 TLEATPTPKEPAAAKIINTTPITAKANSPRQVTLEQPLKYLAEVGERKASLLERLNLYKV 151
Query: 234 RKLLHHFPRTYADL--QNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIAD 291
LL+++PR + D Q +L +G+ +G + + C S +
Sbjct: 152 EDLLYYYPRDHVDYSRQVNIANLTEGETVTLVGNV-----KRCNCFNS---------PKN 197
Query: 292 TETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRA 351
T+ + ++ +GQ K L +F+ GTR+T+ + + + + VG V VSG V+A
Sbjct: 198 TKLAIFELLLQDRTGQIK-----LNRFYAGTRYTNRAWQEGQKKLYPVGSVVAVSGLVKA 252
Query: 352 MRSNNHYEMREYNIDVLKDEDDLSLRAK--GRPYPIYPSKGGLNASLLRDTIARALQALP 409
+ E E+ L D S+ + GR P+YP G+ A L+R + A A+
Sbjct: 253 GKYGLTLENPEFE---LLDSSGASIESLKIGRILPVYPLTDGVPADLIRKAVVAAFGAVE 309
Query: 410 ANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLE 469
A DP+P + +++GL+ L A IH P + + AR+RL+FDEFF+LQLG L + +
Sbjct: 310 AIKDPLPFGLRKQYGLIDLKTAITNIHFPNNSEILSQARRRLVFDEFFFLQLGFLRRRQQ 369
Query: 470 GLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQ 529
TQ +A L + + +P+ LT++Q I EI+ DL
Sbjct: 370 YRQTQ---------------KSAVFSAKGQLIDQFNQIIPFQLTNAQKRVIEEILEDLDS 414
Query: 530 PVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEE 589
PMNRL+QGDVG GKT+V A + + SGYQAA M PTE+LA QHY L+ + +
Sbjct: 415 STPMNRLVQGDVGSGKTIVGVYAILAALQSGYQAALMAPTEVLAEQHYRKLVSWFNLL-- 472
Query: 590 DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQR 649
H P + LLTGST + R I L+TG++ L++GTH+LI + V F L L ++DEQ R
Sbjct: 473 --HLP-VELLTGSTKTAKRREIHAQLETGELPLLVGTHALIQDAVNFRKLGLVVIDEQHR 529
Query: 650 FGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGD 709
FGV QR R SK +PHVL M+ATPIPRTLAL L+GD
Sbjct: 530 FGVQQRARLLSK-----------------------GESPHVLTMTATPIPRTLALTLHGD 566
Query: 710 MSLTQITDLPPGRIPIKTYIIEGNEK 735
+ ++QI +LPPGR PI+T ++ GN++
Sbjct: 567 LDVSQIDELPPGRQPIQTTVLNGNQR 592
>gi|427418858|ref|ZP_18909041.1| ATP-dependent DNA helicase RecG [Leptolyngbya sp. PCC 7375]
gi|425761571|gb|EKV02424.1| ATP-dependent DNA helicase RecG [Leptolyngbya sp. PCC 7375]
Length = 828
Score = 291 bits (745), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 186/555 (33%), Positives = 289/555 (52%), Gaps = 69/555 (12%)
Query: 185 PNESSTSSEVGSLPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTY 244
PN S ++ SLP S PL D+ I+ + G+ + +L G YT+R +L+++PR +
Sbjct: 113 PNTKSLITQTPSLPR--SGHPL-DQPITYLKGIGPKNSERLAKLGLYTVRDVLYYYPRDH 169
Query: 245 ADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNID 304
D + R +K G + + + + C ++ + + +
Sbjct: 170 LDYARQ----------------VKIRDLKVGDTVTIVGTVRRCNCFNSPRNTKLTIFEL- 212
Query: 305 SGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYN 364
S L L +FF G RF + + + + + VG + SG V+ + + + +
Sbjct: 213 SLYDGTGTLKLNRFFAGARFRNRAWQERQKRLYPVGATLAASGLVK--KGKYGITLDDPD 270
Query: 365 IDVLKD-EDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEF 423
++VL D ++ + GR P+YP G+ A L+R + AL A +P P + ++
Sbjct: 271 LEVLGDTQEAIDSDTVGRVVPVYPLTEGVPAPLVRKAVVAALPAAIEIREPFPTALREQH 330
Query: 424 GLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDK 483
GL+ L A IH P + +AR+RL+FDEFFYLQLG LL +
Sbjct: 331 GLIQLTVAIAHIHFPPDSEALAIARRRLVFDEFFYLQLG-----------------LLSR 373
Query: 484 YRKPRLNAA-YMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVG 542
++ + + +M L + LP+SLT +Q + EI+ DL+Q PMNRL+QGDVG
Sbjct: 374 RKQQQAHTQIHMAPTGELIDQFYEVLPFSLTGAQARVVQEILVDLQQSTPMNRLVQGDVG 433
Query: 543 CGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGS 602
GKTVVA +A + I +GYQAA M PTE+LA QHY L++ + + H P + LLTGS
Sbjct: 434 SGKTVVAVVAILATIQAGYQAALMAPTEVLAEQHYRKLVEWFNLL----HLP-VELLTGS 488
Query: 603 TPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKL 662
T + R I L+TG++ +++GTH+LI + V+FS L L +DEQ RFGV QR + K
Sbjct: 489 TKTAKRREIHSQLETGELPILVGTHALIEDPVKFSRLGLVTIDEQHRFGVAQRAKLQQK- 547
Query: 663 YYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGR 722
D+ PHVL ++ATPIPRTLAL L+GD+ ++QI +LPPGR
Sbjct: 548 ------------------GDN----PHVLTLTATPIPRTLALTLHGDLDVSQIDELPPGR 585
Query: 723 IPIKTYIIEGNEKGY 737
PI+T ++ G ++ +
Sbjct: 586 KPIQTTLLAGRDRNH 600
>gi|422301387|ref|ZP_16388755.1| ATP-dependent DNA helicase recG [Microcystis aeruginosa PCC 9806]
gi|389791156|emb|CCI13022.1| ATP-dependent DNA helicase recG [Microcystis aeruginosa PCC 9806]
Length = 822
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 205/626 (32%), Positives = 312/626 (49%), Gaps = 80/626 (12%)
Query: 121 FPCITLGSTPPVGLYDETKAGGSEMKSLLADQSCEAVVSNPMDAELRVD--RFGLSEAWP 178
F C++ G +PPVG+ + E+ A S NP + V R L +
Sbjct: 36 FFCLSFGDSPPVGIATSERNRWRELAQKFAQYSQ----FNPRQRQQLVTETRNFLQQLRQ 91
Query: 179 SLYPA-LPNESSTSSEVGSLPSEA-SIEP---LLDKCISCVPGLSKRLYHQLENCGFYTL 233
+L P E + + + + P A +I P L++ + + + +R LE + +
Sbjct: 92 TLEATPTPKEPAVAKIINTTPITAKAISPRQVTLEQPLKYLAEVGERKASLLERLNLHKV 151
Query: 234 RKLLHHFPRTYADL--QNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIAD 291
LL+++PR + D Q +L +G+ +G + + C S +
Sbjct: 152 EDLLYYYPRDHVDYSRQVNIANLTEGETVTLVGNV-----KRCNCFNS---------PKN 197
Query: 292 TETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRA 351
T+ + ++ +GQ K L +F+ GTR+T+ + + + + VG V VSG V+A
Sbjct: 198 TKLAIFELLLQDRTGQIK-----LNRFYAGTRYTNRAWQEGQKKLYPVGSVVAVSGLVKA 252
Query: 352 MRSNNHYEMREYNIDVLKDEDDLSLRAK--GRPYPIYPSKGGLNASLLRDTIARALQALP 409
+ E E+ L D S+ + GR P+YP G+ A L+R + A A+
Sbjct: 253 GKYGLTLENPEFE---LLDSSGASIESLKIGRILPVYPLTDGVPADLIRKAVVAAFGAVE 309
Query: 410 ANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLE 469
A DP+P + +++GL+ L A IH P + + AR+RL+FDEFF+LQLG L + +
Sbjct: 310 AIKDPLPFGLRKQYGLIDLKTAITNIHFPNNSESLSQARRRLVFDEFFFLQLGFLRRRQQ 369
Query: 470 GLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQ 529
TQ +A L + + +P+ LT++Q I EI+ DL
Sbjct: 370 YRQTQ---------------KSAVFSARGQLIDQFNQIIPFQLTNAQKRVIEEILEDLDS 414
Query: 530 PVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEE 589
PMNRL+QGDVG GKT+V A + + SGYQAA M PTE+LA QHY L+ + +
Sbjct: 415 STPMNRLVQGDVGSGKTIVGVYAILAALQSGYQAALMAPTEVLAEQHYRKLVSWFNLL-- 472
Query: 590 DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQR 649
H P + LLTGST + R I L+TG++ L++GTH+LI + V F L L ++DEQ R
Sbjct: 473 --HLP-VELLTGSTKTAKRREIHAQLETGELPLLVGTHALIQDAVNFRKLGLVVIDEQHR 529
Query: 650 FGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGD 709
FGV QR R SK +PHVL M+ATPIPRTLAL L+GD
Sbjct: 530 FGVQQRARLLSK-----------------------GESPHVLTMTATPIPRTLALTLHGD 566
Query: 710 MSLTQITDLPPGRIPIKTYIIEGNEK 735
+ ++QI +LPPGR PI+T + GN++
Sbjct: 567 LDVSQIDELPPGRQPIQTTALNGNQR 592
>gi|425465133|ref|ZP_18844443.1| ATP-dependent DNA helicase recG [Microcystis aeruginosa PCC 9809]
gi|389832694|emb|CCI23498.1| ATP-dependent DNA helicase recG [Microcystis aeruginosa PCC 9809]
Length = 822
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 206/629 (32%), Positives = 315/629 (50%), Gaps = 86/629 (13%)
Query: 121 FPCITLGSTPPVGLYDETKAGGSEMKSLLADQSC------EAVVSNPMDAELRVDRFGLS 174
F C++ G PPVG+ + E+ A S + +V+ + L+ R L
Sbjct: 36 FFCLSFGDNPPVGISTSERNRWRELAQKFAQYSQFNSRQRQQLVTETRNF-LQQLRQTL- 93
Query: 175 EAWPSLYPALPNESSTSSEVGSLPSEA-SIEP---LLDKCISCVPGLSKRLYHQLENCGF 230
EA P+ P E + + + + P A +I P L++ + + + +R LE
Sbjct: 94 EATPT-----PKEPAAAKIINTTPITAKAISPRQVTLEQPLKYLAEVGERKAGLLEKLNL 148
Query: 231 YTLRKLLHHFPRTYADL--QNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCE 288
+ + LL+++PR + D Q +L +G+ +G + + C S
Sbjct: 149 HKVEDLLYYYPRDHIDYSRQVNIANLTEGETVTLVGNV-----KRCNCFTS--------- 194
Query: 289 IADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGK 348
+T+ + ++ SGQ K L +F+ GTR+T+ + + + + VG V VSG
Sbjct: 195 PKNTKLAIFELLLQDRSGQIK-----LNRFYAGTRYTNRAWQEGQKKLYLVGSVVAVSGL 249
Query: 349 VRAMRSNNHYEMREYNIDVLKDEDDLSLRAK--GRPYPIYPSKGGLNASLLRDTIARALQ 406
V+A + E E+ L D S+ + GR P+YP G+ A L+R T+ A
Sbjct: 250 VKAGKYGLTLENPEFE---LLDSSGASIESLKIGRILPVYPLTDGVPADLIRKTVIAAFG 306
Query: 407 ALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQ 466
A+ A DP+P + +++GL+ L A IH P + + AR+RL+FDEFF+LQLG L +
Sbjct: 307 AVEAIKDPLPFGLRKQYGLIDLKTAITNIHFPNNAEILSQARRRLVFDEFFFLQLGFLRR 366
Query: 467 MLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWD 526
+ + +A L + + +P+ LT++Q I EI+ D
Sbjct: 367 R---------------QQYRQSQKSAVFSAKGQLIDRFNQIIPFQLTNAQKRVIEEILED 411
Query: 527 LKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDN 586
L PMNRL+QGDVG GKT+V A + + SGYQAA M PTE+LA QHY L+ +
Sbjct: 412 LDSSTPMNRLVQGDVGSGKTIVGVYAILAALQSGYQAALMAPTEVLAEQHYRKLVSWFNL 471
Query: 587 MEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDE 646
+ H P + LLTGST + R I L+TG++ L++GTH+LI + V F L L ++DE
Sbjct: 472 L----HLP-VELLTGSTKTAKRREIHAQLETGELPLLVGTHALIQDAVNFRKLGLVVIDE 526
Query: 647 QQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALAL 706
Q RFGV QR R SK +PHVL M+ATPIPRTLAL L
Sbjct: 527 QHRFGVQQRARLLSK-----------------------GESPHVLTMTATPIPRTLALTL 563
Query: 707 YGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
+GD+ ++QI +LPPGR PI+T + GN++
Sbjct: 564 HGDLDVSQIDELPPGRQPIQTTALNGNQR 592
>gi|434393632|ref|YP_007128579.1| ATP-dependent DNA helicase RecG [Gloeocapsa sp. PCC 7428]
gi|428265473|gb|AFZ31419.1| ATP-dependent DNA helicase RecG [Gloeocapsa sp. PCC 7428]
Length = 833
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 194/557 (34%), Positives = 293/557 (52%), Gaps = 77/557 (13%)
Query: 190 TSSEVGSLPSEAS--IEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADL 247
T+ SLP EA+ I P L++ + +P + R L G YT+R +L ++PR + D
Sbjct: 117 TTPLTQSLPIEAATRIAPNLEQPLKSLPEIGARRSGYLARLGLYTVRDILFYYPRDHIDY 176
Query: 248 QNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADT----ETTSGDEVVNI 303
Q+++ + ++AG + + L + C ++ + T + V+
Sbjct: 177 AR-QVNIKE---------------LQAGETVTLLGAVKRCTCFNSPRNPKLTILELVLKD 220
Query: 304 DSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREY 363
++GQ + + +FF G R++ + + + ++ VG V SG V+ S + +
Sbjct: 221 NTGQ-----IRISRFFAGARYSHRGWQEQQKRRYPVGAVVAASGLVK--ESKYGLTLEDP 273
Query: 364 NIDVLKDE-DDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQE 422
I+VL D + GR P+Y G+ A ++R + AL A DP+P + +
Sbjct: 274 EIEVLAHPGDTIDSLTIGRVVPVYALTEGVGADMVRKAVTAALPACVHLKDPLPFRLRDK 333
Query: 423 FGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLD 482
+GL+ L A IH P ++AR+RL+FDEFFYLQLG LL
Sbjct: 334 YGLMELKAAITNIHFPADSTSLEVARRRLVFDEFFYLQLG-----------------LLQ 376
Query: 483 KYRKPRL--NAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGD 540
+ K R N A + L K + LP+ LT++Q +++I+ DL++PVPMNRL+QGD
Sbjct: 377 RQHKARQIQNGAVLARTGQLIKTFYQLLPFQLTNAQSRVVNDILDDLQKPVPMNRLVQGD 436
Query: 541 VGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLT 600
VG GKTVVA +A + I SGYQAA M PTE+LA QHY L+ + + H P + LLT
Sbjct: 437 VGSGKTVVAVVAILAAIQSGYQAALMAPTEVLAEQHYRKLVGWFNLL----HLP-VELLT 491
Query: 601 GSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNS 660
GST + R I L+TG++ L++GTH+LI EKV F L L ++DEQ RFGV QR +
Sbjct: 492 GSTKTAKRRQIHAQLETGELPLLVGTHALIQEKVNFQRLGLVVIDEQHRFGVGQRAQLQQ 551
Query: 661 KLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPP 720
K +PHVL M+ATPIPRTLAL L+GD+ ++QI +LPP
Sbjct: 552 K-----------------------GESPHVLTMTATPIPRTLALTLHGDLDVSQIDELPP 588
Query: 721 GRIPIKTYIIEGNEKGY 737
GR I+T ++ G E+ +
Sbjct: 589 GRQQIQTTVLSGKERTH 605
>gi|172035243|ref|YP_001801744.1| ATP-dependent DNA helicase RecG [Cyanothece sp. ATCC 51142]
gi|354555748|ref|ZP_08975048.1| ATP-dependent DNA helicase RecG [Cyanothece sp. ATCC 51472]
gi|171696697|gb|ACB49678.1| ATP-dependent DNA helicase [Cyanothece sp. ATCC 51142]
gi|353552398|gb|EHC21794.1| ATP-dependent DNA helicase RecG [Cyanothece sp. ATCC 51472]
Length = 819
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 202/632 (31%), Positives = 315/632 (49%), Gaps = 95/632 (15%)
Query: 121 FPCITLGSTPPVGLYDETKAGGSEMKSLLADQSCEAVVS-NPMDAELRVDRFGLSEAWPS 179
F C+ G +PP G + + AD S +V + ++ R + L + +
Sbjct: 36 FLCLNFGQSPPTGTPTSDRRKWQNFAAQYADYSNLSVAQRKTLISQTRQFLYELRKTLET 95
Query: 180 LY----PALPNESSTSSEVGSLPSEASIEPL-LDKCISCVPGLSKRLYHQLENCGFYTLR 234
P LP ++ + + +AS+ P+ LD+ ++ + + + L+ G +T++
Sbjct: 96 PRELPPPKLPKTTAITDK------KASLRPVTLDQSLNNLAEVGYKRGELLKRLGLHTVK 149
Query: 235 KLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCS---------FSFLEVIV 285
+L ++PR + D Q+ + + + GE ++ G C+ S E+I+
Sbjct: 150 DILFYYPRDHIDYAR-QVAISN----LVAGETVTIVGTVKRCNCFTSPKNKKLSIFELIL 204
Query: 286 GCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCV 345
++ L +FF GTRFTS + + + + +G V
Sbjct: 205 RDHTG---------------------HIKLNRFFAGTRFTSRGWQERQKRIYPLGSIVAA 243
Query: 346 SGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAK--GRPYPIYPSKGGLNASLLRDTIAR 403
SG V+ R + E I+VL D S+ + GR P+YP G+ A L+R I
Sbjct: 244 SGLVKQNRYGITLDNPE--IEVL-DSVGSSIESLKIGRVLPVYPLTEGVGADLIRKAIIA 300
Query: 404 ALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGR 463
+L+A+ DP+P+ + +++GL+ L DA IH P+ + AR+RL+FDEFFYLQLG
Sbjct: 301 SLEAIKQIRDPLPRVLREQYGLMGLKDAIGNIHFPETPELLAHARRRLVFDEFFYLQLGF 360
Query: 464 LYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEI 523
L + E +K N+A L K+ LP+ LT++Q I+EI
Sbjct: 361 LQRRQE---------------QKQVHNSAVFTPQGKLIKQFDDILPFKLTNAQQRVINEI 405
Query: 524 IWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKL 583
+ DL PMNRL+QGDVG GKT+VA A + + SGYQAA M PTE+LA QHY +
Sbjct: 406 LEDLNSVTPMNRLVQGDVGAGKTIVAVFAILAALQSGYQAALMAPTEVLAEQHYRKFIPW 465
Query: 584 LDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAI 643
+ + + P + LLTGST + I + LQTG++ L++GTH+LI + V F L L +
Sbjct: 466 FNQL----YLP-VELLTGSTKKAKREEIHRQLQTGELPLLVGTHALIQDPVNFQKLGLVV 520
Query: 644 VDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLA 703
+DEQ RFGV QR + +K +PHVL M+ATPIPRTLA
Sbjct: 521 IDEQHRFGVQQRAKLLAK-----------------------GKSPHVLTMTATPIPRTLA 557
Query: 704 LALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
L L+GD+ ++QI +LPPGR I+T ++ G E+
Sbjct: 558 LTLHGDLDVSQIDELPPGRQAIQTTVLTGKER 589
>gi|390441056|ref|ZP_10229240.1| ATP-dependent DNA helicase recG [Microcystis sp. T1-4]
gi|389835621|emb|CCI33366.1| ATP-dependent DNA helicase recG [Microcystis sp. T1-4]
Length = 822
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 203/626 (32%), Positives = 310/626 (49%), Gaps = 80/626 (12%)
Query: 121 FPCITLGSTPPVGLYDETKAGGSEMKSLLADQSCEAVVSNPMDAELRV--DRFGLSEAWP 178
F C++ G PPVG+ + E+ A S NP + V R L +
Sbjct: 36 FLCLSFGDNPPVGIATSERNRWRELAQKFAQYSQ----FNPKQRQQLVVETRNFLQQLRQ 91
Query: 179 SLYPA-LPNESSTSSEVGSLPSEASI----EPLLDKCISCVPGLSKRLYHQLENCGFYTL 233
+L P E + + + + P A + L++ + + + +R LE + +
Sbjct: 92 TLEATPTPKEPAAAKIINTTPITAKANSPRQVTLEQPLKYLAEVGERKASLLERLNLHKV 151
Query: 234 RKLLHHFPRTYADL--QNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIAD 291
LL+++PR + D Q +L +G+ +G + ++ C S +
Sbjct: 152 EDLLYYYPRDHVDYSRQVNIANLTEGETVTLVGNV-----KRSNCFTS---------PKN 197
Query: 292 TETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRA 351
T+ + ++ +GQ K L +F+ GTR+T+ + + + + VG V VSG V+A
Sbjct: 198 TKLAIFELLLQDRTGQIK-----LNRFYAGTRYTNRAWQEGQKKLYPVGSVVAVSGLVKA 252
Query: 352 MRSNNHYEMREYNIDVLKDEDDLSLRAK--GRPYPIYPSKGGLNASLLRDTIARALQALP 409
+ E E+ L D S+ + GR P+YP G+ A L+R + A A+
Sbjct: 253 GKYGLTLENPEFE---LLDSSGASIESLKIGRILPVYPLTDGVPADLIRKAVVAAFGAVE 309
Query: 410 ANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLE 469
A DP+P + +++GL+ L A IH P + + AR+RL+FDEFF+LQLG L + +
Sbjct: 310 AIKDPLPFGLRKQYGLIDLKTAITNIHFPNNSESLSQARRRLVFDEFFFLQLGFLRRRQQ 369
Query: 470 GLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQ 529
TQ +A L + + +P+ LT++Q I EI+ DL
Sbjct: 370 YRQTQ---------------KSAVFSARGQLIDQFNQIIPFQLTNAQKRVIEEILEDLDS 414
Query: 530 PVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEE 589
PMNRL+QGDVG GKT+V A + + SGYQAA M PTE+LA QHY L+ + +
Sbjct: 415 STPMNRLVQGDVGSGKTIVGVYAILAALQSGYQAALMAPTEVLAEQHYRKLVSWFNLL-- 472
Query: 590 DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQR 649
H P + LLTGST + R I L+TG++ L++GTH+LI + V F L L ++DEQ R
Sbjct: 473 --HLP-VELLTGSTKTAKRREIHAQLETGELPLLVGTHALIQDAVNFRKLGLVVIDEQHR 529
Query: 650 FGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGD 709
FGV QR R SK +PHVL M+ATPIPRTLAL L+GD
Sbjct: 530 FGVQQRARLLSK-----------------------GESPHVLTMTATPIPRTLALTLHGD 566
Query: 710 MSLTQITDLPPGRIPIKTYIIEGNEK 735
+ ++QI +LPPGR PI+T + GN++
Sbjct: 567 LDVSQIDELPPGRQPIQTTALNGNQR 592
>gi|425441200|ref|ZP_18821483.1| ATP-dependent DNA helicase recG [Microcystis aeruginosa PCC 9717]
gi|389718168|emb|CCH97843.1| ATP-dependent DNA helicase recG [Microcystis aeruginosa PCC 9717]
Length = 822
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 203/626 (32%), Positives = 310/626 (49%), Gaps = 80/626 (12%)
Query: 121 FPCITLGSTPPVGLYDETKAGGSEMKSLLADQSCEAVVSNPMDAELRVD--RFGLSEAWP 178
F C++ G PPVG+ + E+ A S NP + V R L +
Sbjct: 36 FFCLSFGDNPPVGISTSERNRWRELAQKFAQYSQ----FNPRQRQQLVTETRNFLQQLRQ 91
Query: 179 SLYPA-LPNESSTSSEVGSLPSEA-SIEP---LLDKCISCVPGLSKRLYHQLENCGFYTL 233
+L P E + + + + P A +I P L++ + + + +R LE + +
Sbjct: 92 TLEATPTPKEPAVAKIINTTPITAKAISPRQVTLEQPLKYLAEVGERKAGLLEKLNLHKV 151
Query: 234 RKLLHHFPRTYADL--QNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIAD 291
LL+++PR + D Q +L +G+ +G + + C S +
Sbjct: 152 EDLLYYYPRDHIDYSRQVNIANLTEGETVTLVGNV-----KRCNCFTS---------PKN 197
Query: 292 TETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRA 351
T+ + ++ +GQ K L +F+ GTR+T+ + + + + VG V VSG V+A
Sbjct: 198 TKLAIFELLLQDRTGQIK-----LNRFYAGTRYTNRAWQEGQKKLYLVGSVVAVSGLVKA 252
Query: 352 MRSNNHYEMREYNIDVLKDEDDLSLRAK--GRPYPIYPSKGGLNASLLRDTIARALQALP 409
+ E E+ L D S+ + GR P+YP G+ A L+R + A A+
Sbjct: 253 GKYGLTLENPEFE---LLDSSGASIESLKIGRILPVYPLTDGVPADLIRKAVVAAFGAVE 309
Query: 410 ANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLE 469
A DP+P + +++GL+ L A IH P + + AR+RL+FDEFF+LQLG L +
Sbjct: 310 AIKDPLPFGLRKQYGLIDLKTAITNIHFPNNAEILSQARRRLVFDEFFFLQLGFLRRR-- 367
Query: 470 GLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQ 529
+ + +A L + + +P+ LT++Q I EI+ DL
Sbjct: 368 -------------QQYRQTQKSAVFSAKGQLIDRFNQIIPFQLTNAQKRVIEEILEDLDS 414
Query: 530 PVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEE 589
PMNRL+QGDVG GKT+V A + + SGYQAA M PTE+LA QHY L+ + +
Sbjct: 415 STPMNRLVQGDVGSGKTIVGVYAILAALQSGYQAALMAPTEVLAEQHYRKLVSWFNLL-- 472
Query: 590 DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQR 649
H P + LLTGST + R I L+TG++ L++GTH+LI + V F L L ++DEQ R
Sbjct: 473 --HLP-VELLTGSTKTAKRREIHAQLETGELPLLVGTHALIQDAVNFRKLGLVVIDEQHR 529
Query: 650 FGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGD 709
FGV QR R SK +PHVL M+ATPIPRTLAL L+GD
Sbjct: 530 FGVQQRARLLSK-----------------------GESPHVLTMTATPIPRTLALTLHGD 566
Query: 710 MSLTQITDLPPGRIPIKTYIIEGNEK 735
+ ++QI +LPPGR PI+T + GN++
Sbjct: 567 LDVSQIDELPPGRQPIQTSALNGNQR 592
>gi|166368534|ref|YP_001660807.1| ATP-dependent DNA helicase RecG [Microcystis aeruginosa NIES-843]
gi|166090907|dbj|BAG05615.1| DNA recombinase [Microcystis aeruginosa NIES-843]
Length = 822
Score = 289 bits (739), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 203/626 (32%), Positives = 311/626 (49%), Gaps = 80/626 (12%)
Query: 121 FPCITLGSTPPVGLYDETKAGGSEMKSLLADQSCEAVVSNPMDAELRVD--RFGLSEAWP 178
F C++ G PPVG+ + E LA + + NP + V R L +
Sbjct: 36 FFCLSFGDNPPVGISTSERNRWRE----LAQKFAQYYQFNPRQRQQLVTETRNFLQQLRQ 91
Query: 179 SLYPA-LPNESSTSSEVGSLPSEA-SIEP---LLDKCISCVPGLSKRLYHQLENCGFYTL 233
+L P E + + + + P A +I P L++ + + + +R LE + +
Sbjct: 92 TLEATPTPKEPAVAKIINTTPITAKAISPRQVTLEQPLKYLAEVGERKAGLLEKLNLHKV 151
Query: 234 RKLLHHFPRTYADL--QNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIAD 291
LL+++PR + D Q +L +G+ +G + + C S +
Sbjct: 152 EDLLYYYPRDHIDYSRQVNIANLTEGETVTLVGNV-----KRCNCFTS---------PKN 197
Query: 292 TETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRA 351
T+ + ++ +GQ K L +F+ GTR+T+ + + + + VG V VSG V+A
Sbjct: 198 TKLAIFELLLQDRTGQIK-----LNRFYAGTRYTNRAWQEGQKKLYLVGSVVAVSGLVKA 252
Query: 352 MRSNNHYEMREYNIDVLKDEDDLSLRAK--GRPYPIYPSKGGLNASLLRDTIARALQALP 409
+ E E+ L D S+ + GR P+YP G+ A L+R + A A+
Sbjct: 253 GKYGLTLENPEFE---LLDSSGASIESLKIGRILPVYPLTDGVPADLIRKAVVAAFGAVE 309
Query: 410 ANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLE 469
A DP+P + +++GL+ L A IH P + + AR+RL+FDEFF+LQLG L +
Sbjct: 310 AIKDPLPFGLRKQYGLIDLKTAITNIHFPNNAEILSQARRRLVFDEFFFLQLGFLRRR-- 367
Query: 470 GLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQ 529
+ + +A L + + +P+ LT++Q I EI+ DL
Sbjct: 368 -------------QQYRQTQKSAIFSAKGQLIDQFNQIIPFQLTNAQKRVIEEILEDLDS 414
Query: 530 PVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEE 589
PMNRL+QGDVG GKT+V A + + SGYQAA M PTE+LA QHY L+ + +
Sbjct: 415 STPMNRLVQGDVGSGKTIVGVYAILAALQSGYQAALMAPTEVLAEQHYRKLVSWFNLL-- 472
Query: 590 DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQR 649
H P + LLTGST + R I L+TG++ L++GTH+LI + V F L L ++DEQ R
Sbjct: 473 --HLP-VELLTGSTKTAKRREIHAQLETGELPLLVGTHALIQDAVNFRKLGLVVIDEQHR 529
Query: 650 FGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGD 709
FGV QR R SK +PHVL M+ATPIPRTLAL L+GD
Sbjct: 530 FGVQQRARLLSK-----------------------GESPHVLTMTATPIPRTLALTLHGD 566
Query: 710 MSLTQITDLPPGRIPIKTYIIEGNEK 735
+ ++QI +LPPGR PI+T + GN++
Sbjct: 567 LDVSQIDELPPGRQPIQTTALNGNQR 592
>gi|428780153|ref|YP_007171939.1| ATP-dependent DNA helicase RecG [Dactylococcopsis salina PCC 8305]
gi|428694432|gb|AFZ50582.1| ATP-dependent DNA helicase RecG [Dactylococcopsis salina PCC 8305]
Length = 818
Score = 288 bits (738), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 188/534 (35%), Positives = 282/534 (52%), Gaps = 71/534 (13%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
LD+ + +P + + L G T+R +L ++PR + D Q+++ D + GE
Sbjct: 121 LDQSLEDIPDIGRTRSRSLSRLGLKTVRDVLFYYPREHIDYAR-QVNISD----LEAGET 175
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIA--DTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
++ G C+ C + + + + V+ +G+ K L +FF GTRF
Sbjct: 176 VTVVGSVRSCN---------CFTSPKNPKLSIFQLVIKDRTGEVK-----LSRFFAGTRF 221
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYN--IDVLKDED-DLSLRAKGR 381
T+ + + + + G V SG V+ N Y + N I++L + ++ GR
Sbjct: 222 TNRGWQEKQKKLYPRGAIVAASGLVK----KNKYGITLDNPEIEILDSQGAEIESLNIGR 277
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
P+YP G++A ++R + + L A DP+P + +++G L L +A +H P
Sbjct: 278 VLPVYPLTEGVSADVVRKAVLKVLPAADTLKDPLPSTLRKQYGFLPLPEAIKNLHFPPDH 337
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
+ AR+RLIFDEFF+LQLG L + + TQ K LLD K L
Sbjct: 338 ETLSHARRRLIFDEFFFLQLGFLSRRQQQRETQ--KSALLDPTGK-------------LI 382
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
+ + LP+SLT++Q +S+I+ DL PMNRL+QGDVG GKTVVA A + I SGY
Sbjct: 383 DQFKQVLPFSLTNAQQRVVSDILQDLNSETPMNRLVQGDVGSGKTVVAVFAILAAIQSGY 442
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
QAA M PTE+LA QHY L+ + + H P + LLTGST + R I + L+TG++
Sbjct: 443 QAALMAPTEVLAEQHYRKLVGWFNLL----HLP-VELLTGSTKTAKRREIHQQLETGELP 497
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
L++GTH+LI + V F L L ++DEQ RFGV QR R
Sbjct: 498 LLVGTHALIQDTVNFQQLGLVVIDEQHRFGVQQRARLL---------------------- 535
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
D+ +PHVL+M+ATPIPRTLAL L+GD+ ++QI +LPPGR I+T + G E+
Sbjct: 536 -DKGHSPHVLSMTATPIPRTLALTLHGDLDVSQIDELPPGRQEIQTTALSGRER 588
>gi|440752015|ref|ZP_20931218.1| ATP-dependent DNA helicase RecG [Microcystis aeruginosa TAIHU98]
gi|440176508|gb|ELP55781.1| ATP-dependent DNA helicase RecG [Microcystis aeruginosa TAIHU98]
Length = 822
Score = 288 bits (737), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 203/626 (32%), Positives = 308/626 (49%), Gaps = 80/626 (12%)
Query: 121 FPCITLGSTPPVGLYDETKAGGSEMKSLLADQSCEAVVSNPMDAELRV--DRFGLSEAWP 178
F C++ G PPVG+ + E+ A S NP + V R L +
Sbjct: 36 FLCLSFGDNPPVGIATSERNRWRELAQKFAQYSQ----FNPRQRQQLVAETRNFLQQLRQ 91
Query: 179 SLYPA-LPNESSTSSEVGSLPSEASI----EPLLDKCISCVPGLSKRLYHQLENCGFYTL 233
+L P E + + + + P A + L++ + + + +R LE + +
Sbjct: 92 TLEATPTPKEPAAAKIINTTPITAKANSPRQVTLEQPLKYLAEVGERKASLLERLNLHKV 151
Query: 234 RKLLHHFPRTYADL--QNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIAD 291
LL+++PR + D Q +L +G+ +G + + C S +
Sbjct: 152 EDLLYYYPRDHVDYSRQVNIANLTEGETVTLVGNV-----KRCNCFNS---------PKN 197
Query: 292 TETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRA 351
T+ + ++ +GQ K L +F+ GTR+ + + + + + VG V VSG V+A
Sbjct: 198 TKLAIFELLLQDRTGQIK-----LNRFYAGTRYNNRAWQEGQKKLYPVGSVVAVSGLVKA 252
Query: 352 MRSNNHYEMREYNIDVLKDEDDLSLRAK--GRPYPIYPSKGGLNASLLRDTIARALQALP 409
+ E E+ L D S+ + GR P+YP G+ A L+R + A A+
Sbjct: 253 GKYGLTLENPEFE---LLDSSGASIESLKIGRILPVYPLTDGVPADLIRKAVVAAFGAVE 309
Query: 410 ANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLE 469
A DP+P + +++GL+ L A IH P + D AR+RL+FDEFF+LQLG L + +
Sbjct: 310 AIKDPLPFGLRKQYGLIDLKTAITNIHFPNNSDILSQARRRLVFDEFFFLQLGFLRRRQQ 369
Query: 470 GLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQ 529
TQ +A L + + +P+ LT++Q I EI+ DL
Sbjct: 370 YRQTQ---------------KSAIFSARGQLIDQFNQIIPFQLTNAQKRVIEEILEDLDS 414
Query: 530 PVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEE 589
PMNRL+QGDVG GKT+V A + + SGYQAA M PTE+LA QHY L+ + +
Sbjct: 415 STPMNRLVQGDVGSGKTIVGVYAILAALQSGYQAALMAPTEVLAEQHYRKLVSWFNLL-- 472
Query: 590 DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQR 649
H P + LLTGST + R I L+TG++ L++GTH+LI + V F L L ++DEQ R
Sbjct: 473 --HLP-VELLTGSTKTAKRREIHAQLETGELPLLVGTHALIQDAVNFRKLGLVVIDEQHR 529
Query: 650 FGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGD 709
FGV QR R SK +PHVL M+ATPIPRTLAL L+GD
Sbjct: 530 FGVQQRARLLSK-----------------------GESPHVLTMTATPIPRTLALTLHGD 566
Query: 710 MSLTQITDLPPGRIPIKTYIIEGNEK 735
+ ++QI +LPPGR PI+T + GN++
Sbjct: 567 LDVSQIDELPPGRQPIQTTALNGNQR 592
>gi|67924795|ref|ZP_00518195.1| ATP-dependent DNA helicase RecG [Crocosphaera watsonii WH 8501]
gi|67853363|gb|EAM48722.1| ATP-dependent DNA helicase RecG [Crocosphaera watsonii WH 8501]
Length = 821
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 208/627 (33%), Positives = 317/627 (50%), Gaps = 85/627 (13%)
Query: 121 FPCITLGSTPPVGL-------YDETKAGGSEMKSL-LADQSCEAVVSNPMDAELRVDRFG 172
F C + G +PP G + + + SL +A + + ELR
Sbjct: 38 FLCFSFGQSPPSGTPISDRRRWQDLATQYANYPSLTIAQRKTLITQTRQFLHELRTTLET 97
Query: 173 LSEAWPSLYPALPNESSTSSEVGSLPSEASIEPL-LDKCISCVPGLSKRLYHQLENCGFY 231
+E PS P LP ++ + + SL P+ LD+ +S + + L+ G Y
Sbjct: 98 PTEP-PS--PKLPKTTAITDKTSSL------RPVTLDQSLSTLAEVGSSRGDLLKRLGLY 148
Query: 232 TLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIA- 290
T++ LL ++PR + D Q+ + + GE ++ G C+ C +
Sbjct: 149 TVKDLLFYYPRDHIDYAR-QVSI----CHLVAGETVTIVGTVKRCN---------CFTSP 194
Query: 291 -DTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKV 349
+ + + + ++ ++GQ K L +FF G RFT+ + + + + VG V SG V
Sbjct: 195 KNKKLSIFELILKDNTGQIK-----LNRFFAGARFTNRGWQERQKRFYPVGAVVAASGLV 249
Query: 350 RAMRSNNHYEMREYNI-DVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQAL 408
+ R E E + D L D SL+ GR +P+YP G+ A L+R I +L+A+
Sbjct: 250 KQNRYGVTLENPEIEVLDSLGSSID-SLKI-GRVFPVYPLTEGVGADLIRKAIIASLEAI 307
Query: 409 PANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQML 468
DP+P+ + +E+GL+ L +A IH P+ + AR+RL+FDEFFYLQLG L +
Sbjct: 308 KQIRDPLPRILREEYGLIGLKEAINNIHFPESPELLAHARRRLVFDEFFYLQLGFLQRRQ 367
Query: 469 EGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLK 528
E +K N+A L ++ + LP+SLT++Q I+EI+ DL
Sbjct: 368 E---------------QKQIHNSAVFTPQGKLIEQFNQILPFSLTNAQQQVINEILEDLN 412
Query: 529 QPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNME 588
PMNRL+QGDVG GKT+VA A + + S YQAA M PTE+LA QHY L+ + +
Sbjct: 413 SVTPMNRLVQGDVGAGKTIVAVFAILAALQSSYQAALMAPTEVLAEQHYRKLVPWFNQL- 471
Query: 589 EDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQ 648
+ P + LLTGST + I + L TG++ L++GTH+LI + V F L L ++DEQ
Sbjct: 472 ---YLP-VELLTGSTKKAKREEIHRQLITGELPLLVGTHALIQDPVNFQKLGLVVIDEQH 527
Query: 649 RFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYG 708
RFGV QR + +K +PHVL M+ATPIPRTLAL L+G
Sbjct: 528 RFGVQQRAKLLAK-----------------------GKSPHVLTMTATPIPRTLALTLHG 564
Query: 709 DMSLTQITDLPPGRIPIKTYIIEGNEK 735
D+ ++QI +LPPGR I+T + G E+
Sbjct: 565 DLDVSQIDELPPGRQAIQTTALTGKER 591
>gi|425452376|ref|ZP_18832193.1| ATP-dependent DNA helicase recG [Microcystis aeruginosa PCC 7941]
gi|389765848|emb|CCI08362.1| ATP-dependent DNA helicase recG [Microcystis aeruginosa PCC 7941]
Length = 822
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 203/626 (32%), Positives = 308/626 (49%), Gaps = 80/626 (12%)
Query: 121 FPCITLGSTPPVGLYDETKAGGSEMKSLLADQSCEAVVSNPMDAELRV--DRFGLSEAWP 178
F C++ G PPVG+ + E+ A S NP + V R L +
Sbjct: 36 FLCLSFGDNPPVGIATSERNRWRELAQKFAQYSQ----FNPRQRQQLVAETRNFLQQLRQ 91
Query: 179 SLYPA-LPNESSTSSEVGSLPSEASI----EPLLDKCISCVPGLSKRLYHQLENCGFYTL 233
+L P E + + + + P A + L++ + + + +R LE + +
Sbjct: 92 TLEATPTPKEPAAAKIINTTPITAKANSPRQVTLEQPLKYLAEVGERKASLLERLNLHKV 151
Query: 234 RKLLHHFPRTYADL--QNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIAD 291
LL+++PR + D Q +L +G+ +G + + C S +
Sbjct: 152 EDLLYYYPRDHVDYSRQVNIANLTEGETVTLVGNV-----KRCNCFNS---------PKN 197
Query: 292 TETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRA 351
T+ + ++ +GQ K L +F+ GTR+ + + + + + VG V VSG V+A
Sbjct: 198 TKLAIFELLLQDRTGQIK-----LNRFYAGTRYNNRAWQEGQKKLYPVGSVVAVSGLVKA 252
Query: 352 MRSNNHYEMREYNIDVLKDEDDLSLRAK--GRPYPIYPSKGGLNASLLRDTIARALQALP 409
+ E E+ L D S+ + GR P+YP G+ A L+R + A A+
Sbjct: 253 GKYGLTLENPEFE---LLDSSGASIESLKIGRILPVYPLTDGVPADLIRKAVVAAFGAVE 309
Query: 410 ANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLE 469
A DP+P + +++GL+ L A IH P + D AR+RL+FDEFF+LQLG L + +
Sbjct: 310 AIKDPLPFGLRKQYGLIDLKTAITNIHFPNNSDILSQARRRLVFDEFFFLQLGFLRRRQQ 369
Query: 470 GLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQ 529
TQ +A L + + +P+ LT++Q I EI+ DL
Sbjct: 370 YRQTQ---------------KSAIFSAKGQLIDQFNQIIPFQLTNAQKRVIEEILEDLDS 414
Query: 530 PVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEE 589
PMNRL+QGDVG GKT+V A + + SGYQAA M PTE+LA QHY L+ + +
Sbjct: 415 STPMNRLVQGDVGSGKTIVGVYAILAALQSGYQAALMAPTEVLAEQHYRKLVSWFNLL-- 472
Query: 590 DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQR 649
H P + LLTGST + R I L+TG++ L++GTH+LI + V F L L ++DEQ R
Sbjct: 473 --HLP-VELLTGSTKTAKRREIHAQLETGELPLLVGTHALIQDAVNFRKLGLVVIDEQHR 529
Query: 650 FGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGD 709
FGV QR R SK +PHVL M+ATPIPRTLAL L+GD
Sbjct: 530 FGVQQRARLLSK-----------------------GESPHVLTMTATPIPRTLALTLHGD 566
Query: 710 MSLTQITDLPPGRIPIKTYIIEGNEK 735
+ ++QI +LPPGR PI+T + GN++
Sbjct: 567 LDVSQIDELPPGRQPIQTTALNGNQR 592
>gi|416405929|ref|ZP_11687999.1| ATP-dependent DNA helicase RecG [Crocosphaera watsonii WH 0003]
gi|357261188|gb|EHJ10487.1| ATP-dependent DNA helicase RecG [Crocosphaera watsonii WH 0003]
Length = 819
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 208/627 (33%), Positives = 317/627 (50%), Gaps = 85/627 (13%)
Query: 121 FPCITLGSTPPVGL-------YDETKAGGSEMKSL-LADQSCEAVVSNPMDAELRVDRFG 172
F C + G +PP G + + + SL +A + + ELR
Sbjct: 36 FLCFSFGQSPPSGTPISDRRRWQDLATQYANYPSLTIAQRKTLITQTRQFLHELRTTLET 95
Query: 173 LSEAWPSLYPALPNESSTSSEVGSLPSEASIEPL-LDKCISCVPGLSKRLYHQLENCGFY 231
+E PS P LP ++ + + SL P+ LD+ +S + + L+ G Y
Sbjct: 96 PTEP-PS--PKLPKTTAITDKTSSL------RPVTLDQSLSTLAEVGSSRGDLLKRLGLY 146
Query: 232 TLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIA- 290
T++ LL ++PR + D Q+ + + GE ++ G C+ C +
Sbjct: 147 TVKDLLFYYPRDHIDYAR-QVSI----CHLVAGETVTIVGTVKRCN---------CFTSP 192
Query: 291 -DTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKV 349
+ + + + ++ ++GQ K L +FF G RFT+ + + + + VG V SG V
Sbjct: 193 KNKKLSIFELILKDNTGQIK-----LNRFFAGARFTNRGWQERQKRFYPVGAVVAASGLV 247
Query: 350 RAMRSNNHYEMREYNI-DVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQAL 408
+ R E E + D L D SL+ GR +P+YP G+ A L+R I +L+A+
Sbjct: 248 KQNRYGVTLENPEIEVLDSLGSSID-SLKI-GRVFPVYPLTEGVGADLIRKAIIASLEAI 305
Query: 409 PANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQML 468
DP+P+ + +E+GL+ L +A IH P+ + AR+RL+FDEFFYLQLG L +
Sbjct: 306 KQIRDPLPRILREEYGLIGLKEAINNIHFPESPELLAHARRRLVFDEFFYLQLGFLQRRQ 365
Query: 469 EGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLK 528
E +K N+A L ++ + LP+SLT++Q I+EI+ DL
Sbjct: 366 E---------------QKQIHNSAVFTPQGKLIEQFNQILPFSLTNAQQRVINEILEDLN 410
Query: 529 QPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNME 588
PMNRL+QGDVG GKT+VA A + + S YQAA M PTE+LA QHY L+ + +
Sbjct: 411 SVTPMNRLVQGDVGAGKTIVAVFAILAALQSSYQAALMAPTEVLAEQHYRKLVPWFNQL- 469
Query: 589 EDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQ 648
+ P + LLTGST + I + L TG++ L++GTH+LI + V F L L ++DEQ
Sbjct: 470 ---YLP-VELLTGSTKKAKREEIHRQLITGELPLLVGTHALIQDPVNFQKLGLVVIDEQH 525
Query: 649 RFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYG 708
RFGV QR + +K +PHVL M+ATPIPRTLAL L+G
Sbjct: 526 RFGVQQRAKLLAK-----------------------GKSPHVLTMTATPIPRTLALTLHG 562
Query: 709 DMSLTQITDLPPGRIPIKTYIIEGNEK 735
D+ ++QI +LPPGR I+T + G E+
Sbjct: 563 DLDVSQIDELPPGRQAIQTTALTGKER 589
>gi|37520847|ref|NP_924224.1| ATP-dependent DNA helicase RecG [Gloeobacter violaceus PCC 7421]
gi|35211842|dbj|BAC89219.1| DNA recombinase [Gloeobacter violaceus PCC 7421]
Length = 811
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 201/619 (32%), Positives = 314/619 (50%), Gaps = 85/619 (13%)
Query: 128 STPPVGLYDETKAGGSEMKSLLADQSCEAVVSNPMDAELRVD--RF--GLSEAWPSLYPA 183
+T P GL D+ A + L A + A + N A L + RF + + + P
Sbjct: 45 ATAPGGLEDKDSA--RRWQDLGARYARYADLENAARAHLVAETRRFLHRIRRSLETPAPE 102
Query: 184 LPNESSTSSEVGSLPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRT 243
PN T+ P EA+I LD+ ++ + G+ +L QLE G T+ ++L ++PR
Sbjct: 103 RPNGKPTA------PPEAAI---LDQPMTKLGGIGPKLAAQLEKLGLTTIGQVLRYYPRD 153
Query: 244 YADLQN-AQIDL-DDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVV 301
Y D N I + G+ +G++ R + + +++ T GD
Sbjct: 154 YLDYSNRTTIKVCQPGEMVTLLGQVRRCRCFTSPRNH---------KLSIFTLTLGD--- 201
Query: 302 NIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMR 361
+GQ + L +FF GTRFT + ++ ++ G V SG V+ RS ++
Sbjct: 202 --GTGQ-----MQLSQFFAGTRFTHRGWQEAQMKQYPRGATVAASGLVK--RSTTGLTLQ 252
Query: 362 EYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQ 421
E ++VL + +DL K P+Y G+ A ++R + AL A DP+P +
Sbjct: 253 EPQLEVLDEGEDLQNLTK--IVPVYALAEGVGAGVVRRAVKAALPFANAFTDPLPAAVRT 310
Query: 422 EFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLL 481
GLL L A +H P+ + AR+RL+FDEFF+LQLG L +
Sbjct: 311 SLGLLDLPGAIRAVHYPESAEHKLQARRRLVFDEFFFLQLGLLQR--------------- 355
Query: 482 DKYRKPRLNAAY-MEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGD 540
++R+ R +A L ++ + LP++ T +Q + E++ DL P PMNRL+QGD
Sbjct: 356 -RHRQKRQSAGIAFRTRGELIEQFYKLLPFAFTGAQKRVVEEVLADLGSPEPMNRLIQGD 414
Query: 541 VGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLT 600
VG GKTVVA +A + + SGYQ A M PTE+LA QHY+ L++ L + H P + L+T
Sbjct: 415 VGSGKTVVAVVAMLTALQSGYQTALMAPTEVLAEQHYQKLVQWLSQL----HLP-VELVT 469
Query: 601 GSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNS 660
GS + R + + L +G++ +V+GTH+LI + V+F+ L L ++DEQ RFGV QR R +
Sbjct: 470 GSVRAARRRDVLRQLASGELNVVVGTHALIQDGVQFANLGLVVIDEQHRFGVGQRARLQN 529
Query: 661 KLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPP 720
K P +L M+ATPIPRTLAL L+GD+ ++QI +LPP
Sbjct: 530 K-----------------------GRNPDLLTMTATPIPRTLALTLHGDLDVSQIDELPP 566
Query: 721 GRIPIKTYIIEGNEKGYEN 739
GR P++T ++ +E+ N
Sbjct: 567 GRKPVRTTVVTPSERTQVN 585
>gi|443647941|ref|ZP_21129849.1| ATP-dependent DNA helicase RecG [Microcystis aeruginosa DIANCHI905]
gi|159028665|emb|CAO88136.1| recG [Microcystis aeruginosa PCC 7806]
gi|443335389|gb|ELS49863.1| ATP-dependent DNA helicase RecG [Microcystis aeruginosa DIANCHI905]
Length = 822
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 201/626 (32%), Positives = 307/626 (49%), Gaps = 80/626 (12%)
Query: 121 FPCITLGSTPPVGLYDETKAGGSEMKSLLADQSCEAVVSNPMDAELRV--DRFGLSEAWP 178
F C++ G PPVG+ + E+ A S NP + V R L +
Sbjct: 36 FLCLSFGDNPPVGIATSERNRWRELAQKFAQYSQ----FNPRQRQQLVAETRNFLQQLRQ 91
Query: 179 SLYPA-LPNESSTSSEVGSLPSEASI----EPLLDKCISCVPGLSKRLYHQLENCGFYTL 233
+L P E + + + + P A + L++ + + + +R LE + +
Sbjct: 92 TLEATPTPKEPAAAKIINTTPITAKANSPRQVTLEQPLKYLAEVGERKASLLERLNLHKV 151
Query: 234 RKLLHHFPRTYADL--QNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIAD 291
LL+++PR + D Q +L +G+ +G + + C S +
Sbjct: 152 EDLLYYYPRDHVDYSRQVNIANLTEGETVTLVGNV-----KRCNCFNS---------PKN 197
Query: 292 TETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRA 351
T+ + ++ +GQ K L +F+ GTR+ + + + + + VG V VSG V+A
Sbjct: 198 TKLAIFELLLQDRTGQIK-----LNRFYAGTRYNNRAWQEGQKKLYPVGSVVAVSGLVKA 252
Query: 352 MRSNNHYEMREYNIDVLKDEDDLSLRAK--GRPYPIYPSKGGLNASLLRDTIARALQALP 409
+ E E+ L D S+ + GR P+YP G+ A L+R + A A+
Sbjct: 253 GKYGLTLENPEFE---LLDSSGGSIESLKIGRILPVYPLTDGVPADLIRKAVVTAFGAVE 309
Query: 410 ANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLE 469
A DP+P + +++GL+ L A IH P + D AR+RL+FDEFF+LQLG L +
Sbjct: 310 AIKDPLPFGLKKQYGLIDLKTAITNIHFPNNSDILSQARRRLVFDEFFFLQLGFLRRR-- 367
Query: 470 GLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQ 529
+ + +A L + + +P+ LT++Q I EI+ DL
Sbjct: 368 -------------QQYRQTQKSAIFSAKGQLIDQFNQIIPFQLTNAQKRVIEEILEDLDS 414
Query: 530 PVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEE 589
PMNRL+QGDVG GKT+V A + + SGYQAA M PTE+LA QHY L+ + +
Sbjct: 415 STPMNRLVQGDVGSGKTIVGVYAILAALQSGYQAALMAPTEVLAEQHYRKLVSWFNLL-- 472
Query: 590 DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQR 649
H P + LLTGST + R I L+TG++ L++GTH+LI + V F L L ++DEQ R
Sbjct: 473 --HLP-VELLTGSTKTAKRREIHAQLETGELPLLVGTHALIQDAVNFRKLGLVVIDEQHR 529
Query: 650 FGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGD 709
FGV QR R SK +PHVL M+ATPIPRTLAL L+GD
Sbjct: 530 FGVQQRARLLSK-----------------------GESPHVLTMTATPIPRTLALTLHGD 566
Query: 710 MSLTQITDLPPGRIPIKTYIIEGNEK 735
+ ++QI +LPPGR PI+T + GN++
Sbjct: 567 LDVSQIDELPPGRQPIQTTALNGNQR 592
>gi|425435636|ref|ZP_18816083.1| ATP-dependent DNA helicase recG [Microcystis aeruginosa PCC 9432]
gi|389679799|emb|CCH91449.1| ATP-dependent DNA helicase recG [Microcystis aeruginosa PCC 9432]
Length = 822
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 202/626 (32%), Positives = 309/626 (49%), Gaps = 80/626 (12%)
Query: 121 FPCITLGSTPPVGLYDETKAGGSEMKSLLADQSCEAVVSNPMDAELRVD--RFGLSEAWP 178
F C++ G PPVG+ + E+ A S NP + V R L +
Sbjct: 36 FLCLSFGDNPPVGIATSERNRWRELAQKFAQYSQ----FNPRQRQQLVTETRNFLQQLRQ 91
Query: 179 SL-YPALPNESSTSSEVGSLPSEASI----EPLLDKCISCVPGLSKRLYHQLENCGFYTL 233
+L P E + + + ++P A + L++ + + + +R LE + +
Sbjct: 92 TLEATTTPKEPAAAKIINTIPIMAKANSPRQVTLEQPLKYLAEVGERKASLLERLNLHKV 151
Query: 234 RKLLHHFPRTYADL--QNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIAD 291
LL+++PR + D Q +L +G+ +G + + C S +
Sbjct: 152 EDLLYYYPRDHVDYSRQVNIANLTEGETVTLVGNV-----KRCNCFNS---------PKN 197
Query: 292 TETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRA 351
T+ + ++ +GQ K L +F+ GTR+ + + + + + VG V VSG V+A
Sbjct: 198 TKLAIFELLLQDRTGQIK-----LNRFYAGTRYNNRAWQEGQKKLYPVGSVVAVSGLVKA 252
Query: 352 MRSNNHYEMREYNIDVLKDEDDLSLRAK--GRPYPIYPSKGGLNASLLRDTIARALQALP 409
+ E E+ L D S+ + GR P+YP G+ A L+R + A A+
Sbjct: 253 GKYGLTLENPEFE---LLDSSGASIESLKIGRILPVYPLTDGVPADLIRKAVVAAFGAVE 309
Query: 410 ANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLE 469
A DP+P + +++GL+ L A IH P + + AR+RL+FDEFF+LQLG L + +
Sbjct: 310 AIKDPLPFGLRKQYGLIDLKTAITNIHFPNNSEILSQARRRLVFDEFFFLQLGFLRRRQQ 369
Query: 470 GLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQ 529
TQ +A L + + +P+ LT++Q I EI+ DL
Sbjct: 370 YRQTQ---------------KSAVFSARGQLIDQFNQIIPFQLTNAQKRVIEEILEDLDS 414
Query: 530 PVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEE 589
PMNRL+QGDVG GKT+V A + + SGYQAA M PTE+LA QHY L+ + +
Sbjct: 415 STPMNRLVQGDVGSGKTIVGVYAILAALQSGYQAALMAPTEVLAEQHYRKLVSWFNLL-- 472
Query: 590 DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQR 649
H P + LLTGST + R I L+TG++ L++GTH+LI + V F L L ++DEQ R
Sbjct: 473 --HLP-VELLTGSTKTAKRREIHAQLETGELPLLVGTHALIQDAVNFRKLGLVVIDEQHR 529
Query: 650 FGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGD 709
FGV QR R SK +PHVL M+ATPIPRTLAL L+GD
Sbjct: 530 FGVQQRARLLSK-----------------------GESPHVLTMTATPIPRTLALTLHGD 566
Query: 710 MSLTQITDLPPGRIPIKTYIIEGNEK 735
+ ++QI +LPPGR PI+T + GN++
Sbjct: 567 LDVSQIDELPPGRQPIQTTALNGNQR 592
>gi|425470445|ref|ZP_18849315.1| ATP-dependent DNA helicase recG [Microcystis aeruginosa PCC 9701]
gi|389883945|emb|CCI35717.1| ATP-dependent DNA helicase recG [Microcystis aeruginosa PCC 9701]
Length = 822
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 200/626 (31%), Positives = 307/626 (49%), Gaps = 80/626 (12%)
Query: 121 FPCITLGSTPPVGLYDETKAGGSEMKSLLADQSCEAVVSNPMDAELRVD--RFGLSEAWP 178
F C++ G PPVG+ + E+ A S NP + V R L +
Sbjct: 36 FLCLSFGDNPPVGIATSERNRWRELAQKFAQYSQ----FNPRQRQQLVTETRNFLQQLRQ 91
Query: 179 SLYPA-LPNESSTSSEVGSLPSEASI----EPLLDKCISCVPGLSKRLYHQLENCGFYTL 233
+L P E + + + + P A + L++ + + + +R LE + +
Sbjct: 92 TLEATPTPKEPAAAKIINTTPITAKTNSPRQVTLEQPLKYLAEVGERKASLLERLNLHKV 151
Query: 234 RKLLHHFPRTYADL--QNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIAD 291
LL+++PR + D Q +L +G+ +G + + C S +
Sbjct: 152 EDLLYYYPRDHVDYSRQVNIANLTEGETVTLVGNV-----KRCNCFNS---------PKN 197
Query: 292 TETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRA 351
T+ + ++ +GQ K L +F+ GTR+ + + + + + VG V VSG V+A
Sbjct: 198 TKLAIFELLLQDRTGQIK-----LNRFYAGTRYNNRAWQEGQKKLYPVGSVVAVSGLVKA 252
Query: 352 MRSNNHYEMREYNIDVLKDEDDLSLRAK--GRPYPIYPSKGGLNASLLRDTIARALQALP 409
+ E E+ L D S+ + GR P+YP G+ A L+R + A A+
Sbjct: 253 GKYGLTLENPEFE---LLDSSGASIESLKIGRILPVYPLTDGVPADLIRKAVVAAFGAVE 309
Query: 410 ANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLE 469
A DP+P + +++GL+ L A IH P + + AR+RL+FDEFF+LQLG L +
Sbjct: 310 AIKDPLPFGLRKQYGLIDLKTAITNIHFPNNAEILSQARRRLVFDEFFFLQLGFLRRR-- 367
Query: 470 GLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQ 529
+ + +A L + + +P+ LT++Q I EI+ DL
Sbjct: 368 -------------QQYRQTQKSAIFSANGQLIDRFNQIIPFQLTNAQKRVIEEILEDLDS 414
Query: 530 PVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEE 589
PMNRL+QGDVG GKT+V A + + SGYQAA M PTE+LA QHY L+ + +
Sbjct: 415 STPMNRLVQGDVGSGKTIVGVYAILAALQSGYQAALMAPTEVLAEQHYRKLVSWFNLL-- 472
Query: 590 DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQR 649
H P + LLTGST + R I L+TG++ L++GTH+LI + V F L L ++DEQ R
Sbjct: 473 --HLP-VELLTGSTKTAKRREIHAQLETGELPLLVGTHALIQDAVNFRKLGLVVIDEQHR 529
Query: 650 FGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGD 709
FGV QR R SK +PHVL M+ATPIPRTLAL L+GD
Sbjct: 530 FGVQQRARLLSK-----------------------GESPHVLTMTATPIPRTLALTLHGD 566
Query: 710 MSLTQITDLPPGRIPIKTYIIEGNEK 735
+ ++QI +LPPGR PI+T + GN++
Sbjct: 567 LDVSQIDELPPGRQPIQTTALNGNQR 592
>gi|425455883|ref|ZP_18835594.1| ATP-dependent DNA helicase recG [Microcystis aeruginosa PCC 9807]
gi|389803138|emb|CCI17899.1| ATP-dependent DNA helicase recG [Microcystis aeruginosa PCC 9807]
Length = 822
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 202/626 (32%), Positives = 308/626 (49%), Gaps = 80/626 (12%)
Query: 121 FPCITLGSTPPVGLYDETKAGGSEMKSLLADQSCEAVVSNPMDAELRV--DRFGLSEAWP 178
F C++ G PPVG+ + E+ A S NP + V R L +
Sbjct: 36 FFCLSFGDNPPVGISTSERNRWRELAQKFAQYSQ----FNPRQRQQLVAETRNFLQQLRQ 91
Query: 179 SLYPA-LPNESSTSSEVGSLPSEASI----EPLLDKCISCVPGLSKRLYHQLENCGFYTL 233
+L P E + + + + P A + L++ + + + +R LE + +
Sbjct: 92 TLEATPTPKEPAVAKIINTTPITAKANSPRQVTLEQPLKYLAEVGERKASLLERLNLHKV 151
Query: 234 RKLLHHFPRTYADL--QNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIAD 291
LL+++PR + D Q +L +G+ +G + + C S +
Sbjct: 152 EDLLYYYPRDHVDYSRQVNIANLTEGETVTLVGNV-----KRCNCFTS---------PKN 197
Query: 292 TETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRA 351
T+ + ++ +GQ K L +F+ GTR+ + + + + + VG V VSG V+A
Sbjct: 198 TKLAIFELLLQDRTGQIK-----LNRFYAGTRYNNRAWQEGQKKLYPVGSVVAVSGLVKA 252
Query: 352 MRSNNHYEMREYNIDVLKDEDDLSLRAK--GRPYPIYPSKGGLNASLLRDTIARALQALP 409
+ E E+ L D S+ + GR P+YP G+ A L+R + A A+
Sbjct: 253 GKYGLTLENPEFE---LLDSSGASIESLKIGRILPVYPLTDGVPADLIRKAVVAAFGAVE 309
Query: 410 ANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLE 469
A DP+P + +++GL+ L A IH P + + AR+RL+FDEFF+LQLG L + +
Sbjct: 310 AIKDPLPFGLRKQYGLIDLKTAITNIHFPNNAEILSQARRRLVFDEFFFLQLGFLRRRQQ 369
Query: 470 GLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQ 529
TQ +A L + + +P+ LT++Q I EI+ DL
Sbjct: 370 YRQTQ---------------KSAIFSAKGQLIDQFNQIIPFQLTNAQKRVIEEILEDLDS 414
Query: 530 PVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEE 589
PMNRL+QGDVG GKT+V A + + SGYQAA M PTE+LA QHY L+ + +
Sbjct: 415 STPMNRLVQGDVGSGKTIVGVYAILAALQSGYQAALMAPTEVLAEQHYRKLVSWFNLL-- 472
Query: 590 DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQR 649
H P + LLTGST + R I L+TG++ L++GTH+LI + V F L L ++DEQ R
Sbjct: 473 --HLP-VELLTGSTKTAKRREIHAQLETGELPLLVGTHALIQDAVNFRKLGLVVIDEQHR 529
Query: 650 FGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGD 709
FGV QR R SK +PHVL M+ATPIPRTLAL L+GD
Sbjct: 530 FGVQQRARLLSK-----------------------GESPHVLTMTATPIPRTLALTLHGD 566
Query: 710 MSLTQITDLPPGRIPIKTYIIEGNEK 735
+ ++QI +LPPGR PI+T + GN++
Sbjct: 567 LDVSQIDELPPGRQPIQTTALNGNQR 592
>gi|425462088|ref|ZP_18841562.1| ATP-dependent DNA helicase recG [Microcystis aeruginosa PCC 9808]
gi|389824939|emb|CCI25679.1| ATP-dependent DNA helicase recG [Microcystis aeruginosa PCC 9808]
Length = 822
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 202/626 (32%), Positives = 308/626 (49%), Gaps = 80/626 (12%)
Query: 121 FPCITLGSTPPVGLYDETKAGGSEMKSLLADQSCEAVVSNPMDAELRV--DRFGLSEAWP 178
F C++ G PPVG+ + E+ A S NP + V R L +
Sbjct: 36 FLCLSFGDNPPVGIATSERNRWRELAQKFAQYSQ----FNPRQRQQLVAETRNFLQQLRQ 91
Query: 179 SLYPA-LPNESSTSSEVGSLPSEASI----EPLLDKCISCVPGLSKRLYHQLENCGFYTL 233
+L P E + + + + P A + L++ + + + +R LE + +
Sbjct: 92 TLEATPTPKEPAAAKIINTTPITAKANSPRQVTLEQPLKYLAEVGERKASLLERLNLHKV 151
Query: 234 RKLLHHFPRTYADL--QNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIAD 291
LL+++PR + D Q +L +G+ +G + + C S +
Sbjct: 152 EDLLYYYPRDHVDYSRQVNIANLTEGETVTLVGNV-----KRCNCFNS---------PKN 197
Query: 292 TETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRA 351
T+ + ++ +GQ K L +F+ GTR+ + + + + + VG V VSG V+A
Sbjct: 198 TKLAIFELLLQDRTGQIK-----LNRFYAGTRYNNRAWQEGQKKLYPVGSVVAVSGLVKA 252
Query: 352 MRSNNHYEMREYNIDVLKDEDDLSLRAK--GRPYPIYPSKGGLNASLLRDTIARALQALP 409
+ E E+ L D S+ + GR P+YP G+ A L+R + A A+
Sbjct: 253 GKYGLTLENPEFE---LLDSSGASIESLKIGRILPVYPLTDGVPADLIRKAVVAAFGAVE 309
Query: 410 ANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLE 469
A DP+P + +++GL+ L A IH P + + AR+RL+FDEFF+LQLG L + +
Sbjct: 310 AIKDPLPFGLRKQYGLIDLKTAITNIHFPNNSEILSQARRRLVFDEFFFLQLGFLRRRQQ 369
Query: 470 GLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQ 529
TQ +A L + + +P+ LT++Q I EI+ DL
Sbjct: 370 YRQTQ---------------KSAIFSAKGQLIDQFNQIIPFQLTNAQKRVIEEILEDLDS 414
Query: 530 PVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEE 589
PMNRL+QGDVG GKT+V A + + SGYQAA M PTE+LA QHY L+ + +
Sbjct: 415 STPMNRLVQGDVGSGKTIVGVYAILAALQSGYQAALMAPTEVLAEQHYRKLVSWFNLL-- 472
Query: 590 DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQR 649
H P + LLTGST + R I L+TG++ L++GTH+LI + V F L L ++DEQ R
Sbjct: 473 --HLP-VELLTGSTKTAKRREIHAQLETGELPLLVGTHALIQDAVNFRKLGLVVIDEQHR 529
Query: 650 FGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGD 709
FGV QR R SK +PHVL M+ATPIPRTLAL L+GD
Sbjct: 530 FGVQQRARLLSK-----------------------GESPHVLTMTATPIPRTLALTLHGD 566
Query: 710 MSLTQITDLPPGRIPIKTYIIEGNEK 735
+ ++QI +LPPGR PI+T + GN++
Sbjct: 567 LDVSQIDELPPGRQPIQTTALNGNQR 592
>gi|428206666|ref|YP_007091019.1| ATP-dependent DNA helicase RecG [Chroococcidiopsis thermalis PCC
7203]
gi|428008587|gb|AFY87150.1| ATP-dependent DNA helicase RecG [Chroococcidiopsis thermalis PCC
7203]
Length = 857
Score = 285 bits (729), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 197/571 (34%), Positives = 293/571 (51%), Gaps = 83/571 (14%)
Query: 182 PALPNESS------TSSEVGSLPSEAS--IEPLLDKCISCVPGLSKRLYHQLENCGFYTL 233
P LP S TS+ + + SE + + P L++ ++ +P + R L G YT+
Sbjct: 127 PPLPTPDSPVVQPKTSTLISTKSSEINQRLAPSLEQPLTRLPEIGARRGEILAKLGLYTV 186
Query: 234 RKLLHHFPRTYADL--QNAQIDLDDGQYFIFIGEIISSRGMKA--GCSFSFLEVIVGCEI 289
R +L ++PR + + Q +L+ G+ +G + + + S LE+
Sbjct: 187 RDVLLYYPRDHINYARQVKICNLEAGETATLVGTVKKCQCFTSPRNAKLSILEI------ 240
Query: 290 ADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKV 349
V+ ++GQ + L FF G R++ + + + K+ G + SG V
Sbjct: 241 ----------VLKDNTGQ-----IRLNYFFAGGRYSHRGWQEQQKRKYPPGAVIAASGLV 285
Query: 350 RAMRSNNHYEMREYNIDVLKDE-DDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQAL 408
+ S + + ++VL D + GR PIYP G+ A ++R + AL +L
Sbjct: 286 K--ESKYGLTLDKPALEVLAHPGDTIDSLTVGRVVPIYPLTEGVGADMVRKAVTTALPSL 343
Query: 409 PANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQML 468
DP+PK + +G + + +A IH P D +LAR+RL+FDEFFYLQLG
Sbjct: 344 VHLKDPLPKALRDYYGFVEVREAIANIHFPADTDALELARRRLVFDEFFYLQLG------ 397
Query: 469 EGLGTQFEKEGLLDKYRKPR--LNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWD 526
LL + K R N+A + L +K + LP+ LT +Q I++I+ D
Sbjct: 398 -----------LLQRQYKARQIANSAVLSPSGQLVEKFYQLLPFKLTGAQQRVINDILND 446
Query: 527 LKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDN 586
LK+ VPMNRL+QGDVG GKTVVA +A + I SGYQ A M PTE+LA QHY L+ +
Sbjct: 447 LKKSVPMNRLVQGDVGSGKTVVAVVAILAAIQSGYQGALMAPTEVLAEQHYRKLVGWFNL 506
Query: 587 MEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDE 646
+ H P + LLTGSTP + R I L+TG++ L++GTH+LI +KV F L L ++DE
Sbjct: 507 L----HLP-VELLTGSTPAAKRRQIHAQLETGELPLLVGTHALIQDKVIFQRLGLVVIDE 561
Query: 647 QQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALAL 706
Q RFGV QR R K +PHVL M+ATPIPRTLAL L
Sbjct: 562 QHRFGVGQRARLQQK-----------------------GESPHVLTMTATPIPRTLALTL 598
Query: 707 YGDMSLTQITDLPPGRIPIKTYIIEGNEKGY 737
+GD+ ++QI +LPPGR I T ++ E+ +
Sbjct: 599 HGDLDVSQIDELPPGRQKIHTTVLSSKERSH 629
>gi|218246338|ref|YP_002371709.1| ATP-dependent DNA helicase RecG [Cyanothece sp. PCC 8801]
gi|218166816|gb|ACK65553.1| ATP-dependent DNA helicase RecG [Cyanothece sp. PCC 8801]
Length = 819
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 193/542 (35%), Positives = 279/542 (51%), Gaps = 81/542 (14%)
Query: 204 EPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADL--QNAQIDLDDGQYFI 261
E LD+ +S + + L+ G +T++ LL ++PR + D Q + L+ G+
Sbjct: 119 EITLDQPLSAIAEVGYSKAELLKRLGLFTVKDLLFYYPRDHIDYARQVSISRLNPGETVT 178
Query: 262 FIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRG 321
+G + + C S + S E++ D+ K K L +FF G
Sbjct: 179 IVGSV-----KRCNCFTS----------PKNKNLSIFELILQDNTGKIK----LNRFFAG 219
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMR-----SNNHYEMREY---NIDVLKDEDD 373
TRFT+ + + + + +G V SG V+ R N E+ + NI+ LK
Sbjct: 220 TRFTNRGWQEKQKKLYPLGAIVAASGLVKQNRFGLTLDNPEIEVLDSLGSNIESLK---- 275
Query: 374 LSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYM 433
GR P+YP G+ A L+R I L A+ DP+P + ++GL+ L DA
Sbjct: 276 -----IGRVLPVYPLTEGVPADLIRRAIVACLGAIKQIRDPLPVGLRNQYGLIPLKDAIA 330
Query: 434 GIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAY 493
IH P+ AR+RL+FDEFFYLQLG L + E EK + K
Sbjct: 331 NIHFPETPALLTHARRRLVFDEFFYLQLGFLQRRQEQ--KHLEKSAIFLPQGK------L 382
Query: 494 MEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLAC 553
+E ++ L LP+ LT++Q I+EI+ DL PMNRL+QGDVG GKT+VA +
Sbjct: 383 IENFNQL-------LPFKLTNAQQRVINEILEDLNSSTPMNRLVQGDVGAGKTIVAVFSI 435
Query: 554 MEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRK 613
+ I SGYQAA M PTE+LA QHY L+ + + H P + LLTGST + + R I
Sbjct: 436 LAAIQSGYQAALMAPTEVLAEQHYRKLVTWFNLL----HLP-VELLTGSTKIAKRREIHS 490
Query: 614 DLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAM 673
L+TG++ L++GTH+LI +KV F L L ++DEQ RFGV QR + +K
Sbjct: 491 QLETGELPLLVGTHALIQDKVNFQRLGLVVIDEQHRFGVQQRAKLLAK------------ 538
Query: 674 VNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN 733
+PHVL M+ATPIPRTLAL L+GD+ ++QI +LPPGR PI+T + G
Sbjct: 539 -----------GQSPHVLTMTATPIPRTLALTLHGDLDVSQIDELPPGRQPIQTTALIGK 587
Query: 734 EK 735
E+
Sbjct: 588 ER 589
>gi|16331409|ref|NP_442137.1| ATP-dependent DNA helicase RecG [Synechocystis sp. PCC 6803]
gi|383323150|ref|YP_005384003.1| DNA recombinase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383326319|ref|YP_005387172.1| DNA recombinase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383492203|ref|YP_005409879.1| DNA recombinase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384437471|ref|YP_005652195.1| DNA recombinase [Synechocystis sp. PCC 6803]
gi|451815562|ref|YP_007452014.1| DNA recombinase [Synechocystis sp. PCC 6803]
gi|3914638|sp|Q55681.1|RECG_SYNY3 RecName: Full=ATP-dependent DNA helicase RecG
gi|1001580|dbj|BAA10207.1| DNA recombinase [Synechocystis sp. PCC 6803]
gi|339274503|dbj|BAK50990.1| DNA recombinase [Synechocystis sp. PCC 6803]
gi|359272469|dbj|BAL29988.1| DNA recombinase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359275639|dbj|BAL33157.1| DNA recombinase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359278809|dbj|BAL36326.1| DNA recombinase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|451781531|gb|AGF52500.1| DNA recombinase [Synechocystis sp. PCC 6803]
Length = 831
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 190/541 (35%), Positives = 274/541 (50%), Gaps = 69/541 (12%)
Query: 198 PSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDG 257
P IE L ++ V S+ L+N G T+ LL +FPR Y D
Sbjct: 127 PKSGQIE--LHTPLATVVSQSQHQTKLLKNLGLATVEDLLFYFPRDYLDYAQQ------- 177
Query: 258 QYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNID-SGQKKKIYLHLK 316
+ I E + AG + + + +V C + ++ I Q +I L
Sbjct: 178 ---VTIAE------LTAGETVTIVGRVVNCTCFTSPKNQNLNILQIQLRDQTGRI--KLS 226
Query: 317 KFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSL 376
+F+ G RF + + I+ + V SG V++ S + I+VL D S+
Sbjct: 227 RFYAGKRFAHRGWQEKIKKLYPPQAVVAASGLVKS--SKFGLTLDNPEIEVL-DRHSPSI 283
Query: 377 RA--KGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMG 434
+ GR P+YP G+ A LR + A+ DP+P+EI +++ L+ L A
Sbjct: 284 DSFKVGRVLPVYPLTEGITADFLRKLVLACQTAIAKLSDPLPQEIREKYELIDLQTAIAQ 343
Query: 435 IHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYM 494
IH P++ ++ LAR+RL+FDEFFYLQLG L + E +K + +A
Sbjct: 344 IHFPENTEKLSLARRRLVFDEFFYLQLGFLQRRYE---------------QKQQQQSAIF 388
Query: 495 EGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACM 554
L +K LP+ LT +Q ++EI+ DL +P PMNRL+QGDVG GKTVV A +
Sbjct: 389 TPHGELLEKFSDLLPFRLTQAQQRVVNEILQDLNKPSPMNRLVQGDVGSGKTVVGVFAIL 448
Query: 555 EVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKD 614
+ GYQAA M PTE+LA QHY+ L+ + + + P + LLTGST + R I
Sbjct: 449 AALQGGYQAALMAPTEVLAEQHYQKLVSWFNLL----YLP-VELLTGSTKTAKRREIHAQ 503
Query: 615 LQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMV 674
L TG + L++GTH+LI E V F L L ++DEQ RFGV QR + +K
Sbjct: 504 LSTGQLPLLVGTHALIQETVNFQRLGLVVIDEQHRFGVQQRAKLLAK------------- 550
Query: 675 NSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
G+ APHVL+M+ATPIPRTLAL L+GD+ ++QI +LPPGR PI T +I E
Sbjct: 551 ---GN-------APHVLSMTATPIPRTLALTLHGDLEVSQIDELPPGRQPIHTSVITAKE 600
Query: 735 K 735
+
Sbjct: 601 R 601
>gi|257059384|ref|YP_003137272.1| ATP-dependent DNA helicase RecG [Cyanothece sp. PCC 8802]
gi|256589550|gb|ACV00437.1| ATP-dependent DNA helicase RecG [Cyanothece sp. PCC 8802]
Length = 819
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 193/542 (35%), Positives = 278/542 (51%), Gaps = 81/542 (14%)
Query: 204 EPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADL--QNAQIDLDDGQYFI 261
E LD+ +S + + L+ G +T++ LL ++PR + D Q + L+ G+
Sbjct: 119 EITLDQPLSAIAEVGYSKAELLKRLGLFTVKDLLFYYPRDHIDYARQVSISRLNPGETVT 178
Query: 262 FIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRG 321
+G + + C S + S E+ D+ K K L +FF G
Sbjct: 179 IVGSV-----KRCNCFTS----------PKNKNLSIFELFLQDNTGKIK----LNRFFAG 219
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMR-----SNNHYEMRE---YNIDVLKDEDD 373
TRFT+ + + + + +G V SG V+ R N E+ + NI+ LK
Sbjct: 220 TRFTNRGWQEKQKKLYPLGAIVAASGLVKQNRFGLTLDNPEIEVLDSLGSNIESLK---- 275
Query: 374 LSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYM 433
GR P+YP G+ A L+R I L A+ DP+P + ++GL+ L DA
Sbjct: 276 -----IGRVLPVYPLTEGVPADLIRRAIVACLGAIKQIRDPLPVGLRNQYGLIPLKDAIA 330
Query: 434 GIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAY 493
IH P+ AR+RL+FDEFFYLQLG L + E EK + K
Sbjct: 331 NIHFPETPALLTHARRRLVFDEFFYLQLGFLQRRQE--QKHLEKSAIFLPQGK------L 382
Query: 494 MEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLAC 553
+E ++ L LP+ LT++Q I+EI+ DL PMNRL+QGDVG GKT+VA +
Sbjct: 383 IENFNQL-------LPFKLTNAQQRVINEILEDLNSSTPMNRLVQGDVGAGKTIVAVFSI 435
Query: 554 MEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRK 613
+ I SGYQAA M PTE+LA QHY L+ + + H P + LLTGST + + R I
Sbjct: 436 LAAIQSGYQAALMAPTEVLAEQHYRKLVTWFNLL----HLP-VELLTGSTKIAKRREIHS 490
Query: 614 DLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAM 673
L+TG++ L++GTH+LI +KV F L L ++DEQ RFGV QR + +K
Sbjct: 491 QLETGELPLLVGTHALIQDKVNFQRLGLVVIDEQHRFGVQQRAKLLAK------------ 538
Query: 674 VNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN 733
+PHVL M+ATPIPRTLAL L+GD+ ++QI +LPPGR PI+T + G
Sbjct: 539 -----------GQSPHVLTMTATPIPRTLALTLHGDLDVSQIDELPPGRQPIQTTALMGK 587
Query: 734 EK 735
E+
Sbjct: 588 ER 589
>gi|427712116|ref|YP_007060740.1| ATP-dependent DNA helicase RecG [Synechococcus sp. PCC 6312]
gi|427376245|gb|AFY60197.1| ATP-dependent DNA helicase RecG [Synechococcus sp. PCC 6312]
Length = 801
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 186/531 (35%), Positives = 282/531 (53%), Gaps = 63/531 (11%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGE 265
+L++ ++ + GL+K +L+ G T+R LL ++PR + D Q+ + + + GE
Sbjct: 104 VLNQGLNTLSGLNKWGIERLQKLGLLTIRDLLFYYPRDHIDYAR-QVPIRE----LVPGE 158
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFT 325
++ G C V + + T D ++ +GQ L L +F+ GTRFT
Sbjct: 159 TVTLVGTVRRCQ-------VFTSPKNQKLTILDIIIQDRTGQ-----LKLSRFYMGTRFT 206
Query: 326 SIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDED-DLSLRAKGRPYP 384
+ + + + + + SG V+A + + + +I+VL ++ GR P
Sbjct: 207 NRGWQEQQKRLYAPQTIIAASGLVKAGKYG--LTLEDPDIEVLDQAGGNIESLTIGRIVP 264
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
+YP G++ L+R ++ AL DP+P E+ Q L+ L A IH P +
Sbjct: 265 VYPLTEGVSPDLIRKSVQLALPYAEQLSDPLPLELRQAQDLIDLPTALNQIHFPDDHEML 324
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
LAR+RL+FDEFFYLQLG L + + Q ++ + +L ++
Sbjct: 325 GLARRRLVFDEFFYLQLGLLRRRQQQQAEQ---------------KSSPLTPTGTLLEEF 369
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
+ LP+ LT +Q + EI+ DL+QP+PMNRL+QGDVG GKTVVA +A + I SGYQ A
Sbjct: 370 YQILPFQLTKAQQRVVQEILQDLEQPIPMNRLVQGDVGSGKTVVAVIAMLAAIQSGYQTA 429
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
M PTE+LA QHY L+ L + H P + LLTGST + R I LQTG++ +++
Sbjct: 430 LMAPTEVLAEQHYRKLVAWLTQL----HLP-VELLTGSTKAAKRRQIHSHLQTGELAVLV 484
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+LI + VEF+ L L ++DEQ RFGV QR + K +
Sbjct: 485 GTHALIQDAVEFNRLGLVVIDEQHRFGVEQRAKLQQKGVF-------------------- 524
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
PHVL M+ATPIPRTLAL L+GD+ ++QI +LPPGR PI+T I+ E+
Sbjct: 525 ---PHVLTMTATPIPRTLALTLHGDLDVSQIDELPPGRQPIQTTILGRGER 572
>gi|359458931|ref|ZP_09247494.1| ATP-dependent DNA helicase RecG [Acaryochloris sp. CCMEE 5410]
Length = 825
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 186/536 (34%), Positives = 277/536 (51%), Gaps = 71/536 (13%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
LD I + G+ + +LE G Y++R LL ++PR + D
Sbjct: 128 LDLPILSLSGIGPKSAQKLEKLGLYSVRDLLFYYPRDHIDYARQ---------------- 171
Query: 267 ISSRGMKAGCSFSFLEVI--VGC--EIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGT 322
+S R ++ G + + + + V C + + T + VV +GQ K L +F+ G
Sbjct: 172 VSIRDLEEGATVTLVATVRRVNCFSSPRNPKLTIFELVVKDATGQVK-----LSRFYAGN 226
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDE-DDLSLRAKGR 381
RF S + + + + G V SG V++ S + +++VL D + GR
Sbjct: 227 RFRSRGWQEQQKRLYPPGAVVAASGLVKS--SKYGITLDNPDLEVLNHSGDKIESMVIGR 284
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
PIY G+ L+R + AL A + DP+P+ + Q+ L L A +H P
Sbjct: 285 VVPIYALTEGVTPDLVRRAVVAALPAAKSLRDPLPEGLRQQNNLTDLPSAIADVHFPPDS 344
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
D D AR+RLIFDEFFYLQLG L + + ++ + + L
Sbjct: 345 DALDRARRRLIFDEFFYLQLGML---------------VRRQQQRQTQESVPLSVHGELL 389
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
++ LP++LT +Q + +I+ DL+ PMNRL+QGDVG GKTVVA +A + I SGY
Sbjct: 390 ERFYEVLPFTLTGAQQRVLQDILADLQSSKPMNRLVQGDVGSGKTVVAVIALLSAIQSGY 449
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q A M PTE+LA QHY L++ + + H P + LLTGST + R I + L+TG++
Sbjct: 450 QTALMAPTEVLAEQHYHKLVEWFNQL----HLP-VDLLTGSTKAAKRRQIAEQLKTGELP 504
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
L++GTH+LI + VEF L LA++DEQ RFGV QR AM+ G
Sbjct: 505 LLVGTHALIQDNVEFDRLGLAVIDEQHRFGVQQR----------------AMLQQKG--- 545
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGY 737
QH PHVL M+ATPIPRTLAL L+GD+ ++QI +LPPGR I+T ++ ++ +
Sbjct: 546 --QH--PHVLTMTATPIPRTLALTLHGDLDVSQIDELPPGRQAIQTTMLTTRDRAH 597
>gi|332708716|ref|ZP_08428688.1| ATP-dependent DNA helicase RecG [Moorea producens 3L]
gi|332352570|gb|EGJ32138.1| ATP-dependent DNA helicase RecG [Moorea producens 3L]
Length = 828
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 204/641 (31%), Positives = 319/641 (49%), Gaps = 99/641 (15%)
Query: 121 FPCITLGSTPPVGLYDETKAG---GSEMK--SLLADQSCEAVVSNPM----DAELRVDRF 171
F C++ G TP V E + G++ S + Q + +V++ D + R
Sbjct: 35 FLCLSFGKTPNVLTSTEKRRWQDIGNQFARYSQMTLQQRQHLVADTRRFLNDLKQNTQRR 94
Query: 172 GLSEAWPSLYPA--------LPNESSTSSEVGSLPSEASIEPLLDKCISCVPGLSKRLYH 223
+ + + + +P L + SSE+GS + LD ++ + + +
Sbjct: 95 LVEDKYQTEHPMVRVPKTKPLVEKQQASSELGSKKN-------LDLPLAKLAAVGSKNSE 147
Query: 224 QLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCS-FSFLE 282
L G + +R LL+++PR + + Q+++ D + GE ++ G C+ FS
Sbjct: 148 YLARLGLHKVRDLLYYYPRDHINYAR-QVNMAD----LVPGETVTIMGTVKRCNCFS--- 199
Query: 283 VIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEF 342
+ + T D V+ +GQ K L +FF G R+++ + + ++ VG
Sbjct: 200 -----SPRNKKLTILDIVLKDSTGQIK-----LSRFFAGFRYSNRSWQYQQKRRYPVGAV 249
Query: 343 VCVSGKVRAMRSNNHY--EMREYNIDVLKDE----DDLSLRAKGRPYPIYPSKGGLNASL 396
V SG V+ N Y + + ++VL+ D + + GR P+Y G+ A +
Sbjct: 250 VAASGLVK----KNKYGITLEDPELEVLEHPGGTIDSMKI---GRVVPVYSLTEGVPADM 302
Query: 397 LRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEF 456
+R I AL +P+P +E+GL+ + DA IH P++ D AR+RL+FDEF
Sbjct: 303 VRRAIIAALPYTSLIKEPLPVTFRKEYGLMGVCDAIANIHFPQNADTLADARRRLVFDEF 362
Query: 457 FYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQ 516
YLQLG L + TQ ++A M L + + LP+ LT +Q
Sbjct: 363 LYLQLGFLQRRQAQRKTQ---------------SSAVMAPIGKLFDQFNQLLPFELTGAQ 407
Query: 517 LSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQH 576
I+EI+ D++ PMNRL+QGDVG GKT+VA A + I SGYQAA M PTE+LA QH
Sbjct: 408 TRVINEILKDMESETPMNRLVQGDVGSGKTIVAVYAIIAAIQSGYQAALMAPTEVLAEQH 467
Query: 577 YEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEF 636
Y L+ + + H P + LLTGST V + R I L+TG++ L++GTH+LI + V F
Sbjct: 468 YRKLVNWFNLL----HLP-VELLTGSTKVSKRRKIHSQLETGELPLLVGTHALIQDPVNF 522
Query: 637 SALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSAT 696
+ L L ++DEQ RFGV QR R K +PHVL ++AT
Sbjct: 523 NNLGLVVIDEQHRFGVKQRARLQQK-----------------------GQSPHVLTLTAT 559
Query: 697 PIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGY 737
PIPRTLAL L+GD+ ++QI +LPPGR I+T ++ G E+ +
Sbjct: 560 PIPRTLALTLHGDLDVSQIDELPPGRQKIQTTVLRGKERKH 600
>gi|119511272|ref|ZP_01630387.1| DNA helicase [Nodularia spumigena CCY9414]
gi|119464063|gb|EAW44985.1| DNA helicase [Nodularia spumigena CCY9414]
Length = 823
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 211/653 (32%), Positives = 313/653 (47%), Gaps = 99/653 (15%)
Query: 104 ADKDAMDDFDISLACKRFPCITLGSTPPVGLYDETKAGGSEMKSLLADQ-SCEAVVSNPM 162
ADK D F C+T G P L + E+ + A+ E +
Sbjct: 19 ADKGFTDLIGKQYRFSEFLCLTFGKFP-TALPSVERGRWQELAAKFANYPHLEESERQHL 77
Query: 163 DAELRVDRFGLSEAWPSLYPALPNESST----------SSEVGSLPSEAS--IEPLLDKC 210
AE R + L + P ESST S + +E S + P +D+
Sbjct: 78 VAETRRYLYQLQQE--------PKESSTEKSQIYQRQNSQPKSPIVAEVSRRLAPKIDQK 129
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
+S +P + R +L T+R LL+++PR + D + IGE
Sbjct: 130 LSDLPEIGPRQADKLAALNLLTVRDLLYYYPRDHIDYARQ----------VNIGE----- 174
Query: 271 GMKAGCSFSFLEVIVGCEI---ADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
++ G + + + + C + S E+V D+ + KI +F G RF S
Sbjct: 175 -LQGGETVTIIANVKRCNCFTSPKNKKLSILELVLKDNTGEIKI----TRFSAGARFASR 229
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMR-----SNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
+ + ++ ++ VG + G V+ + N E+ + D + D L++ GR
Sbjct: 230 GWQEGLKRRYPVGSILAACGLVKESKYGLTLDNPELEVLAHPGDAI---DSLTI---GRV 283
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHID 442
PIY G+ A+++R I AL A DP+PK + ++ L+ L DA IH P
Sbjct: 284 VPIYALTEGVMATMVRQAITAALPATVHLKDPLPKGLRTKYNLMELKDAIANIHFPDESA 343
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
AR+RL+FDEFFYLQLG L + + Q +A + L +
Sbjct: 344 TLQAARRRLVFDEFFYLQLGLLQRQHQARQIQ---------------TSAILAPKGQLVE 388
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
K LP+ LT +Q +++I+ DL++ PMNRL+QGDVG GKTVVA +A + I SGYQ
Sbjct: 389 KFSEILPFELTGAQQRVLNDILTDLEKSTPMNRLIQGDVGSGKTVVAVIAILAAIQSGYQ 448
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
AA M PTE+LA QHY L+ + + H P + LLTGST V + R I L TG++ L
Sbjct: 449 AALMAPTEVLAEQHYRKLVSWFNLL----HLP-VELLTGSTKVAKRREIHSQLVTGELPL 503
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
++GTH+LI + V F+ L L ++DEQ RFGV QR K
Sbjct: 504 LVGTHALIQDTVNFNQLGLVVIDEQHRFGVKQRALLQQ--------------------KG 543
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
DQ PHVL M+ATPIPRTLAL ++GDM+++QI +LPPGR I+T ++ G ++
Sbjct: 544 DQ---PHVLTMTATPIPRTLALTIHGDMNVSQIDELPPGRQKIQTTMLTGKQR 593
>gi|284929234|ref|YP_003421756.1| ATP-dependent DNA helicase RecG [cyanobacterium UCYN-A]
gi|284809678|gb|ADB95375.1| ATP-dependent DNA helicase RecG [cyanobacterium UCYN-A]
Length = 813
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 192/556 (34%), Positives = 291/556 (52%), Gaps = 75/556 (13%)
Query: 191 SSEVGSLPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNA 250
+S + ++ S S E L++ + + G+ R LE G T+R LL ++PR Y +
Sbjct: 107 TSTLINIESILSDELNLEQYLHALQGIGPRKIELLEKIGLETIRDLLFYYPRDYINYAR- 165
Query: 251 QIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKK 310
Q+ + + I GE ++ G C+F + + + + VV +G+ K
Sbjct: 166 QVTISN----IKEGETVTIIGRVKRCNFF-------TSSKNKKLSILELVVQDHTGEIK- 213
Query: 311 IYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDV-LK 369
L +FF G RFT+ + + + ++ + VSG V+ N Y + N+++ +
Sbjct: 214 ----LNRFFSGNRFTNKGWQEKQKRQYIRSTVIAVSGLVK----QNRYGLTLDNLEIEVL 265
Query: 370 DEDDLSLRAK--GRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLC 427
D+ + S+ + GR P+Y G++ +L+R I L++ DP+P + ++ L+
Sbjct: 266 DDFNSSIESWNIGRILPVYSLTEGIDNNLIRKIIISNLKSAKTILDPLPILLKSKYDLID 325
Query: 428 LFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKP 487
L DA + IH P +D + AR+RLIFDEFFYLQLG L K R+
Sbjct: 326 LKDALINIHFPTSLDFLERARRRLIFDEFFYLQLGFL------------------KRRQE 367
Query: 488 RLNAAYMEGWSS---LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCG 544
R + ++ LT + + LP+ LT SQ I+EII DL MNRLLQGDVG G
Sbjct: 368 RKVLKTINSFTPNRYLTHQFNKLLPFELTKSQRRVINEIIKDLDSLQSMNRLLQGDVGSG 427
Query: 545 KTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTP 604
KT+VA A + + SGYQ A M PTE+LA QHY ++ + + + LLTGST
Sbjct: 428 KTIVAIFAILTTLESGYQVALMAPTEVLAEQHYNKIVLYFNQL-----YLSVELLTGSTK 482
Query: 605 VKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYY 664
+ I + L TG++ L++GTH+LI E ++F L L I+DEQ RFGV QR R
Sbjct: 483 KSKRNEIYRQLLTGELPLLVGTHALIQEPIKFKKLGLVIIDEQHRFGVEQRTR------- 535
Query: 665 TSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIP 724
++N S PHVL+M+ATPIPRTLAL L+GD+ ++QI +LPPGR
Sbjct: 536 --------LLNKGKS--------PHVLSMTATPIPRTLALTLHGDLDISQIDELPPGRKA 579
Query: 725 IKTYIIEGN--EKGYE 738
I+T ++ GN +K YE
Sbjct: 580 IETKVLIGNQKQKAYE 595
>gi|443326510|ref|ZP_21055162.1| ATP-dependent DNA helicase RecG [Xenococcus sp. PCC 7305]
gi|442793899|gb|ELS03334.1| ATP-dependent DNA helicase RecG [Xenococcus sp. PCC 7305]
Length = 821
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 202/571 (35%), Positives = 293/571 (51%), Gaps = 81/571 (14%)
Query: 174 SEAWPSLYPALPNESSTSSEVGSLPSEASIEPL-LDKCISCVPGLSKRLYHQLENCGFYT 232
+ A P P ++E + P S +P+ L++ + V G+ + + LE G YT
Sbjct: 93 TNAAPPSKPKQTRAKHVAAETKTNPY--SSKPITLEQTLYTVVGIGGKGSY-LERLGLYT 149
Query: 233 LRKLLHHFPRTYADL-QNAQI-DLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIA 290
+R LL ++PR + D + QI +L+ G+ IG + S + +
Sbjct: 150 VRDLLFYYPREHLDYARQVQICNLEPGETATIIGTVKSCKCFNSP--------------K 195
Query: 291 DTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVR 350
+ + T V+ +G+ L L FF G RF + + +S + K+ VG V SG V+
Sbjct: 196 NKKLTIFQLVLRDPTGR-----LTLSNFFSGPRFANRGWQESYKRKYPVGAIVAASGLVK 250
Query: 351 AMRSNNHY--EMREYNIDVLKDEDDLSLRA--KGRPYPIYPSKGGLNASLLRDTIARALQ 406
N Y + + I+VL D S+ + GR P+Y G+ A +R +I L
Sbjct: 251 ----QNKYGLTLDKPEIEVL-DSAGASIESIKVGRILPVYSLSEGVPADTVRKSIIAILP 305
Query: 407 ALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLG--RL 464
DP+P I Q + L+ L DA IH P D AR+RL+FDEFFYLQLG R
Sbjct: 306 VAEQLKDPLPAAIRQGYDLIKLKDAISNIHFPTDQDILTHARRRLVFDEFFYLQLGFLRR 365
Query: 465 YQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEII 524
Q+L+ + + D L + G+ L LP+ LT++Q ++EI+
Sbjct: 366 RQLLK----KDQASATFD------LTGELINGFQEL-------LPFKLTNAQQRVVNEIL 408
Query: 525 WDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLL 584
DL+ PMNRL+QGDVG GKTVVA A + I SGYQAA M PTE+LA QHY L+
Sbjct: 409 GDLQSNTPMNRLVQGDVGAGKTVVAIFAILAAIQSGYQAALMAPTEVLAEQHYRKLVSWF 468
Query: 585 DNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIV 644
+ + H P + LLTGST K+ R I L+TG++ L++GTH+LI + V+FS L L ++
Sbjct: 469 NLL----HLP-VELLTGSTKTKKRREIHAQLETGELPLLVGTHALIQDPVQFSKLGLVVI 523
Query: 645 DEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLAL 704
DEQ RFGV QR R +K +PHVL M+ATPIPRTLAL
Sbjct: 524 DEQHRFGVQQRARLLAK-----------------------GESPHVLNMTATPIPRTLAL 560
Query: 705 ALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
L+GD+ ++Q+ +LPPGR I T + G ++
Sbjct: 561 TLHGDLDVSQVDELPPGRQAITTAVKTGRDR 591
>gi|440683315|ref|YP_007158110.1| ATP-dependent DNA helicase RecG [Anabaena cylindrica PCC 7122]
gi|428680434|gb|AFZ59200.1| ATP-dependent DNA helicase RecG [Anabaena cylindrica PCC 7122]
Length = 821
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 182/540 (33%), Positives = 286/540 (52%), Gaps = 75/540 (13%)
Query: 203 IEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIF 262
+ P +D+ +S +P + R L YT+R+LL ++PR + D Q+++ +
Sbjct: 120 LAPKIDQKLSELPEIGLRKAENLARLDLYTVRELLFYYPRDHIDYAR-QVNIQE------ 172
Query: 263 IGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNI----DSGQKKKIYLHLKKF 318
++ G + + + + C + ++ + ++GQ K + +F
Sbjct: 173 ---------LQGGETVTIIATVKRCNCFTSPKNKKLSILELILKDNTGQIK-----VGRF 218
Query: 319 FRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDD-LSLR 377
+ G RF+S + ++++ ++ VG + G V+A + + E ++VL + D +
Sbjct: 219 YAGARFSSRAWQETLKRRYAVGSVLAACGLVKAGKYGVTLDNPE--LEVLANPGDAIDSL 276
Query: 378 AKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQ 437
GR PIY G+ A+ +R + AL A DP+P + Q++GL+ L DA IH
Sbjct: 277 TIGRVVPIYALTEGVVANTVRQAVITALPATVNLKDPLPSGLRQKYGLMELKDAIANIHF 336
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPR--LNAAYME 495
P+ D +AR+RL+FDEFFYLQLG LL + +K + +A +
Sbjct: 337 PEDSDTLKIARRRLVFDEFFYLQLG-----------------LLQRQKKAKEIQTSAILA 379
Query: 496 GWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
L + + LP+ LT +Q I++I+ DL++ PMNRL+QGDVG GKTVVA +A +
Sbjct: 380 PKGQLLENFHKILPFQLTGAQQRVINDILNDLQKSTPMNRLVQGDVGSGKTVVAVVAIVA 439
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
I SGYQAA M PTE+LA QHY L+ + + H P + LLTGST + + R I L
Sbjct: 440 AIQSGYQAALMAPTEVLAEQHYRKLVSWFNLL----HLP-VELLTGSTKIAKRREIHSQL 494
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
+TG++ L++GTH+LI +KV F L L ++DEQ RFGV QR + K
Sbjct: 495 ETGELPLLVGTHALIQDKVNFQRLGLVVIDEQHRFGVEQRAKLQQK-------------- 540
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
PHVL M+ATPIPRTLAL ++GD+ ++QI +LPPGR IKT ++ G ++
Sbjct: 541 ---------GEQPHVLTMTATPIPRTLALTVHGDLDVSQIDELPPGRQQIKTTMLSGQQR 591
>gi|86610232|ref|YP_478994.1| ATP-dependent DNA helicase RecG [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558774|gb|ABD03731.1| ATP-dependent DNA helicase RecG [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 837
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 188/555 (33%), Positives = 276/555 (49%), Gaps = 73/555 (13%)
Query: 185 PNESSTSSEVGSLPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTY 244
P E+ S+ SLP+ S+E + + + G+ + +L G +++R L++FPR Y
Sbjct: 122 PPEAGRSTISPSLPAGLSLE----QPLQFLKGIGPKSAEKLAQLGLHSVRDALYYFPRDY 177
Query: 245 ADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNID 304
D + R K G + + + + C + + N+
Sbjct: 178 LDYSRR----------------VLIRQAKVGETVTLVGTVKSCSCFTSPKNPSLTIFNLK 221
Query: 305 SGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYN 364
K + + L +F+ G +F + S+E ++ G V SG V+ R +
Sbjct: 222 IADKSGV-ITLSRFYSGRQFAQRSWQASLERQYPKGALVAASGLVKKGRLG--LTLDNPQ 278
Query: 365 IDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFG 424
++VL E + L G+ P+YP G+ A L+R + AL A DP+P ++ ++
Sbjct: 279 LEVLGGEGE-ELDRLGKILPVYPLSEGIPADLVRKAVQLALPAAALVEDPLPADLKRQLQ 337
Query: 425 LLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKY 484
LL L A IH P+ + AR+RL+FDEFFYLQL LL +
Sbjct: 338 LLDLPVALQQIHFPETRELLAQARRRLVFDEFFYLQLS-----------------LLQRR 380
Query: 485 RKPRLNAA----YMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGD 540
+ R A Y L + + LP+ LT++Q AI EI+ DL+ P+PMNRLLQGD
Sbjct: 381 HRYRAQAQAIPRYQPARGELLDRFYQILPFQLTAAQQRAIDEILADLRDPLPMNRLLQGD 440
Query: 541 VGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLT 600
VG GKTVVA A + I SG+QAA M PTE+LA QHY L++ L ++ + LLT
Sbjct: 441 VGSGKTVVAVAAVLAAIQSGWQAALMAPTEVLAEQHYRKLVEWLSQLQV-----PVELLT 495
Query: 601 GSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNS 660
GSTP + R I + LQTG++ LV+GTH+LI V+F L L ++DEQ RFGV QR
Sbjct: 496 GSTPPAKRREILRQLQTGELPLVVGTHALIQPAVQFRNLGLVVIDEQHRFGVEQRAALQQ 555
Query: 661 KLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPP 720
K + P VL M+ATPIPRTL LAL+GD+ +TQI +LPP
Sbjct: 556 KGDH-----------------------PDVLTMTATPIPRTLTLALHGDLDVTQIDELPP 592
Query: 721 GRIPIKTYIIEGNEK 735
GR P+ T + ++
Sbjct: 593 GRKPVHTLVARPGDR 607
>gi|428211626|ref|YP_007084770.1| ATP-dependent DNA helicase RecG [Oscillatoria acuminata PCC 6304]
gi|428000007|gb|AFY80850.1| ATP-dependent DNA helicase RecG [Oscillatoria acuminata PCC 6304]
Length = 840
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 189/557 (33%), Positives = 294/557 (52%), Gaps = 73/557 (13%)
Query: 185 PNESSTSSEVGSLPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTY 244
P E ++S+ + S AS+ L++ +S V G+ R +L G YT+ LL++FPR +
Sbjct: 124 PREPLSTSQSNTNRSTASVS--LNQALSQVSGIGSRNADKLAKLGLYTIYDLLYNFPRDH 181
Query: 245 ADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNI- 303
D Q+++ + ++AG + + + + C+ + ++N+
Sbjct: 182 VDYAR-QVNIKE---------------LEAGETVTIIGTVKRCDCFSSPRNKKLTILNLV 225
Query: 304 ---DSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEM 360
++GQ K L +FF G R ++ + + + + G V SG V+ S +
Sbjct: 226 IKDNTGQIK-----LCRFFAG-RQSNRGWQEIQKRMYPTGAVVAASGLVKT--SKYGVSL 277
Query: 361 REYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEIT 420
I+VL + + + GR PIY G+ A ++R + + + DP+P +
Sbjct: 278 DNPQIEVLDESGTIESLSVGRVVPIYALTEGVTADIVRKAVKSVIPHVKLLGDPLPDSLR 337
Query: 421 QEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGL 480
+ L+ L +A IH P D + AR+RL+FDEFFYLQLG L++ ++GL
Sbjct: 338 SRYQLMGLQEAVSQIHFPGDRDILEEARRRLVFDEFFYLQLGLLHR----------RQGL 387
Query: 481 LDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGD 540
+ A + G L K + LP+ LT++Q I+EI+ DL++P PMNRL+QGD
Sbjct: 388 RETQ-----TGAVLSGKGKLINKFYKLLPFKLTNAQQRVIAEILEDLQKPKPMNRLVQGD 442
Query: 541 VGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLT 600
VG GKTVVA +A + I +GYQAAFM PTE+LA QHY+ L+ + + H P + LLT
Sbjct: 443 VGAGKTVVAVVAILAAIQAGYQAAFMAPTEVLAEQHYKKLVNWFNLL----HLP-VELLT 497
Query: 601 GSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNS 660
GST + + I L+TG++ +++GTH+LI + V F L L ++DEQ RFGV QR +
Sbjct: 498 GSTKTAKRKQILPQLETGELPVLVGTHALIQDPVNFHKLGLIVIDEQHRFGVGQRAKLQQ 557
Query: 661 KLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPP 720
K +D PHVL M+ATPIPRTLAL L+GD+ ++QI +LPP
Sbjct: 558 K-------------------GED----PHVLTMTATPIPRTLALTLHGDLDVSQIDELPP 594
Query: 721 GRIPIKTYIIEGNEKGY 737
GR I+T I G E+ +
Sbjct: 595 GRQAIQTTIFSGKERTH 611
>gi|428772556|ref|YP_007164344.1| ATP-dependent DNA helicase RecG [Cyanobacterium stanieri PCC 7202]
gi|428686835|gb|AFZ46695.1| ATP-dependent DNA helicase RecG [Cyanobacterium stanieri PCC 7202]
Length = 832
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 184/530 (34%), Positives = 274/530 (51%), Gaps = 74/530 (13%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
+ CV +L LE G Y +R +L ++PR + D N +I + D + +GE ++
Sbjct: 142 LKCVNNRQNKL---LEKLGIYRVRDVLFYYPREHIDYGN-KIAIKD----LEVGETVTVI 193
Query: 271 GMKAGCS-FSFLE----VIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFT 325
G CS FS + I+ I D +GD L + +FF G F+
Sbjct: 194 GKVKKCSCFSSPKNKKLTILSLVIRDK---TGD--------------LKISRFFAGNYFS 236
Query: 326 SIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPI 385
S + + ++ + +G + SG V+ + + E+ + + D+++ GR P+
Sbjct: 237 SRGWQEKMKRSYPMGALIAASGLVKGNKYGITLDNPEFEV-LDSAGDNINSLKIGRLLPV 295
Query: 386 YPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
Y G+ A L+R + L L DP+P + +++ L+ L A IH P + +
Sbjct: 296 YSLTEGVAADLIRKAVVECLPTLSEIDDPLPVNLKRQYSLVELQRAIAHIHYPDNQKQLT 355
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLL 505
AR+RLIFDEFFYLQLG L + K K A+ L ++
Sbjct: 356 DARRRLIFDEFFYLQLGFLER---------------KKQDKQNRQASPFIPQGKLIEEFN 400
Query: 506 RALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAF 565
+ LP+ LT +Q I+EI DL+ PMNRL+QGDVG GKT+VA A + + SGYQAA
Sbjct: 401 KLLPFQLTDAQQRVINEIEADLESSSPMNRLVQGDVGSGKTIVAVFAILAALQSGYQAAL 460
Query: 566 MVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIG 625
M PTE+LA QHY +++ + + H P + LLTGST + R I LQ+G++ L+IG
Sbjct: 461 MAPTEVLAEQHYRKIVQWFNLL----HLP-VELLTGSTKTAKRREIHSQLQSGELPLLIG 515
Query: 626 THSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQH 685
TH+LI + V+F L L ++DEQ RFGV QR R +K
Sbjct: 516 THALIQDPVKFRNLGLVVIDEQHRFGVQQRARLLAK-----------------------G 552
Query: 686 MAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
APHVL M+ATPIPRTLAL L+GD+ ++QI +LPPGR PI+T ++ G ++
Sbjct: 553 KAPHVLTMTATPIPRTLALTLHGDLDVSQIDELPPGRQPIQTTVLAGKQR 602
>gi|411117373|ref|ZP_11389860.1| ATP-dependent DNA helicase RecG [Oscillatoriales cyanobacterium
JSC-12]
gi|410713476|gb|EKQ70977.1| ATP-dependent DNA helicase RecG [Oscillatoriales cyanobacterium
JSC-12]
Length = 832
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 279/534 (52%), Gaps = 71/534 (13%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
LD+ ++ +PG+ + +L T+R LL+++PR + D
Sbjct: 136 LDQPLTYLPGVGPKNAEKLAKLRLQTVRDLLYYYPRDHIDY----------------ARQ 179
Query: 267 ISSRGMKAGCSFSFLEVIVGCEI----ADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGT 322
++ R M+ G + + + + C +++ T + VV ++GQ + L +F+ G+
Sbjct: 180 VNIRQMQEGEAVTLVAFVKRCNCFTSPKNSKLTILELVVRDNTGQ-----IRLSRFYAGS 234
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDE-DDLSLRAKGR 381
RF + + + + + G + SG V+ RS + + I+VL D++ GR
Sbjct: 235 RFNNRGWQEQQKRLYPPGAAIAASGLVK--RSKYGMTLEDPEIEVLSHSGDEIDSLKVGR 292
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
PIY G+ A L+R T+ AL A+ + +P E+ ++ L+ + DA IH P
Sbjct: 293 LVPIYRLTEGVEADLVRRTVVAALPAVQQIQEALPDEMRHQYNLVGIQDAIAHIHFPPDA 352
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
AR RL+FDEFFYLQLG L ++ +L + + A + L
Sbjct: 353 QALTAARHRLVFDEFFYLQLGLL-----------KRRKILQQNQA----GAILAPTGQLI 397
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
LP+ LTS+Q I++I+ DL++P PMNRL+QGDVG GKTVVA +A + I +GY
Sbjct: 398 DNFYNILPFKLTSAQQRVINDILNDLQKPAPMNRLVQGDVGSGKTVVAVVAMLAAIQAGY 457
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
QAA M PTE+LA QHY L+ + + H P + LLTGST + R I LQTG+++
Sbjct: 458 QAAMMAPTEVLAEQHYRKLVSWFNLL----HLP-VELLTGSTKAAKRREIHSQLQTGELS 512
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+++GTH+LI V F L L ++DEQ RFGV QR + K +
Sbjct: 513 VLVGTHALIQNPVNFHRLGLVVIDEQHRFGVEQRAKLQQKGAH----------------- 555
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
PHVL M+ATPIPRTLAL L+GD+ ++QI +LPPGR PI+T ++ G ++
Sbjct: 556 ------PHVLTMTATPIPRTLALTLHGDLDVSQIDELPPGRKPIQTTVLAGRDR 603
>gi|158338329|ref|YP_001519506.1| ATP-dependent DNA helicase RecG [Acaryochloris marina MBIC11017]
gi|158308570|gb|ABW30187.1| ATP-dependent DNA helicase RecG [Acaryochloris marina MBIC11017]
Length = 818
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 183/536 (34%), Positives = 273/536 (50%), Gaps = 71/536 (13%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
LD I + G+ + +LE G +++R LL ++PR + D
Sbjct: 121 LDLPILSLSGIGPKSAQKLEKLGLFSVRDLLFYYPRDHID----------------YARQ 164
Query: 267 ISSRGMKAGCSFSFLEVI--VGC--EIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGT 322
+S R ++ G + + + + V C + + T + VV +GQ L L +F+ G
Sbjct: 165 VSIRDLEEGATVTLVATVRRVNCFSSPRNPKLTIFELVVKDATGQ-----LKLSRFYAGN 219
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDE-DDLSLRAKGR 381
RF S + + + + G V SG V++ S + +++VL D + GR
Sbjct: 220 RFRSRGWQEQQKRLYPPGAVVAASGLVKS--SKYGITLDNPDLEVLNHSGDKIESMVIGR 277
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
PIY G+ L+R + AL A + DP+P+ + Q+ L L A +H P
Sbjct: 278 VVPIYALTEGVTPDLVRRAVVAALPAAKSLRDPLPEGLRQQNNLTDLPSAIADVHFPPDS 337
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
D D AR RLIFDEFFYLQLG L + + ++ + + L
Sbjct: 338 DALDRARHRLIFDEFFYLQLGML---------------VRRQQQRQTQESVPLSVHGELL 382
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
++ LP++LT +Q + +I+ DL+ PMNRL+QGDVG GKTVVA +A + I SGY
Sbjct: 383 ERFYEVLPFTLTGAQKRVVQDILADLQSTQPMNRLVQGDVGSGKTVVAVIALLSAIQSGY 442
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q A M PTE+LA QHY L++ + + H P + LLTGST + R I + L+TG++
Sbjct: 443 QTALMAPTEVLAEQHYHKLVEWFNQL----HLP-VDLLTGSTKAAKRRQIAEQLKTGELP 497
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
L++GTH+LI + VEF L LA++DEQ RFGV QR K
Sbjct: 498 LLVGTHALIQDNVEFDRLGLAVIDEQHRFGVQQRALLQQK-------------------- 537
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGY 737
QH PHVL M+ATPIPRTLAL L+GD+ ++QI +LPPGR I+T ++ ++ +
Sbjct: 538 -GQH--PHVLTMTATPIPRTLALTLHGDLDVSQIDELPPGRQAIQTTMLTTRDRAH 590
>gi|186685619|ref|YP_001868815.1| ATP-dependent DNA helicase RecG [Nostoc punctiforme PCC 73102]
gi|186468071|gb|ACC83872.1| ATP-dependent DNA helicase RecG [Nostoc punctiforme PCC 73102]
Length = 831
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 185/540 (34%), Positives = 280/540 (51%), Gaps = 71/540 (13%)
Query: 203 IEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIF 262
+ P +D+ +S +P + + L G +T+R LL ++PR + D
Sbjct: 130 LAPKIDQKLSDLPEIGFKKADNLARLGLHTVRDLLFYYPRDHIDYARQ------------ 177
Query: 263 IGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSG----DEVVNIDSGQKKKIYLHLKKF 318
++ R ++AG + + + + C + + VV +SGQ K + +F
Sbjct: 178 ----VNIRELQAGETVTIVATVKRCNCFSSPKNQKLSILELVVKDNSGQIK-----IGRF 228
Query: 319 FRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDE-DDLSLR 377
+ GTRF+S + +S++ ++ VG + G V+ S + ++VL + D +
Sbjct: 229 YAGTRFSSRAWQESLKRRYPVGSILAACGLVK--ESKYGLTLDNPELEVLANPGDSIESL 286
Query: 378 AKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQ 437
GR PIY G+ A+ +R + AL A DP+P + Q++GL+ L DA IH
Sbjct: 287 NIGRVVPIYGLTEGVVANTVRQAVIAALPAAANLKDPLPSGLRQKYGLMELKDAIANIHF 346
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGW 497
P +AR+RL+FDEFFYLQLG L + + + +A +
Sbjct: 347 PSDSAALQVARRRLVFDEFFYLQLGLLQRQ---------------QQARAIQTSAILVPR 391
Query: 498 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
L +K LP+ LT +Q +++I+ DL++PVPMNRL+QGDVG GKTVVA LA + I
Sbjct: 392 GQLVEKFHEILPFKLTGAQQRVLNDILNDLQKPVPMNRLVQGDVGSGKTVVAVLAILAAI 451
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
SGYQAA M PTE+LA QHY L+ + + H P + LLTGST + R I L T
Sbjct: 452 QSGYQAALMAPTEVLAEQHYRKLVSWFNLL----HLP-VELLTGSTKTAKRRQIHSQLGT 506
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
G++ L++GTH+LI + V F L L ++DEQ RFGV QR R K
Sbjct: 507 GELPLLVGTHALIQDSVNFQQLGLVVIDEQHRFGVEQRARLQQK---------------- 550
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGY 737
PHVL M+ATPIPRTLAL ++GD+ ++QI +LPPGR I+T ++ G ++ +
Sbjct: 551 -------GEQPHVLTMTATPIPRTLALTIHGDLDVSQIDELPPGRQKIQTTVLSGQQRNH 603
>gi|282898565|ref|ZP_06306553.1| ATP-dependent DNA helicase RecG [Cylindrospermopsis raciborskii
CS-505]
gi|281196433|gb|EFA71342.1| ATP-dependent DNA helicase RecG [Cylindrospermopsis raciborskii
CS-505]
Length = 827
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 183/559 (32%), Positives = 283/559 (50%), Gaps = 75/559 (13%)
Query: 186 NESSTSSEVGSLPSEASIE----PLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFP 241
N+ +T+ V + P + P +D+ + +P + + L T+R LL ++P
Sbjct: 105 NQPTTTRLVKTTPIVNEVNQKPAPKIDQKLRDLPEIGIKRAENLYRLELLTVRDLLFYYP 164
Query: 242 RTYADL--QNAQIDLDDGQYFIFIGEIISSRGMKA--GCSFSFLEVIVGCEIADTETTSG 297
R Y D Q +L G+ IGE+ + S LE+++ +
Sbjct: 165 RDYIDYARQVNIRELKGGETVTIIGEVRRCNCFTSPKNQKLSILELMLKDQ--------- 215
Query: 298 DEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNH 357
+GQ K + +F+ G+RF+S + + ++ ++ G V G V+ R
Sbjct: 216 -------TGQVK-----VSRFYAGSRFSSKGWQEGLKRRYTPGTLVAACGLVKPSRYGLT 263
Query: 358 YEMREYNIDVLKDEDD-LSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVP 416
+ E I+VL + D + GR PIY G+ A+ +R + L + + DP+P
Sbjct: 264 LDNPE--IEVLANSGDAIDSFTIGRVVPIYSLTEGVVANTVRQAVMAVLPSAKSLQDPLP 321
Query: 417 KEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFE 476
+ +++ L+ L A IH P+ D +AR+RL+FDEFFYLQ+G L + + Q
Sbjct: 322 PGLRKKYNLIELKQAIPNIHFPQDSDTLKMARRRLVFDEFFYLQVGLLQRQKQAKANQ-- 379
Query: 477 KEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRL 536
A + L + LP+ T++Q I++I+ DL++P PMNRL
Sbjct: 380 -------------TGAILAPSGKLLDQFHEILPFKFTNAQQRVINDILNDLQKPTPMNRL 426
Query: 537 LQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKI 596
+QGDVG GKTVVA +A + I SGYQAA M PTE+LA QHY L+ + + H P +
Sbjct: 427 VQGDVGSGKTVVAVVAILTAIQSGYQAALMAPTEVLAEQHYRKLVTWFNLL----HLP-V 481
Query: 597 ALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRG 656
LLTGST + R I L+TG++ L++GTH+LI +KV+F L L ++DEQ RFGV QR
Sbjct: 482 ELLTGSTKTSKRREIHSQLETGELPLLVGTHALIQDKVKFHRLGLVVIDEQHRFGVEQRA 541
Query: 657 RFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQIT 716
+ K PHVL M+ATPIPRTLAL ++GD+ ++QI
Sbjct: 542 KLQQK-----------------------GEQPHVLTMTATPIPRTLALTVHGDLDVSQID 578
Query: 717 DLPPGRIPIKTYIIEGNEK 735
+LPPGR IKT ++ +++
Sbjct: 579 ELPPGRQQIKTSLLTSHQR 597
>gi|159903548|ref|YP_001550892.1| ATP-dependent DNA helicase RecG [Prochlorococcus marinus str. MIT
9211]
gi|159888724|gb|ABX08938.1| ATP-dependent DNA helicase recG [Prochlorococcus marinus str. MIT
9211]
Length = 815
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 182/538 (33%), Positives = 271/538 (50%), Gaps = 71/538 (13%)
Query: 205 PLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIF 262
P LD +S V G+ + L + G +T+R LL H+PR Y D + L+ G+
Sbjct: 114 PSLDSTLSTVKGIGSKTIELLASLGIFTIRDLLVHYPRDYVDYSQLKRISSLEAGETATI 173
Query: 263 IGEIISSRGMKA--GCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFR 320
+ I + + + S LE+++ Q + L KFF
Sbjct: 174 VASIRRTNYFTSPRNPNLSVLELLI---------------------QDSTGRIKLTKFFA 212
Query: 321 GTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAK- 379
G RF++ +L ++ G V VSG V+ + + I+VL+++ S+++K
Sbjct: 213 GRRFSNRGYLMKQVSQYPTGSTVAVSGLVKEGSYGKCFI--DPIIEVLENQGT-SIKSKS 269
Query: 380 -GRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQP 438
GR PIYP GL A +R L DP+P+E L+ + +A IHQP
Sbjct: 270 IGRLIPIYPLTEGLTAVRIRRVFDLVLPFAAFWKDPLPQERISHHSLMSIQNAMNQIHQP 329
Query: 439 KHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWS 498
+++ + AR+R++FDEF LQL L K L K P+L + +
Sbjct: 330 NNLESLNAARRRIVFDEFLCLQLALL-----------RKRNLFRKKPAPQLKK--VNQIN 376
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
SLT + LP+S T+ Q + EI DL+ PM RLLQGDVG GKTVVA A + +
Sbjct: 377 SLTSQFYSLLPFSFTNEQKRVLHEIESDLESSEPMARLLQGDVGSGKTVVAIAALLYAVD 436
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
SG+Q A M PTE+LA QHY++L K L + + L+TGSTP + + I DL TG
Sbjct: 437 SGWQGALMAPTEVLAQQHYKNLCKWLPQLH-----VTVDLITGSTPNSRRKQILDDLSTG 491
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+ +++GTH+LI + V FS L L +VDEQ RFGV QR K
Sbjct: 492 GVNIIVGTHALIEDSVSFSRLGLVVVDEQHRFGVYQRDLLLRK----------------- 534
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKG 736
+ PH+L M+ATPIPRTLAL+++GD+ ++QI ++PPGR IKT +++ +++
Sbjct: 535 ------GLQPHLLTMTATPIPRTLALSIHGDLDVSQINEMPPGREKIKTSMLQFSQRN 586
>gi|407961209|dbj|BAM54449.1| ATP-dependent DNA helicase RecG [Bacillus subtilis BEST7613]
Length = 809
Score = 275 bits (702), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 186/541 (34%), Positives = 272/541 (50%), Gaps = 69/541 (12%)
Query: 198 PSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDG 257
P IE L ++ V S+ L+N G T+ LL +FPR Y D
Sbjct: 105 PKSGQIE--LHTPLATVVSQSQHQTKLLKNLGLATVEDLLFYFPRDYLDYAQQ------- 155
Query: 258 QYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNID-SGQKKKIYLHLK 316
+ I E + AG + + + +V C + ++ I Q +I L
Sbjct: 156 ---VTIAE------LTAGETVTIVGRVVNCTCFTSPKNQNLNILQIQLRDQTGRI--KLS 204
Query: 317 KFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVL-KDEDDLS 375
+F+ G RF + + I+ + V SG V++ S + I+VL + +
Sbjct: 205 RFYAGKRFAHRGWQEKIKKLYPPQAVVAASGLVKS--SKFGLTLDNPEIEVLDRHSPSID 262
Query: 376 LRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGI 435
GR P+YP G+ A LR + A+ DP+P+EI +++ L+ L A I
Sbjct: 263 SFKVGRVLPVYPLTEGITADFLRKLVLACQTAIAKLSDPLPQEIREKYELIDLQTAIAQI 322
Query: 436 HQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKY-RKPRLNAAYM 494
H P++ ++ LAR+RL+FDEFFYLQLG L + +Y +K + +A
Sbjct: 323 HFPENTEKLSLARRRLVFDEFFYLQLGFLQR----------------RYGQKQQQQSAIF 366
Query: 495 EGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACM 554
L +K LP+ LT +Q ++EI+ DL +P PMNRL+QGDVG GKTVV A +
Sbjct: 367 TPHGELLEKFSDLLPFRLTQAQQRVVNEILQDLNKPSPMNRLVQGDVGSGKTVVGVFAIL 426
Query: 555 EVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKD 614
+ GYQAA M PTE+LA QH + L+ + + + P + LLTGST + R I
Sbjct: 427 AALQGGYQAALMAPTEVLAEQHCQKLVSWFNLL----YLP-VELLTGSTKTAKRREIHAQ 481
Query: 615 LQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMV 674
L TG + L++GTH+LI E V F L L ++ EQ RFGV QR + +K
Sbjct: 482 LSTGQLPLLVGTHALIQETVNFQRLGLVVIGEQHRFGVQQRAKLLAK------------- 528
Query: 675 NSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
G+ APHVL+M+ATPIPRTLAL L+GD+ ++QI +LPPGR PI+T +I E
Sbjct: 529 ---GN-------APHVLSMTATPIPRTLALTLHGDLEVSQIDELPPGRQPIRTSVITAKE 578
Query: 735 K 735
+
Sbjct: 579 R 579
>gi|434400210|ref|YP_007134214.1| ATP-dependent DNA helicase RecG [Stanieria cyanosphaera PCC 7437]
gi|428271307|gb|AFZ37248.1| ATP-dependent DNA helicase RecG [Stanieria cyanosphaera PCC 7437]
Length = 819
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 187/559 (33%), Positives = 278/559 (49%), Gaps = 73/559 (13%)
Query: 182 PALPNESS--TSSEVGSLPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHH 239
P LP + +S+ S S+E L + I G + R LE G T+R LL +
Sbjct: 99 PKLPRTKTLVSSTTKSYARSATSLEQPLSQVIEI--GRNSRY---LERLGLATVRDLLFY 153
Query: 240 FPRTYADL--QNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSG 297
+PR + D Q L G+ IG + S + + + T
Sbjct: 154 YPRNHLDYARQVTIAHLVPGETVTIIGTVKSCKCFTSP--------------KKKQLTIF 199
Query: 298 DEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNH 357
+ V+ +G+ + L F G R++S + + + ++ +G V SG V+ +
Sbjct: 200 ELVIQDLTGK-----IRLNHFLTGNRYSSRAWQERYKRQYPIGSVVAASGLVKQQKYG-- 252
Query: 358 YEMREYNIDVLKDEDDLSLRAK-GRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVP 416
+ + + I+VL D K GR P+Y G+ A +R + L DP+P
Sbjct: 253 FTLEKPEIEVLDSHGDSIESIKIGRILPVYALTEGVPADSVRKAVIATLPVAKQIKDPLP 312
Query: 417 KEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFE 476
I +++GL+ L DA IH P H + AR+RL+FDEFFYLQLG L +
Sbjct: 313 ATIRKQYGLIKLRDAIANIHFPDHQEILAHARRRLVFDEFFYLQLGFLERR--------- 363
Query: 477 KEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRL 536
++++ + +A + + + LP+ LT++Q I+EI+ DL PMNRL
Sbjct: 364 -----QQFKQTQTSATFNPQGEIIQRFSAEILPFQLTNAQKRVINEILQDLSSSTPMNRL 418
Query: 537 LQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKI 596
+QGDVG GKT+VA A + I SGYQAA M PTE+LA QHY L+ + + H P +
Sbjct: 419 VQGDVGSGKTIVAVFAVLAAIQSGYQAALMAPTEVLAEQHYRKLVSWFNLL----HLP-V 473
Query: 597 ALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRG 656
LLTGST + R I L+TG++ L++GTH+LI + V F L L ++DEQ RFGV QR
Sbjct: 474 ELLTGSTKTAKRREIHSQLETGELPLLVGTHALIQDPVNFYKLGLVVIDEQHRFGVQQRA 533
Query: 657 RFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQIT 716
R +K +PHVL M+ATPIPRTLAL L+GD+ ++QI
Sbjct: 534 RLLAK-----------------------GQSPHVLTMTATPIPRTLALTLHGDLDVSQID 570
Query: 717 DLPPGRIPIKTYIIEGNEK 735
+LPPGR I+T + G ++
Sbjct: 571 ELPPGRQAIQTKALTGKQR 589
>gi|428775135|ref|YP_007166922.1| ATP-dependent DNA helicase RecG [Halothece sp. PCC 7418]
gi|428689414|gb|AFZ42708.1| ATP-dependent DNA helicase RecG [Halothece sp. PCC 7418]
Length = 815
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 185/541 (34%), Positives = 274/541 (50%), Gaps = 79/541 (14%)
Query: 203 IEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADL-QNAQI-DLDDGQYF 260
+EP ++ ++ PG+ + L G T+R +L ++PR + D Q I DL +G+
Sbjct: 116 LEP--EQPLTEAPGIGRNHTKSLYRLGLETVRDVLFYYPREHIDYAQQVNIGDLVEGETV 173
Query: 261 IFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFR 320
+G + S + + I I D +G+ K L +FF
Sbjct: 174 TIVGTVKSCNCFTSPKNKKL--SIFQLTIKDR------------TGEVK-----LSRFFA 214
Query: 321 GTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDV-LKDE-----DDL 374
G RFT+ + + + + V SG V+ N Y + N ++ L D D +
Sbjct: 215 GNRFTNRGWQEKQKKLYPRSAIVAASGLVK----KNKYGITLDNPEIELLDSPGGEIDSI 270
Query: 375 SLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMG 434
++ GR P+YP G++A ++R + L A DP+P + Q++G L L +A
Sbjct: 271 NI---GRVLPVYPLTEGVSADVIRKAVMTVLPAAEKLKDPLPSHLRQQYGFLSLPEAVSN 327
Query: 435 IHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYM 494
+H P D AR+RLIFDEFF+LQLG L + + TQ + +
Sbjct: 328 LHFPPDHDTLAHARRRLIFDEFFFLQLGFLSRRQQQKETQ---------------QSVIL 372
Query: 495 EGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACM 554
L + LP+ LT++Q +S+I+ DL PMNRL+QGDVG GKTVVA A +
Sbjct: 373 NPTGKLIDQFKEVLPFQLTTAQQRVVSDILQDLNSETPMNRLVQGDVGSGKTVVAVFAIL 432
Query: 555 EVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKD 614
I SGYQAA M PTE+LA QHY L+ + + H P + LLTGST + R I +
Sbjct: 433 AAIQSGYQAALMAPTEVLAEQHYRKLVGWFNLL----HLP-VELLTGSTKTAKRREIHQQ 487
Query: 615 LQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMV 674
L TG++ L++GTH+LI + V F L L ++DEQ RFGV QR R +K +
Sbjct: 488 LATGELPLLVGTHALIQDPVNFQRLGLVVIDEQHRFGVQQRSRLLNKGH----------- 536
Query: 675 NSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
+PHVL+M+ATPIPRTLAL L+GD+ ++QI +LPPGR I+T + G +
Sbjct: 537 ------------SPHVLSMTATPIPRTLALTLHGDLDVSQIDELPPGRQDIQTTALSGKD 584
Query: 735 K 735
+
Sbjct: 585 R 585
>gi|427719858|ref|YP_007067852.1| ATP-dependent DNA helicase RecG [Calothrix sp. PCC 7507]
gi|427352294|gb|AFY35018.1| ATP-dependent DNA helicase RecG [Calothrix sp. PCC 7507]
Length = 826
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 185/538 (34%), Positives = 280/538 (52%), Gaps = 71/538 (13%)
Query: 203 IEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIF 262
+ P +D+ +S +P + R L G T+R LL ++PR + D
Sbjct: 125 LAPKIDQKLSDLPEIGIRKADSLARLGLSTVRDLLFYYPRDHIDY--------------- 169
Query: 263 IGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNI----DSGQKKKIYLHLKKF 318
G ++ ++AG + + + + C ++ ++ + ++GQ K + +F
Sbjct: 170 -GRQVNISELEAGETVTIVATVKRCNCFNSPKNQKLSILELILKDNTGQIK-----ISRF 223
Query: 319 FRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDD-LSLR 377
GTRFTS + +S++ ++ VG + G V+A S + ++VL + D +
Sbjct: 224 SAGTRFTSRAWQESLKRRYPVGSMIAACGLVKA--SKYGLTLDNPELEVLANPGDPIDSL 281
Query: 378 AKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQ 437
GR PIY G+ A+ +R I L A DP+P + +++GL+ L DA IH
Sbjct: 282 TIGRVVPIYGLTEGVVANTVRQAIIATLPAAAHLKDPLPSGLREKYGLMELKDAIANIHF 341
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGW 497
P +AR+RL+FDEFFYLQL L + + Q +A +
Sbjct: 342 PSDSATLQVARRRLVFDEFFYLQLSLLQRQQQAKAIQ---------------TSAILAPK 386
Query: 498 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
L +K LP+ LT +Q I++I+ DL++P PMNRL+QGDVG GKTVVA +A + I
Sbjct: 387 GQLIEKFHEILPFKLTGAQQRVINDILSDLQKPAPMNRLVQGDVGSGKTVVAVVAILAAI 446
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
SGYQAA M PTE+LA QHY L+ + + H P + LLTGST + R+I L+T
Sbjct: 447 QSGYQAALMAPTEVLAEQHYRKLVSWFNLL----HLP-VELLTGSTKTAKRRLIHSQLET 501
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
G++ L++GTH+LI + V F L LA++DEQ RFGV QR R K
Sbjct: 502 GELPLLVGTHALIQDPVNFRQLGLAVIDEQHRFGVEQRARLQQK---------------- 545
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
PHVL M+ATPIPRTLAL ++GDM+++QI +LPPGR I+T ++ G ++
Sbjct: 546 -------GEQPHVLTMTATPIPRTLALTIHGDMNVSQIDELPPGRQKIQTTMLSGQQR 596
>gi|300867528|ref|ZP_07112179.1| ATP-dependent DNA helicase recG [Oscillatoria sp. PCC 6506]
gi|300334522|emb|CBN57349.1| ATP-dependent DNA helicase recG [Oscillatoria sp. PCC 6506]
Length = 832
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 191/569 (33%), Positives = 292/569 (51%), Gaps = 75/569 (13%)
Query: 173 LSEAWPSLYPALPNESSTSSEVGSLPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYT 232
+ E P P+ P ++ ++ + P S+ LD+ ++ V G+ ++L G T
Sbjct: 103 VREQTPEYTPSSPVPNTRTAPLSQNPPPPSLS--LDQPLNRVTGIGPNNGNRLGKLGLLT 160
Query: 233 LRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEI--- 289
+ LL+++PR + D +S R + AG + + + + C
Sbjct: 161 VYDLLYYYPRDHIDYARQ----------------VSIRELAAGETVTLVATVKRCNCFSS 204
Query: 290 -ADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGK 348
+ + T + ++ +GQ K L +FF G R+++ + + + + VG V SG
Sbjct: 205 PKNNKLTILELILTDRTGQIK-----LNRFFHGNRYSNRGWQEQQKRYYPVGAVVAASGL 259
Query: 349 VRAMRSNNHYEMREYNIDVLKDEDDLSLRAK--GRPYPIYPSKGGLNASLLRDTIARALQ 406
V+ + E E I+VL D D ++ + GR P+YP G++A ++R +A AL
Sbjct: 260 VKQGKYGVTLENPE--IEVL-DSDGGTIESATVGRLVPVYPLTDGVDAGVVRRGMAAALP 316
Query: 407 ALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQ 466
A+ + +P+ + + L+ + DA IH P D +R+RL+FDEFFYLQLG L +
Sbjct: 317 AVKQVQESLPESLRDRYSLMGIADALSNIHFPLDRDCLSASRRRLVFDEFFYLQLGLLKR 376
Query: 467 MLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWD 526
+RK + +A + L +P+ LT++Q I+EI+ D
Sbjct: 377 R--------------QMHRKAQASAVLIPN-GELLNNFYNIIPFKLTNAQQRVINEILND 421
Query: 527 LKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDN 586
L P PMNRL+QGDVG GKTVVA +A + I SGYQAA M PTE+LA QHY L+ L+
Sbjct: 422 LASPEPMNRLVQGDVGAGKTVVAVVAILAAIQSGYQAALMAPTEVLAEQHYRKLVGWLNL 481
Query: 587 MEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDE 646
M H P + LLTGST V + R I L+TG + +++GTH+LI + V F L L ++DE
Sbjct: 482 M----HLP-VELLTGSTKVAKRREIHSQLETGQLKVLVGTHALIQDTVNFDKLGLVVIDE 536
Query: 647 QQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALAL 706
Q RFGV QR + K +PHVL M+ATPIPRTLAL L
Sbjct: 537 QHRFGVQQRAKLQQK-----------------------GESPHVLTMTATPIPRTLALTL 573
Query: 707 YGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
+GD+ ++ I +LPPGR I+T I+ G E+
Sbjct: 574 HGDLDVSLIDELPPGRQAIQTTILTGKER 602
>gi|428313659|ref|YP_007124636.1| ATP-dependent DNA helicase RecG [Microcoleus sp. PCC 7113]
gi|428255271|gb|AFZ21230.1| ATP-dependent DNA helicase RecG [Microcoleus sp. PCC 7113]
Length = 831
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 160/428 (37%), Positives = 232/428 (54%), Gaps = 50/428 (11%)
Query: 313 LHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHY--EMREYNIDVLKD 370
+ L +FF GTR++ + + + ++ G V SG V+ N Y + + ++VL
Sbjct: 223 IKLNRFFAGTRYSHRGWQEQNKYRYPPGTVVAASGLVK----KNKYGLTLEDPQLEVLDH 278
Query: 371 ED-DLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLF 429
D + GR P+YP G+ A ++R + +P+P + +++GL+ +
Sbjct: 279 ADGTIDSLTIGRVVPVYPLTDGVPADIVRLAVIAVTPYASQLKEPLPSAVRKQYGLIGVS 338
Query: 430 DAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRL 489
DA IH P D AR+RL+FDEFFYLQLG L ++ L ++
Sbjct: 339 DAIANIHFPADSDTLAAARRRLVFDEFFYLQLGFL-----------QRRQALKRHE---- 383
Query: 490 NAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVA 549
+A + L + + LP+ LT +Q I++I+ DL+ PMNRL+QGDVG GKTVVA
Sbjct: 384 TSAVLVPTGQLINRFHQLLPFELTKAQKRVINDILNDLQSSTPMNRLVQGDVGSGKTVVA 443
Query: 550 FLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSR 609
LA + I SGYQAA M PTE+LA QHY L+ + + H P + LLTGST K+ R
Sbjct: 444 VLAILAAIQSGYQAALMAPTEVLAEQHYRKLVGWFNLL----HLP-VELLTGSTTTKKRR 498
Query: 610 MIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSS 669
I L+TG++ L++GTH+LI + V F L L ++DEQ RFGV QR R K
Sbjct: 499 QIHAQLETGELPLLVGTHALIQDTVNFQQLGLVVIDEQHRFGVQQRARLQQK-------- 550
Query: 670 GMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYI 729
+PHVL M+ATPIPRTLAL L+GD+ ++QI +LPPGR I T +
Sbjct: 551 ---------------GQSPHVLTMTATPIPRTLALTLHGDLDVSQIDELPPGRQQIHTTV 595
Query: 730 IEGNEKGY 737
+ G E+ +
Sbjct: 596 LSGKERNH 603
>gi|33240278|ref|NP_875220.1| ATP-dependent DNA helicase RecG [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33237805|gb|AAP99872.1| RecG-like helicase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 841
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 188/545 (34%), Positives = 278/545 (51%), Gaps = 79/545 (14%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFIG 264
+D + V G+ ++ + ++ LL H+PR Y D + + L G+ I
Sbjct: 142 IDSPLGEVKGVGTKMCECFAALNLFVIKDLLFHYPRDYVDYSSLKRIFSLVPGETTTIIA 201
Query: 265 EIISSRGMKA--GCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGT 322
I S + + S LE+ E +G + + KFF G
Sbjct: 202 TIRRSNSYTSPRNQNLSILEL-------HLEDMTG--------------RIKISKFFIGR 240
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYN---IDVLKDEDDLSLRAK 379
RF+ FLK E + G V VSG V+ N Y + +N I+VL+ + L L+++
Sbjct: 241 RFSKRSFLKKQESLYPKGTIVAVSGLVKG----NSYG-KSFNDPLIEVLEHKQAL-LKSQ 294
Query: 380 --GRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQ 437
GR PIY GL A LR + + DP+P + LL +A IH+
Sbjct: 295 TIGRILPIYQLTDGLKADRLRQIVHSVIPLALDLEDPLPVNTRESLSLLDKGEAIKQIHR 354
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGW 497
P++ + A++RL+FDEF +LQLG L + LE LG ++K R EG+
Sbjct: 355 PRNQEYLKKAKRRLVFDEFLFLQLGLLKRRLE-LGKCKAPSLFINKER---------EGF 404
Query: 498 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
T++ L+ LP++LT+SQ +++I D+ PM+RL+QGDVGCGKTVVA A + +
Sbjct: 405 ---TEQFLKLLPFALTNSQQQVLTQIESDIAMSKPMSRLVQGDVGCGKTVVAIAALLRAV 461
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
SG+Q AFM PTE+LA QHY L K L + + LLTGST K+ + I DL
Sbjct: 462 ESGWQGAFMAPTEVLAQQHYLTLCKWLPQLH-----VTVELLTGSTAAKERKRIFADLSN 516
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
G++ +++GTH+LI E V F L L +VDEQ RFGV QR +K
Sbjct: 517 GNLKIIVGTHALIEESVSFRRLGLVVVDEQHRFGVNQRNLLLNK---------------- 560
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK-- 735
+ PH+L M+ATPIPRTLAL+++GD+ ++QI +LPPGR PI+T ++ +E+
Sbjct: 561 -------GLHPHLLTMTATPIPRTLALSIHGDLDVSQINELPPGRTPIETQLMPSSERYQ 613
Query: 736 GYENV 740
YE +
Sbjct: 614 AYEAI 618
>gi|428319322|ref|YP_007117204.1| ATP-dependent DNA helicase RecG [Oscillatoria nigro-viridis PCC
7112]
gi|428243002|gb|AFZ08788.1| ATP-dependent DNA helicase RecG [Oscillatoria nigro-viridis PCC
7112]
Length = 837
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 193/566 (34%), Positives = 290/566 (51%), Gaps = 78/566 (13%)
Query: 182 PALPNESSTSSEVGSLPSEA--SIEP-----LLDKCISCVPGLSKRLYHQLENCGFYTLR 234
PA N S ++ S+P A S P LD+ ++ G+ ++L G YT+
Sbjct: 108 PANANASEPTAPALSVPRTAPLSTAPPPPSLTLDQQLTRTAGIGPANGNRLAKLGLYTVY 167
Query: 235 KLLHHFPRTYADL-QNAQI-DLDDGQYFIFIGEIISSRGMKA--GCSFSFLEVIVGCEIA 290
LL+++PR + D + QI +L G+ I E+ + + LEVI+
Sbjct: 168 DLLYYYPRNHIDYAKQVQIRELVAGETVTLIAEVKRCNCFSSPKNKKLTILEVILKDRTG 227
Query: 291 DTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVR 350
+ + + +FF G R+++ + + + ++ G + SG V+
Sbjct: 228 E---------------------IKISRFFAGPRYSNRGWQEFKKREYCTGAVLAASGLVK 266
Query: 351 AMRSNNHYEMREYNIDVLKDEDDLSLRAK-GRPYPIYPSKGGLNASLLRDTIARALQALP 409
+ E E ++VL D K GR P+YP G++A +R +I A+ A
Sbjct: 267 QGKYGITLENPE--LEVLDDSGGAIESMKVGRLIPVYPLTEGVDAGSVRRSILAAMPAAK 324
Query: 410 ANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLE 469
+ +P+++ + +GL+ L DA IH P D AR+RL+FDEFFYLQLG +L+
Sbjct: 325 MLPESLPEDLRERYGLMGLADAVTNIHFPLDRDCLAAARRRLVFDEFFYLQLG----LLK 380
Query: 470 GLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQ 529
TQ RK + +A + L + LP++LT++Q I++I+ DL
Sbjct: 381 RRQTQ----------RKAQASAVLIPS-GKLIEHFYEILPFALTNAQERVINDILNDLAS 429
Query: 530 PVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEE 589
P PMNRL+QGDVG GKTVVA +A + I SGYQAA M PTE+LA QHY L+ + M
Sbjct: 430 PQPMNRLVQGDVGAGKTVVAVVAMLAAIQSGYQAALMAPTEVLAEQHYRKLVGWFNLMH- 488
Query: 590 DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQR 649
+ LLTGST V + R I L+TG++ +++GTH+LI + V F L LA++DEQ R
Sbjct: 489 ----LSVELLTGSTKVAKRREIHNQLETGELPVLVGTHALIQDTVNFHKLGLAVIDEQHR 544
Query: 650 FGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGD 709
FGV+QR + K APHVL M+ATPIPRTLAL L+GD
Sbjct: 545 FGVLQRAKLQQK-----------------------GEAPHVLTMTATPIPRTLALTLHGD 581
Query: 710 MSLTQITDLPPGRIPIKTYIIEGNEK 735
+ ++QI +LPPGR I+T ++ E+
Sbjct: 582 LDVSQIDELPPGRQAIQTTVLSAKER 607
>gi|352093821|ref|ZP_08954992.1| ATP-dependent DNA helicase RecG [Synechococcus sp. WH 8016]
gi|351680161|gb|EHA63293.1| ATP-dependent DNA helicase RecG [Synechococcus sp. WH 8016]
Length = 844
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 178/540 (32%), Positives = 276/540 (51%), Gaps = 69/540 (12%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN-AQID-LDDGQYFIFIG 264
L+ ++ V G+ +L +L + G +R L+ H+PR Y D +I+ L+ G+ +
Sbjct: 145 LESPLARVHGIGPKLAERLASLGLLVVRDLIQHYPRDYVDYSALRRIEALEAGETATIVA 204
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
+ S G + + + I+ ++ D +G+ K + +F G RF
Sbjct: 205 TVRRSHGFTSPRNPNL--SIIELQLQDP------------TGRIK-----VTRFLAGKRF 245
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDED-DLSLRAKGRPY 383
++ +L ++ VG V VSG V++ ++ + I+V++ + L R GR
Sbjct: 246 SNPSYLHGQTRQYPVGATVAVSGLVKSGPYGVSFQ--DPLIEVMESANAPLRSRQIGRLL 303
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
P+YP GL A R + L A+ +P+P + GLL A + IH+P+ ++
Sbjct: 304 PVYPLTEGLTADRFRSLVEAVLPAVRLWPEPLPAPRREARGLLARDQALVAIHRPESSEQ 363
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAY-MEGWSSLTK 502
AR RL+FDEF LQL + ++ L + P L+ EG L
Sbjct: 364 LQQARHRLVFDEFLLLQL-----------SLMQRRAALRQRSAPVLHGGLDCEG---LVG 409
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
+ L LP+ LT +Q ++I DL++P PM RL+QGDVG GKTVVA A + + +G+Q
Sbjct: 410 RFLSLLPFELTGAQKRVFADIEQDLERPEPMARLVQGDVGSGKTVVAIAALLRAVEAGWQ 469
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
A M PTE+LA QHY L L + + LLTGSTP + R I DL G + +
Sbjct: 470 GALMAPTEVLAAQHYRSLCSWLPPLHV-----SVELLTGSTPRRSRRQILSDLAGGTLRI 524
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
++GTH+L+ + VEF L L +VDEQ RFGV QR R
Sbjct: 525 LVGTHALLEDPVEFERLGLVVVDEQHRFGVRQRNRLL----------------------- 561
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYK 742
D+ + PH+L M+ATPIPRTLAL+L+GD+ ++QI +LPPGR PI+T +++ +E+ E Y+
Sbjct: 562 DKGLQPHLLTMTATPIPRTLALSLHGDLDVSQIDELPPGRTPIRTKVVKSSER--EEAYE 619
>gi|298492967|ref|YP_003723144.1| ATP-dependent DNA helicase RecG ['Nostoc azollae' 0708]
gi|298234885|gb|ADI66021.1| ATP-dependent DNA helicase RecG ['Nostoc azollae' 0708]
Length = 827
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 179/538 (33%), Positives = 279/538 (51%), Gaps = 75/538 (13%)
Query: 205 PLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIG 264
P +++ +S + + R L T+R LL ++PR + D Q+++ +
Sbjct: 128 PKIEQKLSDIAEIGIRKAENLARLDLLTVRDLLFYYPRDHIDYAR-QVNIQE-------- 178
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNI----DSGQKKKIYLHLKKFFR 320
++ G + + + + C + ++ + ++GQ K + +F+
Sbjct: 179 -------LQGGETVTIIATVKRCNCFTSPKNKKLSILELMLKDNTGQIK-----VARFYA 226
Query: 321 GTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDD-LSLRAK 379
G RF+S + +S++ ++ V + G V+A S + ++VL + D ++
Sbjct: 227 GARFSSRAWQESLKRRYAVDSVIAACGLVKA--SKYGLTLDNPELEVLANPGDAINSLTI 284
Query: 380 GRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPK 439
GR PIY G+ A+ +R + AL A DP+P + Q++GL+ L D IH P+
Sbjct: 285 GRVVPIYALTEGVMANTVRQAVIAALPAAVNLKDPLPGGLRQKYGLMELKDGIANIHFPE 344
Query: 440 HIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPR--LNAAYMEGW 497
D AR+RL+FDEFFYLQLG LL + RK + +A +
Sbjct: 345 DSDTLKTARRRLVFDEFFYLQLG-----------------LLQRQRKAKEIQTSAVLAPK 387
Query: 498 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
L ++ LP+ LT +Q I++I+ DL++P PMNRL+QGDVG GKTVVA +A + I
Sbjct: 388 GKLLEQFNEILPFKLTKAQQRVINDILNDLQKPTPMNRLIQGDVGSGKTVVAVVAILAAI 447
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
SGYQAA M PTE+LA QHY L+ + + H P + LLTGST + R I L+T
Sbjct: 448 QSGYQAALMAPTEVLAEQHYRKLVSWFNLL----HLP-VELLTGSTKTPKRREIHSQLET 502
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
G++ L++GTH+LI +KV F L L ++DEQ RFGV QR + K
Sbjct: 503 GELPLLVGTHALIQDKVNFQQLGLVVIDEQHRFGVEQRAKLRQK---------------- 546
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
PHVL M+ATPIPRTLAL ++GD+ ++QI +LPPGR I+T ++ G ++
Sbjct: 547 -------GEQPHVLTMTATPIPRTLALTVHGDLDVSQIDELPPGRQQIQTTLLIGQQR 597
>gi|428297603|ref|YP_007135909.1| ATP-dependent DNA helicase RecG [Calothrix sp. PCC 6303]
gi|428234147|gb|AFY99936.1| ATP-dependent DNA helicase RecG [Calothrix sp. PCC 6303]
Length = 835
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 177/538 (32%), Positives = 277/538 (51%), Gaps = 71/538 (13%)
Query: 203 IEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIF 262
+ P +D+ +S + + R +L G T+R LL ++PR + D + Q+++ +
Sbjct: 134 LAPEIDQKLSELAEIGPRRAEKLARLGLCTVRDLLFYYPRDHIDYAH-QVNISE------ 186
Query: 263 IGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEV----VNIDSGQKKKIYLHLKKF 318
+KAG S + + I C + + V +SG+ K + +F
Sbjct: 187 ---------LKAGESVTIIATIKSCNCFTSPKNKKLSIFELQVRDNSGRIK-----ISRF 232
Query: 319 FRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDE-DDLSLR 377
+ G R+ S + + ++ ++ G + G V+ + + E ++VL D +
Sbjct: 233 YAGARYASRGWQEGMKRQYAPGTIIAACGLVKETKYGKTIDNPE--MEVLGHPGDTIESL 290
Query: 378 AKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQ 437
GR PIY G+ A+++R+ + A+ A DP+P + Q++ L+ L A IH
Sbjct: 291 TIGRVVPIYALTEGVIANMIREAVIAAMPATIHLKDPLPSGLRQKYNLMELKAAINNIHF 350
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGW 497
P D AR+RL+FDEFFYLQLG L + + Q +A +
Sbjct: 351 PPENDSLKAARRRLVFDEFFYLQLGLLQRQKQAKQVQ---------------TSAILAPT 395
Query: 498 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
L + + LP+ LT +Q +++I+ DL++P PMNRL+QGDVG GKTVVA +A + I
Sbjct: 396 GELLDEFYKILPFQLTGAQERVLNDILTDLQKPAPMNRLVQGDVGSGKTVVAIIAILAAI 455
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
SGYQAA M PTE+LA QHY L+ + + H P + LLTGST V + R I L T
Sbjct: 456 QSGYQAALMAPTEVLAEQHYRKLVSWFNLL----HLP-VELLTGSTKVVKRRQIHSQLST 510
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
G++ L++GTH+LI + V+F+ L L ++DEQ RFGV QR + K
Sbjct: 511 GELPLLVGTHALIQDPVKFNRLGLVVIDEQHRFGVEQRAKLQQK---------------- 554
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
PHVL M+ATPIPRTLAL ++GD+ ++QI +LPPGR I+T + +++
Sbjct: 555 -------GEQPHVLTMTATPIPRTLALTIHGDLDVSQIDELPPGRQAIQTTALTASQR 605
>gi|427737643|ref|YP_007057187.1| ATP-dependent DNA helicase RecG [Rivularia sp. PCC 7116]
gi|427372684|gb|AFY56640.1| ATP-dependent DNA helicase RecG [Rivularia sp. PCC 7116]
Length = 835
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 183/534 (34%), Positives = 276/534 (51%), Gaps = 63/534 (11%)
Query: 203 IEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIF 262
+ P LDK +S +P + + +L G T+R LL++FPR + D N +
Sbjct: 134 LAPELDKKLSDLPEIGFKRASKLYRLGLSTVRDLLYYFPRDHIDYANQ----------VC 183
Query: 263 IGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGT 322
I + ++AG + + + + C + ++ I + L + +F+ G
Sbjct: 184 IAQ------LQAGETVTLVATVKRCNCFSSPKNKKLTILEIQLKDNSGL-LKISRFYAGN 236
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKD-EDDLSLRAKGR 381
R++S + +SI+ ++ G V G V+ S + ++VL + ED++ GR
Sbjct: 237 RYSSRGWQESIKRRYVAGSTVAACGLVK--ESKYGLTLDNPELEVLANPEDEIESLTVGR 294
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
P+Y G+ AS +R + AL A +P+PK + ++ L+ L DA IH P
Sbjct: 295 VVPVYSLTEGVVASTVRQAVVAALPATAHLKEPLPKGLRTKYQLMELKDAINNIHFPPDS 354
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
D AR+RL+FDEFFYLQLG L + + Q +A + L
Sbjct: 355 DSLRAARRRLVFDEFFYLQLGLLQRQQKARKAQ---------------TSAILAPQGELL 399
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
++ LP++LT +Q + +I+ DL++P PMNRL+QGDVG GKTVVA +A + I SGY
Sbjct: 400 QQFHEILPFNLTGAQERVVQDILNDLQKPAPMNRLVQGDVGSGKTVVAVIAIIAAIQSGY 459
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
QAA M PTE+LA QHY L+ + + H P + LLTGST + R I L+TG++
Sbjct: 460 QAALMAPTEVLAEQHYRKLVSWFNLL----HLP-VDLLTGSTKTAKRRQIHAQLETGELP 514
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
L++GTH+LI + V F L L ++DEQ RFGV QR R K
Sbjct: 515 LLVGTHALIQDPVNFQKLGLVVIDEQHRFGVEQRARLQQK-------------------- 554
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
PHVL M+ATPIPRTLAL ++GD+ ++QI +LPPGR IKT + +E+
Sbjct: 555 ---GEQPHVLTMTATPIPRTLALTIHGDLDVSQIDELPPGRQKIKTTALRASER 605
>gi|113954884|ref|YP_730486.1| ATP-dependent DNA helicase RecG [Synechococcus sp. CC9311]
gi|113882235|gb|ABI47193.1| ATP-dependent DNA helicase RecG [Synechococcus sp. CC9311]
Length = 857
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 178/540 (32%), Positives = 275/540 (50%), Gaps = 69/540 (12%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN-AQID-LDDGQYFIFIG 264
L+ ++ V G+ +L +L + G +R L+ H+PR Y D +I+ L+ G+ +
Sbjct: 158 LESPLARVHGIGPKLAERLASLGLLVVRDLIQHYPRDYVDYSALRRIEALEAGETATIVA 217
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
+ S G + + + I+ ++ D +G+ K + +F G RF
Sbjct: 218 TVRRSHGFTSPRNPNL--SIIELQLQDP------------TGRIK-----VTRFLAGKRF 258
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDED-DLSLRAKGRPY 383
++ +L ++ VG V VSG V++ ++ + I+V++ + L R GR
Sbjct: 259 SNPSYLHGQTRQYPVGATVAVSGLVKSGPYGVSFQ--DPLIEVMESANAPLRSRQIGRLL 316
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
P+YP GL A R + L A+ +P+P + GL+ A + IH+P+ ++
Sbjct: 317 PVYPLTEGLTADRFRSLVEAVLPAVRFWPEPLPASRREARGLMARDQALVAIHRPETSEQ 376
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAY-MEGWSSLTK 502
AR RL+FDEF LQL + ++ L + P L+ EG L
Sbjct: 377 LQQARHRLVFDEFLLLQL-----------SLMQRRAALRQRSAPVLHGVVEREG---LVG 422
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
+ L LP+ LT +Q SEI DL++P PM RL+QGDVG GKTVVA A + + +G+Q
Sbjct: 423 RFLSLLPFELTGAQKRVFSEIEQDLERPEPMARLVQGDVGSGKTVVAIAALLRAVEAGWQ 482
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
A M PTE+LA QHY L L + + LLTGSTP + R I DL G + +
Sbjct: 483 GALMAPTEVLAAQHYRSLCCWLPPLHV-----SVELLTGSTPRRSRRQILSDLSGGTLRI 537
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
++GTH+L+ + V F L L +VDEQ RFGV QR R
Sbjct: 538 LVGTHALLEDPVAFDRLGLVVVDEQHRFGVRQRNRLL----------------------- 574
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYK 742
D+ + PH+L M+ATPIPRTLAL+L+GD+ ++QI +LPPGR PI+T +++ +E+ E Y+
Sbjct: 575 DKGLQPHLLTMTATPIPRTLALSLHGDLDVSQIDELPPGRTPIRTRVVKSSER--EEAYE 632
>gi|334120722|ref|ZP_08494800.1| ATP-dependent DNA helicase RecG [Microcoleus vaginatus FGP-2]
gi|333455994|gb|EGK84632.1| ATP-dependent DNA helicase RecG [Microcoleus vaginatus FGP-2]
Length = 837
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 192/566 (33%), Positives = 290/566 (51%), Gaps = 78/566 (13%)
Query: 182 PALPNESSTSSEVGSLPSEA--SIEP-----LLDKCISCVPGLSKRLYHQLENCGFYTLR 234
PA N S ++ S+P A S P LD+ ++ V G+ ++L G YT+
Sbjct: 108 PANANASEPTAPALSVPRTAPLSTAPPPPSLTLDQQLTRVTGIGPANGNRLAKLGLYTVY 167
Query: 235 KLLHHFPRTYADL-QNAQI-DLDDGQYFIFIGEIISSRGMKA--GCSFSFLEVIVGCEIA 290
LL+++PR + D + QI +L G+ I E+ + + LEVI+
Sbjct: 168 DLLYYYPRNHIDYAKQVQIRELVAGETVTLIAEVKRCNCFSSPKNKKLTILEVILKDRTG 227
Query: 291 DTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVR 350
+ + + +FF G R+++ + + + ++ G + SG V+
Sbjct: 228 E---------------------IKISRFFAGPRYSNRGWQEFKKREYCTGAVLAASGLVK 266
Query: 351 AMRSNNHYEMREYNIDVLKD-EDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALP 409
+ E E ++VL D E + GR P+YP G++A +R +I A+ A
Sbjct: 267 QGKYGITLENPE--LEVLDDSEGAIESMKVGRLIPVYPLTEGVDAGSVRRSILAAMPAAK 324
Query: 410 ANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLE 469
+ +P+++ + +GL+ L DA IH P D AR+RL+FDEFFYLQLG +L+
Sbjct: 325 MLPESLPEDLRERYGLMGLADAVTNIHFPLDRDCLAAARRRLVFDEFFYLQLG----LLK 380
Query: 470 GLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQ 529
TQ RK + +A + L + LP++LT++Q I++I+ DL
Sbjct: 381 RRQTQ----------RKAQASAVILPT-GKLIEHFYEILPFALTNAQERVINDILNDLAS 429
Query: 530 PVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEE 589
PMNRL+QGDVG GKTVVA +A + I SGYQAA M PTE+LA QHY L+ + M
Sbjct: 430 SQPMNRLVQGDVGAGKTVVAVVAMLAAIQSGYQAALMAPTEVLAEQHYRKLVGWFNLMH- 488
Query: 590 DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQR 649
+ LLTGST + + R I L+TG++ +++GTH+LI + V F L LA++DEQ R
Sbjct: 489 ----LSVELLTGSTKIAKRREIHNQLETGELPVLVGTHALIQDTVNFHKLGLAVIDEQHR 544
Query: 650 FGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGD 709
FGV QR + K APHVL M+ATPIPRTLAL L+GD
Sbjct: 545 FGVHQRAKLQQK-----------------------GEAPHVLTMTATPIPRTLALTLHGD 581
Query: 710 MSLTQITDLPPGRIPIKTYIIEGNEK 735
+ ++QI +LPPGR I+T ++ E+
Sbjct: 582 LDVSQIDELPPGRQAIQTTVLSAKER 607
>gi|428220627|ref|YP_007104797.1| ATP-dependent DNA helicase RecG [Synechococcus sp. PCC 7502]
gi|427993967|gb|AFY72662.1| ATP-dependent DNA helicase RecG [Synechococcus sp. PCC 7502]
Length = 815
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 189/532 (35%), Positives = 277/532 (52%), Gaps = 74/532 (13%)
Query: 208 DKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADL--QNAQIDLDDGQYFIFIGE 265
+ +S V GL+ +L+ T+ +L +FPR + D Q A DL+DG IG
Sbjct: 119 ETLLSEVEGLNGSQISKLKLLDIETVGDMLRYFPRDHIDYARQVAIADLNDGDTVTVIGT 178
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNID-SGQKKKIYLHLKKFFRGTRF 324
I + C S E + E++ D SGQ K L +F+ G R+
Sbjct: 179 I-----RRFNCFTS----------PKNENLTIVEILLRDRSGQIK-----LNRFWMGKRY 218
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDE-DDLSLRAKGRPY 383
++ + + + + VG V SG V+ RS + Y++++L D + GR
Sbjct: 219 SNRGWQEQQKRLYPVGSTVAASGMVK--RSKYGLTLENYDLEILDHTGDRIESNTIGRVV 276
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
P+YP G++ L+R TI + L A+ DP+P+++ ++ LL L +A IH P ++
Sbjct: 277 PVYPLTEGVSPELVRGTIIKCLPAVGKLADPIPQKLKDDYDLLGLPEAIAQIHYPDDTEK 336
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
+ A KRL FD++FY +L LY+ + QF PR S L +K
Sbjct: 337 LNAAIKRLSFDKYFYRRLVALYRRQQQKAIQF----------IPR---------SQLIEK 377
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
L LP+ LT++Q AI+EI DL++P PMNRL+QGDVG GKT+VA A + I SGYQ
Sbjct: 378 LEEILPFQLTNAQKRAIAEIREDLQRPNPMNRLVQGDVGSGKTIVAVYALLSAIESGYQT 437
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
AFM PTE+LA QHY LL+ + H P + LLTGST + R I L+TG++ L+
Sbjct: 438 AFMAPTEVLAEQHYRKLLEWFTLL----HLP-VELLTGSTKTAKRRQILSQLETGELPLL 492
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
IGTH+LI + V F+ L LA++DEQ RFG QR + K +D
Sbjct: 493 IGTHALIQDTVNFNQLGLAVIDEQHRFGRDQRSQLLQK-------------------GED 533
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
PHVL M+ATPIPRTL L ++ ++ I +LPPGR PI T +++ ++
Sbjct: 534 ----PHVLIMTATPIPRTLYLT-NSEIEVSIIDELPPGRKPIHTTLLKAGQR 580
>gi|318041336|ref|ZP_07973292.1| ATP-dependent DNA helicase RecG [Synechococcus sp. CB0101]
Length = 805
Score = 265 bits (677), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 188/549 (34%), Positives = 275/549 (50%), Gaps = 79/549 (14%)
Query: 201 ASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQ 258
ASI P D +S + G+ + +L + R L+ ++PR Y D N L+ G+
Sbjct: 104 ASIRP--DTPLSEIKGVGPKSATRLAALDLWVARDLVRYYPRDYLDYSNLVRIAALEPGR 161
Query: 259 YFIFIGEIISSRGMKA--GCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLK 316
+ + S + + S LE+ ++AD +G+ + +
Sbjct: 162 TATIVATVRRSHSFTSPRNPNLSILEL----QLADI------------TGR-----IRIS 200
Query: 317 KFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKD-EDDLS 375
KFF G RF+S +LK+ + ++ G V VSG V+ ++ + ++VL +
Sbjct: 201 KFFAGKRFSSPAWLKAQQRQYPTGATVAVSGLVKETPYGPAFQ--DPLMEVLASPHAPVQ 258
Query: 376 LRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGI 435
GR P+Y GL+A LR + L A DP+P I Q+ L+ L A I
Sbjct: 259 SEQIGRLLPVYGLTEGLSADRLRALVRPLLAAAQGWPDPLPASIQQQEQLVNLGTALTQI 318
Query: 436 HQPKHIDEADLA--RKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAY 493
H P D+A LA R+RL+FDEF YLQLG L ++ L P LN
Sbjct: 319 HAPS--DQASLAKARRRLVFDEFLYLQLGLL-----------QRRRQLTSRPAPALNNPS 365
Query: 494 MEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLAC 553
+L L LP+ LT +Q ++EI DL++ PM RL+QGDVG GKTVVA A
Sbjct: 366 ----GTLLPAFLELLPFPLTGAQQRVLAEIRADLERQEPMARLVQGDVGSGKTVVAIAAL 421
Query: 554 MEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRK 613
+ I +G Q A M PTE+LA QHY L + L + ALLTGSTP ++ R +
Sbjct: 422 LTAIEAGCQGALMAPTEVLAEQHYRKLCEWLPQLHVS-----CALLTGSTPARRRRELLA 476
Query: 614 DLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAM 673
DL G + +++GTH+L+ + V+F+ L L +VDEQ RFGV QR R
Sbjct: 477 DLANGTLKMLVGTHALLEDPVQFARLGLVVVDEQHRFGVHQRNRLL-------------- 522
Query: 674 VNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN 733
D+ + PH+L M+ATPIPRTLAL+L+GD+ ++QI +LPPGR PI+T ++
Sbjct: 523 ---------DKGLQPHLLTMTATPIPRTLALSLHGDLEVSQIDELPPGRTPIRTALLSAA 573
Query: 734 EKGYENVYK 742
E+ E Y+
Sbjct: 574 ER--EQAYQ 580
>gi|86606655|ref|YP_475418.1| ATP-dependent DNA helicase RecG [Synechococcus sp. JA-3-3Ab]
gi|86555197|gb|ABD00155.1| ATP-dependent DNA helicase RecG [Synechococcus sp. JA-3-3Ab]
Length = 773
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 182/527 (34%), Positives = 265/527 (50%), Gaps = 69/527 (13%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L++ + + G+ + +L G +T+R L++FPR + D
Sbjct: 76 LEQPLQFLKGIGPKSAEKLAQLGLHTVRDALYYFPRDHLDYSRR---------------- 119
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
+ R K G + + + + C + ++N+ K I + L +F+ G +F
Sbjct: 120 VLIRQAKVGETVTLVGTVKSCSCFTSPKNPLLTILNLKIADKSGI-VTLSRFYSGRQFAQ 178
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
+ ++E ++ G V SG V+ R + ++VL E + R G+ P+Y
Sbjct: 179 RSWQAALERQYPKGAVVAASGLVKKGRLG--LTLDNPQLEVLGGEGEDPERL-GKILPVY 235
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL 446
P G+ A L+R + AL A DP+P+ + ++ LL L A IH PK +
Sbjct: 236 PLSEGIPADLVRKAVQLALPAAALVEDPLPEPLKRQLQLLDLPLALQQIHFPKTQELLAQ 295
Query: 447 ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAA----YMEGWSSLTK 502
AR+RL+FDEFFYLQL LL + ++ R A Y L
Sbjct: 296 ARRRLVFDEFFYLQLS-----------------LLQRRQRYRAQAQAVPRYQPARGELLD 338
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
+ + LP+ LT+ Q AI EI+ DL+ P+PMNRLLQGDVG GKTVVA A + I SG+Q
Sbjct: 339 RFYQILPFQLTAGQQRAIDEILADLRDPLPMNRLLQGDVGSGKTVVAVAALLAAIQSGWQ 398
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
AA M PTE+LA QHY L++ L ++ + LLTGSTP + R I + LQTG++ L
Sbjct: 399 AALMAPTEVLAEQHYRKLVEWLSQLQV-----PVELLTGSTPPAKRREILRQLQTGELPL 453
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
V+GTH+LI V+F L L ++DEQ RFGV QR K +
Sbjct: 454 VVGTHALIQPAVQFRNLGLVVIDEQHRFGVEQRAALQQKGDH------------------ 495
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYI 729
P VL M+ATPIPRTL LAL+GD+ +TQI +LPPGR P+ T +
Sbjct: 496 -----PDVLTMTATPIPRTLTLALHGDLDVTQIDELPPGRKPVHTVV 537
>gi|72382000|ref|YP_291355.1| ATP-dependent DNA helicase RecG [Prochlorococcus marinus str.
NATL2A]
gi|72001850|gb|AAZ57652.1| ATP-dependent DNA helicase RecG [Prochlorococcus marinus str.
NATL2A]
Length = 846
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 181/536 (33%), Positives = 269/536 (50%), Gaps = 69/536 (12%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ-ID-LDDGQYFIFIG 264
L IS V G+ + +L G +R L+++FPR Y D + + ID GQ +
Sbjct: 147 LQSTISSVKGVGSKQAERLSTLGLILIRDLINYFPRDYVDYSSLKTIDKTQAGQNVTIVA 206
Query: 265 EIISSRGMKA--GCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGT 322
++ K+ + + LE+ + + T G + + +FF G
Sbjct: 207 KVRRCSSFKSPKNPNLAILELFI------KDKTGG---------------MKITRFFAGR 245
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDD-LSLRAKGR 381
R +SI ++KS + + VG V VSG V+ S + + I+++ +D L R G+
Sbjct: 246 RSSSIAYVKSQQSLYPVGATVAVSGLVK--ESKYGKSLNDPLIEIIDSPNDYLKSRTIGQ 303
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
P+Y G+ A RD I L DP+PKE L +A+ IH P++
Sbjct: 304 ILPVYSLTEGITADKFRDLIQSILYLTSNIKDPLPKETLNRLDLPNRKEAFFHIHNPENS 363
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
A++R++FDEF LQL L + K P+L+ +SL
Sbjct: 364 MTLAKAKRRIVFDEFLLLQLSLLLRRDLH-----------KKSDSPQLSIE--PNINSLV 410
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
K L LP+SLT++Q + EI D+ + PM+RLLQGDVG GKTV+A A + + SG+
Sbjct: 411 GKFLSILPFSLTNAQRRVLKEIESDIVKAEPMSRLLQGDVGSGKTVIAISALLTAVQSGW 470
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q AFM PTE+LA+QH++ L K + +E + + LLTGSTP + + I DL G
Sbjct: 471 QGAFMAPTEVLASQHFQTLSKWIPQLEIN-----VDLLTGSTPKSRRKQILTDLVNGSTK 525
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+++GTH+L + V F L L +VDEQ RFGV QR + +K
Sbjct: 526 ILVGTHALFEDPVVFERLGLVVVDEQHRFGVKQRNKLLNK-------------------- 565
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGY 737
+ PH+L M+ATPIPRTLAL L+GD+ ++Q+ +LPPGR PI T +I NEK Y
Sbjct: 566 ---GLQPHLLTMTATPIPRTLALTLHGDLDVSQLDELPPGRTPINTQLISPNEKKY 618
>gi|115448235|ref|NP_001047897.1| Os02g0710800 [Oryza sativa Japonica Group]
gi|41052646|dbj|BAD07494.1| ATP-dependent DNA helicase RECG-like [Oryza sativa Japonica Group]
gi|41052862|dbj|BAD07776.1| ATP-dependent DNA helicase RECG-like [Oryza sativa Japonica Group]
gi|113537428|dbj|BAF09811.1| Os02g0710800 [Oryza sativa Japonica Group]
gi|215764974|dbj|BAG86671.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 410
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/189 (67%), Positives = 153/189 (80%)
Query: 554 MEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRK 613
MEVI SG+QAAFMVPTE+LA QHYEHL LL+ + D+ KP IALLTGST ++SR+IR
Sbjct: 1 MEVISSGFQAAFMVPTEVLALQHYEHLTSLLEKFDGDECKPNIALLTGSTSTRESRIIRN 60
Query: 614 DLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAM 673
L+TG+I +VIGTHSLI +K EFSALR++++DEQQRFGVVQRGRFNSKLY S S
Sbjct: 61 GLKTGEIAMVIGTHSLIGDKTEFSALRISVIDEQQRFGVVQRGRFNSKLYTPSTKSSDDD 120
Query: 674 VNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN 733
SD + + MAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGR PI+T +EGN
Sbjct: 121 TISDENSASEIFMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRQPIETLALEGN 180
Query: 734 EKGYENVYK 742
+ G+E+V++
Sbjct: 181 DAGFESVFQ 189
>gi|78212756|ref|YP_381535.1| ATP-dependent DNA helicase RecG [Synechococcus sp. CC9605]
gi|78197215|gb|ABB34980.1| ATP-dependent DNA helicase RecG [Synechococcus sp. CC9605]
Length = 812
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 196/620 (31%), Positives = 297/620 (47%), Gaps = 73/620 (11%)
Query: 126 LGSTPPVGLYDETKAGGSEMKSLLADQSCEAVVSNPMDAELRVD-RFGLSEAWPSLYPAL 184
L + P + E S++ S AD +++P L D R L E L P+
Sbjct: 34 LAAPPALPFPQEVSERMSKLSSGFADYPN---LADPARRRLVTDARQWLHELRHRLEPSA 90
Query: 185 PNESSTSSEVGSLPSEASIEPL-LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRT 243
P + +V + P + + PL LD I+ + G+ + +L + G +R LL ++PR
Sbjct: 91 PM-APPRLKVQASPQQRTSSPLQLDSPITQIRGVGPKFAARLASIGLLLVRDLLRYYPRD 149
Query: 244 YADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNI 303
+ D + I ++S G + + + I C + + ++ +
Sbjct: 150 HVDYSAMR----------RIEALVS------GETATIVATIRRCNGFVSPRNTNLAIIEL 193
Query: 304 DSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEM--R 361
Q L + +F G RF+S +LK + + VG V VSG V+ + Y + +
Sbjct: 194 QL-QDPTGRLKVSRFLAGKRFSSPAYLKGQQRLYPVGATVAVSGLVK----DGPYGITFQ 248
Query: 362 EYNIDVLKDEDDLSLRAK-GRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEIT 420
+ I+VL GR P+YP G+ A R I + L + DP+P +
Sbjct: 249 DPLIEVLDSPSSPVKSPSIGRLLPVYPLTEGVGADRFRSLIDQVLPLAASWPDPLPALLQ 308
Query: 421 QEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGL 480
++F L L D+ +H PK + D R+RL+FDEF +QLG L +
Sbjct: 309 RQFQLPALSDSLQALHAPKDRESLDQGRRRLVFDEFLLMQLGLL-----------RRRQA 357
Query: 481 LDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGD 540
L P L+ S L + + LP+ T++Q EI DL + PM RL+QGD
Sbjct: 358 LRSRTGPDLD--LQSSSSGLVGEFMDLLPFRFTAAQQRVFQEIEVDLARSEPMARLVQGD 415
Query: 541 VGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLT 600
VG GKTVVA A + I SG+Q A M PTE+LA QHY +L + L + +ALLT
Sbjct: 416 VGSGKTVVAIAALLSTIASGWQGALMAPTEVLAEQHYRNLCQWLPQLHV-----SVALLT 470
Query: 601 GSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNS 660
GSTP + R + DL G + +++GTH+L+ + V F+ L L +VDEQ RFGV QR R +
Sbjct: 471 GSTPRPRRRELLDDLANGSLKVLVGTHALLEDPVVFNRLGLVVVDEQHRFGVHQRDRLLN 530
Query: 661 KLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPP 720
K + PH+L M+ATPIPRTLAL+++GD+ ++QI +LPP
Sbjct: 531 K-----------------------GLQPHLLTMTATPIPRTLALSMHGDLDVSQIDELPP 567
Query: 721 GRIPIKTYIIEG--NEKGYE 738
GR PI+T ++ EK YE
Sbjct: 568 GRTPIRTRMLTAAKREKAYE 587
>gi|75908279|ref|YP_322575.1| ATP-dependent DNA helicase RecG [Anabaena variabilis ATCC 29413]
gi|75702004|gb|ABA21680.1| ATP-dependent DNA helicase RecG [Anabaena variabilis ATCC 29413]
Length = 822
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 190/567 (33%), Positives = 293/567 (51%), Gaps = 77/567 (13%)
Query: 175 EAWPSLYPA-LPNESSTSSEVGSLPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTL 233
EA + Y + LPN + +EV + P +D+ +S +P + R +L YT+
Sbjct: 97 EAQATSYKSKLPNATPVVAEVSR-----RLAPKIDQKLSDLPEIGIRKADKLAALRLYTV 151
Query: 234 RKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTE 293
R LL ++PR + D ++ R ++AG + + + + C +
Sbjct: 152 RDLLFYYPRDHIDYARQ----------------VNIRELEAGETVTIVATVKKCNCFTSP 195
Query: 294 TTSGDEVVNI----DSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKV 349
++ + ++GQ K + +F G RFTS + +S++ ++ VG + G V
Sbjct: 196 KNQKLSILELILKDNTGQIK-----ISRFSAGARFTSRAWQESLKRRYPVGSVLAACGLV 250
Query: 350 RAMRSNNHYEMREYNIDVLKDE-DDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQAL 408
+ + + E ++VL + D + GR PIY G+ AS++R + AL A
Sbjct: 251 KGTKYGLTLDNPE--LEVLANPGDTIESLTMGRVVPIYSLTEGVMASMVRQAVLAALPAA 308
Query: 409 PANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQML 468
DP+PK + +++GL+ L DA IH P +AR+RL+FDEFFYLQLG L +
Sbjct: 309 VHLKDPLPKGLREKYGLMELKDAIANIHFPDESATLQVARRRLVFDEFFYLQLGLLQRQQ 368
Query: 469 EGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLK 528
+ Q +A + L + LP+ LT +Q +++I+ DL+
Sbjct: 369 QAKAIQ---------------TSAILAPKGQLIENFYEILPFQLTGAQQRVLNDILNDLQ 413
Query: 529 QPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNME 588
+ PMNRL+QGDVG GKTVVA +A + I SGYQAA M PTE+LA QHY L+ + +
Sbjct: 414 KSTPMNRLVQGDVGSGKTVVAVVAILAAIQSGYQAALMAPTEVLAEQHYRKLVSWFNLL- 472
Query: 589 EDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQ 648
H P + LLTGST + R I L+TG++ L++GTH+LI + V F L L ++DEQ
Sbjct: 473 ---HLP-VELLTGSTKTVKRRQIHSQLETGELPLLVGTHALIQDPVNFQRLGLVVIDEQH 528
Query: 649 RFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYG 708
RFGV QR A++ G PHVL M+ATPIPRTLAL ++G
Sbjct: 529 RFGVKQR----------------ALLQQKGE-------QPHVLTMTATPIPRTLALTIHG 565
Query: 709 DMSLTQITDLPPGRIPIKTYIIEGNEK 735
DM+++QI +LPPGR I+T ++ G ++
Sbjct: 566 DMNVSQIDELPPGRQKIQTTMLSGQQR 592
>gi|17232281|ref|NP_488829.1| ATP-dependent DNA helicase RecG [Nostoc sp. PCC 7120]
gi|17133926|dbj|BAB76488.1| DNA helicase [Nostoc sp. PCC 7120]
Length = 822
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 190/567 (33%), Positives = 293/567 (51%), Gaps = 77/567 (13%)
Query: 175 EAWPSLYPA-LPNESSTSSEVGSLPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTL 233
EA + Y + LPN + +EV + P +D+ +S +P + R +L YT+
Sbjct: 97 EAQATSYKSKLPNATPVVAEVSR-----RLAPKIDQKLSDLPEIGIRKADKLAALRLYTV 151
Query: 234 RKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTE 293
R LL ++PR + D ++ R ++AG + + + + C +
Sbjct: 152 RDLLFYYPRDHIDYARQ----------------VNIRELEAGETVTIVATVKKCNCFTSP 195
Query: 294 TTSGDEVVNI----DSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKV 349
++ + ++GQ K + +F G RFTS + +S++ ++ VG + G V
Sbjct: 196 KNQKLSILELILKDNTGQIK-----ISRFSAGARFTSRAWQESLKRRYPVGSVLAACGLV 250
Query: 350 RAMRSNNHYEMREYNIDVLKDE-DDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQAL 408
+ + + E ++VL + D + GR PIY G+ AS++R + AL A
Sbjct: 251 KGTKYGLTLDNPE--LEVLANPGDTIESLTMGRVVPIYSLTEGVMASMVRQAVLAALPAA 308
Query: 409 PANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQML 468
DP+PK + +++GL+ L DA IH P +AR+RL+FDEFFYLQLG L +
Sbjct: 309 VHLKDPLPKGLREKYGLMELKDAIANIHFPDESATLQVARRRLVFDEFFYLQLGLLQRQQ 368
Query: 469 EGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLK 528
+ Q +A + L + LP+ LT +Q +++I+ DL+
Sbjct: 369 QAKAIQ---------------TSAILAPKGKLIENFYEILPFQLTGAQQRVLNDILNDLQ 413
Query: 529 QPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNME 588
+ PMNRL+QGDVG GKTVVA +A + I SGYQAA M PTE+LA QHY L+ + +
Sbjct: 414 KSAPMNRLVQGDVGSGKTVVAVVAILAAIQSGYQAALMAPTEVLAEQHYRKLVSWFNLL- 472
Query: 589 EDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQ 648
H P + LLTGST + R I L+TG++ L++GTH+LI + V F L L ++DEQ
Sbjct: 473 ---HLP-VELLTGSTKTVKRRQIHSQLETGELPLLVGTHALIQDPVNFQRLGLVVIDEQH 528
Query: 649 RFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYG 708
RFGV QR A++ G PHVL M+ATPIPRTLAL ++G
Sbjct: 529 RFGVKQR----------------ALLQQKGE-------QPHVLTMTATPIPRTLALTIHG 565
Query: 709 DMSLTQITDLPPGRIPIKTYIIEGNEK 735
DM+++QI +LPPGR I+T ++ G ++
Sbjct: 566 DMNVSQIDELPPGRQKIQTTMLSGQQR 592
>gi|428321137|ref|YP_007151219.1| ATP-dependent DNA helicase RecG [Oscillatoria nigro-viridis PCC
7112]
gi|428244806|gb|AFZ10591.1| ATP-dependent DNA helicase RecG [Oscillatoria nigro-viridis PCC
7112]
Length = 694
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 183/536 (34%), Positives = 274/536 (51%), Gaps = 72/536 (13%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L I +PGL+ Y LE G T+R LL +FPR Y + +I Y + +G+
Sbjct: 3 LHSPICDLPGLNPSNYKMLERLGLATVRDLLLYFPRDYIKYRRVKI------YQLKVGDS 56
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
++ G EV+ + ++ T +V +G+ + K+FF + S
Sbjct: 57 VTVVG-----KIEHQEVVSPPK--NSRLTIQTIIVKDKTGK-----IACKRFFNHPYYQS 104
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMR----SNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
+ + G V + G V+A R + E+R +D KD K
Sbjct: 105 KKWRNEQAATYVAGGIVAICGIVKADRYCGMALTSPEIRLIGLDEAKD-------TKNSI 157
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHID 442
PIYP G++ +++D + AL++ DP+P+E ++ GL+ L A IHQP
Sbjct: 158 IPIYPLTKGVSNEIVQDAVTSALESAKLLNDPLPQEFRRQHGLMELQKAIANIHQPPDET 217
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
+ + AR+RL+FDEFFYLQL L + + LL + ++ A L +
Sbjct: 218 KLEAARRRLVFDEFFYLQLSFLVR----------RHRLLARSALTKITPA-----GPLIQ 262
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
+ LP+SLTS+Q I++I+ D+ PMNRL+QGDVG GKTVVA +A + I SGYQ
Sbjct: 263 QFYSQLPFSLTSAQHRVINDILNDMTSKTPMNRLVQGDVGSGKTVVAVVAILAAIQSGYQ 322
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
AA M PTE+LA QH+ + + + + LLTGST + R I L+TG+++L
Sbjct: 323 AALMAPTEVLAQQHHRKIAAWFERL-----GVSVQLLTGSTKTAKRREIHAQLETGELSL 377
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
++GTH+L+ EKV F+ L L ++DEQ RFGV QR +K G+
Sbjct: 378 LVGTHALLQEKVNFNKLGLVVIDEQHRFGVQQRQDLLNK----------------GN--- 418
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYE 738
PHVL M+ATPIPRTLAL L+GD+ ++QI +LPPGR I T ++ + Y+
Sbjct: 419 ----RPHVLTMTATPIPRTLALTLHGDLDVSQIDELPPGRQKIHTKVLNKSASAYD 470
>gi|220909933|ref|YP_002485244.1| ATP-dependent DNA helicase RecG [Cyanothece sp. PCC 7425]
gi|219866544|gb|ACL46883.1| ATP-dependent DNA helicase RecG [Cyanothece sp. PCC 7425]
Length = 822
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 187/554 (33%), Positives = 283/554 (51%), Gaps = 75/554 (13%)
Query: 188 SSTSSEVGSLPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADL 247
S T + + P+ S P LD+ ++ + G+ + +L G YT+R LL ++PR + D
Sbjct: 108 SPTLKTIAATPTTRS--PRLDQPLTTLSGIGPKSGDRLAKLGLYTVRDLLFYYPRDHIDY 165
Query: 248 QNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNI---- 303
Q+++ D ++AG + + + + C + ++ I
Sbjct: 166 AR-QVNIAD---------------LEAGATVTLVGTVRRCNCFSSPRNPKLTILEILIRD 209
Query: 304 DSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREY 363
SGQ K L +F+ G RF + + + + G + SG V+ S + E
Sbjct: 210 RSGQIK-----LNRFWAGDRFRQRGWQEQQKRLYAPGVVIAASGLVK--ESKFGLTLEEP 262
Query: 364 NIDVLKDEDDLSLRA--KGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQ 421
++VL D+ D L + GR P+Y G+ L+R + AL A +P+P+++ Q
Sbjct: 263 ELEVL-DQGDAKLDSLKVGRIVPVYSLSEGIPPDLVRRAVVSALPAAKHLTEPLPEKLRQ 321
Query: 422 EFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLL 481
+ L+ L +A IH P + AR+RL+FDEFFYLQLG L + + Q
Sbjct: 322 PYELISLVEAIAHIHFPPDSEALAKARQRLVFDEFFYLQLGLLQRRQQQRQQQ------- 374
Query: 482 DKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDV 541
+A + L ++ + LP+ LT +Q +++I+ DL QP PMNRL+QGDV
Sbjct: 375 --------QSAVLAPQGHLLEQFYQILPFQLTGAQQRVVNDILNDLTQPAPMNRLVQGDV 426
Query: 542 GCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTG 601
G GKTVVA +A + I SGYQ A M PTE+LA QHY L+ + + + LLTG
Sbjct: 427 GSGKTVVAVVALLAAIQSGYQTALMAPTEVLAEQHYRKLVDWFNRL-----CLPVELLTG 481
Query: 602 STPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSK 661
ST V + R I LQTG++ L++GTH+LI E VEF L L ++DEQ RFGV QR R K
Sbjct: 482 STKVAKRREIFAQLQTGELPLLVGTHALIQEGVEFQRLGLVVIDEQHRFGVQQRARLQQK 541
Query: 662 LYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPG 721
+PHVL M+ATPIPRTLAL L+GD+ ++QI +LPPG
Sbjct: 542 -----------------------GTSPHVLTMTATPIPRTLALTLHGDLDVSQIDELPPG 578
Query: 722 RIPIKTYIIEGNEK 735
R I+T ++ +++
Sbjct: 579 RQAIQTTVLTASDR 592
>gi|443320754|ref|ZP_21049835.1| ATP-dependent DNA helicase RecG [Gloeocapsa sp. PCC 73106]
gi|442789527|gb|ELR99179.1| ATP-dependent DNA helicase RecG [Gloeocapsa sp. PCC 73106]
Length = 815
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 185/555 (33%), Positives = 288/555 (51%), Gaps = 75/555 (13%)
Query: 188 SSTSSEVGSLPSEASIEPL-LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYAD 246
+ST SLPS++ + L++ ++ + G +K Y LE G T++ +L ++PR + D
Sbjct: 99 TSTKIAKTSLPSQSRGGDIKLEQPLTQIIGSTKSKY--LERLGLVTVQDVLFYYPRDHID 156
Query: 247 LQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIA--DTETTSGDEVVNID 304
Q+ + D + GE ++ G C+ C + + + T + ++
Sbjct: 157 YAR-QVYIKD----LVEGETVTILGRVKRCN---------CFTSPKNQKLTIFELTLSDR 202
Query: 305 SGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREY- 363
+G+ L L +++ G R+ + + + ++ ++ +G V SG V+ N Y
Sbjct: 203 TGE-----LKLNRYYPGNRYQNRGWPQKLKLQYPIGSAVAASGLVK----KNKYGFTTLE 253
Query: 364 NIDV-LKDEDDLSLRAK--GRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEIT 420
N ++ L D ++ + GR P+YP G+ A L+R+T+ AL A+ + +P I
Sbjct: 254 NPEIELMDSPGAAIESPKIGRLLPVYPLTEGVAADLVRNTVIIALGAVKQIKETLPSMIL 313
Query: 421 QEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGL 480
+++ L+ L +A IH P AR+RL+FDEFFYLQL L +
Sbjct: 314 EKYSLMRLTEAIANIHFPPDSTSLTQARRRLVFDEFFYLQLAFLRRRQSQRQQD------ 367
Query: 481 LDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGD 540
N+A L ++ LP+ LTS+Q I EI+ DL+ PMNRL+QGD
Sbjct: 368 ---------NSAIFSIRGELIEQFQELLPFELTSAQKRVIQEILPDLESSTPMNRLVQGD 418
Query: 541 VGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLT 600
VG GKTVV A + I SGYQ A M PTE+LA QHY ++ + + H P + LLT
Sbjct: 419 VGSGKTVVGVFAILAAIQSGYQTALMAPTEVLAEQHYHKIVTWFNLL----HLP-VELLT 473
Query: 601 GSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNS 660
GST + R I L TG++ L++GTH+LI + V F L L ++DEQ RFGV QR
Sbjct: 474 GSTKTAKRRDIYAQLSTGELPLIVGTHALIQDSVNFLKLGLVVIDEQHRFGVNQR----- 528
Query: 661 KLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPP 720
+S +A NS PH+L+M+ATPIPRTLAL L+GD+ ++QI +LPP
Sbjct: 529 -------ASLLAKGNS-----------PHILSMTATPIPRTLALTLHGDLDVSQIDELPP 570
Query: 721 GRIPIKTYIIEGNEK 735
GR PI+T ++ G ++
Sbjct: 571 GRQPIQTTLVTGRQR 585
>gi|242066222|ref|XP_002454400.1| hypothetical protein SORBIDRAFT_04g030170 [Sorghum bicolor]
gi|241934231|gb|EES07376.1| hypothetical protein SORBIDRAFT_04g030170 [Sorghum bicolor]
Length = 409
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 125/189 (66%), Positives = 154/189 (81%), Gaps = 1/189 (0%)
Query: 554 MEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRK 613
MEV+ SG+QAAFMVPTE+LA QHYEHL LL+ + D+ KP IALLTGST ++SR+IR
Sbjct: 1 MEVVNSGFQAAFMVPTEVLAVQHYEHLTSLLEKFDGDE-KPNIALLTGSTSTRESRIIRN 59
Query: 614 DLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAM 673
L+TG+I +VIGTHSLIA+K +FS+LR++++DEQQRFGVVQRGRFNSKLY +S
Sbjct: 60 GLKTGEIAMVIGTHSLIADKTDFSSLRISVIDEQQRFGVVQRGRFNSKLYTSSSKLSDEN 119
Query: 674 VNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN 733
+SD + + MAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGR PI+T +EGN
Sbjct: 120 TSSDETSDSETFMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRQPIETLALEGN 179
Query: 734 EKGYENVYK 742
+ G+E V++
Sbjct: 180 DVGFETVFQ 188
>gi|427727499|ref|YP_007073736.1| ATP-dependent DNA helicase RecG [Nostoc sp. PCC 7524]
gi|427363418|gb|AFY46139.1| ATP-dependent DNA helicase RecG [Nostoc sp. PCC 7524]
Length = 826
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 188/571 (32%), Positives = 291/571 (50%), Gaps = 76/571 (13%)
Query: 172 GLSEAWPSLYPALPNESSTSSEVGSLPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFY 231
G E S +PN + +EV + P +D+ +S +P + R +L Y
Sbjct: 99 GAEEQGRSYKAKVPNSAPVVAEVSR-----RLAPKIDQKLSDLPEIGIRKADKLAALRLY 153
Query: 232 TLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEI-- 289
T+R LL ++PR + D ++ R ++ G S + + + C
Sbjct: 154 TVRDLLFYYPRDHIDYARQ----------------VNIRELQGGESVTIVATVKRCNCFT 197
Query: 290 --ADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSG 347
+ + T + V+ ++GQ K + +F+ G RF+S + +S++ ++ VG V G
Sbjct: 198 SPKNQKLTILELVLKDNTGQIK-----VSRFWAGARFSSRAWQESLKRRYPVGSVVAACG 252
Query: 348 KVRAMRSNNHYEMREYNIDVLKDE-DDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQ 406
+ S + ++VL + D + GR PIY G+ A+++R + AL
Sbjct: 253 LAKG--SKYGLTLDNPELEVLANPGDTIESLTIGRVVPIYALTEGVMANMVRQAVLAALP 310
Query: 407 ALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQ 466
A DP+PK + +++GL+ L DA IH P D +AR+RL+FDEFFYLQLG L +
Sbjct: 311 AAAQLKDPLPKGLREKYGLMELKDAIANIHFPNDSDRLQIARRRLVFDEFFYLQLGLLQR 370
Query: 467 MLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWD 526
+ Q +A + L +K LP+ LT +Q +++I+ D
Sbjct: 371 QQQAKAIQ---------------TSAVLAPKGQLIEKFYEVLPFQLTGAQQRVLNDILND 415
Query: 527 LKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDN 586
L++ PMNRL+QGDVG GKTVVA +A + I SGYQAA M PTE+LA QHY L+ +
Sbjct: 416 LQKTTPMNRLVQGDVGSGKTVVAVVAILAAIQSGYQAALMAPTEVLAEQHYRKLVSWFNL 475
Query: 587 MEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDE 646
+ + P + LLTGST + + R I L TG++ L++GTH+LI + V F L L ++DE
Sbjct: 476 L----YLP-VELLTGSTKIAKRRQIHAQLATGELPLLVGTHALIQDPVNFQRLGLVVIDE 530
Query: 647 QQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALAL 706
Q RFGV QR A++ G PHVL M+ATPIPRTLAL +
Sbjct: 531 QHRFGVKQR----------------ALLQQKGE-------QPHVLTMTATPIPRTLALTI 567
Query: 707 YGDMSLTQITDLPPGRIPIKTYIIEGNEKGY 737
+GD+ ++QI +LPPGR I+T + ++ +
Sbjct: 568 HGDLDVSQIDELPPGRQAIQTTALTSQQRTF 598
>gi|427701808|ref|YP_007045030.1| ATP-dependent DNA helicase RecG [Cyanobium gracile PCC 6307]
gi|427344976|gb|AFY27689.1| ATP-dependent DNA helicase RecG [Cyanobium gracile PCC 6307]
Length = 831
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 178/532 (33%), Positives = 274/532 (51%), Gaps = 71/532 (13%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
++ VPG+ + +L G +R L+HH+PR Y D + ++
Sbjct: 136 LAEVPGIGVKTATRLAALGLLVVRDLVHHYPRDYLDYAH----------------LVRIA 179
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFL 330
++ G + + + + C + ++ + Q L + +FF G RF+S +L
Sbjct: 180 ALEPGRTATIVATVRRCHAFGSPRNPNLAILELQV-QDVTGRLRVTRFFAGRRFSSPGWL 238
Query: 331 KSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAK--GRPYPIYPS 388
K+ + + VG V VSG V+ + + ++VL + +R++ GR P+Y
Sbjct: 239 KAQQRLYPVGATVAVSGLVKDSPYGPCFA--DPLLEVL-EAPGAPVRSERIGRFVPVYAL 295
Query: 389 KGGLNASLLRDTIARALQA-LPANF---DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
GL+ +T+ARA+ A LPA DP+P+ + E L +A +G+H+P +E
Sbjct: 296 TEGLSG----ETLARAIAAVLPAACRWPDPLPEPLRLELALPRRGEALLGLHRPADREEL 351
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
R+RL+FDEF LQL LG + E+ R P G L +
Sbjct: 352 QRCRRRLVFDEFLLLQLA--------LGQRRER-----LRRSPAPPLLLPSGGEDLVSRF 398
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
L LP+ LT +Q ++EI D+++P PM RL+QGDVG GKTVVA A + I +G Q A
Sbjct: 399 LDLLPFPLTGAQSRVLAEIRADMERPQPMARLVQGDVGSGKTVVALAALLGAIAAGCQGA 458
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
M PTE+LA QH+ L L ++ I LLTGSTP ++ R + +DL G + L++
Sbjct: 459 LMAPTEVLAAQHFHKLAGWLPQLDVS-----IELLTGSTPARRRRQVLQDLVNGQVKLLV 513
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+L+ + V+F L L +VDEQ RFGV QR R +K
Sbjct: 514 GTHALLEDPVQFDRLGLVVVDEQHRFGVRQRNRLLAK----------------------- 550
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKG 736
+ PH+L M+ATPIPRTLAL+++GD+ L+QI +LPPGR PI+T ++ G+E+
Sbjct: 551 GLQPHLLTMTATPIPRTLALSIHGDLDLSQIDELPPGRTPIRTRLLRGSERA 602
>gi|269926755|ref|YP_003323378.1| ATP-dependent DNA helicase RecG [Thermobaculum terrenum ATCC
BAA-798]
gi|269790415|gb|ACZ42556.1| ATP-dependent DNA helicase RecG [Thermobaculum terrenum ATCC
BAA-798]
Length = 786
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 189/562 (33%), Positives = 272/562 (48%), Gaps = 90/562 (16%)
Query: 179 SLYPALPNESSTSSEVGSLPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLH 238
S++P LPN + PS + P L+K IS +PG+ +R G + +R L
Sbjct: 88 SVFP-LPN-------IRQAPSRSV--PDLEKPISSMPGVGQRRAALFGRLGIHLIRDALE 137
Query: 239 HFPRTYADLQNAQ--IDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTS 296
++PR Y D N + +L G FI ++ K + + L A + +
Sbjct: 138 YYPREYHDRSNLRKIAELQFGNTETFIAKVKEVSVRKLSNNLNLL-------TARLQDET 190
Query: 297 GDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNN 356
G F T F+ + +E G + V+GKV
Sbjct: 191 G--------------------FIDATWFSRGFVRRDLEP----GMEIIVTGKVGQFLGKL 226
Query: 357 HYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANF-DPV 415
E EY + D SL GR PIY S GLN LLR I + D +
Sbjct: 227 KVESPEY------EHLDKSLLHSGRIVPIYRSTEGLNNKLLRSVIHDIVAYHSVRIEDHL 280
Query: 416 PKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQF 475
P+ + E LL L DA IH P D+ + AR+RL FDEF +QLG L ++ +
Sbjct: 281 PQHLIDELSLLDLGDALYQIHFPDSWDQLEAARRRLAFDEFLEIQLGAL---MKQAVRRR 337
Query: 476 EKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNR 535
K L RKP++ + L LP+ LT +Q I EI+ DL+ VPMNR
Sbjct: 338 SKGALALDVRKPQIG------------EFLTNLPFRLTGAQERVIQEIMHDLESDVPMNR 385
Query: 536 LLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPK 595
LLQGDVG GKTVVA A + +GYQ A M PTE+LA QHY+ + +L+ + ED PK
Sbjct: 386 LLQGDVGSGKTVVAASALITAFANGYQGAIMAPTEILAEQHYKGISRLVSVLGED--APK 443
Query: 596 IALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQR 655
++LLTGS K+ + + ++ G+I ++IGTH+LI E V F+ L + +VDEQ RFGV QR
Sbjct: 444 VSLLTGSIKGKERDDLYQAVEQGEIDILIGTHALIQEGVRFNNLAVCVVDEQHRFGVEQR 503
Query: 656 GRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQI 715
+K + PH+L M+ATPIPR+LAL +YGD+ L+ +
Sbjct: 504 AALRAK-----------------------GVNPHLLVMTATPIPRSLALTIYGDLDLSVL 540
Query: 716 TDLPPGRIPIKTYIIEGNEKGY 737
++PPGR PI+T+ + ++ +
Sbjct: 541 DEMPPGRQPIQTFALTPEQRSW 562
>gi|409992383|ref|ZP_11275576.1| ATP-dependent DNA helicase RecG [Arthrospira platensis str. Paraca]
gi|409936740|gb|EKN78211.1| ATP-dependent DNA helicase RecG [Arthrospira platensis str. Paraca]
Length = 822
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 176/516 (34%), Positives = 268/516 (51%), Gaps = 71/516 (13%)
Query: 225 LENCGFYTLRKLLHHFPRTYADL--QNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLE 282
L G YT+ LL+++PR + D Q +L+ G+ + E+ + C S
Sbjct: 143 LARLGIYTIYDLLYYYPRDHIDYARQVPIKELEPGETVTIVAEV-----KRCNCFSS--- 194
Query: 283 VIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEF 342
+ + T + +V +GQ L + +F+ G R+++ + + + G
Sbjct: 195 ------PKNRQLTILELIVKDRTGQ-----LKISRFYAGNRYSNKGWQHKQKYNYPPGAI 243
Query: 343 VCVSGKVRAMRSNNHYEMREYN--IDVLKDEDDLSLRAK-GRPYPIYPSKGGLNASLLRD 399
+ SG V+ N Y + N +++L D + K GR P+YP G+ A L+R
Sbjct: 244 IAASGLVK----KNKYGITLDNPELEILDRADSHAASMKIGRVLPVYPLSEGIGADLVRK 299
Query: 400 TIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYL 459
+ AL A + +P ++ +++ L+ + DA IH P + D AR+RL+FDEFFYL
Sbjct: 300 AVLAALPAANKLPESLPPKLREKYQLIEISDAITNIHFPPNRDWLAAARRRLVFDEFFYL 359
Query: 460 QLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSA 519
Q+G L Q + T + LL + L ++ + LP+ LT +Q
Sbjct: 360 QIG-LLQRRQVSKTNEKSAALLPQ--------------GELIEQFYKMLPFELTKAQKRV 404
Query: 520 ISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEH 579
I EI+ DL PMNRL+QGDVG GKTVVA +A + I +GYQ A M PTE+LA QHY+
Sbjct: 405 IEEILTDLNSEEPMNRLIQGDVGAGKTVVAVVAMLAAIQAGYQTALMAPTEVLAEQHYQK 464
Query: 580 LLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSAL 639
L+ L+ M H P + LLTGST + R I LQTG++ +++GTH+LI + V F L
Sbjct: 465 LVGWLNLM----HLP-VELLTGSTKTAKRRQIHAQLQTGELPVLVGTHALIQDPVNFHKL 519
Query: 640 RLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIP 699
L ++DEQ RFGV QR + K +PHVL M+ATPIP
Sbjct: 520 GLVVIDEQHRFGVHQRAKLQQK-----------------------GESPHVLTMTATPIP 556
Query: 700 RTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
RTL+L L+GD+ ++Q+ +LPPGR PI+T ++ G ++
Sbjct: 557 RTLSLTLHGDLDVSQLDELPPGRQPIQTTMLSGRKR 592
>gi|443317403|ref|ZP_21046815.1| ATP-dependent DNA helicase RecG [Leptolyngbya sp. PCC 6406]
gi|442783010|gb|ELR92938.1| ATP-dependent DNA helicase RecG [Leptolyngbya sp. PCC 6406]
Length = 852
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 191/540 (35%), Positives = 277/540 (51%), Gaps = 67/540 (12%)
Query: 201 ASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADL--QNAQIDLDDGQ 258
+S P LD+ + + G+ + +L G T+ LLH++PR Y + Q A DL G+
Sbjct: 149 SSKPPTLDQGATYLKGVGPKNAERLAKLGLLTVLDLLHYYPRDYINYAQQVAIRDLKPGE 208
Query: 259 YFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKF 318
+G + ++ C FS + + T + V+ SGQ L L KF
Sbjct: 209 TVTLVGRV-----ERSNC-FS--------SPKNPQLTIQELVLRDSSGQ-----LRLSKF 249
Query: 319 FRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNI-DVLKDEDDLSLR 377
+ G RF ++ + + + ++ VG V SG V+ + + E + D +E D L
Sbjct: 250 WPGQRFRNVAWQQRQKKQYPVGALVAASGLVKQNKYGITLDNPELEVLDGPGEEPDSPL- 308
Query: 378 AKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQ 437
GR P+YP G+ A L+R IA AL A DP+P ++ + L+ L A IH
Sbjct: 309 -VGRIVPVYPLTEGVAAHLIRRAIATALPAALDLVDPLPADLRRTHNLVELPVAIAHIHF 367
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGW 497
P + ARKRL+FDEFFYLQLG L + ++ + +
Sbjct: 368 PDTEESLQQARKRLVFDEFFYLQLGLLRRR---------------HQQRQQQTGIVLPPT 412
Query: 498 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
L + LP+ LT +Q ++EI+ DL+ PMNRL+QGDVG GKTVVA +A + +
Sbjct: 413 GKLIDQFYTILPFELTGAQQRVVTEILTDLQAATPMNRLVQGDVGSGKTVVAVVAILAAL 472
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
+GYQAA M PTE+LA QHY L++ + M + LLTGST + R I L T
Sbjct: 473 QAGYQAALMAPTEVLAEQHYRKLVEWFNIMSL-----PVELLTGSTRAAKRRGILAQLAT 527
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
G++ L++GTH+LI + V+F AL L +DEQ RFGV QR R K
Sbjct: 528 GELPLLVGTHALIEDPVQFQALGLVAIDEQHRFGVQQRARLQRK---------------- 571
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGY 737
D+ PHVL ++ATPIPRTLAL L+GD+ ++QI +LPPGR IKT ++ G E+ +
Sbjct: 572 ---GDN----PHVLTLTATPIPRTLALTLHGDLEVSQIDELPPGRKAIKTTLLAGRERTH 624
>gi|209524184|ref|ZP_03272734.1| DEAD/DEAH box helicase domain protein [Arthrospira maxima CS-328]
gi|209495275|gb|EDZ95580.1| DEAD/DEAH box helicase domain protein [Arthrospira maxima CS-328]
Length = 670
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 179/515 (34%), Positives = 270/515 (52%), Gaps = 69/515 (13%)
Query: 225 LENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCS-FSFLEV 283
L G YT+ LL+++PR + D Q+ + + + GE ++ C+ FS
Sbjct: 143 LARLGIYTIYDLLYYYPRDHIDYAR-QVPIKE----LAPGETVTIVAQVKRCNCFS---- 193
Query: 284 IVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFV 343
+ + T + +V +GQ L + +FF G R+++ + + + G +
Sbjct: 194 ----SPKNRQLTILELMVKDATGQ-----LKISRFFAGNRYSNKGWQHKQKYNYPPGAII 244
Query: 344 CVSGKVRAMRSNNHYEMREYN--IDVLKDEDDLSLRAK-GRPYPIYPSKGGLNASLLRDT 400
SG V+ N Y + N ++VL D + K GR P+YP G+ A LLR
Sbjct: 245 AASGLVK----KNKYGITLDNPELEVLDRVDSRAASMKIGRVLPVYPLSDGIGADLLRKA 300
Query: 401 IARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQ 460
+ AL A + +P ++ +++ L+ + DA IH P + D AR+RL+FDEFFYLQ
Sbjct: 301 VLAALPAANKLPESLPPKLREKYQLIEISDAITNIHFPPNRDWLASARRRLVFDEFFYLQ 360
Query: 461 LGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAI 520
+G L Q + T + LL + L ++ + LP+ LT +Q I
Sbjct: 361 IG-LLQRRQVSKTNEKSAALLPQ--------------GELIQQFYKILPFELTKAQKRVI 405
Query: 521 SEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHL 580
EI+ DL PMNRL+QGDVG GKTVVA +A + I +GYQ A M PTE+LA QHY+ L
Sbjct: 406 GEILTDLNSEEPMNRLIQGDVGAGKTVVAVVAMLAAIQAGYQTALMAPTEVLAEQHYQKL 465
Query: 581 LKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALR 640
+ L+ M H P + LLTGST + R I LQTG++ +++GTH+LI ++V F L
Sbjct: 466 VGWLNLM----HLP-VELLTGSTKAAKRRQIHAQLQTGELPVLVGTHALIQDQVNFHKLG 520
Query: 641 LAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPR 700
L ++DEQ RFGV QR + K +PHVL M+ATPIPR
Sbjct: 521 LVVIDEQHRFGVHQRAKLQQK-----------------------GESPHVLTMTATPIPR 557
Query: 701 TLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
TL+L L+GD+ ++Q+ +LPPGR PI+T ++ G ++
Sbjct: 558 TLSLTLHGDLDVSQLDELPPGRQPIQTTMLSGRKR 592
>gi|376003599|ref|ZP_09781408.1| ATP-dependent DNA helicase [Arthrospira sp. PCC 8005]
gi|375328073|emb|CCE17161.1| ATP-dependent DNA helicase [Arthrospira sp. PCC 8005]
Length = 822
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 182/537 (33%), Positives = 279/537 (51%), Gaps = 75/537 (13%)
Query: 205 PLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIG 264
P LD+ + + G R L G YT+ LL+++PR + D Q+ + + + G
Sbjct: 125 PQLDQGLKELVG--PRNSDLLARLGIYTIYDLLYYYPRDHIDYAR-QVPIKE----LAPG 177
Query: 265 EIISSRGMKAGCS-FSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTR 323
E ++ C+ FS + + T + +V +GQ L + +FF G R
Sbjct: 178 ETVTIVAQVKRCNCFS--------SPKNRQLTILELMVKDATGQ-----LKISRFFAGNR 224
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYN--IDVLKDEDDLSLRAK-G 380
+++ + + + G + SG V+ N Y + N ++VL D + K G
Sbjct: 225 YSNKGWQHKQKYNYPPGAIIAASGLVK----KNKYGITLDNPELEVLDRVDSRAASMKIG 280
Query: 381 RPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKH 440
R P+YP G+ A L+R + AL A + +P ++ +++ L+ + DA IH P +
Sbjct: 281 RVLPVYPLSDGIGADLVRKAVLAALPAANKLPESLPPKLREKYQLIEISDAITNIHFPPN 340
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLN--AAYMEGWS 498
D AR+RL+FDEFFYLQ+G LL + + + N +A +
Sbjct: 341 RDWLASARRRLVFDEFFYLQIG-----------------LLQRRQVSKTNEKSAALLPQG 383
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
L ++ + LP+ LT +Q I EI+ DL PMNRL+QGDVG GKTVVA +A + I
Sbjct: 384 ELIQQFYKILPFELTKAQKRVIGEILTDLNSEEPMNRLIQGDVGAGKTVVAVVAMLAAIQ 443
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+GYQ A M PTE+LA QHY+ L+ L+ M H P + LLTGST + R I LQTG
Sbjct: 444 AGYQTALMAPTEVLAEQHYQKLVGWLNLM----HLP-VELLTGSTKAAKRRQIHAQLQTG 498
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
++ +++GTH+LI ++V F L L ++DEQ RFGV QR + K
Sbjct: 499 ELPVLVGTHALIQDQVNFHKLGLVVIDEQHRFGVQQRAKLQQK----------------- 541
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
+PHVL M+ATPIPRTL+L L+GD+ ++Q+ +LPPGR PI+T ++ G ++
Sbjct: 542 ------GESPHVLTMTATPIPRTLSLTLHGDLDVSQLDELPPGRQPIQTTMLSGRKR 592
>gi|123968352|ref|YP_001009210.1| ATP-dependent DNA helicase RecG [Prochlorococcus marinus str.
AS9601]
gi|123198462|gb|ABM70103.1| ATP-dependent DNA helicase recG [Prochlorococcus marinus str.
AS9601]
Length = 815
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 178/558 (31%), Positives = 278/558 (49%), Gaps = 75/558 (13%)
Query: 189 STSSEVGSLPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQ 248
S+++ V ++AS+ +D IS + + K ++L G + ++ L+++FPRTY D
Sbjct: 104 SSNNNVFLDKADASLS--IDSDISLIKNVGKVYKNKLNELGIFHIKDLINYFPRTYLDYT 161
Query: 249 N--AQIDLDDGQYFIFIGEI--ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNID 304
N I+L + I + K + S + ++V E + + T
Sbjct: 162 NRVKIINLKPDNLYTCIANVKRFYIHKSKKNSNLSIMNIVVFDETSSIKVT--------- 212
Query: 305 SGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYN 364
KFF G RF S F S + + G + +SGKV+ + +
Sbjct: 213 ------------KFFLGKRFRSYSFFTSQKSLYTPGTKLAISGKVKLTEYGKTF--VDPQ 258
Query: 365 IDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFG 424
I++LKD +D + G+ P+Y L+ + + L + + K+
Sbjct: 259 IEILKDNND-NFNFSGKILPLYSLGEALSNMSFIKLMKKVLIYAKQYPEILNKKQLDSLS 317
Query: 425 LLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKY 484
LL ++ + IH P ++KRL+FDE F LQ+ L L +
Sbjct: 318 LLSKGESLINIHFPPTQQALIESKKRLVFDELFLLQIKFL---------------LRKRK 362
Query: 485 RKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCG 544
K +N + SL K+ L P+ LT SQ + ++EI DL PVPM+RLLQGDVG G
Sbjct: 363 TKKNVNPQQLPQKKSLLKEFLDTFPFELTKSQENVLNEIKKDLSNPVPMSRLLQGDVGSG 422
Query: 545 KTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTP 604
KT++A + + VI Q A MVPTE+LA QHY++LLK L+ + + LLTG+TP
Sbjct: 423 KTIIAIASLLLVIEKNLQGAIMVPTEVLAEQHYKNLLKYLNPLF-----VSVELLTGNTP 477
Query: 605 VKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYY 664
K+ + I +L G + +++GTH+L +KV F+AL + ++DEQ RFGV QR R +K
Sbjct: 478 QKKRKEIFSNLNNGLVDILVGTHALFEDKVIFNALGMVVIDEQHRFGVTQRNRLLNKGEN 537
Query: 665 TSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIP 724
T++ L+M+ATPIPRTLAL++YGD+ ++QIT+LPPGR+P
Sbjct: 538 TNL-----------------------LSMTATPIPRTLALSIYGDLDVSQITELPPGRVP 574
Query: 725 IKTYIIEGNEKGYENVYK 742
I T II +E N++K
Sbjct: 575 ITTKII--SEDDLTNLFK 590
>gi|22298277|ref|NP_681524.1| ATP-dependent DNA helicase RecG [Thermosynechococcus elongatus
BP-1]
gi|22294456|dbj|BAC08286.1| DNA recombinase [Thermosynechococcus elongatus BP-1]
Length = 804
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 176/520 (33%), Positives = 263/520 (50%), Gaps = 64/520 (12%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
+ CV G R QL G YT+ L+++FPR + D + R
Sbjct: 114 LRCVVG--DRTAAQLAKLGLYTVADLIYYFPRDHIDYARQ----------------VPIR 155
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFL 330
++AG + + + + C+ + + ++ I Q + + L +F+ G R+ +
Sbjct: 156 QLQAGETVTLVGQVRRCKCFTSPRNAKLTILEIIL-QDRTGQIRLTRFYAGARYAQRGWQ 214
Query: 331 KSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKG 390
+ + + V SG V+ + E E + + SL GR PIYP
Sbjct: 215 EQQKRLYAPQTLVAASGLVKQTKYGLTLEEPELEVLEHPGAEIDSL-TIGRIVPIYPLTE 273
Query: 391 GLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKR 450
G++ ++R +AR L + DP+P+ + Q L+ L A IH P + LAR+R
Sbjct: 274 GVSPDVIRRAVARVLPLVQGYPDPLPQALCQHHQLIPLDTALRYIHFPPDQTQLSLARRR 333
Query: 451 LIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPY 510
LIFDEFFYL L L + +++ + KP+ L ++ + LP+
Sbjct: 334 LIFDEFFYL-------QLGLLQRRRQQQQQVSVPLKPQ---------GELIEQFYQRLPF 377
Query: 511 SLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTE 570
LT +Q ++EI+ DL++P+PMNRLLQGDVG GKTVVA +A + + SGYQ A M PTE
Sbjct: 378 QLTGAQQRVVAEILADLERPIPMNRLLQGDVGSGKTVVAVIALLAAVQSGYQGALMAPTE 437
Query: 571 LLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLI 630
+LA QHY L + L + H P + LLTGS + R I L TG++ +++GTH+LI
Sbjct: 438 VLAEQHYRKLFEWLTPL----HVP-VELLTGSVRTAKRRQILDQLATGELPVLVGTHALI 492
Query: 631 AEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHV 690
E V F L L ++DEQ RFGV QR + +K + PHV
Sbjct: 493 QEGVRFQRLGLVVIDEQHRFGVAQRAKLQAK-----------------------GVLPHV 529
Query: 691 LAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
L M+ATPIPRTLAL L+GD+ ++QI +LPPGR PI+T I+
Sbjct: 530 LTMTATPIPRTLALTLHGDLEVSQIDELPPGRRPIQTTIL 569
>gi|443313612|ref|ZP_21043223.1| ATP-dependent DNA helicase RecG [Synechocystis sp. PCC 7509]
gi|442776555|gb|ELR86837.1| ATP-dependent DNA helicase RecG [Synechocystis sp. PCC 7509]
Length = 822
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 182/544 (33%), Positives = 273/544 (50%), Gaps = 77/544 (14%)
Query: 205 PLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADL--QNAQIDLDDGQYFIF 262
P LD+ ++ +P + R L G T+R +L ++PR + D Q +L++G+
Sbjct: 123 PTLDQSLTSLPEVGARKASYLTRLGLNTVRDVLFYYPRDHIDYARQVNIRELEEGETVTI 182
Query: 263 IGEI--ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFR 320
+G + S + LEVI+ ++GQ K L +FF
Sbjct: 183 VGRVHRCSCFNSPRNPKLTILEVIL----------------KDNTGQIK-----LNRFFA 221
Query: 321 GTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHY--EMREYNIDVLKDEDD-LSLR 377
G+R+++ + + + + V V SG V+ N Y + + ++VL D +
Sbjct: 222 GSRYSNRGWQEQQKRHYPVEATVAASGLVK----KNKYGVTLDDLELEVLASPGDGIDSL 277
Query: 378 AKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQ 437
GR PIY G++A ++R + AL + DP+P + + + L L +A IH
Sbjct: 278 TIGRVVPIYALTEGVSADMVRQAVIAALPSASLLKDPLPAALRKHYELDKLSNAIANIHF 337
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGW 497
P +AR+RL+FDEFFYLQLG L + + Q +A +
Sbjct: 338 PADDTALAVARRRLVFDEFFYLQLGLLQRQYKAKQIQ---------------TSAIIART 382
Query: 498 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
L ++ LP+ +T +Q I++++ DL++ PMNRL+QGDVG GKTVVA +A + I
Sbjct: 383 GQLIEQFYEVLPFKMTGAQSRVINDVLNDLQKSSPMNRLIQGDVGSGKTVVAVVAILAAI 442
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
SGYQAA M PTE+LA QHY L+ L+ + H P + LLTGST + R I L+T
Sbjct: 443 QSGYQAALMAPTEVLAEQHYRKLVSWLNLL----HLP-VELLTGSTKAAKRRQIHAQLET 497
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
++ L++GTH+LI + V F L L ++DEQ RFGV QR K
Sbjct: 498 AELPLLVGTHALIQDPVNFQRLGLVVIDEQHRFGVGQRAALQQK---------------- 541
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGY 737
APHVL M+ATPIPR+LAL L+GD+ ++QI +LPPGR I T + G E+
Sbjct: 542 -------GEAPHVLTMTATPIPRSLALTLHGDLDVSQIDELPPGRQKIHTTALTGKERA- 593
Query: 738 ENVY 741
N Y
Sbjct: 594 -NAY 596
>gi|254423977|ref|ZP_05037695.1| ATP-dependent DNA helicase RecG [Synechococcus sp. PCC 7335]
gi|196191466|gb|EDX86430.1| ATP-dependent DNA helicase RecG [Synechococcus sp. PCC 7335]
Length = 872
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 173/532 (32%), Positives = 267/532 (50%), Gaps = 67/532 (12%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
LDK ++ + G+ +L G +LR +L ++PR Y D Q+ + D
Sbjct: 171 LDKPLTYLRGIGAHKAEKLAKLGLLSLRDVLFYYPRDYIDYAR-QVKIKD---------- 219
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNI---DSGQKKKIYLHLKKFFRGTR 323
+ G + + + + C ++ S + + D+ + KI +F GT
Sbjct: 220 -----LVPGETVTLVATVKKCSCFNSPRNSKLTIFEMTVYDATSRLKI----SRFLAGTH 270
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY 383
F S + + + + G V +SG V+ + + + E + DE SL GR
Sbjct: 271 FRSRGWQERQKRLYPPGAVVAISGLVKQTKYGINIDSPEIEVLGGPDEAIASLTV-GRVV 329
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
P+YP G+ A ++R + AL A+ DP+P + Q++ L+ L A IH P +
Sbjct: 330 PVYPLTEGVGADIVRKAVVAALPAVVELRDPLPSALRQKYELVELAAAIAHIHFPPSTEA 389
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
+AR+RL+FDEFFYLQLG L + Q + + L +
Sbjct: 390 LAVARRRLVFDEFFYLQLGLLRRRAAQQQAQ---------------TSVQVAPTGQLIEA 434
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
+ LP+ T++Q EI+ DL++ PMNRL+QGDVG GKTVVA + + I +GYQA
Sbjct: 435 FYKVLPFQFTNAQQRVAQEILNDLQKTAPMNRLVQGDVGSGKTVVAVVGILAAIQAGYQA 494
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A M PTE+LA QHY L++ + + H P + LLTGST + R I +L TG++ ++
Sbjct: 495 ALMAPTEVLAEQHYRKLVEWFNLL----HLP-VELLTGSTRAAKRRQIHSELLTGELPVL 549
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GTH+LI + V+F L L +DEQ RFGV QR + K D+
Sbjct: 550 VGTHALIEDPVQFHNLGLVTIDEQHRFGVAQRAKLQQK-------------------GDN 590
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
PHVL ++ATPIPRTLAL ++GD+ ++QI +LPPGR +KT ++ E+
Sbjct: 591 ----PHVLTLTATPIPRTLALTIHGDLDVSQIDELPPGRKAVKTTVLGAKER 638
>gi|291571510|dbj|BAI93782.1| ATP-dependent DNA helicase RecG [Arthrospira platensis NIES-39]
Length = 822
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 176/516 (34%), Positives = 267/516 (51%), Gaps = 71/516 (13%)
Query: 225 LENCGFYTLRKLLHHFPRTYADL--QNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLE 282
L G YT+ LL+++PR + D Q +L+ G+ + E+ + C S
Sbjct: 143 LARLGIYTIYDLLYYYPRDHIDYARQVPIKELEPGETVTIVAEV-----KRCNCFSS--- 194
Query: 283 VIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEF 342
+ T + +V +GQ L + +F+ G R+++ + + + G
Sbjct: 195 ------PKNRHLTILELIVKDRTGQ-----LKISRFYAGNRYSNKGWQHKQKYNYPPGAI 243
Query: 343 VCVSGKVRAMRSNNHYEMREYN--IDVLKDEDDLSLRAK-GRPYPIYPSKGGLNASLLRD 399
+ SG V+ N Y + N +++L D + K GR P+YP G+ A L+R
Sbjct: 244 IAASGLVK----KNKYGITLDNPELEILDRADSHAASMKIGRVLPVYPLSEGIGADLVRK 299
Query: 400 TIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYL 459
+ AL A + +P ++ +++ L+ + DA IH P + D AR+RL+FDEFFYL
Sbjct: 300 AVLAALPAANKLPESLPPKLREKYQLIEISDAITNIHFPPNRDWLASARRRLVFDEFFYL 359
Query: 460 QLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSA 519
Q+G L Q + T + LL + L ++ + LP+ LT +Q
Sbjct: 360 QIG-LLQRRQVSKTNEKSAALLPQ--------------GELIEQFYKMLPFELTKAQKRV 404
Query: 520 ISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEH 579
I EI+ DL PMNRL+QGDVG GKTVVA +A + I +GYQ A M PTE+LA QHY+
Sbjct: 405 IGEILTDLNSEEPMNRLIQGDVGAGKTVVAVVAMLAAIQAGYQTALMAPTEVLAEQHYQK 464
Query: 580 LLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSAL 639
L+ L+ M H P + LLTGST + R I LQTG++ +++GTH+LI + V F L
Sbjct: 465 LVGWLNLM----HLP-VELLTGSTKTAKRRQIHAQLQTGELPVLVGTHALIQDPVNFHKL 519
Query: 640 RLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIP 699
L ++DEQ RFGV QR + K +PHVL M+ATPIP
Sbjct: 520 GLVVIDEQHRFGVHQRAKLQQK-----------------------GESPHVLTMTATPIP 556
Query: 700 RTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
RTL+L L+GD+ ++Q+ +LPPGR PI+T ++ G ++
Sbjct: 557 RTLSLTLHGDLDVSQLDELPPGRQPIQTTMLSGRKR 592
>gi|126696154|ref|YP_001091040.1| ATP-dependent DNA helicase RecG [Prochlorococcus marinus str. MIT
9301]
gi|126543197|gb|ABO17439.1| ATP-dependent DNA helicase recG [Prochlorococcus marinus str. MIT
9301]
Length = 818
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 173/540 (32%), Positives = 267/540 (49%), Gaps = 73/540 (13%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN--AQIDLDDGQYFIFIG 264
D IS + + K ++L G + ++ L+++FPRTY D N I+L + I
Sbjct: 123 FDSDISLIKNVGKVYKNKLNELGIFHIKDLINYFPRTYLDYTNRVKIINLKPDNLYTCIA 182
Query: 265 EI--ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGT 322
+ K + S + ++V E + + T KFF G
Sbjct: 183 NVKRFYIHKSKKNSNLSIMNIVVYDETSSIKVT---------------------KFFLGR 221
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
RF S F S + + G + +SGKV+ + + I++LKD +D + G+
Sbjct: 222 RFRSYSFFTSQKSLYTAGTKLAISGKVKLTEYGKTF--VDPQIEILKDNND-NYNFSGKI 278
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHID 442
P+Y L+ + + L + + K+ LL ++ + IH P
Sbjct: 279 LPLYSLGEALSNMSFIKLMKKVLIYAKQYPEILNKKQLDSLSLLSKGESLINIHFPPTQQ 338
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
++KRL+FDE F LQ+ L L + + + + SL K
Sbjct: 339 ALIESKKRLVFDELFLLQIKFL---------------LRKRKTNKNVTSQQLPQKKSLLK 383
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
+ L P+ LT SQ + ++EI DL PVPM+RLLQGDVG GKT++A + + VI Q
Sbjct: 384 EFLNNFPFELTKSQENVLNEIKKDLSNPVPMSRLLQGDVGSGKTIIAIASLLLVIEKNLQ 443
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
AFMVPTE+LA QHY++LLK L+ + + LLTG+TP K+ + I +L G + +
Sbjct: 444 GAFMVPTEVLAEQHYKNLLKYLNPL-----LVSVELLTGNTPQKKRKEIFSNLNNGLVDI 498
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
++GTH+L +KV F+AL + ++DEQ RFGV QR R +K D +
Sbjct: 499 LVGTHALFEDKVIFNALGMVVIDEQHRFGVTQRNRLLNK--------------GDNT--- 541
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYK 742
++L+M+ATPIPRTLAL++YGD+ ++QIT+LPPGR+PI T II E N++K
Sbjct: 542 ------NLLSMTATPIPRTLALSIYGDLDVSQITELPPGRVPITTKIIS--EDNLTNLFK 593
>gi|124025499|ref|YP_001014615.1| ATP-dependent DNA helicase recG [Prochlorococcus marinus str.
NATL1A]
gi|123960567|gb|ABM75350.1| ATP-dependent DNA helicase recG [Prochlorococcus marinus str.
NATL1A]
Length = 846
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 179/536 (33%), Positives = 266/536 (49%), Gaps = 69/536 (12%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ-ID-LDDGQYFIFIG 264
L IS V G+ + +L G +R L+++FPR Y D + + ID GQ +
Sbjct: 147 LQSTISSVKGVGSKQAERLSTLGLILIRDLINYFPRDYVDYSSLKTIDKTQAGQNVTIVA 206
Query: 265 EIISSRGMKA--GCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGT 322
++ K+ + S LE+ + + T G + + +FF G
Sbjct: 207 KVRRCSSFKSPKNPNLSILELFI------KDKTGG---------------MKITRFFAGR 245
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDD-LSLRAKGR 381
R +SI ++KS + + VG V VSG V+ S + + I+++ + L R G+
Sbjct: 246 RSSSIAYVKSQQSLYPVGATVAVSGLVK--ESKYGKSLNDPLIEIIDSPNGYLKSRTIGQ 303
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
P+Y G+ A RD I L DP+PKE L +A+ IH P +
Sbjct: 304 ILPVYSLTEGITADKFRDLIQSILYLTSNIKDPLPKETLNRLDLPYRKEAFFHIHNPANS 363
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
A++R++FDEF LQL L + K P+L+ +SL
Sbjct: 364 KTLAKAKRRIVFDEFLLLQLSLLLRRDLH-----------KKSDSPQLSIE--PNINSLV 410
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
K L LP+SLT++Q + EI D+ + PM+RLLQGDVG GKTV+A A + + SG+
Sbjct: 411 GKFLSILPFSLTNAQRRVLKEIESDIVKAEPMSRLLQGDVGSGKTVIAISALLTAVQSGW 470
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q AFM PTE+LA+QH++ L K + +E + + LLTGSTP + + I DL G
Sbjct: 471 QGAFMAPTEVLASQHFQTLSKWIPQLEIN-----VDLLTGSTPKSRRKQILTDLVNGSTK 525
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+++GTH+L + V F L L +VDEQ RFGV QR + +K
Sbjct: 526 ILVGTHALFEDPVVFERLGLVVVDEQHRFGVKQRNKLLNK-------------------- 565
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGY 737
+ PH+L M+ATPIPRTLAL L+GD+ ++Q+ +LPPGR PI T +I +K Y
Sbjct: 566 ---GLQPHLLTMTATPIPRTLALTLHGDLDVSQLDELPPGRTPINTQLISPKDKKY 618
>gi|254431018|ref|ZP_05044721.1| ATP-dependent DNA helicase RecG [Cyanobium sp. PCC 7001]
gi|197625471|gb|EDY38030.1| ATP-dependent DNA helicase RecG [Cyanobium sp. PCC 7001]
Length = 807
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 179/559 (32%), Positives = 278/559 (49%), Gaps = 68/559 (12%)
Query: 188 SSTSSEVGSLPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADL 247
+S + G L + +++P + + + G+ R +L G + +R L+H++PR Y D
Sbjct: 92 ASPAQAAGGLATRGALDP--EAPLGTIRGVGPRTAARLAQLGLFVVRDLVHYYPRDYLDY 149
Query: 248 QNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQ 307
+ + G++ G + + + + C+ + ++ +
Sbjct: 150 AHR----------------VRIAGLEVGRTATIVATVRRCQAFTSPRNPNLGILELQLSD 193
Query: 308 KKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDV 367
L + +FF G RF S +LK+ + ++ G V VSG V+ ++ + I+V
Sbjct: 194 PTG-RLRVSRFFAGRRFASPAWLKAQQRQYPPGASVAVSGLVKETPYGPAFQ--DPLIEV 250
Query: 368 LKDEDDLSLRAK--GRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGL 425
L + ++R+ GR P+Y GL A LR IA L + DP+P+ + GL
Sbjct: 251 L-ESPQATVRSPVIGRLLPVYGLTEGLGADRLRQAIAAVLPQVRQWDDPLPQALRHAHGL 309
Query: 426 LCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYR 485
+ +A IH P ++ R RL+FDEF LQLG L + E L +
Sbjct: 310 VGRAEALEQIHAPADQEQLQAGRHRLVFDEFLLLQLGLLQRRRE-----------LTRSP 358
Query: 486 KPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGK 545
P L + + SL + L LP+ LT +Q I+EI DL + PM RL+QGDVG GK
Sbjct: 359 SPPLQSPVHD---SLMARFLELLPFQLTPAQQRVIAEIRADLAREQPMARLVQGDVGSGK 415
Query: 546 TVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPV 605
TVVA A + I +G Q A M PTE+LA QHY+ L L + ALLTGSTP
Sbjct: 416 TVVAIAALLTAIDAGCQGALMAPTEVLAEQHYQKLCAWLPQLHV-----SCALLTGSTPA 470
Query: 606 KQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYT 665
++ R + +DL G + +++GTH+L+ + V F+ L L +VDEQ RFGV QR R +K
Sbjct: 471 RRRRRLLEDLANGQLQMLVGTHALLEDPVAFARLGLVVVDEQHRFGVAQRDRLLAK---- 526
Query: 666 SMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
+ PH+L M+ATPIPRTLAL+++GD+ ++QI LPPGR PI
Sbjct: 527 -------------------GLQPHLLTMTATPIPRTLALSVHGDLDVSQIDGLPPGRTPI 567
Query: 726 KTYIIEGNEK--GYENVYK 742
+T ++ E+ Y+ + K
Sbjct: 568 QTRLLRAGERDEAYQLIRK 586
>gi|427707604|ref|YP_007049981.1| ATP-dependent DNA helicase RecG [Nostoc sp. PCC 7107]
gi|427360109|gb|AFY42831.1| ATP-dependent DNA helicase RecG [Nostoc sp. PCC 7107]
Length = 824
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 184/563 (32%), Positives = 286/563 (50%), Gaps = 77/563 (13%)
Query: 181 YPA-LPNESSTSSEVGSLPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHH 239
YP+ +P + +EV + P +D+ +S +P + R +L YT+R LL +
Sbjct: 105 YPSKIPKSTPVVNEVSR-----RLAPKIDQKLSDLPEIGIRKADKLAALQLYTVRDLLFY 159
Query: 240 FPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDE 299
+PR + D ++ R ++AG + + + + C +
Sbjct: 160 YPRDHIDYARQ----------------VNIRELQAGETVTIVASVKRCNCFTSPKNQKLS 203
Query: 300 VVNI----DSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSN 355
++ + ++GQ K + +F G RFTS + +S++ ++ VG + G V+ S
Sbjct: 204 ILELVLKDNTGQIK-----IGRFSAGARFTSRAWQESLKRRYPVGSVIAACGLVK--ESK 256
Query: 356 NHYEMREYNIDVLKDE-DDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDP 414
+ ++VL + D + GR PIY G+ A+++R + L A+ + DP
Sbjct: 257 YGLTLDNPELEVLANPGDSIESLTIGRVVPIYALTEGVMANMVRQAVTAVLPAVTSLKDP 316
Query: 415 VPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQ 474
+PK + +++ L+ L DA IH P D AR+RL+FDEFFYLQLG L + + Q
Sbjct: 317 LPKGLREKYDLMELKDAIANIHFPIDSDTLQSARRRLVFDEFFYLQLGLLQRQQQAKAIQ 376
Query: 475 FEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMN 534
+A + L +K LP+ LT +Q +++I+ DL++ PMN
Sbjct: 377 ---------------TSAILAPKGQLIEKFSEILPFQLTGAQQRVLNDILNDLQKTTPMN 421
Query: 535 RLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKP 594
RL+QGDVG GKTVVA +A + I SGYQAA M PTE+LA QHY L+ + + H P
Sbjct: 422 RLVQGDVGSGKTVVAVVAILAAIQSGYQAALMAPTEVLAEQHYRKLVSWFNLL----HLP 477
Query: 595 KIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQ 654
+ LLTGST + R I L TG + L++GTH+LI + V F L L ++DEQ RFGV Q
Sbjct: 478 -VELLTGSTKTAKRREIHSLLATGQLPLLVGTHALIQDPVNFYRLGLVVIDEQHRFGVKQ 536
Query: 655 RGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQ 714
R A++ G PHVL M+ATPIPRTLAL ++GD+ ++Q
Sbjct: 537 R----------------ALLQQKGE-------QPHVLTMTATPIPRTLALTIHGDLDVSQ 573
Query: 715 ITDLPPGRIPIKTYIIEGNEKGY 737
I +LPPGR I+T + ++ +
Sbjct: 574 IDELPPGRQKIQTTALTSQQRSH 596
>gi|434405173|ref|YP_007148058.1| ATP-dependent DNA helicase RecG [Cylindrospermum stagnale PCC 7417]
gi|428259428|gb|AFZ25378.1| ATP-dependent DNA helicase RecG [Cylindrospermum stagnale PCC 7417]
Length = 825
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 179/538 (33%), Positives = 279/538 (51%), Gaps = 71/538 (13%)
Query: 203 IEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIF 262
+ P +D+ IS +P + + L G T+R LL ++PR + D
Sbjct: 124 LAPKIDQKISELPEIGIKKAENLARLGLSTVRDLLFYYPRDHIDYARQ------------ 171
Query: 263 IGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNI----DSGQKKKIYLHLKKF 318
++ R ++ G + + + + C + ++ + ++G+ K + +F
Sbjct: 172 ----VNIRELQGGETVTIIATVKRCNFFTSPKNKKLSILELILKDNTGEIK-----VGRF 222
Query: 319 FRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDD-LSLR 377
+ G RF+S + +S++ ++ VG V G V+ S + ++VL + D +
Sbjct: 223 YAGARFSSRGWQESLKRRYPVGSVVAACGLVKG--SKYGLTLDNPELEVLANPGDPIDSL 280
Query: 378 AKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQ 437
GR PIY G+ A+++R + AL A DP+P + +++GL+ L +A IH
Sbjct: 281 TIGRVVPIYALTEGVMANMVRQAVIAALPAAAQMKDPLPSGLREKYGLMELKNAIANIHF 340
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGW 497
P+ D +AR+RL+FDEFFYLQLG L + + Q +A +
Sbjct: 341 PEDSDTLKVARRRLVFDEFFYLQLGLLQRQQQARQIQ---------------TSAILAPK 385
Query: 498 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
L +K LP+ LT +Q I++I+ DL++ PMNRL+QGDVG GKTVVA +A + I
Sbjct: 386 GQLLEKFNEILPFQLTGAQQRVINDILNDLQKSTPMNRLVQGDVGSGKTVVAVVAILAAI 445
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
SGYQAA M PTE+LA QHY L+ + + H P + LLTGST V + R I L+T
Sbjct: 446 QSGYQAALMAPTEVLAEQHYRKLVSWFNLL----HLP-VELLTGSTKVVKRRQIHSQLET 500
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
G++ L++GTH+LI + V F L L ++DEQ RFGV QR + K
Sbjct: 501 GELPLLVGTHALIQDPVNFQQLGLVVIDEQHRFGVQQRAKLQQK---------------- 544
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
PHVL M+ATPIPRTLAL ++GD+ ++QI +LPPGR I+T ++ G ++
Sbjct: 545 -------GEQPHVLTMTATPIPRTLALTVHGDLDVSQIDELPPGRQKIQTTVLSGQQR 595
>gi|113474931|ref|YP_720992.1| ATP-dependent DNA helicase RecG [Trichodesmium erythraeum IMS101]
gi|110165979|gb|ABG50519.1| ATP-dependent DNA helicase RecG [Trichodesmium erythraeum IMS101]
Length = 827
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 182/532 (34%), Positives = 276/532 (51%), Gaps = 67/532 (12%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADL--QNAQIDLDDGQYFIFIG 264
L++ + V + + +L G T+R LL+++PR + D Q +L+ G+ IG
Sbjct: 130 LEQLLKDVKSIGIKNSDRLSTLGLSTVRDLLYYYPRDHIDYARQVNIRNLEAGETVTIIG 189
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
+I F+ ++ E T D +GQ K + +FF G RF
Sbjct: 190 KI---------KRFNCFSSPKNKKLTILELTLTD-----STGQIK-----ISRFFAGPRF 230
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDE-DDLSLRAKGRPY 383
++ + + + VG V SG V+ + + + E I+VL E ++ GR
Sbjct: 231 SNKGWQMMQKKFYPVGATVAASGLVKETKYGKNLDNPE--IEVLDSEGSEIESIKIGRLV 288
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
P+YP G+ A ++R I + L + +P+ ++ L+ L +A IH P D
Sbjct: 289 PVYPLTEGVEADVVRRAIFKILPKAENFSETLPEIFLNQYQLIDLKNAIKNIHFPIDRDC 348
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
AR+RL+FDEFFYLQLG L + Q +K K + A + L KK
Sbjct: 349 LAAARRRLVFDEFFYLQLGLLKR------RQLQK--------KTEIGVA-LPVTGKLIKK 393
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
+ LP+ LT++Q ++EI+ DL++P PM RL+QGDVG GKTVVA +A + + GYQA
Sbjct: 394 FYKLLPFQLTNAQKRVVNEILRDLQKPEPMKRLVQGDVGAGKTVVAVVAILAAVQVGYQA 453
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A M PTE+LA QHY+ L+ + + H P + LLTGST + + R I L+TG++ ++
Sbjct: 454 ALMAPTEVLAEQHYDKLVTWFNLL----HLP-VELLTGSTKIAKRREIYSQLETGELPIL 508
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GTH+LI + V F L L ++DEQ RFGV QR + K
Sbjct: 509 VGTHALIQDTVNFHKLGLVVIDEQHRFGVHQRAKLQQK---------------------- 546
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
+PH LAM+ATPIPRTLAL L+GD+ ++QI +LPPGR PI+T + G ++
Sbjct: 547 -GESPHFLAMTATPIPRTLALTLHGDLDVSQIDELPPGRQPIQTTNLTGRQR 597
>gi|148657621|ref|YP_001277826.1| ATP-dependent DNA helicase RecG [Roseiflexus sp. RS-1]
gi|148569731|gb|ABQ91876.1| ATP-dependent DNA helicase RecG [Roseiflexus sp. RS-1]
Length = 842
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 199/634 (31%), Positives = 300/634 (47%), Gaps = 128/634 (20%)
Query: 162 MDAELRVDRFGLS-EAWPSLYPALPNESSTSSEVGSLPSEA-----------SIEPLL-D 208
+D R R G++ E SL+ A P S+++ ++P+ A S PL D
Sbjct: 64 LDQPTRRARVGIALENLRSLFRAQPTSHSSAAPKVTMPTRAPVRRPSRPAPASARPLTPD 123
Query: 209 KCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFIGEI 266
+ VPG+++ + G T+R LL+HFP Y D + + +L G + E+
Sbjct: 124 SPLEDVPGITRIMAQSFRRLGVRTVRDLLYHFPHRYDDFTSHRTIAELQPGAVETIVAEV 183
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
+ +R + + L+V+VG E +G K ++ ++ + RFT
Sbjct: 184 LDARTVPMKSGGTRLDVLVGDE----------------TGTLKVVFF--RQPWLAQRFT- 224
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
VG V +SGK+ + +M D+D + + GR P++
Sbjct: 225 ------------VGTKVVLSGKIGIY--DGLRQMASPEWQPFTDDDLIHV---GRLVPVH 267
Query: 387 PSKGGLNASLLRDTIARAL-QALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
P GL R I + + P D +P + + GL+ L A IH P+ + +
Sbjct: 268 PLTRGLVERSARTLIKHVVDRCAPMLEDHLPPAVLERTGLMPLSQAIAQIHFPESHEMLE 327
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLL 505
AR+RL FDEF ++QLG L + + Q Y R + + + L
Sbjct: 328 RARRRLGFDEFLFIQLGVLQRRVIWQAQQ--------GYAITRRDDVH--------EAFL 371
Query: 506 RALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAF 565
R LP+ LT +Q+ A+ EI D+++PVPM RLLQGDVG GKTVVA A ++VI +G+QAA
Sbjct: 372 RQLPFELTGAQVRALEEIFADMERPVPMARLLQGDVGSGKTVVAAAAALQVIAAGFQAAI 431
Query: 566 MVPTELLATQHYEHLLKLLDNM---EEDKHKP---------------------------- 594
M PTE+LA QHY L LL + +D+H P
Sbjct: 432 MAPTEILAEQHYRSLRSLLGKVPVPRDDRHAPMDDLDPEQRERLEEIRRILGMSGDDDLD 491
Query: 595 ----KIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRF 650
++ALLTGS K+ R + + + GDI L++GTH+LI+E V+++AL LA++DEQ RF
Sbjct: 492 GRGVRVALLTGSLGAKERRRVLEGIARGDIDLIVGTHALISEGVQYAALGLAVIDEQHRF 551
Query: 651 GVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDM 710
GV QR R K Y PH+L M+ATPIPRTL L +YGD+
Sbjct: 552 GVEQRQRLKDKGYN-----------------------PHMLVMTATPIPRTLTLTIYGDL 588
Query: 711 SLTQITDLPPGRIPIKTYIIEG--NEKGYENVYK 742
++ + +LPPGR IKT I EK Y ++ +
Sbjct: 589 DVSILDELPPGRQEIKTRWITTVEREKAYRHIRR 622
>gi|300863472|ref|ZP_07108427.1| ATP-dependent DNA helicase recG [Oscillatoria sp. PCC 6506]
gi|300338535|emb|CBN53569.1| ATP-dependent DNA helicase recG [Oscillatoria sp. PCC 6506]
Length = 694
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 180/535 (33%), Positives = 267/535 (49%), Gaps = 72/535 (13%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
I +P LS+ LE G ++ LL +FPR Y + +I
Sbjct: 7 IHALPALSRNNCRLLEKLGITSILDLLLYFPRDYIKYRRVKIA----------------- 49
Query: 271 GMKAGCSFSFLEVIVGCEI----ADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
G++ G S + + I EI + T +V +G + K+FF T + S
Sbjct: 50 GLQIGDSVTIVGKIKKHEIISPPKNPRLTIQTLIVKDKTGN-----IACKRFFNHTYYQS 104
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
+ + G V VSG V+A R +Y M + ++ + D K PIY
Sbjct: 105 QQWRNEQNLMYVNGSIVTVSGVVKADR---YYGMILTSPEIQLIDLDQVRDTKNSIIPIY 161
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL 446
P G++ ++++ ++ AL+ DP+P+ + ++ GL+ L A IHQP + +
Sbjct: 162 PLTKGVSNEIVQEAVSSALEMTELLIDPLPQHLRRKCGLMELQVAIANIHQPPDEPQLEA 221
Query: 447 ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLR 506
AR+RL+FDEFFYLQL L + + L R + S L ++
Sbjct: 222 ARRRLVFDEFFYLQLSFLVRRRQLLA---------------RSAITKITPTSPLVEQFYS 266
Query: 507 ALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFM 566
LP+SLT +Q I++I+ D+ PMNRL+QGDVG GKTVVA +A + I SGYQAA M
Sbjct: 267 QLPFSLTLAQRQVINDILNDMTAKTPMNRLVQGDVGSGKTVVAVVAILVAIQSGYQAALM 326
Query: 567 VPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGT 626
PTE+LA QHY + + + + LLTGST + R I L+TG+++L++GT
Sbjct: 327 APTEVLAEQHYRKIATWFEPL-----GVSVQLLTGSTKTAKRREIHAQLETGELSLLVGT 381
Query: 627 HSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHM 686
H+L+ EKV F+ L L ++DEQ RFGV QR +K G+
Sbjct: 382 HALLQEKVNFNQLGLVVIDEQHRFGVQQRQNLLNK----------------GN------- 418
Query: 687 APHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVY 741
PHVL M+ATPIPRTLAL L+GD+ ++QI +LPPGR I T +I Y+ ++
Sbjct: 419 RPHVLTMTATPIPRTLALTLHGDLDVSQIDELPPGRQKIHTKVINKGAPAYDFIH 473
>gi|119487921|ref|ZP_01621418.1| ATP-dependent DNA helicase RecG [Lyngbya sp. PCC 8106]
gi|119455497|gb|EAW36635.1| ATP-dependent DNA helicase RecG [Lyngbya sp. PCC 8106]
Length = 833
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 182/553 (32%), Positives = 275/553 (49%), Gaps = 85/553 (15%)
Query: 199 SEASIEPLLDKCISCVPGLSK--------RLYHQLENCGFYTLRKLLHHFPRTYADL--Q 248
S +P+++K + L + R +L G YT+ LL+++PR + D Q
Sbjct: 120 SPIQTQPIVEKSPNAASSLEQPLAKVVGPRNADRLAKLGLYTVYDLLYYYPRDHIDYARQ 179
Query: 249 NAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQK 308
A DL G+ + ++ + C FS + + T D + ++G
Sbjct: 180 VAIRDLVPGETVTLVAKV-----KRCNC-FS--------SPRNKKLTILDLTLTDNTGN- 224
Query: 309 KKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYN--ID 366
L + +FF G RF++ + + + G + SG V++ N Y + N ++
Sbjct: 225 ----LKISRFFAGPRFSNAGWQNKQKYNYPQGTIIAASGLVKS----NKYGITLDNPELE 276
Query: 367 VLKDE----DDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQE 422
VL D + + GR P+YP G+ A L+R + L D +P+ +
Sbjct: 277 VLDQAGGQIDSMKI---GRVVPVYPLSEGVGADLVRKAVLSVLPTTSQLQDSLPQGLLDL 333
Query: 423 FGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLD 482
+ L+ + DA IH P D AR+RL+FDEFFYLQLG L Q
Sbjct: 334 YQLIGVQDAIQNIHFPPDRDCLAAARRRLVFDEFFYLQLGLLQQR--------------- 378
Query: 483 KYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVG 542
+ +K +A + L ++ LP+ T++Q I EI+ DL+ PMNRL+QGDVG
Sbjct: 379 QSQKKATTSAVLAPTGKLIQQFDEILPFEFTNAQQRVIKEILIDLQSSEPMNRLVQGDVG 438
Query: 543 CGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGS 602
GKTV+A +A + I +GYQAA M PTE+LA QHY L+ + M + LLTGS
Sbjct: 439 AGKTVLAVVAMLAAIQAGYQAALMAPTEVLAEQHYRKLVSWFNLMH-----LSVELLTGS 493
Query: 603 TPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKL 662
T + R I K L+TG++ +++GTH+LI + V+F L L ++DEQ RFGV QR R K
Sbjct: 494 TKAAKRRQIHKQLETGELPVLVGTHALIQDTVKFHRLGLVVIDEQHRFGVQQRARLQQK- 552
Query: 663 YYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGR 722
+PHVL M+ATPIPRTLAL L+GD+ ++Q+ +LPPGR
Sbjct: 553 ----------------------GESPHVLTMTATPIPRTLALTLHGDLDVSQLDELPPGR 590
Query: 723 IPIKTYIIEGNEK 735
PI+T I+ G ++
Sbjct: 591 QPIQTTILMGKQR 603
>gi|87124312|ref|ZP_01080161.1| putative DNA helicase [Synechococcus sp. RS9917]
gi|86167884|gb|EAQ69142.1| putative DNA helicase [Synechococcus sp. RS9917]
Length = 856
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 179/533 (33%), Positives = 263/533 (49%), Gaps = 61/533 (11%)
Query: 204 EPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFI 263
+P LD + V G+ +L +L G +R LL ++PR Y D + +
Sbjct: 154 QPTLDTPLGKVKGVGPKLAERLAALGLLLVRDLLLYYPRDYVD-------------YSAL 200
Query: 264 GEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTR 323
I ++AG + + + + C + ++ + Q L + +F G R
Sbjct: 201 RRI---EALQAGETATIVASVRRCHGFTSPRNPNLSILELQL-QDPTGRLKVTRFLAGRR 256
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKD-EDDLSLRAKGRP 382
F+S L S ++ G V VSG V+A ++ + I+V++ + L R GR
Sbjct: 257 FSSPAALHSQTRQYPAGATVAVSGLVKAGPYGLSFQ--DPLIEVMESAQAPLRSRQIGRL 314
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHID 442
P+YP GL A LR T+ L +P+ + Q GLL A IHQP D
Sbjct: 315 LPVYPLTEGLTADRLRRTVDAVLPLGRLWPEPLTVQQRQRLGLLTRSQALQAIHQPPDRD 374
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
AR+RL+FDEF LQL + L + + P L A + L
Sbjct: 375 SLQQARRRLVFDEFLLLQL-----------GLMLRRAALRQRQAPALRA--LGARDGLVG 421
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
+ L LP+ T++Q ++EI DL +P PM RL+QGDVG GKTVVA A ++ + +G+Q
Sbjct: 422 RFLDELPFRFTAAQERVLAEIELDLARPEPMARLVQGDVGSGKTVVAIAALLKAVEAGWQ 481
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
AFM PTE+LA QHY L + L + + LLTG+TP R + DL G + +
Sbjct: 482 GAFMAPTEVLAEQHYRSLCRWLIPLNV-----SVELLTGATPRPVRRRLLTDLANGQLNV 536
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
++GTH+LI + V+FS L L +VDEQ RFGV QR R K
Sbjct: 537 LVGTHALIEDPVDFSRLGLVVVDEQHRFGVKQRNRLLGK--------------------- 575
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
+ PH+L M+ATPIPRTLAL+L+GD+ ++QI +LPPGR PIKT ++ + +
Sbjct: 576 --GLQPHLLTMTATPIPRTLALSLHGDLDVSQIDELPPGRTPIKTRLLTASAR 626
>gi|78779148|ref|YP_397260.1| ATP-dependent DNA helicase RecG [Prochlorococcus marinus str. MIT
9312]
gi|78712647|gb|ABB49824.1| ATP-dependent DNA helicase RecG [Prochlorococcus marinus str. MIT
9312]
Length = 818
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 170/528 (32%), Positives = 265/528 (50%), Gaps = 81/528 (15%)
Query: 223 HQLENCGFYTLRKLLHHFPRTYADLQN--AQIDLDDGQYFIFIGEIISSRGMKA--GCSF 278
++L G + ++ L+++FPRTY D N I+L + I I K+ +
Sbjct: 139 NKLNELGIFHIKDLINYFPRTYLDYTNRVKIINLKPDNLYTCIVNIKRFYIHKSTKNSNL 198
Query: 279 SFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHK 338
S + +V E + + T KF G RF S F S + +
Sbjct: 199 SIMNFVVSDETSSIKVT---------------------KFLLGRRFRSYSFFSSQKSLYT 237
Query: 339 VGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLR 398
G + +SGKV+ + + I++LKD +D + G+ P+Y L +L
Sbjct: 238 TGTKLAISGKVKLTEYGKTF--VDPQIEILKDNND-NFNFSGKILPLY----SLAEALSN 290
Query: 399 DTIARALQALPANFDPVPKEITQE----FGLLCLFDAYMGIHQPKHIDEADLARKRLIFD 454
+ + ++++ P+ + Q+ LL ++ + IH P ++KRL+FD
Sbjct: 291 ISFIKLMKSVLIYAKQYPEILNQKQLDSLSLLSKGESLINIHLPPTQQALIESKKRLVFD 350
Query: 455 EFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTS 514
E F LQ+ L L + + A + SL K L P+ LT
Sbjct: 351 ELFLLQIKFL---------------LRKRQTNKHVIAKQLPQKKSLLKDFLNNFPFELTK 395
Query: 515 SQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLAT 574
SQ++ ++EI DL PVPM+RLLQGDVG GKT++A + + VI Q AFMVPTE+LA
Sbjct: 396 SQVNVLNEIKKDLSNPVPMSRLLQGDVGSGKTIIAIASLLIVIEKNLQGAFMVPTEVLAE 455
Query: 575 QHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKV 634
QHY++LLK L+ + + LLTG+TP K+ + I +L+ G + +++GTH+L +KV
Sbjct: 456 QHYKNLLKYLNPL-----LVSVELLTGNTPQKRRKEILSNLKNGLVDILVGTHALFEDKV 510
Query: 635 EFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMS 694
F++L + ++DEQ RFGV QR R +K T++ L+M+
Sbjct: 511 IFNSLAMVVIDEQHRFGVTQRNRLLNKGENTNL-----------------------LSMT 547
Query: 695 ATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYK 742
ATPIPRTLAL++YGD+ ++QIT+LPPGR+PI T II E N++K
Sbjct: 548 ATPIPRTLALSIYGDLDVSQITELPPGRVPITTKIIS--EDDLTNLFK 593
>gi|357438677|ref|XP_003589615.1| ATP-dependent DNA helicase recG [Medicago truncatula]
gi|355478663|gb|AES59866.1| ATP-dependent DNA helicase recG [Medicago truncatula]
Length = 432
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 152/211 (72%), Gaps = 34/211 (16%)
Query: 566 MVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIG 625
MVP+EL+A QHYEHLL LL+N++E K KP +ALLTGS P+KQSR+IRK +QTG+I++VIG
Sbjct: 1 MVPSELVAIQHYEHLLALLENLDEVKFKPTVALLTGSIPIKQSRLIRKGIQTGEISIVIG 60
Query: 626 THSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQH 685
THSL A+ VEFSALR+A+VDEQ RFGV+QRGRFNSKL+Y S S + +D S K D +
Sbjct: 61 THSLFADSVEFSALRIAVVDEQHRFGVIQRGRFNSKLFYKSSISSLEDAITDKSSKTDDY 120
Query: 686 MAPHVLAMSATPIPRTLALALYGDMSLTQ------------------------------- 714
MAPHVLAMSATPIPRTLALALYGDMSLTQ
Sbjct: 121 MAPHVLAMSATPIPRTLALALYGDMSLTQQRNSGRTCPAGSNQTLDLRVLIGPNSSLTKP 180
Query: 715 ---ITDLPPGRIPIKTYIIEGNEKGYENVYK 742
ITDLP GRIP++TY IEG++KG+E+ YK
Sbjct: 181 VYKITDLPQGRIPVQTYAIEGSDKGFEDAYK 211
>gi|427414060|ref|ZP_18904250.1| ATP-dependent DNA helicase RecG [Veillonella ratti ACS-216-V-Col6b]
gi|425714840|gb|EKU77842.1| ATP-dependent DNA helicase RecG [Veillonella ratti ACS-216-V-Col6b]
Length = 681
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 167/531 (31%), Positives = 263/531 (49%), Gaps = 82/531 (15%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFIG 264
+++ + + G+ QL G + LL +FPRTY D + + L G G
Sbjct: 1 MEESLLTIKGVGPGRVKQLNKLGITDVSSLLTYFPRTYEDRSVSYLIGALKQGAVGATEG 60
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
+++ + K S LE+ +G + T ++V + G KK Y
Sbjct: 61 TVLNVQEKKPRRGLSILEIFIG------DATGRLKIVLFNQGYKKNFY------------ 102
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
KVG+ + V GKV + +M +I++L++ A+ P
Sbjct: 103 -------------KVGQRLHVYGKVEF--AYGSLQMNTPHIEMLREGQ----VAEAGIVP 143
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
+YP G++ ++R ++ A A + +P +IT+E + ++A+ +H P ++
Sbjct: 144 VYPLVDGVSQFVIRHAVSNWFAANDALPELLPPDITKEHNFMTRYEAFKEMHNPLTVERY 203
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
LARK+L ++E F +Q G L L + R+ M+ L
Sbjct: 204 GLARKQLAYEELFIMQAGLL----------------LLREREQAEIGIKMQPDGDLVPAF 247
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
L+ LP++LT Q A +EI D+++ PM RLLQGDVG GKTVV L+ ++ + +GYQ A
Sbjct: 248 LKELPFALTGDQRKAFNEIANDMQEERPMRRLLQGDVGSGKTVVGALSLLKAVENGYQGA 307
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
M PTE+LA QHYE L L+ + + K+ALLTGST + ++I + L G I +VI
Sbjct: 308 LMAPTEILAQQHYEGLTDLMAGL----GRVKLALLTGSTKPGERQIIYEGLADGTIDIVI 363
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+LI E+VEF L L I+DEQ RFGV QR K ++
Sbjct: 364 GTHALIQEQVEFKKLALVIIDEQHRFGVEQRATLQRKGHH-------------------- 403
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
PH+L M+ATPIPRT+ L++YGD+ ++ I ++PPGR P+ TY ++ + K
Sbjct: 404 ---PHMLVMTATPIPRTMTLSIYGDLEVSLIKEMPPGRKPVLTYAVDSSYK 451
>gi|282898424|ref|ZP_06306414.1| hypothetical protein CRD_02961 [Raphidiopsis brookii D9]
gi|281196590|gb|EFA71496.1| hypothetical protein CRD_02961 [Raphidiopsis brookii D9]
Length = 829
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 179/561 (31%), Positives = 282/561 (50%), Gaps = 79/561 (14%)
Query: 186 NESSTSSEVGSLPSEASIE----PLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFP 241
N+ +T+ V + P + P +D+ + + + + L T+R LL ++P
Sbjct: 107 NQPTTTKLVKTTPIVNEVNQKPAPKIDQKLRDLAEIGIKRAENLYRLELETVRDLLFYYP 166
Query: 242 RTYADL--QNAQIDLDDGQYFIFIGEIISSRGMKA--GCSFSFLEVIVGCEIADTETTSG 297
R Y D Q +L G+ IGE+ + S LE+++ +
Sbjct: 167 RDYIDYARQVNIRELKGGETVTIIGEVRRCNCFTSPKNQKLSILELMLKDQ--------- 217
Query: 298 DEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNH 357
+GQ K + +F+ G+RF+S + + ++ ++ G V G V+ S
Sbjct: 218 -------TGQVK-----VSRFYAGSRFSSKGWQEGLKRRYTPGTLVAACGLVKP--SKYG 263
Query: 358 YEMREYNIDVLKDEDD-LSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVP 416
+ I+VL + D + GR PIY G+ A+ +R + L ++ + DP+P
Sbjct: 264 LTLDNPEIEVLANSGDAIDSFTIGRVVPIYGLTEGVVANAVRQAVMAVLPSVKSLQDPLP 323
Query: 417 KEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFE 476
+ +++ L+ L A IH P+ D +A++RL+FDEFFYLQ+G
Sbjct: 324 PGLRKKYNLIELKQAIPNIHFPQDSDTLKMAKRRLVFDEFFYLQVG-------------- 369
Query: 477 KEGLLDKYRKPRLNAA--YMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMN 534
LL + ++ + N + L + LP+ T +Q I++I+ DL++ MN
Sbjct: 370 ---LLQRQKQAKANQTGPILAPSGKLLDQFHEILPFKFTKAQERVINDILNDLQKSTAMN 426
Query: 535 RLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKP 594
RL+QGDVG GKTVVA +A + I SGYQAA M PTE+LA QHY L+ + + H P
Sbjct: 427 RLVQGDVGSGKTVVAVVAILAAIQSGYQAALMAPTEVLAEQHYRKLVTWFNLL----HLP 482
Query: 595 KIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQ 654
+ LLTGST + R I L+TG++ L++GTH+LI +KV+F L L ++DEQ RFGV Q
Sbjct: 483 -VELLTGSTKTSKRREIHSQLETGELPLLVGTHALIQDKVKFHRLGLVVIDEQHRFGVEQ 541
Query: 655 RGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQ 714
R + K PHVL M+ATPIPRTLAL ++GD+ ++Q
Sbjct: 542 RAKLQQK-----------------------GEQPHVLTMTATPIPRTLALTVHGDLDVSQ 578
Query: 715 ITDLPPGRIPIKTYIIEGNEK 735
I +LPPGR IKT ++ G+++
Sbjct: 579 IDELPPGRQQIKTSLLTGHQR 599
>gi|260435719|ref|ZP_05789689.1| ATP-dependent DNA helicase RecG [Synechococcus sp. WH 8109]
gi|260413593|gb|EEX06889.1| ATP-dependent DNA helicase RecG [Synechococcus sp. WH 8109]
Length = 838
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 184/575 (32%), Positives = 279/575 (48%), Gaps = 69/575 (12%)
Query: 170 RFGLSEAWPSLYPALPNESSTSSEVGSLPSEASIEPL-LDKCISCVPGLSKRLYHQLENC 228
R L E L P+ P ++ +V + P + + PL LD I+ + G+ + +L +
Sbjct: 102 RQWLHELRHRLEPSAPM-AAPRLKVQASPQQRASSPLQLDSPITQIRGVGPKFAARLASI 160
Query: 229 GFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCE 288
G +R LL ++PR + D + I ++S G + + + I C
Sbjct: 161 GLLLVRDLLRYYPRDHVDYSAMR----------RIEALVS------GETATIVATIRRCN 204
Query: 289 IADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGK 348
+ + ++ + Q L + +F G RF+S + K + + VG V VSG
Sbjct: 205 GFVSPRNTNLAIIELQL-QDPTGRLKVSRFLAGKRFSSPAYFKGQQRLYPVGATVAVSGL 263
Query: 349 VRAMRSNNHYEM--REYNIDVLKDEDDLSLRAK-GRPYPIYPSKGGLNASLLRDTIARAL 405
V+ + Y + ++ I+VL GR +P+YP G+ A R I + L
Sbjct: 264 VK----DGPYGITFQDPLIEVLDSPSSPVKSPSIGRIFPVYPLTEGVGADRFRSLIDQVL 319
Query: 406 QALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLY 465
+ DP+P I ++F L L +A +H PK + D R+RL+FDEF LQL
Sbjct: 320 PLAASWPDPLPAAIQRQFLLPALSEALQALHAPKDRESLDRGRRRLVFDEFLLLQL---- 375
Query: 466 QMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIW 525
+ L P L+ + L + + LP+ T++Q EI
Sbjct: 376 -------GLLRRRQALRSRTGPDLD--LQSSSNGLVGEFMDLLPFRFTAAQQRVFQEIEA 426
Query: 526 DLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLD 585
DL + PM RL+QGDVG GKTVVA A + I SG+Q A M PTE+LA QHY +L + L
Sbjct: 427 DLARNEPMARLVQGDVGSGKTVVAIAALLSTIASGWQGALMAPTEVLAEQHYRNLCQWLP 486
Query: 586 NMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVD 645
+ +ALLTGSTP + R + DL G + +++GTH+L+ + V F+ L L +VD
Sbjct: 487 QLHV-----SVALLTGSTPRPRRRELMDDLANGSLKVLVGTHALLEDPVVFNRLGLVVVD 541
Query: 646 EQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALA 705
EQ RFGV QR R +K + PH+L M+ATPIPRTLAL+
Sbjct: 542 EQHRFGVHQRDRLLNK-----------------------GLQPHLLTMTATPIPRTLALS 578
Query: 706 LYGDMSLTQITDLPPGRIPIKTYIIEG--NEKGYE 738
++GD+ ++QI +LPPGR PI+T ++ EK YE
Sbjct: 579 MHGDLDVSQIDELPPGRTPIRTRMLTAAKREKAYE 613
>gi|428219452|ref|YP_007103917.1| ATP-dependent DNA helicase RecG [Pseudanabaena sp. PCC 7367]
gi|427991234|gb|AFY71489.1| ATP-dependent DNA helicase RecG [Pseudanabaena sp. PCC 7367]
Length = 833
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 172/533 (32%), Positives = 265/533 (49%), Gaps = 73/533 (13%)
Query: 207 LDKCISCVPGLSKRLYHQLEN-CGFYTLRKLLHHFPRTYADL--QNAQIDLDDGQYFIFI 263
LD + + G+ R+ +L N +T+ +L+++PR + D Q DL+DG+ I
Sbjct: 135 LDSPLQYLEGVGPRIAERLANRLELHTVADMLNYYPRDHVDYARQVKIKDLNDGETVTII 194
Query: 264 GEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTR 323
G I FS ++ E D +I L +F+ GTR
Sbjct: 195 GTI---------RRFSCFTSPKNKKLTIVEVMVSDHTGSIK----------LNRFWTGTR 235
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLK-DEDDLSLRAKGRP 382
+++ + + + ++ G V SG V+ RS + + I+VL+ +D + GR
Sbjct: 236 YSNYGWQQQQKSQYPKGATVAASGVVK--RSKYGLTLDNFEIEVLEHSQDRIESHTIGRV 293
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHID 442
PIYP G++ L+R + + L + DP+P+++ +E L+ L A +H P
Sbjct: 294 VPIYPLSEGISPELIRRVVVQCLPVVNQIKDPLPEKLIKEHKLIKLAKAIAQVHYPPDSH 353
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
+ A KRL FD++FY +L LY R+ + A+ S L
Sbjct: 354 ALNDAVKRLTFDKYFYRRLVSLY-------------------RRNQQQASPFIAQSKLVD 394
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
+ + LP+ LT++Q ++EI DL++ PMNRLLQGDVG GKTVV+ A + I SG+Q
Sbjct: 395 EFEQRLPFQLTNAQQRCVNEIRADLQRNTPMNRLLQGDVGAGKTVVSVFALLTAIESGFQ 454
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
A M PTE+L QHY ++ + + + LLTGST + R I L+TG++ L
Sbjct: 455 TALMAPTEVLVEQHYRKIVDWFNLL-----NLPVELLTGSTKAAKRRQILAQLETGELPL 509
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
VIGTH+LI + V F L LA++DEQ RFG QR R K +D
Sbjct: 510 VIGTHALIQDGVNFHRLGLAVIDEQHRFGRDQRSRLLQK-------------GTD----- 551
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
PHVL M+ATPIPRTL L ++ ++ I +LPPGR PI+T +++G ++
Sbjct: 552 -----PHVLIMTATPIPRTLYLT-NSEIEVSLIDELPPGRKPIQTNLLKGAQR 598
>gi|148239657|ref|YP_001225044.1| ATP-dependent DNA helicase RecG [Synechococcus sp. WH 7803]
gi|147848196|emb|CAK23747.1| ATP-dependent DNA helicase [Synechococcus sp. WH 7803]
Length = 843
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 167/530 (31%), Positives = 258/530 (48%), Gaps = 61/530 (11%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
LD +S V G+ + +L + G +R LL H+PR Y D + + I
Sbjct: 144 LDAPLSRVRGIGPKQAERLASLGLLVVRDLLLHYPRDYVD-------------YSALRRI 190
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
+ G + + + + C + ++ + Q + + +F G RF++
Sbjct: 191 ---EALVPGETATIVATVRRCHGFTSPRNPNLSIIELQL-QDPTGRIKVSRFLAGRRFSN 246
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKD-EDDLSLRAKGRPYPI 385
+L + G V VSG V+ ++ + I+V++ + L + GR P+
Sbjct: 247 PSYLHGQTRLYPNGATVAVSGLVKDGPYGRSFQ--DPLIEVMESPQAPLQSKRIGRLLPV 304
Query: 386 YPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
Y GL A R + L ++ +P+P + Q LL A IH+P+ ++
Sbjct: 305 YSLTEGLTADRFRSLVEATLPSIRLWPEPLPAQRRQARQLLHRHQAMTAIHRPESSEQLQ 364
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLL 505
AR RL+FDEF LQLG + ++ L + P L L + L
Sbjct: 365 QARHRLVFDEFLLLQLGLM-----------QRRAALRQRTAPSLK--ITSDRDGLLSRFL 411
Query: 506 RALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAF 565
LP+ T++Q ++EI DL++ PM RL+QGDVG GKTVVA A ++ I +G Q A
Sbjct: 412 NNLPFQFTNAQTRVLAEIDADLERSEPMARLVQGDVGSGKTVVAVAALLKAIQAGLQGAM 471
Query: 566 MVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIG 625
M PTE+LA QHY L + L + + LLTGSTP+K+ R + D+ +G +++G
Sbjct: 472 MAPTEVLAEQHYRSLCQWLPPLHV-----TVELLTGSTPLKKRRRLLADVASGACKVLVG 526
Query: 626 THSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQH 685
TH+L+ + V F L L +VDEQ RFGV QR R K
Sbjct: 527 THALLEDPVAFERLGLVVVDEQHRFGVRQRNRLLGK-----------------------G 563
Query: 686 MAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
+ PH+L M+ATPIPRTLAL+L+GD+ ++QI +LPPGR PI T ++ G+E+
Sbjct: 564 LQPHLLTMTATPIPRTLALSLHGDLDVSQIDELPPGRTPIMTTMLAGSER 613
>gi|87302807|ref|ZP_01085618.1| ATP-dependent DNA helicase RecG [Synechococcus sp. WH 5701]
gi|87282690|gb|EAQ74648.1| ATP-dependent DNA helicase RecG [Synechococcus sp. WH 5701]
Length = 862
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 186/552 (33%), Positives = 272/552 (49%), Gaps = 69/552 (12%)
Query: 188 SSTSSEVGSLPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADL 247
+S G+ + + I+P D ++ VPG+ + +L G R LL H+PR Y D
Sbjct: 146 ASNGGPSGARRTASPIQP--DTPLAEVPGIGPKTATRLAGLGLLLARDLLRHYPRDYLDY 203
Query: 248 QNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQ 307
N + I E++ S ++ + + + + + I Q
Sbjct: 204 AN----------LVRIRELVPG---------STATIVATVQRSHAFASPRNPRLVILELQ 244
Query: 308 KKKI--YLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNI 365
I L L KFF G RF+S +LK+ + + G V SG VR ++ +++ +
Sbjct: 245 LHDITGRLRLSKFFAGRRFSSPGWLKAQQRQFPPGCSVAASGLVR--QTPYGPTLQDPLL 302
Query: 366 DVLKDEDDLSLRAK--GRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEF 423
+VL D + +R++ GR P+Y GL A LR I L A DP+P + ++
Sbjct: 303 EVL-DSPNTPVRSRQIGRLVPVYALTEGLGAERLRQAIQTVLTAAAHWGDPLPAALRRQE 361
Query: 424 GLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDK 483
GL A+ G+H P D+ +R RL+FDEF LQL L + +
Sbjct: 362 GLQDRATAWRGLHDPADRDDLRASRHRLVFDEFLLLQLSLLQRRAQ-------------L 408
Query: 484 YRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGC 543
R+P G SSL L LP+ LT +Q +++I DL+Q PM RLLQGDVG
Sbjct: 409 ARRPARPLRLPRGQSSLMASFLELLPFQLTEAQRRVLADIQADLEQEQPMARLLQGDVGS 468
Query: 544 GKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGST 603
GKTVVA A + I +G Q A M PTE+LA QH L + L + ALLTGST
Sbjct: 469 GKTVVAIAALLVAIEAGCQGALMAPTEVLAEQHARKLGEWLSQLHV-----STALLTGST 523
Query: 604 PVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLY 663
P + R + +DL G + L++GTH+L+ + V F+ L L +VDEQ RFGV QR R K
Sbjct: 524 PAGRRRQLLQDLANGQLQLLVGTHALLEDPVAFARLGLVVVDEQHRFGVRQRDRLMGK-- 581
Query: 664 YTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRI 723
+ PH+L M+ATPIPRTLAL+++GD+ ++QI LPPGR
Sbjct: 582 ---------------------GLQPHLLTMTATPIPRTLALSVHGDLEVSQIDGLPPGRT 620
Query: 724 PIKTYIIEGNEK 735
PI+T ++ G ++
Sbjct: 621 PIRTRLLRGGQR 632
>gi|42528079|ref|NP_973177.1| ATP-dependent DNA helicase RecG [Treponema denticola ATCC 35405]
gi|449110948|ref|ZP_21747547.1| ATP-dependent DNA helicase RecG [Treponema denticola ATCC 33521]
gi|449114236|ref|ZP_21750716.1| ATP-dependent DNA helicase RecG [Treponema denticola ATCC 35404]
gi|41819124|gb|AAS13096.1| ATP-dependent DNA helicase RecG [Treponema denticola ATCC 35405]
gi|448957233|gb|EMB37985.1| ATP-dependent DNA helicase RecG [Treponema denticola ATCC 35404]
gi|448959211|gb|EMB39932.1| ATP-dependent DNA helicase RecG [Treponema denticola ATCC 33521]
Length = 678
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 148/363 (40%), Positives = 207/363 (57%), Gaps = 36/363 (9%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHID 442
P+YP GL + LR IA AL+ D +P+ I Q++GL + +H PK +
Sbjct: 145 PVYPLTSGLGQAKLRKIIASALKMYAHGIDSELPESILQKYGLPPKQEVLFMLHTPKSMA 204
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGT--QFEKEGLLDKY--RKPRLNAAYMEGWS 498
E + R LIF+EFF Q + +E G E E +DK ++P L
Sbjct: 205 EVEKGRYALIFEEFFLFQYAIGMRSIERRGRLPNLEDERNIDKTVKKEPVLR-------- 256
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
L LL L + LT QLS +EI DL P PM RL+QGDVG GKT+VAFLAC++VI
Sbjct: 257 PLQSSLLERLNFKLTQDQLSVCAEINEDLDGPNPMARLMQGDVGSGKTLVAFLACLKVIE 316
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
G Q AF+ PTELLA QH E+ +LL+ + ++A LTG+T K + ++LQ G
Sbjct: 317 QGGQTAFLAPTELLARQHAENAARLLEPL-----GIRLAFLTGNTKAKGRSRLLQELQKG 371
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+I L+IGTHSL ++ V++ LRLA++DEQ RFGV+QR + + G
Sbjct: 372 NIDLIIGTHSLFSQGVQYKNLRLAVIDEQHRFGVLQR----------------SAIIQKG 415
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYE 738
+ +++ +PH+L MSATPIPRTLAL+++GD+ ++ I +PPGR PI TY+ E E
Sbjct: 416 AESNEEKRSPHLLMMSATPIPRTLALSIFGDLDISTIKTMPPGRKPIITYV--AGEDKAE 473
Query: 739 NVY 741
VY
Sbjct: 474 RVY 476
>gi|337285990|ref|YP_004625463.1| ATP-dependent DNA helicase RecG [Thermodesulfatator indicus DSM
15286]
gi|335358818|gb|AEH44499.1| ATP-dependent DNA helicase RecG [Thermodesulfatator indicus DSM
15286]
Length = 810
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 204/630 (32%), Positives = 281/630 (44%), Gaps = 138/630 (21%)
Query: 135 YDETKAGGSEMKSLLADQSCEAVVSNPMDAELRVDRFGLSEAWPSL---YPALPNESSTS 191
+DE KA ++ SLL D S E L + WP L Y L
Sbjct: 70 FDEKKAHLEKIFSLLEDASQET----------------LQKVWPPLEDVYIDLETYRLYR 113
Query: 192 SEVGSLPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ 251
E L K + + G+ +L H+L T+ LL PRTY D + +
Sbjct: 114 KE-------------LSKPVQFLKGVGPKLAHKLATREVKTVEDLLFFLPRTYEDRRKMR 160
Query: 252 I--DLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKK 309
L G+ + GE++ S +K F E+V D
Sbjct: 161 FIGSLKTGEQAVVEGEVVLSGVVKFKRRRVF------------------EIVISD----- 197
Query: 310 KIYLHLKKFFRGTRFTSIPFLKSIEGKHKV----GEFVCVSGKVRAMRSNNHYEMREYNI 365
GT + + E +H+ G V ++G++ EM +
Sbjct: 198 -----------GTGLLAAKWFHFNEKRHRETFRPGRKVILAGEISTFAGRK--EMIHPEV 244
Query: 366 DVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPAN-FDPVPKEITQEFG 424
+ +DE + L GR P+YP+ G++ +LR IA A++ P+P +I +
Sbjct: 245 EFPEDEK-VGLHV-GRILPVYPTIEGVSPKVLRRIIANAVEEYAEKAISPIPAKILNKRR 302
Query: 425 LLCLFDAYMGIHQPKHID-------EADLARKRLIFDEFFYLQLG---RLYQMLEGLGTQ 474
LL + A GIH P D E + K L FDEFFYL+L R Q+ G
Sbjct: 303 LLPVPLALKGIHFPDPQDDIYILNEEKSIYHKSLAFDEFFYLELALALRKSQIARAPGIA 362
Query: 475 FEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMN 534
F K PR+ ++ L++LP+ LT +Q + EI D+ P PMN
Sbjct: 363 F-------KPGTPRV------------RRFLKSLPFKLTRAQTRVLKEIEKDMTSPYPMN 403
Query: 535 RLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKL--LDNMEEDKH 592
RLLQGDVGCGKTVVAFLA + I +GYQ A M PTE+LA QHY + K L +E
Sbjct: 404 RLLQGDVGCGKTVVAFLAALIAIDNGYQVALMAPTEILAEQHYLNFKKYAGLIGVE---- 459
Query: 593 KPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGV 652
IALLTG ++ + I + L+ G I LVIGTH+L E VEF L L IVDEQ RFGV
Sbjct: 460 ---IALLTGGKTAREKKEIYQGLKEGHINLVIGTHALFQEAVEFKKLGLVIVDEQHRFGV 516
Query: 653 VQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSL 712
+QR K + + P L M+ATPIPRTLA+ +YGD+ +
Sbjct: 517 LQRAALRQK---------------------AKGLEPDTLVMTATPIPRTLAMTVYGDLDV 555
Query: 713 TQITDLPPGRIPIKTYIIEGN--EKGYENV 740
+ I +LP GR P+KTY+ +K YE V
Sbjct: 556 SIIDELPAGRKPVKTYLFTAKDRQKAYEIV 585
>gi|449105706|ref|ZP_21742406.1| ATP-dependent DNA helicase RecG [Treponema denticola ASLM]
gi|451970007|ref|ZP_21923236.1| ATP-dependent DNA helicase RecG [Treponema denticola US-Trep]
gi|448966787|gb|EMB47433.1| ATP-dependent DNA helicase RecG [Treponema denticola ASLM]
gi|451701069|gb|EMD55549.1| ATP-dependent DNA helicase RecG [Treponema denticola US-Trep]
Length = 678
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 148/363 (40%), Positives = 207/363 (57%), Gaps = 36/363 (9%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHID 442
P+YP GL + LR IA AL+ D +P+ I Q++GL + +H PK +
Sbjct: 145 PVYPLTSGLGQAKLRKIIASALKMYGQGIDSELPESILQKYGLPPKQEVLFMLHTPKSMA 204
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGT--QFEKEGLLDKY--RKPRLNAAYMEGWS 498
E + R LIF+EFF Q + +E G E E +DK ++P L
Sbjct: 205 EVEKGRYALIFEEFFLFQYAIGMRSIERRGRLPNLEDERNIDKTVKKEPVLR-------- 256
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
L LL L + LT QLS +EI DL P PM RL+QGDVG GKT+VAFLAC++VI
Sbjct: 257 PLQSSLLERLNFKLTQDQLSVCAEINEDLDGPNPMARLMQGDVGSGKTLVAFLACLKVIE 316
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
G Q AF+ PTELLA QH E+ +LL+ + ++A LTG+T K + ++LQ G
Sbjct: 317 QGGQTAFLAPTELLARQHAENAARLLEPL-----GIRLAFLTGNTKAKGRSRLLQELQKG 371
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+I L+IGTHSL ++ V++ LRLA++DEQ RFGV+QR + + G
Sbjct: 372 NIDLIIGTHSLFSQGVQYKNLRLAVIDEQHRFGVLQR----------------SAIIQKG 415
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYE 738
+ +++ +PH+L MSATPIPRTLAL+++GD+ ++ I +PPGR PI TY+ E E
Sbjct: 416 AESNEEKRSPHLLMMSATPIPRTLALSIFGDLDISTIKTMPPGRKPIITYV--AGEDKAE 473
Query: 739 NVY 741
VY
Sbjct: 474 RVY 476
>gi|421058838|ref|ZP_15521487.1| ATP-dependent DNA helicase RecG [Pelosinus fermentans B3]
gi|421067658|ref|ZP_15529113.1| ATP-dependent DNA helicase RecG [Pelosinus fermentans A12]
gi|392448836|gb|EIW26012.1| ATP-dependent DNA helicase RecG [Pelosinus fermentans A12]
gi|392460030|gb|EIW36381.1| ATP-dependent DNA helicase RecG [Pelosinus fermentans B3]
Length = 687
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 172/530 (32%), Positives = 251/530 (47%), Gaps = 82/530 (15%)
Query: 202 SIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQY 259
S+E I + G+ + + L G +T+ LL H+PR Y D ++ +L DGQ
Sbjct: 5 SLENFKKDNIQYIKGVGPKKANLLTKLGIFTIGDLLEHYPRRYEDRSQLKMINNLTDGQV 64
Query: 260 FIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFF 319
F +++ K ++ VG ++T ++V + +KKIY
Sbjct: 65 ENFKARMMNCAESKPRRGLQITKITVG------DSTGTVQLVWFNQPHRKKIY------- 111
Query: 320 RGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAK 379
+G V V+GKV+ + E++ I+++ D D L
Sbjct: 112 ------------------GLGAEVLVTGKVKKIY---QVEIQNPEIEMITDMDTLE---A 147
Query: 380 GRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPK 439
G PIY + + LR+ I + L A + +P I ++F LL A+ IH P
Sbjct: 148 GYITPIYAANESITQRFLRNLIRQILTEYNATAEILPPIIIKQFSLLDRKTAFENIHFPL 207
Query: 440 HIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSS 499
++D AR+RL+F+E + LQ G LY + K +
Sbjct: 208 NMDVLKQARRRLVFEELYLLQCGLLY---------------IKKQNRSNTIGIKHGPDGC 252
Query: 500 LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
L KK+ LP+SLT Q + EI D++ PM RLLQGDVG GKTV+A LA + + +
Sbjct: 253 LVKKVSEQLPFSLTEDQQKVLLEIALDMEDTKPMQRLLQGDVGSGKTVIAALALAKTVEN 312
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
GYQ A MVPTE+LA QHY L L + ++ +LTG P + + D+++G
Sbjct: 313 GYQGAMMVPTEILAEQHYSTLSNLFLPL-----GIRVKILTGKLPKRTHEQVVADIKSGL 367
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
+ +VIGTH+LI E VEF L L I DEQ RFGV QR + K G+
Sbjct: 368 VDVVIGTHALIQESVEFQYLGLVITDEQHRFGVRQRAKLQEK----------------GN 411
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYI 729
P VL M+ATPIPRT+AL +YGD+ ++ I LPPGR IKTY+
Sbjct: 412 -------MPDVLVMTATPIPRTMALTVYGDLDVSTIKQLPPGRKIIKTYV 454
>gi|357462165|ref|XP_003601364.1| ATP-dependent DNA helicase recG [Medicago truncatula]
gi|355490412|gb|AES71615.1| ATP-dependent DNA helicase recG [Medicago truncatula]
Length = 422
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 124/211 (58%), Positives = 149/211 (70%), Gaps = 34/211 (16%)
Query: 566 MVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIG 625
MVP+EL+ QHYEHLL LL+N +E K KP +ALLTGS P+KQSR+IRK +QTG+I++VIG
Sbjct: 1 MVPSELVTIQHYEHLLALLENSDEVKFKPTVALLTGSIPIKQSRLIRKGIQTGEISIVIG 60
Query: 626 THSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQH 685
THSL A+ VEFSALR+A+VDEQ RFGV+QRGRFNSKL+Y S S + +D S K D +
Sbjct: 61 THSLFADSVEFSALRIAVVDEQHRFGVIQRGRFNSKLFYKSSISSLEDAITDKSSKTDDY 120
Query: 686 MAPHVLAMSATPIPRTLALALYGDMSLTQ------------------------------- 714
MAPHVL MSATPIPRTLALALYGDMSLTQ
Sbjct: 121 MAPHVLVMSATPIPRTLALALYGDMSLTQQRNSGRTCPGGSNQTLDLRVLIGPNSSLTKP 180
Query: 715 ---ITDLPPGRIPIKTYIIEGNEKGYENVYK 742
ITDLP GRIP++TY IEG++KG+E+ YK
Sbjct: 181 IYKITDLPQGRIPVQTYAIEGSDKGFEDAYK 211
>gi|225873359|ref|YP_002754818.1| ATP-dependent DNA helicase RecG [Acidobacterium capsulatum ATCC
51196]
gi|225793108|gb|ACO33198.1| ATP-dependent DNA helicase RecG [Acidobacterium capsulatum ATCC
51196]
Length = 775
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 194/541 (35%), Positives = 270/541 (49%), Gaps = 92/541 (17%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN--AQIDLDDGQYFIFIG 264
LD + V G+ R+ L G T+ LL H P Y D + A +DL G+ I
Sbjct: 4 LDTEVQFVKGVGPRIAAALAEKGIRTVDDLLLHLPFRYEDRLHPRALMDLVPGEMASVIA 63
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
E+ + ++ + E+ VG + T+ + + +F GT
Sbjct: 64 EVRGTILLRT-RNMPIFEMTVG------QGTTAMKCI----------------WFHGT-- 98
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVL---KDEDDLSLRAKGR 381
+LK + + G+ V + GKV RS +++M + ++VL KD++D L GR
Sbjct: 99 ----YLKD---RFQAGQTVALFGKVEPSRSTKNFKMIQPQVEVLREGKDQEDEMLEV-GR 150
Query: 382 PYPIYPSKGG--LNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQP 438
P+Y S GG L+ +R + L+ + N + +P+ + GL +A +H P
Sbjct: 151 ITPVYESLGGSQLSTRWIRRVLFHLLREIEGNVPETLPRSLLLRLGLPSREEALKLVHFP 210
Query: 439 KHIDE-------ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQF-EKEGLLDKYRKPRLN 490
A A KRLIF+E FYL+LG LE +F E++GL +R
Sbjct: 211 AAGTAVSTLQGWATPAHKRLIFEELFYLELG-----LELKRRKFHERQGL--PFRA---- 259
Query: 491 AAYMEGWSSLTKKLLRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVA 549
+ LRA LP+ T++Q A+ EI+ D++QP PM RLLQGDVG GKT+VA
Sbjct: 260 -------DDKVRAALRAILPFHPTAAQKRALGEIVADMRQPRPMRRLLQGDVGSGKTIVA 312
Query: 550 FLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSR 609
A + + +GYQAA M PTE+LATQHY +LL E+ K +I LLTGS R
Sbjct: 313 VQAMVIAMENGYQAALMAPTEILATQHYLAARRLL---EKSKRPYRIVLLTGSLDEGVKR 369
Query: 610 MIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSS 669
R + G+ LVIGTH+LI EKVEF+ L L +VDEQ RFGV+QR R K
Sbjct: 370 ANRGKIYRGEADLVIGTHALIEEKVEFANLGLIVVDEQHRFGVLQRFRLMKK-------- 421
Query: 670 GMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYI 729
P VLAM+ATPIPRTLAL+LYGD+ L+ I +LPPGR PI T
Sbjct: 422 -------------PNQAEPDVLAMTATPIPRTLALSLYGDLDLSVIDELPPGRTPIVTRR 468
Query: 730 I 730
I
Sbjct: 469 I 469
>gi|392960633|ref|ZP_10326100.1| ATP-dependent DNA helicase RecG [Pelosinus fermentans DSM 17108]
gi|421054609|ref|ZP_15517575.1| ATP-dependent DNA helicase RecG [Pelosinus fermentans B4]
gi|421071472|ref|ZP_15532589.1| ATP-dependent DNA helicase RecG [Pelosinus fermentans A11]
gi|392440598|gb|EIW18271.1| ATP-dependent DNA helicase RecG [Pelosinus fermentans B4]
gi|392446991|gb|EIW24257.1| ATP-dependent DNA helicase RecG [Pelosinus fermentans A11]
gi|392454877|gb|EIW31691.1| ATP-dependent DNA helicase RecG [Pelosinus fermentans DSM 17108]
Length = 682
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 170/521 (32%), Positives = 248/521 (47%), Gaps = 82/521 (15%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFIGEIIS 268
I + G+ + + L G +T+ LL H+PR Y D ++ +L DGQ F +++
Sbjct: 9 IQYIKGVGPKKANLLTKLGIFTIGDLLEHYPRRYEDRSQLKMINNLTDGQVENFKARMMN 68
Query: 269 SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIP 328
K ++ VG ++T ++V + +KKIY
Sbjct: 69 CAESKPRRGLQITKITVG------DSTGTVQLVWFNQPHRKKIY---------------- 106
Query: 329 FLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPS 388
+G V V+GKV+ + E++ I+++ D D L G PIY +
Sbjct: 107 ---------GLGAEVLVTGKVKKIY---QVEIQNPEIEMITDMDTLE---AGYITPIYAA 151
Query: 389 KGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLAR 448
+ LR+ I + L A + +P I ++F LL A+ IH P ++D AR
Sbjct: 152 NESITQRFLRNLIRQILTEYNATAEILPPIIIKQFSLLDRKTAFENIHFPLNMDVLKQAR 211
Query: 449 KRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRAL 508
+RL+F+E + LQ G LY + K + L KK+ L
Sbjct: 212 RRLVFEELYLLQCGLLY---------------IKKQNRSNTIGIKHGPDGCLVKKVSEQL 256
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
P+SLT Q + EI D++ PM RLLQGDVG GKTV+A LA + + +GYQ A MVP
Sbjct: 257 PFSLTEDQQKVLLEIALDMEDTKPMQRLLQGDVGSGKTVIAALALAKTVENGYQGAMMVP 316
Query: 569 TELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHS 628
TE+LA QHY L L + ++ +LTG P + + D+++G + +VIGTH+
Sbjct: 317 TEILAEQHYSTLSNLFLPL-----GIRVKILTGKLPKRTHEQVVADIKSGLVDVVIGTHA 371
Query: 629 LIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAP 688
LI E VEF L L I DEQ RFGV QR + K G+ P
Sbjct: 372 LIQESVEFQYLGLVITDEQHRFGVRQRAKLQEK----------------GN-------MP 408
Query: 689 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYI 729
VL M+ATPIPRT+AL +YGD+ ++ I LPPGR IKTY+
Sbjct: 409 DVLVMTATPIPRTMALTVYGDLDVSTIKQLPPGRKIIKTYV 449
>gi|449124608|ref|ZP_21760927.1| ATP-dependent DNA helicase RecG [Treponema denticola OTK]
gi|448942939|gb|EMB23833.1| ATP-dependent DNA helicase RecG [Treponema denticola OTK]
Length = 678
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 147/363 (40%), Positives = 207/363 (57%), Gaps = 36/363 (9%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHID 442
P+YP GL + LR IA AL+ D +P+ I Q++GL + +H PK +
Sbjct: 145 PVYPLTSGLGQAKLRKIIASALKMYAHGIDSELPESILQKYGLPPKQEVLFMLHTPKSMA 204
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGT--QFEKEGLLDKY--RKPRLNAAYMEGWS 498
E + R LIF+EFF Q + +E G E E +DK ++P L +
Sbjct: 205 EVEKGRYALIFEEFFLFQYAIGMRSIERRGRLPNLEDERNIDKTVKKEPVL--------T 256
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
L LL L + LT QLS +EI DL P PM RL+QGDVG GKT+VAFLAC++VI
Sbjct: 257 PLQSSLLERLNFKLTQDQLSVCAEINEDLDGPNPMARLMQGDVGSGKTLVAFLACLKVIE 316
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
G AF+ PTELLA QH E+ +LL+ + ++A LTG+T K + ++LQ G
Sbjct: 317 QGGLTAFLAPTELLARQHAENAARLLEPL-----GIRLAFLTGNTKAKGRSRLLQELQKG 371
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+I L+IGTHSL ++ V++ LRL ++DEQ RFGV+QR + + G
Sbjct: 372 NIDLIIGTHSLFSQGVQYKNLRLVVIDEQHRFGVLQR----------------SAIIQKG 415
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYE 738
+ +++ M+PH+L MSATPIPRTLAL+++GD+ ++ I +PPGR PI TY+ E E
Sbjct: 416 AESNEEKMSPHLLMMSATPIPRTLALSIFGDLDISTIKTMPPGRKPIITYV--AGEDKAE 473
Query: 739 NVY 741
VY
Sbjct: 474 RVY 476
>gi|123966061|ref|YP_001011142.1| ATP-dependent DNA helicase RecG [Prochlorococcus marinus str. MIT
9515]
gi|123200427|gb|ABM72035.1| ATP-dependent DNA helicase recG [Prochlorococcus marinus str. MIT
9515]
Length = 818
Score = 246 bits (627), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 165/527 (31%), Positives = 264/527 (50%), Gaps = 77/527 (14%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
IS + + K +L G + ++ L+++FPRTY D N +
Sbjct: 127 ISLIKSIGKVTKKKLNELGIFNIKDLINYFPRTYLDYTNR----------------VKIV 170
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNI---DSGQKKKIYLHLKKFFRGTRFTSI 327
+K ++ + I I ++ S ++NI D K+ KFF G R+ S
Sbjct: 171 NLKPDNLYTCIATIKKFSIYKSQNNSNLSIMNIVIFDETSSIKV----TKFFLGKRYRSY 226
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYP 387
F S + + G + +SGKV+ ++ + I++L + D+ S G+ P+Y
Sbjct: 227 SFYTSQKSLYIPGTKIAISGKVKLSEYGKNF--IDPQIEILNNNDE-SFNFSGKIMPLY- 282
Query: 388 SKGGLNASLLRDTIARALQALPANFDPVPKEITQE----FGLLCLFDAYMGIHQPKHIDE 443
L+ S + + ++ + P +TQ+ LL D+ + IH P + D
Sbjct: 283 ---SLSESFSNISFIKLIKKVIIYSKDYPDLLTQKQISSLSLLPKSDSLINIHLPPNQDA 339
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
++KRL+FDE F LQ+ L + K K N + + L +
Sbjct: 340 LIESKKRLVFDELFLLQMKFLLRK--------------RKNNKKSTNRTFAQK-RFLLQD 384
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
L +P+ LT SQ + EI D+ PM+RLLQGDVG GKT++A ++ + ++ Q
Sbjct: 385 FLNKIPFQLTKSQEKVLDEIKLDISDLTPMSRLLQGDVGSGKTIIAIVSLLIILEKDQQG 444
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A MVPTE+LA QHY++LLK L+ + + LLTG+TP K+ + I +L+ G + ++
Sbjct: 445 ALMVPTEVLANQHYKNLLKYLNPLS-----VSVELLTGNTPQKKRKEILINLKNGMVDIL 499
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GTH+L +KV F++L + ++DEQ RFGV QR R +K D +
Sbjct: 500 VGTHALFEDKVIFNSLGMVVIDEQHRFGVTQRNRLLNK--------------GDNT---- 541
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
++L+M+ATPIPRTLAL+LYGD+ ++QIT+LPPGR+PI T II
Sbjct: 542 -----NLLSMTATPIPRTLALSLYGDLDISQITELPPGRVPIITKII 583
>gi|269837932|ref|YP_003320160.1| ATP-dependent DNA helicase RecG [Sphaerobacter thermophilus DSM
20745]
gi|269787195|gb|ACZ39338.1| ATP-dependent DNA helicase RecG [Sphaerobacter thermophilus DSM
20745]
Length = 824
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 178/541 (32%), Positives = 258/541 (47%), Gaps = 98/541 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L ++ +PG+ + QLE G T+ LL+ PR + D + I I
Sbjct: 141 LTDPVTTLPGVGAQRAKQLEALGVRTVEDLLYLTPRRHKD-------------YSRIEPI 187
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
SS C+ V + + T T + D+G + I+ +
Sbjct: 188 GSSLFFNRECTIKGTVVSIDQQRTRTGKTMVVAEIADDTGSVQAIWFN------------ 235
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
P+L + G + VSG++ R +R ++L D + GR PIY
Sbjct: 236 -PYLAR---QLHPGLPIAVSGRIE--RQRGTLVLRNPEWELL----DAEMLHTGRLVPIY 285
Query: 387 PSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
P GL +R AL A DP+P+EI Q GLL L A +H P +
Sbjct: 286 PLTRGLYQKQVRTLTRMALDAAAHLIADPLPEEIRQRHGLLPLAQALEAVHYPDSEADER 345
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLL 505
AR+RL FDEF LQ+G + + +E W + T
Sbjct: 346 AARRRLAFDEFLVLQIGLVQRKVE---------------------------WQAQTGHAF 378
Query: 506 R-----------ALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACM 554
R LP++LT++Q A+ EI+ D+ P P +RLLQGDVG GKTVVA A +
Sbjct: 379 RIDEELLATFEDRLPFTLTAAQSRALGEILADMASPRPASRLLQGDVGSGKTVVAAAAAL 438
Query: 555 EVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKD 614
+ G+QAA + PTE+LA QH + L D + E++ +P++ALLTGSTP + I
Sbjct: 439 VAVADGFQAAILAPTEILAEQHARNFASLYDVLPEER-RPRLALLTGSTPAGEREEIDAG 497
Query: 615 LQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMV 674
L++G I ++IGTH+++ E+VEF+ L LA++DEQ RFGVVQR R +K Y
Sbjct: 498 LRSGTIDILIGTHAILEERVEFARLGLAVIDEQHRFGVVQRARLRAKGYN---------- 547
Query: 675 NSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
P VL M+ATPIPR+LAL L+GD+ ++ I +LPPGR I T+ IEG+
Sbjct: 548 -------------PDVLVMTATPIPRSLALVLHGDLDVSIIDELPPGRQKIATHWIEGDR 594
Query: 735 K 735
+
Sbjct: 595 R 595
>gi|148242370|ref|YP_001227527.1| ATP-dependent DNA helicase RecG [Synechococcus sp. RCC307]
gi|147850680|emb|CAK28174.1| ATP-dependent DNA helicase [Synechococcus sp. RCC307]
Length = 836
Score = 245 bits (626), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 172/529 (32%), Positives = 262/529 (49%), Gaps = 62/529 (11%)
Query: 208 DKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEII 267
D +S + G+ +L +L G + L L+ ++PR Y D ++
Sbjct: 139 DLPLSELKGIGPKLATRLAQLGLFCLEDLIGYYPRDYVD----------------YSRLV 182
Query: 268 SSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ + G + + + + + ++ + Q L + KF G RFTS
Sbjct: 183 RIQALVPGETATVVATVRRVHAFASPKNPNLAILELQL-QDPSGRLRISKFMAGKRFTSS 241
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKD-EDDLSLRAKGRPYPIY 386
+L + + G + SG V+ R + + ++VL+ + GR PIY
Sbjct: 242 GWLHQQQRLYPPGATIAASGLVKENRFG--ISLHDPLLEVLEGPASQVQSPEIGRLVPIY 299
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL 446
GL A LR +A AL A+ DP+P+ Q+ L+ DA GIHQP + + D
Sbjct: 300 ALTEGLTAERLRQAVAAALAAVRPGPDPLPEPWRQQLTLVAKADARSGIHQPSNREHLDA 359
Query: 447 ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLR 506
R+RL+FDEF LQL + L+ + + P + A + K
Sbjct: 360 CRRRLVFDEFLLLQLNLAQRRLQ-----------YRQRQAPAVPAGAI---GERLKAFRN 405
Query: 507 ALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFM 566
LP+ T +Q ++E++ D+ QP PM RL+QGDVG GKTVVA A + I +G Q AFM
Sbjct: 406 LLPFQFTGAQERVLNELLADMGQPKPMARLVQGDVGSGKTVVAIAALLAAIDAGLQGAFM 465
Query: 567 VPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGT 626
PTE+LA QHY L + + + + +ALLTGSTP KQ R + +DL G + L++GT
Sbjct: 466 APTEVLAQQHYAKLCEWMPQLHVN-----VALLTGSTPAKQRRALLQDLANGQLHLLVGT 520
Query: 627 HSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHM 686
H+++ + V+F+ L L +VDEQ RFGV QR R SK +
Sbjct: 521 HAVLEDPVDFARLGLVVVDEQHRFGVGQRNRLLSK-----------------------GL 557
Query: 687 APHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
PH+L M+ATPIPRTLAL+++GD+ ++QI LPPGR PIKT ++ ++
Sbjct: 558 QPHLLTMTATPIPRTLALSIHGDLDVSQIDALPPGRQPIKTAVLSSAQR 606
>gi|88808500|ref|ZP_01124010.1| ATP-dependent DNA helicase RecG [Synechococcus sp. WH 7805]
gi|88787488|gb|EAR18645.1| ATP-dependent DNA helicase RecG [Synechococcus sp. WH 7805]
Length = 831
Score = 245 bits (626), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 179/574 (31%), Positives = 277/574 (48%), Gaps = 95/574 (16%)
Query: 176 AWPSLYPALPNESSTSSEVGSLPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRK 235
A P L A + ++ ++ G +P LD +S V G+ + +L + G +R
Sbjct: 109 APPKLKVATSSPAAPATHHGIMP--------LDAPLSRVRGIGPKQAERLASLGLLVVRD 160
Query: 236 LLHHFPRTYADLQN-AQID-LDDGQYFIFIGEIISSRGMKA--GCSFSFLEVIVGCEIAD 291
LL H+PR Y D +I+ L G+ + + G + + S LE+ +
Sbjct: 161 LLLHYPRDYVDYSALRRIEALVPGETATIVATVRRCHGFTSPRNPNLSILELQL------ 214
Query: 292 TETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRA 351
Q + + +F G RF++ +L + G V VSG V+
Sbjct: 215 ---------------QDPTGRIKVSRFLAGRRFSNPSYLHGQTRLYPNGATVAVSGLVK- 258
Query: 352 MRSNNHYEM--REYNIDVLKD-EDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQAL 408
+ Y + ++ I+V++ + L + GR P+Y GL A R + AL ++
Sbjct: 259 ---DGPYGLSFQDPLIEVMESAQAPLQSKRIGRLLPVYSLTEGLTADRFRTLVEAALPSV 315
Query: 409 PANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQML 468
+P+P + Q LL A IH+P+ ++ AR RL+FDEF LQLG + +
Sbjct: 316 RLWPEPLPPQRRQARQLLDRHQALTAIHRPETSEQLQQARHRLVFDEFLLLQLGLMQRRA 375
Query: 469 E-------GLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAIS 521
L +++GLL ++ L LP+ T +Q ++
Sbjct: 376 ALRQRAAPSLRIASDRDGLLARF--------------------LDNLPFQFTGAQTRVLA 415
Query: 522 EIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLL 581
EI DL++ PM RL+QGDVG GKTVVA A ++ I +G+Q A M PTE+LA QHY L
Sbjct: 416 EIDEDLERSEPMARLVQGDVGSGKTVVAVAALLKAIQAGWQGAMMAPTEVLAEQHYRSLC 475
Query: 582 KLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRL 641
+ L + + LLTGSTP+K+ R + D+ +G +++GTH+L+ + V F L L
Sbjct: 476 QWLPPLHV-----TVELLTGSTPLKKRRQLLADVASGGCKVLVGTHALLEDPVAFERLGL 530
Query: 642 AIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRT 701
+VDEQ RFGV QR R K + PH+L M+ATPIPRT
Sbjct: 531 VVVDEQHRFGVRQRNRLLGK-----------------------GLQPHLLTMTATPIPRT 567
Query: 702 LALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
LAL+L+GD+ ++QI +LPPGR PI T ++ G+E+
Sbjct: 568 LALSLHGDLDVSQIDELPPGRTPILTTMLAGSER 601
>gi|157413185|ref|YP_001484051.1| ATP-dependent DNA helicase RecG [Prochlorococcus marinus str. MIT
9215]
gi|157387760|gb|ABV50465.1| ATP-dependent DNA helicase recG [Prochlorococcus marinus str. MIT
9215]
Length = 817
Score = 245 bits (626), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 168/526 (31%), Positives = 258/526 (49%), Gaps = 75/526 (14%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN--AQIDLDDGQYFIFIGEI-- 266
+S + + K ++L G + ++ L+++FPRTY D N I+L + I I
Sbjct: 126 VSLIKNVGKVYKNKLNELGIFHIKDLINYFPRTYLDYTNRVKIINLKPDNLYTCIANIKR 185
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
K + S + +V E + + T KFF G RF S
Sbjct: 186 FYIHKSKKNSNLSIMNFVVSDETSSIKVT---------------------KFFLGRRFRS 224
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
F S + + G + +SGKV+ + + I++LK +D + G+ P+Y
Sbjct: 225 YSFFSSQKSLYTPGTKLAISGKVKLTEYGKTF--VDPQIEILKGIND-NFNYSGKILPLY 281
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL 446
L+ + + L + + K+ LL ++ + IH P
Sbjct: 282 SLGEALSNMSFIKLMKKVLIYAKQYPEILNKKQLDSLSLLSKGESLINIHFPLTQQALLE 341
Query: 447 ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLN--AAYMEGWSSLTKKL 504
++KRL+FDE F LQ+ L + RK N + + SL K+
Sbjct: 342 SKKRLVFDELFLLQIK-----------------FLLRKRKTNKNVISQQLPQKKSLLKEF 384
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
L P+ LT SQ + ++EI DL +PM+RLLQGDVG GKT++A + + VI Q A
Sbjct: 385 LNTFPFELTKSQENVLNEIKKDLSNALPMSRLLQGDVGSGKTIIAIASLLLVIEKNQQGA 444
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
F+VPTE+LA QHY++LLK LD + + LLTG+TP K+ + I +L G + +++
Sbjct: 445 FLVPTEVLAEQHYKNLLKYLDPL-----LVSVELLTGNTPQKKRKEIFSNLNNGLVDILV 499
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+L +KV F+AL + ++DEQ RFGV QR R +K T++
Sbjct: 500 GTHALFEDKVIFNALGMVVIDEQHRFGVSQRNRLLNKGENTNL----------------- 542
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
L+M+ATPIPRTLAL++YGD+ ++QIT+LPPGR+PI T II
Sbjct: 543 ------LSMTATPIPRTLALSIYGDLDVSQITELPPGRVPITTKII 582
>gi|449119113|ref|ZP_21755512.1| ATP-dependent DNA helicase RecG [Treponema denticola H1-T]
gi|449121504|ref|ZP_21757851.1| ATP-dependent DNA helicase RecG [Treponema denticola MYR-T]
gi|448950103|gb|EMB30926.1| ATP-dependent DNA helicase RecG [Treponema denticola MYR-T]
gi|448951039|gb|EMB31855.1| ATP-dependent DNA helicase RecG [Treponema denticola H1-T]
Length = 678
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 146/363 (40%), Positives = 206/363 (56%), Gaps = 36/363 (9%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHID 442
P+YP GL + LR IA AL+ D +P I +++GL + +H PK +
Sbjct: 145 PVYPLTSGLGQAKLRKIIASALKMYGQGIDSELPDSILKKYGLPPKQEVLFMLHAPKSMA 204
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGT--QFEKEGLLDKY--RKPRLNAAYMEGWS 498
E + R LIF+EFF Q + +E G E E + K ++P L +
Sbjct: 205 EVEKGRYALIFEEFFLFQYAIGMRSIERRGRLPNLEDESNIGKTVKKEPVL--------T 256
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
L LL L + LT QLS +EI DL P PM RL+QGDVG GKT+VAFLAC++VI
Sbjct: 257 PLQSSLLERLNFKLTQDQLSVCAEINEDLDGPNPMARLMQGDVGSGKTLVAFLACLKVIE 316
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
G Q AF+ PTELLA QH E+ +LL+ + ++A LTG+T K + ++LQ G
Sbjct: 317 QGGQTAFLAPTELLARQHAENAARLLEPL-----GIRLAFLTGNTKAKGRSRLLQELQKG 371
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+I L+IGTHSL ++ V++ LRL ++DEQ RFGV+QR + + G
Sbjct: 372 NIDLIIGTHSLFSQGVQYKNLRLVVIDEQHRFGVLQR----------------SAIIQKG 415
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYE 738
+ +++ M+PH+L MSATPIPRTLAL+++GD+ ++ I +PPGR PI TY+ E E
Sbjct: 416 AESNEEKMSPHLLMMSATPIPRTLALSIFGDLDISTIKTMPPGRKPIITYV--AGEDKAE 473
Query: 739 NVY 741
VY
Sbjct: 474 RVY 476
>gi|422341135|ref|ZP_16422076.1| ATP-dependent DNA helicase RecG [Treponema denticola F0402]
gi|325474706|gb|EGC77892.1| ATP-dependent DNA helicase RecG [Treponema denticola F0402]
Length = 678
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 147/371 (39%), Positives = 207/371 (55%), Gaps = 52/371 (14%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHID 442
P+YP GL + LR IA AL+ D +P I +++GL + +H PK +
Sbjct: 145 PVYPLTSGLGQAKLRKIIASALKMYGQGIDSELPDSILKKYGLPPKQEVLFMLHAPKSMA 204
Query: 443 EADLARKRLIFDEFFYLQL----------GRLYQMLE--GLGTQFEKEGLLDKYRKPRLN 490
E + R LIF+EFF Q GRL + + +G F+KE +L
Sbjct: 205 EVEKGRYALIFEEFFLFQYAIGMRSIERRGRLPNLEDESNIGKTFKKEPVL--------- 255
Query: 491 AAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAF 550
+ L LL L + LT QLS +EI DL P PM RL+QGDVG GKT+VAF
Sbjct: 256 -------TPLQSSLLERLNFKLTQDQLSVCAEINEDLDGPNPMARLMQGDVGSGKTLVAF 308
Query: 551 LACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRM 610
LAC++VI G Q AF+ PTELLA QH E+ +LL+ + ++A LTG+T K
Sbjct: 309 LACLKVIEQGGQTAFLAPTELLARQHAENAARLLEPL-----GVRLAFLTGNTKAKGRSR 363
Query: 611 IRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSG 670
+ ++LQ G+I L+IGTHSL ++ V++ LRLA++DEQ RFGV+QR
Sbjct: 364 LLQELQKGNIDLIIGTHSLFSQGVQYKNLRLAVIDEQHRFGVLQR--------------- 408
Query: 671 MAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+ + G+ +++ +PH+L MSATPIPRTLAL+++GD+ ++ I +PPGR PI TY+
Sbjct: 409 -SAIIQKGAESNEEKKSPHLLMMSATPIPRTLALSIFGDLDISTIKTMPPGRKPIITYV- 466
Query: 731 EGNEKGYENVY 741
E E VY
Sbjct: 467 -AGEDKAERVY 476
>gi|429759578|ref|ZP_19292076.1| ATP-dependent DNA helicase RecG [Veillonella atypica KON]
gi|429179539|gb|EKY20786.1| ATP-dependent DNA helicase RecG [Veillonella atypica KON]
Length = 680
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 173/531 (32%), Positives = 268/531 (50%), Gaps = 83/531 (15%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN--AQIDLDDGQYFIFIG 264
+++ ++ + G+ QL G T+ LL +FPR+Y D + + +L+ G +G
Sbjct: 1 MNEALTSIKGIGPGREKQLHKLGIDTVSNLLAYFPRSYEDRRKIYSIKELETGITAGVVG 60
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
++S + S LEVI+ T+ T ++V + G KK Y +G R
Sbjct: 61 TVVSITEKRPRPRLSILEVII------TDGTGPMKIVLFNQGYKKNFYK------KGQRL 108
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ GK EF S ++ N ++ D + D + P
Sbjct: 109 YAY-------GK---AEFQYGSMQM------NSPQIENLGPDAMPDTGIV---------P 143
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
IYP G++ ++R +I +A A + +P EI + +DA+ +H P +
Sbjct: 144 IYPLVDGVSQYVVRASIRNWFEAHHAMDEILPPEIMNYHASMKRYDAFKEMHFPSSSERH 203
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
+ AR +L ++E F +Q GL KE + P++N ++G +L ++
Sbjct: 204 EKARYQLAYEELFIMQ--------SGLALLRNKEQC---HVGPKMN---LDG--TLMEQC 247
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
LP+ LT Q A++EI D++ PM RLLQGDVG GKTVVA L+ ++ + +GYQA
Sbjct: 248 RTNLPFQLTGDQERAVTEISQDMQDERPMQRLLQGDVGSGKTVVATLSLVKAVENGYQAV 307
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
M PTE+LATQHYE + + + + IALLTGSTP K+ I ++L G I L+I
Sbjct: 308 IMAPTEILATQHYEGITEFCKTLPIN-----IALLTGSTPKKEKDRIYEELANGTIQLII 362
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+LI +KV+F L L I+DEQ RFGV QR K Y
Sbjct: 363 GTHALIQDKVQFKNLGLVIIDEQHRFGVNQRAALQHKGVY-------------------- 402
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
PHVL M+ATPIPRT+ L++YGD++++ I ++PPGR P+KTY+++ + K
Sbjct: 403 ---PHVLIMTATPIPRTMTLSVYGDLAVSLIKEMPPGRKPVKTYVVDSSYK 450
>gi|449104190|ref|ZP_21740931.1| ATP-dependent DNA helicase RecG [Treponema denticola AL-2]
gi|448963708|gb|EMB44384.1| ATP-dependent DNA helicase RecG [Treponema denticola AL-2]
Length = 678
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 146/363 (40%), Positives = 206/363 (56%), Gaps = 36/363 (9%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHID 442
P+YP GL + LR IA AL+ D +P I +++GL + H PK +
Sbjct: 145 PVYPLTSGLGQAKLRKIIASALKMYGQGIDSELPDSILKKYGLPPKQEVLFMFHAPKSMA 204
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGT--QFEKEGLLDKY--RKPRLNAAYMEGWS 498
E + R LIF+EFF Q + +E G E E + K ++P L +
Sbjct: 205 EVEKGRYALIFEEFFLFQYAIGMRSIERRGRLPNLEDESNIGKTVKKEPVL--------T 256
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
L + LL L + LT QLS +EI DL P PM RL+QGDVG GKT+VAFLAC++VI
Sbjct: 257 PLQRSLLERLNFKLTQDQLSVCAEINEDLDGPNPMARLMQGDVGSGKTLVAFLACLKVIE 316
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
G Q AF+ PTELLA QH E+ +LL+ + ++A LTG+T K + ++LQ G
Sbjct: 317 QGGQTAFLAPTELLARQHAENAARLLEPL-----GIRLAFLTGNTKAKGRSRLLQELQKG 371
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+I L+IGTHSL ++ V++ LRLA++DEQ RFGV+QR + + G
Sbjct: 372 NIDLIIGTHSLFSQGVQYKNLRLAVIDEQHRFGVLQR----------------SAIIQKG 415
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYE 738
+ +++ +PH+L MSATPIPRTLAL+++GD+ ++ I +PPGR PI TY+ E E
Sbjct: 416 AESNEEKRSPHLLMMSATPIPRTLALSIFGDLDISTIKTMPPGRKPIITYV--AGEDKAE 473
Query: 739 NVY 741
VY
Sbjct: 474 RVY 476
>gi|303228363|ref|ZP_07315197.1| ATP-dependent DNA helicase RecG [Veillonella atypica
ACS-134-V-Col7a]
gi|302516976|gb|EFL58884.1| ATP-dependent DNA helicase RecG [Veillonella atypica
ACS-134-V-Col7a]
Length = 680
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 173/535 (32%), Positives = 268/535 (50%), Gaps = 91/535 (17%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN--AQIDLDDGQYFIFIG 264
+++ ++ + G+ QL G T+ LL +FPR+Y D + + +L+ G +G
Sbjct: 1 MNEALTSIKGIGPGREKQLHKLGIDTVSNLLAYFPRSYEDRRKIYSIKELETGITAGVVG 60
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
++S + S LEVI+ T+ T ++V + G KK Y +G R
Sbjct: 61 TVVSITEKRPRPRLSILEVII------TDGTGPMKIVLFNQGYKKNFYK------KGQRL 108
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ GK EF S ++ N ++ D + D + P
Sbjct: 109 YAY-------GK---AEFQYGSMQM------NSPQIENLGPDAMPDTGIV---------P 143
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
IYP G++ ++R +I +A + +P EI + +DA+ +H P +
Sbjct: 144 IYPLVDGVSQYVVRASIRNWFEAHHTMDEILPPEIMNYHASMKRYDAFKEMHFPSSSERH 203
Query: 445 DLARKRLIFDEFFYLQLG-RLYQMLEG--LGTQFEKEG-LLDKYRKPRLNAAYMEGWSSL 500
+ AR +L ++E F +Q G L + E +G + E +G L+++YR
Sbjct: 204 EKARYQLAYEELFIMQSGLALLRNKEQCHVGPKMEPDGTLMEQYRT-------------- 249
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
LP+ LT Q A++EI D++ PM RLLQGDVG GKTVVA L+ ++ + +G
Sbjct: 250 ------NLPFQLTGDQERAVTEISQDMQDERPMQRLLQGDVGSGKTVVATLSLVKAVENG 303
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQA M PTE+LATQH+E + + N+ + IALLTGSTP K+ I ++L G I
Sbjct: 304 YQAVIMAPTEILATQHFEGITEFCKNLPIN-----IALLTGSTPKKEKDRIYEELANGTI 358
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
L+IGTH+LI +KV+F L L I+DEQ RFGV QR K Y
Sbjct: 359 QLIIGTHALIQDKVQFKNLGLVIIDEQHRFGVNQRAALQHKGVY---------------- 402
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
PHVL M+ATPIPRT+ L++YGD++++ I ++PPGR P+KTY+++ + K
Sbjct: 403 -------PHVLIMTATPIPRTMTLSVYGDLAVSLIKEMPPGRKPVKTYVVDSSYK 450
>gi|449108439|ref|ZP_21745082.1| ATP-dependent DNA helicase RecG [Treponema denticola ATCC 33520]
gi|448961520|gb|EMB42221.1| ATP-dependent DNA helicase RecG [Treponema denticola ATCC 33520]
Length = 678
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 146/363 (40%), Positives = 206/363 (56%), Gaps = 36/363 (9%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHID 442
P+YP GL + LR IA AL+ D +P I +++GL + +H PK +
Sbjct: 145 PVYPLTSGLGQAKLRKIIASALKMYGQGIDSELPDSILKKYGLPPKQEVLFMLHAPKSMA 204
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGT--QFEKEGLLDKY--RKPRLNAAYMEGWS 498
E + R LIF+EFF Q + +E G E E + K ++P L +
Sbjct: 205 EVEKGRYALIFEEFFLFQYAIGMRSIERRGRLPNLEDESNIGKTVKKEPVL--------T 256
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
L LL L + LT QLS +EI DL P PM RL+QGDVG GKT+VAFLAC++VI
Sbjct: 257 PLQSSLLERLNFKLTQDQLSVCAEINEDLDGPNPMARLMQGDVGSGKTLVAFLACLKVIE 316
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
G Q AF+ PTELLA QH E+ +LL+ + ++A LTG+T K + ++LQ
Sbjct: 317 QGGQTAFLAPTELLARQHAENAARLLEPL-----GIRLAFLTGNTKAKGRSRLLQELQKE 371
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+I L+IGTHSL ++ V++ LRLA++DEQ RFGV+QR + + G
Sbjct: 372 NIDLIIGTHSLFSQGVQYKNLRLAVIDEQHRFGVLQR----------------SAIIQKG 415
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYE 738
+ +++ M+PH+L MSATPIPRTLAL+++GD+ ++ I +PPGR PI TY+ E E
Sbjct: 416 AESNEEKMSPHLLMMSATPIPRTLALSIFGDLDISTIKTMPPGRKPIITYV--AGEDKAE 473
Query: 739 NVY 741
VY
Sbjct: 474 RVY 476
>gi|449126429|ref|ZP_21762718.1| ATP-dependent DNA helicase RecG [Treponema denticola SP33]
gi|448947423|gb|EMB28268.1| ATP-dependent DNA helicase RecG [Treponema denticola SP33]
Length = 678
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 147/363 (40%), Positives = 204/363 (56%), Gaps = 36/363 (9%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHID 442
P+YP GL + LR IA AL+ D +P I Q++GL +H PK +
Sbjct: 145 PVYPLTSGLGQAKLRKIIASALKMYAHGIDSELPDSILQKYGLPPKQKVLFMLHAPKSMA 204
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGT--QFEKEGLLDKY--RKPRLNAAYMEGWS 498
E + R LIF+EFF Q + +E G E E + K ++P L
Sbjct: 205 EVEKGRYALIFEEFFLFQYAIGMRSIERRGRLPNLEDERNIGKTVKKEPVLR-------- 256
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
L LL L + LT QLS +EI DL P PM RL+QGDVG GKT+VAFLAC++VI
Sbjct: 257 PLQSSLLERLNFKLTQDQLSVCAEINEDLDGPNPMARLMQGDVGSGKTLVAFLACLKVIE 316
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
G Q AF+ PTELLA QH E+ +LL+ + ++A LTG+T K + ++LQ G
Sbjct: 317 QGGQTAFLAPTELLARQHAENAARLLEPL-----GIRLAFLTGNTKAKGRSRLLQELQKG 371
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+I L+IGTHSL ++ V++ LRLA++DEQ RFGV+QR + + G
Sbjct: 372 NIDLIIGTHSLFSQGVQYKNLRLAVIDEQHRFGVLQR----------------SAIIQKG 415
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYE 738
+ +++ +PH+L MSATPIPRTLAL+++GD+ ++ I +PPGR PI TY+ E E
Sbjct: 416 AESNEEKRSPHLLMMSATPIPRTLALSIFGDLDISTIKTMPPGRKPIITYV--AGEDKAE 473
Query: 739 NVY 741
VY
Sbjct: 474 RVY 476
>gi|326790886|ref|YP_004308707.1| ATP-dependent DNA helicase RecG [Clostridium lentocellum DSM 5427]
gi|326541650|gb|ADZ83509.1| ATP-dependent DNA helicase RecG [Clostridium lentocellum DSM 5427]
Length = 687
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 172/534 (32%), Positives = 254/534 (47%), Gaps = 92/534 (17%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN----AQIDLDDGQYFI 261
LL I+ + G+ ++ +L G YTL+ ++ H+PR Y D + A +LD+ Q +
Sbjct: 2 LLSDSINELKGVGDKVGDKLRKLGIYTLKDMIEHYPREYEDRRQITPLAACELDEPQNVL 61
Query: 262 FI---GEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKF 318
I+ +G K SF DE +I + F
Sbjct: 62 VTVCSKPQIAKKGNKILVSFRV----------------KDETSSI-----------MVTF 94
Query: 319 FRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRA 378
F G + F+ +GE + GK++ + EY K D L
Sbjct: 95 F-GQAYMRNNFV--------MGEKYLLYGKIKHKYGQLEMDSPEYQ----KVADPSKLGT 141
Query: 379 KGRPYPIYPSKGGLNASLLRDTIARAL-QALPANFDPVPKEITQEFGLLCLFDAYMGIHQ 437
+ PIYP+ L+ ++R I L + LP D +P+ I +++ L+ +A GIH
Sbjct: 142 VAKITPIYPTTQKLSQKVIRGLIEHCLNEVLPEVKDHLPERIIKQYHLVSKEEALRGIHF 201
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGW 497
PK + ARKRL+F+E F LQL LYQ+ T+
Sbjct: 202 PKDSEHFFEARKRLVFEELFMLQLS-LYQLKADFATKL---------------MGIAHDV 245
Query: 498 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
+S K + +LP+ LT +Q + EI+ D+K P MNRL+QGDVG GKTV+A ++ V+
Sbjct: 246 TSELKAFMASLPFELTGAQKRVMREIVGDMKSPYAMNRLVQGDVGSGKTVIAAISLFLVV 305
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
G+Q A M PTE+L QHYE + +++ ++ LLTGST KQ R + ++T
Sbjct: 306 KDGFQGALMAPTEVLVVQHYEFIKGIMEPF-----GIQVGLLTGSTTAKQKRELLAAIKT 360
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
+I +V+GTH+LI + VE L L I DEQ RFGV QR + K +
Sbjct: 361 NEIQIVVGTHALIEDNVEIPNLGLVITDEQHRFGVRQRLKLTEKGHL------------- 407
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P V+ M+ATPIPRTLAL LYGDM ++ I +LPPGR PI+T ++
Sbjct: 408 ----------PDVMVMTATPIPRTLALILYGDMDISIIDELPPGRQPIRTNAVD 451
>gi|449129606|ref|ZP_21765836.1| ATP-dependent DNA helicase RecG [Treponema denticola SP37]
gi|448945654|gb|EMB26524.1| ATP-dependent DNA helicase RecG [Treponema denticola SP37]
Length = 678
Score = 242 bits (618), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 146/363 (40%), Positives = 205/363 (56%), Gaps = 36/363 (9%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHID 442
P+YP GL + LR IA AL+ D +P I Q++ L + +H PK +
Sbjct: 145 PVYPLTSGLGQAKLRKIIASALKMYGQGIDSELPDSILQKYSLPPKQEVLFMLHAPKSMA 204
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGT--QFEKEGLLDKY--RKPRLNAAYMEGWS 498
E + R LIF+EFF Q + +E G E E + K ++P L +
Sbjct: 205 EVEKGRYALIFEEFFLFQYAIGMRSIERRGRLPNLEDESNIGKTVKKEPVL--------T 256
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
L LL L + LT QLS +EI DL P PM RL+QGDVG GKT+VAFLAC++VI
Sbjct: 257 PLQSSLLERLNFKLTQDQLSVCAEINEDLDGPNPMARLMQGDVGSGKTLVAFLACLKVIE 316
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
G Q AF+ PTELLA QH E+ +LL+ + ++A LTG+T K + ++LQ G
Sbjct: 317 QGGQTAFLAPTELLARQHAENAARLLEPL-----GIRLAFLTGNTKAKGRSRLLQELQKG 371
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+I L+IGTHSL ++ V++ LRLA++DEQ RFGV+QR + + G
Sbjct: 372 NIDLIIGTHSLFSQGVQYKNLRLAVIDEQHRFGVLQR----------------SAIIQKG 415
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYE 738
+ +++ +PH+L MSATPIPRTLAL+++GD+ ++ I +PPGR PI TY+ E E
Sbjct: 416 AESNEEKRSPHLLMMSATPIPRTLALSIFGDLDISTIKTMPPGRKPIITYV--AGEDKAE 473
Query: 739 NVY 741
VY
Sbjct: 474 RVY 476
>gi|303230783|ref|ZP_07317530.1| ATP-dependent DNA helicase RecG [Veillonella atypica
ACS-049-V-Sch6]
gi|302514543|gb|EFL56538.1| ATP-dependent DNA helicase RecG [Veillonella atypica
ACS-049-V-Sch6]
Length = 680
Score = 242 bits (618), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 172/531 (32%), Positives = 263/531 (49%), Gaps = 83/531 (15%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN--AQIDLDDGQYFIFIG 264
+++ ++ + G+ QL G + LL +FPR+Y D + + +L+ G +G
Sbjct: 1 MNEALTSIKGIGPGREKQLHKLGIDIVSNLLAYFPRSYEDRRKIYSIKELETGITAGVVG 60
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
++S + S LEVI+ T+ T ++V + G KK Y +G R
Sbjct: 61 TVVSITEKRPRPRLSILEVII------TDGTGPMKIVLFNQGYKKNFYK------KGQRL 108
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ GK EF S ++ N ++ D + D + P
Sbjct: 109 YAY-------GK---AEFQYGSMQM------NSPQIENLGPDAMPDTGIV---------P 143
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
IYP G++ ++R +I +A + +P EI + +DA+ +H P +
Sbjct: 144 IYPLVDGVSQYVVRASIRNWFEAHHTMDEILPTEIMNYHASMKRYDAFKEMHFPSSSESH 203
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
+ AR +L ++E F +Q GL KE Y P+ ME +L ++
Sbjct: 204 EKARYQLAYEELFIMQ--------SGLALLRNKEQC---YVGPK-----MEPDGTLMEQC 247
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
LP+ LT Q A++EI D++ PM RLLQGDVG GKTVVA L+ ++ + +GYQA
Sbjct: 248 RTNLPFQLTGDQERAVTEISQDMQDERPMQRLLQGDVGSGKTVVATLSLVKAVENGYQAV 307
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
M PTE+LATQHYE + + + + IALLTGSTP K+ I ++L G I L+I
Sbjct: 308 IMAPTEILATQHYEGITEFCKTLPIN-----IALLTGSTPKKEKDKIYEELANGTIQLII 362
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+LI +KV+F L L I+DEQ RFGV QR K Y
Sbjct: 363 GTHALIQDKVQFKNLGLVIIDEQHRFGVNQRAALQHKGVY-------------------- 402
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
PHVL M+ATPIPRT+ L++YGD++++ I ++PPGR P+KTY+++ + K
Sbjct: 403 ---PHVLIMTATPIPRTMTLSVYGDLAVSLIKEMPPGRKPVKTYVVDSSYK 450
>gi|221632119|ref|YP_002521340.1| ATP-dependent DNA helicase RecG [Thermomicrobium roseum DSM 5159]
gi|221156495|gb|ACM05622.1| ATP-dependent DNA helicase RecG [Thermomicrobium roseum DSM 5159]
Length = 807
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 188/546 (34%), Positives = 277/546 (50%), Gaps = 79/546 (14%)
Query: 202 SIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFI 261
++EP D ++ +PG+ + QLE G T+R LL PR Y D +
Sbjct: 116 AVEP--DDPVTVLPGVGSQRARQLEALGVTTVRDLLFLVPRRYLDYTQ----------VV 163
Query: 262 FIGEI--ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFF 319
IG + + G + CS ++G E+ ET SG ++ + + L+
Sbjct: 164 PIGRLGRLVRPGEEVTCS------VIG-EVVQIETRE-------TSGGRRYVSVQLRDET 209
Query: 320 RGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAK 379
GT I F I + + G+ + VSG++ + E+ + + L
Sbjct: 210 -GT-IPVIWFNPYIARQLEAGQRIAVSGRLEGHGPYVRFRNPEW------EPAEAELLQA 261
Query: 380 GRPYPIYPSKGGLNASLLRDTIARALQ-ALPANFDPVPKEITQEFGLLCLFDAYMGIHQP 438
GR P+YP GL +R AL ALP DP+P + + L L A +H P
Sbjct: 262 GRIVPVYPLTQGLYQRQVRQLTRAALDLALPRLEDPLPPALRERNRLPSLAWALEQLHYP 321
Query: 439 KHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWS 498
+ + A+ AR+RL FDEF LQLG + + L + G+ ++ A++E
Sbjct: 322 ETLAAAERARRRLAFDEFLVLQLGLVQRRL----AWHAQAGIAIP-----IDRAFLE--- 369
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
L +LP+ LT +Q A+ EI+ DL +P PM+RLLQGDVG GKTVVA A + V
Sbjct: 370 ----TFLASLPFQLTGAQRRALEEILADLAEPHPMSRLLQGDVGSGKTVVAAAAALLVHR 425
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+GYQAA + PTE+LA QH+ L +L + +P +ALLTGSTP + I L +G
Sbjct: 426 AGYQAAILAPTEILAEQHFRTLTRLYHGL-PGGERPLVALLTGSTPERDRGSILAGLASG 484
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
I++++GTH+L+ E+V+F L LA++DEQ RFGV+QR SK
Sbjct: 485 TISIIVGTHALLEERVQFRRLALAVIDEQHRFGVLQRHTLRSK----------------- 527
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK--G 736
PHVL M+ATPIPR+LAL L+GD+ L+ I +LPPGR P+KTY++ G ++
Sbjct: 528 ------GENPHVLVMTATPIPRSLALVLHGDLDLSIIDELPPGRQPVKTYVVPGRKRTQA 581
Query: 737 YENVYK 742
YE V +
Sbjct: 582 YEFVRR 587
>gi|116074689|ref|ZP_01471950.1| putative DNA helicase [Synechococcus sp. RS9916]
gi|116067911|gb|EAU73664.1| putative DNA helicase [Synechococcus sp. RS9916]
Length = 844
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 181/546 (33%), Positives = 267/546 (48%), Gaps = 91/546 (16%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFI 263
+LD +S V G+ +L +L + G +R LL ++PR Y D + L+ G +
Sbjct: 144 VLDAPLSRVKGIGPKLAERLASLGLLLVRDLLLYYPRDYVDYSAMRRIEALEPGTTATIV 203
Query: 264 GEIISSRGMKA--GCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRG 321
+ G + + S LE+ V Q L + +F G
Sbjct: 204 ATVRRCHGFTSPRNPNLSILELQV---------------------QDPTGRLKVTRFLAG 242
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAK-- 379
RF+S L + ++ VG V +SG V++ ++ + I+VL+ +R+
Sbjct: 243 KRFSSPAALHTQTRQYPVGATVAISGLVKSGPYGLSFQ--DPLIEVLESAS-APVRSPQI 299
Query: 380 GRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPK 439
GR P+Y GL A LR +A L A +P+ + L+ A IH+PK
Sbjct: 300 GRLLPVYALTEGLAADRLRKLVALVLPAAQHWPEPLSADRRDALELMSRPLALDQIHRPK 359
Query: 440 HIDEADLARKRLIFDEFFYLQLG----------RLYQMLEGLGTQFEKEGLLDKYRKPRL 489
+ D AR+RL+FDEF LQLG R LEG+G +++GL+ ++
Sbjct: 360 NRDALQRARRRLVFDEFLLLQLGLMQRRAAHRQRQAPCLEGVG---QRDGLVGRF----- 411
Query: 490 NAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVA 549
L LP+ LT++Q ++EI DL + PM RL+QGDVG GKTVVA
Sbjct: 412 ---------------LSLLPFDLTAAQQRVLAEIEVDLAKAEPMARLVQGDVGSGKTVVA 456
Query: 550 FLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSR 609
A + + +G+Q A M PTE+LA QHY L + L + + LLTGST R
Sbjct: 457 VAALLNAVDAGWQGALMAPTEVLAEQHYRSLCQWLTPLHI-----SVELLTGSTSRPNRR 511
Query: 610 MIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSS 669
+ DL G + +++GTH+LI + V+FS L L +VDEQ RFGV QR R SK
Sbjct: 512 RMLTDLANGTLRILVGTHALIEDPVDFSRLGLVVVDEQHRFGVRQRNRLLSK-------- 563
Query: 670 GMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYI 729
+ PH+L M+ATPIPRTLAL+L+GD+ ++QI +LPPGR PI+T
Sbjct: 564 ---------------GLQPHLLTMTATPIPRTLALSLHGDLDVSQIDELPPGRTPIQTRQ 608
Query: 730 IEGNEK 735
I G+++
Sbjct: 609 ISGSDR 614
>gi|317969805|ref|ZP_07971195.1| ATP-dependent DNA helicase RecG [Synechococcus sp. CB0205]
Length = 811
Score = 241 bits (616), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 186/572 (32%), Positives = 281/572 (49%), Gaps = 76/572 (13%)
Query: 171 FGLSEAWPSLYPALPNESST-SSEVGSLPSEASIEPLLDKCISCVPGLSKRLYHQLENCG 229
F L +A + P P SSE P +I+P D +S V G+ + +L
Sbjct: 79 FELQKALQPVQPVSPPRLRLLSSESPGAPRSQTIQP--DTPLSEVRGVGPKSATRLAALD 136
Query: 230 FYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFIGEIISSRGMKA--GCSFSFLEVIV 285
+ R L+ ++PR Y D N L+ G+ + + S + + S LE+
Sbjct: 137 LWLARDLVRYYPRDYLDYANLVRIAGLEPGKTATIVATVRRSHSFTSPRNPNLSILEL-- 194
Query: 286 GCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCV 345
+AD +G+ + + KFF G RF+S +LK+ + + VG V +
Sbjct: 195 --HLADI------------TGR-----IRVSKFFAGKRFSSPAWLKAQQRNYPVGASVAI 235
Query: 346 SGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAK--GRPYPIYPSKGGLNASLLRDTIAR 403
SG V+ ++ + ++VL + + S+R+ GR P+Y GL A LR+ I
Sbjct: 236 SGLVKETPYGPAFQ--DPLMEVL-ESPNASVRSDQIGRLLPVYGLTEGLTADRLRNLIRP 292
Query: 404 ALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGR 463
+ A DP+P + GL+ L +A + IH P AR RL+FDEF L
Sbjct: 293 VVAAAGQWGDPLPASLQAREGLVPLPEALLQIHGPTSQASLSEARHRLVFDEFLLL---- 348
Query: 464 LYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEI 523
+ +P A +EG +L + L+ LP+ LT +Q ++EI
Sbjct: 349 ---------QLGLLQRRRQLTSRP-APALAVEG-DALLQAFLQLLPFPLTGAQQRVLAEI 397
Query: 524 IWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKL 583
DL++ PM RL+QGDVG GKTVVA A + I SG Q A M PTE+LA QHY L +
Sbjct: 398 RADLRRDQPMARLVQGDVGSGKTVVAIAALLTAIDSGCQGALMAPTEVLAEQHYRKLCEW 457
Query: 584 LDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAI 643
L + ALLTGSTP+++ R + DL G + +++GTH+L+ + V+F L L +
Sbjct: 458 LPQLHV-----TCALLTGSTPLRRRRELLADLANGTLKMLVGTHALLEDPVQFQRLGLVV 512
Query: 644 VDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLA 703
VDEQ RFGV QR R D+ + PH+L M+ATPIPRTLA
Sbjct: 513 VDEQHRFGVHQRNRLL-----------------------DKGLQPHLLTMTATPIPRTLA 549
Query: 704 LALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
L+++GD+ ++QI +LPPGR PI+T ++ ++
Sbjct: 550 LSIHGDLEVSQIDELPPGRTPIRTSLLASADR 581
>gi|421076076|ref|ZP_15537078.1| ATP-dependent DNA helicase RecG [Pelosinus fermentans JBW45]
gi|392525935|gb|EIW49059.1| ATP-dependent DNA helicase RecG [Pelosinus fermentans JBW45]
Length = 682
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 166/521 (31%), Positives = 247/521 (47%), Gaps = 82/521 (15%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFIGEIIS 268
I + G+ + + L G +T+ LL H+PR Y D ++ +L DGQ F +++
Sbjct: 9 IQYIKGVGPKKANLLTKLGIFTIGDLLEHYPRRYEDRSQLKMINNLTDGQVENFKARMMN 68
Query: 269 SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIP 328
K ++ VG ++T ++V + +KKIY
Sbjct: 69 CAESKPRRGLQITKITVG------DSTGTVQLVWFNQPHRKKIY---------------- 106
Query: 329 FLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPS 388
++G + V+GKV+ + E++ I+++ D D L G PIY +
Sbjct: 107 ---------RLGADILVTGKVKKIY---QVEIQNPEIEMITDVDTLE---AGYITPIYAA 151
Query: 389 KGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLAR 448
+ LR+ I + L + +P I +F LL A+ IH P ++D AR
Sbjct: 152 NESITQRFLRNLIRQILTECNTTTEILPPIIIDQFSLLDRKTAFENIHFPLNMDVLKQAR 211
Query: 449 KRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRAL 508
+RL+F+E + LQ G LY + K + L K++ L
Sbjct: 212 RRLVFEELYLLQCGLLY---------------IKKQNRSNTIGIKHGPDGRLVKQVREQL 256
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
P+SLT Q + EI D++ PM RLLQGDVG GKTV+A LA + + +GYQ A MVP
Sbjct: 257 PFSLTEDQQKVLLEIALDMEDAKPMQRLLQGDVGSGKTVIAALALAKTVENGYQGAMMVP 316
Query: 569 TELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHS 628
TE+LA QHY L L + ++ +LTG P + + ++++G + +VIGTH+
Sbjct: 317 TEILAEQHYTTLSDLFLPL-----GIRVKILTGKLPKRTHEQVVAEIKSGLVDVVIGTHA 371
Query: 629 LIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAP 688
LI E VEF L L I DEQ RFGV QR + K G+ P
Sbjct: 372 LIQESVEFQYLGLVITDEQHRFGVRQRAKLQKK----------------GN-------MP 408
Query: 689 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYI 729
VL M+ATPIPRT+AL +YGD+ ++ I LPPGR IKTY+
Sbjct: 409 DVLVMTATPIPRTMALTVYGDLDVSTIKQLPPGRKTIKTYV 449
>gi|390956128|ref|YP_006419885.1| RecG-like helicase [Terriglobus roseus DSM 18391]
gi|390411046|gb|AFL86550.1| RecG-like helicase [Terriglobus roseus DSM 18391]
Length = 774
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 183/540 (33%), Positives = 260/540 (48%), Gaps = 95/540 (17%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFIGEIIS 268
+ + G+ R L G T LL+H P Y D + + L G+ IGE+
Sbjct: 8 VQLIKGVGPRNAEALRKRGVETAEDLLYHLPFRYEDRLDPKPLSALKAGEMASVIGEVRG 67
Query: 269 SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIP 328
+ ++A S E+ VG + G K ++ FRGT
Sbjct: 68 TATLRA-RSMPIFEMTVGQGL----------------GTLKAMW------FRGT------ 98
Query: 329 FLKSIEGKHKVGEFVCVSGKVRAMRSN-NHYEMREYNIDVL---KDEDDLSLRAKGRPYP 384
+EGK + G+ V + GK+ + RS ++M + ++L +DE++ L GR P
Sbjct: 99 ---YLEGKFRPGQMVALYGKLESSRSTVGSFKMVQPQFEILPGPEDENEAVLLEVGRIVP 155
Query: 385 IYPSKGG-------LNASLLRDTIARALQALPAN---FDPVPKEITQEFGLLCLFDAYMG 434
+Y S GG L + +R + R L L A DPVP + + GL +A
Sbjct: 156 VYESLGGTTPWGAKLGSRWMRQVVWRLLDDLAAGPQLIDPVPHSLRKRLGLPGRLEALRA 215
Query: 435 IH-QPKHIDEADL------ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKP 487
H P DL RLIF+E FYL+LG + +++ L D
Sbjct: 216 AHFPPAGTGMGDLQAFTTPGHARLIFEELFYLELG----------LELKRKRLRD----- 260
Query: 488 RLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTV 547
R A+ ++ + + LP+ T++Q + EI+ D+++P PM RLLQGDVG GKT+
Sbjct: 261 RAGIAFTAD-DNVRNAIKQVLPFRPTAAQKRVLGEIVEDMRKPQPMRRLLQGDVGSGKTI 319
Query: 548 VAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQ 607
VA A + I GYQA M PTE+LATQHY KLL + + K+ LLTGS +
Sbjct: 320 VALEAALVAIEGGYQAVLMAPTEILATQHYLSARKLL---QRSSRQYKVTLLTGSLDEAE 376
Query: 608 SRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSM 667
R R+ + +GD L+IGT +LI KV+F+ L L IVDEQ RFGV QR +T M
Sbjct: 377 KRRARRRIASGDAELIIGTQALIQAKVDFANLGLVIVDEQHRFGVRQR--------FTLM 428
Query: 668 SSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
K D+ P VL M+ATPIPRTLAL +YGD+ ++ I +LPPGR PI T
Sbjct: 429 -------------KKDEATEPDVLVMTATPIPRTLALTIYGDLEVSVIDELPPGRSPIIT 475
>gi|159896821|ref|YP_001543068.1| ATP-dependent DNA helicase RecG [Herpetosiphon aurantiacus DSM 785]
gi|159889860|gb|ABX02940.1| ATP-dependent DNA helicase RecG [Herpetosiphon aurantiacus DSM 785]
Length = 832
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 188/584 (32%), Positives = 264/584 (45%), Gaps = 125/584 (21%)
Query: 205 PLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIG 264
P +D + + G+ G +TL LL+H P Y D + D + +G
Sbjct: 106 PPIDTLLKTLQGIGPSTARSFAKLGVHTLEDLLYHVPHRYDDFSKRKQICD-----LVVG 160
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
E + VIV + + G + V I G + +FRGT
Sbjct: 161 ETDT--------------VIVTVDAIKSFNAKGRQGVEITVGDDTGVLK--ASWFRGTWM 204
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ + G + +SGKV R ++ V EDDL GR P
Sbjct: 205 AK---------QFREGMRIVLSGKVSMFREMKSMSNPQWEPFV---EDDLV--HTGRLVP 250
Query: 385 IYPSKGGLNASLLRDTIARALQAL-PANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
++P GL R I R + A+ P DP+P E+ + GLL L A IH P
Sbjct: 251 VHPLTKGLQDRNARQVIKRVVDAVTPTLSDPLPIELRERAGLLPLGVAISQIHFPDSWAM 310
Query: 444 ADLARKRLIFDEFFYLQLG-----RLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWS 498
AR+RL FDEF Y+QLG RLYQ ++G F + + D Y
Sbjct: 311 VQRARQRLGFDEFLYIQLGVLQRKRLYQGVQGQPIAF-NQAIHDAY-------------- 355
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
L +LP++LT++Q +EI DL++PVPM RL+QGDVG GKT VA A ++ +
Sbjct: 356 ------LSSLPFALTNAQTRTFNEICRDLERPVPMTRLVQGDVGSGKTAVAAAALVQAVA 409
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDN-------------------------------- 586
+G+Q A M PTE+LA QHY L KLL N
Sbjct: 410 AGFQGAMMAPTEILAEQHYRGLKKLLANVKIPGRETNSNGDWRDELDQEKRNRLAQIKQL 469
Query: 587 -MEEDKHKP-----KIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALR 640
M D+ +P ++ALLTGS +Q R K + G++ ++IGTH+LI V++ AL
Sbjct: 470 LMLADEPEPEPGGIRVALLTGSLKARQRREALKLIADGEVDIIIGTHALIQANVDYQALG 529
Query: 641 LAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPR 700
LA+VDEQ RFGV QR K + PH+L M+ATPIPR
Sbjct: 530 LAVVDEQHRFGVEQREALKRKGFN-----------------------PHLLVMTATPIPR 566
Query: 701 TLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE--KGYENVYK 742
+LAL +YGD+ ++ I + PPGR PI+T I E K Y+++ K
Sbjct: 567 SLALTIYGDLDVSVIDERPPGRQPIRTKWISSGERSKAYKHMRK 610
>gi|302392174|ref|YP_003827994.1| ATP-dependent DNA helicase RecG [Acetohalobium arabaticum DSM 5501]
gi|302204251|gb|ADL12929.1| ATP-dependent DNA helicase RecG [Acetohalobium arabaticum DSM 5501]
Length = 793
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 188/579 (32%), Positives = 276/579 (47%), Gaps = 108/579 (18%)
Query: 175 EAWPSLYPALPNESSTSSEVGSLPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLR 234
E + SL + E+ + LP P+ K I V G+ K+ +L TLR
Sbjct: 83 ELFNSLSNLIQEETVEEDSMQRLP------PIWQKSIRYVKGVGKKRAEKLARLEIDTLR 136
Query: 235 KLLHHFPRTYADL-QNAQI-DLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADT 292
+L + PR Y D +N I +L G+++ S ++ + +VI+
Sbjct: 137 DMLFYIPRDYRDWSKNLPIRELSPDSEVTATGQVVDSTELRPRKGLTITKVIISDNTG-- 194
Query: 293 ETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKS-IEGKHKVGEFVCVSGKVRA 351
R + F +S I+ K K G V SG+V+
Sbjct: 195 ------------------------------RLAGVWFNQSYIKQKFKPGMAVSFSGEVKQ 224
Query: 352 -----MRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQ 406
++ HYE+ +D K+ D G+ P+Y + GL+ +LLR ++R L+
Sbjct: 225 EYGELQITHPHYEI----MDSDKELD------PGKILPVYSTTQGLSQNLLRKIVSRILK 274
Query: 407 A----LPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLG 462
P + P I ++ LL + +A IH P I E AR+RL F E F LQLG
Sbjct: 275 EHLDRFPESLSP---GIKDKYDLLDVKEALYKIHFPDQIREVKEARQRLAFGELFILQLG 331
Query: 463 RLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISE 522
L + + L E+EGL+ G L L LP+ LTS+Q +E
Sbjct: 332 ILLKKTDLLT---EEEGLVHT------------GSDELITNFLSDLPFELTSAQRRVWAE 376
Query: 523 IIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLK 582
I +L+ + MNRL+QGDVG GKTVVA LA ++ + SGYQ A M PTE+LA QHY L
Sbjct: 377 IKDNLESSIVMNRLVQGDVGSGKTVVATLALLKAVSSGYQGAMMAPTEILAEQHY---LS 433
Query: 583 LLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLA 642
L +++EE + +I LL GS + + + +++G++ +VIGTH+L+ E+V F+ L L
Sbjct: 434 LKESLEE--YGLQIGLLVGSLKKSERKEVIAGIESGEVDIVIGTHALLQEEVSFAKLGLV 491
Query: 643 IVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTL 702
I DEQ RFGV QR A++ G P VL M+ATPIPRTL
Sbjct: 492 ITDEQHRFGVRQR----------------AILKEKGE-------NPDVLVMTATPIPRTL 528
Query: 703 ALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVY 741
AL LYGD+ L+ I +LPPGR P+ T EK ++ ++
Sbjct: 529 ALTLYGDLDLSVIDELPPGRKPVITEW--RREKDFDKIF 565
>gi|449116821|ref|ZP_21753267.1| ATP-dependent DNA helicase RecG [Treponema denticola H-22]
gi|448953076|gb|EMB33872.1| ATP-dependent DNA helicase RecG [Treponema denticola H-22]
Length = 678
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 145/363 (39%), Positives = 205/363 (56%), Gaps = 36/363 (9%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHID 442
P+Y GL + LR IA AL+ D +P I +++GL + +H PK +
Sbjct: 145 PVYTLTSGLGQAKLRKIIASALKMYGQGIDSELPDSILKKYGLPPKQEVLFMLHAPKSMA 204
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGT--QFEKEGLLDKY--RKPRLNAAYMEGWS 498
E + R LIF+EFF Q + +E G E E + K ++P L +
Sbjct: 205 EVEKGRYALIFEEFFLFQYAIGMRSIERRGRLPNLEDESNIGKTVKKEPVL--------T 256
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
L LL L + LT QLS +EI DL P PM RL+QGDVG GKT+VAFLAC++VI
Sbjct: 257 PLQSSLLERLNFKLTQDQLSVCAEINEDLDGPNPMARLMQGDVGSGKTLVAFLACLKVIE 316
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
G Q AF+ PTELLA QH E+ +LL+ + ++A LTG+T K + ++LQ G
Sbjct: 317 QGGQTAFLAPTELLARQHAENAARLLEPL-----GVRLAFLTGNTKAKGRSRLLQELQKG 371
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+I L+IGTHSL ++ V++ LRLA++DEQ RFGV+QR + + G
Sbjct: 372 NIDLIIGTHSLFSQGVQYKNLRLAVIDEQHRFGVLQR----------------SAIIQKG 415
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYE 738
+ +++ +PH+L MSATPIPRTLAL+++GD+ ++ I +PPGR PI TY+ E E
Sbjct: 416 AESNEEKRSPHLLMMSATPIPRTLALSIFGDLDISTIKTMPPGRKPIITYV--AGEDKAE 473
Query: 739 NVY 741
VY
Sbjct: 474 RVY 476
>gi|33865627|ref|NP_897186.1| ATP-dependent DNA helicase RecG [Synechococcus sp. WH 8102]
gi|33632797|emb|CAE07608.1| ATP-dependent DNA helicase [Synechococcus sp. WH 8102]
Length = 836
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 166/534 (31%), Positives = 259/534 (48%), Gaps = 69/534 (12%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFIG 264
LD ++ + G+ +L +L G +R LL H+PR + D + L G+ +
Sbjct: 137 LDSPLTQLQGVGPKLAGRLAAIGLLLVRDLLKHYPRDHVDYATRRRIEALVVGETATIVA 196
Query: 265 EIISSRGMKA--GCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGT 322
I G + + S LE+ + Q + + +F G
Sbjct: 197 TIRRCNGFVSPRNPNLSILELQL---------------------QDPTGRIKVTRFLAGK 235
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDED-DLSLRAKGR 381
RF+S +LK + + G V VSG ++ ++ + I+VL+ + ++ R GR
Sbjct: 236 RFSSPAYLKGQQRLYPQGATVAVSGLIKEGPYGATFQ--DPLIEVLESSNAEVRSRNIGR 293
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
P+Y G+ A R I + L A DP+ + +++ L+ L +A+ G+H P
Sbjct: 294 LMPVYGLTEGVAADRFRQLIDQVLPLARAWPDPLNQTERRDWSLVSLPEAFQGLHAPDDP 353
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
+ D AR+RL+FDEF L ++P + L
Sbjct: 354 SQLDQARRRLVFDEFLLL-------------QLGLLRRRRTLSQRPCPQLELIRRGDGLV 400
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
K L +LP++ T++Q EI DL++ PM RL+QGDVG GKTVVA A + I SG+
Sbjct: 401 GKFLASLPFAFTAAQERVFGEIEADLQRSQPMARLVQGDVGSGKTVVAIAALLSTISSGW 460
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q A M PTE+LA QH+ +L + L + + LLTG+TP + R + DL G +
Sbjct: 461 QGALMAPTEVLAEQHHRNLCRWLPPLHV-----TVELLTGATPKTKRRQLLDDLANGSLK 515
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+++GTH+L+ + V FS L L +VDEQ RFGV QR R +K
Sbjct: 516 VLVGTHALLEDPVVFSRLGLVVVDEQHRFGVHQRDRLLNK-------------------- 555
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
+ PH+L M+ATPIPRTLAL+L+GD+ ++QI +LPPGR PI+T ++ ++
Sbjct: 556 ---GLQPHLLTMTATPIPRTLALSLHGDLDVSQIDELPPGRTPIRTAMLTAAQR 606
>gi|401679953|ref|ZP_10811877.1| ATP-dependent DNA helicase RecG [Veillonella sp. ACP1]
gi|400219080|gb|EJO49951.1| ATP-dependent DNA helicase RecG [Veillonella sp. ACP1]
Length = 680
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 172/531 (32%), Positives = 262/531 (49%), Gaps = 83/531 (15%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN--AQIDLDDGQYFIFIG 264
+++ ++ + G+ QL G T+ LL +FPR+Y D + + +L+ G +G
Sbjct: 1 MNEALTSIKGIGPGREKQLHKLGIDTVSNLLAYFPRSYEDRRKIYSIKELETGITAGVVG 60
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
++S + S LEVI+ T+ T ++V + G KK Y +G R
Sbjct: 61 TVVSITEKRPRPRLSILEVII------TDGTGPMKIVLFNQGYKKNFYK------KGQRL 108
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ GK EF S ++ N ++ D + D + P
Sbjct: 109 YAY-------GK---AEFQYGSMQM------NSPQIENLGPDAMPDTCIV---------P 143
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
IYP G++ ++R +I +A + +P EI + +DA+ +H P +
Sbjct: 144 IYPLVDGVSQYVVRASIRNWFEAHHTMDEILPPEIMNYHASMKRYDAFKEMHFPSSSERH 203
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
+ AR +L ++E F +Q GL KE + P+ ME L +
Sbjct: 204 EKARYQLAYEELFIMQ--------SGLALLRNKEQC---HVGPK-----MEPDGVLMAQC 247
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
LP+ LT Q A++EI D++ PM RLLQGDVG GKTVVA L+ ++ + +GYQA
Sbjct: 248 RSNLPFKLTGDQERAVTEISQDMQDERPMQRLLQGDVGSGKTVVATLSLVKAVENGYQAV 307
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
M PTE+LATQHYE + + + + IALLTGSTP K+ I ++L G I L+I
Sbjct: 308 IMAPTEILATQHYEGITEFCKTLPIN-----IALLTGSTPKKEKDRIYEELANGTIQLII 362
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+LI +KV+F L L I+DEQ RFGV QR K Y
Sbjct: 363 GTHALIQDKVQFKNLGLVIIDEQHRFGVNQRAALQHKGVY-------------------- 402
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
PHVL M+ATPIPRT+ L++YGD++++ I ++PPGR P+KTY+++ + K
Sbjct: 403 ---PHVLIMTATPIPRTMTLSVYGDLAVSLIKEMPPGRKPVKTYVVDSSYK 450
>gi|158320474|ref|YP_001512981.1| ATP-dependent DNA helicase RecG [Alkaliphilus oremlandii OhILAs]
gi|158140673|gb|ABW18985.1| ATP-dependent DNA helicase RecG [Alkaliphilus oremlandii OhILAs]
Length = 678
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 177/533 (33%), Positives = 259/533 (48%), Gaps = 96/533 (18%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFI 263
+LD+ I + G+ + + L T + ++ HFPR Y D N + L G+ F
Sbjct: 3 ILDRDIQYLKGVGPKKAYLLNKLNIKTFKDMIWHFPRDYEDRGNIRKIAQLIPGEKTTFY 62
Query: 264 GEIISSRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVV---NIDSGQKKKIYLHLKKFF 319
G I + K + S ++ IV E E ++V I SGQ+ I +KK F
Sbjct: 63 GYIYGEAEISKPKKNMSLIKFIVKDETGQVEIVFFNKVYLKKAITSGQRVMINGEVKKTF 122
Query: 320 RGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAK 379
+G + + P L+ I + + G V
Sbjct: 123 KGMQIVN-PVLEKINQEEEEGRHGIV---------------------------------- 147
Query: 380 GRPYPIYPSKGGLNAS----LLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGI 435
PIYPS GL+ + + RD I +++ + +P E+ ++ L + A I
Sbjct: 148 ----PIYPSTEGLSQNEILKIQRDMIRVVKESI---VEYLPDELIKKHKLCHIQFALENI 200
Query: 436 HQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYME 495
H P + +A+ RL+F+EF +LQLG L ++ T+ EKEG++ K + E
Sbjct: 201 HFPNSVKSLKIAKYRLVFEEFLFLQLGLL--KIKKDHTK-EKEGIVLKKK---------E 248
Query: 496 GWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
G ++ + +LP++LT++Q + EI DL++ +PMNRL+QGDVG GKT+VA +A +
Sbjct: 249 G----IEEFIESLPFTLTAAQDKVVKEICQDLERDIPMNRLVQGDVGSGKTIVAIIALFK 304
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
+ +GYQ A M PTE+LA QHY L LL + LL GS + I +
Sbjct: 305 AVINGYQGAMMAPTEILAEQHYLSLTDLLSPF-----GIHVGLLVGSLSKSEKNKILNGI 359
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
+TG+I +V+GTH+LI E V F+ L L I DEQ RFGV QR SK
Sbjct: 360 ETGEINIVVGTHALIQEGVNFANLSLVITDEQHRFGVRQRSTLTSK-------------- 405
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTY 728
G+ PHVL M+ATPIPRTLAL LYGD+ ++ I LPPGR IKTY
Sbjct: 406 --GN-------NPHVLVMTATPIPRTLALILYGDLDISIIDHLPPGRKCIKTY 449
>gi|33861313|ref|NP_892874.1| ATP-dependent DNA helicase RecG [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|33633890|emb|CAE19215.1| ATP-dependent DNA helicase recG [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 818
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 165/533 (30%), Positives = 263/533 (49%), Gaps = 73/533 (13%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN--AQIDLDDGQYFIFIG 264
L+ I + + K ++L G Y ++ ++++FPRTY D N I+L + I
Sbjct: 123 LNSDIGLIKSIGKINKNKLNELGIYCIKDIINYFPRTYLDYTNRVKIINLKPDNLYTCIA 182
Query: 265 EIISSRGMKA--GCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGT 322
+ K+ + S + +++ E + + T KFF G
Sbjct: 183 TVKKFYIYKSSNNSNLSIMNIVIFDETSSIKVT---------------------KFFLGK 221
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
RF S F S + + G + +SGKV+ ++ + I++L ++ S G+
Sbjct: 222 RFRSYSFFSSQKSLYIPGTKLAISGKVKLSEYGKNF--VDPQIEILNTNEE-SFNFSGKI 278
Query: 383 YPIYP-SKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
P+Y S+ N S +R I R + D + ++ L+ D+ + IH P +
Sbjct: 279 MPLYSLSESFSNLSFIR-LIKRVIIYSKQYPDILNQKQLNFLSLVSKSDSLINIHLPVNQ 337
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
+ ++KRL+FDE F LQ+ L L + +L + L
Sbjct: 338 NALIESKKRLVFDELFLLQMKFL---------------LRKRKNNKKLTIQKSIKKNFLL 382
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
K L +P+ LT SQ + EI DL PM+RLLQGDVG GKT++A + +
Sbjct: 383 KDFLNKVPFQLTKSQEKVLDEIKSDLSDLTPMSRLLQGDVGSGKTIIAIATLLIELEKDQ 442
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q A MVPTE+LATQHY++L++ L+ + + LLTG+TP K+ + I +L+ G +
Sbjct: 443 QGALMVPTEVLATQHYKNLIQFLNPL-----LVSVELLTGNTPQKKRKEILTNLKNGMVD 497
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+++GTH+L +KV F++L + ++DEQ RFGV QR R +K D +
Sbjct: 498 ILVGTHALFEDKVVFNSLGMVVIDEQHRFGVTQRNRLLNK--------------GDNT-- 541
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
++L+M+ATPIPRTLAL+LYGD+ ++QIT+LPPGR+PI T II E
Sbjct: 542 -------NLLSMTATPIPRTLALSLYGDLDISQITELPPGRVPITTKIISEEE 587
>gi|147678092|ref|YP_001212307.1| ATP-dependent DNA helicase RecG [Pelotomaculum thermopropionicum
SI]
gi|146274189|dbj|BAF59938.1| RecG-like helicase [Pelotomaculum thermopropionicum SI]
Length = 690
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 173/529 (32%), Positives = 246/529 (46%), Gaps = 90/529 (17%)
Query: 209 KCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIIS 268
K + + + +R L+ G T++ LL+HFPR Y D
Sbjct: 8 KPVQYLKMVGQRRASALQKLGIATVKDLLYHFPRRYDDR--------------------- 46
Query: 269 SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKK-----KIYLH-LKKFFRGT 322
+ L C + T G + D ++ K+ LH F
Sbjct: 47 ----------TVLRPAWACAQGEVATVGGTVLAAQDLKPRRGLTITKLALHDGSGTFYAV 96
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F PF+K G V V+GKV + EY D D LS GR
Sbjct: 97 WFNQ-PFIKK---NLPPGTRVFVTGKVEKGYGAVTVAVEEYEAD--DGRDRLS---TGRL 147
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
P+YP G L +LR + AL +A D +P+ + ++F L CL A +H P+++
Sbjct: 148 VPVYPLAGRLTQRMLRAMVKSALDEAKGKEADFLPESLLKKFNLPCLGTALSAVHFPQNM 207
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
+EA AR+R IF+E F QL + + G + +L+ EG LT
Sbjct: 208 EEAGAARRRFIFEELFLFQLALAMRRKDISGRR-------------KLHTYLPEG--KLT 252
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
+ +LPY LT Q EI D+ PVPM+RLLQGDVG GKTV++ LA ++ + SG
Sbjct: 253 QAFKSSLPYRLTGEQEKVWKEISNDMDSPVPMHRLLQGDVGAGKTVISTLALLKAVESGL 312
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q A M PTE+LA QHY + L + + LLTG T K+ + + + +++GD+
Sbjct: 313 QGALMAPTEILAEQHYLGMRNYLGPIGVEA-----GLLTGGTGRKKRKELLERIRSGDLK 367
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
LV+GTH+L+ E V+F L L +VDEQ RFGV QR +K Y
Sbjct: 368 LVVGTHALLQEGVDFKNLGLVVVDEQHRFGVRQRATLQNKGLY----------------- 410
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
P L M+ATPIPRT+A+ LYGD+ ++ I LPPGR P+KTY +
Sbjct: 411 ------PDTLVMTATPIPRTMAMTLYGDLDISIINGLPPGRQPVKTYAV 453
>gi|331269673|ref|YP_004396165.1| ATP-dependent DNA helicase RecG [Clostridium botulinum BKT015925]
gi|329126223|gb|AEB76168.1| ATP-dependent DNA helicase RecG [Clostridium botulinum BKT015925]
Length = 673
Score = 238 bits (608), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 171/528 (32%), Positives = 255/528 (48%), Gaps = 90/528 (17%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQ--NAQIDLDDGQYFIFIGEIIS 268
++ + G+ + L CG Y + LL +FPR Y + N +L D
Sbjct: 7 VASLKGIGPKTKELLNKCGIYKILDLLLYFPRDYEKIHYCNDISNLKDED---------- 56
Query: 269 SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIP 328
+VI+ ++ + + D V + I+ F+G F
Sbjct: 57 -------------KVIIKAKVKEIKK---DIYVKRNMVISTVIFTKNDLEFQGKWFNQ-- 98
Query: 329 FLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPS 388
K I+ K KV E +SGKV+ + Y++ N ++L+D + L P Y
Sbjct: 99 --KYIKNKFKVNEEYIISGKVKM----DKYKVSIINPNILEDTEKLI-----GITPKYSL 147
Query: 389 KGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLAR 448
KG L + TI L + + +PK I ++ L+ L + IH P +E A
Sbjct: 148 KGSLTNNFFNKTINYILSNITI-VENIPKNILDKYNLVSLDKSIRNIHHPTREEELLYAM 206
Query: 449 KRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRAL 508
KRL F E F L L +L +Y+K + A + S K L L
Sbjct: 207 KRLKFQELFTYSLKLL---------------MLKQYKKSKGIAFKI---SEELKILKENL 248
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
P++LT +Q + EI+ D K+ PMNRL+QGDVG GKT+V+ +A ++ +GYQ M P
Sbjct: 249 PFTLTDAQNKVVREILIDEKRDRPMNRLVQGDVGSGKTIVSLIALFNIVKNGYQGVLMAP 308
Query: 569 TELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHS 628
TE+LA QHYE + L +N KI LLTGST K+ +I+ L++G++ +VIGTH+
Sbjct: 309 TEILANQHYEQAINLFENFN-----VKIELLTGST--KKKDIIKGKLKSGEVDMVIGTHA 361
Query: 629 LIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAP 688
L+ + VEF+ L + + DEQ RFGV QR SKLY +++
Sbjct: 362 LLEDDVEFNNLGMVVTDEQHRFGVKQR----SKLY-------------------NKNNNI 398
Query: 689 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKG 736
VL M+ATPIPRTLAL+LYGD+ ++ I LPPGR I T+ ++ NE+
Sbjct: 399 DVLVMTATPIPRTLALSLYGDLDISTIDKLPPGRKKIDTFSVKENERN 446
>gi|357040477|ref|ZP_09102264.1| ATP-dependent DNA helicase RecG [Desulfotomaculum gibsoniae DSM
7213]
gi|355356568|gb|EHG04354.1| ATP-dependent DNA helicase RecG [Desulfotomaculum gibsoniae DSM
7213]
Length = 695
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 163/532 (30%), Positives = 253/532 (47%), Gaps = 83/532 (15%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN--AQIDLDDGQYFIFIG 264
L+ + V + R QL YT+ LL+HFPR Y D + D G+ +G
Sbjct: 10 LETQVKDVKMIGPRRAEQLARLKLYTVHDLLYHFPREYMDRSQLISPFDRHSGEIVTVLG 69
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFR-GTR 323
++ISS+ K + + ++ C ++ H+KK + GTR
Sbjct: 70 KVISSQENKTRKKLTITKAVMECTRGVFYAVWFNQ-------------FHIKKLLKPGTR 116
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY 383
+SGK+ N+ ++++Y I + D D + GR
Sbjct: 117 L-------------------YISGKLNNSFGNHEIQVQDYEI-ITGDSDSIH---AGRIV 153
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHID 442
P+YPS G++ +LR + AL+ ++ + +P+ + + GL+ L +A +H P
Sbjct: 154 PVYPSTSGVSQRMLRTFVHAALEQWYLSYREFLPRRLLDKEGLMVLPEALKQVHFPDTRA 213
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
A+ AR+R IF+E L L + ++ +K S L
Sbjct: 214 LAEQARRRFIFEE----------LFLFQLQLALLRRNIMRVKKKHSYGVI-----SELIN 258
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
K + L +SLT++Q + EI+ D+ P PMNRLLQGDVG GKTVVA L + + +G Q
Sbjct: 259 KYIAGLGFSLTAAQSRVVDEIMTDMDSPYPMNRLLQGDVGSGKTVVAVLTLLRAVENGLQ 318
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
A M PTE+LA QHY L + L + ++ALL+G PVK+ R + + + TG I++
Sbjct: 319 GALMAPTEVLAEQHYLSLNRSLSPL-----GVQVALLSGGMPVKERRALLEQIATGKISI 373
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
++GT +L+ VEF L + I+DEQ RFGV QR K Y
Sbjct: 374 IVGTQALLQGDVEFKKLAVVIIDEQHRFGVRQRASLQEKGVY------------------ 415
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
P +L M+ATPIPRTL++ +YGD+ ++ I LPPGR P++TY + E
Sbjct: 416 -----PDLLIMTATPIPRTLSMTVYGDLDISVIDALPPGRQPVRTYYVAPGE 462
>gi|397906403|ref|ZP_10507210.1| ATP-dependent DNA helicase RecG [Caloramator australicus RC3]
gi|397160546|emb|CCJ34547.1| ATP-dependent DNA helicase RecG [Caloramator australicus RC3]
Length = 678
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 172/540 (31%), Positives = 261/540 (48%), Gaps = 94/540 (17%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN----AQIDLDD-GQYFIFIGE 265
I + G+ ++ L + G T++ L +FPR Y D N ++++ D+ + + +
Sbjct: 3 IQYLKGVGPKIAKYLSSLGINTVKDALFYFPRDYEDRTNIKPISKLENDEMASVIVEVAQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFT 325
I S+ K G + + K ++ + F G F
Sbjct: 63 IFPSKKTKTGKTLN-----------------------------KILFKNETGFISGIWFN 93
Query: 326 SIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPI 385
P++K+ K+GE V + GKV S E+ + KD ++ +G PI
Sbjct: 94 Q-PYIKN---NFKIGEKVLLYGKV----SKQFGEITLVDPQYEKDYEE----TQG-INPI 140
Query: 386 YPSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
Y L ++R I +AL + + + P+ + + + LL + +A + IH PK +
Sbjct: 141 YSINKNLTQKIMRKIIKQALNFIDQEVEELLPESLRKIYDLLDIKNAIINIHFPKDKNML 200
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
LA++RL F+E +QLG L+++ + + + S K L
Sbjct: 201 KLAKRRLKFEELLIIQLG-LFELKKKYSSSTTSYSM---------------AVSKELKAL 244
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
LP+ LT +Q I EI+ D+K+ PMNRLLQGDVG GKT+++ +A +GYQ
Sbjct: 245 KEKLPFELTEAQRKVIREILIDMKKNTPMNRLLQGDVGSGKTIISVIALFNCAMNGYQGV 304
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
M PTE+LA QHY +L+LL + + IALL GST KQ I + + G+I++VI
Sbjct: 305 LMAPTEILAEQHYNTILELLKDWNIN-----IALLVGSTSKKQKEEIIRKISQGEISIVI 359
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+L+ E VEF L L I DEQ RFGV QR ++N +
Sbjct: 360 GTHALLQENVEFKNLALVITDEQHRFGVRQRA---------------TLINKGHN----- 399
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN--EKGYENVYK 742
PHVL M+ATPIPRTLAL +YGDM ++ I LPPGR ++TY + N EK Y+ V K
Sbjct: 400 ---PHVLVMTATPIPRTLALFMYGDMDISVIDQLPPGRQKVETYFVRPNMREKVYDFVKK 456
>gi|296185398|ref|ZP_06853808.1| ATP-dependent DNA helicase RecG [Clostridium carboxidivorans P7]
gi|296050232|gb|EFG89656.1| ATP-dependent DNA helicase RecG [Clostridium carboxidivorans P7]
Length = 681
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 176/525 (33%), Positives = 256/525 (48%), Gaps = 86/525 (16%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
IS + G+ + L CG + + LL +FPR Y E ISS
Sbjct: 7 ISSIKGVGPKTADNLRKCGIFNVMDLLLYFPRDY--------------------ESISSC 46
Query: 271 GMKAGCSFSFLEVIVGCEIA----DTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
G G + +VI+ C+ D T +G + I ++ +G F
Sbjct: 47 GNINGEKTNN-KVIINCKTIRIERDIRTKTGKTLTTI-------VFHDGNNILKGKWFNQ 98
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
P++K+ ++G + GK+ R EM N +LK+ ++S + + + P Y
Sbjct: 99 -PYIKN---SFRIGNIYTLMGKIEEFRG----EMFIANPKLLKNNQNIS-KVEEKIIPKY 149
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL 446
P K G+ +L+ + L+ + + +P I ++ L L A IH P ++ E D
Sbjct: 150 PLKSGITNNLVIKLVNIILEDVVI-VENLPDYIINKYKLCDLDKAIRVIHNPINLAELDE 208
Query: 447 ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLR 506
A KRL F E F L L ML+ + K+G+ K LNA L
Sbjct: 209 ATKRLKFQELFTYSLKIL--MLKNYFNE-NKKGIAFSIAK-ELNA------------LKD 252
Query: 507 ALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFM 566
+PY LT +Q I EI+ D K+ PMNRL+QGDVG GKT+VA ++ VI +GYQA M
Sbjct: 253 RIPYQLTKAQNRVIREILIDEKKSCPMNRLVQGDVGSGKTIVALISIFNVIKNGYQAVMM 312
Query: 567 VPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGT 626
PTE+LATQHY+ LKL + I LL GS K + I+K+L +G+I L+IGT
Sbjct: 313 APTEILATQHYDEALKLFEGF-----GINIKLLCGSVSQKNKQEIKKELASGEIDLIIGT 367
Query: 627 HSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHM 686
H+LI + VEF L + + DEQ RFGV+QR R +K G+ D
Sbjct: 368 HALIEDDVEFKNLGMVVTDEQHRFGVMQRSRLTNK----------------GANVD---- 407
Query: 687 APHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
+ M+ATPIPRTL+L LYGD++++ I +LPPGR I+T I+
Sbjct: 408 ---TIVMTATPIPRTLSLYLYGDLNVSIIDELPPGRQKIETQYIK 449
>gi|403386868|ref|ZP_10928925.1| ATP-dependent DNA helicase RecG [Clostridium sp. JC122]
Length = 677
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 174/530 (32%), Positives = 251/530 (47%), Gaps = 90/530 (16%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTY--ADLQNAQIDLDDGQYFIFIGEIIS 268
I+ V G+ ++ +L CG Y + LL +FPR Y + N+ + +D + I
Sbjct: 7 ITFVKGVGPKMGEKLNKCGIYNILDLLLYFPRDYDMVKIGNSIEEFEDKEKVI------- 59
Query: 269 SRGMKAGCSFSFLEVIVGCEIADTETTSGD--EVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
LE V + D T + V + G K F+G F
Sbjct: 60 ------------LECTVKSILRDIRTKNNKILSTVIFNCGNKN---------FKGQWFNQ 98
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
P+ K+ +V ++GKV N Y M N +LK+ + K + Y
Sbjct: 99 -PYAKN---SFRVNSTYVITGKVEKF--NGEYRMS--NPKILKN----TSIDKNKILAKY 146
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL 446
K LN S L I+ L + + +P +I +++ + L ++ IH PK + +
Sbjct: 147 SLKDNLNNSFLNKIISDVLSQVRI-IENLPSKILKKYQFMSLDESIRNIHSPKDRYKLEE 205
Query: 447 ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLR 506
ARKRL F E F + L +L + K L A+ ++ + L
Sbjct: 206 ARKRLKFQELFAYSMKIL---------------MLKELNKSSLGIAF--KMANELRNLKD 248
Query: 507 ALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFM 566
LP+ LT +Q I EI+ D K+ VPMNRL+QGDVG GKT+VA ++ VI +GYQAA M
Sbjct: 249 KLPFQLTEAQSRVIREILIDEKRNVPMNRLVQGDVGSGKTIVALISLFNVIKNGYQAAMM 308
Query: 567 VPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGT 626
PTE+LA QHY L ++ + + I LLTGST K +I+ DL+ G I L+IGT
Sbjct: 309 APTEILAKQHYFEATTLFEDFQIN-----IQLLTGSTTAKNKEIIKNDLKEGKIDLLIGT 363
Query: 627 HSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHM 686
H+LI E V F L + + DEQ RFGV QR + ++K N+D
Sbjct: 364 HALIEEDVVFKNLGMIVTDEQHRFGVNQRNKLSAK-----------SENAD--------- 403
Query: 687 APHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKG 736
VL MSATPIPRTL L LYGD+ ++ I LPPGR + TY ++ E+
Sbjct: 404 ---VLVMSATPIPRTLTLCLYGDLDVSVIDKLPPGRKKVDTYYLDKKERN 450
>gi|255524279|ref|ZP_05391238.1| ATP-dependent DNA helicase RecG [Clostridium carboxidivorans P7]
gi|255512104|gb|EET88385.1| ATP-dependent DNA helicase RecG [Clostridium carboxidivorans P7]
Length = 685
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 176/525 (33%), Positives = 256/525 (48%), Gaps = 86/525 (16%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
IS + G+ + L CG + + LL +FPR Y E ISS
Sbjct: 11 ISSIKGVGPKTADNLRKCGIFNVMDLLLYFPRDY--------------------ESISSC 50
Query: 271 GMKAGCSFSFLEVIVGCEIA----DTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
G G + +VI+ C+ D T +G + I ++ +G F
Sbjct: 51 GNINGEKTNN-KVIINCKTIRIERDIRTKTGKTLTTI-------VFHDGNNILKGKWFNQ 102
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
P++K+ ++G + GK+ R EM N +LK+ ++S + + + P Y
Sbjct: 103 -PYIKN---SFRIGNIYTLMGKIEEFRG----EMFIANPKLLKNNQNIS-KVEEKIIPKY 153
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL 446
P K G+ +L+ + L+ + + +P I ++ L L A IH P ++ E D
Sbjct: 154 PLKSGITNNLVIKLVNIILEDVVI-VENLPDYIINKYKLCDLDKAIRVIHNPINLAELDE 212
Query: 447 ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLR 506
A KRL F E F L L ML+ + K+G+ K LNA L
Sbjct: 213 ATKRLKFQELFTYSLKIL--MLKNYFNE-NKKGIAFSIAK-ELNA------------LKD 256
Query: 507 ALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFM 566
+PY LT +Q I EI+ D K+ PMNRL+QGDVG GKT+VA ++ VI +GYQA M
Sbjct: 257 RIPYQLTKAQNRVIREILIDEKKSCPMNRLVQGDVGSGKTIVALISIFNVIKNGYQAVMM 316
Query: 567 VPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGT 626
PTE+LATQHY+ LKL + I LL GS K + I+K+L +G+I L+IGT
Sbjct: 317 APTEILATQHYDEALKLFEGF-----GINIKLLCGSVSQKNKQEIKKELASGEIDLIIGT 371
Query: 627 HSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHM 686
H+LI + VEF L + + DEQ RFGV+QR R +K G+ D
Sbjct: 372 HALIEDDVEFKNLGMVVTDEQHRFGVMQRSRLTNK----------------GANVD---- 411
Query: 687 APHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
+ M+ATPIPRTL+L LYGD++++ I +LPPGR I+T I+
Sbjct: 412 ---TIVMTATPIPRTLSLYLYGDLNVSIIDELPPGRQKIETQYIK 453
>gi|400292450|ref|ZP_10794394.1| DEAD/DEAH box helicase [Actinomyces naeslundii str. Howell 279]
gi|399902429|gb|EJN85240.1| DEAD/DEAH box helicase [Actinomyces naeslundii str. Howell 279]
Length = 752
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 173/541 (31%), Positives = 258/541 (47%), Gaps = 70/541 (12%)
Query: 217 LSKRLYHQLENCGFYTLRKLLHHFPR---TYADLQNAQIDLDDGQYFIFIGEII--SSRG 271
+ KR QL G T LL PR T+ DL + + L G+ +I+ SSR
Sbjct: 5 VGKRTAAQLAKQGVETGGDLLRLLPRRYDTWGDLTDMRT-LVKGEQATIQAQIVRASSRR 63
Query: 272 MKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLK 331
++G + + +E V T+ S +VV + + + R T+
Sbjct: 64 TRSGRAPALMEATV------TDGVSTMDVVQFGAAGQMRA--------RATQLAP----- 104
Query: 332 SIEGKHKVGEFVCVSGKVRAMRSNNHYEM-REYNIDVLKDEDDLSLRAKGRPYPIYPSKG 390
G V +SGKV R R Y +D L + + +L A RP PIYP
Sbjct: 105 --------GTTVLMSGKVGLHRGRRQLSNPRLYVLDELDEAEREALLA--RPMPIYPGTE 154
Query: 391 GLNASLLRDTIARALQAL-PANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLAR 448
L + + + L L P + DP+P+++ ++ GL+ + AY +H+P + AR
Sbjct: 155 ALPSWSVGKAVRTVLDQLEPGDVPDPLPEDLRRQAGLIDAYTAYRWVHRPDDAHQWKAAR 214
Query: 449 KRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRAL 508
RL +E LQ+ L E + +P E SL L AL
Sbjct: 215 TRLRHEEALVLQVA-----LAQRRAHHEATRTAVAWPEP-------EATGSLRADLDAAL 262
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
PY LT+ Q+ EI DL + VPM RLLQGDVG GKT+VA A ++V+G G QAA + P
Sbjct: 263 PYDLTAGQVRVGQEITTDLARTVPMQRLLQGDVGSGKTLVALRAMLQVVGGGGQAALLAP 322
Query: 569 TELLATQHYEHL------LKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
TE+LA QH+ L L L + + ++ LLTGSTP Q R + DL G+ +
Sbjct: 323 TEVLAAQHHSSLEAVLGPLGRLGMLGGAERATRVHLLTGSTPAAQRRRVLADLAAGEPAI 382
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
V+GTH+L++E V+ L L +VDEQ RFGV QR + T P
Sbjct: 383 VVGTHALLSETVQIPFLGLVVVDEQHRFGVAQRDALRERGGVT-------------DPVT 429
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGY-ENVY 741
Q PH+L M+ATPIPRT+A+ ++GD+ + + +LP GR P+ T+++ + + E ++
Sbjct: 430 GQRHTPHLLVMTATPIPRTVAMTVFGDLVTSVLDELPAGRSPVTTHLVPWSRTSWVEGIW 489
Query: 742 K 742
+
Sbjct: 490 R 490
>gi|268609076|ref|ZP_06142803.1| ATP-dependent DNA helicase RecG [Ruminococcus flavefaciens FD-1]
Length = 678
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 140/350 (40%), Positives = 194/350 (55%), Gaps = 46/350 (13%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPAN-FDPVPKEITQEFGLLCLFDAYMGIHQPKHID 442
P+YP GL+ +++R + +AL+ + A+ F+ +P + +++ L L A IH P+ +
Sbjct: 144 PVYPLTQGLSVNMVRTNMKQALELMRADPFETLPGAVMEKYDLCPLMTALENIHFPESEE 203
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
++ AR+RL FDE LQLG L K R R A M+ S
Sbjct: 204 ASEAARQRLAFDELLKLQLGMS----------------LMKSRSRRSTAYKMDSSIS-AA 246
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
LP+ LT Q A+SE+I DL + VPMNRLLQGDVG GKT VA AC +G Q
Sbjct: 247 PFTEGLPFELTDDQKKAVSEVISDLCRDVPMNRLLQGDVGSGKTAVAAAACYFTAKNGAQ 306
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
AA M PTE+LA+QHY L + L+ K+ LLTGS K+ +IR+ + +G+I +
Sbjct: 307 AALMAPTEILASQHYRTLSEFLEPF-----GVKVCLLTGSLTAKKKAVIREQILSGEIDV 361
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
++GTH++I + VE+ AL L I DEQ RFGV QR + K
Sbjct: 362 IVGTHAIIQKDVEYRALGLVITDEQHRFGVAQRAAL--------------------AEKG 401
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEG 732
D +PH L MSATPIPRTLAL +YGD+ ++ IT LP GR P++TY + G
Sbjct: 402 D---SPHKLVMSATPIPRTLALIIYGDLDISAITQLPKGRKPVQTYAVTG 448
>gi|329947047|ref|ZP_08294459.1| putative ATP-dependent DNA helicase RecG [Actinomyces sp. oral
taxon 170 str. F0386]
gi|328526858|gb|EGF53871.1| putative ATP-dependent DNA helicase RecG [Actinomyces sp. oral
taxon 170 str. F0386]
Length = 752
Score = 236 bits (601), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 171/541 (31%), Positives = 261/541 (48%), Gaps = 70/541 (12%)
Query: 217 LSKRLYHQLENCGFYTLRKLLHHFPR---TYADLQNAQIDLDDGQYFIFIGEII--SSRG 271
+ KR QL G T LL PR T+ DL + + L G+ +I SSR
Sbjct: 5 VGKRTAAQLAKQGVETGADLLRLLPRRYDTWGDLTDMRT-LVKGEQATIQAQIARASSRR 63
Query: 272 MKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLK 331
++G + + +E V T+ S +VV + + + R TR
Sbjct: 64 TRSGRAPALMEATV------TDGVSTMDVVQFGAAGQMRA--------RATRLAP----- 104
Query: 332 SIEGKHKVGEFVCVSGKVRAMRSNNHYEM-REYNIDVLKDEDDLSLRAKGRPYPIYPSKG 390
G V +SGKV R R Y +D L + + +L A RP PIYP
Sbjct: 105 --------GTTVLMSGKVGLHRGRKQLTNPRLYVLDELDEAEREALLA--RPIPIYPGTE 154
Query: 391 GLNASLLRDTIARALQAL-PANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLAR 448
L + + + L L P + DP+P+++ + GL+ + AY +H+P + AR
Sbjct: 155 ALPSWSVAKAVRTVLDQLGPGDVADPLPEDLRRSAGLIDAYTAYRWVHRPDDAHQWKAAR 214
Query: 449 KRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRAL 508
RL +E LQ+ L E + +P++ SL L +L
Sbjct: 215 SRLRHEEALILQVA-----LAQRRAHHEATRTAVAWPEPQVV-------DSLRADLDASL 262
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
PY+LT+ Q+ EI DL + VPM RLLQGDVG GKT+V+ A ++V+ G QAA + P
Sbjct: 263 PYNLTAGQVRVGEEIAADLARTVPMQRLLQGDVGSGKTLVSLRAMLQVVDGGGQAALLAP 322
Query: 569 TELLATQHYEHLLKLLDNME------EDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
TE+LA QH+ L LL + E + ++ LLTGSTP Q R I DL G+ +
Sbjct: 323 TEVLAAQHHSSLEALLGPLALSGMLGEAERATRVHLLTGSTPAAQRRRILADLAAGEPAI 382
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
V+GTH+L+++ V+ L L +VDEQ RFGV QR + T ++G
Sbjct: 383 VVGTHALLSDTVQIPFLGLVVVDEQHRFGVAQRDALRERGGVTDSATG------------ 430
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGY-ENVY 741
Q PH+L M+ATPIPRT+A+ ++GD++ + + +LP GR P+ T+++ + + E ++
Sbjct: 431 -QRHTPHLLVMTATPIPRTIAMTVFGDLATSVLDELPAGRSPVPTHLVPWSRTSWVEGIW 489
Query: 742 K 742
+
Sbjct: 490 R 490
>gi|257870553|ref|ZP_05650206.1| ATP-dependent DNA helicase RecG [Enterococcus gallinarum EG2]
gi|257804717|gb|EEV33539.1| ATP-dependent DNA helicase RecG [Enterococcus gallinarum EG2]
Length = 681
Score = 236 bits (601), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 176/529 (33%), Positives = 252/529 (47%), Gaps = 93/529 (17%)
Query: 204 EPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFI 263
E +LD+ I+ + G+ ++ L G T+ LL ++P Y D+Q Q++ Q + I
Sbjct: 4 EEMLDQPITVLSGVGEKRAKDLAALGIQTIEDLLRYYPFRYEDIQERQLNEIQDQEKVTI 63
Query: 264 GEIISSRGM--KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRG 321
I+ S + + G S L+ +V N+
Sbjct: 64 KGIVVSPAVVNRFGYKKSRLQF---------RMMQDHDVFNVS----------------- 97
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
F + P+LK K + E + V GK A R + L L + G
Sbjct: 98 --FFNQPYLKD---KVVLSEEIAVYGKWDAKRKS------------LAGMKILGSKKPGD 140
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKH 440
PIY + S+L D I +A ++ + + P +T+++ LL A +H PK
Sbjct: 141 FAPIYHVNKSVRQSVLVDLIRQAFESYGDQIEEILPLTLTEKYRLLDRQTAMRAMHFPKD 200
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGL--GTQFEKEGLLDKYRKPRLNAAYMEGWS 498
E+ A++R+IF+EFF Q+ ++GL + EK GL Y RL A
Sbjct: 201 PQESHQAKRRIIFEEFFLFQM-----QIQGLKISEKAEKNGLAIDYDVQRLKA------- 248
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
+ LP+ LT++Q +EI DLK P M RLLQGDVG GKTVVA +A +
Sbjct: 249 -----FTQTLPFELTAAQKRVTNEICHDLKSPQHMQRLLQGDVGSGKTVVAAIALYATMT 303
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+G+Q A MVPTE+LA QH E L +L D +E ALLTGST K+ R+I + L G
Sbjct: 304 AGFQGALMVPTEILAQQHLESLNQLFDPLE-----VTTALLTGSTKTKERRVILEQLAAG 358
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+I +V+GTH+LI E V F+ L L I DEQ RFGV QR K Y
Sbjct: 359 EIDIVVGTHALIQEGVNFARLGLVITDEQHRFGVNQRKILREKGYL-------------- 404
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLA+ YG+M ++ I ++P GRIP++T
Sbjct: 405 ---------PDVLFMTATPIPRTLAITAYGEMDVSIIDEMPAGRIPVET 444
>gi|254526118|ref|ZP_05138170.1| Type III restriction enzyme, res subunit family [Prochlorococcus
marinus str. MIT 9202]
gi|221537542|gb|EEE39995.1| Type III restriction enzyme, res subunit family [Prochlorococcus
marinus str. MIT 9202]
Length = 618
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 152/432 (35%), Positives = 228/432 (52%), Gaps = 52/432 (12%)
Query: 313 LHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDED 372
+ + KFF G RF S F S + + G + +SGKV+ + + I++LK +
Sbjct: 12 IKVTKFFLGRRFRSYSFFSSQKSLYTPGTKLAISGKVKLTEYGKTF--VDPQIEILKGIN 69
Query: 373 DLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAY 432
D + G+ P+Y L+ + + L + + K+ LL ++
Sbjct: 70 D-NFNYSGKILPLYSLGEALSNMSFIKLMKKVLIYAKQYPEILNKKQLDSLSLLSKGESL 128
Query: 433 MGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLN-- 490
+ IH P ++KRL+FDE F LQ+ L + RK N
Sbjct: 129 INIHFPLTQQALLESKKRLVFDELFLLQIKFLL-----------------RKRKTNKNVI 171
Query: 491 AAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAF 550
+ + SL K+ L P+ LT SQ + ++EI DL PVPM+RLLQGDVG GKT++A
Sbjct: 172 SQQLPQKKSLLKEFLNTFPFELTKSQENVLNEIKKDLSNPVPMSRLLQGDVGSGKTIIAI 231
Query: 551 LACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRM 610
+ + VI Q AFMVPTE+LA QHY++LLK LD + + LLTG+TP K+ +
Sbjct: 232 ASLLLVIEKNLQGAFMVPTEVLAEQHYKNLLKYLDPL-----LVSVELLTGNTPQKKRKE 286
Query: 611 IRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSG 670
I +L+ G + +++GTH+L +KV F+ L + ++DEQ RFGV QR R +K T++
Sbjct: 287 IFSNLKNGLVDILVGTHALFEDKVIFNGLGMVVIDEQHRFGVSQRNRLLNKGENTNL--- 343
Query: 671 MAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
L+M+ATPIPRTLAL++YGD+ ++QIT+LPPGR+PI T II
Sbjct: 344 --------------------LSMTATPIPRTLALSIYGDLDVSQITELPPGRVPITTKII 383
Query: 731 EGNEKGYENVYK 742
+E N++K
Sbjct: 384 --SEDDLSNLFK 393
>gi|325068483|ref|ZP_08127156.1| ATP-dependent DNA helicase RecG [Actinomyces oris K20]
Length = 752
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 170/543 (31%), Positives = 262/543 (48%), Gaps = 74/543 (13%)
Query: 217 LSKRLYHQLENCGFYTLRKLLHHFPR---TYADLQNAQIDLDDGQYFIFIGEII--SSRG 271
+ KR QL G T LL PR T+ +L + + L +G+ +++ SSR
Sbjct: 5 VGKRTAAQLAKQGVETGADLLRLLPRRYDTWGELTDMRT-LVEGEQATIQAQVVRASSRR 63
Query: 272 MKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLK 331
++G + +E V T G +++ +F + ++
Sbjct: 64 TRSGRVPALMEATV---------TDGASTMDL------------------VQFGAAGQMR 96
Query: 332 SIEGKHKVGEFVCVSGKVRAMRSNNHYEM-REYNIDVLKDEDDLSLRAKGRPYPIYPSKG 390
+ + G V +SGKV R R Y +D L + + +L A RP PIYP
Sbjct: 97 TRAAQLAPGTTVLLSGKVGLHRGRKQLSNPRLYVLDELDEGEREALLA--RPMPIYPGTE 154
Query: 391 GLNASLLRDTIARALQALPAN--FDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLAR 448
L + L+ + L L + DP+P+E+ +E GL+ + AY +H+P+ + AR
Sbjct: 155 ALPSWLVAKAVRSVLDQLESGDVADPLPEELRREAGLVDAYTAYRWVHRPEDSGQWKAAR 214
Query: 449 KRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYM--EGWSSLTKKLLR 506
KRL +E LQ+ L Q + R A+ E SL L
Sbjct: 215 KRLRHEEALILQVA-LAQRRA-------------HHEATRTAVAWPVPETEGSLRADLDA 260
Query: 507 ALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFM 566
LPY LT+ Q EI DL + VPM RLLQGDVG GKT+VA A ++V+G G QAA +
Sbjct: 261 RLPYDLTAGQKRVGEEISADLARTVPMQRLLQGDVGSGKTLVALRAMLQVVGGGGQAALL 320
Query: 567 VPTELLATQHYEHLLKLLDNMEE------DKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
PTE+LA QH+ L +L M +H ++ LLTGSTP Q R I +L G+
Sbjct: 321 APTEVLAAQHHSSLEVVLGPMARLGMLGGAEHATRVHLLTGSTPAAQRRRILTELAAGEP 380
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+V+GTH+L+++ V+ L L +VDEQ RFGV QR + T ++G
Sbjct: 381 AIVVGTHALLSDTVQIPFLGLVVVDEQHRFGVAQRDALRERGGLTDPATG---------- 430
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGY-EN 739
Q PH+L M+ATPIPRT+A+ ++GD++ + + +LP GR + T+++ + + E
Sbjct: 431 ---QSHTPHLLVMTATPIPRTIAMTVFGDLATSVLDELPAGRSAVPTHLVPWSRTSWVEG 487
Query: 740 VYK 742
+++
Sbjct: 488 IWR 490
>gi|269127644|ref|YP_003301014.1| ATP-dependent DNA helicase RecG [Thermomonospora curvata DSM 43183]
gi|268312602|gb|ACY98976.1| ATP-dependent DNA helicase RecG [Thermomonospora curvata DSM 43183]
Length = 736
Score = 235 bits (600), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 172/517 (33%), Positives = 249/517 (48%), Gaps = 80/517 (15%)
Query: 230 FYTLRKLLHHFPRTYADLQNAQI-DLD---DGQYFIFIGEIISSRGMKAGCSFSFLEVIV 285
+T+ L+HH+PR YA Q ++ DLD DG++ + E+ +G S +L
Sbjct: 26 LHTVGDLVHHYPRRYA--QRGELTDLDGLVDGEHVTVMAEVTKVQGRTIPRSPGYL---- 79
Query: 286 GCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCV 345
E T D G K + K +R + S GK V +
Sbjct: 80 ------LEVTVSD-----GHGTLKLTFFGRKGAWRAEKELSPGVRGLFSGK--VTTYRPR 126
Query: 346 SGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY-----PIYPSKGGLNASLLRDT 400
G R R H E R VL +E S A R + PIYP+ GL + + +
Sbjct: 127 GGG-RPQRQLTHPEFR-----VLPEEG--SAGAAAREFAEEIIPIYPATKGLESWKIEEC 178
Query: 401 IARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQ 460
+ L L DP+P I + GL+ L +A GIH+P+ E + AR+RL +DE F LQ
Sbjct: 179 VQIVLDQLDLGPDPMPGPILRRHGLIGLGEALRGIHKPRDWGELERARRRLKWDEAFVLQ 238
Query: 461 LGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAI 520
+ L + + L +PR+ ++ + + ALP++LT QL
Sbjct: 239 IA--------LAQRRKAASALPAKPRPRVRGGLLDAFDA-------ALPFTLTEGQLQVG 283
Query: 521 SEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHL 580
EI DL PM+RLLQGDVG GKTVVA A ++V+ G QAA + PTE+LA QHY +
Sbjct: 284 EEIAADLSGEHPMHRLLQGDVGAGKTVVALRAMLQVVDGGGQAALLAPTEVLAQQHYRSI 343
Query: 581 LKLLDNMEE-------DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEK 633
+L + E DK ++ LLTGS K R + +G+ +V+GTH+L+ E
Sbjct: 344 TAMLGPLAEAGRLGGADKAT-RVVLLTGSQGAKARRQALLEAASGEAGIVVGTHALLQEH 402
Query: 634 VEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAM 693
V+F+ L L +VDEQ RFGV QR K + G PHVL M
Sbjct: 403 VQFADLGLVVVDEQHRFGVEQRDALREK-----AAGGR----------------PHVLVM 441
Query: 694 SATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+ATPIPRT+A+ ++GD+ + ++ LP GR IKT+++
Sbjct: 442 TATPIPRTVAMTVFGDLETSTLSQLPSGRAEIKTFVV 478
>gi|392406759|ref|YP_006443367.1| ATP-dependent DNA helicase RecG [Anaerobaculum mobile DSM 13181]
gi|390619895|gb|AFM21042.1| ATP-dependent DNA helicase RecG [Anaerobaculum mobile DSM 13181]
Length = 696
Score = 235 bits (599), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 180/532 (33%), Positives = 252/532 (47%), Gaps = 83/532 (15%)
Query: 204 EPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFI 263
E +LD+ I + G+ + L G T+ LL FPR Y D ++
Sbjct: 9 ENVLDRSIRFLKGVGPKRAALLIKLGVKTIEDLLFLFPRRYEDRRH-------------- 54
Query: 264 GEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTR 323
I ++ + L +VG E T +K+ + L + G++
Sbjct: 55 --ITPMSSIEPDTFATLLVRVVGVEKRTT--------------RKRNLELTIATITDGSQ 98
Query: 324 FTSIPFL--KSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
+ K +E G V + GK R +S ++ ++++ E S G+
Sbjct: 99 IAQALWFNRKRLENILLPGTVVALYGKAR--KSFGLLQVINPEFEIVEAEG--SPEEVGK 154
Query: 382 PYPIYPSKGGLNASLLRDTIARAL-QALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKH 440
P+YP GLN LR + +AL + LP + +P EI GL L DA +G H P
Sbjct: 155 IVPVYPLTEGLNQRWLRLLVRQALMEYLPYVEEFMPPEILARNGLPSLKDALLGYHYPDD 214
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
L RKRL FDE F LQLG L TQ + E + PRL+ W
Sbjct: 215 ERCWKLCRKRLAFDELFLLQLG-----LAVKKTQLKNEA-----KAPRLS------WHGP 258
Query: 501 TKK--LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
++ + R L + LT +Q + EI D+ + VPMNRLLQGDVG GKTV+A A +
Sbjct: 259 LQRDFIERCLNFELTGAQRKVLQEIADDVTKDVPMNRLLQGDVGSGKTVIAVAAMLASAD 318
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+G+Q+A MVPTE+LA QHY + LD + K LLT S ++ + D++ G
Sbjct: 319 AGFQSALMVPTEVLAKQHYSKISAWLDEL-----NLKATLLTSSLTPQERQKAYDDIKMG 373
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+VIGTH+LI E VEF L L ++DEQ RFGV+QR
Sbjct: 374 KSNIVIGTHALIQEGVEFQRLGLVVIDEQHRFGVLQRLTLA------------------- 414
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
D+ PHVL M+ATPIPRTLAL +YGD+S++ I +LPPGR PIKT I
Sbjct: 415 ----DKGKCPHVLVMTATPIPRTLALTVYGDLSVSVIDELPPGRSPIKTQWI 462
>gi|33862854|ref|NP_894414.1| ATP-dependent DNA helicase RecG [Prochlorococcus marinus str. MIT
9313]
gi|33634770|emb|CAE20756.1| putative DNA helicase [Prochlorococcus marinus str. MIT 9313]
Length = 846
Score = 235 bits (599), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 181/567 (31%), Positives = 271/567 (47%), Gaps = 62/567 (10%)
Query: 170 RFGLSEAWPSLYPALPNESSTSSEVGSLPSEASIEPLLDKCISCVPGLSKRLYHQLENCG 229
R GL P P L + LPS + L+ +S V G+ +L +L G
Sbjct: 111 RQGLEPPTPIGPPRLKKRGAERQRQMPLPS-GNRSLTLESPLSEVKGIGPKLAERLAGLG 169
Query: 230 FYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEI 289
++ LL ++PR Y D + + + ++AG + + + + C
Sbjct: 170 LLLVKDLLQYYPRDYVDYSS----------------LRRIQALEAGEAATIVATVRRCHG 213
Query: 290 ADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKV 349
+ ++ + Q L +++FF G RF+S +LKS + G V VSG V
Sbjct: 214 FTSPRNPNLSILELQL-QDPTGRLKVRRFFAGRRFSSPAYLKSQSRLYPPGVTVAVSGLV 272
Query: 350 RAMRSNNHYEMREYNIDVLKD-EDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQAL 408
+ ++ + I+V++ L ++ GR P+Y GL A RD + + L
Sbjct: 273 KGGPYGMSFQ--DPLIEVMESPHSPLRSQSIGRLLPVYALTEGLTADRFRDLVLQILPLA 330
Query: 409 PANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQML 468
+ + +P++ Q L DA + IH P AR+RL+FDEF LQL
Sbjct: 331 ASWPESLPEQRRQVLRLPRRSDALVAIHHPDDQQTLQSARRRLVFDEFLLLQL------- 383
Query: 469 EGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLK 528
++ L + P L A L + L LP+ LT++Q ++EI DL
Sbjct: 384 ----GLLKRRAELRRCSAPVLQTAGRR--DGLVARFLELLPFPLTAAQQRVLTEIEADLV 437
Query: 529 QPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNME 588
PM RL+QGDVG GKTVVA A + + +G+Q AFM PTE+LA QHY L L +
Sbjct: 438 LSEPMARLIQGDVGSGKTVVAIAALLTAVEAGWQGAFMAPTEVLAEQHYRTLCCWLPQLH 497
Query: 589 EDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQ 648
+ LLTG+T + R I DL G + +++GTH+LI + V FS L L +VDEQ
Sbjct: 498 V-----SVELLTGATTRIRRRQILDDLVNGSLKILVGTHALIEDPVAFSRLGLVVVDEQH 552
Query: 649 RFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYG 708
RFGV QR R +K + PH+L M+ATPIPRTLAL+L+G
Sbjct: 553 RFGVKQRNRLLNK-----------------------GLQPHLLTMTATPIPRTLALSLHG 589
Query: 709 DMSLTQITDLPPGRIPIKTYIIEGNEK 735
D+ ++QI +LPPGR PI+T +I G ++
Sbjct: 590 DLDVSQIDELPPGRTPIQTQMIRGCDR 616
>gi|402834829|ref|ZP_10883421.1| ATP-dependent DNA helicase RecG [Selenomonas sp. CM52]
gi|402277019|gb|EJU26113.1| ATP-dependent DNA helicase RecG [Selenomonas sp. CM52]
Length = 685
Score = 235 bits (599), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 157/522 (30%), Positives = 247/522 (47%), Gaps = 89/522 (17%)
Query: 216 GLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAG 275
G+ + Y L G +T+ LL ++PRTY D + + + G
Sbjct: 12 GVGAKKYEALNKIGLFTVYDLLTYYPRTYEDRRV----------------LTPLTALAVG 55
Query: 276 CSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFL--KSI 333
+ VI IA+ T G ++++D GT F + F K +
Sbjct: 56 EQQAVTGVI--RHIAERRTGRGIHILSVDIDD-------------GTGFLQVTFFNQKFL 100
Query: 334 EGKHKVGEFVCVSGKVR-AMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP-----YPIYP 387
+GK K G + GK+ A +M + D SL KG P+Y
Sbjct: 101 KGKLKAGMQLFAVGKIDYAFGGRGKKQMSQVK--------DFSLMEKGGEAALGILPVYA 152
Query: 388 SKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA 447
+ G LN R + Q + + +P+ I Q + L+ +AY +H P+ + LA
Sbjct: 153 ASGSLNQKFFRTLLTGVFQGIGKIVETLPESICQRYRLVAREEAYREVHFPESPEALHLA 212
Query: 448 RKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRA 507
R+RLIF+E + +Q G L LL + + + G S L+++ A
Sbjct: 213 RERLIFEELYLIQCGLL---------------LLRRESREKKKGVRHLGASRLSREAREA 257
Query: 508 LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMV 567
LP+ LT Q A +I D++ +PM RL+QGDVG GKT +A LA ++ + +G+Q AFM
Sbjct: 258 LPFRLTEDQEKAWRDIRQDMELALPMRRLVQGDVGSGKTALALLALVKTVENGFQGAFMA 317
Query: 568 PTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTH 627
PTE+LA QH++ +LL ++ ++ LLTG K+ + ++ D+ +VIGTH
Sbjct: 318 PTEILARQHFDKFSELLRDL-----PVRLLLLTGRLSKKEREAAYEAIEAHDVDIVIGTH 372
Query: 628 SLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMA 687
+LI E V F++L L + DEQ RFGV QR + H+
Sbjct: 373 ALIQEPVAFASLGLVVTDEQHRFGVEQRATLEKR----------------------AHLT 410
Query: 688 PHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYI 729
P +L M+ATPIPRT+ L +YGD+ +++I LPPGR+P++T++
Sbjct: 411 PDMLVMTATPIPRTMTLTVYGDLDVSRIEHLPPGRVPVETFV 452
>gi|300088038|ref|YP_003758560.1| ATP-dependent DNA helicase RecG [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527771|gb|ADJ26239.1| ATP-dependent DNA helicase RecG [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 824
Score = 234 bits (598), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 168/548 (30%), Positives = 253/548 (46%), Gaps = 93/548 (16%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFIG 264
L+ ++ + G++ +L G +T+R +L+HFP + D +L G +
Sbjct: 125 LELPVTSLKGINDSTGSRLRKLGIHTVRDMLYHFPSRHVDYSRTTPIAELSPGPEQTIVA 184
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
+ R G S TE GDE NI R F
Sbjct: 185 TVWEVRTTTPGGRRS------------TEAIVGDETGNI----------------RALWF 216
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ + I ++ +SGK+ ++ +E E+ + ++ L GR P
Sbjct: 217 NNPYLTRQIHANDRL----VLSGKIGVFKNTLVFESPEW-----EKLENRELVHTGRLAP 267
Query: 385 IYPSKGGLNASLLRDTIARALQAL-PANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
IYP GL +R + + P+ + +P++I L+ L +A H P +
Sbjct: 268 IYPLTAGLFPRQMRKLMKEVVDGFAPSLEEYLPEDIRARRDLITLPEAVAQAHFPDDYEA 327
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
D AR RL FDE F LQLG M + + GL + SL K+
Sbjct: 328 KDAARSRLAFDELFVLQLG---VMARKRAWRLSRPGLPTPTDQ------------SLLKR 372
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
L +L + LT++Q ++++I+ D+ + M+RLLQGDVG GKTVVA A + + +GYQ
Sbjct: 373 FLDSLSFQLTAAQRRSLNDILDDMSRSEAMSRLLQGDVGSGKTVVATAAALMSVAAGYQC 432
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKP---------------KIALLTGSTPVKQS 608
AFM PTE+LA QHY + +LD + D+ + +ALL G
Sbjct: 433 AFMAPTEILAEQHYRSVTGMLDILASDRQESAGVTSFLGILPDRPLTVALLIGDAKASGK 492
Query: 609 RMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMS 668
++IR ++ GDI LVIGTHSL+ + ++F L LAI+DEQ RFGV QR K
Sbjct: 493 KLIRDRIRNGDIDLVIGTHSLVQKSLKFQKLGLAIIDEQHRFGVEQRQNLRQK------- 545
Query: 669 SGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTY 728
G+ PH+L M+ATPIPRTLAL LYGD+ L+ I +LPPGR I+T
Sbjct: 546 ---------GN-------NPHLLVMTATPIPRTLALTLYGDLDLSVIDELPPGRQAIRTR 589
Query: 729 IIEGNEKG 736
++ ++
Sbjct: 590 WLKPEQRA 597
>gi|390562427|ref|ZP_10244641.1| branch migrating ATP-dependent DNA helicase involved in DNA
recombination and repair [Nitrolancetus hollandicus Lb]
gi|390172993|emb|CCF83946.1| branch migrating ATP-dependent DNA helicase involved in DNA
recombination and repair [Nitrolancetus hollandicus Lb]
Length = 824
Score = 234 bits (598), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 177/534 (33%), Positives = 261/534 (48%), Gaps = 85/534 (15%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
LD+ ++ +PG+ + Q G T+ LL+ PR Y D Q I +
Sbjct: 142 LDEPVTVLPGVGEGRARQFAALGVQTVEDLLYLLPRRYKDYTRVQ----------SIASV 191
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNID----SGQKKKIYLHLKKFFRGT 322
+ R + S +E T +G +V+ + +G+ + I+ +
Sbjct: 192 LFHRECTVKGTVSTVE--------KERTRTGKTLVSAEIVDPTGRIRVIWFN-------- 235
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
P+ I + + G + +SG+V R + E+ + L DE L GR
Sbjct: 236 -----PY---IARQLQPGMPIAISGRVEQQRGALCFRNPEW--EPLDDE----LLHTGRV 281
Query: 383 YPIYPSKGGLNASLLRDTIARALQA-LPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
PIYP L +R+ AL A LP DP+P E+ + GLL L A +H P
Sbjct: 282 VPIYPLTRNLYQKQVRNLTRAALTAALPLVEDPLPDEVRRRNGLLPLRAALERMHYPGSE 341
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
E AR RL FDEF LQ+G + + +E ++ + RL A + E
Sbjct: 342 AEQQQARARLAFDEFLVLQIGLVRRKVE-----WQTQAGHAFTGNERLLALFEE------ 390
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
LPY LT++Q A+ EI+ D+ PM+RLLQGDVG GKTVV + I G+
Sbjct: 391 -----CLPYRLTTAQSRALGEIMGDMVSRRPMSRLLQGDVGSGKTVVGAAVALVAIAEGF 445
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
QAA + PTE+LA QHY +L+ L + +P++ALLTGST ++ I + L+ I
Sbjct: 446 QAALLAPTEILAEQHYRNLVNLYTVLPV-PERPRLALLTGSTTGRERAAIDEGLRERTID 504
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
L+IGTH+++ E+VEF+ L LAI+DEQ RFGV+QR K Y
Sbjct: 505 LLIGTHAILEERVEFARLGLAIIDEQHRFGVIQRAMLRDKGYN----------------- 547
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
P VL M+ATPIPR+LAL ++GD+ ++ I +LPPGR PI+T IE +++
Sbjct: 548 ------PDVLVMTATPIPRSLALVMHGDLDVSIIDELPPGRQPIETQWIESDQR 595
>gi|253682695|ref|ZP_04863492.1| ATP-dependent DNA helicase RecG [Clostridium botulinum D str. 1873]
gi|253562407|gb|EES91859.1| ATP-dependent DNA helicase RecG [Clostridium botulinum D str. 1873]
Length = 673
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 171/536 (31%), Positives = 256/536 (47%), Gaps = 106/536 (19%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQ--NAQIDLDDGQYFIFIGEIIS 268
++ + G+ + L CG Y + LL +FPR Y +Q N +L D
Sbjct: 7 VASLKGIGPKTQELLNKCGIYKILDLLLYFPRDYEKIQYCNDINNLKDAD---------- 56
Query: 269 SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFT--S 326
+VI+ ++ KK IY+ FT +
Sbjct: 57 -------------KVIIKAKVKQI---------------KKDIYVKRNMIISSVIFTKNN 88
Query: 327 IPF------LKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG 380
+ F K I+ K K+ E + GKV+ R +++ N ++L++ + L
Sbjct: 89 LEFEGKWFNQKYIKNKFKLNEECIILGKVKMDR----HKISIINPNILENTEKLL----- 139
Query: 381 RPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKH 440
P Y KG L + TI L + + +PK I ++ LL L A IH PK
Sbjct: 140 NITPKYSLKGNLTNNFFNKTINYILSNITI-VENIPKNILDKYDLLSLDKAIRSIHNPKQ 198
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+E A KRL F E F L L +L +Y+K + A + +
Sbjct: 199 EEELLNAMKRLKFQELFTYSLKLL---------------MLKQYKKSKGIAFKI---AEE 240
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
K L +LP++LT +Q + EI+ D K+ PMNRL+QGDVG GKT+V+ +A V+ +G
Sbjct: 241 LKILKESLPFTLTDAQNKVVREILIDEKRDRPMNRLVQGDVGSGKTIVSLIALFNVVKNG 300
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQ M PTE+LA QHY+ + LL +K +I LLTGST K+ +I+ L++G+I
Sbjct: 301 YQGVLMAPTEILANQHYQQAINLL-----EKFNVRIELLTGST--KKKDIIKSKLKSGEI 353
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+L+ + VEF+ L + + DEQ RFGV QR SK+Y
Sbjct: 354 DIVIGTHALLEDDVEFNNLGMVVTDEQHRFGVKQR----SKIY----------------- 392
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKG 736
+++ VL M+ATPIPRTLAL+LYGD+ ++ I LPPGR I T+ + N++
Sbjct: 393 --NKNNNIDVLVMTATPIPRTLALSLYGDLDISTIDKLPPGRKKIDTFSVRENKRN 446
>gi|357049069|ref|ZP_09110298.1| ATP-dependent DNA helicase RecG [Enterococcus saccharolyticus 30_1]
gi|355384369|gb|EHG31437.1| ATP-dependent DNA helicase RecG [Enterococcus saccharolyticus 30_1]
Length = 676
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 175/527 (33%), Positives = 251/527 (47%), Gaps = 93/527 (17%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGE 265
+LD+ I+ + G+ ++ L G T+ LL ++P Y D+Q Q++ Q + I
Sbjct: 1 MLDQPITVLSGVGEKRAKDLAALGIQTIEDLLRYYPFRYEDIQERQLNEIQDQEKVTIKG 60
Query: 266 IISSRGM--KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTR 323
I+ S + + G S L+ +V N+
Sbjct: 61 IVVSPAVVNRFGYKKSRLQF---------RMMQDHDVFNVS------------------- 92
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY 383
F + P+LK K + E + V GK A R + L L + G
Sbjct: 93 FFNQPYLKD---KVVLSEEIAVYGKWDAKRKS------------LAGMKILGSKKPGDFA 137
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKHID 442
PIY + S+L D I +A ++ + + P +T+++ LL A +H PK
Sbjct: 138 PIYHVNKSVRQSVLVDLIRQAFESYGDQIEEILPLTLTEKYRLLDRQTAMRAMHFPKDPQ 197
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGL--GTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
E+ A++R+IF+EFF Q+ ++GL + EK GL Y RL A
Sbjct: 198 ESHQAKRRIIFEEFFLFQM-----QIQGLKISEKAEKNGLAIDYDVQRLKA--------- 243
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
+ LP+ LT++Q +EI DLK P M RLLQGDVG GKTVVA +A + +G
Sbjct: 244 ---FTQTLPFELTAAQKRVTNEICHDLKSPQHMQRLLQGDVGSGKTVVAAIALYATMTAG 300
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
+Q A MVPTE+LA QH E L +L D +E ALLTGST K+ R+I + L G+I
Sbjct: 301 FQGALMVPTEILAQQHLESLNQLFDPLE-----VTTALLTGSTKTKERRVILEQLAAGEI 355
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+V+GTH+LI E V F+ L L I DEQ RFGV QR K Y
Sbjct: 356 DIVVGTHALIQEGVNFARLGLVITDEQHRFGVNQRKILREKGYL---------------- 399
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLA+ YG+M ++ I ++P GRIP++T
Sbjct: 400 -------PDVLFMTATPIPRTLAITAYGEMDVSIIDEMPAGRIPVET 439
>gi|406981501|gb|EKE02965.1| hypothetical protein ACD_20C00301G0011 [uncultured bacterium]
Length = 807
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 176/538 (32%), Positives = 258/538 (47%), Gaps = 90/538 (16%)
Query: 208 DKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN-AQI-DLDDGQYFIFIGE 265
D + V G+ ++ + G +T + LLH++PR + D + QI DL GQ G
Sbjct: 111 DVDVMYVKGVGPKVGFLINKLGIFTAQDLLHYYPRKHLDYASRTQIKDLKVGQEATIFG- 169
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIAD-TETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
+I S + S L I+ ++ D T T S G+ K F R+
Sbjct: 170 VIKSTNVFTSKKRSNL-TIISIQVYDGTGTISASWFY----GKSNK--------FMMDRY 216
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVL----KDEDDLSLRAKG 380
S ++ G + +SG V+ + + + ++L +++D L + G
Sbjct: 217 KS---------QYPQGSNIILSGTVKLDSYSGKLVIDKPQSEILGGDFEEKDSLHV---G 264
Query: 381 RPYPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPK 439
R P+YP LN LR I A++ D +P I ++ GL+ A IH P
Sbjct: 265 RIVPVYPLTENLNIKTLRRAIHNAIETYSDGIEDFIPDYIREKLGLIDKITAIKQIHFPD 324
Query: 440 HIDEADLARKRLIFDEFFYLQLGRLYQM-------LEGLGTQFEKEGLLDKYRKPRLNAA 492
+ AR+RL+FDE F +QL RL M EGL +K+GLL+K+
Sbjct: 325 SSETLQSARQRLVFDELFLVQL-RLALMRKQYKSDTEGLVLNIKKDGLLEKF-------- 375
Query: 493 YMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLA 552
+++LP+ LT++Q A +EI+ DL P PM RLLQGDVG GKTV+A +A
Sbjct: 376 ------------IQSLPFELTNAQKEAFNEILTDLSTPEPMQRLLQGDVGSGKTVIAAMA 423
Query: 553 CMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIR 612
+ + +GYQ A M PTE+LA QH + L + + L G K R +
Sbjct: 424 LLAAVENGYQGAIMAPTEILAEQHCRNFTDWLTPL-----GISVGLFVGKHGTKVRRELY 478
Query: 613 KDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMA 672
++L+ G I + IGTH+LI E +EF+ L L ++DEQ RFGV QR +K
Sbjct: 479 QNLKNGQINVAIGTHALIQESIEFNNLGLIVIDEQHRFGVRQRSELKNK----------- 527
Query: 673 MVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
P +L M+ATPIPRTLAL ++GD+ LT I +LPPGR PIKT +I
Sbjct: 528 ------------GTNPEMLTMTATPIPRTLALTVHGDLDLTIINELPPGRKPIKTALI 573
>gi|217967527|ref|YP_002353033.1| ATP-dependent DNA helicase RecG [Dictyoglomus turgidum DSM 6724]
gi|217336626|gb|ACK42419.1| ATP-dependent DNA helicase RecG [Dictyoglomus turgidum DSM 6724]
Length = 779
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 151/398 (37%), Positives = 205/398 (51%), Gaps = 49/398 (12%)
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRD 399
G + +SG+ + + + +E EY + L + +D GR PIY GL +LR
Sbjct: 198 GTELLISGEAKRLLKHIEFENPEY--ETLDEGEDKEFLNVGRIVPIYSLTSGLTQKVLRK 255
Query: 400 TIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFY 458
I AL DP+PK + +++ L+ + H P A KR+ F+E F+
Sbjct: 256 IIYDALTDYSIFLEDPLPKYLREKYNLMDKPVSVWEKHFPTSFLTMASASKRITFEELFF 315
Query: 459 LQLGRLYQMLEGLGTQFEKEGLLDKYRK-PRLNAAYMEGWSSLTKKLLRALPYSLTSSQL 517
LQL L K R+ L+A S L +K L +LP+ LT +Q
Sbjct: 316 LQLN-----------------LAKKRREIEELSAPVFNIQSELVEKFLGSLPFKLTKAQE 358
Query: 518 SAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHY 577
EI DL PM+RLLQGDVG GKTV+A LA + +GYQ AFMVPTE+LA QHY
Sbjct: 359 KVWEEIKKDLSSGRPMHRLLQGDVGSGKTVIAALATILAYDNGYQTAFMVPTEILAEQHY 418
Query: 578 EHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFS 637
L + + + KIALLT STP K+ I DL G + +VIGTH+LI E+V F
Sbjct: 419 NRLKNIFEPL-----GIKIALLTSSTPKKEKTYIYLDLAEGKLPVVIGTHALIQEEVTFK 473
Query: 638 ALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATP 697
L L I+DEQ RFGV+QR + K APH+L M+ATP
Sbjct: 474 KLGLVIIDEQHRFGVIQRAKLWKK-----------------------GEAPHLLVMTATP 510
Query: 698 IPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
IPR+LAL LYG++ ++ I +LPPGR P+ TY+ E+
Sbjct: 511 IPRSLALVLYGELDISIIDELPPGRKPVITYLFSKKER 548
>gi|289523456|ref|ZP_06440310.1| ATP-dependent DNA helicase RecG [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
gi|289503148|gb|EFD24312.1| ATP-dependent DNA helicase RecG [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
Length = 696
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 176/544 (32%), Positives = 257/544 (47%), Gaps = 81/544 (14%)
Query: 204 EPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFI 263
E LL K + + G+ + L G T+ LL+ FPR Y D +
Sbjct: 9 EELLCKSVRFLKGVGPKRASLLSKLGVETVEDLLYFFPRRYEDRR--------------- 53
Query: 264 GEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTR 323
+I + ++ + L +VG E T +K+ + L + GT
Sbjct: 54 -QITPIKSLEPDSYAALLVRVVGVEKKIT--------------KKRNLNLTVATVTDGTD 98
Query: 324 FTSIPFL--KSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
+ + +E +G V + GK++ N+ ++ N + E+D G+
Sbjct: 99 IAQALWFNKRGLENLLSIGTLVALFGKIK----ENYGMLQILNPEFEIIEEDALPEEMGK 154
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
PIYP GL+ LR I R L + + +P++I +G L A +G H P
Sbjct: 155 IVPIYPLTEGLSQRWLRLLIRRTLSEYLSYVEEFLPEDIVLRYGFPPLKKAILGYHYPDD 214
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
RKRL FDE F LQLG ++ + ++ P+L+ G
Sbjct: 215 ERGWKSCRKRLAFDELFLLQLG----------VAIKRRQMEEETSAPKLSC----GGPLQ 260
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
K + L + LTS+Q + +I D+ + +PMNRLLQGDVG GKTV+A LA + + +G
Sbjct: 261 MKFVENCLNFKLTSAQEMVLGDICVDIFRKIPMNRLLQGDVGSGKTVIAVLAMLAAVDTG 320
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQAA MVPTE+LA QHY + L + + + LLT S ++ +D+++G
Sbjct: 321 YQAAMMVPTEVLANQHYAKITNWLSKLNAE-----VTLLTSSLTPQERAKRYEDIKSGRS 375
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTHSLI E VEF L L ++DEQ RFGV+QR K Y
Sbjct: 376 RIVIGTHSLIQEGVEFRELGLVVIDEQHRFGVLQRRTLMDKGSY---------------- 419
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT-YIIEGNEKG-YE 738
PH L M+ATPIPRTLAL +YGD+SL+ I +LPPGR P++T +I +G K YE
Sbjct: 420 -------PHTLVMTATPIPRTLALTVYGDLSLSIIDELPPGRTPVRTQWIGKGKLKELYE 472
Query: 739 NVYK 742
V K
Sbjct: 473 FVKK 476
>gi|134299934|ref|YP_001113430.1| ATP-dependent DNA helicase RecG [Desulfotomaculum reducens MI-1]
gi|134052634|gb|ABO50605.1| ATP-dependent DNA helicase RecG [Desulfotomaculum reducens MI-1]
Length = 685
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 179/524 (34%), Positives = 255/524 (48%), Gaps = 90/524 (17%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
I + G+ + QLE G +T LL+HFPR Y D +
Sbjct: 8 IQYMKGVGPQRAKQLERLGIFTTWDLLYHFPREYQDRSD--------------------- 46
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGT-RFTSIPF 329
++ SFS D T G + +S ++ + + G F ++ F
Sbjct: 47 -IRPAHSFS---------QGDLATVKGTVIAAQESKPRRGLSITKLALQEGAGTFYAVWF 96
Query: 330 LKS-IEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPS 388
++ I+ ++ G+ + ++GKV R +++ + +VL+ ++ + GR PIYP
Sbjct: 97 NQTYIKKQYPPGKELLITGKVD--RKFGVPQIQVTDHEVLEGDEGMH---SGRIVPIYPL 151
Query: 389 KGGLNASLLRDTIARALQ---ALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
LN LR I L+ +L F +P + + L CL +A IH P++
Sbjct: 152 TESLNQRFLRSLIKTTLEQVGSLAREF--LPDSMLDRYNLPCLPEALREIHFPENQASCQ 209
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLL 505
AR+R I +E F +LG +K +L K +K Y+E +L+ +LL
Sbjct: 210 RARRRFIMEELFLFELG----------VNLQKGRILKKVKK----HEYIE--EALSNRLL 253
Query: 506 RALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAF 565
+LP+ LT +Q EI DLK PMNRLLQGDVG GKTV+A L + GSG Q A
Sbjct: 254 MSLPFRLTEAQKRVWREIEEDLKSSFPMNRLLQGDVGAGKTVIAALTLCKAAGSGLQGAL 313
Query: 566 MVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKD-LQTGDITLVI 624
M PTELLA QH + + LL+ M K+ALLTGS K+ R D L +GDI + I
Sbjct: 314 MAPTELLAEQHAKGIKDLLEPM-----GIKVALLTGSG--KKGRKKTLDALASGDIQVAI 366
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+LI+E V++ L L +VDEQ RFGV QR D+
Sbjct: 367 GTHALISEDVQYKNLGLVVVDEQHRFGVRQRAALQ-----------------------DK 403
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTY 728
+AP VL M+ATPIPRTLAL LYGD+ ++ I LPPGR IKT+
Sbjct: 404 GVAPDVLVMTATPIPRTLALTLYGDLDVSIIDQLPPGRQGIKTH 447
>gi|337288172|ref|YP_004627644.1| ATP-dependent DNA helicase RecG [Thermodesulfobacterium sp. OPB45]
gi|334901910|gb|AEH22716.1| ATP-dependent DNA helicase RecG [Thermodesulfobacterium geofontis
OPF15]
Length = 824
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 178/542 (32%), Positives = 254/542 (46%), Gaps = 85/542 (15%)
Query: 196 SLPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--D 253
SL + + +L + + + G+ + +L G +TL LL+ P+ Y D + D
Sbjct: 118 SLETYLRYKEILKQPVQFLKGIGPSIAKKLAKKGIHTLEDLLYFLPKDYEDRRKVIPIGD 177
Query: 254 LDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYL 313
L +GQ + GEI +K+G S + I +I D + N + +K+
Sbjct: 178 LREGQRAVVFGEI-----LKSGTSQLYKRKIFYAQITDGTGFLTLKWFNFNERVWRKLLA 232
Query: 314 HLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDD 373
K F +GE ++ + H E+ E DED
Sbjct: 233 PGKNIF------------------AIGEVSRFGKELEII----HPELIEEG-----DEDK 265
Query: 374 LSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAY 432
LS+ G P+Y S G++ R I A++ + +P EI + G + L A
Sbjct: 266 LSVEI-GHIVPVYSSIEGVSEKYFRKIIKSAIEEYGDYLESSIPLEILKRRGFVPLNVAI 324
Query: 433 MGIHQPKHIDEADLAR-------KRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYR 485
+H P+ ++ L + K L FDEFF+L+L LG ++G + K R
Sbjct: 325 KNLHFPEPKEDILLLKRGESIYHKSLSFDEFFFLELA--------LGL---RKGRIKKER 373
Query: 486 KPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGK 545
+ N S L ++ ++ LP+ LT +Q I EI D+ + VPMNRLLQGDVGCGK
Sbjct: 374 GIKFNTE-----SKLVEEFIKKLPFELTDAQKRVIEEIKNDMAKEVPMNRLLQGDVGCGK 428
Query: 546 TVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPV 605
TVVAF++ + I +GYQ AFM PTE+LA QHY + + M ALLTG P
Sbjct: 429 TVVAFISALIAIDNGYQVAFMTPTEILAEQHYYNFRQYAQLM-----GISTALLTGGIPP 483
Query: 606 KQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYT 665
+ R I L TG I VIGTH+L EKVE L L I+DEQ RFGV+QR K
Sbjct: 484 TKKREIYHGLSTGYINFVIGTHALFQEKVEIKKLGLVIIDEQHRFGVLQRAALREK---- 539
Query: 666 SMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
+ + P L M+ATPIPRTLAL +YGD+ L+ I ++P GR PI
Sbjct: 540 -----------------AKGLIPDTLIMTATPIPRTLALTIYGDLDLSIIDEMPKGRKPI 582
Query: 726 KT 727
T
Sbjct: 583 IT 584
>gi|302337840|ref|YP_003803046.1| ATP-dependent DNA helicase RecG [Spirochaeta smaragdinae DSM 11293]
gi|301635025|gb|ADK80452.1| ATP-dependent DNA helicase RecG [Spirochaeta smaragdinae DSM 11293]
Length = 707
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 146/367 (39%), Positives = 204/367 (55%), Gaps = 49/367 (13%)
Query: 380 GRPYPIYPSKGGLNASLLRDTIARALQALPANF--DPVPKEITQEFGLLCLFDAYMGIHQ 437
G P+YP GL LRD + +A++ F D +P+ I ++ GL L +A + IH+
Sbjct: 160 GSILPVYPLTEGLTQGALRDLMQQAMEGF-GKFVDDELPEAIRRDHGLPHLAEALVMIHR 218
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGW 497
P+ I+E + RK L F+E F+LQ + G L K RK R + A G
Sbjct: 219 PRRIEEPEEGRKALAFNELFHLQCA------------VTRRGALRK-RKERPSLALETG- 264
Query: 498 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
L + +R LP+SLT+ Q A+ EII DLK+P PM RLLQGDVG GKT+ A L+ + +I
Sbjct: 265 --LVDRCIRDLPFSLTADQKQAVEEIIEDLKRPYPMARLLQGDVGSGKTLTALLSALPII 322
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
+GYQ AFM PTELLA QH E+ ++L + +IAL TGS P + + LQ
Sbjct: 323 EAGYQVAFMAPTELLARQHAENSARILAPL-----GVRIALFTGSIPSPARKELLVALQE 377
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
G+I LV+GTH+L + V F LR I+DEQ +FGV+QR G+
Sbjct: 378 GEIDLVVGTHTLFSSSVRFRRLRYCIIDEQHKFGVMQR-------------QGLL----- 419
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYI--IEGNEK 735
D+ P +L M+ATPIPRT+AL +GD++++ I +PPGR PI T++ +E K
Sbjct: 420 -----DKGEFPDLLTMTATPIPRTMALTAFGDLAVSVIRTMPPGRKPIITHLAKVENRPK 474
Query: 736 GYENVYK 742
Y V K
Sbjct: 475 VYAAVEK 481
>gi|238924032|ref|YP_002937548.1| ATP-dependent DNA helicase RecG [Eubacterium rectale ATCC 33656]
gi|238875707|gb|ACR75414.1| ATP-dependent DNA helicase RecG [Eubacterium rectale ATCC 33656]
Length = 688
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 171/525 (32%), Positives = 248/525 (47%), Gaps = 84/525 (16%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
I+ V G+ ++ G YT+ +L HFPR Y F I +I
Sbjct: 7 ITAVKGIGEKTQKAFAKMGVYTVGDILLHFPRDYVK-------------FPEITDIDELN 53
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFL 330
+ +++ VI + + T+ ++ D G H+ + + +P+L
Sbjct: 54 NVNVSSTYAIYAVIKKAPV--VKNTARMQITLQDIGSPG----HMIQLV----WYRMPYL 103
Query: 331 KS--IEGKHKV--GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
K+ ++G+H + G G+ M YE+++Y + ++D +L+ P+Y
Sbjct: 104 KAQLVQGRHLIFYGHIKPKGGRY-VMEQPVVYEVQKY--EAIRD----TLQ------PVY 150
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMG-IHQPKHIDEAD 445
G+ +L+ TI L D +PK+I +G C ++ M IH P D
Sbjct: 151 SVTSGVTNNLIVKTIKETLSHDTLLSDYLPKDIRHRYGF-CEYNYAMKQIHFPDDFDALV 209
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLL 505
AR+RL+FDEFF +G YQ K+ DK + A+++G L+
Sbjct: 210 EARRRLVFDEFFLFIMGMRYQ---------NKKQQKDKNEFEFTDDAFIDG-------LI 253
Query: 506 RALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAF 565
LPY LT +Q I EI D+K P M RL+QGDVG GKT+VAFL GYQ+A
Sbjct: 254 DKLPYELTGAQKKTIDEIKQDIKSPYVMQRLIQGDVGSGKTIVAFLLMAWASKCGYQSAI 313
Query: 566 MVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIG 625
M PTE+LA QHYE L+ D + LLTGS KQ R L+ L+IG
Sbjct: 314 MAPTEVLANQHYETFCSLVSQFGLDS---PVVLLTGSMTAKQKREAYASLENEKNALIIG 370
Query: 626 THSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQH 685
TH+LI EK +FS L L I DEQ RFGV QR F+ D+
Sbjct: 371 THALIQEKADFSNLSLVITDEQHRFGVKQRESFS-----------------------DKG 407
Query: 686 MAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
PH+L MSATPIPRTLA+ +YGDM ++ I ++P R+PIK ++
Sbjct: 408 RKPHILVMSATPIPRTLAIIIYGDMDISVINEVPAKRLPIKNCVV 452
>gi|260887360|ref|ZP_05898623.1| ATP-dependent DNA helicase RecG [Selenomonas sputigena ATCC 35185]
gi|260862898|gb|EEX77398.1| ATP-dependent DNA helicase RecG [Selenomonas sputigena ATCC 35185]
Length = 711
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 160/522 (30%), Positives = 246/522 (47%), Gaps = 89/522 (17%)
Query: 216 GLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAG 275
G+ + Y L G +T+ LL ++PRTY D + L I +GE + G
Sbjct: 38 GVGAKKYEALNKIGLFTVYDLLTYYPRTYED-RRVLTPLAA----IAVGEQQAVTG---- 88
Query: 276 CSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFL--KSI 333
V IA+ T G ++++D GT F + F K +
Sbjct: 89 ---------VIRHIAERRTGRGIHILSVDIDD-------------GTGFLQVTFFNQKFL 126
Query: 334 EGKHKVGEFVCVSGKVR-AMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP-----YPIYP 387
+GK K G + GK+ A +M + D SL KG P+Y
Sbjct: 127 KGKLKAGMQLFAVGKIDYAFGGRGKKQMSQVK--------DFSLMEKGGEAALGILPVYA 178
Query: 388 SKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA 447
+ G LN R + Q + + +P+ I Q + L+ +AY +H P+ + LA
Sbjct: 179 ASGSLNQKFFRTLLTGVFQGIGKIVETLPESICQRYRLVAREEAYREVHFPESPEALHLA 238
Query: 448 RKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRA 507
R+RLIF+E + +Q G L LL + + + G S L++ A
Sbjct: 239 RERLIFEELYLIQCGLL---------------LLRRESREKRKGVRHLGASRLSRGAREA 283
Query: 508 LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMV 567
LP+ LT Q A +I D++ +PM RL+QGDV GKT +A LA ++ + +G+Q AFM
Sbjct: 284 LPFRLTEDQEKAWRDIRQDMELALPMRRLVQGDVSSGKTALALLALVKTVENGFQGAFMA 343
Query: 568 PTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTH 627
PTE+LA QH++ +LL ++ ++ LLTG K+ ++ D+ +VIGTH
Sbjct: 344 PTEILARQHFDKFSELLRDL-----PVRLLLLTGRLSKKEREAAYAAIEAHDVDIVIGTH 398
Query: 628 SLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMA 687
+LI E V F+AL L + DEQ RFGV QR + H+
Sbjct: 399 ALIQEPVAFAALGLVVTDEQHRFGVEQRAALEKR----------------------AHLT 436
Query: 688 PHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYI 729
P +L M+ATPIPRT+ L +YGD+ +++I LPPGR+P++T++
Sbjct: 437 PDMLVMTATPIPRTMTLTVYGDLDVSRIEHLPPGRVPVETFV 478
>gi|320533345|ref|ZP_08034038.1| putative ATP-dependent DNA helicase RecG [Actinomyces sp. oral
taxon 171 str. F0337]
gi|320134440|gb|EFW26695.1| putative ATP-dependent DNA helicase RecG [Actinomyces sp. oral
taxon 171 str. F0337]
Length = 752
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 171/543 (31%), Positives = 261/543 (48%), Gaps = 74/543 (13%)
Query: 217 LSKRLYHQLENCGFYTLRKLLHHFPR---TYADLQNAQIDLDDGQYFIFIGEII--SSRG 271
+ KR QL G T LL PR T+ +L + + L +G+ +++ SSR
Sbjct: 5 VGKRTAAQLAKQGVETGADLLRLLPRRYDTWGELTDMRT-LVEGEQATIQAQVVRASSRR 63
Query: 272 MKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLK 331
++G + +E V T G +++ +F + ++
Sbjct: 64 TRSGRVPALMEATV---------TDGASTMDL------------------VQFGATGQMR 96
Query: 332 SIEGKHKVGEFVCVSGKVRAMRSNNHYEM-REYNIDVLKDEDDLSLRAKGRPYPIYPSKG 390
+ + G V +SGKV R R Y +D L + + +L A RP PIYP
Sbjct: 97 ARASQLAPGTTVLLSGKVGLHRGRKQLSNPRLYVLDELDEAEREALLA--RPMPIYPGTE 154
Query: 391 GLNASLLRDTIARALQAL-PANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLAR 448
L + L+ + L L P + DP+P+E+ +E GL+ + AY +H+P+ + AR
Sbjct: 155 ALPSWLVAKAVRIVLDQLEPGDVADPIPEELRREMGLVDAYTAYRWVHRPEDSRQWKAAR 214
Query: 449 KRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYM--EGWSSLTKKLLR 506
RL +E LQ+ L Q + R A+ E SL L
Sbjct: 215 SRLRHEEALILQVA-LAQRRA-------------HHEATRTAVAWPVPETEDSLRADLDA 260
Query: 507 ALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFM 566
LPY LT+ Q EI DL + VPM RLLQGDVG GKT+VA A ++VIG G QAA +
Sbjct: 261 RLPYDLTAGQERVGREISADLARTVPMQRLLQGDVGSGKTLVALRAMLQVIGGGGQAALL 320
Query: 567 VPTELLATQHYEHLLKLLDNMEE------DKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
PTE+LA QH+ L +L M + ++ LLTGSTP Q R I DL G+
Sbjct: 321 APTEVLAAQHHSSLEAVLGPMARLGMLGGAERATRVHLLTGSTPTAQRRQILADLAAGEP 380
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+V+GTH+L+++ V+ L L +VDEQ RFGV QR + T ++G
Sbjct: 381 AIVVGTHALLSDTVQIPFLGLVVVDEQHRFGVAQRDALRERGGLTDPATG---------- 430
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGY-EN 739
Q PH+L M+ATPIPRT+A+ ++GD++ + + +LP GR + T+++ + + E
Sbjct: 431 ---QSHTPHLLVMTATPIPRTIAMTVFGDLATSVLDELPAGRSAVPTHLVPWSRISWVEG 487
Query: 740 VYK 742
+++
Sbjct: 488 IWR 490
>gi|297617077|ref|YP_003702236.1| ATP-dependent DNA helicase RecG [Syntrophothermus lipocalidus DSM
12680]
gi|297144914|gb|ADI01671.1| ATP-dependent DNA helicase RecG [Syntrophothermus lipocalidus DSM
12680]
Length = 687
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 173/536 (32%), Positives = 262/536 (48%), Gaps = 97/536 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L+K I + G+ + L+ G ++ +L H PR Y D A+ LD I +G++
Sbjct: 8 LEKSIRFIKGVGPGRFASLQRLGIESVWDMLWHVPRHYFDWAAAK-GLDQ----IRVGQV 62
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVN--IDSGQKKKIYLHL-KKFFRGTR 323
+ +G+ S T++ G VV ++ G + + +++ +
Sbjct: 63 NTVKGIVKSISL-------------TKSARGTVVVKAWLEDGNAGIVAVWFNQRYIKQVL 109
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY 383
IP L V+GKV +R N + +Y +L + Y
Sbjct: 110 HPGIPIL--------------VTGKVNMIRGNPELWVSQYE----------TLNSGSPAY 145
Query: 384 -----PIYPSKGGLNASLLRDTIARALQ----ALPANFDPVPKEITQEFGLLCLFDAYMG 434
P YPS GLN +LR + +Q P DPV + + GL+ + A
Sbjct: 146 RVGIVPFYPSTEGLNQRVLRSIAYQVVQEYAEKYPDIIDPVAR---KRIGLIDIESAIRN 202
Query: 435 IHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYM 494
+H PK++ + + AR+RL F+E Q + Q+ + + G+ A++
Sbjct: 203 LHFPKNVLDVEPARRRLAFEELLLWQWN-VRQLKNRARGELKGRGV-----------AHL 250
Query: 495 EGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACM 554
G L ++++ ALP+ LT +Q ++EI DL +P PMNRLLQGDVG GKTVVA LA
Sbjct: 251 GG-DELVEQVISALPFQLTKAQRRVLAEIRDDLTRPDPMNRLLQGDVGSGKTVVAALAAA 309
Query: 555 EVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKD 614
++ G GYQ AFM PTE+LA QHY LL+L+ + ++ALLTG TP + R I +
Sbjct: 310 KMAGDGYQIAFMAPTEILAVQHYNSLLRLVSRV-----PIRVALLTGKTPYSEKRKIVEM 364
Query: 615 LQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMV 674
+ ++ +++GTH+LI + VEF+ L L ++DEQQRFGV QR K G
Sbjct: 365 AKRHELDILVGTHALITDTVEFARLGLVVIDEQQRFGVKQRASLVGK------GKGY--- 415
Query: 675 NSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
P L MSATPIPRTLALAL GDM ++ I ++PPGR ++T+ I
Sbjct: 416 -------------PDTLVMSATPIPRTLALALCGDMDVSIIDEIPPGRKRVRTFFI 458
>gi|124023369|ref|YP_001017676.1| ATP-dependent DNA helicase RecG [Prochlorococcus marinus str. MIT
9303]
gi|123963655|gb|ABM78411.1| ATP-dependent DNA helicase recG [Prochlorococcus marinus str. MIT
9303]
Length = 846
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 175/530 (33%), Positives = 258/530 (48%), Gaps = 61/530 (11%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L+ +S V G+ +L +L G ++ LL ++PR Y D + +
Sbjct: 147 LESPLSEVKGIGPKLAERLAGLGLLLVKDLLQYYPRDYVDYSS----------------L 190
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
+ ++AG + + + + C + ++ + Q L +++FF G RF+S
Sbjct: 191 RRIQALEAGEAATIVATVRRCHGFTSPRNPNLSILELQL-QDPTGRLKVRRFFAGRRFSS 249
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKD-EDDLSLRAKGRPYPI 385
+LKS + G V VSG V+ ++ + I+V++ L ++ GR P+
Sbjct: 250 PAYLKSQSRLYPPGVTVAVSGLVKGGPYGMSFQ--DPLIEVMESPHSPLRSQSIGRLLPV 307
Query: 386 YPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
Y GL A RD + + L + + +P+ Q L DA + IH P
Sbjct: 308 YALTEGLTADRFRDLVRQVLPLAASWPESLPEPRRQALRLPSRSDALIAIHHPDDQHTLQ 367
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLL 505
AR+RL+FDEF LQLG L + E L P L A L + L
Sbjct: 368 SARRRLVFDEFLLLQLGLLKRRAE-----------LRSCSAPVLQTAGQR--DGLVARFL 414
Query: 506 RALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAF 565
LP+ LT +Q + EI DL PM RL+QGDVG GKTVVA A + + +G+Q AF
Sbjct: 415 ELLPFPLTGAQQRVLREIEADLVLSEPMARLIQGDVGSGKTVVAIAALLTAVEAGWQGAF 474
Query: 566 MVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIG 625
M PTE+LA QHY L L + + LLTG+T + R I DL G + +++G
Sbjct: 475 MAPTEVLAEQHYRTLCCWLPQLHV-----SVELLTGATTRIRRRQILDDLVNGSLKILVG 529
Query: 626 THSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQH 685
TH+LI + V FS L L +VDEQ RFGV QR R +K
Sbjct: 530 THALIEDPVAFSRLGLVVVDEQHRFGVKQRNRLLNK-----------------------G 566
Query: 686 MAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
+ PH+L M+ATPIPRTLAL+L+GD+ ++QI +LPPGR PI+T +I G ++
Sbjct: 567 LQPHLLTMTATPIPRTLALSLHGDLDVSQIDELPPGRTPIQTQMIRGCDR 616
>gi|330838664|ref|YP_004413244.1| ATP-dependent DNA helicase RecG [Selenomonas sputigena ATCC 35185]
gi|329746428|gb|AEB99784.1| ATP-dependent DNA helicase RecG [Selenomonas sputigena ATCC 35185]
Length = 685
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 160/522 (30%), Positives = 246/522 (47%), Gaps = 89/522 (17%)
Query: 216 GLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAG 275
G+ + Y L G +T+ LL ++PRTY D + L I +GE + G
Sbjct: 12 GVGAKKYEALNKIGLFTVYDLLTYYPRTYED-RRVLTPLAA----IAVGEQQAVTG---- 62
Query: 276 CSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFL--KSI 333
V IA+ T G ++++D GT F + F K +
Sbjct: 63 ---------VIRHIAERRTGRGIHILSVDIDD-------------GTGFLQVTFFNQKFL 100
Query: 334 EGKHKVGEFVCVSGKVR-AMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP-----YPIYP 387
+GK K G + GK+ A +M + D SL KG P+Y
Sbjct: 101 KGKLKAGMQLFAVGKIDYAFGGRGKKQMSQVK--------DFSLMEKGGEAALGILPVYA 152
Query: 388 SKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA 447
+ G LN R + Q + + +P+ I Q + L+ +AY +H P+ + LA
Sbjct: 153 ASGSLNQKFFRTLLTGVFQGIGKIVETLPESICQRYRLVAREEAYREVHFPESPEALHLA 212
Query: 448 RKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRA 507
R+RLIF+E + +Q G L LL + + + G S L++ A
Sbjct: 213 RERLIFEELYLIQCGLL---------------LLRRESREKRKGVRHLGASRLSRGAREA 257
Query: 508 LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMV 567
LP+ LT Q A +I D++ +PM RL+QGDV GKT +A LA ++ + +G+Q AFM
Sbjct: 258 LPFRLTEDQEKAWRDIRQDMELALPMRRLVQGDVSSGKTALALLALVKTVENGFQGAFMA 317
Query: 568 PTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTH 627
PTE+LA QH++ +LL ++ ++ LLTG K+ ++ D+ +VIGTH
Sbjct: 318 PTEILARQHFDKFSELLRDL-----PVRLLLLTGRLSKKEREAAYAAIEAHDVDIVIGTH 372
Query: 628 SLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMA 687
+LI E V F+AL L + DEQ RFGV QR + H+
Sbjct: 373 ALIQEPVAFAALGLVVTDEQHRFGVEQRAALEKR----------------------AHLT 410
Query: 688 PHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYI 729
P +L M+ATPIPRT+ L +YGD+ +++I LPPGR+P++T++
Sbjct: 411 PDMLVMTATPIPRTMTLTVYGDLDVSRIEHLPPGRVPVETFV 452
>gi|222529215|ref|YP_002573097.1| ATP-dependent DNA helicase RecG [Caldicellulosiruptor bescii DSM
6725]
gi|222456062|gb|ACM60324.1| ATP-dependent DNA helicase RecG [Caldicellulosiruptor bescii DSM
6725]
Length = 679
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 178/538 (33%), Positives = 255/538 (47%), Gaps = 103/538 (19%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFI 263
+L+K I + G+ + + G LL H PR Y D + +L DG+ F+
Sbjct: 3 VLEKDIRFLKGVGENREKLFKKLGIKKAEDLLWHIPRKYLDYSRLKKIRELCDGEIESFV 62
Query: 264 GEI------ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK 317
++ I +R +K I+ + D+ N D
Sbjct: 63 AKVAGKPVEIETRSVK----------IIKIPVEDSTGVVTTVWFNQD------------- 99
Query: 318 FFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDE---DDL 374
++K++ K GE C SGK+ E + + I+V E D
Sbjct: 100 -----------YIKNV---LKEGEVFCFSGKI---------ERKGFYIEVKNPEFEKYDQ 136
Query: 375 SLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYM 433
L GR P+Y S GL+ ++R+ + LQ + D +P I Q++ L + A
Sbjct: 137 HLIHTGRIVPVYNSTEGLSQKVIRNIVNNLLQQVDGMLIDIIPPYIRQKYNLSEINFAIK 196
Query: 434 GIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAY 493
IH P++ +LARKRL+F+EF YL L + E + + EG+
Sbjct: 197 NIHFPENKLSLELARKRLVFEEF-YLLQLSLLLLKENIE---KNEGI------------K 240
Query: 494 MEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLAC 553
+E S K+ + LP+ LT +Q ++EI DL+ MNRL+QGDVGCGKTVVA +
Sbjct: 241 IENVQSSLKEFEKLLPFELTEAQKRVLAEIAQDLESTKQMNRLIQGDVGCGKTVVALASA 300
Query: 554 MEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRK 613
I +GYQ A M PTE+LA QHY K DN K + LL GSTP K+ +I K
Sbjct: 301 YATIKAGYQVALMAPTEVLALQHYNECKKYFDN------KFNVRLLIGSTPKKEKEIILK 354
Query: 614 DLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAM 673
+L+ G +VIGTH+LI + V+F L LAI DEQ RFGV+QR K
Sbjct: 355 ELEHGLCKMVIGTHALIQDDVKFKNLGLAITDEQHRFGVIQRVELTKK------------ 402
Query: 674 VNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
GS +P++L M+ATPIPRTL+L LYGD+ ++ I LPPGR I TY ++
Sbjct: 403 ----GS-------SPNILVMTATPIPRTLSLVLYGDLDISIIDQLPPGRKKILTYAVD 449
>gi|320107807|ref|YP_004183397.1| ATP-dependent DNA helicase RecG [Terriglobus saanensis SP1PR4]
gi|319926328|gb|ADV83403.1| ATP-dependent DNA helicase RecG [Terriglobus saanensis SP1PR4]
Length = 747
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 179/544 (32%), Positives = 262/544 (48%), Gaps = 98/544 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFIG 264
L + V G+ +R L G T+ LL+H P Y D + + +L G+ IG
Sbjct: 3 LSTHVKFVKGVGERNAAALVQRGVETVEDLLYHLPFRYEDRLHPRPIAELKAGEMASVIG 62
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
E+ S + S E+ V + + +FRGT
Sbjct: 63 EVRGSVLLHT-RSMPLFEMTVAQGVDTVKAM----------------------WFRGT-- 97
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSN-NHYEMREYNIDVLKD---EDDLSLRAKG 380
+LK K K+G+ V + GK+ RSN ++M + ++L + E + G
Sbjct: 98 ----YLKD---KFKLGQTVALYGKMEPSRSNAGKFKMLQPQFEILPEPGEEGGFEMLEMG 150
Query: 381 RPYPIYPSKGG-------LNASLLRDTIARALQALPANF---DPVPKEITQEFGLLCLFD 430
R P+Y + GG L + +R + L+ L +P+P + ++ GL+ +
Sbjct: 151 RIVPVYETLGGTTAWGAKLGSKWMRRVVWDVLEELGREGTLDEPLPGALRKKLGLMDRLE 210
Query: 431 AYMGIHQPKH----ID---EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDK 483
A +H P+ +D A A +RLIF+E FYL+LG LE L K
Sbjct: 211 ALRRVHFPEAGTSMVDLQSSATPAHRRLIFEELFYLELG-----LE----------LKRK 255
Query: 484 YRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGC 543
+ R + G + + + + R LP+ T +Q + EI+ D+++P PM RLLQGDVG
Sbjct: 256 RMRERTGVPFTTG-TKVREAIKRVLPFHPTPAQKRVLGEIVADMQKPQPMRRLLQGDVGS 314
Query: 544 GKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGST 603
GKT+VA A + I +GYQAA M PTE+LATQHY KLL + + LLTGS
Sbjct: 315 GKTIVAMQAAIVAIENGYQAALMAPTEILATQHYLSAKKLLGD------SYTVTLLTGSL 368
Query: 604 PVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLY 663
+Q R+ R+ + G+ LV+GT +LI EKV+F+ L L IVDEQ RFGV QR
Sbjct: 369 DAQQKRLNRRKIFAGESELVVGTQALIQEKVDFANLGLVIVDEQHRFGVRQR-------- 420
Query: 664 YTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRI 723
+T M K P VL M+ATPIPRTLA+ +YGD+ ++ + +LPPGR
Sbjct: 421 FTLM-------------KKPGTGDPDVLVMTATPIPRTLAMTVYGDLDVSVLDELPPGRT 467
Query: 724 PIKT 727
PI T
Sbjct: 468 PIVT 471
>gi|282855835|ref|ZP_06265137.1| ATP-dependent DNA helicase RecG [Pyramidobacter piscolens W5455]
gi|282586349|gb|EFB91615.1| ATP-dependent DNA helicase RecG [Pyramidobacter piscolens W5455]
Length = 694
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 145/360 (40%), Positives = 196/360 (54%), Gaps = 46/360 (12%)
Query: 377 RAKGRPYPIYPSKGGLNASLLRDTIARALQAL-PANFDPVPKEITQEFGLLCLFDAYMGI 435
R+ GR P+Y + GLN LR I L+ L P D +P I ++F + A +
Sbjct: 147 RSVGRIVPVYSATAGLNEKWLRRVIDTVLETLAPTIADILPPPIVEKFHFIDAASAVRQM 206
Query: 436 HQPKHIDEA--DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAY 493
HQP DEA AR+RL+F+EFF LQ+G + + G L+K A
Sbjct: 207 HQPT--DEALFRAARQRLVFEEFFLLQVGLALR---------HRRGCLEK------KAPA 249
Query: 494 MEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLAC 553
+ G + LT+K L LP+ LT Q EI D+++ VPMNRLLQGDVG GKTVVA +A
Sbjct: 250 LAGQADLTRKFLAELPFELTDDQRRVAQEIADDMRRSVPMNRLLQGDVGSGKTVVAVMAL 309
Query: 554 MEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRK 613
++ + SG QAA M PT +LA QH L + L + + + LLTG + + I +
Sbjct: 310 LQALDSGVQAAMMAPTAVLAQQHALTLNRWLAPLGVE-----VGLLTGGVAPAEKKKIHE 364
Query: 614 DLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAM 673
L G + +V+GTH+LI E V F L L ++DEQ RFGV+QR NSK +G
Sbjct: 365 QLSDGTLRVVVGTHALIQEAVSFKRLGLIVIDEQHRFGVLQRKALNSK-------AGAE- 416
Query: 674 VNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN 733
APH L M+ATPIPRTLAL++YGD++++ I LP GR PIK+ I N
Sbjct: 417 -------------APHTLVMTATPIPRTLALSVYGDLAVSTIRQLPSGRQPIKSVWIGDN 463
>gi|146296794|ref|YP_001180565.1| ATP-dependent DNA helicase RecG [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410370|gb|ABP67374.1| ATP-dependent DNA helicase RecG [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 679
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 179/543 (32%), Positives = 256/543 (47%), Gaps = 113/543 (20%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFI 263
LL+K I + G+ + G + LL H PR Y D + +L DG+ F+
Sbjct: 3 LLEKEIRYLKGVGESREKLFRKLGIKKVEDLLWHIPRKYLDYSKLKKIKELSDGEIESFV 62
Query: 264 GEI------ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK 317
G + I ++ +K I+ + D G VV
Sbjct: 63 GTVCGKPTEIETKSVK----------IIKIPVED-----GTGVVT--------------- 92
Query: 318 FFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDE---DDL 374
T + + ++KS+ K GE C SGK+ E R + I+V E D
Sbjct: 93 ----TVWFNQDYIKSV---LKEGEVFCFSGKI---------ERRGFYIEVKNPEFEKYDQ 136
Query: 375 SLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYM 433
+L GR P+Y S GL+ ++R+ + L+ + D +P I Q++ L + A
Sbjct: 137 NLLHTGRIVPVYNSTEGLSQKVMRNIVNNLLEQVEGQLGDVIPPYIRQKYHLSEINFAMR 196
Query: 434 GIHQPKHIDEADLARKRLIFDEFFYLQLGRL-----YQMLEGLGTQFEKEGLLDKYRKPR 488
IH P ++ LAR+RL+F+EF+ LQL L + EG+ Q KE +
Sbjct: 197 NIHFPDNMLSLSLARRRLVFEEFYLLQLSLLLLKENIEKNEGVKVQNAKENI-------- 248
Query: 489 LNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVV 548
++ R LP+ LT++Q + EI DL+ MNRL+QGDVGCGKTVV
Sbjct: 249 -------------EEFKRLLPFELTNAQKRVLDEIADDLESSKQMNRLIQGDVGCGKTVV 295
Query: 549 AFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQS 608
A A I GYQ A M PTE+LA QHY K N + LL GSTP K+
Sbjct: 296 ALAAAYATIKGGYQVALMAPTEVLAIQHYNESKKYFKN------GINVRLLIGSTPKKEK 349
Query: 609 RMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMS 668
+I K+++ G +VIGTH+LI E V+F L LAI DEQ RFGV+QR K
Sbjct: 350 EVILKEIEYGLCHMVIGTHALIQEDVKFKNLGLAITDEQHRFGVIQRVELTKK------- 402
Query: 669 SGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTY 728
G+ +P++L M+ATPIPRTL+L LYGD+ ++ I ++PPGR I TY
Sbjct: 403 ---------GN-------SPNILVMTATPIPRTLSLVLYGDLDISIIDEMPPGRKKILTY 446
Query: 729 IIE 731
++
Sbjct: 447 AVD 449
>gi|343522594|ref|ZP_08759560.1| putative ATP-dependent DNA helicase RecG [Actinomyces sp. oral
taxon 175 str. F0384]
gi|343402003|gb|EGV14509.1| putative ATP-dependent DNA helicase RecG [Actinomyces sp. oral
taxon 175 str. F0384]
Length = 775
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 171/554 (30%), Positives = 269/554 (48%), Gaps = 76/554 (13%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPR---TYADLQNAQIDLDDGQYFIF 262
LL++ ++ + G KR QL G T LL PR T+ +L + + L +G+
Sbjct: 19 LLERPVTRLVG--KRTAAQLAKQGVETGADLLRLLPRRYDTWGELTDMRT-LVEGEQATI 75
Query: 263 IGEII--SSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFR 320
+++ SSR ++G + +E V T G +++
Sbjct: 76 QAQVVRASSRRTRSGRVPALMEATV---------TDGASTMDL----------------- 109
Query: 321 GTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEM-REYNIDVLKDEDDLSLRAK 379
+F + +++ + G V +SGKV R R Y +D L +++ +L A
Sbjct: 110 -VQFGAAGQMRARAAQLAPGTTVLLSGKVGLHRGRKQLSNPRLYVLDELDEDEREALLA- 167
Query: 380 GRPYPIYPSKGGLNASLLRDTIARALQAL-PANF-DPVPKEITQEFGLLCLFDAYMGIHQ 437
RP PIYP L + L+ + L L P + DP+P+E+ +E L+ + AY +H+
Sbjct: 168 -RPMPIYPGTEALPSWLVAKAVRSVLDQLEPGDVADPLPEELRREAELVDAYTAYRWVHR 226
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYM--E 495
P+ + +ARKRL +E LQ+ L Q + R A+ E
Sbjct: 227 PEDSGQWKVARKRLRHEEALILQVA-LAQRRA-------------HHEATRTAVAWPVPE 272
Query: 496 GWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
SL L LPY LT+ Q EI DL + VPM RLLQGDVG GKT+VA A ++
Sbjct: 273 AEGSLRADLDARLPYDLTAGQKRVGEEISADLARTVPMQRLLQGDVGSGKTLVALRAMLQ 332
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEE------DKHKPKIALLTGSTPVKQSR 609
V+G G Q A + PTE+LA QH+ L +L M + ++ LLTGSTP Q R
Sbjct: 333 VVGGGGQTALLAPTEVLAAQHHSSLEAVLGPMARLGMLGGAERATRVHLLTGSTPAAQRR 392
Query: 610 MIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSS 669
I +L G+ +V+GTH+L+++ V+ L L +VDEQ RFGV QR + T ++
Sbjct: 393 RILTELAAGEPAIVVGTHALLSDTVQIPFLGLVVVDEQHRFGVAQRDALRERGGLTDPAT 452
Query: 670 GMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYI 729
G Q PH+L M+ATPIPRT+A+ ++GD++ + + +LP GR + T++
Sbjct: 453 G-------------QTHTPHLLVMTATPIPRTIAMTVFGDLATSVLDELPAGRSAVPTHL 499
Query: 730 IEGNEKGY-ENVYK 742
+ + + E +++
Sbjct: 500 VPWSRTSWVEGIWR 513
>gi|269798117|ref|YP_003312017.1| ATP-dependent DNA helicase RecG [Veillonella parvula DSM 2008]
gi|269094746|gb|ACZ24737.1| ATP-dependent DNA helicase RecG [Veillonella parvula DSM 2008]
Length = 680
Score = 232 bits (591), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 167/531 (31%), Positives = 250/531 (47%), Gaps = 83/531 (15%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFIG 264
+D+ ++ + G+ QL G + LL +FPRTY D + DL G +G
Sbjct: 1 MDERLTTIKGIGPGREKQLHKLGITNVTSLLTYFPRTYEDRRTMYRIGDLKSGMTGGVVG 60
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
+I+ + + S LEV+ IAD T ++V + G KK Y
Sbjct: 61 TVIAVQEKRPRPRLSILEVV----IADG--TGPLKIVLFNQGYKKNFY------------ 102
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
K G+ + GK + Y + N +++ D +G P
Sbjct: 103 -------------KKGQRIYAYGK-----AEFQYGTMQMNTPQMENLGDSGEPDRG-IVP 143
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
IY G++ ++R ++ A + +P E+ + + +DA+ +H P +
Sbjct: 144 IYALADGVSQFVVRSSVRNWFAANHELPEILPVEVRESHHYMSRYDAFKMMHFPDSSEHY 203
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
AR +L ++E F +Q GL KE +R P++ L +
Sbjct: 204 KEARHQLAYEELFVMQ--------AGLALLRSKEQC---HRGPKMGPN-----GELMARC 247
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
+ LP+SLT Q A+ +I D++ PM RLLQGDVG GKT+VA L ++ I +GYQ A
Sbjct: 248 IENLPFSLTGDQQRALEDIRIDMEDERPMQRLLQGDVGSGKTIVATLGLLKAIENGYQGA 307
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
M PTE+LA QHYE + + N+ I LLTGST K+ I + L G I ++I
Sbjct: 308 LMAPTEILAAQHYEGIRTVCANL-----GITIELLTGSTTKKEKECIYEGLADGSIHMII 362
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+LI E V F L L I+DEQ RFGV QR R K Y
Sbjct: 363 GTHALIQENVNFHNLGLVIIDEQHRFGVEQRARLQQKGTY-------------------- 402
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
PHVL M+ATPIPRT+ L++YGD++++ I ++PPGR P+KTY ++ + K
Sbjct: 403 ---PHVLIMTATPIPRTMTLSVYGDLAVSLIKEMPPGRKPVKTYAVDSSYK 450
>gi|338534601|ref|YP_004667935.1| ATP-dependent DNA helicase RecG [Myxococcus fulvus HW-1]
gi|337260697|gb|AEI66857.1| ATP-dependent DNA helicase RecG [Myxococcus fulvus HW-1]
Length = 940
Score = 232 bits (591), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 172/538 (31%), Positives = 255/538 (47%), Gaps = 92/538 (17%)
Query: 217 LSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFIGEIISSRGMKA 274
L RL L+ G + +L PR Y D + + +L+ G+ + +G + + +
Sbjct: 256 LGPRLVSALDKKGLRRMGDILFMLPRCYEDRRRLRTIAELEPGERGVTVGTVKVADFVPG 315
Query: 275 GCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIE 334
+VG SG Y F + P+LKS
Sbjct: 316 RQGRRMFRAVVGDR----------------SGSIAATY-----------FNAGPWLKS-- 346
Query: 335 GKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNA 394
+ VG+ + +SG+VRA S EM I+ +D D + R P+YP
Sbjct: 347 -RFTVGKRIVLSGEVRATMSGR--EMAHPEIEPAEDLDSTASVHFNRIVPVYPGFERGEQ 403
Query: 395 SLLRDTIARALQALPANFD-PVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL------- 446
R+ +R + D P+P ++ + L+ L DA IH P +ADL
Sbjct: 404 RSFRELTSRVGEQFAHELDDPLPPDLRRRLDLMGLPDALRFIHFPP--GDADLEALDAHQ 461
Query: 447 --ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
A +RL FDE F+LQLG L+ G + E G+ +PRL A
Sbjct: 462 SPAHRRLAFDELFFLQLG---MALKRQGVKAEV-GIAFDVSEPRLEKARG---------- 507
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
ALP+ LT +Q + E+ D+ + PMNRL+QGDVG GKT VA ++ + + +GYQ A
Sbjct: 508 --ALPFKLTDAQARVVEELCRDMARAEPMNRLVQGDVGSGKTAVAMVSALVALQAGYQVA 565
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
M PTE+LA QH + K+++ + ++ L++ + K R +R+ + G+I L +
Sbjct: 566 VMAPTEILAEQHERNFRKVMEPLGY-----RVGLISAAGTAKAKRQVREAVGRGEIHLAV 620
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+L+ + V F L LA++DEQ RFGV+QR +T MS G PK
Sbjct: 621 GTHALLQDDVSFERLGLAVIDEQHRFGVLQR--------HTLMSKG---------PK--- 660
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKG--YENV 740
P VL M+ATPIPRTLA+ LYGD+ L+ I LPPGR PIKT + ++ YE+V
Sbjct: 661 ---PDVLVMTATPIPRTLAMTLYGDLDLSVIDQLPPGRTPIKTRVFNDKQRALVYESV 715
>gi|153954009|ref|YP_001394774.1| ATP-dependent DNA helicase RecG [Clostridium kluyveri DSM 555]
gi|146346890|gb|EDK33426.1| Hypothetical protein CKL_1384 [Clostridium kluyveri DSM 555]
Length = 679
Score = 231 bits (590), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 169/536 (31%), Positives = 263/536 (49%), Gaps = 90/536 (16%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
I + G+ L +C + + LL +FPR Y + N DL+
Sbjct: 7 IKSIKGVGAVTAGTLNSCCIFNILDLLLYFPRDYEIISNCS-DLN--------------- 50
Query: 271 GMKAGCSFSFLEVIVGCEIA----DTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
K G +VI+ C + D T S + + ++ + F+G F
Sbjct: 51 --KVGTG----KVIMDCRVKSIGKDIRTKSKKILSTV-------VFENESGTFQGKWFNQ 97
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
P++K+ K K+ + + GK+ R N + N ++ +E ++ + + + PIY
Sbjct: 98 -PYMKN---KFKINKVYRIMGKIE--RFNGSISI--MNPTLVSNE--VNSKKEDKIIPIY 147
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL 446
P K G+ ++L I++ + + + +P I +++ L A IH+P I+E +
Sbjct: 148 PLKSGITNNILIKLISKVIHEVDIE-ENLPTWIIKKYKFCSLNKAIKAIHKPGSIEELEE 206
Query: 447 ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLR 506
A++RL F E F L L ML+ ++ K+G+ K +S K+L +
Sbjct: 207 AKRRLKFQELFSYSLKIL--MLKNYHSR-NKKGIAFKI-------------ASELKELKK 250
Query: 507 ALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFM 566
+PY LT SQ I EI+ D K PMNRLLQGDVG GKT+VA +A V+ +GYQA FM
Sbjct: 251 RIPYELTKSQNKVIREILLDEKMESPMNRLLQGDVGSGKTIVAIIAIFNVVKNGYQAVFM 310
Query: 567 VPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGT 626
PTE+LA QHYE K L + + I LL GS + +++++DL+ G I ++IGT
Sbjct: 311 APTEILAKQHYEECKKFLQDTGVN-----IQLLCGSVTERNKKILKEDLKYGKIDIIIGT 365
Query: 627 HSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHM 686
H+LI + VEF + + + DEQ RFGV QR + +K Y
Sbjct: 366 HALIEDDVEFKNIGMVVTDEQHRFGVAQRSKLINKGKYVD-------------------- 405
Query: 687 APHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYK 742
L M+ATPIPRTL+L L+GD++++ I +LPPGR I TY + +K + VYK
Sbjct: 406 ---TLVMTATPIPRTLSLCLHGDLNISIIDELPPGRKKIHTYYTD--KKSKDRVYK 456
>gi|422843994|ref|ZP_16890704.1| DNA helicase RecG [Lactobacillus delbrueckii subsp. lactis DSM
20072]
gi|325685873|gb|EGD27939.1| DNA helicase RecG [Lactobacillus delbrueckii subsp. lactis DSM
20072]
Length = 679
Score = 231 bits (590), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 171/528 (32%), Positives = 265/528 (50%), Gaps = 99/528 (18%)
Query: 209 KCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGEII 267
+ ++ + G+ + L++ G Y++ LL +FP Y +L+N +D L+DGQ + G I+
Sbjct: 9 RPVTALKGVGAKTAEALQSLGIYSIYDLLFYFPYRYDELENLPLDQLEDGQKVMLKG-IV 67
Query: 268 SSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
++ + + V I +++ ++ F +
Sbjct: 68 ATNPYQNYFGYHKSRVSFKLRI-------DHDIIMVN-------------------FFNQ 101
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMRE-----YNIDVLKDEDDLSLRAKGRP 382
P+L + VG+ + V GK Y++R+ Y + V K+ DD G
Sbjct: 102 PWLTK---QLSVGQEIAVYGK---------YDLRKQSLSAYKLLVNKNSDD------GMA 143
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
PIY + L+ I A+ +++ + VP+++ + + L+ D + +H PK +
Sbjct: 144 -PIYSVNRQIKQKKLQTMIDLAIAESMDEMGNAVPEDLRKHYRLMADQDLVIAMHHPKDL 202
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWS-SL 500
EA AR+ +F EFF L+QM L + K ++ Y + +
Sbjct: 203 TEAKEARRSAVFREFF------LFQMQLALMSSQNKS-----------HSGYAKHYDLEE 245
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
KL ++LP++L+ Q I+EI D+ M RLLQGDVG GKTVVA A + +G
Sbjct: 246 IGKLTKSLPFALSPDQKKVINEIFADMFVDQQMQRLLQGDVGSGKTVVAVFAIYGAVTAG 305
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQAA MVPTE+LA QHY + +L++ ++ALLTGST + R I K+L G I
Sbjct: 306 YQAALMVPTEILANQHYHKISAMLEDF-----GVRVALLTGSTKTMERREIYKELADGSI 360
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+LI E+V F L L I+DEQ RFGVVQR +A++N
Sbjct: 361 NVVIGTHALIQEQVAFKKLGLVIIDEQHRFGVVQR---------------LALIN----- 400
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTY 728
K D+ P +LAM+ATPIPR+LAL +YGD +L++I LP GR PIK+Y
Sbjct: 401 KGDR---PDILAMTATPIPRSLALTVYGDTALSEIRHLPAGRKPIKSY 445
>gi|406998622|gb|EKE16540.1| hypothetical protein ACD_11C00004G0038 [uncultured bacterium]
Length = 703
Score = 231 bits (590), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 177/554 (31%), Positives = 265/554 (47%), Gaps = 95/554 (17%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYAD-LQNAQI-DLDDGQYFIFIG 264
L + +P ++ R LE G T+ LL HFP Y D + I +L G G
Sbjct: 4 LQTPLKNIPKINFRYRQTLERLGIRTIHDLLSHFPFRYDDYTETVSISNLQTGLVATIEG 63
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
EII SR ++ ++ I C I D ++G + R F
Sbjct: 64 EIIESRQIR---TWKKRMRIAECHIKD------------NTG-----------YVRAVWF 97
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
PF+ + K K V +SGKV + ++ + + + + GR P
Sbjct: 98 NQ-PFVANSLTKEKR---VRISGKVSSDKNGMFFSNPSWENSTRQPTNT------GRLVP 147
Query: 385 IYPSKGGLNASLLR---DTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
+YP GL + LR T R + +P DPVPK+I QE L L A IH PK
Sbjct: 148 VYPETEGLTSKWLRWQIQTFLRLAKNIP---DPVPKKILQETHLPSLSAALQYIHFPKTE 204
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
E +A+KR F E +Q+ Q K N ++ME +++
Sbjct: 205 KEYLIAQKRFAFQEMLTVQIT---------SAQIRNSWKKQSAEKIPFNPSFMENFTA-- 253
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
+LP+ LT++Q ++++I DL++ PMNRLL GDVG GKT+VA +A + + +
Sbjct: 254 -----SLPFELTNAQKKSVAQIFKDLEKDQPMNRLLNGDVGSGKTLVAAMAALSCAKNNF 308
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGS---------TPVK-QSRMI 611
Q A M PTE+LA QH+E + KL +K K IALLT S + K +S++
Sbjct: 309 QVALMAPTEVLARQHFESISKLF-----EKQKIPIALLTNSYKQINNFENSNFKIESKLN 363
Query: 612 RKDL----QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSM 667
R +L ++GDI+++IGTH++I + + F L L IVDEQ RFGV QR ++
Sbjct: 364 RNNLLDKIKSGDISIIIGTHAIIQKDIRFKNLALIIVDEQHRFGVAQRAYLQQEIKNI-- 421
Query: 668 SSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+DG P PH L+M+ATPIPRTL+LA +G++ ++ + ++P R PI T
Sbjct: 422 --------NDGLPGK----IPHFLSMTATPIPRTLSLAFFGNLDISVLDEMPKNRKPIAT 469
Query: 728 YIIEGNEKGYENVY 741
II+ ++ E VY
Sbjct: 470 KIIKETQR--EQVY 481
>gi|153810839|ref|ZP_01963507.1| hypothetical protein RUMOBE_01223 [Ruminococcus obeum ATCC 29174]
gi|149833235|gb|EDM88317.1| putative ATP-dependent DNA helicase RecG [Ruminococcus obeum ATCC
29174]
Length = 517
Score = 231 bits (590), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 169/524 (32%), Positives = 264/524 (50%), Gaps = 84/524 (16%)
Query: 209 KCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIIS 268
+ + V +++L+ +L G Y LLH++PR Y D A +D+ D + E
Sbjct: 6 RTLKGVGDKTEKLFFKL---GIYDTDDLLHYYPRNY-DAFEAPVDIAD------LEEGTV 55
Query: 269 SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIP 328
A CS ++ G +I +N SG+ I+ ++ P
Sbjct: 56 KAVSAAVCSGVYVTSAKGRQIITAS-------INDSSGKLSVIWFNM------------P 96
Query: 329 FLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDL--SLRAKGRPYPIY 386
+L+++ + +FV + R +R +H EM + ++ SL+ P+Y
Sbjct: 97 YLRTVLKRD--SQFVF---RGRIVRKQSHLEMEHPEVFTPAAYGEILHSLQ------PVY 145
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL 446
GGL+ + I + L+ LP + +P+EI + + L + A IH P +++E L
Sbjct: 146 GLTGGLSNKTVTKMIHQLLKNLPMYSEFLPEEIRERYQLADINYALRTIHFPGNMEELLL 205
Query: 447 ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLR 506
+RKRL+FDEF L QML+ + ++K W+ T++++
Sbjct: 206 SRKRLVFDEFLLFILS--VQMLKEKSEETPNYFPINK------------TWT--TEQIIE 249
Query: 507 ALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFM 566
LPYSLT +QL+ EI D+ M+RL+QGDVG GKT++AFLA + +GYQAA M
Sbjct: 250 NLPYSLTGAQLNTWHEIERDMSGQALMSRLVQGDVGSGKTIIAFLAMILACENGYQAALM 309
Query: 567 VPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGT 626
PTE+LA QHY+ L+L EE + LLTGS ++ R I + + +G+ ++IGT
Sbjct: 310 APTEVLARQHYDGFLRL---QEEQGLNFHVVLLTGSNTAREKREIYQHIASGEAQIIIGT 366
Query: 627 HSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHM 686
H+LI EKVE+ L L + DEQ RFGV QR ++ G+P
Sbjct: 367 HALIQEKVEYHDLALVVTDEQHRFGVKQREALTTR----------------GNP------ 404
Query: 687 APHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
P++L MSATPIPRTLA+ LYGD+ ++ I +LP R+PIK ++
Sbjct: 405 -PNILVMSATPIPRTLAIILYGDLDISIIDELPAKRLPIKNCVV 447
>gi|302871974|ref|YP_003840610.1| ATP-dependent DNA helicase RecG [Caldicellulosiruptor obsidiansis
OB47]
gi|302574833|gb|ADL42624.1| ATP-dependent DNA helicase RecG [Caldicellulosiruptor obsidiansis
OB47]
Length = 679
Score = 231 bits (590), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 154/398 (38%), Positives = 211/398 (53%), Gaps = 58/398 (14%)
Query: 338 KVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDE---DDLSLRAKGRPYPIYPSKGGLNA 394
K GE C SGK+ E + + I+V E D L GR P+Y S GL+
Sbjct: 106 KEGEIFCFSGKI---------ERKGFYIEVKNPEFEKYDQHLLHTGRIVPVYNSTEGLSQ 156
Query: 395 SLLRDTIARALQALP-ANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIF 453
++R+ + LQ + A D +P I Q++ L + A IH P++ +LARKRL+F
Sbjct: 157 KVIRNIVNNLLQQVDGALIDIIPPYIRQKYNLSEINFAIKNIHFPENKLSLELARKRLVF 216
Query: 454 DEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLT 513
+EF YL L + E + + EGL +E S K+ + LP+ LT
Sbjct: 217 EEF-YLLQLSLLLLKENIE---KNEGL------------KIENAQSSLKEFEKLLPFELT 260
Query: 514 SSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLA 573
+Q ++EI DL+ MNRL+QGDVGCGKTVVA + I +GYQ A M PTE+LA
Sbjct: 261 EAQKRVLAEIAQDLESTKQMNRLIQGDVGCGKTVVALASAYATIKAGYQVALMAPTEVLA 320
Query: 574 TQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEK 633
QHY K N K + LL GSTP K+ +I K+++ G +VIGTH+LI ++
Sbjct: 321 LQHYNECKKYFGN------KFNVRLLIGSTPKKEKEIILKEIEHGLCKMVIGTHALIQDE 374
Query: 634 VEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAM 693
V+F L LAI DEQ RFGV+QR K GS +P++L M
Sbjct: 375 VKFKNLGLAITDEQHRFGVIQRVELTKK----------------GS-------SPNILVM 411
Query: 694 SATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
+ATPIPRTL+L LYGD+ ++ I LPPGR I TY ++
Sbjct: 412 TATPIPRTLSLVLYGDLDISIIDQLPPGRKKILTYAVD 449
>gi|383753974|ref|YP_005432877.1| putative ATP-dependent DNA helicase RecG [Selenomonas ruminantium
subsp. lactilytica TAM6421]
gi|381366026|dbj|BAL82854.1| putative ATP-dependent DNA helicase RecG [Selenomonas ruminantium
subsp. lactilytica TAM6421]
Length = 688
Score = 231 bits (590), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 164/531 (30%), Positives = 246/531 (46%), Gaps = 86/531 (16%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L I V G+ + +L+ G T+ LL +FPRTY D
Sbjct: 3 LTDSIQYVKGVGPKKTAELKRLGLRTVYDLLTYFPRTYEDQ------------------- 43
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNID--SGQKKKIYLHLKKFFRGTRF 324
S L I + +T T +G ++N+ G ++ + + + GT
Sbjct: 44 ------------SVLTKISELQAGETVTVAGT-IMNVSERQGGRRGMTILMALIGDGTGM 90
Query: 325 TSIPFL--KSIEGKHKVGEFVCVSGKVR-AMRSNNHYEMRE-YNIDVLKDEDDLSLRAKG 380
+ + K ++ K KVG+ V V+GK A + M + ++ ++L +E + R
Sbjct: 91 LQVTWFNQKYLKNKLKVGKKVFVTGKAAYAYGGRGQFAMSQLHSFEILDEEAEPESRTG- 149
Query: 381 RPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKH 440
P+YP+ LN R IA A D +P + + +GLL A +H P
Sbjct: 150 -IVPVYPATEKLNQKFFRKVIAGLFAEELAIHDLIPPRVMKAYGLLTRQQALRDMHFPAD 208
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGW--S 498
ARK L F+E + +Q G LL R+ R N+ + S
Sbjct: 209 FSVLQAARKHLAFEELYLIQCG-----------------LLLLKRQARENSKGIRHLLSS 251
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
L K+ ALP+ LT Q EI D++ P+PM RL+QGDVG GKTV+A LA ++ +
Sbjct: 252 ELVAKVQAALPFRLTDDQARTWQEIQRDMESPLPMRRLVQGDVGSGKTVIAMLALVKTVE 311
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+GYQ A M PTE+LA+QHYE L L+ + +I L+G K+ + +
Sbjct: 312 NGYQGALMAPTEILASQHYEGFLWQLEPL-----GIRIGFLSGRLTKKKREEMYARIAAQ 366
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
++ +VIGTH+LI E V+F+ L L + DEQ RFG+ QR K
Sbjct: 367 EVDIVIGTHALIQEGVDFAKLGLVVTDEQHRFGIAQRAELEKK----------------- 409
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYI 729
H+ P VL M+ATPIPRT+ L +YGD+ ++ I LPPGR PI+T++
Sbjct: 410 -----GHLMPDVLVMTATPIPRTMTLTVYGDLDVSLIQQLPPGRQPIRTFV 455
>gi|291528911|emb|CBK94497.1| RecG-like helicase [Eubacterium rectale M104/1]
Length = 688
Score = 231 bits (590), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 171/525 (32%), Positives = 248/525 (47%), Gaps = 84/525 (16%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
I+ V G+ ++ G YT+ +L HFPR Y F I +I
Sbjct: 7 ITAVKGIGEKTQKAFAKMGVYTVGDILLHFPRDYVK-------------FPEITDIDELN 53
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFL 330
+ +++ VI + + T+ ++ D G H+ + + +P+L
Sbjct: 54 NVNVSSTYAIHAVIKKAPV--VKNTARMQITLQDIGSPG----HMIQLV----WYRMPYL 103
Query: 331 KS--IEGKHKV--GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
K+ ++G+H + G G+ M YE+++Y + ++D +L+ P+Y
Sbjct: 104 KAQLVQGRHLIFYGHIKPKGGRY-VMEQPVVYEVQKY--EAIRD----TLQ------PVY 150
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMG-IHQPKHIDEAD 445
G+ +L+ TI L D +PK+I +G C ++ M IH P D
Sbjct: 151 SVTTGVTNNLIVKTIKETLSHDTLLSDYLPKDIRSRYGF-CEYNYAMKQIHFPDDFDALV 209
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLL 505
AR+RL+FDEFF +G YQ K+ DK + A+++G L+
Sbjct: 210 EARRRLVFDEFFLFIMGMRYQ---------NKKQQKDKNEFEFTDDAFIDG-------LI 253
Query: 506 RALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAF 565
LPY LT +Q I EI D+K P M RL+QGDVG GKT+VAFL GYQ+A
Sbjct: 254 DKLPYELTGAQKKTIDEIKQDIKSPYVMQRLIQGDVGSGKTIVAFLLMAWASKCGYQSAI 313
Query: 566 MVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIG 625
M PTE+LA QHYE L+ D + LLTGS KQ R L+ L+IG
Sbjct: 314 MAPTEVLANQHYETFCSLVSQFGLDS---PVVLLTGSMTAKQKREAYARLENEKNALIIG 370
Query: 626 THSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQH 685
TH+LI EK +FS L L I DEQ RFGV QR F+ D+
Sbjct: 371 THALIQEKADFSNLSLVITDEQHRFGVKQRESFS-----------------------DKG 407
Query: 686 MAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
PH+L MSATPIPRTLA+ +YGDM ++ I ++P R+PIK ++
Sbjct: 408 RKPHILVMSATPIPRTLAIIIYGDMDISVINEVPAKRLPIKNCVV 452
>gi|219854623|ref|YP_002471745.1| hypothetical protein CKR_1280 [Clostridium kluyveri NBRC 12016]
gi|219568347|dbj|BAH06331.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 682
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 169/536 (31%), Positives = 263/536 (49%), Gaps = 90/536 (16%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
I + G+ L +C + + LL +FPR Y + N DL+
Sbjct: 10 IKSIKGVGAVTAGTLNSCCIFNILDLLLYFPRDYEIISNCS-DLN--------------- 53
Query: 271 GMKAGCSFSFLEVIVGCEIA----DTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
K G +VI+ C + D T S + + ++ + F+G F
Sbjct: 54 --KVGTG----KVIMDCRVKSIGKDIRTKSKKILSTV-------VFENESGTFQGKWFNQ 100
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
P++K+ K K+ + + GK+ R N + N ++ +E ++ + + + PIY
Sbjct: 101 -PYMKN---KFKINKVYRIMGKIE--RFNGSISI--MNPTLVSNE--VNSKKEDKIIPIY 150
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL 446
P K G+ ++L I++ + + + +P I +++ L A IH+P I+E +
Sbjct: 151 PLKSGITNNILIKLISKVIHEVDIE-ENLPTWIIKKYKFCSLNKAIKAIHKPGSIEELEE 209
Query: 447 ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLR 506
A++RL F E F L L ML+ ++ K+G+ K +S K+L +
Sbjct: 210 AKRRLKFQELFSYSLKIL--MLKNYHSR-NKKGIAFKI-------------ASELKELKK 253
Query: 507 ALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFM 566
+PY LT SQ I EI+ D K PMNRLLQGDVG GKT+VA +A V+ +GYQA FM
Sbjct: 254 RIPYELTKSQNKVIREILLDEKMESPMNRLLQGDVGSGKTIVAIIAIFNVVKNGYQAVFM 313
Query: 567 VPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGT 626
PTE+LA QHYE K L + + I LL GS + +++++DL+ G I ++IGT
Sbjct: 314 APTEILAKQHYEECKKFLQDTGVN-----IQLLCGSVTERNKKILKEDLKYGKIDIIIGT 368
Query: 627 HSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHM 686
H+LI + VEF + + + DEQ RFGV QR + +K Y
Sbjct: 369 HALIEDDVEFKNIGMVVTDEQHRFGVAQRSKLINKGKYVD-------------------- 408
Query: 687 APHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYK 742
L M+ATPIPRTL+L L+GD++++ I +LPPGR I TY + +K + VYK
Sbjct: 409 ---TLVMTATPIPRTLSLCLHGDLNISIIDELPPGRKKIHTYYTD--KKSKDRVYK 459
>gi|404370899|ref|ZP_10976214.1| ATP-dependent DNA helicase RecG [Clostridium sp. 7_2_43FAA]
gi|226912979|gb|EEH98180.1| ATP-dependent DNA helicase RecG [Clostridium sp. 7_2_43FAA]
Length = 676
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 177/529 (33%), Positives = 254/529 (48%), Gaps = 91/529 (17%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTY----ADLQNAQIDLDDGQYFIFIGEI 266
IS + G+ +L +L CG +T+ LL +FPR Y D+ +ID ++ Q I
Sbjct: 7 ISSLKGVGPKLTEKLNKCGIFTIYDLLLYFPRDYEFIKGDVAFNEIDGEEKQ-------I 59
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
++ R ++G + D +T +G + I K I + K+F
Sbjct: 60 LTCR-------------VIGYD-RDVKTKTGKIISAIKFDYKGHIVI--AKWFNQ----- 98
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
+ I+ +++ EF + GK + R N E+ I+ + D K P Y
Sbjct: 99 ----RYIKNSYRLNEFYDLVGKFK--RVGNLLEV----INPMVGCRDAK---KSEIIPKY 145
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL 446
P KG L+ ++ I + L + D +PKEI ++ ++ L A IH PK + D
Sbjct: 146 PLKGDLSDRIITKLINQILDEVIIT-DNLPKEILDKYKMIGLDKAIREIHFPKGKGDLDQ 204
Query: 447 ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLR 506
A RL F E F Y M L K R N W L
Sbjct: 205 AIIRLKFQELF------TYSMKLLLLKN-----------KLRSNDGISFYWHEELTTLKE 247
Query: 507 ALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFM 566
+LP++LT +Q + EI+ D K MNRL+QGDVG GKT+VA +A VI +G+QA+ M
Sbjct: 248 SLPFNLTDAQTKVVREILRDQKSKYSMNRLVQGDVGSGKTIVAIIAMFNVIKNGFQASLM 307
Query: 567 VPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGT 626
VPTE+LA QHYE LK+L N ++ LLTGST +K+ R I++ + TG+ +VIGT
Sbjct: 308 VPTEILANQHYEETLKILKNF-----NVEVELLTGSTSLKEKRRIKERISTGEPLIVIGT 362
Query: 627 HSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHM 686
H+LI E V+F+ L L I DEQ RFGV QR + +K
Sbjct: 363 HALIQEDVDFTNLGLVITDEQHRFGVEQRSKLINK-----------------------GR 399
Query: 687 APHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
P VL M+ATPIPRTLAL +Y D+ ++ I LPPGR I T N++
Sbjct: 400 RPDVLVMTATPIPRTLALYMYSDLDVSIIDKLPPGRKKIDTRFYSENDR 448
>gi|291524768|emb|CBK90355.1| ATP-dependent DNA helicase RecG [Eubacterium rectale DSM 17629]
Length = 688
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 169/525 (32%), Positives = 249/525 (47%), Gaps = 84/525 (16%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
I+ V G+ ++ G YT+ +L HFPR Y F I +I
Sbjct: 7 ITAVKGIGEKTQKAFAKMGVYTVGDILLHFPRDYVK-------------FPEITDIDELN 53
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFL 330
+ +++ VI + + T+ ++ D G H+ + + +P+L
Sbjct: 54 NVNVSSTYAIHAVIKKAPV--VKNTARMQITLQDIGSPG----HMIQLV----WYRMPYL 103
Query: 331 KS--IEGKHKV--GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
K+ ++G+H + G G+ M YE+++Y + ++D +L+ P+Y
Sbjct: 104 KAQLVQGRHLIFYGHIKPKGGRY-VMEQPVVYEVQKY--EAIRD----TLQ------PVY 150
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMG-IHQPKHIDEAD 445
G+ +L+ TI L D +PK+I +G C ++ M IH P D
Sbjct: 151 SVTSGVTNNLIVKTIKETLSHDTLLSDYLPKDIRHRYGF-CEYNYAMKQIHFPDDFDALV 209
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLL 505
AR+RL+FDEFF +G YQ K+ DK + A+++ +++
Sbjct: 210 EARRRLVFDEFFLFIMGMRYQ---------NKKQQKDKNEFEFTDDAFID-------RMI 253
Query: 506 RALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAF 565
LPY LT +Q I EI D+K P M RL+QGDVG GKT+VAFL GYQ+A
Sbjct: 254 EKLPYELTGAQKKTIDEIKQDIKSPYVMQRLIQGDVGSGKTIVAFLLMAWASKCGYQSAI 313
Query: 566 MVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIG 625
M PTE+LA QHYE L+ D + LLTGS KQ R + L+ L+IG
Sbjct: 314 MAPTEVLANQHYETFCSLVSQFGLDS---PVVLLTGSMTAKQKREAYERLENEKNALIIG 370
Query: 626 THSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQH 685
TH+LI EK +FS L L I DEQ RFGV QR F+ D+
Sbjct: 371 THALIQEKADFSNLSLVITDEQHRFGVKQRESFS-----------------------DKG 407
Query: 686 MAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
PH+L MSATPIPRTLA+ +YGDM ++ I ++P R+PIK ++
Sbjct: 408 RKPHILVMSATPIPRTLAIIIYGDMDISVINEVPAKRLPIKNCVV 452
>gi|206901942|ref|YP_002250862.1| ATP-dependent DNA helicase RecG [Dictyoglomus thermophilum H-6-12]
gi|206741045|gb|ACI20103.1| ATP-dependent DNA helicase RecG [Dictyoglomus thermophilum H-6-12]
Length = 778
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 151/398 (37%), Positives = 209/398 (52%), Gaps = 50/398 (12%)
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRD 399
G V +SG+V+ + + +E EY + DE+D GR PIY GL +LR
Sbjct: 198 GTDVLISGEVKRVLKHIEFENPEYEV---LDEEDKEFLNVGRIVPIYSLTSGLTQKVLRK 254
Query: 400 TIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFY 458
I AL DP+PK + +++ L+ + H P A KR+ F+E F+
Sbjct: 255 IIYDALTDYSIFLEDPLPKYLREKYNLMDKPVSIWEKHFPTSFLTMASASKRIAFEELFF 314
Query: 459 LQLGRLYQMLEGLGTQFEKEGLLDKYRK-PRLNAAYMEGWSSLTKKLLRALPYSLTSSQL 517
LQL L +K ++ +L+A + S L ++ L +LP+ LT +Q
Sbjct: 315 LQLN-----------------LAEKRKEIEKLSAPVFKTDSELVERFLNSLPFKLTKAQE 357
Query: 518 SAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHY 577
EI DL PM+RLLQGDVG GKTV+A LA + +GYQ AFMVPTE+LA QHY
Sbjct: 358 KVWEEIKKDLSSGRPMHRLLQGDVGSGKTVIAALAAILAYDNGYQTAFMVPTEILAEQHY 417
Query: 578 EHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFS 637
L K+ + + +IALLT STP K+ I DL G + +VIGTH+LI E+V F
Sbjct: 418 NRLKKIFEPL-----GIRIALLTSSTPKKEKTYIYLDLAEGKLPIVIGTHALIQEEVTFK 472
Query: 638 ALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATP 697
L L I+DEQ RFGV+QR + K PH+L M+ATP
Sbjct: 473 KLGLVIIDEQHRFGVIQRAKLWKK-----------------------GENPHLLVMTATP 509
Query: 698 IPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
IPR+LAL LYG++ ++ I +LPPGR P+ TY+ E+
Sbjct: 510 IPRSLALVLYGELDISIIDELPPGRKPVITYLFSKRER 547
>gi|320160931|ref|YP_004174155.1| ATP-dependent DNA helicase RecG [Anaerolinea thermophila UNI-1]
gi|319994784|dbj|BAJ63555.1| ATP-dependent DNA helicase RecG [Anaerolinea thermophila UNI-1]
Length = 816
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 182/564 (32%), Positives = 258/564 (45%), Gaps = 94/564 (16%)
Query: 192 SEVGSLPSEASIEP------LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYA 245
SE S+ ++A +E L + V G+ K+ LE G TL+ LL+ FPR Y
Sbjct: 106 SERASIATDAPVETEQHILRTLQTPLHRVSGVGKKTAEALEKLGINTLQDLLYFFPRRYD 165
Query: 246 DLQN----AQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVV 301
D ++ D + + + I+SR ++ G +E I+ T G +
Sbjct: 166 DYSRLKPINKLKYGDEVTVLGVVQAIASRQVRDG-KLQLIEAII---------TDGTGTL 215
Query: 302 NIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMR 361
+ K ++ +F +GT+ V VSGK+ + Y +
Sbjct: 216 RLSWFNK---LWYVNRFPKGTQ-------------------VAVSGKL------DMYLGK 247
Query: 362 EYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARA-LQALPANFDPVPKEIT 420
D +E D R P+YP LN LR + R +Q P D +P +
Sbjct: 248 LIMKDPEIEEIDREQLHTSRIVPVYPLTADLNQKSLRRLMYRTIMQWAPKVSDFLPASVR 307
Query: 421 QEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGL 480
LL L A H P D D AR RL FDE F LQLG L Q
Sbjct: 308 SSLKLLELGVALSQAHFPDSQDVLDQARWRLAFDEIFLLQLGVLRQ-------------- 353
Query: 481 LDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGD 540
K+ L A + + ++ L LPY LT++Q A+ EI DL PM+RLLQGD
Sbjct: 354 --KHSWKSLQARVFDVPDTWLEQKLAQLPYELTNAQKRAVQEIRADLVSGKPMDRLLQGD 411
Query: 541 VGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDK----HKPKI 596
VG GKT+VA LA V G Q A M PT +LA QHY +L ++L +E +I
Sbjct: 412 VGSGKTIVAALAIGMVTYHGAQVAVMAPTSILAEQHYRNLSRVLTQSDESTLPILQPEQI 471
Query: 597 ALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRG 656
LLT + I DLQ G + L+IGTH+LI + V+F L+L ++DEQ RFGV QR
Sbjct: 472 RLLTSDVRGAEREKILNDLQHGSVKLLIGTHALIEDPVQFQDLQLVVIDEQHRFGVAQRA 531
Query: 657 RFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQIT 716
K G+ PH+L M+ATPIPR+LAL +YGD+ LT +
Sbjct: 532 ALRQK----------------GN-------NPHLLVMTATPIPRSLALTIYGDLDLTVMD 568
Query: 717 DLPPGRIPIKTYIIE--GNEKGYE 738
++PPGR P++T+++ E+ Y+
Sbjct: 569 EMPPGRQPVETHVLHPLERERAYQ 592
>gi|312622538|ref|YP_004024151.1| ATP-dependent DNA helicase recg [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203005|gb|ADQ46332.1| ATP-dependent DNA helicase RecG [Caldicellulosiruptor
kronotskyensis 2002]
Length = 679
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 177/538 (32%), Positives = 255/538 (47%), Gaps = 103/538 (19%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFI 263
+L+K I + G+ + + G LL H PR Y D + +L DG+ F+
Sbjct: 3 VLEKDIRFLKGVGENREKLFKKLGIKKAEDLLWHIPRKYLDYSRLKKIRELCDGEIESFV 62
Query: 264 GEI------ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK 317
++ I +R +K I+ + D+ N D
Sbjct: 63 AKVAGKPLEIETRSVK----------IIKIPVEDSTGVVTTVWFNQD------------- 99
Query: 318 FFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDE---DDL 374
++K++ K GE C SGK+ E + + I+V E D
Sbjct: 100 -----------YIKNV---LKEGEVFCFSGKI---------ERKGFYIEVKNPEFEKYDQ 136
Query: 375 SLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYM 433
L GR P+Y S GL+ ++R+ + LQ + D +P I Q++ L + A
Sbjct: 137 HLIHTGRIVPVYNSTEGLSQKVIRNIVNNLLQQVDGMLIDIIPPYIRQKYNLSEINFAIK 196
Query: 434 GIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAY 493
IH P++ +LARKRL+F+EF YL L + E + + EG+
Sbjct: 197 NIHFPENKLSLELARKRLVFEEF-YLLQLSLLLLKENIE---KNEGI------------K 240
Query: 494 MEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLAC 553
+E S K+ + LP+ LT +Q ++EI DL+ MNRL+QGDVGCGKTVVA +
Sbjct: 241 IENVQSSLKEFEKLLPFELTDAQKRVLAEIAQDLESTKQMNRLIQGDVGCGKTVVALASA 300
Query: 554 MEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRK 613
I +GYQ A M PTE+LA QHY K DN K + LL GSTP K+ +I K
Sbjct: 301 YATIKAGYQVALMAPTEVLALQHYNECKKYFDN------KFNVRLLIGSTPKKEKEIILK 354
Query: 614 DLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAM 673
+L+ G +VIGTH+LI + V+F L LAI DEQ RFGV+QR K
Sbjct: 355 ELEHGLCKMVIGTHALIQDDVKFKNLGLAITDEQHRFGVIQRVELTKK------------ 402
Query: 674 VNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
GS +P++L M+ATPIPRTL+L L+GD+ ++ I LPPGR I TY ++
Sbjct: 403 ----GS-------SPNILVMTATPIPRTLSLVLHGDLDISIIDQLPPGRKKILTYAVD 449
>gi|344204540|ref|YP_004789683.1| ATP-dependent DNA helicase RecG [Muricauda ruestringensis DSM
13258]
gi|343956462|gb|AEM72261.1| ATP-dependent DNA helicase RecG [Muricauda ruestringensis DSM
13258]
Length = 701
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 173/514 (33%), Positives = 252/514 (49%), Gaps = 96/514 (18%)
Query: 228 CGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGC 287
G T R LLH FP Y LD Y+ ++ +G + IV
Sbjct: 28 LGIETFRDLLHLFPNRY---------LDRTSYYKI------NQLQPSGADVQVMGKIV-- 70
Query: 288 EIADTETTSGDEVVNI---DSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVC 344
+ E G +V ++GQ ++ FRG ++ I+ K+ E
Sbjct: 71 HLKTVEQKRGKRLVATFVDETGQMDLVW------FRGHKW--------IKENLKLNEPYV 116
Query: 345 VSGKVRAMRSNNHYEMREYNIDVL-KDEDDLSLRAKGRPYPIYPSKGGL-NASLLRDTIA 402
V GKV R + + M +++ L K + L + + PIYPS L N + I+
Sbjct: 117 VFGKVN--RYGSTFSMPHPDMEPLQKHQQGLKMAMQ----PIYPSTEKLSNKGITNRVIS 170
Query: 403 RALQAL--------PANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFD 454
+ +Q L P + P I +E L+ A IH PK+ + A+ RL F+
Sbjct: 171 KMIQQLFLECKGKFPESLSP---SILEELKLISKSSALFNIHFPKNQELLAKAQFRLKFE 227
Query: 455 EFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG-WSSLTKKLLRALPYSLT 513
E F++QL + Q L+ RK ++ E T+ LP+ LT
Sbjct: 228 ELFFVQLRLISQNLK---------------RKQKIKGMPFEAVGEKFTEFFENHLPFELT 272
Query: 514 SSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLA 573
++Q I EI DL MNRLLQGDVG GKT+VA + + I +G+Q M PTE+LA
Sbjct: 273 NAQKRVIKEIRNDLGSNAQMNRLLQGDVGSGKTIVALMCMLLAIDNGFQTCLMAPTEILA 332
Query: 574 TQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEK 633
TQHY L +LL+NM+ KIALLTGST + ++ L+ G++ +++GTH+++ +K
Sbjct: 333 TQHYNGLKELLENMD-----VKIALLTGSTKKSERTLLHNQLENGNLNILVGTHAVLEDK 387
Query: 634 VEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAM 693
V+F L LAIVDEQ RFGV QR SKL++ + + PH+L M
Sbjct: 388 VQFKNLGLAIVDEQHRFGVAQR----SKLWHKNQT------------------PPHILVM 425
Query: 694 SATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ATPIPRTLA++LYGD+ ++ I +LPPGR PIKT
Sbjct: 426 TATPIPRTLAMSLYGDLDISVIDELPPGRKPIKT 459
>gi|333395984|ref|ZP_08477801.1| ATP-dependent DNA helicase RecG [Lactobacillus coryniformis subsp.
coryniformis KCTC 3167]
Length = 681
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 178/532 (33%), Positives = 254/532 (47%), Gaps = 88/532 (16%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGE 265
LLD ++ +PG+ + L T+ LLH+FP Y DL+ +D E
Sbjct: 6 LLDP-VAVLPGVGPKKVQALHELKINTINDLLHYFPFRYEDLKVKSLD-----------E 53
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFT 325
+I + L+ +V + G +N+ L + + F
Sbjct: 54 VIDQEKVT-------LKGVVVGPPVVSRFGRGKNRLNV--------RLLIDQAVIMVTFF 98
Query: 326 SIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPI 385
+ P+LK K + G V V GK A R + + VL ++D S I
Sbjct: 99 NQPWLKD---KFETGAEVAVYGKWDAKRKSM------TGMKVLAIKNDTSPEFAS----I 145
Query: 386 YPSKGGLNASLLRDTIARALQA---LPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHID 442
Y + + + L I A A L N +P+ + ++ L+ G+H PK
Sbjct: 146 YSASKSIRQTTLVKLIRTAYDAYADLIVNI--LPQALIDKYRLVTERQVIHGMHFPKTQT 203
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
EA+ AR+ IF+EFF Q+ Q+L+ Q ++GL Y +L A
Sbjct: 204 EANAARRTAIFEEFFLFQMA--IQLLKK-REQAPEQGLALHYDNQKLRA----------- 249
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
++ LP+ LT +Q ++EI DLK P MNRLLQGDVG GKT+VA L + +GYQ
Sbjct: 250 -FIQTLPFELTKAQKRVVNEICRDLKSPRHMNRLLQGDVGSGKTIVAALVMYAAVTAGYQ 308
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
AA M PTE+LA QHY++L +L + + ++ALLTGS K + I DL G I L
Sbjct: 309 AALMAPTEILAEQHYKNLQRLFADFD-----VQVALLTGSIKGKARQAILSDLAAGKIDL 363
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
+IGTH+LI + V+F+ L LAI DEQ RFGV QR K Y
Sbjct: 364 IIGTHALIQDGVDFAKLGLAITDEQHRFGVNQRRVLREKGYR------------------ 405
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
P +LAM+ATPIPRTLA+ +G+M ++ I +LP GRIPIKT I GN+
Sbjct: 406 -----PDILAMTATPIPRTLAITAFGEMDVSTIDELPAGRIPIKTSWIRGNQ 452
>gi|407003348|gb|EKE19935.1| hypothetical protein ACD_8C00082G0004 [uncultured bacterium]
Length = 712
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 183/566 (32%), Positives = 268/566 (47%), Gaps = 110/566 (19%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADL-QNAQID-LDDGQYFIFIG 264
+ + I +P S++ L G T+ L HFP Y D + +I+ L Q +G
Sbjct: 4 ITQKIETLPRFSEKYVSALNKLGIKTVEDFLMHFPFRYEDYSERTEIENLAKDQTVTIMG 63
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
EII S+ ++ ++ +I C IAD ++G + ++ + +
Sbjct: 64 EIIQSKLVR---TWKKKMMITECHIAD------------ETGSVRAVWFN-------QPY 101
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRA---KGR 381
S L VG+ V +SGKV ++ ++ + +LS R GR
Sbjct: 102 VSDSLL--------VGKGVRLSGKVSEDQNGFYFSNPAW---------ELSSREPTNTGR 144
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANF---DPVPKEITQEFGLLCLFDAYMGIHQP 438
PIYP GL + +R + +A NF DP+P EI E L + A IH P
Sbjct: 145 LVPIYPETEGLTSKWIRWQLQNIFKA---NFEIQDPIPAEILSELHLPEIKTALKYIHFP 201
Query: 439 KHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWS 498
K E+ LA+KR F +QL L + +EKE K +K + +E +
Sbjct: 202 KTEAESLLAQKRFAFQIMLTMQLTSL-----KIKKSWEKE----KAQKIIFDKIEIEKFK 252
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
S ALP+SLT +Q AI EI+ DL++ +PMNRLL GDVG GKT+VA A + +
Sbjct: 253 S-------ALPFSLTGAQQKAIGEILSDLEKTMPMNRLLNGDVGSGKTIVAATASLATVL 305
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGS---------------- 602
SG+Q A M PTE+LA QH+E L KL N I LLT S
Sbjct: 306 SGFQTAIMAPTEVLALQHFESLTKLFAN-----QNINIGLLTNSYQIIQSESRKSKVESP 360
Query: 603 -------TPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQR 655
+ +K + K+L G I ++IGTH+LI EK++F L L I+DEQ RFGV QR
Sbjct: 361 KNEEKPLSKIKNKENLLKNLIEGKIDILIGTHALIQEKIKFKNLTLIIIDEQHRFGVNQR 420
Query: 656 GRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQI 715
K+ +DG P+ P +L M+ATPIPRTL LA +G++ L+ +
Sbjct: 421 AYLQQKITEI----------NDGLPEK----IPRLLTMTATPIPRTLTLAFFGNLDLSIL 466
Query: 716 TDLPPGRIPIKTYIIEGNEKGYENVY 741
++P R I+T II +++ E+VY
Sbjct: 467 DEMPKNRKVIETKIIPNSQR--EDVY 490
>gi|420145063|ref|ZP_14652539.1| ATP-dependent DNA helicase RecG [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
gi|398403298|gb|EJN56553.1| ATP-dependent DNA helicase RecG [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
Length = 681
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 178/532 (33%), Positives = 254/532 (47%), Gaps = 88/532 (16%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGE 265
LLD ++ +PG+ + L T+ LLH+FP Y DL+ +D E
Sbjct: 6 LLDP-VAVLPGVGPKKVQALHELKINTINDLLHYFPFRYEDLKVKSLD-----------E 53
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFT 325
+I + L+ +V + G +N+ L + + F
Sbjct: 54 VIDQEKVT-------LKGVVVGPPVVSHFGRGKNRLNV--------RLLIDQAVIMVTFF 98
Query: 326 SIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPI 385
+ P+LK K + G V V GK A R + + VL ++D S I
Sbjct: 99 NQPWLKD---KFETGAEVAVYGKWDAKRKSM------TGMKVLAIKNDTSPEFAS----I 145
Query: 386 YPSKGGLNASLLRDTIARALQA---LPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHID 442
Y + + + L I A A L N +P+ + ++ L+ G+H PK
Sbjct: 146 YSASKSIRQTTLVKLIRTAYDAYADLIVNI--LPQALIDKYRLVTERQVIHGMHFPKTQT 203
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
EA+ AR+ IF+EFF Q+ Q+L+ Q ++GL Y +L A
Sbjct: 204 EANAARRTAIFEEFFLFQMA--IQLLKK-REQAPEQGLALHYDNQKLRA----------- 249
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
++ LP+ LT +Q ++EI DLK P MNRLLQGDVG GKT+VA L + +GYQ
Sbjct: 250 -FIQTLPFELTKAQKRVVNEICRDLKSPRHMNRLLQGDVGSGKTIVAALVMYAAVTAGYQ 308
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
AA M PTE+LA QHY++L +L + + ++ALLTGS K + I DL G I L
Sbjct: 309 AALMAPTEILAEQHYKNLQRLFADFD-----VQVALLTGSIKGKARQAILSDLAAGKIDL 363
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
+IGTH+LI + V+F+ L LAI DEQ RFGV QR K Y
Sbjct: 364 IIGTHALIQDGVDFAKLGLAITDEQHRFGVNQRRVLREKGYR------------------ 405
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
P +LAM+ATPIPRTLA+ +G+M ++ I +LP GRIPIKT I GN+
Sbjct: 406 -----PDILAMTATPIPRTLAITAFGEMDVSTIDELPAGRIPIKTSWIRGNQ 452
>gi|330837736|ref|YP_004412377.1| ATP-dependent DNA helicase RecG [Sphaerochaeta coccoides DSM 17374]
gi|329749639|gb|AEC02995.1| ATP-dependent DNA helicase RecG [Sphaerochaeta coccoides DSM 17374]
Length = 699
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 145/409 (35%), Positives = 222/409 (54%), Gaps = 57/409 (13%)
Query: 341 EFVCVSGKVRAMRSNNHYEMREYN---IDVLKDEDDLSLRAK-GRPYPIYPSKGGLNASL 396
E V V+G+ + + Y M E +V+ DD S A+ G PIYP G L+ +
Sbjct: 113 EKVLVTGRTFYVYAQAAYHMTELQSSQFEVIPMRDDGSPPAEFGAVLPIYPLSGSLSQRI 172
Query: 397 LRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEF 456
+R +A L A + D +P + + LL A HQP +++ AR+ L F E
Sbjct: 173 IRRDVAAVLAARSFD-DELPPSLMDAYALLPTDRAIRMWHQPSSLEDVKKARQTLAFTEL 231
Query: 457 FYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT---KKLLRALPYSLT 513
FYLQL + + R R +++ ++ +T K+ + LP+SLT
Sbjct: 232 FYLQL-------------------VTRRRAVRTDSSTLKSPGEITGSEKRFISLLPFSLT 272
Query: 514 SSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLA 573
+ Q + + EI DL PMNR+LQGDVG GKT+VA+++ + V+ G Q AFM PTELLA
Sbjct: 273 ADQETVLKEIRMDLDSSSPMNRMLQGDVGSGKTLVAWISALHVLSHGGQVAFMAPTELLA 332
Query: 574 TQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEK 633
QH E+ +LL ++A LTGS K+ ++I +L+ G+I ++IGTH+L +++
Sbjct: 333 RQHAENAARLL-----APAGVRLAFLTGSVKGKERKLILDNLKAGNIDVIIGTHALFSKE 387
Query: 634 VEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAM 693
VEF LR I+DEQ RFGV QR +A++ D+ P VL M
Sbjct: 388 VEFRRLRFVIIDEQHRFGVGQR---------------LALM--------DKAATPDVLLM 424
Query: 694 SATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYK 742
+ATPIPRTLAL ++GD++++ I +PPGR+P+ T+++ ++ E +YK
Sbjct: 425 TATPIPRTLALTVFGDLNVSTIHTMPPGRLPVITHLV--SDASRERMYK 471
>gi|352683786|ref|YP_004895770.1| ATP-dependent DNA helicase recG [Acidaminococcus intestini
RyC-MR95]
gi|350278440|gb|AEQ21630.1| ATP-dependent DNA helicase recG [Acidaminococcus intestini
RyC-MR95]
Length = 698
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 175/532 (32%), Positives = 255/532 (47%), Gaps = 90/532 (16%)
Query: 205 PLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRT-----YADLQNAQIDLDDGQY 259
P K +S + G+ + + E G T+ LL+HFPR Y+ ++ + DG
Sbjct: 12 PWWKKPVSSLKGIGPKKAIEFEGLGIVTIGDLLNHFPRQGCYLDYSHVKTIRELTLDGSM 71
Query: 260 FIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFF 319
+F G+I ++ + + V+V ++ T+ E+ F
Sbjct: 72 QLFRGQIARIIKRRSARNMRYASVVV------SDGTAFAEI-----------------FL 108
Query: 320 RGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAK 379
G + ++ +L++ G+ V V GKV R+ + + I +KDE A
Sbjct: 109 FGAQVYAVRYLEN-------GDDVLVIGKVGPGRTAK--AVTQAVISKVKDEHP---EAP 156
Query: 380 GRPYPIYPSKGGLNASLLRDTIARAL----QALPANFDPVPKEITQEFGLLCLFDAYMGI 435
G P Y G L +R + +AL LP + +P I ++ G L ++A I
Sbjct: 157 G-ILPTYALSGSLTQKNVRSAVRQALLLAKHHLP---ECLPDWIMRKKGFLSRYEALEAI 212
Query: 436 HQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYME 495
H P +++ + AR+R IF+E F++Q G L+ +K L K M
Sbjct: 213 HFPPSLEKMEEARRRFIFEELFFIQCGLLHHR-----ANIKKRSLGIK----------MG 257
Query: 496 GWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
L + +L L ++LT SQ A EI D++ P PMNRLLQGDVG GKT VA LA +
Sbjct: 258 HCGPLWQSVLDHLGFTLTESQKKAWQEINDDMESPEPMNRLLQGDVGSGKTAVAMLALAK 317
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
+GYQ M PTE+LA QHY+ + K+L+ + ALLTGS R + + L
Sbjct: 318 AAENGYQGCLMAPTEILAEQHYKEMQKVLEPL-----GIHTALLTGSLGQAARREVLEGL 372
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
G I V+GT++LI + V F +L LAI DEQ RFGV QR R + K YT
Sbjct: 373 ADGTIKAVVGTYALIQDAVTFHSLALAITDEQHRFGVEQRSRLSGKSSYT---------- 422
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
PHVL M+ATPIPRTLAL +YGD+ ++ + LPPGR PIKT
Sbjct: 423 ------------PHVLVMTATPIPRTLALTVYGDLDVSLMKGLPPGRKPIKT 462
>gi|227824767|ref|ZP_03989599.1| ATP-dependent DNA helicase recG [Acidaminococcus sp. D21]
gi|226905266|gb|EEH91184.1| ATP-dependent DNA helicase recG [Acidaminococcus sp. D21]
Length = 688
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 175/532 (32%), Positives = 255/532 (47%), Gaps = 90/532 (16%)
Query: 205 PLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRT-----YADLQNAQIDLDDGQY 259
P K +S + G+ + + E G T+ LL+HFPR Y+ ++ + DG
Sbjct: 2 PWWKKPVSSLKGIGPKKAIEFEGLGIVTIGDLLNHFPRQGCYLDYSHVKTIRELTLDGSM 61
Query: 260 FIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFF 319
+F G+I ++ + + V+V ++ T+ E+ F
Sbjct: 62 QLFRGQIARIIKRRSARNMRYASVVV------SDGTAFAEI-----------------FL 98
Query: 320 RGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAK 379
G + ++ +L++ G+ V V GKV R+ + + I +KDE A
Sbjct: 99 FGAQVYAVRYLEN-------GDDVLVIGKVGPGRTAK--AVTQAVISKVKDEHP---EAP 146
Query: 380 GRPYPIYPSKGGLNASLLRDTIARAL----QALPANFDPVPKEITQEFGLLCLFDAYMGI 435
G P Y G L +R + +AL LP + +P I ++ G L ++A I
Sbjct: 147 G-ILPTYALSGSLTQKNVRSAVRQALLLAKHHLP---ECLPDWIMRKKGFLSRYEALEAI 202
Query: 436 HQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYME 495
H P +++ + AR+R IF+E F++Q G L+ +K L K M
Sbjct: 203 HFPPSLEKMEEARRRFIFEELFFIQCGLLHHR-----ANIKKRSLGIK----------MG 247
Query: 496 GWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
L + +L L ++LT SQ A EI D++ P PMNRLLQGDVG GKT VA LA +
Sbjct: 248 HCGPLWQSVLDHLGFTLTESQKKAWQEINDDMESPEPMNRLLQGDVGSGKTAVAMLALAK 307
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
+GYQ M PTE+LA QHY+ + K+L+ + ALLTGS R + + L
Sbjct: 308 AAENGYQGCLMAPTEILAEQHYKEMQKVLEPL-----GIHTALLTGSLGQAARREVLEGL 362
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
G I V+GT++LI + V F +L LAI DEQ RFGV QR R + K YT
Sbjct: 363 ADGTIKAVVGTYALIQDAVTFHSLALAITDEQHRFGVEQRSRLSGKSSYT---------- 412
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
PHVL M+ATPIPRTLAL +YGD+ ++ + LPPGR PIKT
Sbjct: 413 ------------PHVLVMTATPIPRTLALTVYGDLDVSLMKGLPPGRKPIKT 452
>gi|300811693|ref|ZP_07092168.1| ATP-dependent DNA helicase RecG [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300497320|gb|EFK32367.1| ATP-dependent DNA helicase RecG [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 679
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 170/528 (32%), Positives = 264/528 (50%), Gaps = 99/528 (18%)
Query: 209 KCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGEII 267
+ ++ + G+ + L++ G Y++ LL +FP Y +L+N +D L+DGQ + G I+
Sbjct: 9 RPVTALKGVGAKTAEALQSLGIYSIYDLLFYFPYRYDELENLPLDQLEDGQKVMLKG-IV 67
Query: 268 SSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
++ + + V I +++ ++ F +
Sbjct: 68 ATNPYQNYFGYHKSRVSFKLRI-------DHDIIMVN-------------------FFNQ 101
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMRE-----YNIDVLKDEDDLSLRAKGRP 382
P+L + VG+ + V GK Y++R+ Y + K+ DD G
Sbjct: 102 PWLTK---QLSVGQEIAVYGK---------YDLRKQSLSAYKLLANKNSDD------GMA 143
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
PIY + L+ I A+ +++ + VP+++ + + L+ D + +H PK +
Sbjct: 144 -PIYSVNRQIKQKKLQTMIDLAIAESMDEMGNAVPEDLRKHYRLMADQDLVIAMHHPKDL 202
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWS-SL 500
EA AR+ +F EFF L+QM L + K ++ Y + +
Sbjct: 203 TEAKEARRSAVFREFF------LFQMQLALMSSQNKS-----------HSGYAKHYDLEE 245
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
KL ++LP++L+ Q I+EI D+ M RLLQGDVG GKTVVA A + +G
Sbjct: 246 IGKLTKSLPFALSPDQKKVINEIFADMFVDQQMQRLLQGDVGSGKTVVAVFAIYGAVTAG 305
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQAA MVPTE+LA QHY + +L++ ++ALLTGST + R I K+L G I
Sbjct: 306 YQAALMVPTEILANQHYHKISAMLEDF-----GVRVALLTGSTKTMERREIYKELADGSI 360
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+LI E+V F L L I+DEQ RFGVVQR +A++N
Sbjct: 361 NVVIGTHALIQEQVAFKKLGLVIIDEQHRFGVVQR---------------LALIN----- 400
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTY 728
K D+ P +LAM+ATPIPR+LAL +YGD +L++I LP GR PIK+Y
Sbjct: 401 KGDR---PDILAMTATPIPRSLALTVYGDTALSEIRHLPAGRKPIKSY 445
>gi|108763623|ref|YP_631603.1| ATP-dependent DNA helicase RecG [Myxococcus xanthus DK 1622]
gi|108467503|gb|ABF92688.1| ATP-dependent DNA helicase RecG [Myxococcus xanthus DK 1622]
Length = 669
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 153/431 (35%), Positives = 224/431 (51%), Gaps = 63/431 (14%)
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
T F + P+LKS + VG+ + +SG+VRA S EM I+ +D + + R
Sbjct: 65 TYFNAGPWLKS---RFTVGKRIVLSGEVRATMSGR--EMPHPEIEPAEDIESTTSVHFNR 119
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANFD-PVPKEITQEFGLLCLFDAYMGIHQPKH 440
P+YP R+ +R + D P+P ++ + L+ L DA IH P
Sbjct: 120 IVPVYPGFERGEQRSFRELTSRVGEQYAHELDDPLPADLRRRLDLMGLPDALRFIHFPP- 178
Query: 441 IDEADL---------ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNA 491
+ADL A +RL FDE F+LQLG L+ G + E G+ +PRL
Sbjct: 179 -GDADLEALDAHQSPAHRRLAFDELFFLQLG---MALKRQGVKAEV-GISFDVSEPRLAK 233
Query: 492 AYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFL 551
A ALP+ LT +Q + E+ WD+ +P PMNRL+QGDVG GKT VA +
Sbjct: 234 AR------------NALPFQLTGAQARVVEELCWDMARPEPMNRLVQGDVGSGKTAVAMV 281
Query: 552 ACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMI 611
+ + + +GYQ A M PTE+LA QH + K+++ + ++ L++ + K R +
Sbjct: 282 SALIALQAGYQVAVMAPTEILAEQHERNFRKVMEPL-----GYRVGLVSAAGTAKAKRQV 336
Query: 612 RKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGM 671
R+ + G++ L +GTH+L+ V F L L ++DEQ RFGV+QR +T MS G
Sbjct: 337 REAVARGEVHLAVGTHALLQADVSFDRLGLVVIDEQHRFGVLQR--------HTLMSKG- 387
Query: 672 AMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
PK P VL M+ATPIPRTLA+ LYGD+ L+ I LPPGR PI+T +
Sbjct: 388 --------PK------PDVLVMTATPIPRTLAMTLYGDLDLSVIDQLPPGRTPIQTRVFN 433
Query: 732 GNEKG--YENV 740
++ YE+V
Sbjct: 434 DKQRALVYESV 444
>gi|416999037|ref|ZP_11939706.1| ATP-dependent DNA helicase RecG [Veillonella parvula
ACS-068-V-Sch12]
gi|333977190|gb|EGL78049.1| ATP-dependent DNA helicase RecG [Veillonella parvula
ACS-068-V-Sch12]
Length = 680
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 167/531 (31%), Positives = 252/531 (47%), Gaps = 83/531 (15%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFIG 264
+D+ ++ + G+ QL G + LL +FPRTY D + DL G +G
Sbjct: 1 MDERLTTIKGIGPGREKQLHKLGITNVTSLLTYFPRTYEDRRTIYRIGDLKSGMTGGVVG 60
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
+I+ + + S LEV+ IAD T ++V + G +K Y
Sbjct: 61 TVIAVQEKRPRPRLSILEVV----IADG--TGPLKIVLFNQGYRKNFY------------ 102
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
K G+ + V GK + Y + N +++ D +G P
Sbjct: 103 -------------KKGQRLYVYGK-----AEFQYGSMQMNTPQMENLGDGGEPDRG-IVP 143
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
IY G++ ++R ++ A + +P E+ + + +DA+ +H P +
Sbjct: 144 IYALADGVSQFVVRSSVRNWFAANHELPEILPVEVRESHHYMSRYDAFKMMHFPDSSEHY 203
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
+ AR +L ++E F +Q GL KE +R P++ L +
Sbjct: 204 EEARHQLAYEELFVMQ--------AGLALLRSKE---QCHRGPKMGPN-----GELMARC 247
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
+ LP+SLT Q A+ +I D++ PM RLLQGDVG GKTVVA L ++ I +GYQ A
Sbjct: 248 IENLPFSLTGDQQRALEDIRIDMEDERPMQRLLQGDVGSGKTVVATLGLLKAIENGYQGA 307
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
M PTE+LA QHYE + + N+ I LLTGS+ K+ I + L G I ++I
Sbjct: 308 LMAPTEILAAQHYEGIRTVCANL-----GITIELLTGSSTKKEKECIYEGLADGRIQMII 362
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+LI E V F L L I+DEQ RFGV QR R K Y
Sbjct: 363 GTHALIQEGVNFHNLGLVIIDEQHRFGVDQRARLQQKGTY-------------------- 402
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
PHVL M+ATPIPRT+ L++YGD++++ I ++PPGR P+KTY ++ + K
Sbjct: 403 ---PHVLIMTATPIPRTMTLSVYGDLAVSLIKEMPPGRKPVKTYAVDSSYK 450
>gi|294791988|ref|ZP_06757136.1| ATP-dependent DNA helicase RecG [Veillonella sp. 6_1_27]
gi|294457218|gb|EFG25580.1| ATP-dependent DNA helicase RecG [Veillonella sp. 6_1_27]
Length = 680
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 166/531 (31%), Positives = 252/531 (47%), Gaps = 83/531 (15%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFIG 264
+D+ ++ + G+ QL G + LL +FPRTY D + DL G +G
Sbjct: 1 MDERLTTIKGIGPGREKQLHKLGITNVTSLLTYFPRTYEDRRTIYRIGDLKSGMTGGVVG 60
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
+I+ + + S LEV+ IAD T ++V + G KK Y
Sbjct: 61 TVIAVQEKRPRPQLSILEVV----IADG--TGPLKIVLFNQGYKKNFY------------ 102
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
K G+ + GK + Y + N +++ D +G P
Sbjct: 103 -------------KKGQRIYAYGK-----AEFQYGTMQMNTPQMENLGDSGEPDRG-IVP 143
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
IY G++ ++R ++ A + +P E+ + + +DA+ +H P +
Sbjct: 144 IYALADGVSQFVVRSSVRNWFAANHELPEILPVEVRESHHYMSRYDAFKMMHFPDSSEHY 203
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
+ AR +L ++E F +Q GL KE +R P++ L +
Sbjct: 204 EEARYQLAYEELFVMQ--------AGLALLRSKEQC---HRGPKMGPN-----GELMAQC 247
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
+ LP+SLT Q A+ +I D++ PM RLLQGDVG GKT+VA L+ ++ I +GYQ A
Sbjct: 248 IENLPFSLTGDQQRALEDIRIDMEDERPMQRLLQGDVGSGKTIVATLSLLKAIENGYQGA 307
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
M PTE+LA QHYE + + N+ I LLTGS+ K+ I + L G I ++I
Sbjct: 308 LMAPTEILAAQHYEGIRTVCANL-----GITIELLTGSSTKKEKEYIYEGLADGRIQMII 362
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+LI E V F L L I+DEQ RFGV QR R K Y
Sbjct: 363 GTHALIQEGVNFHNLGLVIIDEQHRFGVDQRARLQQKGTY-------------------- 402
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
PHVL M+ATPIPRT+ L++YGD++++ I ++PPGR P+KTY ++ + K
Sbjct: 403 ---PHVLIMTATPIPRTMTLSVYGDLAVSLIKEMPPGRKPVKTYAVDSSYK 450
>gi|229547467|ref|ZP_04436192.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX1322]
gi|256854780|ref|ZP_05560144.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis T8]
gi|422687014|ref|ZP_16745204.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX4000]
gi|229307391|gb|EEN73378.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX1322]
gi|256710340|gb|EEU25384.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis T8]
gi|315028368|gb|EFT40300.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX4000]
Length = 678
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 254/527 (48%), Gaps = 94/527 (17%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIIS 268
+S +PG+ + L+ G T+ LL ++P Y D+Q + ++ D + G ++S
Sbjct: 6 LVSVLPGVGPKRAENLQELGIATIEDLLTYYPFRYDDIQEKDLSEIQDQEKVTLKGLVVS 65
Query: 269 SRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ + G S L + E A V+N+ F +
Sbjct: 66 EAVVSRYGYKKSRLTFRMMQEHA---------VINVS-------------------FFNQ 97
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLK-DEDDLSLRAKGRPYPIY 386
PFLK K + E + V GK A R + + I K D +D + PIY
Sbjct: 98 PFLKD---KVVLSEEIAVYGKWDAKRKS----LNGMKILASKGDNEDFA--------PIY 142
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
+ S L I A + + + + P ++ +++ L+ +A +H P + +E+
Sbjct: 143 HVNKKVRQSTLVQLIRTAFEEYGSLIEEILPNDLLEKYRLMSRKEAMWAMHFPSNPEESH 202
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
A++R++F+EFF QL ++GL Q EK GL +Y RL K
Sbjct: 203 QAKRRVVFEEFFLFQLK-----MQGLKKQEKAEKNGLAIQYDVDRL------------KT 245
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
+ LP+ LT +Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G+Q
Sbjct: 246 FTQGLPFELTGAQKKVTNEICRDLRSPKHMQRLLQGDVGSGKTVVAAIALYATMTAGFQG 305
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A MVPTE+LA QH E L +L D +E + ALLTGST K+ R+I ++L G+I +V
Sbjct: 306 ALMVPTEILAQQHMESLQQLFDPLE-----VRTALLTGSTKTKERRLILEELANGEIDIV 360
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GTH+LI + V F L L I DEQ RFGV QR K
Sbjct: 361 VGTHALIQQDVSFHQLGLVITDEQHRFGVNQRKILREK---------------------- 398
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+ P VL M+ATPIPRTLA+ YG+M ++ I ++P GRIPI+T I
Sbjct: 399 -GLKPDVLFMTATPIPRTLAITAYGEMDVSIIDEMPAGRIPIETRWI 444
>gi|269957066|ref|YP_003326855.1| ATP-dependent DNA helicase RecG [Xylanimonas cellulosilytica DSM
15894]
gi|269305747|gb|ACZ31297.1| ATP-dependent DNA helicase RecG [Xylanimonas cellulosilytica DSM
15894]
Length = 749
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 163/528 (30%), Positives = 243/528 (46%), Gaps = 77/528 (14%)
Query: 217 LSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGC 276
L R + L G T+ LL H+PR YA+ G++ + G
Sbjct: 16 LGTRTGNALAKMGLATVDDLLRHYPRRYAE----------------PGQLTDMAKLAIGE 59
Query: 277 SFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGK 336
S L + + + +G + + S + ++ L T F P +
Sbjct: 60 HVSVLARVERTAVRSNASRNGARLEAVVSDGRHELTL--------TFFAKHPGALRYHEQ 111
Query: 337 HKVGE----FVCVSGKVRAMRSNNH--YEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKG 390
VG F V G R R H Y M DV DE L L + P P+YP+
Sbjct: 112 RLVGGASGVFTGVVGVYRGTRQLTHPDYLMVGEGGDVTDDESALYLASL--PIPMYPATA 169
Query: 391 GLNASLLRDTIARALQALPANF--DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLAR 448
+ ++ + L L + DPVP E+ GL +DA +H P+H EA R
Sbjct: 170 SMPTWKIQRCVRTVLDTLTEDDVPDPVPLEVRARAGLPSRYDALKLVHTPQHTQEAYRGR 229
Query: 449 KRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRAL 508
RL F+E F LQ + + + D +P ++ + + AL
Sbjct: 230 HRLRFEEAFVLQ--------AAIAQRRARTAAEDATARPARPGGLLDRFDA-------AL 274
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
P++LTS Q+S ++ +DL QP PM RLLQG+VG GKTVVA A ++VI +G QAA + P
Sbjct: 275 PFTLTSGQVSVGEDLAYDLAQPRPMQRLLQGEVGSGKTVVALRAMLQVIDAGGQAALLAP 334
Query: 569 TELLATQHYEHLLKLLDNMEED------KHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
TE+LA QH L LL + E + ++ALLTGS P + +G+ +
Sbjct: 335 TEVLAAQHARTLRTLLGPLAEGGLLGGAEDGTRVALLTGSLPAAARKTALLQAASGEAGV 394
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
V+GTH+L++E V+F+ L L +VDEQ RFGV QR +K
Sbjct: 395 VVGTHALLSENVQFADLGLVVVDEQHRFGVEQRDALRAK--------------------- 433
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+APH+L M+ATPIPRT+A+ ++GD+ ++ +T +P GR I T ++
Sbjct: 434 -GKVAPHLLVMTATPIPRTVAMTVFGDLEVSSLTQIPAGRAGISTVVV 480
>gi|443478865|ref|ZP_21068560.1| ATP-dependent DNA helicase RecG [Pseudanabaena biceps PCC 7429]
gi|443015792|gb|ELS30608.1| ATP-dependent DNA helicase RecG [Pseudanabaena biceps PCC 7429]
Length = 822
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 163/532 (30%), Positives = 262/532 (49%), Gaps = 74/532 (13%)
Query: 208 DKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI---DLDDGQYFIFIG 264
D I + G+ L + + + +R +L ++PR + D QI DL +G IG
Sbjct: 126 DTEIKDIEGIGSSLAVRFQLLDLHNVRDVLSYYPRDHIDYAR-QIPISDLKNGDTVTVIG 184
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
+ K GC S + T + ++ +GQ K L +F+ G R+
Sbjct: 185 TV-----KKFGCFTS---------PKNPNLTIVEIILRDRTGQIK-----LSRFWTGKRY 225
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKD-EDDLSLRAKGRPY 383
++ + + + + G + SG V+ +S + Y ++VL+ +D + + GR
Sbjct: 226 SNRGWQEIQKRLYPQGCTIAASGVVK--QSKYGLTLENYEVEVLEHTQDTIQSKTVGRVV 283
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
P+YP G+ +R + + L A+ DP+P + +++ ++ L DA +H P
Sbjct: 284 PVYPLTEGITPEAIRSLVVQCLPAVSQIVDPMPDRLLRDYQMIRLPDAIAQVHYPDSSAT 343
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
+ A RL FD++FY +L LY R+ + A + S +
Sbjct: 344 LEQAVIRLTFDKYFYRRLVSLY-------------------RRQQQKAIHFVPKSQAIDQ 384
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
L + +P+ LT++Q I+EI DL+ PMNRL+QGDVG GKT+VA A + I +GYQ
Sbjct: 385 LEKIIPFELTNAQKRVIAEIRADLQGQTPMNRLVQGDVGSGKTIVAVYALLTAIEAGYQT 444
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A M PTE+L QHY +++ + + +LTGS + R I + L+TG++ LV
Sbjct: 445 ALMAPTEVLTEQHYRKIVEWFMQL-----NLPVEILTGSIKTAKRREILRQLETGELPLV 499
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
IGTH+LI + V F+ L LA++DEQ RFG QR R K +D
Sbjct: 500 IGTHALIQDGVNFARLGLAVIDEQHRFGRDQRSRLLQK-------------------GED 540
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
PHVL M+ATPIPRTL L ++ ++ I +LPPGR PI+T I++ +++
Sbjct: 541 ----PHVLIMTATPIPRTLYLT-NSEIEVSIIDELPPGRKPIQTVILKPSQR 587
>gi|116514351|ref|YP_813257.1| ATP-dependent DNA helicase RecG [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|385816013|ref|YP_005852404.1| ATP-dependent DNA helicase [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|418028841|ref|ZP_12667390.1| Hydrolase acting on acid anhydrides in phosphorous-containing
anhydrides [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1632]
gi|116093666|gb|ABJ58819.1| ATP-dependent DNA helicase RecG [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|325126050|gb|ADY85380.1| ATP-dependent DNA helicase [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|354691178|gb|EHE91116.1| Hydrolase acting on acid anhydrides in phosphorous-containing
anhydrides [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1632]
Length = 679
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 170/528 (32%), Positives = 264/528 (50%), Gaps = 99/528 (18%)
Query: 209 KCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGEII 267
+ ++ + G+ + L++ G Y++ LL +FP Y +L+N +D L+DGQ + G I+
Sbjct: 9 RPVTALKGVGAKTAEALQSLGIYSIYDLLFYFPYRYDELENLPLDQLEDGQKVMLKG-IV 67
Query: 268 SSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
++ + + V I +++ ++ F +
Sbjct: 68 ATNPYQNYFGYHKSRVSFKLRI-------DHDIIMVN-------------------FFNQ 101
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMRE-----YNIDVLKDEDDLSLRAKGRP 382
P+L + VG+ + V GK Y++R+ Y + K+ DD G
Sbjct: 102 PWLTK---QLSVGQEIAVYGK---------YDLRKQSLSAYKLLANKNSDD------GMA 143
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
PIY + L+ I A+ +++ + VP+++ + + L+ D + +H PK +
Sbjct: 144 -PIYSINRQIKQKKLQTMIDLAIAESMDEMGNAVPEDLRKHYRLMADQDLVIAMHHPKDL 202
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWS-SL 500
EA AR+ +F EFF L+QM L + K ++ Y + +
Sbjct: 203 AEAKEARRSAVFREFF------LFQMQLALMSSQNKS-----------HSGYAKHYDLEE 245
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
KL ++LP++L+ Q I+EI D+ M RLLQGDVG GKTVVA A + +G
Sbjct: 246 IGKLTKSLPFALSPDQKKVINEIFADMFVDQQMQRLLQGDVGSGKTVVAVFAIYGAVTAG 305
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQAA MVPTE+LA QHY + +L++ ++ALLTGST + R I K+L G I
Sbjct: 306 YQAALMVPTEILANQHYHKISAMLEDF-----GVRVALLTGSTKTMERREIYKELADGSI 360
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+LI E+V F L L I+DEQ RFGVVQR +A++N
Sbjct: 361 NVVIGTHALIQEQVAFKKLGLVIIDEQHRFGVVQR---------------LALIN----- 400
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTY 728
K D+ P +LAM+ATPIPR+LAL +YGD +L++I LP GR PIK+Y
Sbjct: 401 KGDR---PDILAMTATPIPRSLALTVYGDTALSEIRHLPAGRKPIKSY 445
>gi|227517284|ref|ZP_03947333.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0104]
gi|257417234|ref|ZP_05594228.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ARO1/DG]
gi|424677361|ref|ZP_18114213.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ERV103]
gi|424681025|ref|ZP_18117821.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ERV116]
gi|424685274|ref|ZP_18121974.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ERV129]
gi|424688606|ref|ZP_18125211.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ERV25]
gi|424690580|ref|ZP_18127112.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ERV31]
gi|424694316|ref|ZP_18130719.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ERV37]
gi|424697955|ref|ZP_18134267.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ERV41]
gi|424701510|ref|ZP_18137682.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ERV62]
gi|424704539|ref|ZP_18140634.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ERV63]
gi|424711666|ref|ZP_18143878.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ERV65]
gi|424716445|ref|ZP_18145756.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ERV68]
gi|424721961|ref|ZP_18151028.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ERV72]
gi|424724721|ref|ZP_18153659.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ERV73]
gi|424727571|ref|ZP_18156200.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ERV81]
gi|424744487|ref|ZP_18172781.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ERV85]
gi|424753899|ref|ZP_18181828.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ERV93]
gi|227075291|gb|EEI13254.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0104]
gi|257159062|gb|EEU89022.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ARO1/DG]
gi|402352412|gb|EJU87263.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ERV116]
gi|402354654|gb|EJU89457.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ERV103]
gi|402359255|gb|EJU93897.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ERV129]
gi|402360065|gb|EJU94674.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ERV25]
gi|402363778|gb|EJU98236.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ERV31]
gi|402370972|gb|EJV05151.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ERV37]
gi|402371541|gb|EJV05698.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ERV62]
gi|402374191|gb|EJV08227.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ERV41]
gi|402381561|gb|EJV15264.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ERV63]
gi|402383098|gb|EJV16715.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ERV65]
gi|402387962|gb|EJV21414.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ERV68]
gi|402389998|gb|EJV23370.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ERV72]
gi|402394008|gb|EJV27207.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ERV73]
gi|402396246|gb|EJV29315.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ERV81]
gi|402398818|gb|EJV31735.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ERV85]
gi|402403425|gb|EJV36099.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ERV93]
Length = 678
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 173/527 (32%), Positives = 254/527 (48%), Gaps = 94/527 (17%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIIS 268
+S +PG+ + L+ G T+ LL ++P Y D+Q + ++ D + G ++S
Sbjct: 6 LVSVLPGVGPKRAENLQELGIATIEDLLTYYPFRYDDIQEKDLSEIQDQEKVTLKGLVVS 65
Query: 269 SRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ + G S L + E A V+N+ F +
Sbjct: 66 EAVVSRYGYKKSRLTFRMMQEHA---------VINVS-------------------FFNQ 97
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLK-DEDDLSLRAKGRPYPIY 386
PFLK K + E + V GK A R + + I K D +D S PIY
Sbjct: 98 PFLKD---KVVLSEEIAVYGKWDAKRKS----LNGMKILASKGDNEDFS--------PIY 142
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
+ S L I A + + + + P ++ +++ L+ +A +H P + +E+
Sbjct: 143 HVNKKVRQSTLVQLIRTAFEEYGSLVEEILPNDLLEKYRLMPRKEAMWAMHFPSNPEESH 202
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
A++R++F+EFF QL ++GL Q EK GL +Y RL K
Sbjct: 203 QAKRRVVFEEFFLFQLK-----MQGLKKQEKAEKNGLAIQYDVDRL------------KT 245
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
+ LP+ LT +Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G+Q
Sbjct: 246 FTQGLPFELTGAQKKVTNEICRDLRSPKHMQRLLQGDVGSGKTVVAAIALYATMTAGFQG 305
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A MVPTE+LA QH E L +L D +E + ALLTGST K+ R+I ++L G+I +V
Sbjct: 306 ALMVPTEILAQQHMESLQQLFDPLE-----VRTALLTGSTKTKERRLILEELANGEIDIV 360
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GTH+LI + V F L L I DEQ RFGV QR K
Sbjct: 361 VGTHALIQQDVSFHQLGLVITDEQHRFGVNQRKILREK---------------------- 398
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+ P VL M+ATPIPRTLA+ YG+M ++ I ++P GRIPI+T I
Sbjct: 399 -GLKPDVLFMTATPIPRTLAITAYGEMDVSIIDEMPAGRIPIETRWI 444
>gi|313124079|ref|YP_004034338.1| ATP-dependent DNA helicase recg [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312280642|gb|ADQ61361.1| ATP-dependent DNA helicase RecG [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
Length = 679
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 170/528 (32%), Positives = 264/528 (50%), Gaps = 99/528 (18%)
Query: 209 KCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGEII 267
+ ++ + G+ + L++ G Y++ LL +FP Y +L+N +D L+DGQ + G I+
Sbjct: 9 RPVTALKGVGAKTAEALQSLGIYSIYDLLFYFPYRYDELENLPLDQLEDGQKVMLKG-IV 67
Query: 268 SSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
++ + + V I +++ ++ F +
Sbjct: 68 ATNPYQNYFGYHKSRVSFKLRI-------DHDIIMVN-------------------FFNQ 101
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMRE-----YNIDVLKDEDDLSLRAKGRP 382
P+L + VG+ + V GK Y++R+ Y + K+ DD G
Sbjct: 102 PWLTK---QLSVGQEIAVYGK---------YDLRKQSLSAYKLLANKNSDD------GMA 143
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
PIY + L+ I A+ +++ + VP+++ + + L+ D + +H PK +
Sbjct: 144 -PIYSVNRQIKQKKLQTMIDLAIAESMDEIGNAVPEDLRKHYRLMADQDLVIAMHHPKDL 202
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWS-SL 500
EA AR+ +F EFF L+QM L + K ++ Y + +
Sbjct: 203 TEAKEARRSAVFREFF------LFQMQLALMSSQNKS-----------HSGYAKHYDLEE 245
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
KL ++LP++L+ Q I+EI D+ M RLLQGDVG GKTVVA A + +G
Sbjct: 246 IGKLTKSLPFALSPDQKKVINEIFADMFVDQQMQRLLQGDVGSGKTVVAVFAIYGAVTAG 305
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQAA MVPTE+LA QHY + +L++ ++ALLTGST + R I K+L G I
Sbjct: 306 YQAALMVPTEILANQHYHKISAMLEDF-----GVRVALLTGSTKTMERREIYKELADGSI 360
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+LI E+V F L L I+DEQ RFGVVQR +A++N
Sbjct: 361 NVVIGTHALIQEQVAFKKLGLVIIDEQHRFGVVQR---------------LALIN----- 400
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTY 728
K D+ P +LAM+ATPIPR+LAL +YGD +L++I LP GR PIK+Y
Sbjct: 401 KGDR---PDILAMTATPIPRSLALTVYGDTALSEIRHLPAGRKPIKSY 445
>gi|282850344|ref|ZP_06259723.1| ATP-dependent DNA helicase RecG [Veillonella parvula ATCC 17745]
gi|282579837|gb|EFB85241.1| ATP-dependent DNA helicase RecG [Veillonella parvula ATCC 17745]
Length = 680
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 167/531 (31%), Positives = 253/531 (47%), Gaps = 83/531 (15%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFIG 264
+D+ ++ + G+ QL G + LL +FPRTY D + DL G +G
Sbjct: 1 MDERLTTIKGIGPGREKQLHKLGITNVTSLLTYFPRTYEDRRTIYSIGDLKSGMTGGVVG 60
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
+I+ + + S LEV+ IAD T ++V + G KK Y
Sbjct: 61 TVIAVQEKRPRPRLSILEVV----IADG--TGPLKIVLFNQGYKKNFY------------ 102
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
K G+ + GK + Y + N +++ D +G P
Sbjct: 103 -------------KKGQRIYAYGK-----AEFQYGYMQMNTPQMENLGDGGEPDRG-IVP 143
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
IY G++ ++R T+ A + +P E+ ++ + +DA+ +H P +
Sbjct: 144 IYALADGVSQFVVRSTVRNWFAANHELPEILPVEVREDHHYMSRYDAFKMMHFPDSSELY 203
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
+ AR +L ++E F +Q GL KE +R P++ L +
Sbjct: 204 EKARYQLSYEELFVMQ--------AGLALLRNKEQC---HRGPKMGPN-----GELMAQC 247
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
+ LP+SLT Q A+ +I D++ PM RLLQGDVG GKT+VA L+ ++ I +GYQ A
Sbjct: 248 IENLPFSLTGDQQRALEDIRIDMEDERPMQRLLQGDVGSGKTIVATLSLLKAIENGYQGA 307
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
M PTE+LA QHYE + + N+ I LLTGS+ K+ I + L G I ++I
Sbjct: 308 LMAPTEILAAQHYEGIRTVCANL-----GITIELLTGSSTKKEKECIYEGLADGRIQMII 362
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+LI E V F L L I+DEQ RFGV QR R K Y
Sbjct: 363 GTHALIQEGVNFHNLGLVIIDEQHRFGVDQRARLQQKGTY-------------------- 402
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
PHVL M+ATPIPRT+ L++YGD++++ I ++PPGR P+KTY ++ + K
Sbjct: 403 ---PHVLIMTATPIPRTMTLSVYGDLAVSLIKEMPPGRKPVKTYAVDSSYK 450
>gi|312902137|ref|ZP_07761397.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0470]
gi|311290801|gb|EFQ69357.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0470]
Length = 678
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 254/527 (48%), Gaps = 94/527 (17%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIIS 268
+S +PG+ + L+ G T+ LL ++P Y D+Q + ++ D + G ++S
Sbjct: 6 LVSVLPGVGPKRAENLQELGIATIEDLLTYYPFRYDDIQEKDLSEIQDQEKVTLKGLVVS 65
Query: 269 SRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ + G S L + E A V+N+ F +
Sbjct: 66 EAVVSRYGYKKSRLTFRMMQEHA---------VINVS-------------------FFNQ 97
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLK-DEDDLSLRAKGRPYPIY 386
PFLK K + E + V GK A R + + I K D +D + PIY
Sbjct: 98 PFLKD---KVVLSEEIAVYGKWDAKRKS----LNGMKILASKGDNEDFA--------PIY 142
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
+ S L I A + + + + P ++ +++ L+ +A +H P + +E+
Sbjct: 143 HVNKKVRQSTLVQLIRTAFEEYGSLIEEILPNDLLEKYRLMSRKEAMWAMHFPSNPEESH 202
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
A++R++F+EFF QL ++GL Q EK GL +Y RL K
Sbjct: 203 QAKRRVVFEEFFLFQLK-----MQGLKKQEKAEKNGLAIQYDVDRL------------KT 245
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
+ LP+ LT +Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G+Q
Sbjct: 246 FTQGLPFELTGAQKKVTNEICRDLRSPKHMQRLLQGDVGSGKTVVAAIALYATMTAGFQG 305
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A MVPTE+LA QH E L +L D +E + ALLTGST K+ R+I ++L G+I +V
Sbjct: 306 ALMVPTEILAQQHMESLQQLFDPLE-----VRTALLTGSTKTKERRLILEELANGEIDIV 360
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GTH+LI + V F L L I DEQ RFGV QR K
Sbjct: 361 VGTHALIQQDVSFHQLGLVITDEQHRFGVNQRKILREK---------------------- 398
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+ P VL M+ATPIPRTLA+ YG+M ++ I ++P GRIPI+T I
Sbjct: 399 -GLKPDVLFMTATPIPRTLAITAYGEMDVSIIDEMPAGRIPIETRWI 444
>gi|104774262|ref|YP_619242.1| ATP-dependent DNA helicase RecG [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|103423343|emb|CAI98190.1| ATP-dependent DNA helicase RecG [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
Length = 679
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 170/528 (32%), Positives = 264/528 (50%), Gaps = 99/528 (18%)
Query: 209 KCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGEII 267
+ ++ + G+ + L++ G Y++ LL +FP Y +L+N +D L+DGQ + G I+
Sbjct: 9 RPVTALKGVGAKTAEALQSLGIYSIYDLLFYFPYRYDELENLPLDQLEDGQKVMLKG-IV 67
Query: 268 SSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
++ + + V I +++ ++ F +
Sbjct: 68 ATNPYQNYFGYHKSRVSFKLRI-------DHDIIMVN-------------------FFNQ 101
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMRE-----YNIDVLKDEDDLSLRAKGRP 382
P+L + VG+ + V GK Y++R+ Y + K+ DD G
Sbjct: 102 PWLTK---QLSVGQEIAVYGK---------YDLRKQSLSAYKLLANKNSDD------GMA 143
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
PIY + L+ I A+ +++ + VP+++ + + L+ D + +H PK +
Sbjct: 144 -PIYSINRQIKQKKLQTMIDLAIAESMDEMGNAVPEDLRKHYRLMADQDLVIAMHHPKDL 202
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWS-SL 500
EA AR+ +F EFF L+QM L + K ++ Y + +
Sbjct: 203 AEAKEARRSAVFREFF------LFQMQLALMSSQNKS-----------HSGYAKHYDLEE 245
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
KL ++LP++L+ Q I+EI D+ M RLLQGDVG GKTVVA A + +G
Sbjct: 246 IGKLTKSLPFALSPDQKKVINEIFADMFVDQQMQRLLQGDVGSGKTVVAVFAIYGAVTAG 305
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQAA MVPTE+LA QHY + +L++ ++ALLTGST + R I K+L G I
Sbjct: 306 YQAALMVPTEILANQHYHKISAMLEDF-----GVRVALLTGSTKTMERREIYKELADGSI 360
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+LI E+V F L L I+DEQ RFGVVQR +A++N
Sbjct: 361 NVVIGTHALIQEQVAFKKLGLVIIDEQHRFGVVQR---------------LALIN----- 400
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTY 728
K D+ P +LAM+ATPIPR+LAL +YGD +L++I LP GR PIK+Y
Sbjct: 401 KGDR---PDILAMTATPIPRSLALTVYGDTALSEIRHLPAGRKPIKSY 445
>gi|312793403|ref|YP_004026326.1| ATP-dependent DNA helicase recg [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180543|gb|ADQ40713.1| ATP-dependent DNA helicase RecG [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 679
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 176/538 (32%), Positives = 254/538 (47%), Gaps = 103/538 (19%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFI 263
+L+K I + G+ + + G LL H PR Y D + +L DG+ F+
Sbjct: 3 VLEKDIRFLKGVGENREKLFKKLGIKKAEDLLWHIPRKYLDYSRLKKIRELCDGEIESFV 62
Query: 264 GEI------ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK 317
++ I +R +K I+ + D+ N D
Sbjct: 63 AKVAGKPVEIETRSVK----------IIKIPVEDSTGVVTTVWFNQD------------- 99
Query: 318 FFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDE---DDL 374
++K++ K GE C SGK+ E + + I+V E D
Sbjct: 100 -----------YIKNV---LKEGEIFCFSGKI---------ERKGFYIEVKNPEFEKYDQ 136
Query: 375 SLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYM 433
L GR P+Y S GL+ ++R+ + L + D +P I Q++ L + A
Sbjct: 137 QLLHTGRIVPVYNSTEGLSQKVIRNIVNNLLHQVDGMLIDIIPPYIRQKYNLRDINFAIK 196
Query: 434 GIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAY 493
IH P++ +LARKRL+F+EF YL L + E + + EG+
Sbjct: 197 NIHFPENKLSLELARKRLVFEEF-YLLQLSLLLLKENIE---KNEGI------------K 240
Query: 494 MEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLAC 553
+E S K+ + LP+ LT +Q ++EI DL+ MNRL+QGDVGCGKTVVA +
Sbjct: 241 IENAQSSLKEFEKLLPFELTEAQKRVLAEIAQDLESTKQMNRLIQGDVGCGKTVVALASA 300
Query: 554 MEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRK 613
I +GYQ A M PTE+LA QHY K N K + LL GSTP K+ +I K
Sbjct: 301 YATIKAGYQVALMAPTEVLALQHYNECKKYFGN------KFNVRLLIGSTPKKEKEIILK 354
Query: 614 DLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAM 673
+L+ G +VIGTH+LI ++V+F L LAI DEQ RFGV+QR K
Sbjct: 355 ELEHGLCKMVIGTHALIQDEVKFKNLGLAITDEQHRFGVIQRVELTKK------------ 402
Query: 674 VNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
GS +P++L M+ATPIPRTL+L LYGD+ ++ I LPPGR I TY ++
Sbjct: 403 ----GS-------SPNILVMTATPIPRTLSLVLYGDLDISIIDQLPPGRKKILTYAVD 449
>gi|210622470|ref|ZP_03293175.1| hypothetical protein CLOHIR_01123 [Clostridium hiranonis DSM 13275]
gi|210154183|gb|EEA85189.1| hypothetical protein CLOHIR_01123 [Clostridium hiranonis DSM 13275]
Length = 691
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 175/540 (32%), Positives = 265/540 (49%), Gaps = 89/540 (16%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGE 265
++++ I V G+ + +L G YT++ LL++FPR + D
Sbjct: 7 VINESIQYVKGIGPKKAEKLNKLGIYTIKDLLYYFPRQFEDR------------------ 48
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDS-GQKKKIYLHLKKFFRGTRF 324
S ++ I E + + T + NI+S KK + + T F
Sbjct: 49 -------------SVIKKIAQLE-DEEKVTVKALITNIESYTPKKGMTITRIDVKDDTGF 94
Query: 325 TSIPFLKS--IEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
+ F I+ +VG+ + GKV+ ++ E+ ++ L S + G+
Sbjct: 95 AKLTFFNREYIKNTFRVGDSILAFGKVK--KNGRFVELNSCELEYL----STSPKNIGKL 148
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
P+YP G+ + +T+ + + +P+ + +++ L + A IH PK
Sbjct: 149 VPVYPLSYGITNKDIMNTVRMVFENKDIKIPEYMPEYLLKKYRLCGIDYAIKNIHFPKDK 208
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
+ +A RLIF+E LQLG M +G G EK G+L K R RL+
Sbjct: 209 ESLKVALYRLIFEELLVLQLGLF--MYKG-GNSNEK-GILFK-RDQRLD----------- 252
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
++L +LP+SLT +Q A++EII D+ MNRL+QGDVG GKTVVA LA E + +GY
Sbjct: 253 -EVLESLPFSLTRAQNRALNEIIDDMCSEKVMNRLVQGDVGSGKTVVALLALAECVFNGY 311
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q A M PTE+LA QHYE + +++ + LLTGS KQ I + G+I
Sbjct: 312 QGALMAPTEILAQQHYESFTETFEDI-----GINVELLTGSVTKKQKEGILHRARDGEID 366
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
++IGTH+LI + VEF + L I DEQ RFGV QRG+ +SK
Sbjct: 367 ILIGTHALIEDNVEFKNIGLVITDEQHRFGVRQRGKLSSK-------------------- 406
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVY 741
+P +L M+ATPIPRTLAL LYGD+ ++ I +LPPGR PI+T +E +K + VY
Sbjct: 407 ---GTSPDILVMTATPIPRTLALILYGDLDISIIDELPPGRQPIETIAVE--KKKRDKVY 461
>gi|416363410|ref|ZP_11682651.1| ATP-dependent DNA helicase RecG, partial [Clostridium botulinum C
str. Stockholm]
gi|338194191|gb|EGO86703.1| ATP-dependent DNA helicase RecG [Clostridium botulinum C str.
Stockholm]
Length = 590
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 150/418 (35%), Positives = 219/418 (52%), Gaps = 62/418 (14%)
Query: 319 FRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRA 378
F G F K I+ K K+ E + GKV+ R +++ N ++L++ + L
Sbjct: 8 FEGKWFNQ----KYIKNKFKLNEECIILGKVKMDR----HKISIINPNILENTEKLL--- 56
Query: 379 KGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQP 438
P Y KG L + TI L + + +PK I ++ LL L A IH P
Sbjct: 57 --NITPKYSLKGNLTNNFFNKTINYILSNITI-VENIPKNILDKYDLLSLDKAIRSIHNP 113
Query: 439 KHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWS 498
K +E A KRL F E F L L +L +Y+K + A + +
Sbjct: 114 KQEEELLNAMKRLKFQELFTYSLKLL---------------MLKQYKKSKGIAFKI---A 155
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
K L +LP++LT +Q + EI+ D K+ PMNRL+QGDVG GKT+V+ +A V+
Sbjct: 156 EELKILKESLPFTLTDAQNKVVREILIDEKRDRPMNRLVQGDVGSGKTIVSLIALFNVVK 215
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+GYQ M PTE+LA QHY+ + LL +K +I LLTGST K+ +I+ L++G
Sbjct: 216 NGYQGVLMAPTEILANQHYQQAINLL-----EKFNVRIELLTGST--KKKDIIKSKLKSG 268
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+I +VIGTH+L+ + VEF+ L + + DEQ RFGV QR SK+Y
Sbjct: 269 EIDIVIGTHALLEDDVEFNNLGMVVTDEQHRFGVKQR----SKIY--------------- 309
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKG 736
+++ VL M+ATPIPRTLAL+LYGD+ ++ I LPPGR I T+ + N++
Sbjct: 310 ----NKNNNIDVLVMTATPIPRTLALSLYGDLDISTIDKLPPGRKKIDTFSVRENKRN 363
>gi|423326980|ref|ZP_17304788.1| ATP-dependent DNA helicase RecG [Myroides odoratimimus CCUG 3837]
gi|404607550|gb|EKB07052.1| ATP-dependent DNA helicase RecG [Myroides odoratimimus CCUG 3837]
Length = 700
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 176/532 (33%), Positives = 265/532 (49%), Gaps = 88/532 (16%)
Query: 206 LLDKCISCVPGLS-KRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIG 264
LLD I + G+ +R G +T R LLH +P Y +D QY+ I
Sbjct: 5 LLDTPIEYLKGVGPQRADLFKRELGIFTYRDLLHLYPNRY---------IDRTQYYK-IN 54
Query: 265 EIISSRGMKAGCSFSFLEV-IVG--CEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRG 321
E+ ++ EV IVG I E G +V + +I L +F+G
Sbjct: 55 ELYNNNS----------EVQIVGKIIHIKTVEQKRGKRLVATFTDGTGQIEL---VWFQG 101
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
++ I+ K+ GK+ + NN + M +D+L++ A
Sbjct: 102 YKW--------IQENLKLNTPYVAFGKLNSF--NNTFSMPHPELDLLEEHQKNIANAMQA 151
Query: 382 PYPIYPSKGGL--NASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPK 439
YP G N S+++ + + P D + E ++ L+ + +A + IH PK
Sbjct: 152 VYPSTEKFGARISNKSIIKMMMQLVKETHPLFMDTLSDEFKRKLNLISMQEALINIHFPK 211
Query: 440 HIDEADLARKRLIFDEFFYLQLGRLYQML----EGLGTQFEKEGLLDKYRKPRLNAAYME 495
++D + A+ RL F+E FY+QL L + + + G FEK G N Y E
Sbjct: 212 NMDMLNKAQFRLKFEELFYVQLQLLIKNIARKDKIKGYPFEKVG-------DYFNTFYSE 264
Query: 496 GWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
LP+ LT +Q + EI D+ P MNRLLQGDVG GKT+VAF++C+
Sbjct: 265 -----------HLPFPLTGAQKRVLKEIRNDVGAPAQMNRLLQGDVGSGKTIVAFMSCLL 313
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
+ +G+QA + PTE+LATQHY + +L + + KI LLTGST + R++ ++L
Sbjct: 314 ALDNGFQACIVAPTEILATQHYVGIKELGEPL-----GLKIKLLTGSTKTAERRVLHEEL 368
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
+G++ ++IGTH+L +KV F L LAI+DEQ RFGV QR SKL++ +
Sbjct: 369 ASGELHILIGTHALFEDKVIFKNLGLAIIDEQHRFGVEQR----SKLWHKN--------- 415
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PHVL M+ATPIPRTLA++LYGD+ ++ I +LPPGR PI+T
Sbjct: 416 ---------ELPPHVLVMTATPIPRTLAMSLYGDLDISVIDELPPGRKPIQT 458
>gi|257420441|ref|ZP_05597431.1| ATP-dependent DNA helicase recG [Enterococcus faecalis X98]
gi|422708008|ref|ZP_16765542.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0043]
gi|257162265|gb|EEU92225.1| ATP-dependent DNA helicase recG [Enterococcus faecalis X98]
gi|315154698|gb|EFT98714.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0043]
Length = 678
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 255/527 (48%), Gaps = 94/527 (17%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIIS 268
+S +PG+ + L+ G T+ +LL ++P Y D+Q + ++ D + G ++S
Sbjct: 6 LVSVLPGVGPKRAENLQELGIATIEELLTYYPFRYDDIQEKDLSEIQDQEKVTLKGLVVS 65
Query: 269 SRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ + G S L + E A V+N+ F +
Sbjct: 66 EAVVSRYGYKKSRLTFRMMQEHA---------VINVS-------------------FFNQ 97
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLK-DEDDLSLRAKGRPYPIY 386
PFLK K + E + V GK A R + + I K D +D + PIY
Sbjct: 98 PFLKD---KVVLSEEIAVYGKWDAKRKS----LNGMKILASKGDNEDFA--------PIY 142
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
+ S L I A + + + + P ++ +++ L+ +A +H P + +E+
Sbjct: 143 HVNKKVRQSTLVQLIRTAFEEYGSLVEEILPNDLLEKYRLMPRKEAMWAMHFPSNPEESH 202
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
A++R++F+EFF QL ++GL Q EK GL +Y RL K
Sbjct: 203 QAKRRVVFEEFFLFQLK-----MQGLKKQEKAEKNGLAIQYDVDRL------------KT 245
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
+ LP+ LT +Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G+Q
Sbjct: 246 FTQGLPFELTGAQKKVTNEICRDLRSPKHMQRLLQGDVGSGKTVVAAIALYATMTAGFQG 305
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A MVPTE+LA QH E L +L D +E + ALLTGST K+ R+I ++L G+I +V
Sbjct: 306 ALMVPTEILAQQHMESLQQLFDPLE-----VRTALLTGSTKTKERRLILEELANGEIDIV 360
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GTH+LI + V F L L I DEQ RFGV QR K
Sbjct: 361 VGTHALIQQDVSFHQLGLVITDEQHRFGVNQRKILREK---------------------- 398
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+ P VL M+ATPIPRTLA+ YG+M ++ I ++P GRIPI+T I
Sbjct: 399 -GLKPDVLFMTATPIPRTLAITAYGEMDVSIIDEMPAGRIPIETRWI 444
>gi|373110370|ref|ZP_09524639.1| ATP-dependent DNA helicase RecG [Myroides odoratimimus CCUG 10230]
gi|371643012|gb|EHO08570.1| ATP-dependent DNA helicase RecG [Myroides odoratimimus CCUG 10230]
Length = 700
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 176/532 (33%), Positives = 265/532 (49%), Gaps = 88/532 (16%)
Query: 206 LLDKCISCVPGLS-KRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIG 264
LLD I + G+ +R G +T R LLH +P Y +D QY+ I
Sbjct: 5 LLDTPIEYLKGVGPQRADLFKRELGIFTYRDLLHLYPNRY---------IDRTQYYK-IN 54
Query: 265 EIISSRGMKAGCSFSFLEV-IVG--CEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRG 321
E+ ++ EV IVG I E G +V + +I L +F+G
Sbjct: 55 ELYNNNS----------EVQIVGKIIHIKTVEQKRGKRLVATFTDGTGQIEL---VWFQG 101
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
++ I+ K+ GK+ + NN + M +D+L++ A
Sbjct: 102 YKW--------IQENLKLNTPYVAFGKLNSF--NNTFSMPHPELDLLEEHQKNIANAMQA 151
Query: 382 PYPIYPSKGGL--NASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPK 439
YP G N S+++ + + P D + E ++ L+ + +A + IH PK
Sbjct: 152 VYPSTEKFGARISNKSIIKMMMQLVKETHPLFIDTLSDEFKRKLNLISMQEALINIHFPK 211
Query: 440 HIDEADLARKRLIFDEFFYLQLGRLYQML----EGLGTQFEKEGLLDKYRKPRLNAAYME 495
++D + A+ RL F+E FY+QL L + + + G FEK G N Y E
Sbjct: 212 NMDMLNKAQFRLKFEELFYVQLQLLIKNIARKDKIKGYPFEKVG-------DYFNTFYSE 264
Query: 496 GWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
LP+ LT +Q + EI D+ P MNRLLQGDVG GKT+VAF++C+
Sbjct: 265 -----------HLPFPLTGAQKRVLKEIRNDVGAPAQMNRLLQGDVGSGKTIVAFMSCLL 313
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
+ +G+QA + PTE+LATQHY + +L + + KI LLTGST + R++ ++L
Sbjct: 314 ALDNGFQACIVAPTEILATQHYVGIKELGEPL-----GLKIKLLTGSTKTAERRVLHEEL 368
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
+G++ ++IGTH+L +KV F L LAI+DEQ RFGV QR SKL++ +
Sbjct: 369 ASGELHILIGTHALFEDKVIFKNLGLAIIDEQHRFGVEQR----SKLWHKN--------- 415
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PHVL M+ATPIPRTLA++LYGD+ ++ I +LPPGR PI+T
Sbjct: 416 ---------ELPPHVLVMTATPIPRTLAMSLYGDLDISVIDELPPGRKPIQT 458
>gi|312135040|ref|YP_004002378.1| ATP-dependent DNA helicase recg [Caldicellulosiruptor owensensis
OL]
gi|311775091|gb|ADQ04578.1| ATP-dependent DNA helicase RecG [Caldicellulosiruptor owensensis
OL]
Length = 679
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 175/534 (32%), Positives = 250/534 (46%), Gaps = 95/534 (17%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFI 263
+L+K I + G+ + + G LL H PR Y D + +L DG+ FI
Sbjct: 3 VLEKDIRFLKGVGENREKLFKKLGIKKAEDLLWHIPRKYLDYSKLKKIRELCDGEVESFI 62
Query: 264 GEIISSRGMKAGCSFSFLEVIV--GCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRG 321
++ S +++ V G + T + D + N+
Sbjct: 63 AKVAGKPVEIETKSIKIIKIPVEDGTGVVTTVWFNQDYIKNV------------------ 104
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDE---DDLSLRA 378
K GE C SGK+ E + + I+V E D L
Sbjct: 105 ---------------LKEGEIFCFSGKI---------ERKGFYIEVKNPEFEKYDQHLLH 140
Query: 379 KGRPYPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQ 437
GR P+Y S GL+ ++R+ I L + D +P I Q++ L + A IH
Sbjct: 141 TGRIVPVYNSTEGLSQKVIRNIINNLLNQIDGALEDIIPAYIKQKYNLKDINFAIKNIHF 200
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGW 497
P++ +LARKRL+F+EF YL L + E + + EGL +E
Sbjct: 201 PENKLSLELARKRLVFEEF-YLLQLALLLLKENIE---KNEGL------------KIENA 244
Query: 498 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
+ ++ + LP+ LT +Q ++EI DL+ MNRL+QGDVGCGKTVVA + I
Sbjct: 245 QNSLEEFEKFLPFELTEAQKRVLAEIAQDLESTKQMNRLIQGDVGCGKTVVALASAYATI 304
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
+GYQ A M PTE+LA QHY K N K + LL GSTP K+ +I K+L+
Sbjct: 305 KAGYQVALMAPTEVLALQHYNECKKYFGN------KFNVRLLIGSTPKKEKEIILKELEH 358
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
G +VIGTH+LI ++V+F L LAI DEQ RFGV+QR K
Sbjct: 359 GLCKMVIGTHALIQDEVKFKNLGLAITDEQHRFGVIQRVELTKK---------------- 402
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
GS +P++L M+ATPIPRTL+L LYGD+ ++ I LPPGR I TY ++
Sbjct: 403 GS-------SPNILVMTATPIPRTLSLVLYGDLDISIIDQLPPGRKKILTYAVD 449
>gi|281412262|ref|YP_003346341.1| ATP-dependent DNA helicase RecG [Thermotoga naphthophila RKU-10]
gi|281373365|gb|ADA66927.1| ATP-dependent DNA helicase RecG [Thermotoga naphthophila RKU-10]
Length = 763
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 177/526 (33%), Positives = 261/526 (49%), Gaps = 81/526 (15%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L I G+ +L+ G TLR LL FPR Y D + L+D + GE
Sbjct: 96 LSTDIQYAKGVGPNRKKKLKKLGIETLRDLLEFFPRDYEDRRKI-FKLND----LLPGEK 150
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLH-LKKFFRGTRFT 325
++++G IV E T + +NI + +H L K+F
Sbjct: 151 VTTQGK-----------IVSVE------TKRFQNMNILTAVLSDGLVHVLLKWFNQEYLQ 193
Query: 326 SIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPI 385
+ +LK + GK V V+G V++ YE+ +N +V E + + R PI
Sbjct: 194 T--YLKQLTGKE-----VFVTGTVKSNAYTGQYEI--HNAEVTPKEGEYARRI----LPI 240
Query: 386 YPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
Y G++ +R + +L + + +P+ I ++ LL + DAY G+H PK
Sbjct: 241 YRLTSGISQKQMRKIFEENIPSLCCSLKETLPERILEKRKLLGVKDAYYGMHFPKTFYHL 300
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
+ AR+RL ++E F LQL + + + EK G + K +EG L ++
Sbjct: 301 EKARERLAYEELFVLQLA-----FQKIRKEREKHGGIPKK---------IEG--KLAEEF 344
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
+++LP+ LT+SQ A EI D+ PMNRLLQGDVG GKTVVA LA ++ +G+Q A
Sbjct: 345 IKSLPFKLTNSQKRAHQEIRNDMISEKPMNRLLQGDVGSGKTVVAQLAILDNYEAGFQTA 404
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
FMVPT +LA QHY ++ K +ALL G+T + I+ L+ G I +VI
Sbjct: 405 FMVPTSILAIQHYRRTVESF-----SKFNIHVALLIGATTPSEKEKIKSGLRNGQIDVVI 459
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+LI E V F L L I+DEQ RFGV QR M+ G MV++
Sbjct: 460 GTHALIQEDVHFKNLGLVIIDEQHRFGVKQREAL--------MNKG-KMVDT-------- 502
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
L MSATPIPR++ALA YGD+ +T I ++PPGR ++T ++
Sbjct: 503 ------LVMSATPIPRSMALAFYGDLDVTVIDEMPPGRKEVQTMLV 542
>gi|312127713|ref|YP_003992587.1| ATP-dependent DNA helicase recg [Caldicellulosiruptor
hydrothermalis 108]
gi|311777732|gb|ADQ07218.1| ATP-dependent DNA helicase RecG [Caldicellulosiruptor
hydrothermalis 108]
Length = 679
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 152/398 (38%), Positives = 210/398 (52%), Gaps = 58/398 (14%)
Query: 338 KVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDE---DDLSLRAKGRPYPIYPSKGGLNA 394
K GE C SGK+ E + + I+V E D L GR P+Y S GL+
Sbjct: 106 KEGEIFCFSGKI---------ERKGFYIEVKNPEFEKYDQHLLHTGRIVPVYNSTEGLSQ 156
Query: 395 SLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIF 453
++R+ + L+ + D +P I Q++ L + A IH P++ +LARKRL+F
Sbjct: 157 KVIRNIVNNLLKQVDGMLIDIIPPYIRQKYNLSEINFAIKNIHFPENKLSLELARKRLVF 216
Query: 454 DEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLT 513
+EF YL L + E + + EG+ +E S K+ + LP+ LT
Sbjct: 217 EEF-YLLQLSLLLLKENIE---KNEGI------------KIENVQSSLKEFEKLLPFELT 260
Query: 514 SSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLA 573
+Q ++EI DL+ MNRL+QGDVGCGKTVVA + I +GYQ A M PTE+LA
Sbjct: 261 EAQKRVLAEIAQDLESTKQMNRLIQGDVGCGKTVVALASAYATIKAGYQVALMAPTEVLA 320
Query: 574 TQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEK 633
QHY K N K + LL GSTP K+ +I K+L+ G +VIGTH+LI ++
Sbjct: 321 LQHYNECKKYFGN------KFNVRLLIGSTPKKEKEIILKELEHGLCKMVIGTHALIQDE 374
Query: 634 VEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAM 693
V+F L LAI DEQ RFGV+QR K GS +P++L M
Sbjct: 375 VKFKNLGLAITDEQHRFGVIQRVELTKK----------------GS-------SPNILVM 411
Query: 694 SATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
+ATPIPRTL+L LYGD+ ++ I LPPGR I TY ++
Sbjct: 412 TATPIPRTLSLVLYGDLDISIIDQLPPGRKKILTYAVD 449
>gi|442321478|ref|YP_007361499.1| ATP-dependent DNA helicase RecG [Myxococcus stipitatus DSM 14675]
gi|441489120|gb|AGC45815.1| ATP-dependent DNA helicase RecG [Myxococcus stipitatus DSM 14675]
Length = 1159
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 176/544 (32%), Positives = 259/544 (47%), Gaps = 104/544 (19%)
Query: 217 LSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN--AQIDLDDGQYFIFIGEIISSRGMKA 274
L RL L+ G + +L PR Y D + +L+ G+ + +G + + +
Sbjct: 475 LGPRLISALDKKGLRRMGDILFLLPRCYEDRRRLLTIAELEPGERGVTVGMVKVADFVPG 534
Query: 275 GCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIE 334
+VG +SG T F + P+LKS
Sbjct: 535 KQGRRMFRAVVG-------DSSGS--------------------IAATYFNAGPWLKS-- 565
Query: 335 GKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPS--KGGL 392
+ VG+ + +SG+VRA S EM I+ +D D + R P+YP +G
Sbjct: 566 -RFTVGKRLVLSGEVRATMSGR--EMAHPEIEPAEDLDSATSVHFNRIVPVYPGFERGEQ 622
Query: 393 N-----ASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL- 446
AS + + A AL+ DP+P E+ + L+ L DA IH P ++ADL
Sbjct: 623 RSFRELASRVGEQYAHALE------DPLPPELRRRLELMGLPDALRFIHFPP--EDADLE 674
Query: 447 --------ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWS 498
A +RL FDE F+LQLG L+ G + E+ D ++ A++E
Sbjct: 675 ALDAHQSPAHRRLAFDELFFLQLG---MALKRQGIKAEQGISFD------VSPAFLE--- 722
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
K ALP+ LT +Q + E+ D+ + PMNRL+QGDVG GKT VA ++ + +
Sbjct: 723 ----KARTALPFQLTGAQARVVEELSRDMARAEPMNRLVQGDVGSGKTAVAMVSALVALQ 778
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+GYQ A M PTE+LA QH + K+L + ++ L++ S K R +R + G
Sbjct: 779 NGYQVAVMAPTEILAEQHERNFRKVLGPLGF-----QVGLVSASGTAKAKRQVRDAVARG 833
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
DI L +GTH+LI +++ F L L ++DEQ RFGV+QR +T MS G
Sbjct: 834 DIHLAVGTHALIQQEIAFDRLGLVVIDEQHRFGVLQR--------HTLMSKG-------- 877
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYE 738
+ P VL M+ATPIPRTLA+ LYGD+ L+ I LPPGR PI T + N+K
Sbjct: 878 -------LKPDVLVMTATPIPRTLAMTLYGDLDLSIIDQLPPGRTPINTRVF--NDKQRA 928
Query: 739 NVYK 742
VY+
Sbjct: 929 RVYE 932
>gi|422728475|ref|ZP_16784892.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0012]
gi|315151044|gb|EFT95060.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0012]
Length = 678
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 254/527 (48%), Gaps = 94/527 (17%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIIS 268
+S +PG+ + L+ G T+ LL ++P Y D+Q + ++ D + G ++S
Sbjct: 6 LVSVLPGVGPKRAENLQELGIVTIEDLLTYYPFRYDDIQEKDLSEIQDQEKVTLKGLVVS 65
Query: 269 SRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ + G S L + E A V+N+ F +
Sbjct: 66 EAVVSRYGYKKSRLTFRMMQEHA---------VINVS-------------------FFNQ 97
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLK-DEDDLSLRAKGRPYPIY 386
PFLK K + E + V GK A R + + I K D +D + PIY
Sbjct: 98 PFLKD---KVVLSEEIAVYGKWDAKRKS----LNGMKILASKGDNEDFA--------PIY 142
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
+ S L I A + + + + P ++ +++ L+ +A +H P + +E+
Sbjct: 143 HVNKKVRQSTLVQLIRTAFEEYGSLIEEILPNDLLEKYRLMPRKEAMWAMHFPSNPEESH 202
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
A++R++F+EFF QL ++GL Q EK GL +Y RL K
Sbjct: 203 QAKRRVVFEEFFLFQLK-----MQGLKKQEKAEKNGLAIQYDVDRL------------KT 245
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
+ LP+ LT +Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G+Q
Sbjct: 246 FTQGLPFELTGAQKKVTNEICRDLRSPKHMQRLLQGDVGSGKTVVAAIALYATMTAGFQG 305
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A MVPTE+LA QH E L +L D +E + ALLTGST K+ R+I ++L G+I +V
Sbjct: 306 ALMVPTEILAQQHMESLQQLFDPLE-----VRTALLTGSTKTKERRLILEELANGEIDIV 360
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GTH+LI + V F L L I DEQ RFGV QR K
Sbjct: 361 VGTHALIQQDVSFHQLGLVITDEQHRFGVNQRKILREK---------------------- 398
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+ P VL M+ATPIPRTLA+ YG+M ++ I ++P GRIPI+T I
Sbjct: 399 -GLKPDVLFMTATPIPRTLAITAYGEMDVSIIDEMPAGRIPIETRWI 444
>gi|307288878|ref|ZP_07568851.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0109]
gi|422704084|ref|ZP_16761899.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX1302]
gi|306500150|gb|EFM69494.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0109]
gi|315164405|gb|EFU08422.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX1302]
Length = 678
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 254/527 (48%), Gaps = 94/527 (17%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIIS 268
+S +PG+ + L+ G T+ LL ++P Y D+Q + ++ D + G ++S
Sbjct: 6 LVSVLPGVGPKRAENLQELGIVTIEDLLTYYPFRYDDIQEKDLSEIQDQEKVTLKGLVVS 65
Query: 269 SRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ + G S L + E A V+N+ F +
Sbjct: 66 EAVVSRYGYKKSRLTFRMMQEHA---------VINVS-------------------FFNQ 97
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLK-DEDDLSLRAKGRPYPIY 386
PFLK K + E + V GK A R + + I K D +D + PIY
Sbjct: 98 PFLKD---KVVLSEEIAVYGKWDAKRKS----LNGMKILASKGDNEDFA--------PIY 142
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
+ S L I A + + + + P ++ +++ L+ +A +H P + +E+
Sbjct: 143 HVNKKVRQSTLVQLIRTAFEEYGSLIEEILPNDLLEKYRLMPRKEAMWAMHFPSNPEESH 202
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
A++R++F+EFF QL ++GL Q EK GL +Y RL K
Sbjct: 203 QAKRRVVFEEFFLFQLK-----MQGLKKQEKAEKNGLAIQYDVDRL------------KT 245
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
+ LP+ LT +Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G+Q
Sbjct: 246 FTQGLPFELTGAQKKVTNEICRDLRSPKHMQRLLQGDVGSGKTVVAAIALYATMTAGFQG 305
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A MVPTE+LA QH E L +L D +E + ALLTGST K+ R+I ++L G+I +V
Sbjct: 306 ALMVPTEILAQQHMESLQQLFDPLE-----VRTALLTGSTKTKERRLILEELANGEIDIV 360
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GTH+LI + V F L L I DEQ RFGV QR K
Sbjct: 361 VGTHALIQQDVSFHQLGLVITDEQHRFGVNQRKILREK---------------------- 398
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+ P VL M+ATPIPRTLA+ YG+M ++ I ++P GRIPI+T I
Sbjct: 399 -GLKPDVLFMTATPIPRTLAITAYGEMDVSIIDEMPAGRIPIETRWI 444
>gi|344995898|ref|YP_004798241.1| ATP-dependent DNA helicase RecG [Caldicellulosiruptor lactoaceticus
6A]
gi|343964117|gb|AEM73264.1| ATP-dependent DNA helicase RecG [Caldicellulosiruptor lactoaceticus
6A]
Length = 679
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 175/538 (32%), Positives = 254/538 (47%), Gaps = 103/538 (19%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFI 263
+L+K I + G+ + + G LL H PR Y D + +L DG+ F+
Sbjct: 3 VLEKDIRFLKGVGENREKLFKKLGIKKAEDLLWHIPRKYLDYSRLKKIRELCDGEIESFV 62
Query: 264 GEI------ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK 317
++ I +R +K ++ + D+ N D
Sbjct: 63 AKVAGKPVEIETRSVK----------VIKIPVEDSTGVVTTVWFNQD------------- 99
Query: 318 FFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDE---DDL 374
++K++ K GE C SGK+ E + + I+V E D
Sbjct: 100 -----------YIKNV---LKEGEIFCFSGKI---------ERKGFYIEVKNPEFEKYDQ 136
Query: 375 SLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYM 433
L GR P+Y S GL+ ++R+ + L + D +P I Q++ L + A
Sbjct: 137 QLLHTGRIVPVYNSTEGLSQKVIRNIVNNLLHQVDGMLIDIIPPYIRQKYNLSDINFAIK 196
Query: 434 GIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAY 493
IH P++ +LARKRL+F+EF YL L + E + + EG+
Sbjct: 197 NIHFPENKLSLELARKRLVFEEF-YLFQLSLLLLKENIE---KNEGI------------K 240
Query: 494 MEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLAC 553
+E S K+ + LP+ LT +Q ++EI DL+ MNRL+QGDVGCGKTVVA +
Sbjct: 241 IENAQSSLKEFEKLLPFELTEAQKRVLAEIAQDLESTKQMNRLIQGDVGCGKTVVALASA 300
Query: 554 MEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRK 613
I +GYQ A M PTE+LA QHY K N K + LL GSTP K+ +I K
Sbjct: 301 YATIKAGYQVALMAPTEVLALQHYNECKKYFGN------KFNVRLLIGSTPKKEKEIILK 354
Query: 614 DLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAM 673
+L+ G +VIGTH+LI ++V+F L LAI DEQ RFGV+QR K
Sbjct: 355 ELEHGLCKMVIGTHALIQDEVKFKNLGLAITDEQHRFGVIQRVELTKK------------ 402
Query: 674 VNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
GS +P++L M+ATPIPRTL+L LYGD+ ++ I LPPGR I TY ++
Sbjct: 403 ----GS-------SPNILVMTATPIPRTLSLVLYGDLDISIIDQLPPGRKKILTYAVD 449
>gi|418035113|ref|ZP_12673572.1| Hydrolase acting on acid anhydrides in phosphorous-containing
anhydrides [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1519]
gi|354691051|gb|EHE90991.1| Hydrolase acting on acid anhydrides in phosphorous-containing
anhydrides [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1519]
Length = 679
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 170/528 (32%), Positives = 263/528 (49%), Gaps = 99/528 (18%)
Query: 209 KCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGEII 267
+ ++ + G+ + L++ G Y++ LL +FP Y +L+N +D L+DGQ + G I+
Sbjct: 9 RPVTALKGVGAKTAEALQSLGIYSIYDLLFYFPYRYDELENLPLDQLEDGQKVMLKG-IV 67
Query: 268 SSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
++ + + V I +++ ++ F +
Sbjct: 68 ATNPYQNYFGYHKSRVSFKLRI-------DHDIIMVN-------------------FFNQ 101
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMRE-----YNIDVLKDEDDLSLRAKGRP 382
P+L + VG+ + V GK Y++R+ Y + K+ DD G
Sbjct: 102 PWLTK---QLSVGQEIAVYGK---------YDLRKQSLSAYKLLANKNSDD------GMA 143
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
PIY + L+ I A+ +++ + VP+++ + + L+ D + +H PK +
Sbjct: 144 -PIYSINRQIKQKKLQTMIDLAIAESMDEMGNAVPEDLRKHYRLMADQDLVIAMHHPKDL 202
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWS-SL 500
EA AR+ +F EFF L+QM L + K ++ Y + +
Sbjct: 203 AEAKEARRSAVFREFF------LFQMQLALMSSQNKS-----------HSGYAKHYDLEE 245
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
KL ++LP++L+ Q I+EI D+ M RLLQGDVG GKTVVA A + +G
Sbjct: 246 IGKLTKSLPFALSPDQKKVINEIFADMFVDQQMQRLLQGDVGSGKTVVAVFAIYGAVTAG 305
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQAA MVPTE+LA QHY + +L++ ++ALLTGST + R I K+L G I
Sbjct: 306 YQAALMVPTEILANQHYHKISAMLEDF-----GVRVALLTGSTKTMERREIYKELADGSI 360
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+LI E+V F L L I+DEQ RFGVVQR +A++N
Sbjct: 361 NVVIGTHALIQEQVAFKKLGLVIIDEQHRFGVVQR---------------LALIN----- 400
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTY 728
K D P +LAM+ATPIPR+LAL +YGD +L++I LP GR PIK+Y
Sbjct: 401 KGDW---PDILAMTATPIPRSLALTVYGDTALSEIRHLPAGRKPIKSY 445
>gi|148269855|ref|YP_001244315.1| ATP-dependent DNA helicase RecG [Thermotoga petrophila RKU-1]
gi|147735399|gb|ABQ46739.1| ATP-dependent DNA helicase RecG [Thermotoga petrophila RKU-1]
Length = 779
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 176/522 (33%), Positives = 260/522 (49%), Gaps = 81/522 (15%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
I G+ +L+ G TLR LL FPR Y D + L+D + GE ++++
Sbjct: 116 IQYAKGVGPNRKKKLKKLGIETLRDLLEFFPRDYEDRRKI-FKLND----LLPGEKVTTQ 170
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLH-LKKFFRGTRFTSIPF 329
G IV E T + +NI + +H L K+F + +
Sbjct: 171 GK-----------IVSVE------TKRFQNMNILTAVLSDGLVHVLLKWFNQEYLQT--Y 211
Query: 330 LKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSK 389
LK + GK V V+G V++ YE+ +N +V E + + R PIY
Sbjct: 212 LKQLTGKE-----VFVTGTVKSNAYTGQYEI--HNAEVTPKEGEYARRI----LPIYRLT 260
Query: 390 GGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLAR 448
G++ +R + +L + + +P+ I ++ LL + DAY G+H PK + AR
Sbjct: 261 SGISQKQMRKIFEENIPSLCCSLKETLPERILEKRKLLGVKDAYYGMHFPKTFYHLEKAR 320
Query: 449 KRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRAL 508
+RL ++E F LQL + + + EK G + K +EG L ++ +++L
Sbjct: 321 ERLAYEELFVLQLA-----FQKIRKEREKHGGIPKK---------IEG--KLAEEFIKSL 364
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
P+ LT+SQ A EI D+ PMNRLLQGDVG GKTVVA LA ++ +G+Q AFMVP
Sbjct: 365 PFKLTNSQKRAHQEIRNDMISEKPMNRLLQGDVGSGKTVVAQLAILDNYEAGFQTAFMVP 424
Query: 569 TELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHS 628
T +LA QHY ++ K +ALL G+T + I+ L+ G I +VIGTH+
Sbjct: 425 TSILAIQHYRRTIESF-----SKFNIHVALLIGATTPSEKEKIKSGLRNGQIDVVIGTHA 479
Query: 629 LIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAP 688
LI E V F L L I+DEQ RFGV QR M+ G MV++
Sbjct: 480 LIQEDVHFKNLGLVIIDEQHRFGVKQREAL--------MNKG-KMVDT------------ 518
Query: 689 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
L MSATPIPR++ALA YGD+ +T I ++PPGR ++T ++
Sbjct: 519 --LVMSATPIPRSMALAFYGDLDVTVIDEMPPGRKEVQTMLV 558
>gi|422698503|ref|ZP_16756395.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX1346]
gi|315172952|gb|EFU16969.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX1346]
Length = 678
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 254/527 (48%), Gaps = 94/527 (17%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIIS 268
+S +PG+ + L+ G T+ LL ++P Y D+Q + ++ D + G ++S
Sbjct: 6 LVSVLPGVGPKRAENLQELGIATIEDLLTYYPFRYDDIQEKDLSEIQDQEKVTLKGLVVS 65
Query: 269 SRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ + G S L + E A V+N+ F +
Sbjct: 66 EAVVSRYGYKKSRLTFRMMQEHA---------VINVS-------------------FFNQ 97
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLK-DEDDLSLRAKGRPYPIY 386
PFLK K + E + V GK A R + + I K D +D + PIY
Sbjct: 98 PFLKD---KVVLSEEIAVYGKWDAKRKS----LNGMKILASKGDNEDFA--------PIY 142
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
+ S L I A + + + + P ++ +++ L+ +A +H P + +E+
Sbjct: 143 HVNKKVRQSTLVQLIRTAFEEYGSLIEEILPNDLLEKYRLMPRKEAMWAMHFPSNPEESH 202
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
A++R++F+EFF QL ++GL Q EK GL +Y RL K
Sbjct: 203 QAKRRVVFEEFFLFQLK-----MQGLKKQEKAEKNGLAIQYDVDRL------------KT 245
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
+ LP+ LT +Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G+Q
Sbjct: 246 FTQGLPFELTGAQKKVTNEICRDLRSPKHMQRLLQGDVGSGKTVVAAIALYATMTAGFQG 305
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A MVPTE+LA QH E L +L D +E + ALLTGST K+ R+I ++L G+I +V
Sbjct: 306 ALMVPTEILAQQHMESLQQLFDPLE-----VRTALLTGSTKTKERRLILEELANGEIDIV 360
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GTH+LI + V F L L I DEQ RFGV QR K
Sbjct: 361 VGTHALIQQDVSFHQLGLVITDEQHRFGVNQRKILREK---------------------- 398
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+ P VL M+ATPIPRTLA+ YG+M ++ I ++P GRIPI+T I
Sbjct: 399 -GLKPDVLFMTATPIPRTLAITAYGEMDVSIIDEMPAGRIPIETRWI 444
>gi|256958386|ref|ZP_05562557.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis DS5]
gi|257078303|ref|ZP_05572664.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis JH1]
gi|294780233|ref|ZP_06745605.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis PC1.1]
gi|307270576|ref|ZP_07551874.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX4248]
gi|397701254|ref|YP_006539042.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis D32]
gi|422711145|ref|ZP_16768078.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0027]
gi|422868355|ref|ZP_16914898.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX1467]
gi|256948882|gb|EEU65514.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis DS5]
gi|256986333|gb|EEU73635.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis JH1]
gi|294452776|gb|EFG21206.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis PC1.1]
gi|306513157|gb|EFM81791.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX4248]
gi|315034810|gb|EFT46742.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0027]
gi|329575686|gb|EGG57213.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX1467]
gi|397337893|gb|AFO45565.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis D32]
Length = 678
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 254/527 (48%), Gaps = 94/527 (17%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIIS 268
+S +PG+ + L+ G T+ LL ++P Y D+Q + ++ D + G ++S
Sbjct: 6 LVSVLPGVGPKRAENLQELGIATIEDLLTYYPFRYDDIQEKDLSEIQDQEKVTLKGLVVS 65
Query: 269 SRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ + G S L + E A V+N+ F +
Sbjct: 66 EAVVSRYGYKKSRLTFRMMQEHA---------VINVS-------------------FFNQ 97
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLK-DEDDLSLRAKGRPYPIY 386
PFLK K + E + V GK A R + + I K D +D + PIY
Sbjct: 98 PFLKD---KVVLSEEIAVYGKWDAKRKS----LNGMKILASKGDNEDFA--------PIY 142
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
+ S L I A + + + + P ++ +++ L+ +A +H P + +E+
Sbjct: 143 HVNKKVRQSTLVQLIRTAFEEYGSLIEEILPNDLLEKYRLMPRKEAMWAMHFPSNPEESH 202
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
A++R++F+EFF QL ++GL Q EK GL +Y RL K
Sbjct: 203 QAKRRVVFEEFFLFQLK-----MQGLKKQEKAEKNGLAVQYDVDRL------------KT 245
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
+ LP+ LT +Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G+Q
Sbjct: 246 FTQGLPFELTGAQKKVTNEICRDLRSPKHMQRLLQGDVGSGKTVVAAIALYATMTAGFQG 305
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A MVPTE+LA QH E L +L D +E + ALLTGST K+ R+I ++L G+I +V
Sbjct: 306 ALMVPTEILAQQHMESLQQLFDPLE-----VRTALLTGSTKTKERRLILEELANGEIDIV 360
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GTH+LI + V F L L I DEQ RFGV QR K
Sbjct: 361 VGTHALIQQDVSFHQLGLVITDEQHRFGVNQRKILREK---------------------- 398
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+ P VL M+ATPIPRTLA+ YG+M ++ I ++P GRIPI+T I
Sbjct: 399 -GLKPDVLFMTATPIPRTLAITAYGEMDVSIIDEMPAGRIPIETRWI 444
>gi|293389090|ref|ZP_06633562.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis S613]
gi|291081558|gb|EFE18521.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis S613]
Length = 678
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 254/527 (48%), Gaps = 94/527 (17%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIIS 268
+S +PG+ + L+ G T+ LL ++P Y D+Q + ++ D + G ++S
Sbjct: 6 LVSVLPGVGPKRAENLQELGIATIEDLLTYYPFRYDDIQEKDLSEIQDQEKVTLKGLVVS 65
Query: 269 SRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ + G S L + E A V+N+ F +
Sbjct: 66 EAVVSRYGYKKSRLTFRMMQEHA---------VINVS-------------------FFNQ 97
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLK-DEDDLSLRAKGRPYPIY 386
PFLK K + E + V GK A R + + I K D +D + PIY
Sbjct: 98 PFLKD---KVVLSEEIAVYGKWDAKRKS----LNGMKILASKGDNEDFA--------PIY 142
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
+ S L I A + + + + P ++ +++ L+ +A +H P + +E+
Sbjct: 143 HVNKKVRQSTLVQLIRTAFEEYGSLVEEILPNDLLEKYRLMPRKEAMWAMHFPSNPEESH 202
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
A++R++F+EFF QL ++GL Q EK GL +Y RL K
Sbjct: 203 QAKRRVVFEEFFLFQLK-----MQGLKKQEKAEKNGLAIQYDVERL------------KT 245
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
+ LP+ LT +Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G+Q
Sbjct: 246 FTQGLPFELTGAQKKVTNEICRDLRSPKHMQRLLQGDVGSGKTVVAAIALYATMTAGFQG 305
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A MVPTE+LA QH E L +L D +E + ALLTGST K+ R+I ++L G+I +V
Sbjct: 306 ALMVPTEILAQQHMESLQQLFDPLE-----VRTALLTGSTKTKERRLILEELANGEIDIV 360
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GTH+LI + V F L L I DEQ RFGV QR K
Sbjct: 361 VGTHALIQQDVSFHQLGLVITDEQHRFGVNQRKILREK---------------------- 398
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+ P VL M+ATPIPRTLA+ YG+M ++ I ++P GRIPI+T I
Sbjct: 399 -GLKPDVLFMTATPIPRTLAITAYGEMDVSIIDEMPAGRIPIETRWI 444
>gi|256960459|ref|ZP_05564630.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis Merz96]
gi|293385117|ref|ZP_06630943.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis R712]
gi|312906699|ref|ZP_07765699.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis DAPTO 512]
gi|312910839|ref|ZP_07769675.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis DAPTO 516]
gi|256950955|gb|EEU67587.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis Merz96]
gi|291077594|gb|EFE14958.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis R712]
gi|310627347|gb|EFQ10630.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis DAPTO 512]
gi|311288862|gb|EFQ67418.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis DAPTO 516]
Length = 678
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 254/527 (48%), Gaps = 94/527 (17%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIIS 268
+S +PG+ + L+ G T+ LL ++P Y D+Q + ++ D + G ++S
Sbjct: 6 LVSVLPGVGPKRAENLQELGIATIEDLLTYYPFRYDDIQEKDLSEIQDQEKVTLKGLVVS 65
Query: 269 SRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ + G S L + E A V+N+ F +
Sbjct: 66 EAVVSRYGYKKSRLTFRMMQEHA---------VINVS-------------------FFNQ 97
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLK-DEDDLSLRAKGRPYPIY 386
PFLK K + E + V GK A R + + I K D +D + PIY
Sbjct: 98 PFLKD---KVVLSEEIAVYGKWDAKRKS----LNGMKILASKGDNEDFA--------PIY 142
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
+ S L I A + + + + P ++ +++ L+ +A +H P + +E+
Sbjct: 143 HVNKKVRQSTLVQLIRTAFEEYGSLVEEILPNDLLEKYRLMPRKEAMWAMHFPSNPEESH 202
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
A++R++F+EFF QL ++GL Q EK GL +Y RL K
Sbjct: 203 QAKRRVVFEEFFLFQLK-----MQGLKKQEKAEKNGLAIQYDVERL------------KT 245
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
+ LP+ LT +Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G+Q
Sbjct: 246 FTQGLPFELTGAQKKVTNEICRDLRSPKHMQRLLQGDVGSGKTVVAAIALYATMTAGFQG 305
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A MVPTE+LA QH E L +L D +E + ALLTGST K+ R+I ++L G+I +V
Sbjct: 306 ALMVPTEILAQQHMESLQQLFDPLE-----VRTALLTGSTKTKERRLILEELANGEIDIV 360
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GTH+LI + V F L L I DEQ RFGV QR K
Sbjct: 361 VGTHALIQQDVSFHQLGLVITDEQHRFGVNQRKILREK---------------------- 398
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+ P VL M+ATPIPRTLA+ YG+M ++ I ++P GRIPI+T I
Sbjct: 399 -GLKPDVLFMTATPIPRTLAITAYGEMDVSIIDEMPAGRIPIETRWI 444
>gi|229548042|ref|ZP_04436767.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ATCC 29200]
gi|257080492|ref|ZP_05574853.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis E1Sol]
gi|257091345|ref|ZP_05585706.1| ATP-dependent DNA helicase recG [Enterococcus faecalis CH188]
gi|312905408|ref|ZP_07764522.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0635]
gi|422689970|ref|ZP_16748060.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0630]
gi|422732827|ref|ZP_16789156.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0645]
gi|229306831|gb|EEN72827.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ATCC 29200]
gi|256988522|gb|EEU75824.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis E1Sol]
gi|257000157|gb|EEU86677.1| ATP-dependent DNA helicase recG [Enterococcus faecalis CH188]
gi|310631137|gb|EFQ14420.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0635]
gi|315161222|gb|EFU05239.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0645]
gi|315577138|gb|EFU89329.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0630]
Length = 678
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 254/527 (48%), Gaps = 94/527 (17%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIIS 268
+S +PG+ + L+ G T+ LL ++P Y D+Q + ++ D + G ++S
Sbjct: 6 LVSVLPGVGPKRAENLQELGIATIEDLLTYYPFRYDDIQEKDLSEIQDQEKVTLKGLVVS 65
Query: 269 SRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ + G S L + E A V+N+ F +
Sbjct: 66 EAVVSRYGYKKSRLTFRMMQEHA---------VINVS-------------------FFNQ 97
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLK-DEDDLSLRAKGRPYPIY 386
PFLK K + E + V GK A R + + I K D +D + PIY
Sbjct: 98 PFLKD---KVVLSEEIAVYGKWDAKRKS----LNGMKILASKGDNEDFA--------PIY 142
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
+ S L I A + + + + P ++ +++ L+ +A +H P + +E+
Sbjct: 143 HVNKKVRQSTLVQLIRTAFEEYGSLIEEILPNDLLEKYRLMPRKEAMWAMHFPSNPEESH 202
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
A++R++F+EFF QL ++GL Q EK GL +Y RL K
Sbjct: 203 QAKRRVVFEEFFLFQLK-----MQGLKKQEKAEKNGLAIQYDVDRL------------KT 245
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
+ LP+ LT +Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G+Q
Sbjct: 246 FTQGLPFELTGAQKKVTNEICRDLRSPKHMQRLLQGDVGSGKTVVAAIALYATMTAGFQG 305
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A MVPTE+LA QH E L +L D +E + ALLTGST K+ R+I ++L G+I +V
Sbjct: 306 ALMVPTEILAQQHMESLQQLFDPLE-----VRTALLTGSTKTKERRLILEELANGEIDIV 360
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GTH+LI + V F L L I DEQ RFGV QR K
Sbjct: 361 VGTHALIQQDVSFHQLGLVITDEQHRFGVNQRKILREK---------------------- 398
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+ P VL M+ATPIPRTLA+ YG+M ++ I ++P GRIPI+T I
Sbjct: 399 -GLKPDVLFMTATPIPRTLAITAYGEMDVSIIDEMPAGRIPIETRWI 444
>gi|424674091|ref|ZP_18111017.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis 599]
gi|402352035|gb|EJU86900.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis 599]
Length = 678
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 254/527 (48%), Gaps = 94/527 (17%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIIS 268
+S +PG+ + L+ G T+ LL ++P Y D+Q + ++ D + G ++S
Sbjct: 6 LVSVLPGVGPKRAENLQELGIATIEDLLTYYPFRYDDIQEKDLSEIQDQEKVTLKGLVVS 65
Query: 269 SRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ + G S L + E A V+N+ F +
Sbjct: 66 EAVVSRYGYKKSRLTFRMMQEHA---------VINVS-------------------FFNQ 97
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLK-DEDDLSLRAKGRPYPIY 386
PFLK K + E + V GK A R + + I K D +D + PIY
Sbjct: 98 PFLKD---KVVLSEEIAVYGKWDAKRKS----LNGMKILASKGDNEDFA--------PIY 142
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
+ S L I A + + + + P ++ +++ L+ +A +H P + +E+
Sbjct: 143 HVNKKVRQSTLVQLIRTAFEEYGSLIEEILPNDLLEKYRLMPRKEAMWAMHFPSNPEESH 202
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
A++R++F+EFF QL ++GL Q EK GL +Y RL K
Sbjct: 203 QAKRRVVFEEFFLFQLK-----MQGLKKQEKAEKNGLAIQYDVDRL------------KT 245
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
+ LP+ LT +Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G+Q
Sbjct: 246 FTQGLPFELTGAQKKVTNEICRDLRSPKHMQRLLQGDVGSGKTVVAAIALYATMTAGFQG 305
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A MVPTE+LA QH E L +L D +E + ALLTGST K+ R+I ++L G+I +V
Sbjct: 306 ALMVPTEILAQQHMESLQQLFDPLE-----VRTALLTGSTKTKERRLILEELANGEIDIV 360
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GTH+LI + V F L L I DEQ RFGV QR K
Sbjct: 361 VGTHALIQQDVSFHQLGLVITDEQHRFGVNQRKILREK---------------------- 398
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+ P VL M+ATPIPRTLA+ YG+M ++ I ++P GRIPI+T I
Sbjct: 399 -GLKPDVLFMTATPIPRTLAITAYGEMDVSIIDEMPAGRIPIETRWI 444
>gi|363890893|ref|ZP_09318187.1| ATP-dependent DNA helicase RecG [Eubacteriaceae bacterium CM5]
gi|361962660|gb|EHL15769.1| ATP-dependent DNA helicase RecG [Eubacteriaceae bacterium CM5]
Length = 672
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 161/533 (30%), Positives = 261/533 (48%), Gaps = 105/533 (19%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L+ + +P + ++ L+N G T+ LLH+FPR Y +D F + EI
Sbjct: 3 LNDNVINLPKIGEKKQKVLQNMGVSTIYDLLHYFPRKY----------EDRSIFKKLNEI 52
Query: 267 ISSR--GMKAG------CSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKF 318
+ +KA + F + I+ ++D +T+ ++ N
Sbjct: 53 KAKEKASVKAKIIRFEKVNLKFKKSIINIYVSDDTSTACIKLFN---------------- 96
Query: 319 FRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRA 378
F +P L+ G ++ G ++ +Y++ ++N + E D + +
Sbjct: 97 ---NNFI-LPELEK-------GRYIFFYG-----QAEENYDLLQFNSPEI--EFDKAEKK 138
Query: 379 KGRPYPIYPSKGGLNASLLRDTIARALQ-ALPANFDPVPKEITQEFGLLCLFDAYMGIHQ 437
G YPIYP G+ S + T+ +++ A + + +P E +++ L+ +DA IH
Sbjct: 139 IGMIYPIYPLSNGIKNSEILSTVKYSIENADMTSLEYLPNEYLEKYRLIPTYDAIKNIHM 198
Query: 438 PKHIDEADLARKRLIFDEFFYLQL---GRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYM 494
PK+I+ +R R IF+EFF L + + + + +G +F+K
Sbjct: 199 PKNINILKQSRYRCIFNEFFELNIFLNAQKSNVQKSVGIKFKKS---------------- 242
Query: 495 EGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACM 554
E + + KKL P+ LT++Q + +I D+ + VPM RL+QGDVG GKT+VAFL+
Sbjct: 243 ENINDIIKKL----PFELTNAQKKVLDDIFSDMNKDVPMRRLIQGDVGSGKTIVAFLSIY 298
Query: 555 EVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKD 614
+GYQ+AFMVPTE+LA QHYE+ L N + K+ LL GST K + ++
Sbjct: 299 NSCMNGYQSAFMVPTEVLAVQHYENALDFFKNTD-----IKVKLLIGST--KNKAKLYEE 351
Query: 615 LQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMV 674
++ G++ +VIGT +LI EKV F L L I DEQ RFGV QR + K
Sbjct: 352 IENGEVDVVIGTQALIQEKVVFKNLGLVITDEQHRFGVNQRKKLEEK------------- 398
Query: 675 NSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ P ++ MSATPIPRTL+L ++ D+ ++ I +LP R+PIKT
Sbjct: 399 ---------SNANPDIIVMSATPIPRTLSLVIHKDLDVSVIGELPQNRLPIKT 442
>gi|255970699|ref|ZP_05421285.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis T1]
gi|312953204|ref|ZP_07772050.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0102]
gi|384516904|ref|YP_005704209.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis 62]
gi|422692414|ref|ZP_16750435.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0031]
gi|422725688|ref|ZP_16782146.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0312]
gi|255961717|gb|EET94193.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis T1]
gi|310628821|gb|EFQ12104.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0102]
gi|315152773|gb|EFT96789.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0031]
gi|315159392|gb|EFU03409.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0312]
gi|323479037|gb|ADX78476.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis 62]
Length = 678
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 254/527 (48%), Gaps = 94/527 (17%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIIS 268
+S +PG+ + L+ G T+ LL ++P Y D+Q + ++ D + G ++S
Sbjct: 6 LVSVLPGVGPKRAENLQELGIATIEDLLTYYPFRYDDIQEKDLSEIQDQEKVTLKGLVVS 65
Query: 269 SRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ + G S L + E A V+N+ F +
Sbjct: 66 EAVVSRYGYKKSRLTFRMMQEHA---------VINVS-------------------FFNQ 97
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLK-DEDDLSLRAKGRPYPIY 386
PFLK K + E + V GK A R + + I K D +D + PIY
Sbjct: 98 PFLKD---KVVLSEEIAVYGKWDAKRKS----LNGMKILASKGDNEDFA--------PIY 142
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
+ S L I A + + + + P ++ +++ L+ +A +H P + +E+
Sbjct: 143 HVNKKVRQSTLVQLIRTAFEEYGSLVEEILPNDLLEKYRLMPRKEAMWAMHFPSNPEESH 202
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
A++R++F+EFF QL ++GL Q EK GL +Y RL K
Sbjct: 203 QAKRRVVFEEFFLFQLK-----MQGLKKQEKAEKNGLAIQYDVDRL------------KT 245
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
+ LP+ LT +Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G+Q
Sbjct: 246 FTQGLPFELTGAQKKVTNEICRDLRSPKHMQRLLQGDVGSGKTVVAAIALYATMTAGFQG 305
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A MVPTE+LA QH E L +L D +E + ALLTGST K+ R+I ++L G+I +V
Sbjct: 306 ALMVPTEILAQQHMESLQQLFDPLE-----VRTALLTGSTKTKERRLILEELANGEIDIV 360
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GTH+LI + V F L L I DEQ RFGV QR K
Sbjct: 361 VGTHALIQQDVSFHQLGLVITDEQHRFGVNQRKILREK---------------------- 398
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+ P VL M+ATPIPRTLA+ YG+M ++ I ++P GRIPI+T I
Sbjct: 399 -GLKPDVLFMTATPIPRTLAITAYGEMDVSIIDEMPAGRIPIETRWI 444
>gi|424759053|ref|ZP_18186726.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis R508]
gi|402405229|gb|EJV37827.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis R508]
Length = 678
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 254/527 (48%), Gaps = 94/527 (17%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIIS 268
+S +PG+ + L+ G T+ LL ++P Y D+Q + ++ D + G ++S
Sbjct: 6 LVSVLPGVGPKRAENLQELGIATIEDLLTYYPFRYDDIQEKDLSEIQDQEKVTLKGLVVS 65
Query: 269 SRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ + G S L + E A V+N+ F +
Sbjct: 66 EAVVSRYGYKKSRLTFRMMQEHA---------VINVS-------------------FFNQ 97
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLK-DEDDLSLRAKGRPYPIY 386
PFLK K + E + V GK A R + + I K D +D + PIY
Sbjct: 98 PFLKD---KVVLSEEIAVYGKWDAKRKS----LNGMKILASKGDNEDFA--------PIY 142
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
+ S L I A + + + + P ++ +++ L+ +A +H P + +E+
Sbjct: 143 HVNKKVRQSTLVQLIRTAFEEYGSLIEEILPNDLLEKYRLMPRKEAMWAMHFPSNPEESH 202
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
A++R++F+EFF QL ++GL Q EK GL +Y RL K
Sbjct: 203 QAKRRVVFEEFFLFQLK-----MQGLKKQEKAEKNGLAIQYDVDRL------------KT 245
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
+ LP+ LT +Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G+Q
Sbjct: 246 FTQGLPFELTGAQKKVTNEICRDLRSPKHMQRLLQGDVGSGKTVVAAIALYATMTAGFQG 305
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A MVPTE+LA QH E L +L D +E + ALLTGST K+ R+I ++L G+I +V
Sbjct: 306 ALMVPTEILAQQHMESLQQLFDPLE-----VRTALLTGSTKTKERRLILEELANGEIDIV 360
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GTH+LI + V F L L I DEQ RFGV QR K
Sbjct: 361 VGTHALIQQDVSFHQLGLVITDEQHRFGVNQRKILREK---------------------- 398
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+ P VL M+ATPIPRTLA+ YG+M ++ I ++P GRIPI+T I
Sbjct: 399 -GLKPDVLFMTATPIPRTLAITAYGEMDVSIIDEMPAGRIPIETRWI 444
>gi|374312841|ref|YP_005059271.1| ATP-dependent DNA helicase RecG [Granulicella mallensis MP5ACTX8]
gi|358754851|gb|AEU38241.1| ATP-dependent DNA helicase RecG [Granulicella mallensis MP5ACTX8]
Length = 818
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 196/581 (33%), Positives = 280/581 (48%), Gaps = 103/581 (17%)
Query: 196 SLPSEASIEPL---LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ- 251
S+ + A+IEP+ L + + + R+ L G T+ LL+H P Y D + +
Sbjct: 7 SIAATATIEPVPLELTTPVKYIKRIGDRVAANLAERGVETVEDLLYHLPFRYEDRLHPKP 66
Query: 252 -IDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEI--ADTETTSGDEVVNIDSGQK 308
G +GE+ + ++ + F E+ VG + AD+E + +
Sbjct: 67 LSGYHPGDMASLVGEVRGTVLLRTRSAPIF-EMTVGIKPPPADSEAAMSGLL------RP 119
Query: 309 KKIYLHLKK--FFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNN---------H 357
L K +F GT +L+ K + G+ + + GK+ RS N
Sbjct: 120 PPAVLETVKCMWFHGT------YLRD---KFRPGQMIALYGKLEGSRSGNALNAVPGATQ 170
Query: 358 YEMREYNIDVLKD-----ED-DLSLRAKGRPYPIYPSKGG-------LNASLLRD---TI 401
++M + ++L D ED + ++ GR P+Y S GG L + LR T+
Sbjct: 171 FKMIQPTFEILPDASATGEDAEFTMLEMGRIVPVYESLGGKTPWGAKLTSRWLRRVMWTV 230
Query: 402 ARALQALPANFD-PVPKEITQEFGLLCLFDAYMGIHQPKH---IDEADLAR----KRLIF 453
R L D +P+ + Q GL +A +H P I E AR +RLIF
Sbjct: 231 FRELTESDTKADETLPQALRQRLGLPGRMEALQALHFPPAGTPITELMSARTPAHRRLIF 290
Query: 454 DEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLR-----AL 508
+EF+YL+LG L K RK R A G + LT + +R L
Sbjct: 291 EEFWYLELG-----------------LELKRRKLRTRA----GTAFLTDEKVREALKQVL 329
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
P+ TS+Q + EI+ D++ PM RLLQGDVG GKT+VA A + I +GYQAA M P
Sbjct: 330 PFKPTSAQKRVLGEIVTDMRASRPMRRLLQGDVGSGKTIVALQAALVAIENGYQAAMMAP 389
Query: 569 TELLATQHYEHLLKLL-DNMEEDKHKP-KIALLTGSTPVKQSRMIRKDLQTGDITLVIGT 626
TE+LATQHY KLL D + +P ++ALLTGS + R +R + G+ L IGT
Sbjct: 390 TEILATQHYLSARKLLADAISPHTGRPYRVALLTGSLDERAKRDVRGRIFRGETDLAIGT 449
Query: 627 HSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHM 686
H+L+ EKV+F L L IVDEQ RFGV QR KL ++G+A
Sbjct: 450 HALVEEKVDFENLGLVIVDEQHRFGVQQR----FKLMRKPGANGVA-------------T 492
Query: 687 APHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLAL +YGD+ ++ I +LPPGR PI T
Sbjct: 493 EPDVLVMTATPIPRTLALTVYGDLEVSIIDELPPGRTPIVT 533
>gi|313676091|ref|YP_004054087.1| ATP-dependent DNA helicase recG [Marivirga tractuosa DSM 4126]
gi|312942789|gb|ADR21979.1| ATP-dependent DNA helicase RecG [Marivirga tractuosa DSM 4126]
Length = 697
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 130/315 (41%), Positives = 177/315 (56%), Gaps = 41/315 (13%)
Query: 413 DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLG 472
+ +P I Q++G L DA + IH PK+ AR R+ FDEFF++QL L Q
Sbjct: 184 ETLPPHILQQYGFLAKRDAVVQIHVPKNQQLLQKARFRMKFDEFFFMQLRLLMQ------ 237
Query: 473 TQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVP 532
K R + ++ LT+ LP+ LT +Q I EI D K
Sbjct: 238 ---------KKVRLEKFKGQLLQKTDLLTEFYQSHLPFDLTGAQKKVIKEIFSDFKSGKQ 288
Query: 533 MNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKH 592
MNRLLQGDVG GKT+VAF++ + I SG Q A M PT++LA QHYE L + DK
Sbjct: 289 MNRLLQGDVGSGKTIVAFISALIAIDSGAQVALMAPTQILANQHYEGLKEF-----ADKI 343
Query: 593 KPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGV 652
IALLTGST K R I ++L++G++ +++GTH+L+ E V+F L LAIVDEQ R+GV
Sbjct: 344 GVTIALLTGSTKTKARREIHENLKSGELKILVGTHALLEEVVQFQNLGLAIVDEQHRYGV 403
Query: 653 VQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSL 712
QR R K +++ PHVL M+ATPIPRTL++++YGD+ +
Sbjct: 404 AQRARLWKK---------------------NENFVPHVLIMTATPIPRTLSMSVYGDLDI 442
Query: 713 TQITDLPPGRIPIKT 727
+ I +LP GR PIKT
Sbjct: 443 SIIDELPKGRKPIKT 457
>gi|307276670|ref|ZP_07557788.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX2134]
gi|384514337|ref|YP_005709430.1| DNA helicase RecG [Enterococcus faecalis OG1RF]
gi|430360163|ref|ZP_19426140.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis OG1X]
gi|430366193|ref|ZP_19427374.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis M7]
gi|306506780|gb|EFM75932.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX2134]
gi|327536226|gb|AEA95060.1| DNA helicase RecG [Enterococcus faecalis OG1RF]
gi|429513075|gb|ELA02668.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis OG1X]
gi|429517207|gb|ELA06674.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis M7]
Length = 678
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 254/527 (48%), Gaps = 94/527 (17%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIIS 268
+S +PG+ + L+ G T+ LL ++P Y D+Q + ++ D + G ++S
Sbjct: 6 LVSVLPGVGPKRAENLQELGIATIEDLLTYYPFRYDDIQEKDLSEIQDQEKVTLKGLVVS 65
Query: 269 SRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ + G S L + E A V+N+ F +
Sbjct: 66 EAVVSRYGYKKSRLTFRMMQEHA---------VINVS-------------------FFNQ 97
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLK-DEDDLSLRAKGRPYPIY 386
PFLK K + E + V GK A R + + I K D +D + PIY
Sbjct: 98 PFLKD---KVVLSEEIAVYGKWDAKRKS----LNGMKILASKGDNEDFA--------PIY 142
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
+ S L I A + + + + P ++ +++ L+ +A +H P + +E+
Sbjct: 143 HVNKKVRQSTLVQLIRTAFEEYGSLVEEILPNDLLEKYRLMPRKEAMWAMHFPSNPEESH 202
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
A++R++F+EFF QL ++GL Q EK GL +Y RL K
Sbjct: 203 QAKRRVVFEEFFLFQLK-----MQGLKKQEKAEKNGLAVQYDVDRL------------KT 245
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
+ LP+ LT +Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G+Q
Sbjct: 246 FTQGLPFELTGAQKKVTNEICRDLRSPKHMQRLLQGDVGSGKTVVAAIALYATMTAGFQG 305
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A MVPTE+LA QH E L +L D +E + ALLTGST K+ R+I ++L G+I +V
Sbjct: 306 ALMVPTEILAQQHMESLQQLFDPLE-----VRTALLTGSTKTKERRLILEELANGEIDIV 360
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GTH+LI + V F L L I DEQ RFGV QR K
Sbjct: 361 VGTHALIQQDVSFHQLGLVITDEQHRFGVNQRKILREK---------------------- 398
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+ P VL M+ATPIPRTLA+ YG+M ++ I ++P GRIPI+T I
Sbjct: 399 -GLKPDVLFMTATPIPRTLAITAYGEMDVSIIDEMPAGRIPIETRWI 444
>gi|255974275|ref|ZP_05424861.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis T2]
gi|256618137|ref|ZP_05474983.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ATCC 4200]
gi|300861637|ref|ZP_07107721.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TUSoD Ef11]
gi|307284862|ref|ZP_07565018.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0860]
gi|422720844|ref|ZP_16777451.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0017]
gi|422738672|ref|ZP_16793863.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX2141]
gi|428768218|ref|YP_007154329.1| ATP-dependent DNA helicase [Enterococcus faecalis str. Symbioflor
1]
gi|255967147|gb|EET97769.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis T2]
gi|256597664|gb|EEU16840.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis ATCC 4200]
gi|295114424|emb|CBL33061.1| ATP-dependent DNA helicase RecG [Enterococcus sp. 7L76]
gi|300849098|gb|EFK76851.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TUSoD Ef11]
gi|306503121|gb|EFM72378.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0860]
gi|315031793|gb|EFT43725.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0017]
gi|315145460|gb|EFT89476.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX2141]
gi|427186391|emb|CCO73615.1| ATP-dependent DNA helicase [Enterococcus faecalis str. Symbioflor
1]
Length = 678
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 254/527 (48%), Gaps = 94/527 (17%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIIS 268
+S +PG+ + L+ G T+ LL ++P Y D+Q + ++ D + G ++S
Sbjct: 6 LVSVLPGVGPKRAENLQELGIATIEDLLTYYPFRYDDIQEKDLSEIQDQEKVTLKGLVVS 65
Query: 269 SRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ + G S L + E A V+N+ F +
Sbjct: 66 EAVVSRYGYKKSRLTFRMMQEHA---------VINVS-------------------FFNQ 97
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLK-DEDDLSLRAKGRPYPIY 386
PFLK K + E + V GK A R + + I K D +D + PIY
Sbjct: 98 PFLKD---KVVLSEEIAVYGKWDAKRKS----LNGMKILASKGDNEDFA--------PIY 142
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
+ S L I A + + + + P ++ +++ L+ +A +H P + +E+
Sbjct: 143 HVNKKVRQSTLVQLIRTAFEEYGSLVEEILPNDLLEKYRLMPRKEAMWAMHFPSNPEESH 202
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
A++R++F+EFF QL ++GL Q EK GL +Y RL K
Sbjct: 203 QAKRRVVFEEFFLFQLK-----MQGLKKQEKAEKNGLAIQYDVDRL------------KT 245
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
+ LP+ LT +Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G+Q
Sbjct: 246 FTQGLPFELTGAQKKVTNEICRDLRSPKHMQRLLQGDVGSGKTVVAAIALYATMTAGFQG 305
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A MVPTE+LA QH E L +L D +E + ALLTGST K+ R+I ++L G+I +V
Sbjct: 306 ALMVPTEILAQQHMESLQQLFDPLE-----VRTALLTGSTKTKERRLILEELANGEIDIV 360
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GTH+LI + V F L L I DEQ RFGV QR K
Sbjct: 361 VGTHALIQQDVSFHQLGLVITDEQHRFGVNQRKILREK---------------------- 398
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+ P VL M+ATPIPRTLA+ YG+M ++ I ++P GRIPI+T I
Sbjct: 399 -GLKPDVLFMTATPIPRTLAITAYGEMDVSIIDEMPAGRIPIETRWI 444
>gi|422696083|ref|ZP_16754060.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX4244]
gi|315146597|gb|EFT90613.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX4244]
Length = 678
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 254/527 (48%), Gaps = 94/527 (17%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIIS 268
+S +PG+ + L+ G T+ LL ++P Y D+Q + ++ D + G ++S
Sbjct: 6 LVSVLPGVGPKRAENLQELGIATIEDLLTYYPFRYDDIQEKDLSEIQDQEKVTLKGLVVS 65
Query: 269 SRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ + G S L + E A V+N+ F +
Sbjct: 66 EAVVSRYGYKKSRLTFRMMQEHA---------VINVS-------------------FFNQ 97
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLK-DEDDLSLRAKGRPYPIY 386
PFLK K + E + V GK A R + + I K D +D + PIY
Sbjct: 98 PFLKD---KVVLSEEIAVYGKWDAKRKS----LNGMKILASKGDNEDFA--------PIY 142
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
+ S L I A + + + + P ++ +++ L+ +A +H P + +E+
Sbjct: 143 HVNKKVRQSTLVQLIRTAFEEYGSLVEEILPNDLLEKYRLMPRKEAMWAMHFPSNPEESH 202
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
A++R++F+EFF QL ++GL Q EK GL +Y RL K
Sbjct: 203 QAKRRVVFEEFFLFQLK-----MQGLKKQEKAEKNGLAVQYDVDRL------------KT 245
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
+ LP+ LT +Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G+Q
Sbjct: 246 FTQGLPFELTGAQKKVTNEICRDLRSPKHMQRLLQGDVGSGKTVVAAIALYATMTAGFQG 305
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A MVPTE+LA QH E L +L D +E + ALLTGST K+ R+I ++L G+I +V
Sbjct: 306 ALMVPTEILAQQHMESLQQLFDPLE-----VRTALLTGSTKTKERRLILEELANGEIDIV 360
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GTH+LI + V F L L I DEQ RFGV QR K
Sbjct: 361 VGTHALIQQDVSFHQLGLVITDEQHRFGVNQRKILREK---------------------- 398
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+ P VL M+ATPIPRTLA+ YG+M ++ I ++P GRIPI+T I
Sbjct: 399 -GLKPDVLFMTATPIPRTLAITAYGEMDVSIIDEMPAGRIPIETRWI 444
>gi|29377569|ref|NP_816723.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis V583]
gi|227554533|ref|ZP_03984580.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis HH22]
gi|256962943|ref|ZP_05567114.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis HIP11704]
gi|257083222|ref|ZP_05577583.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis Fly1]
gi|257088220|ref|ZP_05582581.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis D6]
gi|257417957|ref|ZP_05594951.1| ATP-dependent DNA helicase recG [Enterococcus faecalis T11]
gi|307273601|ref|ZP_07554829.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0855]
gi|422700451|ref|ZP_16758298.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX1342]
gi|422713882|ref|ZP_16770630.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0309A]
gi|422718493|ref|ZP_16775146.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0309B]
gi|422723556|ref|ZP_16780091.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX2137]
gi|29345036|gb|AAO82793.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis V583]
gi|227176331|gb|EEI57303.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis HH22]
gi|256953439|gb|EEU70071.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis HIP11704]
gi|256991252|gb|EEU78554.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis Fly1]
gi|256996250|gb|EEU83552.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis D6]
gi|257159785|gb|EEU89745.1| ATP-dependent DNA helicase recG [Enterococcus faecalis T11]
gi|306509614|gb|EFM78656.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0855]
gi|315026444|gb|EFT38376.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX2137]
gi|315171209|gb|EFU15226.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX1342]
gi|315573261|gb|EFU85452.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0309B]
gi|315581165|gb|EFU93356.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0309A]
Length = 678
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 254/527 (48%), Gaps = 94/527 (17%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIIS 268
+S +PG+ + L+ G T+ LL ++P Y D+Q + ++ D + G ++S
Sbjct: 6 LVSVLPGVGPKRAENLQELGIATIEDLLTYYPFRYDDIQEKDLSEIQDQEKVTLKGLVVS 65
Query: 269 SRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ + G S L + E A V+N+ F +
Sbjct: 66 EAVVSRYGYKKSRLTFRMMQEHA---------VINVS-------------------FFNQ 97
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLK-DEDDLSLRAKGRPYPIY 386
PFLK K + E + V GK A R + + I K D +D + PIY
Sbjct: 98 PFLKD---KVVLSEEIAVYGKWDAKRKS----LNGMKILASKGDNEDFA--------PIY 142
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
+ S L I A + + + + P ++ +++ L+ +A +H P + +E+
Sbjct: 143 HVNKKVRQSTLVQLIRTAFEEYGSLVEEILPNDLLEKYRLMPRKEAMWAMHFPSNPEESH 202
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
A++R++F+EFF QL ++GL Q EK GL +Y RL K
Sbjct: 203 QAKRRVVFEEFFLFQLK-----MQGLKKQEKAEKNGLAIQYDVDRL------------KT 245
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
+ LP+ LT +Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G+Q
Sbjct: 246 FTQGLPFELTGAQKKVTNEICRDLRSPKHMQRLLQGDVGSGKTVVAAIALYATMTAGFQG 305
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A MVPTE+LA QH E L +L D +E + ALLTGST K+ R+I ++L G+I +V
Sbjct: 306 ALMVPTEILAQQHMESLQQLFDPLE-----VRTALLTGSTKTKERRLILEELANGEIDIV 360
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GTH+LI + V F L L I DEQ RFGV QR K
Sbjct: 361 VGTHALIQQDVSFHQLGLVITDEQHRFGVNQRKILREK---------------------- 398
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+ P VL M+ATPIPRTLA+ YG+M ++ I ++P GRIPI+T I
Sbjct: 399 -GLKPDVLFMTATPIPRTLAITAYGEMDVSIIDEMPAGRIPIETRWI 444
>gi|422736041|ref|ZP_16792306.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX1341]
gi|315167213|gb|EFU11230.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX1341]
Length = 678
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 171/529 (32%), Positives = 255/529 (48%), Gaps = 98/529 (18%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIIS 268
+S +PG+ + L+ G T+ LL ++P Y D+Q + ++ D + G ++S
Sbjct: 6 LVSVLPGVGPKRAENLQELGIATIEDLLTYYPFRYDDIQEKDLSEIQDQEKVTLKGLVVS 65
Query: 269 SRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ + G S L + E A V+N+ F +
Sbjct: 66 EAVVSRYGYKKSRLTFRMMQEHA---------VINVS-------------------FFNQ 97
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLK---DEDDLSLRAKGRPYP 384
PFLK K + E + V GK A R + + + +L D +D + P
Sbjct: 98 PFLKD---KVVLSEEIAVYGKWDAKRKSLN------GMKILASKGDNEDFA--------P 140
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKHIDE 443
IY + S L I A + + + + P ++ +++ L+ +A +H P + +E
Sbjct: 141 IYHVNKKVRQSTLVQLIRTAFEEYGSLVEEILPNDLLEKYRLMPRKEAMWAMHFPSNPEE 200
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWSSLT 501
+ A++R++F+EFF QL ++GL Q EK GL +Y RL
Sbjct: 201 SHQAKRRVVFEEFFLFQLK-----MQGLKKQEKAEKNGLAIQYDVDRL------------ 243
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
K + LP+ LT +Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G+
Sbjct: 244 KTFTQGLPFELTGAQKKVTNEICRDLRSPKHMQRLLQGDVGSGKTVVAAIALYATMTAGF 303
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q A MVPTE+LA QH E L +L D +E + ALLTGST K+ R+I ++L G+I
Sbjct: 304 QGALMVPTEILAQQHMESLQQLFDPLE-----VRTALLTGSTKTKERRLILEELANGEID 358
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+V+GTH+LI + V F L L I DEQ RFGV QR K
Sbjct: 359 IVVGTHALIQQDVSFHQLGLVITDEQHRFGVNQRKILREK-------------------- 398
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+ P VL M+ATPIPRTLA+ YG+M ++ I ++P GRIPI+T I
Sbjct: 399 ---GLKPDVLFMTATPIPRTLAITAYGEMDVSIIDEMPAGRIPIETRWI 444
>gi|399926392|ref|ZP_10783750.1| ATP-dependent DNA helicase RecG [Myroides injenensis M09-0166]
Length = 700
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 172/547 (31%), Positives = 269/547 (49%), Gaps = 107/547 (19%)
Query: 206 LLDKCISCVPGLSKRLYHQLEN-CGFYTLRKLLHHFPRTYAD---------LQNAQIDLD 255
LLD I + G+ + L+ G + R LLH +P Y D L N ++
Sbjct: 5 LLDTPIEYLKGVGPQRADLLKKELGIFKYRDLLHLYPNRYIDRTRFYKINELSNTNSEVQ 64
Query: 256 DGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHL 315
I + + RG + +F T+ T E+V
Sbjct: 65 IIGKIIHLKTVEQKRGKRLVATF-------------TDGTGEIELV-------------- 97
Query: 316 KKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLS 375
+F+G K I+ K+ GK+ + N+ + + +++++D +
Sbjct: 98 --WFQG--------FKWIQENLKINTPYVAFGKLNSF--NHTFSIPHPELELVEDRNKNV 145
Query: 376 LRAKGRPYPIYPSKGGLNASL----LRDTIARALQALPANF-DPVPKEITQEFGLLCLFD 430
A +YPS L A + + +A+ LQ F D +P+E+ + G++ + +
Sbjct: 146 ASAM---QAVYPSTEKLGARISNKHMLKMMAQLLQETHLLFTDTLPQELRSKLGMISMQE 202
Query: 431 AYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGT----QFEKEGLLDKYRK 486
A + IH PK+++ + A RL F+E FY+QL L + + G FEK G
Sbjct: 203 ALINIHFPKNMEILNRAEFRLKFEELFYIQLQLLIKNIARKGKIKGFPFEKVG------- 255
Query: 487 PRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKT 546
N Y + LP+ LT++Q I EI D+ QP MNRLLQGDVG GKT
Sbjct: 256 ENFNTFYTD-----------HLPFPLTNAQKRVIKEIRNDVGQPAQMNRLLQGDVGSGKT 304
Query: 547 VVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVK 606
+VAF++C+ I +G+QA + PTE+LATQH+ + +L + + + I LLTGST +
Sbjct: 305 IVAFMSCLLAIDNGFQACIVAPTEILATQHFIGISELAEPLGLN-----IKLLTGSTKIA 359
Query: 607 QSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTS 666
+ R+I ++L+ G++ ++IGTH+L +KV F L LA++DEQ RFGV QR SKL+ +
Sbjct: 360 ERRIIHEELENGELQILIGTHALFEDKVIFKNLGLAVIDEQHRFGVEQR----SKLWRKN 415
Query: 667 MSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIK 726
+ + PH+L M+ATPIPRTLA+ LYGD+ ++ I +LPPGR PI+
Sbjct: 416 V------------------IPPHILVMTATPIPRTLAMTLYGDLEVSVIDELPPGRKPIQ 457
Query: 727 T-YIIEG 732
T + EG
Sbjct: 458 TLHFFEG 464
>gi|307292130|ref|ZP_07571996.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0411]
gi|306496783|gb|EFM66334.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis TX0411]
Length = 678
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 171/529 (32%), Positives = 255/529 (48%), Gaps = 98/529 (18%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIIS 268
+S +PG+ + L+ G T+ LL ++P Y D+Q + ++ D + G ++S
Sbjct: 6 LVSVLPGVGPKRAENLQELGIATIEDLLTYYPFRYDDIQEKDLSEIQDQEKVTLKGLVVS 65
Query: 269 SRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ + G S L + E A V+N+ F +
Sbjct: 66 EAVVSRYGYKKSRLTFRMMQEHA---------VINVS-------------------FFNQ 97
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLK---DEDDLSLRAKGRPYP 384
PFLK K + E + V GK A R + + + +L D +D + P
Sbjct: 98 PFLKD---KVVLSEEIAVYGKWDAKRKSLN------GMKILASKGDNEDFA--------P 140
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKHIDE 443
IY + S L I A + + + + P ++ +++ L+ +A +H P + +E
Sbjct: 141 IYHVNKKVRQSTLVQLIRTAFEEYGSLVEEILPNDLLEKYRLMPRKEAMWAMHFPSNPEE 200
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWSSLT 501
+ A++R++F+EFF QL ++GL Q EK GL +Y RL
Sbjct: 201 SHQAKRRVVFEEFFLFQLK-----MQGLKKQEKAEKNGLAIQYDVDRL------------ 243
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
K + LP+ LT +Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G+
Sbjct: 244 KTFTQGLPFELTGAQKKVTNEICRDLRSPKHMQRLLQGDVGSGKTVVAAIALYATMTAGF 303
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q A MVPTE+LA QH E L +L D +E + ALLTGST K+ R+I ++L G+I
Sbjct: 304 QGALMVPTEILAQQHMESLQQLFDPLE-----VRTALLTGSTKTKERRLILEELANGEID 358
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+V+GTH+LI + V F L L I DEQ RFGV QR K
Sbjct: 359 IVVGTHALIQQDVSFHQLGLVITDEQHRFGVNQRKILREK-------------------- 398
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+ P VL M+ATPIPRTLA+ YG+M ++ I ++P GRIPI+T I
Sbjct: 399 ---GLKPDVLFMTATPIPRTLAITAYGEMDVSIIDEMPAGRIPIETRWI 444
>gi|116070692|ref|ZP_01467961.1| ATP-dependent DNA helicase RecG [Synechococcus sp. BL107]
gi|116066097|gb|EAU71854.1| ATP-dependent DNA helicase RecG [Synechococcus sp. BL107]
Length = 773
Score = 228 bits (581), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 172/536 (32%), Positives = 256/536 (47%), Gaps = 67/536 (12%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L+ I+ + G+ +L +L + ++ LL H+PR + D + +
Sbjct: 74 LESPITRIKGVGPKLASRLASLNLLLVKDLLRHYPRDHVDYSSMR--------------- 118
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
+ AG + + + I C + ++ + Q L + +F G RF+S
Sbjct: 119 -RIEALVAGETATIVATIRRCNGFVSPRNPNLAILELQL-QDPTGRLKVTRFLAGKRFSS 176
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEM--REYNIDVLKDEDDLSLRAK-GRPY 383
+LK + + G V VSG V+ + Y + ++ I+VL++ A GR
Sbjct: 177 QAYLKGQQRLYPAGASVAVSGLVK----DGAYGLSFQDPLIEVLENPSSPVKSASIGRLL 232
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
P+Y G+ A R I + L +P+P+ + Q F LL + +A +H PK
Sbjct: 233 PVYALTEGVGADRFRGLIEQVLPLTEQWTEPLPEALRQTFDLLSVSEALQALHAPKDRTT 292
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
D R RL+FDEF LQLG L + + GLL + L +
Sbjct: 293 LDRGRHRLVFDEFLLLQLGLLRRRQALRSRPGPELGLLPSTQ-------------GLVQD 339
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
L + T +Q + EI DL Q PM RL+QGDVG GKTVVA A + I SG+Q
Sbjct: 340 FRDLLSFQFTEAQQRVLHEIEADLAQSKPMARLVQGDVGSGKTVVAIAALLSTIASGWQG 399
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A M PTE+LA QH+ +L L + + LLTGSTP + R + DL +G + L+
Sbjct: 400 ALMAPTEVLAEQHHRNLCHWLPQLHI-----TVELLTGSTPRPRRRQLLDDLASGSLKLL 454
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GTH+L+ + V F L L +VDEQ RFGV QR R +K
Sbjct: 455 VGTHALLEDPVVFERLGLVVVDEQHRFGVHQRDRLLNK---------------------- 492
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEG--NEKGY 737
+ PH+L M+ATPIPRTLAL+++GD+ ++QI +LPPGR PIKT ++ EK Y
Sbjct: 493 -GLQPHLLTMTATPIPRTLALSVHGDLDVSQIDELPPGRTPIKTAMLSAGQREKAY 547
>gi|256761066|ref|ZP_05501646.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis T3]
gi|256682317|gb|EEU22012.1| ATP-dependent DNA helicase RecG [Enterococcus faecalis T3]
Length = 678
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 254/527 (48%), Gaps = 94/527 (17%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIIS 268
+S +PG+ + L+ G T+ LL ++P Y D+Q + ++ D + G ++S
Sbjct: 6 LVSVLPGVGPKRAENLQELGIATIEDLLTYYPFRYDDIQEKDLSEIQDQEKVTLKGLVVS 65
Query: 269 SRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ + G S L + E A V+N+ F +
Sbjct: 66 EAVVSRYGYKKSRLMFRMMQEHA---------VINVS-------------------FFNQ 97
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLK-DEDDLSLRAKGRPYPIY 386
PFLK K + E + V GK A R + + I K D +D + PIY
Sbjct: 98 PFLKD---KVVLSEEIAVYGKWDAKRKS----LNGMKILASKGDNEDFA--------PIY 142
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
+ S L I A + + + + P ++ +++ L+ +A +H P + +E+
Sbjct: 143 HVNKKVRQSTLVQLIRTAFEEYGSLVEEILPNDLLEKYRLMPRKEAMWAMHFPSNPEESH 202
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
A++R++F+EFF QL ++GL Q EK GL +Y RL K
Sbjct: 203 QAKRRVVFEEFFLFQLK-----MQGLKKQEKAEKNGLAIQYDVDRL------------KT 245
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
+ LP+ LT +Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G+Q
Sbjct: 246 FTQGLPFELTGAQKKVTNEICRDLRSPKHMQRLLQGDVGSGKTVVAAIALYATMTAGFQG 305
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A MVPTE+LA QH E L +L D +E + ALLTGST K+ R+I ++L G+I +V
Sbjct: 306 ALMVPTEILAQQHMESLQQLFDPLE-----VRTALLTGSTKTKERRLILEELANGEIDIV 360
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GTH+LI + V F L L I DEQ RFGV QR K
Sbjct: 361 VGTHALIQQDVSFHQLGLVITDEQHRFGVNQRKILREK---------------------- 398
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+ P VL M+ATPIPRTLA+ YG+M ++ I ++P GRIPI+T I
Sbjct: 399 -GLKPDVLFMTATPIPRTLAITAYGEMDVSIIDEMPAGRIPIETRWI 444
>gi|423130564|ref|ZP_17118239.1| ATP-dependent DNA helicase RecG [Myroides odoratimimus CCUG 12901]
gi|371644423|gb|EHO09954.1| ATP-dependent DNA helicase RecG [Myroides odoratimimus CCUG 12901]
Length = 700
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 176/532 (33%), Positives = 264/532 (49%), Gaps = 88/532 (16%)
Query: 206 LLDKCISCVPGLS-KRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIG 264
LLD I + G+ +R G +T R LLH +P Y +D QY+ I
Sbjct: 5 LLDTPIEYLKGVGPQRADLFKRELGIFTYRDLLHLYPNRY---------IDRTQYYK-IN 54
Query: 265 EIISSRGMKAGCSFSFLEV-IVG--CEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRG 321
E+ ++ EV IVG I E G +V + +I L +F+G
Sbjct: 55 ELYNNNS----------EVQIVGKIIHIKTVEQKRGKRLVATFTDGTGQIEL---VWFQG 101
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
++ I+ K+ GK+ + NN + M +D+L++ A
Sbjct: 102 YKW--------IQENLKLNTPYVAFGKLNSF--NNTFSMPHPELDLLEEHQKNIANAMQA 151
Query: 382 PYPIYPSKGGL--NASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPK 439
YP G N S+++ + + P D + E ++ L+ + +A + IH PK
Sbjct: 152 VYPSTEKFGARISNKSIIKMMMQLVKETHPLFMDTLSDEFKRKLNLISMQEALINIHFPK 211
Query: 440 HIDEADLARKRLIFDEFFYLQLGRLYQML----EGLGTQFEKEGLLDKYRKPRLNAAYME 495
++D + A+ RL F+E FY+QL L + + + G FEK G N Y E
Sbjct: 212 NMDMLNKAQFRLKFEELFYVQLQLLIKNIARKDKIKGYPFEKVG-------DYFNTFYSE 264
Query: 496 GWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
LP+ LT +Q + EI D+ P MNRLLQGDVG GKT+VAF++C+
Sbjct: 265 -----------HLPFPLTGAQKRVLKEIRNDVGAPAQMNRLLQGDVGSGKTIVAFMSCLL 313
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
+ +G+QA + PTE+LATQHY + +L + + KI LLTGST R++ ++L
Sbjct: 314 ALDNGFQACIVAPTEILATQHYVGIKELGEPL-----GLKIKLLTGSTKTVDRRVLHEEL 368
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
+G++ ++IGTH+L +KV F L LAI+DEQ RFGV QR SKL++ +
Sbjct: 369 ASGELHILIGTHALFEDKVIFKNLGLAIIDEQHRFGVEQR----SKLWHKN--------- 415
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PHVL M+ATPIPRTLA++LYGD+ ++ I +LPPGR PI+T
Sbjct: 416 ---------ELPPHVLVMTATPIPRTLAMSLYGDLDISVIDELPPGRKPIQT 458
>gi|220931855|ref|YP_002508763.1| ATP-dependent DNA helicase RecG [Halothermothrix orenii H 168]
gi|219993165|gb|ACL69768.1| ATP-dependent DNA helicase RecG [Halothermothrix orenii H 168]
Length = 683
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 168/524 (32%), Positives = 246/524 (46%), Gaps = 86/524 (16%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADL-QNAQIDLDDGQYFIFI-GEII 267
+ V G+ R L+ T++ LL++FPRTY D Q I Y + + GEII
Sbjct: 8 SVQFVRGVGPRYAEVLKKLNINTVKDLLYYFPRTYQDRSQFTPIKYIRPGYEVTVQGEII 67
Query: 268 SSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
K S L+ + T G +V+N G F
Sbjct: 68 KIEENKIRKGLSILKATI---------TDGSDVLN------------------GVWFNQ- 99
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYP 387
I+ + K G+ SGK+ + + +E + V + D GR PIYP
Sbjct: 100 ---NYIKKQLKKGQTYIFSGKLNE--KSFRFRKKEISNPVFEKVDKGDSIHTGRIVPIYP 154
Query: 388 SKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL 446
G+ LR I AL + D +P I +++ + + G+H P++ +
Sbjct: 155 LTSGVTQKRLRTIIYNALNDYAHHLTDYLPGFIRKKYKFPDISRSIWGLHFPENREHYIY 214
Query: 447 ARKRLIFDEFFYLQL---GRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
+R+RL F+E F+LQL R ++E G + EG + KK
Sbjct: 215 SRRRLAFEELFFLQLLVLKRKKGIIESRGINHKDEG-------------------EVIKK 255
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
L+ LP+ LT++Q EI D+++P PM RLLQGDVG GKT++A LA +E + +GYQ
Sbjct: 256 FLKLLPFRLTAAQKRVWREIKADMEKPTPMQRLLQGDVGSGKTIIAALALIETMANGYQG 315
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
FM PTE+LA QHY LKL D +E + + ALL G Q I + ++ I L+
Sbjct: 316 VFMAPTEILAEQHY---LKLKDLLEPLGY--RTALLVGGITGSQRENIERGIEEKKIDLI 370
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GTH+L E++ + +L L ++DEQ RFGV QR + K D
Sbjct: 371 VGTHTLFQERINYFSLGLVVIDEQHRFGVEQRFKLEKK--------------GDN----- 411
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRT+AL +YGD+ L+ I +LPPGR P+ T
Sbjct: 412 ----PDVLVMTATPIPRTMALTIYGDLDLSIIDELPPGRSPVIT 451
>gi|238019125|ref|ZP_04599551.1| hypothetical protein VEIDISOL_00987 [Veillonella dispar ATCC 17748]
gi|237863824|gb|EEP65114.1| hypothetical protein VEIDISOL_00987 [Veillonella dispar ATCC 17748]
Length = 680
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 163/531 (30%), Positives = 251/531 (47%), Gaps = 83/531 (15%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFIG 264
+D+ ++ + G+ QL G + LL +FPR+Y D + +L G +G
Sbjct: 1 MDERLTTIKGIGPGREKQLHKLGITNVTSLLTYFPRSYEDRRTIYRIGELKSGMTGGVMG 60
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
+I+ + + S LEV+ IAD T ++V + G KK Y
Sbjct: 61 NVIAVQEKRPRPRLSILEVV----IADG--TGPLKIVLFNQGYKKNFY------------ 102
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
K G+ + GK + Y + N +++ D +G P
Sbjct: 103 -------------KKGQRLYAYGK-----AEFQYGAMQMNTPQIENLGDGGEPDRG-IVP 143
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
IY G++ ++R ++ A + +P E+ + + +DA+ +H P +
Sbjct: 144 IYALADGVSQFVVRSSVRNWFAANHELQEILPAEVREAHQYMSRYDAFKMMHFPASSERY 203
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
+ AR +L ++E F +Q G L + ++ + M L +
Sbjct: 204 EEARHQLAYEELFVMQSGLA----------------LLRNKEQCHKGSKMGPNGDLMAQC 247
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
+ LP+SLT Q A+ +I D++ PM RLLQGDVG GKTVVA L+ ++ I +GYQ A
Sbjct: 248 IENLPFSLTGDQQRALEDIRIDMEDERPMQRLLQGDVGSGKTVVATLSLLKAIENGYQGA 307
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
M PTE+LA QHYE + ++ N+ I LLTGST K+ I + L G I ++I
Sbjct: 308 LMAPTEILAAQHYEGITEVCRNL-----GITIELLTGSTTKKEKERIYEGLADGSINMII 362
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+LI E V F L L I+DEQ RFGV QR R K Y
Sbjct: 363 GTHALIQEGVNFHNLGLVIIDEQHRFGVEQRARLQQKGTY-------------------- 402
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
PHVL M+ATPIPRT+ L++YGD++++ I ++PPGR P+KTY ++ + K
Sbjct: 403 ---PHVLIMTATPIPRTMTLSVYGDLAVSLIKEMPPGRKPVKTYAVDSSYK 450
>gi|410584628|ref|ZP_11321730.1| ATP-dependent DNA helicase RecG [Thermaerobacter subterraneus DSM
13965]
gi|410504214|gb|EKP93726.1| ATP-dependent DNA helicase RecG [Thermaerobacter subterraneus DSM
13965]
Length = 954
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 165/527 (31%), Positives = 245/527 (46%), Gaps = 79/527 (14%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
+ +PG+ +R +L G +T LL H PR Y D + + GE+ + +
Sbjct: 243 LGRLPGVGRRQAQRLARLGLHTAGDLLWHLPRRYEDRSTWKPIAR-----LVPGEVATVQ 297
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFL 330
G V+V + T T V I G + + + FR +P
Sbjct: 298 G-----------VVVAAQRVPTRTRRVVVRVTISDGSGRLDAVFFNQPFR---LQQLP-- 341
Query: 331 KSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKG 390
G V +SG+V A ++M +++L+ E D + R P+YP+
Sbjct: 342 --------PGRPVRLSGRVEA--GYRGWQMDHPEVELLEGEGDEPVHT-ARIVPVYPATE 390
Query: 391 GLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKHIDEADLARK 449
GL+ LR + + AL + P+E+ ++ L+ A IH P + AR+
Sbjct: 391 GLHQRWLRQLAWQVVGALAGRVPEILPEELRRQLNLVERAQALRDIHFPPDAEAWQAARR 450
Query: 450 RLIFDEFFYLQLGRLYQMLEGLGTQFEKE-GLLDKYRKPRLNAAYMEGWSSLTKKLLRAL 508
RL F+E+F +Q+ L + +Q ++E G + PR+ + L AL
Sbjct: 451 RLAFEEWFVMQVA-----LARVRSQQQQEPGRAHRPDGPRV------------ARFLAAL 493
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
P+ LT +Q + EI D++ P PM RL+QGDVG GKTV+A A ++ + SG QAA M P
Sbjct: 494 PFELTPAQRRVLDEIRADMEAPRPMRRLVQGDVGSGKTVIAAWAMVKAVESGAQAALMAP 553
Query: 569 TELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHS 628
TE+LA QH L +LL + LL GS P + + L TG +V+GTH+
Sbjct: 554 TEILAEQHARRLQQLLAPAGI-----PVVLLVGSQPAADRERVLQGLATGQWPVVVGTHA 608
Query: 629 LIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAP 688
LI E V F L L I+DEQ RFGV QR D+ P
Sbjct: 609 LIQENVRFRDLGLVIIDEQHRFGVRQRALLQ-----------------------DKGRRP 645
Query: 689 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
+L M+ATPIPRTLAL LYGD+ ++ I LPPGR P++T + G ++
Sbjct: 646 DLLVMTATPIPRTLALTLYGDLDVSVIDQLPPGRQPVRTVWLRGRQR 692
>gi|423134262|ref|ZP_17121909.1| ATP-dependent DNA helicase RecG [Myroides odoratimimus CIP 101113]
gi|371647019|gb|EHO12529.1| ATP-dependent DNA helicase RecG [Myroides odoratimimus CIP 101113]
Length = 700
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 176/532 (33%), Positives = 263/532 (49%), Gaps = 88/532 (16%)
Query: 206 LLDKCISCVPGLS-KRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIG 264
LLD I + G+ +R G +T R LLH +P Y +D QY+ I
Sbjct: 5 LLDTPIEYLKGVGPQRADLFKRELGIFTYRDLLHLYPNRY---------IDRTQYYK-IN 54
Query: 265 EIISSRGMKAGCSFSFLEV-IVG--CEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRG 321
E ++ EV IVG I E G +V + +I L +F+G
Sbjct: 55 EFYNNNS----------EVQIVGKIIHIKTVEQKRGKRLVATFTDGTGQIEL---VWFQG 101
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
++ I+ K+ GK+ + NN + M +D+L++ A
Sbjct: 102 YKW--------IQENLKLNTPYVAFGKLNSF--NNTFSMPHPELDLLEEHQKNIANAMQA 151
Query: 382 PYPIYPSKGGL--NASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPK 439
YP G N S+++ + + P D + E ++ L+ + +A + IH PK
Sbjct: 152 VYPSTEKFGARISNKSIIKMMMQLVKETHPLFIDTLSDEFKRKLNLISMQEALINIHFPK 211
Query: 440 HIDEADLARKRLIFDEFFYLQLGRLYQML----EGLGTQFEKEGLLDKYRKPRLNAAYME 495
++D A+ RL F+E FY+QL L + + + G FEK G N Y E
Sbjct: 212 NMDMLSKAQFRLKFEELFYVQLQLLIKNIARKDKIKGYPFEKVG-------DYFNTFYSE 264
Query: 496 GWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
LP+ LT +Q + EI D+ P MNRLLQGDVG GKT+VAF++C+
Sbjct: 265 -----------HLPFPLTGAQKRVLKEIRNDVGAPAQMNRLLQGDVGSGKTIVAFMSCLL 313
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
+ +G+QA + PTE+LATQHY + +L + + KI LLTGST + R++ ++L
Sbjct: 314 ALDNGFQACIVAPTEILATQHYVGIKELGEPL-----GLKIKLLTGSTKTAERRVLHEEL 368
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
+G++ ++IGTH+L +KV F L LAI+DEQ RFGV QR SKL++ +
Sbjct: 369 ASGELHILIGTHALFEDKVIFKNLGLAIIDEQHRFGVEQR----SKLWHKN--------- 415
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PHVL M+ATPIPRTLA++LYGD+ ++ I +LPPGR PI+T
Sbjct: 416 ---------ELPPHVLVMTATPIPRTLAMSLYGDLDISVIDELPPGRKPIQT 458
>gi|260892053|ref|YP_003238150.1| ATP-dependent DNA helicase RecG [Ammonifex degensii KC4]
gi|260864194|gb|ACX51300.1| ATP-dependent DNA helicase RecG [Ammonifex degensii KC4]
Length = 685
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 179/531 (33%), Positives = 263/531 (49%), Gaps = 87/531 (16%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADL---QNAQIDLDDGQYFIF 262
+ ++ + + G+ + L G T+ LL+H PR Y D + Q +D
Sbjct: 4 IWERPVQYLKGVGPQRARWLSRLGINTVGDLLYHLPRRYEDRTFSRPLQTLVD------- 56
Query: 263 IGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGT 322
GE +++RG EV+ + ++ SG +++ + + + +F T
Sbjct: 57 -GETVTARG----------EVLT---VEESTARSGLKIIRAALRHPEGTFYAV--WFNQT 100
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
T I K G V V+GKVR R E++ + ++ +DE+ ++ GR
Sbjct: 101 YLTQI---------LKPGVKVTVTGKVR--RLLGFIEIQVADFEIGEDEEGIN---SGRI 146
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHID 442
PIYPS L LR I RAL+ A + G A +H P ++
Sbjct: 147 VPIYPSTEKLPQRTLRSLIFRALEENAAELPELLPPHLLRQGFFTRAQALREVHFPSTLE 206
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
+A+ ARKRL+ +E F LQL LG ++ L +KP +G L +
Sbjct: 207 KAEEARKRLVLEELFLLQLA--------LG---QRRRHLASAQKP--YPCRPDG--PLVQ 251
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
+ L +LP++LT +Q A EI D++ P PM+RLLQGDVG GKTVVA LA ++ + +G Q
Sbjct: 252 QFLASLPFTLTPAQERAWREISRDMESPRPMHRLLQGDVGAGKTVVAALALVKAVENGLQ 311
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRK--DLQTGDI 620
A M PTE+LA QH+ +L LL+ + K+ LLTG+ +K+ R+ + GDI
Sbjct: 312 GALMAPTEILAEQHFLNLHPLLEKI-----GIKVGLLTGN--LKKELRWRQIAAIARGDI 364
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+LI E+V F L L ++DEQ RFGV QR ++ G
Sbjct: 365 DVVIGTHTLIQEEVSFHRLGLVVIDEQHRFGVRQR----------------TILRRKGE- 407
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
AP VL M+ATPIPRTLAL LYGD+ L+ I LPPGR P+KT I+
Sbjct: 408 ------APDVLVMTATPIPRTLALTLYGDLDLSVIDSLPPGRQPVKTIWIK 452
>gi|257876171|ref|ZP_05655824.1| ATP-dependent DNA helicase RecG [Enterococcus casseliflavus EC20]
gi|257810337|gb|EEV39157.1| ATP-dependent DNA helicase RecG [Enterococcus casseliflavus EC20]
Length = 676
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 171/529 (32%), Positives = 253/529 (47%), Gaps = 97/529 (18%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIG 264
+L++ ++ + G+ ++ L + G T+ LL ++P Y D+Q Q+ ++ D + G
Sbjct: 1 MLNQPLTVLKGVGEKRAQDLASLGIETIEDLLKYYPFRYEDIQERQLAEIQDQEKVTIKG 60
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK---FFRG 321
++S VVN +K ++ + + F
Sbjct: 61 IVVSP-----------------------------PVVNRFGYKKSRLQFRMMQDHDVFNV 91
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
+ F P+LK K +V E + V GK A R + I K +D +
Sbjct: 92 SFFNQ-PYLKD---KVEVSEEIAVYGKWDAKRKG----LTGMKILGSKSAEDFA------ 137
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKH 440
PIY + S+L + I +A + P + +++ LL A +H PK
Sbjct: 138 --PIYHVNKAVRQSVLIELIKQAFLDFGDQITEILPLSLIEKYRLLDRKSAMFAMHFPKD 195
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGL--GTQFEKEGLLDKYRKPRLNAAYMEGWS 498
E+ A++R+IF+EFF Q+ ++GL + EK GL Y RL
Sbjct: 196 PQESHQAKRRVIFEEFFLFQM-----QIQGLKKSEKAEKNGLAIDYDVQRL--------- 241
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
K+ R LP+ LT++Q +EI DLK P M RLLQGDVG GKTVVA +A +
Sbjct: 242 ---KEFTRKLPFELTNAQKRVTNEICHDLKSPQHMQRLLQGDVGSGKTVVAAIALYATMT 298
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+G+Q A MVPTE+LA QH E L +L D +E ALLTGST K+ R+I + L G
Sbjct: 299 AGFQGALMVPTEILAQQHLESLNQLFDPLE-----VTTALLTGSTKPKERRVILEQLAAG 353
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+I +++GTH+LI E V+F+ L L I DEQ RFGV QR K Y
Sbjct: 354 EIDIIVGTHALIQEGVDFAHLGLVITDEQHRFGVNQRKVLREKGYL-------------- 399
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLA+ YG+M ++ I ++P GRIP++T
Sbjct: 400 ---------PDVLFMTATPIPRTLAITAYGEMDVSVIDEMPAGRIPVET 439
>gi|325567339|ref|ZP_08144006.1| DNA helicase RecG [Enterococcus casseliflavus ATCC 12755]
gi|325158772|gb|EGC70918.1| DNA helicase RecG [Enterococcus casseliflavus ATCC 12755]
Length = 695
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 171/530 (32%), Positives = 253/530 (47%), Gaps = 97/530 (18%)
Query: 205 PLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFI 263
P+L++ ++ + G+ ++ L + G T+ LL ++P Y D+Q Q+ ++ D +
Sbjct: 19 PMLNQPLTVLKGVGEKRAQDLASLGIETIEDLLKYYPFRYEDIQERQLAEIQDQEKVTIK 78
Query: 264 GEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK---FFR 320
G ++S VVN +K ++ + + F
Sbjct: 79 GIVVSP-----------------------------PVVNRFGYKKSRLQFRMMQDHDVFN 109
Query: 321 GTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG 380
+ F P+LK K +V E + V GK A R + I K +D +
Sbjct: 110 VSFFNQ-PYLKD---KVEVSEEIAVYGKWDAKRKG----LTGMKILGSKSAEDFA----- 156
Query: 381 RPYPIYPSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPK 439
PIY + S+L + I +A + P + +++ LL A +H PK
Sbjct: 157 ---PIYHVNKVVRQSVLIELIKQAFLDFGDQITEILPLSLIEKYRLLDRKSAMFAMHFPK 213
Query: 440 HIDEADLARKRLIFDEFFYLQLGRLYQMLEGL--GTQFEKEGLLDKYRKPRLNAAYMEGW 497
E+ A++R+IF+EFF Q+ ++GL + EK GL Y RL
Sbjct: 214 DPQESHQAKRRVIFEEFFLFQM-----QIQGLKKSEKAEKNGLAIDYDVQRL-------- 260
Query: 498 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
K+ R LP+ LT++Q +EI DLK P M RLLQGDVG GKTVVA + +
Sbjct: 261 ----KEFTRKLPFELTNAQKRVTNEICHDLKSPQHMQRLLQGDVGSGKTVVAAITLYATM 316
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
+G+Q A MVPTE+LA QH E L +L D +E ALLTGST K+ R+I + L
Sbjct: 317 TAGFQGALMVPTEILAQQHLESLNQLFDPLE-----VTTALLTGSTKPKERRVILEQLAA 371
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
G+I +++GTH+LI E V+F+ L L I DEQ RFGV QR K Y
Sbjct: 372 GEIDIIVGTHALIQEGVDFAHLGLVITDEQHRFGVNQRKVLREKGYL------------- 418
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLA+ YG+M ++ I ++P GRIP++T
Sbjct: 419 ----------PDVLFMTATPIPRTLAITAYGEMDVSVIDEMPAGRIPVET 458
>gi|78184817|ref|YP_377252.1| ATP-dependent DNA helicase RecG [Synechococcus sp. CC9902]
gi|78169111|gb|ABB26208.1| ATP-dependent DNA helicase RecG [Synechococcus sp. CC9902]
Length = 850
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 155/430 (36%), Positives = 219/430 (50%), Gaps = 50/430 (11%)
Query: 313 LHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEM--REYNIDVLKD 370
L + +F G RF+S +LK + + G V VSG V+ + Y + ++ I+VL++
Sbjct: 240 LKVTRFLAGKRFSSQAYLKGQQRLYPAGASVAVSGLVK----DGAYGLSFQDPLIEVLEN 295
Query: 371 EDDLSLRAK-GRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLF 429
A GR P+Y G+ A R I + L +P+P+ + + FGLL +
Sbjct: 296 PTSPVKSASIGRLLPVYALTEGVGADRFRSLIEQVLPLTEQWIEPLPEPLRKTFGLLSVS 355
Query: 430 DAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRL 489
+A +H PK D R RL+FDEF LQLG L + + GLL +
Sbjct: 356 EALKALHAPKDRTTLDRGRHRLVFDEFLLLQLGLLRRRQALRSRPGPELGLLPSSQ---- 411
Query: 490 NAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVA 549
L + L + T +Q + EI DL Q PM RL+QGDVG GKTVVA
Sbjct: 412 ---------GLVQDFKDLLSFQFTDAQQRVLREIEADLAQSKPMARLVQGDVGSGKTVVA 462
Query: 550 FLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSR 609
A + I SG+Q A M PTE+LA QH+ +L + + LLTGSTP + R
Sbjct: 463 IAALLSTIASGWQGALMAPTEVLAEQHHRNLCHWFPQLHI-----TVELLTGSTPRPRRR 517
Query: 610 MIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSS 669
+ DL +G + L++GTH+L+ + V F L L +VDEQ RFGV QR R +K
Sbjct: 518 QLLDDLASGSLKLLVGTHALLEDPVVFERLGLVVVDEQHRFGVHQRDRLLNK-------- 569
Query: 670 GMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYI 729
+ PH+L M+ATPIPRTLAL+++GD+ ++QI +LPPGR PIKT +
Sbjct: 570 ---------------GLQPHLLTMTATPIPRTLALSVHGDLDVSQIDELPPGRTPIKTAM 614
Query: 730 IEG--NEKGY 737
+ EK Y
Sbjct: 615 LSAGQREKAY 624
>gi|430750380|ref|YP_007213288.1| ATP-dependent DNA helicase RecG [Thermobacillus composti KWC4]
gi|430734345|gb|AGA58290.1| ATP-dependent DNA helicase RecG [Thermobacillus composti KWC4]
Length = 683
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/349 (38%), Positives = 187/349 (53%), Gaps = 46/349 (13%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDP--VPKEITQEFGLLCLFDAYMGIHQPKHI 441
P+Y GG+ S +R TIA+ALQ + P +P E+ Q GL+ +A M IH P
Sbjct: 145 PVYSVGGGITQSWMRKTIAQALQQF-GHLVPEVLPHELIQRHGLMPRREAVMRIHAPGSA 203
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
+E AR+R+ ++E F QL + + R+ R A+ +++
Sbjct: 204 EEGQAARRRMAYEELFLFQL--------------KLQAYRAHTRRKRDGIAHTADNAAI- 248
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
++ LP+ LT Q A++EI+ D++QP MNRLLQGDVG GKTV+A +A + SG+
Sbjct: 249 REFAAGLPFELTDGQKKAVNEILHDMRQPYCMNRLLQGDVGSGKTVIAAIALYAAVKSGH 308
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q A M PTE+LA QH L KL H ++ALLTGS +Q R + LQ G I
Sbjct: 309 QGALMAPTEILAEQHLRTLEKLF-----KPHGIQVALLTGSLTERQRRDVLAGLQMGMID 363
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+V+GTH+LI E V F +L L + DEQ RFGV QR K +
Sbjct: 364 VVVGTHALIQEDVHFRSLSLVVTDEQHRFGVGQRSILRRKGIH----------------- 406
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
P VL M+ATPIPRTLA+ +GDM ++ + + P GR+PIKTY +
Sbjct: 407 ------PDVLTMTATPIPRTLAITAFGDMDVSTLRERPKGRVPIKTYWV 449
>gi|358067392|ref|ZP_09153871.1| hypothetical protein HMPREF9333_00752 [Johnsonella ignava ATCC
51276]
gi|356694308|gb|EHI55970.1| hypothetical protein HMPREF9333_00752 [Johnsonella ignava ATCC
51276]
Length = 724
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 148/364 (40%), Positives = 192/364 (52%), Gaps = 44/364 (12%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
P+Y GGL+ + I + + D +P I ++ LL L A IH P +E
Sbjct: 152 PVYGLTGGLSGKTVIKAIKNVSYIVESIRDYLPDSIRIKYNLLSLGHALRQIHNPLSEEE 211
Query: 444 ADLARKRLIFDEFFYLQLGRLYQ--MLEG----------LGTQFEKEGLLDKYRKPRLNA 491
ARKRL FD+FF LY +L+ L + E L K +
Sbjct: 212 ILNARKRLAFDDFFLF----LYNISLLKNERKNIKSSYILSYRLIGENYLKKESTGYEDT 267
Query: 492 AYMEGWSSL-----TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKT 546
EG +L ++ L+ALPYSLTS+Q ++EI+ D+ M+RL+QGDVG GKT
Sbjct: 268 GSCEGAYNLHNYIFIEEYLKALPYSLTSAQHRVMTEILSDMSSKRQMHRLIQGDVGSGKT 327
Query: 547 VVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVK 606
VAF A G+Q A MVPTE+LA QHY+ LL ++ NM K+ PK ALLTGS P K
Sbjct: 328 AVAFGAIFAAYSCGFQGAVMVPTEILACQHYKFLLSVISNM---KNPPKTALLTGSVPKK 384
Query: 607 QSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTS 666
+ I + ++ DI +VIGTH++I E VEFS L + + DEQ RFGV QR LY
Sbjct: 385 EKLAIYELIKNHDIDIVIGTHAVIQEGVEFSKLAVVVTDEQHRFGVKQR----QSLYNKG 440
Query: 667 MSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIK 726
S M PHVL MSATPIPRTLAL LYGDM + I P GR+P+K
Sbjct: 441 SDSVM----------------PHVLVMSATPIPRTLALILYGDMDSSVIDTKPEGRLPVK 484
Query: 727 TYII 730
+I
Sbjct: 485 NVVI 488
>gi|257866567|ref|ZP_05646220.1| ATP-dependent DNA helicase RecG [Enterococcus casseliflavus EC30]
gi|257872917|ref|ZP_05652570.1| ATP-dependent DNA helicase RecG [Enterococcus casseliflavus EC10]
gi|257800525|gb|EEV29553.1| ATP-dependent DNA helicase RecG [Enterococcus casseliflavus EC30]
gi|257807081|gb|EEV35903.1| ATP-dependent DNA helicase RecG [Enterococcus casseliflavus EC10]
Length = 676
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 171/529 (32%), Positives = 253/529 (47%), Gaps = 97/529 (18%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIG 264
+L++ ++ + G+ ++ L + G T+ LL ++P Y D+Q Q+ ++ D + G
Sbjct: 1 MLNQPLTVLKGVGEKRAQDLASLGIETIEDLLKYYPFRYEDIQERQLAEIQDQEKVTIKG 60
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK---FFRG 321
++S VVN +K ++ + + F
Sbjct: 61 IVVSP-----------------------------PVVNRFGYKKSRLQFRMMQDHDVFNV 91
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
+ F P+LK K +V E + V GK A R + I K +D +
Sbjct: 92 SFFNQ-PYLKD---KVEVSEEIAVYGKWDAKRKG----LTGIKILGSKSAEDFA------ 137
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKH 440
PIY + S+L + I +A + P + +++ LL A +H PK
Sbjct: 138 --PIYHVNKAVRQSVLIELIKQAFLDFGDQITEILPLSLIEKYRLLDRKSAMFAMHFPKD 195
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGL--GTQFEKEGLLDKYRKPRLNAAYMEGWS 498
E+ A++R+IF+EFF Q+ ++GL + EK GL Y RL
Sbjct: 196 PQESHQAKRRVIFEEFFLFQM-----QIQGLKKSEKAEKNGLAIDYDVQRL--------- 241
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
K+ R LP+ LT++Q +EI DLK P M RLLQGDVG GKTVVA +A +
Sbjct: 242 ---KEFTRKLPFELTNAQKRVTNEICHDLKSPQHMQRLLQGDVGSGKTVVAAIALYATMT 298
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+G+Q A MVPTE+LA QH E L +L D +E ALLTGST K+ R+I + L G
Sbjct: 299 AGFQGALMVPTEILAQQHLESLNQLFDPLE-----VTTALLTGSTKPKERRVILEQLAAG 353
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+I +++GTH+LI E V+F+ L L I DEQ RFGV QR K Y
Sbjct: 354 EIDIIVGTHALIQEGVDFAHLGLVITDEQHRFGVNQRKVLREKGYL-------------- 399
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLA+ YG+M ++ I ++P GRIP++T
Sbjct: 400 ---------PDVLFMTATPIPRTLAITAYGEMDVSVIDEMPAGRIPVET 439
>gi|288572872|ref|ZP_06391229.1| ATP-dependent DNA helicase RecG [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288568613|gb|EFC90170.1| ATP-dependent DNA helicase RecG [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 687
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 180/535 (33%), Positives = 247/535 (46%), Gaps = 85/535 (15%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGE 265
+LD I + G+ +LE G TL LL FPR Y D +
Sbjct: 3 VLDSSIRYLNGVGPVKASRLERLGVRTLGDLLFFFPRRYEDRRR---------------- 46
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDS--GQKKKIYLHLKKFFRGTR 323
I+S + ++ ADT S VV+ DS KK+I L G
Sbjct: 47 IVSLKDLQ----------------ADTVAASIVTVVSTDSRLSVKKRISLTRAIVSDGHG 90
Query: 324 FTSIPFL--KSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
S + K ++ G + + GKV + E+ I ED++ ++ G
Sbjct: 91 LASALWFNRKGLDRLLTSGTRLALYGKVAKEGGMAQFVAPEFEI---LGEDEVPVQIGG- 146
Query: 382 PYPIYPSKGGLNASLLRDTIARAL-QALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKH 440
+Y GL+ LR I R L Q LP D +P+ + ++ L L A +H P
Sbjct: 147 IVAVYSLTAGLSDRWLRKIIHRLLDQVLPELEDHMPESLLRDLDLEPLGPAIREMHCPVS 206
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ AR+RL FDE F LQ +G + + + PRL L
Sbjct: 207 PESWKRARRRLAFDELFMLQ----------VGLAIRRRSVGELRGAPRLPLG-----GPL 251
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
+K+ +LP+ LT Q ++EI D+ V MNRLLQGDVG GKT VA LA M+ + G
Sbjct: 252 RRKIEHSLPFELTEDQSRVLAEIGRDMSSDVTMNRLLQGDVGSGKTAVATLAMMQAVDGG 311
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
QAA MVPT +LA QH L L + H K+ LLTG K+ + + K++ G I
Sbjct: 312 TQAALMVPTSILAQQHAIRLRSFL-----EPHGVKVGLLTGGLSAKERKALLKEIAEGSI 366
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
LVIGTH++I E V F L L ++DEQ RFGV+QRG K
Sbjct: 367 DLVIGTHAVIQEDVVFRRLGLIVIDEQHRFGVLQRGALGGK------------------- 407
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
PHVL M+ATPIPRTLAL++YGD+S++ I +P GRIP+KT I G+ K
Sbjct: 408 ----GEMPHVLVMTATPIPRTLALSVYGDLSVSVIRTMPEGRIPVKTRWI-GDHK 457
>gi|433446065|ref|ZP_20410196.1| ATP-dependent DNA helicase RecG [Anoxybacillus flavithermus
TNO-09.006]
gi|432000810|gb|ELK21702.1| ATP-dependent DNA helicase RecG [Anoxybacillus flavithermus
TNO-09.006]
Length = 682
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 168/539 (31%), Positives = 259/539 (48%), Gaps = 103/539 (19%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYAD-----LQNAQIDLDDGQYF 260
+L + ++ + G+ + L G T+ +LL+HFP Y D L+ A+ D +
Sbjct: 4 VLHQSVTAIKGIGEETAAALHEMGIDTIEQLLYHFPFRYEDYRICALEEAKHD----EKI 59
Query: 261 IFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHL--KKF 318
IG++ S + V+ S +K ++ + +F
Sbjct: 60 TIIGKVYS-----------------------------EPVLTYYSRKKSRLTFRVLVDRF 90
Query: 319 FRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRA 378
+ P+LK K + E V ++GK R +++ +I +K + ++
Sbjct: 91 LVTAVCFNQPYLKK---KLTLHETVTITGKWDKHRQT--ITVQQLHIGEMKRQKEIE--- 142
Query: 379 KGRPYPIYPSKGGLNASLLRDTIARALQAL-PANFDPVPKEITQEFGLLCLFDAYMGIHQ 437
P+Y ++G L +R IA ALQ A DP+P E+ Q + L+ DA IH
Sbjct: 143 -----PVYSTRGDLTVKGMRRFIALALQQYGDAIVDPLPSELLQTYRLISKRDAIRVIHM 197
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRK---PRLNAAYM 494
P ++ AR+RL+++EF QL K L KYR+ P + +
Sbjct: 198 PLSHEQLKQARRRLVYEEFLLFQL---------------KMQALKKYRREQSPGIAHRFS 242
Query: 495 EGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACM 554
+G + +++LP+ LT++Q + EI+ DLK P MNRLLQGDVG GKTVVA +A
Sbjct: 243 DGQ---LQSFIQSLPFPLTNAQQRVVREIVQDLKSPYRMNRLLQGDVGSGKTVVAAIALY 299
Query: 555 EVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKD 614
V SGYQ A MVPTE+LA QH E L LL+ M ++ LLT S K+ + + +
Sbjct: 300 AVYLSGYQGALMVPTEILAEQHAESLRALLEPM-----GIRVELLTSSVKGKRRKQLLEQ 354
Query: 615 LQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMV 674
L GD+ +V+GTH+LI + V F+ L + I DEQ RFGV QR K
Sbjct: 355 LALGDVHVVVGTHALIQDDVNFAKLGVVITDEQHRFGVEQRRILREK------------- 401
Query: 675 NSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN 733
+P VL M+ATPIPRTLA+ +G+M ++ I ++P GR I+TY ++ +
Sbjct: 402 ----------GQSPDVLFMTATPIPRTLAITAFGEMDVSIIDEMPKGRKKIETYWVKHD 450
>gi|335040141|ref|ZP_08533277.1| ATP-dependent DNA helicase RecG [Caldalkalibacillus thermarum
TA2.A1]
gi|334179966|gb|EGL82595.1| ATP-dependent DNA helicase RecG [Caldalkalibacillus thermarum
TA2.A1]
Length = 691
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 173/542 (31%), Positives = 256/542 (47%), Gaps = 112/542 (20%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L + ++ + G+ + L L G T+ LL HFP Y D + + + + +
Sbjct: 12 LKQPVTTLKGVGEALAEDLSLLGIKTIEDLLFHFPYRYDDCRPKDLAEVGHEETVTVEGT 71
Query: 267 ISSRGM-------KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFF 319
+ S + KA CSF +V+VG YL F
Sbjct: 72 VHSEPVLRFYGRNKARCSF---KVLVGR------------------------YLITAVIF 104
Query: 320 RGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMR---SNNHYEMREYNIDVLKDEDDLSL 376
+ P++K + KVG + ++GK+ R + HY+ D S
Sbjct: 105 ------NRPYVKQ---QVKVGRSIRLTGKIDKHRLQLTVQHYQW----------SDTASN 145
Query: 377 RAKGRPYPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGI 435
+ + P+Y G L + LR + AL+ A + +P+ + + LL +A I
Sbjct: 146 KGEETLLPVYSVTGKLKVAQLRKWMKAALRDYAAYIPEMIPQSLLTRYKLLPRPEALRKI 205
Query: 436 HQPKHIDEADLARKRLIFDEFFYLQLG------RLYQMLEGLGTQFEKEGLLDKYRKPRL 489
H PK +E A++R I++EFF QL R + +EG+ ++++ +
Sbjct: 206 HFPKDYEEGKQAKRRFIYEEFFLFQLKMQALRKRHREQVEGIPQHYDQQKV--------- 256
Query: 490 NAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVA 549
+ +R+LP+ LT++Q A+ +I+ DLK P MNRLLQGDVG GKTVVA
Sbjct: 257 ------------ENFIRSLPFELTAAQRKALDQILHDLKSPFAMNRLLQGDVGSGKTVVA 304
Query: 550 FLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSR 609
++ I +GYQ AFMVPTE+LA QHY L + N +IALLTGS+ K+ R
Sbjct: 305 AISLYASISAGYQGAFMVPTEILAEQHYLSLKQFYRN-----ENIQIALLTGSSTPKERR 359
Query: 610 MIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSS 669
I LQ G I LV+GTH+LI + V F L L I DEQ RFGV QR + K
Sbjct: 360 EILAGLQLGTIDLVVGTHALIQKDVYFKNLGLIITDEQHRFGVEQRRQLRRK-------- 411
Query: 670 GMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYI 729
G+ AP VL M+ATPIPRTLA+ +GD+ +T I +LP GR ++TY
Sbjct: 412 --------GA-------APDVLLMTATPIPRTLAITAFGDLDVTVIDELPAGRKKVETYW 456
Query: 730 IE 731
++
Sbjct: 457 VK 458
>gi|294793852|ref|ZP_06758989.1| ATP-dependent DNA helicase RecG [Veillonella sp. 3_1_44]
gi|294455422|gb|EFG23794.1| ATP-dependent DNA helicase RecG [Veillonella sp. 3_1_44]
Length = 680
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 164/531 (30%), Positives = 251/531 (47%), Gaps = 83/531 (15%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFIG 264
+D+ ++ + G+ QL G + LL +FPRTY D + DL G +G
Sbjct: 1 MDERLTTIKGIGPGREKQLHKLGITNVTSLLTYFPRTYEDRRTIYSIGDLKSGMTGGVVG 60
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
+I+ + + S LEV+ IAD T ++V + G KK Y
Sbjct: 61 TVIAVQEKRPRPRLSILEVV----IADG--TGPLKIVLFNQGYKKNFY------------ 102
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
K G+ + GK + Y + N +++ D +G P
Sbjct: 103 -------------KKGQRIYAYGK-----AEFQYGYMQMNTPQMENLGDGGEPDRG-IVP 143
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
IY G++ ++R T+ A + +P E+ ++ + +DA+ +H P +
Sbjct: 144 IYALADGVSQFVVRSTVRNWFAANHELPEILPVEVREDHHYMSRYDAFKMMHFPDSSELY 203
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
+ AR +L ++E F +Q G L + ++ + M L +
Sbjct: 204 EKARYQLAYEELFVMQAGLA----------------LLRNKEQCHRGSKMGPNGELMAQC 247
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
+ LP+SLT Q A+ +I D++ PM RLLQGDVG GKT+VA L+ ++ I +GYQ A
Sbjct: 248 IENLPFSLTGDQQRALEDIRIDMEDERPMQRLLQGDVGSGKTIVATLSLLKAIENGYQGA 307
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
M PTE+LA QHYE + + N+ I LLTGS+ K+ I + L G I ++I
Sbjct: 308 LMAPTEILAAQHYEGIRTVCANL-----GITIELLTGSSTKKEKECIYEGLADGRIQMII 362
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+LI E V F L L I+DEQ RFGV QR R K Y
Sbjct: 363 GTHALIQEGVNFHNLGLVIIDEQHRFGVDQRARLQQKGTY-------------------- 402
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
PHVL M+ATPIPRT+ L++YGD++++ I ++PPGR P+KTY ++ + K
Sbjct: 403 ---PHVLIMTATPIPRTMTLSVYGDLAVSLIKEMPPGRKPVKTYAVDSSYK 450
>gi|322434362|ref|YP_004216574.1| ATP-dependent DNA helicase RecG [Granulicella tundricola MP5ACTX9]
gi|321162089|gb|ADW67794.1| ATP-dependent DNA helicase RecG [Granulicella tundricola MP5ACTX9]
Length = 779
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 187/559 (33%), Positives = 267/559 (47%), Gaps = 97/559 (17%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L I V + R+ L G T+ LL+H P Y D N + LD
Sbjct: 5 LSTPIQFVKRVGDRVAENLARRGVETVEDLLYHLPFRYEDRLNPK-PLDQ---------- 53
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
MK G S L + G + TT G + + G + L + G R S
Sbjct: 54 -----MKPGEMASLLGDVRGSTLL---TTRGPAIFELTLGL---VPLGAEGLGFGGRI-S 101
Query: 327 IPFLKSI-------EGKHKVGEFVCVSGKVRAMRS--NNHYEMREYNIDVLKD------E 371
P +K + + ++G+ V V GK+ A RS + +++ + ++L +
Sbjct: 102 QPTIKCLWFNGTYLRERFRLGQQVAVYGKLEASRSGGSGRFKLIQPQFEILPGPGASGPD 161
Query: 372 DDLSLRAKGRPYPIYPSKGG-------LNASLLRDTIARALQALPANF----DPVPKEIT 420
+ + GR P+Y S GG L + R + + L + + +P +
Sbjct: 162 AEFAALEMGRIVPVYESLGGTTPWGAKLTSKWTRRVMWSVFEELIESGAEIEETLPAPLR 221
Query: 421 QEFGLLCLFDAYMGIHQPKH-IDEADL------ARKRLIFDEFFYLQLG---RLYQMLEG 470
+ L +A IH P+ ADL KRLIF+EFFYL+LG + ++ E
Sbjct: 222 ERLALPNRLEALKSIHFPEAGTPVADLMTARTPGHKRLIFEEFFYLELGLELKRRKLRER 281
Query: 471 LGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQP 530
+GT+FE D+ R + + LP+ T++Q ++EI+ D+K+
Sbjct: 282 IGTRFET---TDQVRA----------------AIRQVLPFHPTTAQKRVLAEIVGDMKKD 322
Query: 531 VPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLL-DNMEE 589
PM RLLQGDVG GKT+VA A + I +G+QAA M PTE+LATQHY KLL D +
Sbjct: 323 QPMRRLLQGDVGSGKTIVAMQAALVAIENGFQAALMAPTEILATQHYLSARKLLADKLSP 382
Query: 590 DKHKP-KIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQ 648
KP ++ LLTGS + + R R + G+ L IGTH+LI EKV+F+ L L IVDEQ
Sbjct: 383 LTGKPYRVTLLTGSLDLDRKRESRGRIMRGEAHLAIGTHALIEEKVDFANLGLVIVDEQH 442
Query: 649 RFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYG 708
RFGV QR + M N++G D P VL M+ATPIPRTLAL +YG
Sbjct: 443 RFGVQQRFKL------------MKKPNAEGVMAD-----PDVLVMTATPIPRTLALTIYG 485
Query: 709 DMSLTQITDLPPGRIPIKT 727
DM ++ I +LPPGR PI T
Sbjct: 486 DMDVSVIDELPPGRTPIVT 504
>gi|296133598|ref|YP_003640845.1| ATP-dependent DNA helicase RecG [Thermincola potens JR]
gi|296032176|gb|ADG82944.1| ATP-dependent DNA helicase RecG [Thermincola potens JR]
Length = 808
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/401 (34%), Positives = 209/401 (52%), Gaps = 57/401 (14%)
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRD 399
G+ + VSGKV + ++ + +V+ D D++ + GR P+Y GL + R
Sbjct: 228 GKELIVSGKVD--KKFGQVQITVADFEVVDDSDNVHV---GRIVPVYSVTEGLPQRVFRT 282
Query: 400 TIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFY 458
+ + + +P+P I + + L + +A IH P+ + + AR+RL FDE
Sbjct: 283 IMKNLIDSFGDRLAEPLPDSIRRRYDLPSINEALRNIHFPEDWNCIEEARRRLAFDELLV 342
Query: 459 LQLG----RLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTS 514
LQLG ++ Q+ + G +K G L K+ + LP+ LT
Sbjct: 343 LQLGLASMKISQLRKVRGIAHKKHG-------------------PLMKRFMDNLPFPLTK 383
Query: 515 SQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLAT 574
+Q + I D++ P PMNRLLQGDVG GKT+V+ A ++ + SGYQ M PTE+LA
Sbjct: 384 AQQRVLESIYRDMESPKPMNRLLQGDVGSGKTIVSAAALIKTVESGYQGVLMAPTEILAE 443
Query: 575 QHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKV 634
QHY L +L + K++LLTGS K+ + +D+ G +VIGTH++I ++V
Sbjct: 444 QHYLGLRELFAPL-----GVKVSLLTGSISNKEKEAVLQDISQGRTDIVIGTHAVIQDEV 498
Query: 635 EFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMS 694
F L LAI DEQ RFGV QR R K +Y P VL M+
Sbjct: 499 VFQKLGLAITDEQHRFGVKQRARLQQKGHY-----------------------PDVLVMT 535
Query: 695 ATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
ATPIPRTLA+ +YGD+ ++ I +LPPGR P+KT+ + N++
Sbjct: 536 ATPIPRTLAMTVYGDLDVSVIDELPPGRQPVKTFWVTENKR 576
>gi|270308438|ref|YP_003330496.1| ATP-dependent DNA helicase [Dehalococcoides sp. VS]
gi|270154330|gb|ACZ62168.1| ATP-dependent DNA helicase [Dehalococcoides sp. VS]
Length = 818
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 168/568 (29%), Positives = 261/568 (45%), Gaps = 92/568 (16%)
Query: 186 NESSTSSEVGSLPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYA 245
+++ ++++ + P P LD IS V G+S + G T+R LL++FP +
Sbjct: 99 SKAKSTAKTPASPKTDGCPPALDGDISLVKGISAATAPKFHKMGINTVRDLLYYFPNRHL 158
Query: 246 DLQNAQ--IDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNI 303
D + L+ G I + S+ G S TE GD
Sbjct: 159 DYSRLKKISQLEAGSEQTIIANVWQSKVNYMGGRRS------------TEAVLGD----- 201
Query: 304 DSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREY 363
D+G + ++ + R K V +SG+V +E E+
Sbjct: 202 DTGNMRAVWFNNPYMVRNL---------------KPNARVVLSGRVSIFNGRPVFESPEW 246
Query: 364 NIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQ-ALPANFDPVPKEITQE 422
+ L DE DL GR P+YP GL+ LR + + + P D +P++ +
Sbjct: 247 --EELPDEADLI--HTGRLVPVYPLTAGLHQRSLRRLMKNFIDISTPGISDFLPEDTLKR 302
Query: 423 FGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLD 482
LL L +A H P + D AR RL FDE F LQLG L + E+ G
Sbjct: 303 NRLLPLAEAIRQAHFPDTEELKDTARNRLAFDELFILQLGVLAKKKRWQ----EQTGRAL 358
Query: 483 KYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVG 542
K P ++ + LP+ LT +Q +++I D+ + VPM+RLLQG+VG
Sbjct: 359 KVNLPAID------------HFISRLPFKLTDAQTKCLADIKADISKNVPMSRLLQGEVG 406
Query: 543 CGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDK----------- 591
GKT+VA ++ +G Q AFM PTE+LA QH++ + +L ++ +
Sbjct: 407 SGKTIVAVISLFTAAANGLQGAFMAPTEILAEQHFKSVTRLFASIAKVSTLLDGVHTFEG 466
Query: 592 ---HKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQ 648
H ++AL+ Q ++++ ++ G+I + IGTH+LI +++ F +L LA++DEQ
Sbjct: 467 LLDHPLRVALMISDMKSSQKDILKEKIKKGEIDIAIGTHALIQKEIRFKSLGLAVIDEQH 526
Query: 649 RFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYG 708
RFGV QR SK + PH+L M+ATPIPRTLAL LYG
Sbjct: 527 RFGVEQRSALKSK-----------------------GLNPHILIMTATPIPRTLALTLYG 563
Query: 709 DMSLTQITDLPPGRIPIKTYIIEGNEKG 736
D+ L+ I +LPPGR IKT ++ ++
Sbjct: 564 DLDLSVIDELPPGRQSIKTRWLKPEQRN 591
>gi|402838367|ref|ZP_10886876.1| ATP-dependent DNA helicase RecG [Eubacteriaceae bacterium OBRC8]
gi|402273398|gb|EJU22600.1| ATP-dependent DNA helicase RecG [Eubacteriaceae bacterium OBRC8]
Length = 672
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 160/533 (30%), Positives = 260/533 (48%), Gaps = 105/533 (19%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L+ + +P + ++ L+N G T+ LLH+FPR Y +D F + EI
Sbjct: 3 LNDNVINLPKIGEKKQKVLQNMGVSTIYDLLHYFPRKY----------EDRSIFKKLNEI 52
Query: 267 ISSR--GMKAG------CSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKF 318
+ +KA + F + I+ ++D +T+ ++ N
Sbjct: 53 KAKEKASVKAKIIRFEKVNLKFKKSIINIYVSDDTSTACIKLFN---------------- 96
Query: 319 FRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRA 378
F +P L+ G ++ G ++ +Y++ ++N + E D + +
Sbjct: 97 ---NNFI-LPELEK-------GRYIFFYG-----QAEENYDLLQFNSPEI--EFDKAEKK 138
Query: 379 KGRPYPIYPSKGGLNASLLRDTIARALQ-ALPANFDPVPKEITQEFGLLCLFDAYMGIHQ 437
G YPIYP G+ S + + +++ A + + +P E +++ L+ +DA IH
Sbjct: 139 IGMIYPIYPLSNGIKNSEILSAVKYSIENADMTSLEYLPNEYLEKYRLIPTYDAIKNIHM 198
Query: 438 PKHIDEADLARKRLIFDEFFYLQL---GRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYM 494
PK+I+ +R R IF+EFF L + + + + +G +F+K
Sbjct: 199 PKNINILKQSRYRCIFNEFFELNIFLNAQKSNVQKSVGIKFKKS---------------- 242
Query: 495 EGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACM 554
E + + KKL P+ LT++Q + +I D+ + VPM RL+QGDVG GKT+VAFL+
Sbjct: 243 ENINDIIKKL----PFELTNAQKKVLDDIFSDMNKDVPMRRLIQGDVGSGKTIVAFLSIY 298
Query: 555 EVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKD 614
+GYQ+AFMVPTE+LA QHYE+ L N + K+ LL GST K + ++
Sbjct: 299 NSCMNGYQSAFMVPTEVLAVQHYENALDFFKNTD-----IKVKLLIGST--KNKAKLYEE 351
Query: 615 LQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMV 674
++ G++ +VIGT +LI EKV F L L I DEQ RFGV QR + K
Sbjct: 352 IENGEVDVVIGTQALIQEKVVFKNLGLVITDEQHRFGVNQRKKLEEK------------- 398
Query: 675 NSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ P ++ MSATPIPRTL+L ++ D+ ++ I +LP R+PIKT
Sbjct: 399 ---------SNANPDIIVMSATPIPRTLSLVIHKDLDVSVIGELPQNRLPIKT 442
>gi|289450213|ref|YP_003474687.1| ATP-dependent DNA helicase RecG [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289184760|gb|ADC91185.1| ATP-dependent DNA helicase RecG [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 718
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 175/565 (30%), Positives = 276/565 (48%), Gaps = 84/565 (14%)
Query: 190 TSSEVGSLPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN 249
T+S ++ + I+P+ ++ + G+S + + T R LL+++PR Y D
Sbjct: 4 TNSAPEAITANRKIDPV--GSVTQLAGVSAKRAALMARLNINTCRDLLNYWPRRYEDWAT 61
Query: 250 AQI--DLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQ 307
D++ Q + I+ ++ S+L V +AD + D++
Sbjct: 62 LSTLADIEPEQEVTVLARCITMPHLQYKGKLSYLRV----GLAD----ASDQL------- 106
Query: 308 KKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHY-----EMRE 362
G + + P+L++ KV F K R + N E+ E
Sbjct: 107 -------------GVIWFNQPYLETQLDIDKVYLFHGTISKNRPLSLQNPAFTPVPELAE 153
Query: 363 YNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANF---DPVPKEI 419
++ +K S A P+YP GL +LR+ I + L A+ D +P ++
Sbjct: 154 APLNTIKP----SALANTFIRPVYPLTAGLTQGVLRNLIRQCLTAMREQLEREDYLPLKM 209
Query: 420 TQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEG 479
Q L A IH P +++ +AR+RL+F+E F++QLG Q K+
Sbjct: 210 RQRQHLTTYVYAVEHIHFPTCLEDYTIARERLVFEELFFMQLG----------LQLLKKR 259
Query: 480 LLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQG 539
L+ P +N + + + ++ ALPY LT +Q++A+ +I DL +PM+RL+QG
Sbjct: 260 RLNGQTAPIINLD--KTAETKYQAVVNALPYRLTKAQIAALQDISTDLAVGIPMDRLVQG 317
Query: 540 DVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALL 599
DVG GKT+VA LA + +GYQ M PT +LA QHY ++ LL + K+ALL
Sbjct: 318 DVGSGKTIVAALALYRTVLAGYQGLLMAPTGILAEQHYNNISSLL-----TPYGIKVALL 372
Query: 600 TGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFN 659
TG T R I + L TG+I L+IGT +++ + ++ L + DEQ RFGV QR
Sbjct: 373 TGKTKGAAKRQITQALSTGEIDLLIGTQAILNDNLQMLHPGLVVTDEQHRFGVNQR---- 428
Query: 660 SKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLP 719
+AM+ +D+Q PHVL MSATPIPR+LAL LYGD+S++ I +LP
Sbjct: 429 -----------LAMIKR----QDEQR--PHVLVMSATPIPRSLALVLYGDLSISIIDELP 471
Query: 720 PGRIPIKTYIIEGN--EKGYENVYK 742
PGR+PIKTY + E+ Y ++K
Sbjct: 472 PGRLPIKTYTVGSADLERAYALIHK 496
>gi|420261512|ref|ZP_14764156.1| ATP-dependent DNA helicase RecG [Enterococcus sp. C1]
gi|394771446|gb|EJF51207.1| ATP-dependent DNA helicase RecG [Enterococcus sp. C1]
Length = 676
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 171/529 (32%), Positives = 253/529 (47%), Gaps = 97/529 (18%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIG 264
+L++ ++ + G+ ++ L + G T+ LL ++P Y D+Q Q+ ++ D + G
Sbjct: 1 MLNQPLTVLKGVGEKRAQDLASLGIETIEDLLKYYPFRYEDIQERQLAEIQDQEKVTIKG 60
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK---FFRG 321
++S VVN +K ++ + + F
Sbjct: 61 IVVSP-----------------------------PVVNRFGYKKSRLQFRMMQDHDVFNV 91
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
+ F P+LK K +V E + V GK A R + I K +D +
Sbjct: 92 SFFNQ-PYLKD---KVEVSEEIAVYGKWDAKRKG----LTGMKILGSKSGEDFA------ 137
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKH 440
PIY + S+L + I +A + P + +++ LL A +H PK
Sbjct: 138 --PIYHVNKAVRQSVLIELIKQAFLDFGDQITEILPLSLIEKYRLLDRKSAMFAMHFPKD 195
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGL--GTQFEKEGLLDKYRKPRLNAAYMEGWS 498
E+ A++R+IF+EFF Q+ ++GL + EK GL Y RL
Sbjct: 196 PQESHQAKRRVIFEEFFLFQM-----QIQGLKKSEKAEKNGLAIDYDVQRL--------- 241
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
K+ R LP+ LT++Q +EI DLK P M RLLQGDVG GKTVVA +A +
Sbjct: 242 ---KEFTRKLPFELTNAQKRVTNEICHDLKSPQHMQRLLQGDVGSGKTVVAAIALYATMT 298
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+G+Q A MVPTE+LA QH E L +L D +E ALLTGST K+ R+I + L G
Sbjct: 299 AGFQGALMVPTEILAQQHLESLNQLFDPLE-----VTTALLTGSTKPKERRVILEQLAAG 353
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+I +++GTH+LI E V+F+ L L I DEQ RFGV QR K Y
Sbjct: 354 EIDIIVGTHALIQEGVDFAHLGLVITDEQHRFGVNQRKVLREKGYL-------------- 399
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLA+ YG+M ++ I ++P GRIP++T
Sbjct: 400 ---------PDVLFMTATPIPRTLAITAYGEMDVSVIDEMPAGRIPVET 439
>gi|433655107|ref|YP_007298815.1| ATP-dependent DNA helicase RecG [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293296|gb|AGB19118.1| ATP-dependent DNA helicase RecG [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 682
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 172/526 (32%), Positives = 258/526 (49%), Gaps = 83/526 (15%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L K I V G+ + L+ G T++ L ++P+ Y + + I +D + IGE
Sbjct: 3 LSKSIQYVKGVGPKRALLLKKIGIETVKDALEYYPKEYENREKI-IPID----MLKIGEK 57
Query: 267 ISSRGMKAGCSFSF-LEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFT 325
+ + AG + + ++ + +I + + E+V +
Sbjct: 58 QTFKAYIAGKAREYKVKRLTITKIPVKDGSGAVELV----------------------WY 95
Query: 326 SIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPI 385
+ P++K G K+GE ++GKV + E V+ D L++ A GR PI
Sbjct: 96 NQPYIK---GNFKLGEEYIINGKVSYKYGQIYVEN-----PVMDRSDSLNINA-GRIVPI 146
Query: 386 YPSKGGLNASLLRDTIARALQALPANFDPVPKE-ITQEFGLLCLFDAYMGIHQPKHIDEA 444
Y GL+ ++R I L+ + + + E +E+ LL + A IH P+
Sbjct: 147 YKLTEGLSQKVIRSIIFNLLKEYLNDIEEIFDENFLKEYNLLDIKSAIKNIHFPESSKML 206
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
+ ++ RL+F EFF LQLG L + ++ + K+R+ L K
Sbjct: 207 ERSKYRLVFQEFFILQLG-----LTLIKNRYNTDKAGIKFRRVDL------------KDF 249
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
L + LT +Q A++EI+ D+ MNRLLQGDVG GKTV+A A + +GYQA+
Sbjct: 250 FSKLKFHLTQAQERALNEILDDMYSGKVMNRLLQGDVGSGKTVIAAAAMYVAVKNGYQAS 309
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
M PTE+LA QHY L +L D ++ KI LLTGS K+ +I ++++ G+I +++
Sbjct: 310 IMAPTEILAKQHYFTLKELYDELD-----IKIELLTGSIGTKKKNIIIEEIKNGEIDILV 364
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTHSLI E V+F L LAI DEQ RFGV QR F K G D
Sbjct: 365 GTHSLIEENVQFKNLGLAITDEQHRFGVRQRAVFKEK----------------GEQTD-- 406
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
VL M+ATPIPRTLAL LYGD+ ++ I +LPPGR I+TY I
Sbjct: 407 -----VLVMTATPIPRTLALMLYGDLDISVIDELPPGRKKIETYAI 447
>gi|363894779|ref|ZP_09321845.1| ATP-dependent DNA helicase RecG [Eubacteriaceae bacterium ACC19a]
gi|361961471|gb|EHL14670.1| ATP-dependent DNA helicase RecG [Eubacteriaceae bacterium ACC19a]
Length = 672
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 160/533 (30%), Positives = 260/533 (48%), Gaps = 105/533 (19%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L+ + +P + ++ L+N G T+ LLH+FPR Y +D F + EI
Sbjct: 3 LNDNVINLPKIGEKKQKVLQNMGVSTIYDLLHYFPRKY----------EDRSIFKKLNEI 52
Query: 267 ISSR--GMKAG------CSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKF 318
+ +KA + F + I+ ++D +T+ ++ N
Sbjct: 53 KAKEKASVKAKIIRFEKVNLKFKKSIINIYVSDDTSTACIKLFN---------------- 96
Query: 319 FRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRA 378
F +P L+ G ++ G ++ +Y++ ++N + E D + +
Sbjct: 97 ---NNFI-LPELEK-------GRYIFFYG-----QAEENYDLLQFNSPEI--EFDKAEKK 138
Query: 379 KGRPYPIYPSKGGLNASLLRDTIARALQ-ALPANFDPVPKEITQEFGLLCLFDAYMGIHQ 437
G YPIYP G+ S + + +++ A + + +P E +++ L+ +DA IH
Sbjct: 139 IGMIYPIYPLSNGIKNSEILSAVKYSIENADMTSLEYLPNEYLEKYRLIPTYDAIKNIHM 198
Query: 438 PKHIDEADLARKRLIFDEFFYLQL---GRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYM 494
PK+I+ +R R IF+EFF L + + + + +G +F+K
Sbjct: 199 PKNINILKQSRYRCIFNEFFELNIFLNAQKSNVQKSVGIKFKKS---------------- 242
Query: 495 EGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACM 554
E + + KKL P+ LT++Q + +I D+ + VPM RL+QGDVG GKT+VAFL+
Sbjct: 243 ENINDIIKKL----PFELTNAQKKVLDDIFSDMNKDVPMRRLIQGDVGSGKTIVAFLSIY 298
Query: 555 EVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKD 614
+GYQ+AFMVPTE+LA QHYE+ L N + K+ LL GST K + ++
Sbjct: 299 NSCMNGYQSAFMVPTEVLAVQHYENALDFFKNTD-----IKVKLLIGST--KNKAKLYEE 351
Query: 615 LQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMV 674
++ G++ +VIGT +LI EKV F L L I DEQ RFGV QR + K
Sbjct: 352 IENGEVDVVIGTQALIQEKVVFKNLGLVITDEQHRFGVNQRKKLEEK------------- 398
Query: 675 NSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ P ++ MSATPIPRTL+L ++ D+ ++ I +LP R+PIKT
Sbjct: 399 ---------SNANPDIIVMSATPIPRTLSLVIHKDLDVSVIGELPQNRLPIKT 442
>gi|313892557|ref|ZP_07826144.1| ATP-dependent DNA helicase RecG [Dialister microaerophilus UPII
345-E]
gi|313118954|gb|EFR42159.1| ATP-dependent DNA helicase RecG [Dialister microaerophilus UPII
345-E]
Length = 678
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 163/528 (30%), Positives = 249/528 (47%), Gaps = 85/528 (16%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNA--QIDLDDGQYFIFIG 264
L+ + V G+ +++ +L T+ L++ FPR Y D D+ G+ + G
Sbjct: 3 LEDSVMKVKGVGPKMFEKLGKLNIKTVEDLINFFPRKYQDWSKITPMEDIVIGEECLIYG 62
Query: 265 EI--ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGT 322
+I I R ++ G L VI+ I T ++ S +KK+
Sbjct: 63 KIVKIDERILRRG--MRLLSVILTDNINSVTLTYFNQ-----SWKKKQF----------- 104
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
+ E + GKV + Y++ I+ + E+ L+ +
Sbjct: 105 ---------------NINEEILAYGKVEYLYG--KYQISNAEIEAVPKEN---LKNFEKL 144
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHID 442
PIYP G+ A+ +R IA AL+ + + +P EI A +H PK+
Sbjct: 145 VPIYPLTEGITATQMRSMIAFALKNVSNLKENLPIEILIRENFPDKLLAIKTLHNPKNYK 204
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
E + ARKRL F+E F++Q G L +L + RK L K
Sbjct: 205 EKETARKRLAFEELFFMQAGIL---------------MLKEKRKINSYGIKCGPSGKLVK 249
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
+L P+ LT Q A S+I D++ PM RLLQGDVG GKT +A L +++ +GYQ
Sbjct: 250 SVLNKFPFELTKDQKKAFSDIENDMEDIEPMYRLLQGDVGSGKTAIAALTAAKIVENGYQ 309
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
A M PTE+LA+QHY+ L L N+ + IA L+G+ + ++ L++G+I +
Sbjct: 310 ATIMAPTEVLASQHYKTFLNLYKNLSVE-----IAYLSGNIKNSEREVLLNKLKSGEIDI 364
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
+IGTH+LI V+F+ L L I DEQ RFGV QR ++ + G
Sbjct: 365 LIGTHALIENNVKFAHLGLVITDEQHRFGVKQR----------------ELLETKGE--- 405
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
PHVL M+ATPIPRT+AL++YGD+ + I +P GR P+KTY+I
Sbjct: 406 ----NPHVLVMTATPIPRTMALSVYGDLDASVINQMPIGRKPVKTYVI 449
>gi|300854456|ref|YP_003779440.1| ATP-dependent DNA helicase [Clostridium ljungdahlii DSM 13528]
gi|300434571|gb|ADK14338.1| ATP-dependent DNA helicase [Clostridium ljungdahlii DSM 13528]
Length = 679
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 176/546 (32%), Positives = 259/546 (47%), Gaps = 102/546 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L + I + G+ K L C + + LL +FPR Y +I
Sbjct: 3 LSEDIGSLKGVGKVTCKNLNRCCIFNILDLLLYFPRDY--------------------DI 42
Query: 267 ISS----RGMKAGCSFSFLEVIVGCEIA----DTETTSGDEVVNIDSGQKKKIYLHLKKF 318
ISS +G G +V++ C++ D T +G + I ++ +
Sbjct: 43 ISSCSDLKGNTEG------KVMIDCKVNSIERDIRTRTGKIISTI-------VFENRNGL 89
Query: 319 FRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRA 378
F+ F P++K K K+ ++GK++ R N+ N V+ + +
Sbjct: 90 FKAKWFNQ-PYVKK---KFKIDAEYRIAGKIQHYRGNSVIT----NPKVVNINSNSKIEE 141
Query: 379 KGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQP 438
K PIYP K G+ + I+ L + + + +PK I ++ L L A IH P
Sbjct: 142 K--ILPIYPLKSGITNNTFIKLISYVLTKVSID-ENLPKWIITKYKLCSLDKAIRIIHNP 198
Query: 439 KHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWS 498
+ E +KRL F E F L ++ + E G K+G+ K P L
Sbjct: 199 VNFRELREGKKRLKFQELFTYSL-KILMLKEYFGKN--KKGVAFKI-APEL--------- 245
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
+L LPY LT +Q I EI+ D K+ VPMNRLLQGDVG GKTVVA ++ V+
Sbjct: 246 ---IELKNKLPYKLTKAQNKVIREILIDEKREVPMNRLLQGDVGSGKTVVALISIFNVVK 302
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+GYQA M PTE+LA QHYE +KLL+ + +I LL GS K I++ L+ G
Sbjct: 303 NGYQAVLMAPTEILAQQHYEEAMKLLEGFD-----VEIELLCGSVTPKNKDEIKEKLKMG 357
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+I ++IGTH+LI + VEF + + + DEQ RFGV+QR + +K
Sbjct: 358 EIDIIIGTHALIEDNVEFKNIGIVVTDEQHRFGVIQRSKLVNK----------------- 400
Query: 679 SPKDDQHMAPHV--LAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKG 736
HV L M+ATPIPRTL+L LYGD++++ I +LPPGR I TY + N +
Sbjct: 401 --------GDHVDTLIMTATPIPRTLSLYLYGDLNVSTIDELPPGRQKIDTYYRDKNSR- 451
Query: 737 YENVYK 742
+ VYK
Sbjct: 452 -DKVYK 456
>gi|383456668|ref|YP_005370657.1| ATP-dependent DNA helicase [Corallococcus coralloides DSM 2259]
gi|380734094|gb|AFE10096.1| ATP-dependent DNA helicase [Corallococcus coralloides DSM 2259]
Length = 983
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 153/431 (35%), Positives = 223/431 (51%), Gaps = 63/431 (14%)
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
T F + P+LKS + VG+ + +SG+VRA S N EM ++ +D ++ + R
Sbjct: 379 TYFNAGPWLKS---RFSVGKQLVLSGEVRA--SMNGREMAHPELEPAEDLENTTSVHFHR 433
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANFD-PVPKEITQEFGLLCLFDAYMGIHQPKH 440
P+YP R+ +R + + + P+P ++ + + L+ L DA IH P
Sbjct: 434 IVPVYPGFERGEQRSFRELASRISEQHAHHLEEPLPADLRRRYHLMGLPDALRFIHFPP- 492
Query: 441 IDEADL---------ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNA 491
D+ADL A +RL FDE F+LQLG L+ G + E EG+ RL+
Sbjct: 493 -DDADLEALDAHQSPAHRRLAFDELFFLQLG---MALKRQGIKAE-EGIAFNVSPERLDK 547
Query: 492 AYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFL 551
A ALP+ LT +Q + +I D+ +P PMNRL+QGDVG GKT VA +
Sbjct: 548 ARA------------ALPFQLTGAQARVVGDIARDMTRPEPMNRLVQGDVGSGKTAVALV 595
Query: 552 ACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMI 611
A M + GYQ A M PTE+LA QH ++L+ + ++ L++ + K R +
Sbjct: 596 AGMVALQDGYQVAVMAPTEILAEQHERTFRRILEPLGY-----RVGLISAAGTAKHKREV 650
Query: 612 RKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGM 671
R+ + GDI L +GTH+L+ V F L L ++DEQ RFGV+QR +T MS G
Sbjct: 651 RESVAKGDIHLAVGTHALLEGGVSFQKLGLVVIDEQHRFGVLQR--------HTLMSKG- 701
Query: 672 AMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
+ P VL M+ATPIPRTLA+ LYGD+ ++ I LPPGR PI T +
Sbjct: 702 --------------LTPDVLVMTATPIPRTLAMTLYGDLDVSIIDQLPPGRTPITTRVFN 747
Query: 732 GNEKG--YENV 740
++ YE V
Sbjct: 748 NEQRARVYEAV 758
>gi|194337413|ref|YP_002019207.1| ATP-dependent DNA helicase RecG [Pelodictyon phaeoclathratiforme
BU-1]
gi|194309890|gb|ACF44590.1| ATP-dependent DNA helicase RecG [Pelodictyon phaeoclathratiforme
BU-1]
Length = 706
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 164/546 (30%), Positives = 258/546 (47%), Gaps = 96/546 (17%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFIGEII 267
I+ + G+ + L G TL L +FPR Y D + L DG+ +G +I
Sbjct: 6 SIAYLKGVGTKKGAILREAGMVTLDDLFDYFPRRYLDRSAMKSISSLADGETVTVVGTVI 65
Query: 268 SSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
++ + + +G + E T +FRG R+ S
Sbjct: 66 KTQLDGDSPGRARFKAWLGDQTGVLELT----------------------WFRGVRYFSR 103
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDE---------DDLSLRA 378
++ G+ + V GKV +H +M+ + D L + D L
Sbjct: 104 SVVQ--------GDSLAVHGKVSYF--GHHAQMQHPDYDRLTPDLIESRNGECSDFELYN 153
Query: 379 KGRPYPIYPS-----KGGLNASLLRDTIARALQ-ALPANFDPVPKEITQEFGLLCLFDAY 432
G+ P+YP+ + GL + LR IARA + P + + + + LL L +AY
Sbjct: 154 TGKIIPLYPTNEAMKQAGLGSKSLRTLIARAFELCTPGKEENLTSSMLADNNLLPLAEAY 213
Query: 433 MGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAA 492
+H P ++ AR R+ + E FY QL L+ + ++ + R N A
Sbjct: 214 REMHFPSSHEQLARARYRMKWTELFYAQL--LFAL---------------RHSEIRRNRA 256
Query: 493 YMEGWSS--LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAF 550
++ S +T+KL LP++LT +Q +A+ EI DL+ PMNRLLQGDVG GKT+VA
Sbjct: 257 AVKFTHSGEVTQKLYATLPFALTEAQKTAVREIYRDLRSGSPMNRLLQGDVGSGKTIVAM 316
Query: 551 LACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRM 610
A + +G QAAFM PTE+LA QHY + +L + + ++ L+TG K+ +
Sbjct: 317 FAMALAVDNGLQAAFMAPTEILAVQHYLVMKRLFNPL-----GLQVGLVTGRQRKKERQE 371
Query: 611 IRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSG 670
+ L +G++ + +GTH++I V ++ L L I+DEQ RFGV+QR F K +
Sbjct: 372 VLAALGSGELHIAVGTHAMIEPGVSYATLGLVIIDEQHRFGVLQRKAFQEKAIH------ 425
Query: 671 MAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
PHVL M+ATPIPRTL + ++GD+ ++ I +P GRIP++T +
Sbjct: 426 -----------------PHVLLMTATPIPRTLTMGVFGDLDVSVIRQMPVGRIPVRTIVR 468
Query: 731 EGNEKG 736
EKG
Sbjct: 469 SEEEKG 474
>gi|291542986|emb|CBL16096.1| ATP-dependent DNA helicase RecG [Ruminococcus bromii L2-63]
Length = 681
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 162/521 (31%), Positives = 249/521 (47%), Gaps = 86/521 (16%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
++ + G+ ++ G ++ L++ +PRTY D N + +D+ +Y GE +
Sbjct: 9 VTNLNGIGEKRAALFARLGIKSVGDLINFYPRTYEDWSNIK-HIDELEY----GETV--- 60
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFL 330
C ++ +V + DT SG +++ + + + L FF +S+
Sbjct: 61 -----C----IKAVVATSVNDTRI-SGGRIISKTAVYDETGSIQLV-FFNNKYISSML-- 107
Query: 331 KSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKG 390
+ GE+ GK+ S++ Y M+ + +R PIY
Sbjct: 108 ------RQGGEYFFY-GKI----SSDSYGMQIVSPTFAPAVKGTQIR------PIYRQTA 150
Query: 391 GLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARK 449
GL + + + +AL LP+ DP+P I + F L L A IH PK+ + + ARK
Sbjct: 151 GLPSKSVESAVRQALSMLPSKIKDPLPDAIRERFDLCSLRQALFDIHFPKNRQQLEAARK 210
Query: 450 RLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALP 509
RL+ +E L LG + R +E +K+ LP
Sbjct: 211 RLVTEELVVLNLG------------------MRNLRDHSRGVTSLEITKDYSKEFESLLP 252
Query: 510 YSLTSSQLSAISEIIWDL-KQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
+++T++Q A+S+ I D+ + P+NRL+QGDVG GKT VA C V +G+Q AFM P
Sbjct: 253 FTMTNAQKRAVSDCINDIINKSSPLNRLVQGDVGSGKTAVAASVCYTVAKNGFQTAFMAP 312
Query: 569 TELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHS 628
TE+LA QHY+ KL +N + K+ LLTG+ + + IRK L G I +VIGTH+
Sbjct: 313 TEILARQHYKTFQKLFENTD-----IKVGLLTGTLRESEKKQIRKSLADGSIDMVIGTHA 367
Query: 629 LIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAP 688
LI +K EF L LA+ DEQ RFGV QR + K P
Sbjct: 368 LITDKTEFKNLALAVTDEQHRFGVAQRAKLLGK-----------------------GNNP 404
Query: 689 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYI 729
H+L MSATPIPRTL L ++GD+ ++ I +LPP R P+KT +
Sbjct: 405 HLLVMSATPIPRTLGLIIFGDLDISIIDELPPSRKPVKTVL 445
>gi|15642978|ref|NP_228020.1| ATP-dependent DNA helicase RecG [Thermotoga maritima MSB8]
gi|16975404|pdb|1GM5|A Chain A, Structure Of Recg Bound To Three-Way Dna Junction
gi|4980702|gb|AAD35297.1|AE001705_8 ATP-dependent DNA helicase [Thermotoga maritima MSB8]
Length = 780
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 175/526 (33%), Positives = 260/526 (49%), Gaps = 81/526 (15%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L I G+ +L+ G TLR LL FPR Y D + L+D + GE
Sbjct: 113 LSTDIQYAKGVGPNRKKKLKKLGIETLRDLLEFFPRDYEDRRKI-FKLND----LLPGEK 167
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLK-KFFRGTRFT 325
++++G IV E T + +NI + +H+ K+F
Sbjct: 168 VTTQGK-----------IVSVE------TKKFQNMNILTAVLSDGLVHVPLKWFNQDYLQ 210
Query: 326 SIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPI 385
+ +LK + GK V V+G V++ YE+ +N +V E + R PI
Sbjct: 211 T--YLKQLTGKE-----VFVTGTVKSNAYTGQYEI--HNAEVTPKEGEYVRRI----LPI 257
Query: 386 YPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
Y G++ +R + +L + + +P+ I ++ LL + DAY G+H PK
Sbjct: 258 YRLTSGISQKQMRKIFEENIPSLCCSLKETLPERILEKRKLLGVKDAYYGMHFPKTFYHL 317
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
+ AR+RL ++E F LQL + + + EK G + K +EG L ++
Sbjct: 318 EKARERLAYEELFVLQLA-----FQKIRKEREKHGGIPKK---------IEG--KLAEEF 361
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
+++LP+ LT++Q A EI D+ PMNRLLQGDVG GKTVVA LA ++ +G+Q A
Sbjct: 362 IKSLPFKLTNAQKRAHQEIRNDMISEKPMNRLLQGDVGSGKTVVAQLAILDNYEAGFQTA 421
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
FMVPT +LA QHY ++ K +ALL G+T + I+ L+ G I +VI
Sbjct: 422 FMVPTSILAIQHYRRTVESF-----SKFNIHVALLIGATTPSEKEKIKSGLRNGQIDVVI 476
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+LI E V F L L I+DEQ RFGV QR M+ G MV++
Sbjct: 477 GTHALIQEDVHFKNLGLVIIDEQHRFGVKQREAL--------MNKG-KMVDT-------- 519
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
L MSATPIPR++ALA YGD+ +T I ++PPGR ++T ++
Sbjct: 520 ------LVMSATPIPRSMALAFYGDLDVTVIDEMPPGRKEVQTMLV 559
>gi|293192359|ref|ZP_06609470.1| ATP-dependent DNA helicase RecG [Actinomyces odontolyticus F0309]
gi|292820274|gb|EFF79268.1| ATP-dependent DNA helicase RecG [Actinomyces odontolyticus F0309]
Length = 715
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 164/524 (31%), Positives = 240/524 (45%), Gaps = 69/524 (13%)
Query: 217 LSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGC 276
L K+ LE G T+ LL PR Y G + ++ G
Sbjct: 15 LPKKTAKALEGAGVATVGDLLLVAPRRY----------------YHWGRLTPLSSLREGE 58
Query: 277 SFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGK 336
+ L + G + ++SG V ++ + FF ++ P IE
Sbjct: 59 DVTILAEVAGAHLVANRSSSG---VRLEVTLTDGVQFLSATFFAKNQYKLAP----IERL 111
Query: 337 HKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASL 396
G+ +GKV A R ++ + + + ED R RP PIYP+ G L +
Sbjct: 112 LTPGQSFLFAGKVGAYRGK--LQLTHPSFEGVDGED--IERIASRPIPIYPATGSLASWA 167
Query: 397 LRDTIARALQALPANF--DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFD 454
+ I L L DPVP ++ + G D +HQP+ ++ ARK L F
Sbjct: 168 IARAIGMVLDHLDDAHVPDPVPADVRERAGFASHADCLRALHQPETDEDYQQARKALAFA 227
Query: 455 EFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSS-LTKKLLRALPYSLT 513
E F LQ+G L + R R AA + L ++ +LP+ LT
Sbjct: 228 EAFVLQVG-----------------LAAQRRGARAVAALASPIDAPLCERFRSSLPFELT 270
Query: 514 SSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLA 573
SQ A+++I DL VPM RLLQGDVG GKTVVA A ++V+ +G+Q AF+ PTE+LA
Sbjct: 271 DSQREAVAQIGADLAGEVPMQRLLQGDVGSGKTVVALSALLQVVAAGHQGAFVAPTEVLA 330
Query: 574 TQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEK 633
QH L LL+ + D P + LLTGST R I+ + + +V GTH+L E
Sbjct: 331 EQHAASLRALLEPLGAD--APDVRLLTGSTTPAARREIQSAMNAAEPLIVAGTHALFQES 388
Query: 634 VEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAM 693
V F+ L L +VDEQ RFGV QR G+ +D + A H L M
Sbjct: 389 VRFADLALVVVDEQHRFGVEQRAALR------------------GAREDGR--AVHELVM 428
Query: 694 SATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGY 737
+ATPIPRT+A+ ++GD+ T+++ +P GR P+ TY+ + +
Sbjct: 429 TATPIPRTIAMTVFGDLDDTRMSGMPSGRTPVATYLADSANAAW 472
>gi|399890209|ref|ZP_10776086.1| RecG helicase [Clostridium arbusti SL206]
Length = 678
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 173/537 (32%), Positives = 256/537 (47%), Gaps = 93/537 (17%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFIGEIIS 268
IS + G+ +L L C +++ LL +FPR Y ++ + D D G + I
Sbjct: 7 ISSIKGVGPKLKIVLNKCNIFSVLDLLLYFPRDYENVSYTKNINDFDKGSKVM-----IK 61
Query: 269 SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIP 328
R +K SF + +G V K I+ F+G F ++P
Sbjct: 62 CRFLKNEGSF--------------RSKNGKIV-------SKLIFTDGLNIFKGVWF-NMP 99
Query: 329 FLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDV---LKDEDDLSLRAKGRPYPI 385
+ I + + GK+ ++ E +DV +K+E+ S G+ PI
Sbjct: 100 Y---IYKTFILDNDYILLGKINKVKG-------EITLDVPQVVKNENIES----GKLIPI 145
Query: 386 YPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
Y + L ++ + + L + + +P + ++ L A IH PK++ E +
Sbjct: 146 YALRENLKSTYIIKIVNFVLSQINIE-ENLPLWVLEKHKFYSLDKAIRCIHNPKNLIELN 204
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLL 505
AR+RL F E F L L L D K + A+ S+ +L
Sbjct: 205 EARRRLKFQELFTYSLKVLM--------------LRDYINKGKKGIAF--KISTELTELK 248
Query: 506 RALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAF 565
+PYSLT++Q + EI+ D K+P+ MNRL+QGDVGCGKT++A +A VI +GYQA
Sbjct: 249 NNIPYSLTNAQSKVMREILIDEKKPIAMNRLVQGDVGCGKTIIALIAMFNVIKNGYQAVL 308
Query: 566 MVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIG 625
+ PTE+L+ QHY KLL K I LLTGS K +I+ DL+ G I LVIG
Sbjct: 309 LAPTEILSKQHYTEAEKLL-----SKFDINIGLLTGSISDKNKTIIKNDLKEGKINLVIG 363
Query: 626 THSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQH 685
TH+L+ + VEF L + + DEQ RFGV+QR + +K G+ D
Sbjct: 364 THALLEDNVEFKNLGMVVTDEQHRFGVMQRSKIFNK----------------GNNID--- 404
Query: 686 MAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYK 742
VL M+ATPIPRTL L LYGD+ ++ I +LPPGR + TY + +K E VYK
Sbjct: 405 ----VLVMTATPIPRTLGLYLYGDLEVSSIDELPPGRQKVDTYYTD--KKDSEKVYK 455
>gi|312143899|ref|YP_003995345.1| ATP-dependent DNA helicase RecG [Halanaerobium hydrogeniformans]
gi|311904550|gb|ADQ14991.1| ATP-dependent DNA helicase RecG [Halanaerobium hydrogeniformans]
Length = 685
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 166/539 (30%), Positives = 256/539 (47%), Gaps = 91/539 (16%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYAD------LQNAQIDLDDGQY 259
LLD+ + + G+ + +L T+ LL++FPR Y D ++ AQI G+
Sbjct: 5 LLDE-VQYIKGVGPKWAKKLAKLNIETVYDLLYYFPREYKDRSQISSIRYAQI----GEE 59
Query: 260 FIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFF 319
E+I K +F L+V DT+ +G + + G + I+
Sbjct: 60 VTIKAEVIKVEYKKIRKNFDLLKVTFS---DDTDVLNG---IWYNQGYLRDIF------- 106
Query: 320 RGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVL-KDEDDLSLRA 378
+ G+F +SGK+ ++ Y+ +E + V K D+ S+
Sbjct: 107 ------------------EEGKFYLLSGKINE-KTWKKYKRKEIDNPVFEKIGDNSSVLN 147
Query: 379 KGRPYPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQ 437
GR PIY GL LR +A AL+ + D +P + +++ L L + +G+H
Sbjct: 148 TGRIVPIYSLTEGLTQRRLRRVMANALKKYSSYLDDKLPDFLLKKYNLPGLKTSILGMHF 207
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYM-EG 496
PK +++RKRL F+EFFY QL LDK +K + E
Sbjct: 208 PKSDKHQEVSRKRLAFEEFFYFQL-----------------YALDKKQKNNIEEGIQHEA 250
Query: 497 WSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEV 556
+ + L L + LT++Q EI D++ M+RLLQGDVG GKT++A L+ +E
Sbjct: 251 VPEIEARFLSELDFELTTAQKRVWKEISKDMESKEAMSRLLQGDVGSGKTIIAALSFLES 310
Query: 557 IGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQ 616
+ + YQ FM PTE+LA QHY + L+L +N + + I LLTGS + R I + +
Sbjct: 311 LANDYQGVFMAPTEILAEQHYLNFLELFNNFDYE-----ITLLTGSLKNPERREIEEKIS 365
Query: 617 TGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNS 676
GDI L+IGTH+L E +E+ L L ++DEQ RFGV QR K
Sbjct: 366 AGDIDLIIGTHALFQEGIEYQKLGLVVIDEQHRFGVEQRHSLKEK--------------G 411
Query: 677 DGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
D P +L M+ATPIPR++A+ +YGD+ L+ I ++PPGR T+ N +
Sbjct: 412 DN---------PDLLIMTATPIPRSMAMLVYGDLDLSVIDEMPPGRKRTATFWRRENRR 461
>gi|95929154|ref|ZP_01311898.1| ATP-dependent DNA helicase RecG [Desulfuromonas acetoxidans DSM
684]
gi|95134652|gb|EAT16307.1| ATP-dependent DNA helicase RecG [Desulfuromonas acetoxidans DSM
684]
Length = 704
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 174/544 (31%), Positives = 259/544 (47%), Gaps = 98/544 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFIG 264
L+ +S + G+ +L +L G +T+ LL+ P Y D ++ L G+ F G
Sbjct: 11 LNTPLSSLRGVGPKLCEKLTRLGLHTVEDLLYTLPHRYEDRRHFSTINQLKPGEPGQFRG 70
Query: 265 EIISSRGMKAGCSFS-FLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTR 323
+I+++ + G EV+VG D+GQ + H ++ +
Sbjct: 71 KILNADEVPIGRGRQKLFEVVVGD----------------DTGQMLLKWFHYRRDWMKKN 114
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY 383
+T G V V G+VR + E+ ID D SLR
Sbjct: 115 YTP-------------GRIVQVYGEVRFY--SGRREILHPEIDFNDATDSASLRI----L 155
Query: 384 PIYPSKGGLNASLLRD----TIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPK 439
P+YP GL+ LR+ +A ++P + +P+ + ++ LL L A + H P
Sbjct: 156 PVYPLTEGLSQKQLRNFCQQAVADYADSVPTH---LPEWVMKKRDLLPLNQALLHCHCPP 212
Query: 440 HIDE--------ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNA 491
+D D AR+ L++DEFFYLQLG L G Q E+ R L
Sbjct: 213 -VDSDFLCLQQGQDPARRTLVYDEFFYLQLGL---TLRRQGVQVEQG------RAFTLEH 262
Query: 492 AYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFL 551
Y T+ L +ALP+SLT++Q + EI D+ P PMNRL+QGDVG GKT+VA +
Sbjct: 263 RY-------TQPLAKALPFSLTAAQKRVLGEIKQDMLAPHPMNRLIQGDVGSGKTIVALM 315
Query: 552 ACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMI 611
A + + +G QAA + PTE+LA QHY + + ALLTGSTP + + +
Sbjct: 316 AALIAVENGAQAAVLAPTEILAEQHYNQFHHWMTQL-----GLHCALLTGSTPKSERQTL 370
Query: 612 RKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGM 671
L G+I L++GTH+++ V F+ L L I+DEQ RFGV QR + K +
Sbjct: 371 LDGLAHGEIKLLVGTHAILQPDVTFADLGLVIIDEQHRFGVQQRHQLRKKGH-------- 422
Query: 672 AMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P L M+ATPIPRTL+L LYGD++++ I +LPPGR PI T I
Sbjct: 423 ---------------NPDTLVMTATPIPRTLSLTLYGDLAMSVIDELPPGRTPITTRIAR 467
Query: 732 GNEK 735
+++
Sbjct: 468 SSQR 471
>gi|121533683|ref|ZP_01665510.1| ATP-dependent DNA helicase RecG [Thermosinus carboxydivorans Nor1]
gi|121307674|gb|EAX48589.1| ATP-dependent DNA helicase RecG [Thermosinus carboxydivorans Nor1]
Length = 684
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 134/357 (37%), Positives = 190/357 (53%), Gaps = 43/357 (12%)
Query: 380 GRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPK 439
GR P+YP+ +N +LR + +AL + +P I + L+ A IH P
Sbjct: 145 GRIVPVYPATENINQRVLRQLVRQALTDCHPIPEILPGNIICRYNLIGRDQALESIHFPP 204
Query: 440 HIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSS 499
D AR+RL+F+E F+LQ G LY L K
Sbjct: 205 DKDALTQARRRLVFEELFFLQYGLLY---------------LKNRNKHEFQGIKHAQDGK 249
Query: 500 LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
L+K++L LP++LT+ Q A+ EI D++ PM RLLQGDVG GKTV+A LA ++ + +
Sbjct: 250 LSKEVLARLPFTLTTDQQVALQEIKADMEDTRPMQRLLQGDVGSGKTVIAALALVKTVEN 309
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
GYQ A M PTE+LA QH+ L +LL N+ ++ALLTG ++ + +L+ G
Sbjct: 310 GYQGAMMAPTEILAEQHFHTLSRLLANL-----GIRLALLTGRLTKRERDQVLANLRNGL 364
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
+ +VIGTH+L+ + V F L L + DEQ RFGV QR A++ + G
Sbjct: 365 VDIVIGTHALLQDDVHFKHLGLVVTDEQHRFGVRQR----------------ALLQAKGK 408
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKG 736
P VL M+ATPIPRT+AL +YGD+ ++ I LPPGR PIKTY + G +G
Sbjct: 409 -------MPDVLVMTATPIPRTMALTVYGDLDVSVIRTLPPGRKPIKTYSVTGEMRG 458
>gi|222099455|ref|YP_002534023.1| ATP-dependent DNA helicase RecG [Thermotoga neapolitana DSM 4359]
gi|221571845|gb|ACM22657.1| ATP-dependent DNA helicase [Thermotoga neapolitana DSM 4359]
Length = 750
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 167/506 (33%), Positives = 256/506 (50%), Gaps = 85/506 (16%)
Query: 229 GFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCS---FSFLEVIV 285
G TL+ LL FPR Y D + + L++ + G ++++G + F + ++V
Sbjct: 105 GIETLKDLLEFFPRDYEDRRKV-LKLNE----LIPGRKVTTQGKISSVEKKKFQNMNILV 159
Query: 286 GCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCV 345
+ G +++ LK F + T + K VG+ V V
Sbjct: 160 AV---------------LSDGL---MHVLLKWFNQDFLLTQL--------KQLVGKEVFV 193
Query: 346 SGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARAL 405
+G V+ YE+ +N +VL E ++ R +PIY G++ +R +
Sbjct: 194 TGTVKLNPYTGQYEI--HNAEVLPKEREIIRRI----FPIYRLTSGISQKQMRRIFEENI 247
Query: 406 QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRL 464
+L + + +P+ I ++ LL + DAY G+H PK + + AR+RL ++E F LQL
Sbjct: 248 PSLCCSLEETLPERIIKKRNLLSIKDAYYGMHFPKTLHHLEKARERLAYEELFTLQLA-- 305
Query: 465 YQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEII 524
+ + + EK G + K +EG L ++ +++LP+ LT +Q A EI
Sbjct: 306 ---FQKVRREREKHGGIPKK---------IEG--RLAEEFIKSLPFQLTGAQKRAHEEIR 351
Query: 525 WDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLL 584
D+ PMNRLLQGDVG GKTVVA LA ++ +G+QAAFMVPT +LA QHY ++
Sbjct: 352 KDMISEKPMNRLLQGDVGSGKTVVAQLAILDNYEAGFQAAFMVPTSILAIQHYRRTMESF 411
Query: 585 DNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIV 644
+ ++ALL G+T + I+ L+ G I LVIGTH+LI E V F L L I+
Sbjct: 412 SRFD-----IRVALLIGATSPSEKEKIKSGLKNGQIDLVIGTHALIQEDVHFKNLGLVII 466
Query: 645 DEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLAL 704
DEQ RFGV QR M+ G MV++ L MSATPIPR++AL
Sbjct: 467 DEQHRFGVRQREAL--------MNKG-RMVDT--------------LVMSATPIPRSMAL 503
Query: 705 ALYGDMSLTQITDLPPGRIPIKTYII 730
A YGD+ +T I ++PPGR ++T ++
Sbjct: 504 AFYGDLDVTVIDEMPPGRKEVQTILV 529
>gi|418046141|ref|ZP_12684235.1| ATP-dependent DNA helicase RecG [Thermotoga maritima MSB8]
gi|351675694|gb|EHA58854.1| ATP-dependent DNA helicase RecG [Thermotoga maritima MSB8]
Length = 768
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 175/526 (33%), Positives = 260/526 (49%), Gaps = 81/526 (15%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L I G+ +L+ G TLR LL FPR Y D + L+D + GE
Sbjct: 101 LSTDIQYAKGVGPNRKKKLKKLGIETLRDLLEFFPRDYEDRRKI-FKLND----LLPGEK 155
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLK-KFFRGTRFT 325
++++G IV E T + +NI + +H+ K+F
Sbjct: 156 VTTQGK-----------IVSVE------TKKFQNMNILTAVLSDGLVHVPLKWFNQDYLQ 198
Query: 326 SIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPI 385
+ +LK + GK V V+G V++ YE+ +N +V E + R PI
Sbjct: 199 T--YLKQLTGKE-----VFVTGTVKSNAYTGQYEI--HNAEVTPKEGEYVRRI----LPI 245
Query: 386 YPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
Y G++ +R + +L + + +P+ I ++ LL + DAY G+H PK
Sbjct: 246 YRLTSGISQKQMRKIFEENIPSLCCSLKETLPERILEKRKLLGVKDAYYGMHFPKTFYHL 305
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
+ AR+RL ++E F LQL + + + EK G + K +EG L ++
Sbjct: 306 EKARERLAYEELFVLQLA-----FQKIRKEREKHGGIPKK---------IEG--KLAEEF 349
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
+++LP+ LT++Q A EI D+ PMNRLLQGDVG GKTVVA LA ++ +G+Q A
Sbjct: 350 IKSLPFKLTNAQKRAHQEIRNDMISEKPMNRLLQGDVGSGKTVVAQLAILDNYEAGFQTA 409
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
FMVPT +LA QHY ++ K +ALL G+T + I+ L+ G I +VI
Sbjct: 410 FMVPTSILAIQHYRRTVESF-----SKFNIHVALLIGATTPSEKEKIKSGLRNGQIDVVI 464
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+LI E V F L L I+DEQ RFGV QR M+ G MV++
Sbjct: 465 GTHALIQEDVHFKNLGLVIIDEQHRFGVKQREAL--------MNKG-KMVDT-------- 507
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
L MSATPIPR++ALA YGD+ +T I ++PPGR ++T ++
Sbjct: 508 ------LVMSATPIPRSMALAFYGDLDVTVIDEMPPGRKEVQTMLV 547
>gi|333995741|ref|YP_004528354.1| ATP-dependent DNA helicase RecG [Treponema azotonutricium ZAS-9]
gi|333736696|gb|AEF82645.1| ATP-dependent DNA helicase RecG [Treponema azotonutricium ZAS-9]
Length = 720
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 140/361 (38%), Positives = 197/361 (54%), Gaps = 37/361 (10%)
Query: 380 GRPYPIYPSKGGLNASLLRDTIARALQALPANFD-PVPKEITQEFGLLCLFDAYMGIHQP 438
G+ PIYP GL+ ++LR + RAL +N + +P+EI + L A IH P
Sbjct: 142 GKILPIYPLTEGLSQNILRRFMRRALDIYTSNLENELPEEIIKRDDLYSKPQALQAIHFP 201
Query: 439 KHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWS 498
+ D A K ++++E FYL+ M+ G + R + G+S
Sbjct: 202 SSYEARDRAEKTIVYEELFYLE------MIVGKRAMERRAAPASGKRAITTGS----GFS 251
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI- 557
L K+L+ LP+SLT Q+ EI D+ P PM RLLQGDVG GKT+V+FLAC+ +
Sbjct: 252 PLQKRLIERLPFSLTPGQIETAGEINRDMDGPYPMARLLQGDVGSGKTLVSFLACLRAVE 311
Query: 558 ---GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKD 614
G QAA M PTELLA QH E+ KLL+ + +IA LTG+ + K
Sbjct: 312 EAEGQRGQAALMAPTELLARQHAENAAKLLEPL-----GLRIAFLTGNIKAAGRAQLLKA 366
Query: 615 LQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMV 674
L G+I +V GTH+L + +S LRL ++DEQ RFGV QR M+ G + +
Sbjct: 367 LAAGEIDIVAGTHALFSRDTIYSNLRLVVIDEQHRFGVTQR--------QAVMAKGQSSL 418
Query: 675 NSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII-EGN 733
+ G+P +L MSATPIPRTLAL ++GD+ ++ I D+PPGR PIKT+++ E N
Sbjct: 419 KAQGTPD--------LLMMSATPIPRTLALTVFGDLDVSVIRDMPPGRKPIKTHLVKESN 470
Query: 734 E 734
E
Sbjct: 471 E 471
>gi|304316960|ref|YP_003852105.1| ATP-dependent DNA helicase RecG [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778462|gb|ADL69021.1| ATP-dependent DNA helicase RecG [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 682
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 172/528 (32%), Positives = 261/528 (49%), Gaps = 87/528 (16%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L K I V G+ + L+ G T++ L ++P+ Y + + I +D + IGE
Sbjct: 3 LSKSIQYVKGVGPKRALLLKKIGIETVKDALEYYPKEYENREKI-IPID----MLKIGEK 57
Query: 267 ISSRGMKAGCSFSF-LEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFT 325
+ + AG + + ++ + +I + + E+V +
Sbjct: 58 QTFKAYIAGKAREYKVKRLTITKIPVKDGSGAVELV----------------------WY 95
Query: 326 SIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNID--VLKDEDDLSLRAKGRPY 383
+ P++K G K+GE ++GKV Y+ + ++ V+ D L++ A GR
Sbjct: 96 NQPYIK---GNFKLGEEYIINGKV-------FYKYGQIYVENPVMDRSDSLNINA-GRIV 144
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKE-ITQEFGLLCLFDAYMGIHQPKHID 442
PIY GL+ ++R I L+ + + + E +E+ LL + A IH P+
Sbjct: 145 PIYKLTEGLSQKVIRSIIFNLLKEYLNDIEEIFDENFLKEYNLLDIKSAIKNIHFPESSK 204
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
+ ++ RL+F EFF LQLG L + ++ + K+R+ L K
Sbjct: 205 MLERSKYRLVFQEFFILQLG-----LTLIKNRYNTDKAGIKFRRVDL------------K 247
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
L + LT +Q A++EI+ D+ MNRLLQGDVG GKTV+A A + +GYQ
Sbjct: 248 DFFSKLKFHLTQAQERALNEILDDMYSGKVMNRLLQGDVGSGKTVIAAAAMYVAVKNGYQ 307
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
A+ M PTE+LA QHY L +L D ++ KI LLTGS K+ +I ++++ G+I +
Sbjct: 308 ASIMAPTEILAKQHYFTLKELYDELD-----IKIELLTGSIGTKKKNIIIEEIKNGEIDI 362
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
++GTHSLI E V+F L LAI DEQ RFGV QR F K G D
Sbjct: 363 LVGTHSLIEENVQFKNLGLAITDEQHRFGVRQRAVFKEK----------------GEQTD 406
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
VL M+ATPIPRTLAL LYGD+ ++ I +LPPGR I+TY I
Sbjct: 407 -------VLVMTATPIPRTLALMLYGDLDISVIDELPPGRKKIETYAI 447
>gi|170288540|ref|YP_001738778.1| ATP-dependent DNA helicase RecG [Thermotoga sp. RQ2]
gi|170176043|gb|ACB09095.1| ATP-dependent DNA helicase RecG [Thermotoga sp. RQ2]
Length = 763
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 175/526 (33%), Positives = 260/526 (49%), Gaps = 81/526 (15%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L I G+ +L+ G TLR LL FPR Y D + L+D + GE
Sbjct: 96 LSTDIQYAKGVGPNRKKKLKKLGIETLRDLLEFFPRDYEDRRKI-FKLND----LLPGEK 150
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLK-KFFRGTRFT 325
++++G IV E T + +NI + +H+ K+F
Sbjct: 151 VTTQGK-----------IVSVE------TKRFQNMNILTAVLSDGLVHVPLKWFNQEYLQ 193
Query: 326 SIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPI 385
+ +LK + GK V V+G V++ YE+ +N +V E + R PI
Sbjct: 194 T--YLKQLTGKE-----VFVTGTVKSNAYTGQYEI--HNAEVTPKEGEYVRRI----LPI 240
Query: 386 YPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
Y G++ +R + +L + + +P+ I ++ LL + DAY G+H PK
Sbjct: 241 YRLTSGISQKQMRKIFEENIPSLCCSLKETLPERILEKRKLLGVKDAYYGMHFPKTFYHL 300
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
+ AR+RL ++E F LQL + + + EK G + K +EG L ++
Sbjct: 301 EKARERLAYEELFVLQLA-----FQKIRKEREKHGGIPKK---------IEG--KLAEEF 344
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
+++LP+ LT++Q A EI D+ PMNRLLQGDVG GKTVVA LA ++ +G+Q A
Sbjct: 345 IKSLPFKLTNAQKRAHQEIRNDMISEKPMNRLLQGDVGSGKTVVAQLAILDNYEAGFQTA 404
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
FMVPT +LA QHY ++ K +ALL G+T + I+ L+ G I +VI
Sbjct: 405 FMVPTSILAIQHYRRTVESF-----SKFNIHVALLIGATTPSEKEKIKSGLRNGQIDVVI 459
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+LI E V F L L I+DEQ RFGV QR M+ G MV++
Sbjct: 460 GTHALIQEDVHFKNLGLVIIDEQHRFGVKQREAL--------MNKG-KMVDT-------- 502
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
L MSATPIPR++ALA YGD+ +T I ++PPGR ++T ++
Sbjct: 503 ------LVMSATPIPRSMALAFYGDLDVTVIDEMPPGRKEVQTMLV 542
>gi|354807024|ref|ZP_09040501.1| ATP-dependent DNA helicase RecG [Lactobacillus curvatus CRL 705]
gi|354514529|gb|EHE86499.1| ATP-dependent DNA helicase RecG [Lactobacillus curvatus CRL 705]
Length = 680
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 166/541 (30%), Positives = 255/541 (47%), Gaps = 107/541 (19%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L ++ + G+ + L+ G T+ LL++FP Y DL+ + Q E
Sbjct: 4 LTDSVAVLAGVGPKRLTALDQLGIRTISDLLYYFPFRYEDLKVKDLSEAADQ------EK 57
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHL--KKFFRGTRF 324
++ +G T D V++ K ++ + L + F
Sbjct: 58 VTLKG----------------------TVVADPVISRWGPGKTRLNVRLLIEHDVVMVTF 95
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ P+LK K + G V + GK ++ + + + +K L + P
Sbjct: 96 FNQPYLKD---KFEAGVDVAIYGK---------WDAKRHTLTGMK-----VLAVQSAENP 138
Query: 385 IYPSKGGLNASLLRDTIARALQA---LPANFDP--VPKEITQEFGLLCLFDAYMGIHQPK 439
+ + +N S+ + T+ + +Q L + P +P++I + L+ D G+H PK
Sbjct: 139 SFAAIYSVNKSVRQGTLVKMIQEAFDLYQDVIPELIPEDIRTRYKLMNERDLIAGMHFPK 198
Query: 440 HIDEADLARKRLIFDEFFY--LQLGRLYQ----MLEGLGTQFEKEGLLDKYRKPRLNAAY 493
EA AR+ IF EFF +QL + Q + GL Q++ E L
Sbjct: 199 TYPEAKQARRSAIFHEFFLYQIQLQAIKQTDRHVANGLALQYQNEAL------------- 245
Query: 494 MEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLAC 553
K ++ LP+ LT +Q ++EI DLK P MNRLLQGDVG GKT+VA +A
Sbjct: 246 --------KDFIQTLPFDLTDAQKRVVNEICLDLKSPAHMNRLLQGDVGSGKTIVAAIAL 297
Query: 554 MEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRK 613
+ +GYQAA MVPTE+LA QHY+ L +LL M + LLTGST K+ R +
Sbjct: 298 FAAVTAGYQAALMVPTEILAEQHYQSLQRLLAPM-----NVTVGLLTGSTTAKERRTLLA 352
Query: 614 DLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAM 673
D+++G I ++IGTH+LI + V + L A++DEQ RFGV QR K
Sbjct: 353 DIESGRINIIIGTHALIQDAVVYHKLGFAVIDEQHRFGVNQRRILREK------------ 400
Query: 674 VNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN 733
+ P +LAM+ATPIPRTLA+ YG+M ++ I +LP GRIPI+T + N
Sbjct: 401 -----------GLQPDILAMTATPIPRTLAITAYGEMDVSTIDELPKGRIPIETSWVRSN 449
Query: 734 E 734
+
Sbjct: 450 Q 450
>gi|331091213|ref|ZP_08340054.1| ATP-dependent DNA helicase RecG [Lachnospiraceae bacterium
2_1_46FAA]
gi|330404660|gb|EGG84199.1| ATP-dependent DNA helicase RecG [Lachnospiraceae bacterium
2_1_46FAA]
Length = 686
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 169/525 (32%), Positives = 252/525 (48%), Gaps = 84/525 (16%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
IS + G+ ++ G +T+ L+ +FPRTY D+ ++ I E+ R
Sbjct: 7 ISELKGVGEKTEKLFYKLGIFTVGDLIRYFPRTY-DVYEKPVE---------ISEVEEGR 56
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFL 330
+ + + + G T + ++ SG K I+ FR +PFL
Sbjct: 57 TVTVTGTIWGVVQVTGTRAMQITTLTLKDI----SGTLKVIW------FR------MPFL 100
Query: 331 KSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLK-DEDDLSLRAKGRPYPIYPSK 389
K+ + G + + GKV + E E K E + +L+ P+YP
Sbjct: 101 KNT---LRSGSVITLRGKVTKRKRVLTMEQPEIFYPSSKYQEKENTLQ------PVYPLT 151
Query: 390 GGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARK 449
G+ ++ +AL+ L + +P EI + L A GIH PK+ +E AR+
Sbjct: 152 AGITNHMIAKMEQQALENLDLKKEILPAEIRLRYHLAEYNYAVRGIHFPKNKEEYYYARE 211
Query: 450 RLIFDEF--FYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRA 507
RL+F+EF F L L +L K +K R+ + ++ L
Sbjct: 212 RLVFEEFLLFILSLRQL------------------KEKKERMQNTFSFVMPKEIEEFLDQ 253
Query: 508 LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMV 567
LPY LT++Q EI D+ M RL+QGDVG GKT++A L M V +GYQ A M
Sbjct: 254 LPYELTNAQKKVWEEIKRDITGEKVMTRLVQGDVGSGKTIIALLGLMLVGLNGYQGAMMA 313
Query: 568 PTELLATQHYEHLLKLLDNMEEDKHKP-KIALLTGSTPVKQSRMIRKDLQTGDITLVIGT 626
PTE+LA QHY + ++LD H P K+ LLTGS K+ R+ + + TG+ L++GT
Sbjct: 314 PTEVLAKQHYHSIREMLDKY----HIPLKVELLTGSMAAKEKRIAYEKIGTGEADLIVGT 369
Query: 627 HSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHM 686
H+LI EKVE+ L L I DEQ RFGV QR + + K G+
Sbjct: 370 HALIQEKVEYKNLALVITDEQHRFGVKQREKLSEK----------------GN------- 406
Query: 687 APHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
PH+L MSATPIPRTLA+ LYGD+ ++ I +LP R+PIK +++
Sbjct: 407 TPHILVMSATPIPRTLAIILYGDLDISVIDELPANRLPIKNCVVD 451
>gi|403252990|ref|ZP_10919295.1| ATP-dependent DNA helicase RecG [Thermotoga sp. EMP]
gi|402811752|gb|EJX26236.1| ATP-dependent DNA helicase RecG [Thermotoga sp. EMP]
Length = 763
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 175/526 (33%), Positives = 260/526 (49%), Gaps = 81/526 (15%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L I G+ +L+ G TLR LL FPR Y D + L+D + GE
Sbjct: 96 LSTDIQYAKGVGPNRKKKLKKLGIETLRDLLEFFPRDYEDRRKI-FKLND----LLPGEK 150
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLK-KFFRGTRFT 325
++++G IV E T + +NI + +H+ K+F
Sbjct: 151 VTTQGK-----------IVSVE------TKKFQNMNILTAVLSDGLVHVPLKWFNQDYLQ 193
Query: 326 SIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPI 385
+ +LK + GK V V+G V++ YE+ +N +V E + R PI
Sbjct: 194 T--YLKQLTGKE-----VFVTGTVKSNAYTGQYEI--HNAEVTPKEGEYVRRI----LPI 240
Query: 386 YPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
Y G++ +R + +L + + +P+ I ++ LL + DAY G+H PK
Sbjct: 241 YRLTSGISQKQMRKIFEENIPSLCCSLKETLPERILEKRKLLGVKDAYYGMHFPKTFYHL 300
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
+ AR+RL ++E F LQL + + + EK G + K +EG L ++
Sbjct: 301 EKARERLAYEELFVLQLA-----FQKIRKEREKHGGIPKK---------IEG--KLAEEF 344
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
+++LP+ LT++Q A EI D+ PMNRLLQGDVG GKTVVA LA ++ +G+Q A
Sbjct: 345 IKSLPFKLTNAQKRAHQEIRNDMISEKPMNRLLQGDVGSGKTVVAQLAILDNYEAGFQTA 404
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
FMVPT +LA QHY ++ K +ALL G+T + I+ L+ G I +VI
Sbjct: 405 FMVPTSILAIQHYRRTVESF-----SKFNIHVALLIGATTPSEKEKIKSGLRNGQIDVVI 459
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+LI E V F L L I+DEQ RFGV QR M+ G MV++
Sbjct: 460 GTHALIQEDVHFKNLGLVIIDEQHRFGVKQREAL--------MNKG-KMVDT-------- 502
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
L MSATPIPR++ALA YGD+ +T I ++PPGR ++T ++
Sbjct: 503 ------LVMSATPIPRSMALAFYGDLDVTVIDEMPPGRKEVQTMLV 542
>gi|308807965|ref|XP_003081293.1| DNA helicase RecG (ISS) [Ostreococcus tauri]
gi|116059755|emb|CAL55462.1| DNA helicase RecG (ISS) [Ostreococcus tauri]
Length = 1259
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 180/557 (32%), Positives = 273/557 (49%), Gaps = 80/557 (14%)
Query: 200 EASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQY 259
E I+ L DK VP K L+ G T+ +L + PR Y + L G
Sbjct: 519 ETPIDVLKDK----VP---KSTMKALKAEGVSTIEAVLRNCPRKYQEFSAWNKSLAMGTQ 571
Query: 260 FIFIGEIIS--SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQ--KKKIYLHL 315
G + S R G S ++V ++ ++E T+ D+ D+ K K++ H+
Sbjct: 572 VTLTGTVRSMQVRDYMRGRSIPNT-ILVEVDLPESEITTSDDNPWGDNKPRCKVKVWDHI 630
Query: 316 KKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLS 375
K R +P +G V V G + N + + + + ++ +
Sbjct: 631 SKDMRA----GMP----------IGARVSVRGTLGTGDRNCQFSIDGGRVAPIAEDAPIL 676
Query: 376 LRAKGRPYPIYPSKGGLNASLLRDTIARAL----QALPANFDPVP------KEITQEFGL 425
Y +G ++ I+ ++ + LPA DPV + E GL
Sbjct: 677 ESDGAEIVATYAKRGQMSNVEWHRAISASMDIFVEKLPA--DPVEVSMGRDNPLLSELGL 734
Query: 426 LCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLY--QMLEGLGTQFEKEGLLDK 483
L +A IH+PK+++ AR+RL F+E LQ+ L L+ L EG+
Sbjct: 735 LSHSEAVKNIHRPKNVEIVAQARERLAFEELLLLQVALLQERSRLQALPVSETTEGVC-- 792
Query: 484 YRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGC 543
+ G ++L +L LP++LT SQ S++ EI+ D+ P PM RLLQGDVGC
Sbjct: 793 ----------IVG-TALVDELRTELPFALTRSQESSLEEILSDMAGPAPMLRLLQGDVGC 841
Query: 544 GKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGST 603
GKTVVA ++ + +G+G+Q AFM PTE+LATQH+ L +LL M + PK+ LLTGST
Sbjct: 842 GKTVVAAMSLLAAVGAGHQGAFMAPTEVLATQHHRVLTELLSQM---RDPPKVVLLTGST 898
Query: 604 PVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLY 663
+ I +DL +G I +++GTH+LI EKV F++L +A+VDEQ RFGV QR SK
Sbjct: 899 KTAERAQILEDLSSGKIGIIVGTHALIHEKVVFNSLGIAVVDEQHRFGVEQRAALLSK-- 956
Query: 664 YTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRI 723
+ PH+L MSATPIPRTLA+ +G+M+L+ I + P GR+
Sbjct: 957 --------------------GKVPPHMLTMSATPIPRTLAMTKFGEMALSVIDEKPAGRL 996
Query: 724 PIKTYI--IEGNEKGYE 738
PI T + ++ ++ YE
Sbjct: 997 PIITKVCAVDEHDIAYE 1013
>gi|406927517|gb|EKD63536.1| hypothetical protein ACD_51C00259G0009 [uncultured bacterium]
Length = 660
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 173/534 (32%), Positives = 249/534 (46%), Gaps = 89/534 (16%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYAD----LQNAQIDLDDGQYFI 261
+LD +S +K+ L + T+R LL ++PR Y D ++ A + LD
Sbjct: 1 MLDMKLSKALKTTKKHLSLLASLNINTVRDLLEYYPRAYTDERESVRIADMKLDVNNVVC 60
Query: 262 FIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRG 321
SR + G S + +++ DSG I+ + ++F G
Sbjct: 61 GRLTAFHSRKSRNGMYVS------------------EGIISDDSGSVPVIWFN-QRFLAG 101
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
+ S + K+ G V S KV + +N + GR
Sbjct: 102 MLRVGKKYYFSGKLKYDKGRSVFASPKVEEVSAN--------------------MLHTGR 141
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
P+Y GL + LRD I ++ D +P+ I QE L L A IH P+
Sbjct: 142 IVPVYHETEGLTSKWLRDKIFSLIKFANEIPDELPEWIKQELKLFDLGFAVKNIHFPESP 201
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
D A++RL FDE FYLQ+ L + +R+ +A ++ +
Sbjct: 202 DALKSAQRRLAFDELFYLQVSALKRRAS--------------WRQAS-SAFQVKLDNDAM 246
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
K+ L + LT +Q ++ E++ D+ + VPM RL+QGDVG GKTVVA LA + V+ SG
Sbjct: 247 KRFAGELGFVLTQAQKRSLVEVLNDMSRGVPMLRLVQGDVGSGKTVVAALAALNVVSSGA 306
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q AFMVPTE+LA QHY L L D + + +L G K I ++ GDI
Sbjct: 307 QVAFMVPTEVLAKQHYSKLKPLFDRL-----GIRSEILIGGVGGKSK--IHDRIKVGDID 359
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
LVIGTH+LI +KV F L LAIVDEQ RFGV QR + S
Sbjct: 360 LVIGTHALIQDKVSFKKLGLAIVDEQHRFGVDQRRQLAS--------------------- 398
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
H PH+L+M+ATPIPRTLA+ +YGD+ ++ I +LPPGR I T II +++
Sbjct: 399 ---HGTPHLLSMTATPIPRTLAMIVYGDLDISLIDELPPGRKKIVTRIITDDKR 449
>gi|257887985|ref|ZP_05667638.1| ATP-dependent DNA helicase RecG [Enterococcus faecium 1,141,733]
gi|431036450|ref|ZP_19492220.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1590]
gi|431763173|ref|ZP_19551726.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E3548]
gi|257824039|gb|EEV50971.1| ATP-dependent DNA helicase RecG [Enterococcus faecium 1,141,733]
gi|430562990|gb|ELB02221.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1590]
gi|430622867|gb|ELB59577.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E3548]
Length = 678
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 174/527 (33%), Positives = 254/527 (48%), Gaps = 95/527 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
LD I+ + G+ ++ L + G T+ LL ++P Y D+Q + ++ D + G
Sbjct: 4 LDDPITMLAGVGEKRAASLASLGIQTIEDLLTYYPFRYEDIQERNLNEIQDQEKVTLKGI 63
Query: 266 IISSRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
++S M + G S L+ + E +V N+ F
Sbjct: 64 VVSPPVMNRFGYKKSRLQFRMMQE---------HDVFNVS-------------------F 95
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ P+LK K + E + V GK A R + I + DD S P
Sbjct: 96 FNQPYLKE---KVILSEEIAVYGKWDAKRK----ALNGMKILGSQTMDDFS--------P 140
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
IY + + L D I + Q + +PK + +++ LL A +H PK+ +E
Sbjct: 141 IYHVNKSIRQTTLVDLIKKGFQEYGTLIEENLPKNLVEKYRLLDRASAVRSMHFPKNHEE 200
Query: 444 ADLARKRLIFDEFFYLQLGRLYQM-LEGL--GTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
A++R++F+EFF L+QM L+GL + E GL Y +L
Sbjct: 201 NHQAKRRVVFEEFF------LFQMRLQGLKKAEKAETNGLEILYDVQKL----------- 243
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
K+ + LP+ LT++Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G
Sbjct: 244 -KEFTQKLPFELTNAQKRVTNEICRDLRSPQHMQRLLQGDVGSGKTVVAAIALYATVTAG 302
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
+Q A MVPTE+LA QH E L +L D ++ +ALLTGST K+ R + + L+ G+I
Sbjct: 303 FQGALMVPTEILAQQHMESLQQLF-----DPNEVTVALLTGSTKTKERRELLEKLERGEI 357
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+LI + VEF L L I DEQ RFGV QR K +
Sbjct: 358 NVVIGTHALIQDGVEFQNLGLVITDEQHRFGVNQRKVLREKGW----------------- 400
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLA+ YG+M ++ I +LP GRIPI+T
Sbjct: 401 ------RPDVLFMTATPIPRTLAITAYGEMDVSIIDELPAGRIPIET 441
>gi|404496638|ref|YP_006720744.1| ATP-dependent DNA helicase RecG [Geobacter metallireducens GS-15]
gi|418066690|ref|ZP_12704049.1| ATP-dependent DNA helicase RecG [Geobacter metallireducens RCH3]
gi|78194241|gb|ABB32008.1| ATP-dependent DNA helicase RecG [Geobacter metallireducens GS-15]
gi|373560003|gb|EHP86279.1| ATP-dependent DNA helicase RecG [Geobacter metallireducens RCH3]
Length = 767
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 174/536 (32%), Positives = 254/536 (47%), Gaps = 85/536 (15%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFIG 264
L+ I + G+ +L L G T+ L+ P Y D + L G +F G
Sbjct: 65 LETPIQFIKGVGPKLAETLGKKGIATVEDALYLLPNRYEDRRQVVPIARLCPGVTSVFSG 124
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
E+I++ + F EV+V D T + N + KK + K+ RG F
Sbjct: 125 EVITADVVSTKGGRRFFEVVV----RDASGTISFKWFNFNPAFLKKTW---KEGRRGI-F 176
Query: 325 TSI--PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
T + F E H E++ V ++ + D +S GR
Sbjct: 177 TGLVSQFGLQREVHHPDAEWLAEGETVASVMAR----------------DPVSF---GRV 217
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANFD-PVPKEITQEFGLLCLFDAYMGIH----- 436
P+YP GL+ LR + + + + +P E+ GLL L DA +H
Sbjct: 218 VPVYPLTEGLHQKTLRKVMKGVVDQYASCVESALPLEVAGRQGLLPLSDALRRVHFPDSD 277
Query: 437 -QPKHIDEA-DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYM 494
P+ ++E D A + L+FDEFF+L+LG L K R L +
Sbjct: 278 ADPRGLEEGKDPANRTLVFDEFFFLELG-----------------LAMKKRGVTLESGIA 320
Query: 495 EGWS-SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLAC 553
S + TK LL+ LP+SLT +Q ++EI D+ P PM+RL+QGDVGCGKT+VA +A
Sbjct: 321 FTVSHTYTKPLLKLLPFSLTGAQRRVLAEIKEDMMAPHPMHRLVQGDVGCGKTLVALMAA 380
Query: 554 MEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRK 613
+ + +GYQ A M PTE+LA QHY ++ + D + + L+T S K + +
Sbjct: 381 LVAVENGYQVAIMAPTEILAEQHYLNIHRWCDEL-----GVSVTLVTSSLKGKAKKDALE 435
Query: 614 DLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAM 673
+ G+ +VIGTH++I +KVEF L L IVDEQ RFGV+QRG K
Sbjct: 436 RVAGGEAQIVIGTHAVIQDKVEFHRLGLGIVDEQHRFGVLQRGLLRKK------------ 483
Query: 674 VNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYI 729
P +L M+ATPIPRTLA+ ++GD+SL+ I +LPPGR PI+T I
Sbjct: 484 -----------GENPDILVMTATPIPRTLAMTVFGDLSLSVIDELPPGRTPIETRI 528
>gi|72161050|ref|YP_288707.1| ATP-dependent DNA helicase RecG [Thermobifida fusca YX]
gi|71914782|gb|AAZ54684.1| ATP-dependent DNA helicase RecG [Thermobifida fusca YX]
Length = 733
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 163/521 (31%), Positives = 247/521 (47%), Gaps = 84/521 (16%)
Query: 229 GFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCE 288
G +T+ LL H+PR Y D + DLD G+ G + L ++ C
Sbjct: 24 GLHTVGDLLRHYPRRY-DRRGELTDLD---------------GLVEGEQVTVLAEVLTCT 67
Query: 289 IADTETTSGD--EVVNIDS-GQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCV 345
+ G EVV D G+ ++ H + R + + G+ G F
Sbjct: 68 VRPMRQRRGSILEVVVTDGRGRLSLLFFHRVGWHRD---------RLLPGRR--GLF--- 113
Query: 346 SGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY-----PIYPSKGGLNASLLRDT 400
+GKV R EY + E D +++ + R Y PIYP+ + + +
Sbjct: 114 AGKVSVYRGRRQLAHPEYELF----ESDDAIQERARTYADTLIPIYPATEKITSWKIAKA 169
Query: 401 IARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQ 460
+A L L DP+P ++ GL+ L +AY IH PK D+ ARKRL +DE F +Q
Sbjct: 170 VATVLDILGDLPDPLPADLRARHGLVSLSEAYRLIHTPKDWDDVRAARKRLKWDEAFVIQ 229
Query: 461 LGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAI 520
+ L Q Q + +PR++ ++ + + LP++LT Q
Sbjct: 230 VA-LAQRRRTAQRQPAQP-------RPRISGGILDAFDA-------NLPFTLTDGQREVG 274
Query: 521 SEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHL 580
I DL PM+RLLQGDVG GKT+VA A ++V+ +G QAA + PTE+LA QH+ +
Sbjct: 275 EVISADLASDHPMHRLLQGDVGAGKTLVALRAMLQVVDAGGQAALLAPTEVLAQQHHRSI 334
Query: 581 LKLL------DNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKV 634
++L ++ + ++ALLTGS R D +G +VIGTH+L+ E+V
Sbjct: 335 TEMLGPLARAGQLDGAEQATRVALLTGSLGAAARREALLDAASGRAGIVIGTHALLQEQV 394
Query: 635 EFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMS 694
F+ L L ++DEQ RFGV QR K ++ G PHVL M+
Sbjct: 395 TFADLGLVVIDEQHRFGVEQRDALRDK-------------STRGR--------PHVLVMT 433
Query: 695 ATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
ATPIPRT+A+ +YGD+ + + LP GR PI T+++ +K
Sbjct: 434 ATPIPRTVAMTVYGDLDVVALRQLPAGRSPIATHVVPSRDK 474
>gi|383788431|ref|YP_005473000.1| ATP-dependent DNA helicase RecG [Caldisericum exile AZM16c01]
gi|381364068|dbj|BAL80897.1| ATP-dependent DNA helicase RecG [Caldisericum exile AZM16c01]
Length = 790
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 175/531 (32%), Positives = 251/531 (47%), Gaps = 92/531 (17%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFIGEIIS 268
+ V G+ L +L+ G T+ L++FP+ Y DL+N + L +G+ + +IIS
Sbjct: 111 VQFVKGIGPELAKKLKKIGVETVYDFLYYFPKAYLDLRNIRKIFSLKNGETVLLKVKIIS 170
Query: 269 SRGMKAGCS-FSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ K + FS L T+ T + T F
Sbjct: 171 IQERKGKLNIFSVL---------GTDGTG---------------------YITATWFNQ- 199
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYP 387
P+LK+I K G V + GKV+ EY I +D L R P+YP
Sbjct: 200 PYLKNI---FKEGMEVFLFGKVQFAYGKWEMPSPEYEIP----QDGKELVHTLRITPLYP 252
Query: 388 SKGGLNASLLRDTIARALQALPAN-FDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL 446
GL+ +LR+ ++ + FD + +EI + L+ L A +H P+ D
Sbjct: 253 LTEGLSQKILRNKTLNLIENVGKKIFDYLDEEIIKRRNLVSLDYAISNVHFPESFDALKK 312
Query: 447 ARKRLIFDEFFYLQ--LGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
A++R+IFDE F LQ L + ++E E +G + ++ ++ Y
Sbjct: 313 AKERIIFDELFGLQYILSKRKHVIE------ESDGYVFDVKEEYVSEFY----------- 355
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
+ LP+ LTS Q + EI+ DLK PMNRLL GDVG GKT+VA + +G+Q+A
Sbjct: 356 -KLLPFELTSDQKKVMGEILNDLKSSHPMNRLLHGDVGSGKTIVALFSMFISYKNGFQSA 414
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKP-KIALLTGSTPVKQSRMIRKDLQTGDITLV 623
M PTE+LA Q Y+ L K P +IALLT ST + I + L DI ++
Sbjct: 415 MMSPTEILAEQTYKTAESLF------KGTPIRIALLTSSTKNSARKKILQGLINHDIDVI 468
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
GTH+LI E V+F L L +VDEQ RFGV+QR S D
Sbjct: 469 FGTHALIEEGVQFKKLGLVVVDEQHRFGVIQR-----------------------SLLKD 505
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
+ + PH L MSATPIPRTLAL LYGD+ ++ I +LP GR+PI T + NE
Sbjct: 506 KAIIPHTLVMSATPIPRTLALTLYGDLDVSSIKELPKGRLPIITKVFYRNE 556
>gi|164688647|ref|ZP_02212675.1| hypothetical protein CLOBAR_02292 [Clostridium bartlettii DSM
16795]
gi|164603060|gb|EDQ96525.1| ATP-dependent DNA helicase RecG [Clostridium bartlettii DSM 16795]
Length = 686
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 165/536 (30%), Positives = 256/536 (47%), Gaps = 89/536 (16%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
LDK I V G+ + +L +T++ LL++FPR+Y D N I +I
Sbjct: 4 LDKNIQFVKGIGPKKASKLNKLNIFTIKDLLYYFPRSYEDRSN-------------IKKI 50
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
+ C+ + E+ E + +V K L + F F +
Sbjct: 51 WQLEHDEKACTKGII-----SEVKSHEAKNKIKVT--------KFTLRDETGFLNVVFFN 97
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
+L + K G+ V V GK++ R EM I+ + + + G+ PIY
Sbjct: 98 QDYLTKV---FKKGDSVIVYGKIK--REGGFLEMNSPQIEHFTN----AQTSTGKLIPIY 148
Query: 387 PSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
P G+ + +TI + +PK+I ++ L + A +H P+
Sbjct: 149 PLTYGVTNKDIINTIKNIYTNEKVSIQEYLPKDIINKYKLCSIDFAVKNLHMPQDKQSLK 208
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGL----GTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
+A R+IF+EF LQ+G L+ G+ G +FEK K +LN
Sbjct: 209 IALYRMIFEEFLILQIG-LFYFKSGIDNSEGIKFEK--------KEKLN----------- 248
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
++++LP++LT++Q A++E+I D+ MNRL+QGDVG GKT+VA L + +GY
Sbjct: 249 -DIIKSLPFNLTNAQSRALNEVIDDMVSENMMNRLVQGDVGSGKTIVAVLVLALSVLNGY 307
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q A M PTE+LA QHYE L + L + + I LL GS KQ + + ++ +
Sbjct: 308 QGALMAPTEILARQHYESLTQTLAPFDIN-----IDLLVGSLTKKQKEKVLEKIKNHETD 362
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
++IGTH+LI + VEF L + + DEQ RFGV QR + ++K G+
Sbjct: 363 ILIGTHALIEDNVEFDNLGVVVTDEQHRFGVRQRAKLSTK----------------GN-- 404
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGY 737
P +L M+ATPIPRTLAL LYGD+ ++ I +LPPGR PI T E ++ +
Sbjct: 405 -----NPDILVMTATPIPRTLALILYGDLDISIIDELPPGRQPIDTRAFESKKRDF 455
>gi|148263926|ref|YP_001230632.1| ATP-dependent DNA helicase RecG [Geobacter uraniireducens Rf4]
gi|146397426|gb|ABQ26059.1| ATP-dependent DNA helicase RecG [Geobacter uraniireducens Rf4]
Length = 829
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 171/542 (31%), Positives = 258/542 (47%), Gaps = 97/542 (17%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN-AQID-LDDGQYFIFIG 264
L+ + + G+ +L L G + L P Y D + A+I L G +F
Sbjct: 127 LETPMQFIKGVGPKLAENLAKKGVSVVEDALFLLPHRYEDRRTLAKIGRLRPGANEVFFA 186
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
E+I++ F EV VG G V + + H
Sbjct: 187 EVIAADAASTRGGKRFFEVTVG---------DGSGTVTLK-------WFHFNP------- 223
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY- 383
F+K I + G F +G+V ++ E+ ++ L + +DL+ G P
Sbjct: 224 ---AFMKKIWKPGRKGIF---TGEV--VQYGFQREVHHPEVEWLPEGEDLAAVMAGDPLS 275
Query: 384 -----PIYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQ 437
P+YP GL+ LR + A+ A+ + +P E+ L+ L A H
Sbjct: 276 FGRILPVYPLTEGLSQKTLRKVMKEAVDRFVADVENHLPLEVIGRHDLMPLDKALQAAHF 335
Query: 438 PKHIDEADL---------ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGL-LDKYRKP 487
P ++ADL A + L FDEFF+L+LG +K G+ L++
Sbjct: 336 PA--NDADLQTLNNGATAAHRTLAFDEFFFLELG----------LALKKNGIALEEGIDF 383
Query: 488 RLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTV 547
++ Y TK+LL+ LP+SLT++Q +SEI D+ P PM+RL+QGDVGCGKT+
Sbjct: 384 QVTHKY-------TKELLKLLPFSLTNAQRRVLSEIKNDMMAPHPMHRLVQGDVGCGKTL 436
Query: 548 VAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQ 607
VA +A + + + YQ A M PTE+LA QH+ ++ D + K+ALLT S K
Sbjct: 437 VALMAALVAVENDYQVAIMAPTEILAEQHFLNIHHWCDAL-----GVKVALLTSSLKGKA 491
Query: 608 SRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSM 667
+ +++ TG+ +VIGTH++I +KVEF L L I+DEQ RFGV+QRG K
Sbjct: 492 KKAALEEIATGNAQVVIGTHAVIQDKVEFRRLGLGIIDEQHRFGVLQRGILKKK------ 545
Query: 668 SSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P +L M+ATPIPRTLA+ ++GD+SL+ I +LPPGR P++T
Sbjct: 546 -----------------GQNPDILVMTATPIPRTLAMTVFGDLSLSVIDELPPGRTPVET 588
Query: 728 YI 729
I
Sbjct: 589 RI 590
>gi|154249701|ref|YP_001410526.1| ATP-dependent DNA helicase RecG [Fervidobacterium nodosum Rt17-B1]
gi|154153637|gb|ABS60869.1| ATP-dependent DNA helicase RecG [Fervidobacterium nodosum Rt17-B1]
Length = 776
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 174/527 (33%), Positives = 253/527 (48%), Gaps = 84/527 (15%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
LD I G+ L+ G T+ L+++FPR Y D + I + FI E
Sbjct: 101 LDTPIKYAKGVGPSREKLLKKLGIETIGDLINYFPRDYEDRRKI-IPI----VFIRENEK 155
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
++++G+ I E ++V I + + I + K+F
Sbjct: 156 VTTKGI----------------IKSVEKIKKGDLVIISALLQDGISQVVLKWFNQE---- 195
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREY--NIDVLKDEDDLSLRAKGRPYP 384
K +E K + + V VSG + R + I++ E LS + P
Sbjct: 196 ---FKELELKQLINKEVYVSGTPK----------RGFFGAIEIQNPEISLSNSPEREIIP 242
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
IYP L LR I + A+ D +P EI + LL + AY+G+H P+
Sbjct: 243 IYPLTENLTQKTLRKIIEDNISAVCNYQDVIPNEIVEIRKLLDIKRAYIGMHFPRSSFHQ 302
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
L+RKRL ++E QL EK G + A + G L +K
Sbjct: 303 KLSRKRLAYEELLLFQLALFISR-----KNVEKIGGI---------AKQLSG--QLAEKF 346
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
+ +LP+ LT++Q+ A +EI DL P PMNRLLQGDVG GKT+VA LA ++ +G+Q+A
Sbjct: 347 VNSLPFKLTNAQIRAHNEIRQDLMSPNPMNRLLQGDVGSGKTLVAELAIIDNYEAGFQSA 406
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
MVPT +LA QHY+ + L N+ ++ALL GST K+ I+ L+ GD+ ++I
Sbjct: 407 LMVPTSILAIQHYQKIFNHLTNL-----GIRVALLIGSTSQKEKDKIKFALKNGDLDVII 461
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+LI E V F+ L L I+DEQ RFGV QR SK G D
Sbjct: 462 GTHALIQEDVHFANLGLVIIDEQHRFGVKQREELISK----------------GKVVD-- 503
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
L M+ATPIPRTL+L LYGD+ ++ I ++PPGR IKT+ ++
Sbjct: 504 -----TLIMTATPIPRTLSLTLYGDLDVSIIDEMPPGRKEIKTFTLK 545
>gi|406920396|gb|EKD58467.1| hypothetical protein ACD_56C00117G0002 [uncultured bacterium]
Length = 719
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 174/572 (30%), Positives = 268/572 (46%), Gaps = 113/572 (19%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFIG 264
LD +S VP + KR LE G T+ LL HFP Y D + DL G+ +G
Sbjct: 4 LDSKLSEVPRIGKRYAPILEKLGLITIEDLLKHFPFRYEDYSERTLISDLSAGETVTVMG 63
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
E+ S+ ++ ++ +I C I+D ++G + ++ +
Sbjct: 64 EVSQSKLVR---TWKKKMMITECHISD------------ETGTVRAVWFNQ--------- 99
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRA-----MRSNNHYEMREYNIDVLKDEDDLSLRA- 378
P++ K G+ V +SGKV SN +E LS R
Sbjct: 100 ---PYVSDSLTK---GKGVRLSGKVAKDLKGLFFSNPAWE--------------LSSREP 139
Query: 379 --KGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIH 436
GR P+YP G+++ +R + ++ D +P+ I + L L A IH
Sbjct: 140 TNTGRLVPVYPETEGVSSRFIRWQLQTLIKHADEMEDSIPENILKGLHLPNLSQAIKLIH 199
Query: 437 QPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG 496
PK I + +LA+KR F + + +Q+ + + ++K+ NA +
Sbjct: 200 FPKTIRDCELAQKRFAFQQMYLVQIAS-----QRVKIAWDKQ-----------NAVTIAF 243
Query: 497 WSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEV 556
+ KK + +LP+SLT +Q A +I DL++P+PMNRLL GDVG GKTVVA +A +
Sbjct: 244 NENFIKKFVSSLPFSLTDAQRKAAFQIFKDLEKPMPMNRLLNGDVGSGKTVVAAMASLAT 303
Query: 557 IGSGYQAAFMVPTELLATQHYEHLLKLLDNME---------------------EDKHKPK 595
G+Q A + PTE+LA QH E L KL N + ++ H K
Sbjct: 304 ANEGFQVAILAPTEVLARQHLESLTKLFSNQDISIGLLTNSYQMVVQESRIKNQESHNSK 363
Query: 596 IAL-----LTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRF 650
+ L+ S ++ +I K LQ G I ++IGTH++I E V+F L L IVDEQ RF
Sbjct: 364 FMIHDSKNLSVSKNSQKKELIEK-LQQGAINVIIGTHAIIQESVKFKNLALVIVDEQHRF 422
Query: 651 GVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDM 710
GV QR + G+ +N DG P PH+L+M+ATPIPRTL LA +G++
Sbjct: 423 GVAQRA---------FLQQGIEKIN-DGLPGK----IPHLLSMTATPIPRTLTLAFFGNL 468
Query: 711 SLTQITDLPPGRIPIKTYII--EGNEKGYENV 740
+L+ + ++P R I T ++ +K Y+ V
Sbjct: 469 NLSVLNEMPKNRKIIITEMVGASSRQKTYDFV 500
>gi|310779483|ref|YP_003967816.1| ATP-dependent DNA helicase RecG [Ilyobacter polytropus DSM 2926]
gi|309748806|gb|ADO83468.1| ATP-dependent DNA helicase RecG [Ilyobacter polytropus DSM 2926]
Length = 684
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 166/539 (30%), Positives = 258/539 (47%), Gaps = 94/539 (17%)
Query: 214 VPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFIGEIISSRG 271
+ G++ + +L+N G TL L ++FPR Y D N + L +G+Y + G++
Sbjct: 16 LKGITDKSIEKLKNLGIVTLYDLFYYFPRNYEDRTNFKSINQLKEGEYAVIKGKLFGIET 75
Query: 272 MKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLK 331
++ + ++ +++D T E+V + +P+LK
Sbjct: 76 LRTRTR----KTMIKAKVSDG--TGFVELV----------------------WFQMPYLK 107
Query: 332 SIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG---RPYPIYPS 388
K+G+ G V+ R YN + E +KG PIY S
Sbjct: 108 K---SLKMGDEYIFIGNVK----------RGYNYQMTNPEYRKYAESKGVSKEILPIYSS 154
Query: 389 KGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA 447
N LR + AL + F + +P+EI +++ + A IH PK+ + + A
Sbjct: 155 NKDFNQRSLRKIVKTALDSYTELFQENIPEEILKKYSIADRKKALKDIHFPKNTRDIEEA 214
Query: 448 RKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAY-MEGWSSLTKKLLR 506
++R +E L+ G L EK +D N Y +E +L KK L
Sbjct: 215 KRRFAIEELLILETGIL-----------EKRFAIDSMN----NEMYVLEDNKNLVKKFLG 259
Query: 507 ALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFM 566
L YSLT +Q ++EI +L +NRLLQGDVG GKT+VA + + +I + YQ FM
Sbjct: 260 NLGYSLTKAQKRVVTEIYKELNNGKIINRLLQGDVGSGKTIVAVIMLLYMIENSYQGVFM 319
Query: 567 VPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGT 626
PTE+LATQHY L + D + E ++ LLTGS ++ I +D++ G I L++GT
Sbjct: 320 APTEILATQHY---LSIADTLLE--LGIRVELLTGSVKGRKKDAILEDIKNGKIDLIVGT 374
Query: 627 HSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHM 686
HSLI + VEF L L ++DEQ RFGV+QR + K +
Sbjct: 375 HSLIEDNVEFHKLGLIVIDEQHRFGVIQRKKLREK-----------------------GV 411
Query: 687 APHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN---EKGYENVYK 742
+++ MSATPIPR+LAL++YGD+ ++ I ++PPGR P+KT I + EK Y + K
Sbjct: 412 IANLIVMSATPIPRSLALSIYGDLDVSIIDEMPPGRTPVKTKWINSSSDAEKAYSFIQK 470
>gi|317129245|ref|YP_004095527.1| ATP-dependent DNA helicase RecG [Bacillus cellulosilyticus DSM
2522]
gi|315474193|gb|ADU30796.1| ATP-dependent DNA helicase RecG [Bacillus cellulosilyticus DSM
2522]
Length = 678
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 164/528 (31%), Positives = 259/528 (49%), Gaps = 93/528 (17%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGE 265
++++ +S + G+ R+ QLEN G T+++L+ H P Y D +A + + ++ E
Sbjct: 1 MMNQPVSKIHGVGPRMVEQLENMGIETVQQLIEHLPFRYED--HAVRRVTEAEH----EE 54
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHL--KKFFRGTR 323
I+ RG T + ++ K ++ + +
Sbjct: 55 RITVRG----------------------TVHSEPLLRFYGKNKSRLTVRVLVDGLLLQAV 92
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV---RAMRSNNHYEMREYNIDVLKDEDDLSLRAKG 380
F + P+LK + +GE + +SGK R M S + E N++ + L
Sbjct: 93 FFNQPYLKR---QISLGEVITLSGKFDRHRLMLSGGTLKTTENNVN-----EGLE----- 139
Query: 381 RPYPIYPSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPK 439
P+Y +G L + LR I +A + + P ++ + L+ + +H P
Sbjct: 140 ---PVYSIRGNLKITALRKIIQQAFTQFEGQMEEILPSQLLTSYRLMGRAETIHQLHFPT 196
Query: 440 HIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSS 499
I++ A++R+I++EF L+Q+ L + E+E + + +K + +E + +
Sbjct: 197 SIEKLKQAKRRMIYEEFL------LFQLKMQLFRKKEREAV--QGQKKFFSQNVIEEFKT 248
Query: 500 LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
LP+ LT++QL I EI+ DL+ MNRLLQGDVG GKTVVA A VI +
Sbjct: 249 -------KLPFPLTNAQLRVIDEILKDLQSEYRMNRLLQGDVGSGKTVVAACALFAVIQA 301
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
G Q A MVPTE+LA QH E L+ LL+ K+ LLTGST VK+ R I ++L+ G
Sbjct: 302 GLQGALMVPTEILAEQHKESLVDLLEPF-----GIKVQLLTGSTKVKERRAILEELREGK 356
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
I +++GTH+LI E V+F L L I DEQ RFGV QR K
Sbjct: 357 IDIILGTHALIQEGVDFKNLGLVITDEQHRFGVEQRRILRKK------------------ 398
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ P VL M+ATPIPRTLA++ +GDM ++ I ++P GR+P+ T
Sbjct: 399 -----GIRPDVLFMTATPIPRTLAISAFGDMDVSVIDEMPKGRLPVDT 441
>gi|384098528|ref|ZP_09999642.1| ATP-dependent DNA helicase RecG [Imtechella halotolerans K1]
gi|383835223|gb|EID74650.1| ATP-dependent DNA helicase RecG [Imtechella halotolerans K1]
Length = 704
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 169/511 (33%), Positives = 258/511 (50%), Gaps = 87/511 (17%)
Query: 228 CGFYTLRKLLHHFPRTYAD----LQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEV 283
G + + LLH FP Y D + Q+ ++ + I IG+II + ++ G F +
Sbjct: 28 LGIHQYQDLLHFFPNRYIDKTQYYKINQLQRNNAEVQI-IGKIIHLKMVETGNK-GFGKR 85
Query: 284 IVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFV 343
+V + DT G+ + ++ FRG ++ I+ K+ E
Sbjct: 86 LVATFVDDT-------------GEMELVW------FRGHKW--------IKDSLKINEPY 118
Query: 344 CVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGL-NASLLRDTIA 402
V G+ N + M +++++ E + SLR +P +YPS L N + I
Sbjct: 119 VVFGRCNWF--NGVFSMPHPEMELMR-EHEQSLRTAMQP--VYPSTEKLTNKGITNRVIN 173
Query: 403 RALQALPAN-----FDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFF 457
+ +Q L + +PK I +E L+ +A IH PK + A+ RL F+E F
Sbjct: 174 QLMQELFNESGVRFHESLPKSIIEELHLISKAEALFNIHFPKSQELLAKAQFRLKFEELF 233
Query: 458 YLQLGRLYQMLEGLGTQFEKEGLLDKYR-KPRLNAAYMEGWSSLTKKLLRALPYSLTSSQ 516
++QL Q ++ LL K R K + E +S LP+ LT++Q
Sbjct: 234 FIQL------------QLVRKNLLHKQRIKGFVFDKVGELFSDFYNN---HLPFELTNAQ 278
Query: 517 LSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQH 576
I EI D+ MNRLLQGDVG GKT+VA ++ + I +G+QA M PTE+LATQH
Sbjct: 279 KRVIKEIRNDMGSNAQMNRLLQGDVGSGKTIVALMSMLLAIDNGFQACIMAPTEILATQH 338
Query: 577 YEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEF 636
Y +++LL + + + LLTGST R I + L+ G + ++IGTH+++ +KV+F
Sbjct: 339 YNGIMELLKELPVN-----VQLLTGSTKAADRREIHEQLENGLLHILIGTHAVLEDKVQF 393
Query: 637 SALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSAT 696
L LAI+DEQ RFGV QR +KL++ + M PH+L M+AT
Sbjct: 394 QNLGLAIIDEQHRFGVAQR----AKLWHKNT------------------MPPHILVMTAT 431
Query: 697 PIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
PIPRTLA++LYGD+ ++ I +LPPGR PIKT
Sbjct: 432 PIPRTLAMSLYGDLDVSVIDELPPGRKPIKT 462
>gi|291563511|emb|CBL42327.1| ATP-dependent DNA helicase RecG [butyrate-producing bacterium
SS3/4]
Length = 684
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 166/534 (31%), Positives = 251/534 (47%), Gaps = 97/534 (18%)
Query: 208 DKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEII 267
D+ I + G+ ++ E G T+ LLH++PR Y + IGE+
Sbjct: 4 DQSIETLKGIGEKTAKLFEKVGIRTIDDLLHYYPRGYDTYGEPKA----------IGELS 53
Query: 268 SSRG------MKAGCSFSFLE--VIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFF 319
+K+G + + IV I+D +G+ + ++ H+
Sbjct: 54 EDETGTVEGFLKSGATGVHVNGLSIVQATISDM------------TGKLRLVWYHM---- 97
Query: 320 RGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAK 379
P+LK+ F+ + R +R N M + + K E L +
Sbjct: 98 --------PYLKNT--LRPDSHFIF---RGRVIRKKNGLTMEQPQM--FKPEAYEELLSS 142
Query: 380 GRPYPIYPSKGGLNASLLRDTIARAL--QALPANFDPVPKEITQEFGLLCLFDAYMGIHQ 437
RP +Y GL ++ + +AL + L ++ P I E A IH
Sbjct: 143 MRP--VYAQTKGLGNKMITSAVEQALAFRTLERDYLPAGLRIANELAEYNF--AIEHIHF 198
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGW 497
P + +E ARKRL++DEFF+ L + L + R+ + +ME
Sbjct: 199 PSNEEELKFARKRLVYDEFFFFLLAVRH---------------LKEKRQNVQSPFHMEKQ 243
Query: 498 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
+KLL LPY LT++QL + E++ DLK MNRL+QGDVG GKT++A LA +
Sbjct: 244 DE-CRKLLADLPYRLTNAQLRTLEEVLRDLKSGSVMNRLIQGDVGSGKTIIAVLALLAAC 302
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
+GYQ A MVPTE+LA QH+E + +L + DK K+ LLTGS K+ R+ + + +
Sbjct: 303 ENGYQGALMVPTEVLARQHFESVTELFEKHGVDK---KVILLTGSMTAKEKRIAYEKVAS 359
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
+ ++IGTH+LI EK+ + L L I DEQ RFGV QR F +K
Sbjct: 360 HEADIIIGTHALIQEKIVYDNLALVITDEQHRFGVAQREMFGNK---------------- 403
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
PHVL MSATPIPRTLA+ LYGD+ ++ I +LP R+PIK +++
Sbjct: 404 -------GQMPHVLVMSATPIPRTLAIILYGDLDISVIDELPANRLPIKNCVVD 450
>gi|338706640|ref|YP_004673408.1| DNA helicase RecG [Treponema paraluiscuniculi Cuniculi A]
gi|335344701|gb|AEH40617.1| DNA helicase RecG [Treponema paraluiscuniculi Cuniculi A]
Length = 686
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 137/360 (38%), Positives = 198/360 (55%), Gaps = 27/360 (7%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHID 442
P+YP GL LR I A+ D +PK I +++ LL D + +H P+ +D
Sbjct: 145 PVYPLTKGLKQMKLRKLICAAMDQWIGTVDSELPKPILEKYHLLTKRDVLLSMHTPRTLD 204
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
+ + LIF+EFF LQ+ + L+ G +G D+ + + S L K
Sbjct: 205 DVAKGKHSLIFEEFFSLQMAIGMRSLQKRGRLPLTQGESDQ---QSVIPPVVSKLSLLQK 261
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
KL R LP+ LT Q I+EI DL++ PM RL+QGDVG GKT+VAF +C+++I G Q
Sbjct: 262 KLHRCLPFELTVDQKRVITEITQDLEREEPMARLIQGDVGSGKTLVAFFSCLKIIEQGGQ 321
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
A + PTELLA QH + +LL + ++A LTG+ + + + L G+I L
Sbjct: 322 VALLAPTELLARQHADTAARLLAPI-----GIRLAFLTGNMKSEGRAYLLEALAAGEINL 376
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
V+GTH+L ++ V + LRL I+DEQ RFGV+QR S + +G+P
Sbjct: 377 VVGTHALFSKSVRYHDLRLVIIDEQHRFGVLQR-------------SALIQKGREGNP-- 421
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN--EKGYENV 740
Q PH++ MSATPIPRTLAL+++GD+ ++ I +P GR P+ TYI EK YE V
Sbjct: 422 -QGKTPHIIMMSATPIPRTLALSVFGDLDISIIKSMPGGRKPVITYIARKTKAEKVYEFV 480
>gi|329121239|ref|ZP_08249866.1| DNA helicase RecG [Dialister micraerophilus DSM 19965]
gi|327470173|gb|EGF15636.1| DNA helicase RecG [Dialister micraerophilus DSM 19965]
Length = 678
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 164/532 (30%), Positives = 249/532 (46%), Gaps = 93/532 (17%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYAD------LQNAQIDLDDGQY- 259
L+ + V + +++ +L T+ L++ FPR Y D ++N I + Y
Sbjct: 3 LEDSVMKVKCVGPKMFEKLGKLNIKTVEDLINFFPRKYQDWSKITPMENIVIGEECLIYG 62
Query: 260 -FIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKF 318
+ I E I RGM+ L VI+ I T ++ S +KK+
Sbjct: 63 KIVKIDERILRRGMR------LLSVILTDNINSVTLTYFNQ-----SWKKKQF------- 104
Query: 319 FRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRA 378
+ E + GKV + Y++ I+ + E+ L+
Sbjct: 105 -------------------NINEEILAYGKVEYLYG--KYQISNAEIEAVPKEN---LKN 140
Query: 379 KGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQP 438
+ PIYP G+ A+ +R IA AL+ + + +P EI A +H P
Sbjct: 141 FEKLVPIYPLTEGITATQMRSMIAFALKNVSNLKENLPIEILTRENFPDKLLAVKMLHNP 200
Query: 439 KHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWS 498
K+ E + ARKRL F+E F++Q G L +L + RK
Sbjct: 201 KNYKEKETARKRLAFEELFFMQAGIL---------------MLKEKRKINSYGIKCSPSG 245
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
L K +L P+ LT Q A S+I D++ PM RLLQGDVG GKT +A L +++
Sbjct: 246 KLVKSVLNKFPFELTKDQKKAFSDIENDMEDIEPMYRLLQGDVGSGKTAIAALTAAKIVE 305
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+GYQA M PTE+LA+QHY+ L L N+ + IA L+G+ + ++ L++G
Sbjct: 306 NGYQATLMAPTEVLASQHYKTFLNLYKNLSVE-----IAYLSGNIKNSEREVLLNKLKSG 360
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+I ++IGTH+LI V+F+ L L I DEQ RFGV QR ++ + G
Sbjct: 361 EIDILIGTHALIENNVKFAHLGLVITDEQHRFGVKQR----------------ELLETKG 404
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
PHVL M+ATPIPRT+AL++YGD+ + I +P GR P+KTY+I
Sbjct: 405 E-------NPHVLVMTATPIPRTMALSVYGDLDASVINQMPIGRKPVKTYVI 449
>gi|115377219|ref|ZP_01464431.1| ATP-dependent DNA helicase RecG [Stigmatella aurantiaca DW4/3-1]
gi|310821200|ref|YP_003953558.1| ATP-dependent DNA helicase RecG [Stigmatella aurantiaca DW4/3-1]
gi|115365802|gb|EAU64825.1| ATP-dependent DNA helicase RecG [Stigmatella aurantiaca DW4/3-1]
gi|309394272|gb|ADO71731.1| ATP-dependent DNA helicase RecG [Stigmatella aurantiaca DW4/3-1]
Length = 898
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 171/538 (31%), Positives = 256/538 (47%), Gaps = 93/538 (17%)
Query: 217 LSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFIGEIISSRGMKA 274
L RL L+ G + +L PR Y D + + +L+ G + +G + ++ +
Sbjct: 215 LGPRLLGALDKKGLRRVGDILFLLPRCYEDRRKLKTIAELEPGGRGVTVGLVKTADYVSG 274
Query: 275 GCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIE 334
+ + +V AD SG Y H + + RFT
Sbjct: 275 RNGKRYFKAVV----ADR------------SGSIAATYFHAGPWLK-NRFT--------- 308
Query: 335 GKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNA 394
VG+ + +SG+VRA S EM I+ +D + S+ R PIYP +
Sbjct: 309 ----VGKRLVLSGEVRASLSGR--EMAHPEIEPAEDLESSSVHFN-RIVPIYPGFERGDQ 361
Query: 395 SLLRDTIARALQALPANFD-PVPKEITQEFGLLCLFDAYMGIHQP---KHIDEADL---- 446
R+ +R + + + P+P+ + + GL+ L +A IH P H++ D
Sbjct: 362 RSFREVASRVSENYAQHIEEPLPEALRKRLGLVALPEALRSIHFPPDTAHLEALDAHQSP 421
Query: 447 ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEK--EGLLDKYRKPRLNAAYMEGWSSLTKKL 504
+ +RL FDE F+LQLG GL Q K +G+ R++ A
Sbjct: 422 SHRRLAFDELFFLQLGM------GLKRQNVKTEQGIAFNVSPERVDRARG---------- 465
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
ALP++LT +Q + E+ D+ +P PMNRL+QGDVG GKT VA +A + + GYQ A
Sbjct: 466 --ALPFALTGAQARVVEELAQDMARPEPMNRLVQGDVGSGKTAVAVVASLLALQDGYQVA 523
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
M PTE+LA QH KLL+ + ++ L++ + K R +R+ L G+I L +
Sbjct: 524 VMAPTEILAEQHERSFRKLLEPL-----GFRVGLVSAAGTAKHKREVREALAQGEIHLAV 578
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+LI V F L LA++DEQ RFGV+QR +T MS G
Sbjct: 579 GTHALIQGGVAFERLGLAVIDEQHRFGVLQR--------HTLMSKG-------------- 616
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYK 742
P VL M+ATPIPRTLA+ LYGD+ ++ I +LPPGR P+ T + NE+ VY+
Sbjct: 617 -PTPDVLVMTATPIPRTLAMTLYGDLDVSIIDELPPGRTPVATRVF--NEQQRARVYE 671
>gi|357420137|ref|YP_004933129.1| ATP-dependent DNA helicase RecG [Thermovirga lienii DSM 17291]
gi|355397603|gb|AER67032.1| ATP-dependent DNA helicase RecG [Thermovirga lienii DSM 17291]
Length = 693
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 172/530 (32%), Positives = 242/530 (45%), Gaps = 91/530 (17%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYAD---LQNAQIDLDDGQYFIFI 263
L I + G+ + G T+ LL PR Y D L N L+ G+ F+
Sbjct: 9 LSSPIQYLKGVGPVRARKFRKLGVETVEDLLWFMPRRYEDRSKLSNLS-SLEPGETKAFL 67
Query: 264 GEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTR 323
++S KA I+ T G F +
Sbjct: 68 ARVVSIEERKAKRR--------NLTISTALLTDGS------------------SFVQAVW 101
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY 383
F P LKS+ + G V V GK+ E+ + DED S G
Sbjct: 102 FNR-PGLKSV---LEPGTKVAVYGKIEIREGIKQVNNGEFEV---LDEDS-SPENVGMIV 153
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHID 442
P+YP GL +R + AL+ + DP+P +I ++ F A +H P +
Sbjct: 154 PVYPGTQGLVQKWIRKIVKEALRLIEEEVEDPLPIDILTKYDYPDFFRAIKEMHFPSSRE 213
Query: 443 EADLARKRLIFDEFFYLQLG----RLYQMLEGLGTQFEKEG-LLDKYRKPRLNAAYMEGW 497
AR RL F E F LQLG R + + G +F G L+D +
Sbjct: 214 SWLAARNRLAFQELFLLQLGLAVRRRSYVEDNKGHKFNVNGPLVDAF------------- 260
Query: 498 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
+ + LP+ LT +Q SEI D+ + +PMNRLLQGDVG GKTV+A L + I
Sbjct: 261 ------IHKVLPFKLTDAQKRVFSEIRDDVSKEIPMNRLLQGDVGSGKTVIAILFMLCAI 314
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
SGYQAAFM PTE+LA QH+E + K L + K++LLTGS P + R+I +++
Sbjct: 315 DSGYQAAFMAPTEVLAKQHFEKIHKWLTPL-----GVKVSLLTGSVPSAEKRIIYEEVSN 369
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
G + +V+GTH+LI + + F L ++DEQ RFGV+QRG K
Sbjct: 370 GLVNIVVGTHALIQDNLAFRNLGAVVIDEQHRFGVLQRGILADK---------------- 413
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+H PHVL M+ATPIPRTL L++YGD+S++ I ++PPGR I T
Sbjct: 414 -----GEH--PHVLVMTATPIPRTLTLSVYGDLSVSVIDEMPPGRKDIIT 456
>gi|363892790|ref|ZP_09319943.1| ATP-dependent DNA helicase RecG [Eubacteriaceae bacterium CM2]
gi|361962554|gb|EHL15668.1| ATP-dependent DNA helicase RecG [Eubacteriaceae bacterium CM2]
Length = 672
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 158/533 (29%), Positives = 259/533 (48%), Gaps = 105/533 (19%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L+ + +P + ++ L+N G T+ LLH+FPR Y +D F + EI
Sbjct: 3 LNDNVINLPKIGEKKQKVLQNMGVSTIYDLLHYFPRKY----------EDRSIFKKLNEI 52
Query: 267 ISSR--GMKAG------CSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKF 318
+ +KA + F + I+ ++D +T+ ++ N
Sbjct: 53 KAKEKASVKAKIIRFEKVNLKFKKSIINIYVSDDTSTACIKLFN---------------- 96
Query: 319 FRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRA 378
F +P L+ G ++ G ++ +Y++ ++N + E D + +
Sbjct: 97 ---NNFI-LPELEK-------GRYIFFYG-----QAEENYDLLQFNSPEI--EFDKAEKK 138
Query: 379 KGRPYPIYPSKGGLNASLLRDTIARALQ-ALPANFDPVPKEITQEFGLLCLFDAYMGIHQ 437
G YPIYP G+ S + + +++ A + + +P E +++ L+ +DA IH
Sbjct: 139 IGMIYPIYPLSNGIKNSEILSAVKYSIENADMTSLEYLPNEYLEKYRLIPTYDAIKNIHM 198
Query: 438 PKHIDEADLARKRLIFDEFFYLQL---GRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYM 494
PK+I+ +R R IF+EFF L + + + + +G +F+K
Sbjct: 199 PKNINILKQSRYRCIFNEFFELNIFLNAQKSNVQKSVGIKFKKS---------------- 242
Query: 495 EGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACM 554
E + + KKL P+ LT++Q + +I D+ + VPM RL+QGDVG GKT+VAFL+
Sbjct: 243 ENINDIIKKL----PFELTNAQKKVLDDIFSDMNKDVPMRRLIQGDVGSGKTIVAFLSIY 298
Query: 555 EVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKD 614
+GYQ+ FMVPTE+LA QHYE+ L N + K+ LL GST K + ++
Sbjct: 299 NSCMNGYQSVFMVPTEVLAVQHYENALDFFKNTD-----IKVKLLIGST--KNKTKLYEE 351
Query: 615 LQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMV 674
++ G++ +VIGT +LI +KV F L L I DEQ RFGV QR + K
Sbjct: 352 IENGEVNVVIGTQALIQDKVIFKKLGLVITDEQHRFGVNQRKKLEEK------------- 398
Query: 675 NSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ P ++ MSATPIPRTL+L ++ D+ ++ I +LP R+PIKT
Sbjct: 399 ---------SNENPDIIVMSATPIPRTLSLVIHKDLDVSVIGELPQNRLPIKT 442
>gi|385678581|ref|ZP_10052509.1| ATP-dependent DNA helicase RecG [Amycolatopsis sp. ATCC 39116]
Length = 717
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 166/525 (31%), Positives = 245/525 (46%), Gaps = 87/525 (16%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIV 285
E+ +T+ LL H+PR YA+ GE+ + I
Sbjct: 22 ESLDIHTVADLLRHYPRRYAER----------------GELTN---------------IA 50
Query: 286 GCEIADTETTSGD-EVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFL---KSIEGKHKVGE 341
G EI + T E VN+ + K ++ G R S F E + ++G
Sbjct: 51 GLEIGEHATVMARVEKVNLRRMRNKPGHILELVITDGQRRLSCAFFGRPHQHERQLRLGR 110
Query: 342 FVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTI 401
+GKV A R+ EY + + D+D G P+YP+ G+ + + +
Sbjct: 111 TGLFAGKVTAFRNTLQLANPEYQM-LDGDDDSAMDDFVGAIIPVYPAAAGMPSWSIARCV 169
Query: 402 ARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQL 461
+ L L DP+P+E+ GL+ LFDA IH+PK D + AR+RL +DE +QL
Sbjct: 170 RQVLDTLEREEDPMPRELLDSRGLMDLFDALHNIHRPKDHDALEAARERLKWDEAMAVQL 229
Query: 462 GRLYQMLEGL-----GTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQ 516
+ + +GLLD + + LP+ LT Q
Sbjct: 230 IFAQRRFSAVSRPAPACARTTDGLLDAFDQ--------------------RLPFELTEGQ 269
Query: 517 LSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQH 576
+ +I DL PMNRLLQG+VG GKTVVA A ++V+ SG QAA + PTE+LA QH
Sbjct: 270 RAVGEDIAADLSGEHPMNRLLQGEVGSGKTVVALRAMLQVVDSGRQAAMLAPTEVLAAQH 329
Query: 577 YEHLLKLLDNMEE------DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLI 630
L ++L ++ + ++ K+ LLTGS K+ + D +G +V+GTH+LI
Sbjct: 330 ARSLREMLGDLGQAGELGAAENATKVTLLTGSMSTKERKQALLDTASGAAGIVVGTHALI 389
Query: 631 AEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHV 690
+ V F+ L L +VDEQ RFGV QR S+ + GS PHV
Sbjct: 390 QDTVSFADLGLVVVDEQHRFGVEQRDALRSR------------AANGGS--------PHV 429
Query: 691 LAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
L M+ATPIPRT+A+ +YGD+ + + +P GR PIKT ++ EK
Sbjct: 430 LVMTATPIPRTVAMTVYGDLETSALRHMPVGRSPIKTSVVPVAEK 474
>gi|81428314|ref|YP_395314.1| ATP-dependent DNA helicase RecG [Lactobacillus sakei subsp. sakei
23K]
gi|78609956|emb|CAI55003.1| ATP-dependent DNA helicase, RecG [Lactobacillus sakei subsp. sakei
23K]
Length = 680
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 168/534 (31%), Positives = 253/534 (47%), Gaps = 93/534 (17%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L ++ + G+ + L G T+ LL++FP Y DL+ + Q E
Sbjct: 4 LTDSVTVLTGVGPKRLTALNQLGIATISDLLYYFPFRYEDLKVKDLSEAVDQ------EK 57
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHL--KKFFRGTRF 324
++ +G T D VV+ K ++ + L F
Sbjct: 58 VTLKG----------------------TVVADPVVSRWGPGKTRLNVRLLINHDVIMVTF 95
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ P+LK K + G + V GK A R++ + + ++ D+ S A
Sbjct: 96 FNQPYLKD---KFEAGVDIAVYGKWDARRNS----LTGVKVLAVQSADNPSFAA------ 142
Query: 385 IYPS----KGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKH 440
IY + + G L+R+ +P D +P +I + + L+ + G+H P+
Sbjct: 143 IYSTNKNVRQGTLVKLIREAFDNYQSVIP---DLIPADIRERYKLVSEVELIAGMHFPES 199
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
EA AR+ IF EFF QL Q+++ E GL Y+ NAA
Sbjct: 200 YPEAKQARRTAIFHEFFLYQLQ--LQVIKQADRHVEN-GLALPYQ----NAAL------- 245
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
K+ ++ LP+ LT +Q ++EI DLK P MNRLLQGDVG GKT+VA +A + +G
Sbjct: 246 -KEFIKTLPFDLTDAQKRVVNEICLDLKAPAHMNRLLQGDVGSGKTIVAAIAMFAAVTAG 304
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
+QAA MVPTE+LA QHY+ L KL M + LLTGST K+ R + D+++G I
Sbjct: 305 FQAALMVPTEILAEQHYQSLQKLYAPM-----NVTVGLLTGSTTAKERRTLLADIESGRI 359
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+++GTH+LI + V + L A++DEQ RFGV QR K
Sbjct: 360 NIIVGTHALIQDAVVYHKLGFAVIDEQHRFGVNQRRVLREK------------------- 400
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
+ P +LAM+ATPIPRTLA+ YG+M ++ I +LP GRIPI+T + N+
Sbjct: 401 ----GLQPDMLAMTATPIPRTLAITAYGEMDVSTIDELPKGRIPIETSWVRSNQ 450
>gi|431757907|ref|ZP_19546536.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E3083]
gi|430618412|gb|ELB55259.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E3083]
Length = 678
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 173/527 (32%), Positives = 253/527 (48%), Gaps = 95/527 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
LD I+ + G+ ++ L + G T+ LL ++P Y D+Q + ++ D + G
Sbjct: 4 LDDPITMLAGVGEKRAASLASLGIQTIEDLLTYYPFRYEDIQERNLNEIQDQEKVTLKGI 63
Query: 266 IISSRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
++S M + G S L+ + E +V N+ F
Sbjct: 64 VVSPPVMNRFGYKKSRLQFRMMQE---------HDVFNVS-------------------F 95
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ P+LK K + E + V GK A R + I + DD S P
Sbjct: 96 FNQPYLKE---KVILSEEIAVYGKWDAKRK----ALNGMKILGSQTMDDFS--------P 140
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
IY + + L D I + Q + +P + +++ LL A +H PK+ +E
Sbjct: 141 IYHVNKSIRQTTLVDLIKKGFQEYGTLIEENLPNNLVEKYRLLDRASAVRSMHFPKNHEE 200
Query: 444 ADLARKRLIFDEFFYLQLGRLYQM-LEGL--GTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
A++R++F+EFF L+QM L+GL + E GL Y +L
Sbjct: 201 NHQAKRRVVFEEFF------LFQMRLQGLKKAEKAETNGLEILYDVQKL----------- 243
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
K+ + LP+ LT++Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G
Sbjct: 244 -KEFTQKLPFELTNAQKRVTNEICRDLRSPQHMQRLLQGDVGSGKTVVAAIALYATVTAG 302
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
+Q A MVPTE+LA QH E L +L D ++ +ALLTGST K+ R + + L+ G+I
Sbjct: 303 FQGALMVPTEILAQQHMESLQQLF-----DPNEVTVALLTGSTKTKERRELLEKLERGEI 357
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+LI + VEF L L I DEQ RFGV QR K +
Sbjct: 358 NVVIGTHALIQDGVEFQNLGLVITDEQHRFGVNQRKVLREKGW----------------- 400
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLA+ YG+M ++ I +LP GRIPI+T
Sbjct: 401 ------RPDVLFMTATPIPRTLAITAYGEMDVSIIDELPAGRIPIET 441
>gi|431740685|ref|ZP_19529596.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E2039]
gi|430602768|gb|ELB40318.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E2039]
Length = 678
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 173/527 (32%), Positives = 253/527 (48%), Gaps = 95/527 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
LD I+ + G+ ++ L + G T+ LL ++P Y D+Q + ++ D + G
Sbjct: 4 LDDPITMLAGVGEKRAASLASLGIRTIEDLLTYYPFRYEDIQERNLNEIQDQEKVTLKGI 63
Query: 266 IISSRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
++S M + G S L+ + E +V N+ F
Sbjct: 64 VVSPPVMNRFGYKKSRLQFRMMQE---------HDVFNVS-------------------F 95
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ P+LK K + E + V GK A R + I + DD S P
Sbjct: 96 FNQPYLKE---KVILSEEIAVYGKWDAKRK----ALNGMKILGSQTMDDFS--------P 140
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
IY + + L D I + Q + +P + +++ LL A +H PK+ +E
Sbjct: 141 IYHVNKSIRQTTLVDLIKKGFQEYGTLIEENLPNNLVEKYRLLDRASAVRSMHFPKNHEE 200
Query: 444 ADLARKRLIFDEFFYLQLGRLYQM-LEGL--GTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
A++R++F+EFF L+QM L+GL + E GL Y +L
Sbjct: 201 NHQAKRRVVFEEFF------LFQMRLQGLKKAEKAETNGLEILYDVQKL----------- 243
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
K+ + LP+ LT++Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G
Sbjct: 244 -KEFTQKLPFELTNAQKRVTNEICRDLRSPQHMQRLLQGDVGSGKTVVAAIALYATVTAG 302
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
+Q A MVPTE+LA QH E L +L D ++ +ALLTGST K+ R + + L+ G+I
Sbjct: 303 FQGALMVPTEILAQQHMESLQQLF-----DPNEVTVALLTGSTKTKERRELLEKLERGEI 357
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+LI + VEF L L I DEQ RFGV QR K +
Sbjct: 358 NVVIGTHALIQDGVEFQNLGLVITDEQHRFGVNQRKVLREKGW----------------- 400
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLA+ YG+M ++ I +LP GRIPI+T
Sbjct: 401 ------RPDVLFMTATPIPRTLAITAYGEMDVSIIDELPAGRIPIET 441
>gi|409349319|ref|ZP_11232811.1| ATP-dependent DNA helicase RecG [Lactobacillus equicursoris CIP
110162]
gi|407878256|emb|CCK84869.1| ATP-dependent DNA helicase RecG [Lactobacillus equicursoris CIP
110162]
Length = 679
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 172/520 (33%), Positives = 254/520 (48%), Gaps = 93/520 (17%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGEIISS 269
++ + G+ + L++ G Y++ LL +FP Y +L+ +D L+DGQ +
Sbjct: 11 VTSLKGVGAKTGEALQSLGIYSIYDLLFYFPYRYDELETLPLDQLNDGQKVML------- 63
Query: 270 RGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLK--KFFRGTRFTSI 327
+G+ A + N +K ++ L+ F +
Sbjct: 64 KGIVATTPYQ----------------------NYFGYRKSRVSFKLRIDHDIIMVNFFNQ 101
Query: 328 PFL-KSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
P+L K +E VG+ V + GK Y++R+ ++ K + A PIY
Sbjct: 102 PWLSKQLE----VGQEVAIYGK---------YDLRKQSLSAYKLV--AAKNADNGMAPIY 146
Query: 387 PSKGGLNASLLRDTIARAL-QALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
+ L+ I +A+ + LP + VP EI Q++ LL D M +H PK+ DEA
Sbjct: 147 SVNRHIKQKKLQGLIDQAIAECLPGVGNAVPDEIRQKYRLLTDCDLVMAMHHPKNPDEAR 206
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLL 505
R+ +F EFF Q+ QM + + ++ G KY + A L
Sbjct: 207 AGRRSAVFREFFLFQM----QMAQLSSSNKKQIGHAKKYDLGEVAA------------LT 250
Query: 506 RALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAF 565
++LP+ L++ Q I+EI D+ M RLLQGDVG GKTVVA A I +GYQAA
Sbjct: 251 KSLPFELSADQKKVINEIFADMFIDKQMQRLLQGDVGSGKTVVAVFAIYGAITAGYQAAL 310
Query: 566 MVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIG 625
MVPTE+LA QH+ + ++L+ + ALLTGST + R I K+L G I +VIG
Sbjct: 311 MVPTEILANQHFRKISEMLEPF-----GVRCALLTGSTKAMERREIYKELADGMINVVIG 365
Query: 626 THSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQH 685
TH+LI +KV F L L I+DEQ RFGV QR +A++N K D
Sbjct: 366 THALIQDKVIFKKLGLVIIDEQHRFGVAQR---------------LALIN-----KGDH- 404
Query: 686 MAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
P +LAM+ATPIPR+LAL +YG+ L++I LP GR PI
Sbjct: 405 --PDILAMTATPIPRSLALTVYGETDLSEIRHLPAGRKPI 442
>gi|308177222|ref|YP_003916628.1| ATP-dependent DNA helicase RecG [Arthrobacter arilaitensis Re117]
gi|307744685|emb|CBT75657.1| putative ATP-dependent DNA helicase RecG [Arthrobacter arilaitensis
Re117]
Length = 729
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 169/535 (31%), Positives = 246/535 (45%), Gaps = 82/535 (15%)
Query: 217 LSKRLYHQLENC-GFYTLRKLLHHFPRTYADLQN----AQIDLDDGQYFIFIGEIISSRG 271
L K+ LE G+ T+ + L HFPR Y ++ A++ D+ + +S R
Sbjct: 18 LGKKNSAALEKAFGYTTVGEFLWHFPRRYVEVGELTPIAELPFDEHVTVVAQVVNVSQRQ 77
Query: 272 MKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLK 331
M + F F E T DE+ GQ+ K+ FF G + +
Sbjct: 78 MHSRRGFIF------------EVTVSDELSA--GGQELKM-----TFFNGYQART----- 113
Query: 332 SIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGG 391
+G SGKV + EY I D + +A RP PIYP+
Sbjct: 114 ----DLHIGTIAMFSGKVSWYQDYLQLSQPEYAIL------DEASQADPRPIPIYPASAK 163
Query: 392 LNASLLRDTIARALQALPANFDP--VPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARK 449
+ +RD + L+ P +P E+ A++ H PK I A +AR+
Sbjct: 164 MPNKRIRDLMGLLLEQFTDQNIPEFLPTEVLSSRHYPVRHQAFLDRHFPKEIKYAYVARQ 223
Query: 450 RLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALP 509
R F+E F LQL LG + + G +P L K LP
Sbjct: 224 RFAFEEAFLLQLA--------LGERGRQLGAQKAIARP-------PAPGRLAAKFDAQLP 268
Query: 510 YSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPT 569
+ LT Q+ I DL+Q PM+RLLQG+VG GKT+VA A ++VI +G QAA + PT
Sbjct: 269 FRLTEDQVLVGQHISADLEQSHPMHRLLQGEVGSGKTIVALRAILQVIDAGGQAALLAPT 328
Query: 570 ELLATQHYEHLLKLLDNMEE-----DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
E+LA QHY + K+L N+ E + +ALLTGS Q R + +G+ L+I
Sbjct: 329 EVLAAQHYASIRKMLGNLAEPGLFGEGEGTGVALLTGSAKTAQRREALLGIASGETGLII 388
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+L++++V+F+ L L +VDEQ RFGV QR +K T
Sbjct: 389 GTHALLSDQVQFAELGLVVVDEQHRFGVEQRDALRAKAGDT------------------- 429
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYEN 739
PH L M+ATPIPRT+A+ ++GD+ + I LP GR PI+T+I+ G+ +
Sbjct: 430 --VPHTLVMTATPIPRTVAMTVFGDLETSTIKRLPAGRAPIQTHIVPMQLSGFRD 482
>gi|15806915|ref|NP_295639.1| ATP-dependent DNA helicase RecG [Deinococcus radiodurans R1]
gi|6459700|gb|AAF11469.1|AE002030_8 DNA helicase RecG [Deinococcus radiodurans R1]
Length = 784
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 167/515 (32%), Positives = 245/515 (47%), Gaps = 92/515 (17%)
Query: 223 HQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFIGEIISSRGMKAGCSFSF 280
+L G +TLR +LH +P + D + D+++GQ +G ++S
Sbjct: 122 RKLSTLGLHTLRDVLHAYPHRHEDRRALPDLADVEEGQKVTVMGTVVSKFRRAPRPGMLI 181
Query: 281 LEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVG 340
LE+++ ET SG V + T F P+ +E + + G
Sbjct: 182 LEIVL-------ETPSGGRV-------------------KATWFNQ-PW---VEKQLREG 211
Query: 341 EFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDT 400
+ ++G+ + + E+ V K E LS R R +Y +K G++ LR
Sbjct: 212 ARLVLTGRAKKFGRQTQLSV-EHMETVDKAEGSLSTR---RIVGVYDAKEGISQEFLRKA 267
Query: 401 IARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARK--RLIFDEFFY 458
+AL+A P + D +P +++GL L DA GIH P+ DEA LAR RL FDE+ +
Sbjct: 268 AYKALEAAPLD-DYLPAHWRRKYGLTDLGDALWGIHFPR--DEAQLARAHGRLRFDEYLF 324
Query: 459 LQLGRLYQMLEGL--GTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQ 516
L+L L Q + + G +FE G K ALP+ T++Q
Sbjct: 325 LELRMLLQGEDAVLQGKRFEARG-------------------EDINKFEAALPFRFTNAQ 365
Query: 517 LSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQH 576
+ EI D++ M RL+QGDVG GKT VA A + GYQ A M PTE+LA QH
Sbjct: 366 RRVLLEITDDMRSDQQMARLVQGDVGSGKTAVAACALYLAVRDGYQGALMAPTEILARQH 425
Query: 577 YEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEF 636
Y +L L ++ ++ LL G+ K ++ + GD+ +V+GT +LI E V+F
Sbjct: 426 YANLCGYLGQLD-----VRVGLLIGAMTPKAKLEMQTRIAEGDVDVVVGTQALIQENVQF 480
Query: 637 SALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSAT 696
L LA+VDE+ RFGV QR R + P VL MSAT
Sbjct: 481 DNLGLAVVDEEHRFGVQQRRRLLAS-------------------------RPDVLVMSAT 515
Query: 697 PIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
PIPR+LAL YGD+ L+ I +LPPGR PI+T +I+
Sbjct: 516 PIPRSLALTAYGDLELSIIDELPPGRTPIETKLIQ 550
>gi|424834144|ref|ZP_18258860.1| ATP-dependent DNA helicase RecG [Clostridium sporogenes PA 3679]
gi|365978919|gb|EHN14985.1| ATP-dependent DNA helicase RecG [Clostridium sporogenes PA 3679]
Length = 679
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 165/526 (31%), Positives = 252/526 (47%), Gaps = 92/526 (17%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
I+ + G+ + QLE C + + LL +FPR Y + N D
Sbjct: 7 ITTLKGVGPKTKEQLEKCMIFNIMDLLLYFPRDYEFIDNYNKD----------------- 49
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFL 330
K ++V V D T +G + I I+ +K G+ F P++
Sbjct: 50 --KLANKKVIIKVQVENIKRDVRTRTGKILTTI-------IFNDGEKAIVGSWFNQ-PYI 99
Query: 331 KSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKG 390
K+ KVGE + G +R R N + N +LK++ + + + P YP KG
Sbjct: 100 KNY---FKVGEEYILQGSLREYRGN----LTINNPQILKNKYAEKVEER-KIIPKYPLKG 151
Query: 391 GLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKR 450
L +LL + AL+ + + +P+ I +++ + L + IH+P++ E + + +R
Sbjct: 152 DLKNNLLIKLVNSALENIAIG-ENLPRWIIEKYKFISLDKSIRTIHKPENQKELEESIRR 210
Query: 451 LIFDEF--FYLQLGRLYQML----EGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
L F E + L++ L + L EG+G + +E T +
Sbjct: 211 LKFQELLAYCLKIASLKEYLKTATEGIGFKVSEE----------------------TSDI 248
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
+R LP+ LT++Q + EI D K+ PMNRLLQGDVG GKT++A + VI +GYQ
Sbjct: 249 IRTLPFKLTNAQNRVLEEIFKDQKKEKPMNRLLQGDVGSGKTIIALICLFNVIKNGYQGV 308
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
+ PTE+LA QHYE LKL + + I LL G + I++ L+ G+I L+I
Sbjct: 309 MLAPTEILAIQHYEEALKLFKDFNLN-----IELLVGGVKTSLKKEIKEKLKKGEIDLII 363
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+LI + VEF L + I DEQ RFGV+QR + ++ G ++
Sbjct: 364 GTHALIEDDVEFYNLGMVITDEQHRFGVMQRSKM--------LNKGRSI----------- 404
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
L MSATPIPRTL L+LYGD+ L+ I +LPPGR I TY +
Sbjct: 405 ----DTLVMSATPIPRTLTLSLYGDLDLSIIDELPPGRQKIDTYYV 446
>gi|383786907|ref|YP_005471476.1| ATP-dependent DNA helicase RecG [Fervidobacterium pennivorans DSM
9078]
gi|383109754|gb|AFG35357.1| ATP-dependent DNA helicase RecG [Fervidobacterium pennivorans DSM
9078]
Length = 778
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 172/529 (32%), Positives = 249/529 (47%), Gaps = 90/529 (17%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
LD I G+ L G T+ L+ FPR Y D + I L ++ E
Sbjct: 103 LDVPIKYAKGVGPAREKLLRKLGIQTIGDLISFFPRDYEDRRKV-IPL----MYVRENEK 157
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
I+++G+ + E T +++ + + + I + K+F
Sbjct: 158 ITTKGI----------------LKSVEKTKKGDLIIVSALLQDGINQVILKWFNQE---- 197
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVR-----AMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
K +E K VG V V+G V+ AM N E LS +
Sbjct: 198 ---FKEMELKQLVGREVYVTGSVKRGFFGAMEIQN-------------PEISLSDSPERT 241
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
PIYP L +R IA L ++ D +PKEI +E L+ ++ AY G+H PK
Sbjct: 242 ILPIYPLTENLTQRTIRKIIADNLPSICNLRDLIPKEILEERRLIDVWKAYTGMHFPKSS 301
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
++RKRL ++E Q LY L K ++ L
Sbjct: 302 FHYKISRKRLAYEELLLFQTA-LY---------------LSKRNVKQVGGIPKSFSGRLA 345
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
++ + LP+ LT++Q A +EI D++ P PMNRLLQGDVG GKT+VA LA ++ +GY
Sbjct: 346 EEFISKLPFKLTNAQKRAHAEIREDMRSPDPMNRLLQGDVGSGKTLVAELAIIDNYEAGY 405
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q+AFMVPT +LA QH++ L L + ++ALL GST ++ I+ L+ GD+
Sbjct: 406 QSAFMVPTSILAIQHFQKLFNHLTEL-----GIRVALLIGSTSQREKEKIKFALRNGDLD 460
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+V+GTH+LI E V F+ L L I+DEQ RFGV QR SK G
Sbjct: 461 VVVGTHALIQEDVHFANLGLVIIDEQHRFGVKQREELISK----------------GKVV 504
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
D L M+ATPIPRTL+L LYGD+ ++ I ++PPGR IKT+ +
Sbjct: 505 D-------TLIMTATPIPRTLSLTLYGDLDVSVIDEMPPGRKEIKTFTL 546
>gi|424763802|ref|ZP_18191267.1| ATP-dependent DNA helicase RecG [Enterococcus faecium TX1337RF]
gi|425054194|ref|ZP_18457707.1| ATP-dependent DNA helicase RecG [Enterococcus faecium 505]
gi|431081672|ref|ZP_19495762.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1604]
gi|431118135|ref|ZP_19498089.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1613]
gi|431592300|ref|ZP_19521536.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1861]
gi|402421978|gb|EJV54221.1| ATP-dependent DNA helicase RecG [Enterococcus faecium TX1337RF]
gi|403036462|gb|EJY47810.1| ATP-dependent DNA helicase RecG [Enterococcus faecium 505]
gi|430565604|gb|ELB04750.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1604]
gi|430568092|gb|ELB07149.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1613]
gi|430591925|gb|ELB29952.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1861]
Length = 678
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 173/527 (32%), Positives = 253/527 (48%), Gaps = 95/527 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
LD I+ + G+ ++ L + G T+ LL ++P Y D+Q + ++ D + G
Sbjct: 4 LDDPITMLAGVGEKRAASLASLGIQTIEDLLTYYPFRYEDIQERNLNEIQDQEKVTLKGI 63
Query: 266 IISSRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
++S M + G S L+ + E +V N+ F
Sbjct: 64 VVSPPVMNRFGYKKSRLQFRMMQE---------HDVFNVS-------------------F 95
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ P+LK K + E + V GK A R + I + DD S P
Sbjct: 96 FNQPYLKE---KVILSEEIAVYGKWDAKRK----ALNGMKILGSQTMDDFS--------P 140
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
IY + + L D I + Q + +P + +++ LL A +H PK+ +E
Sbjct: 141 IYHVNKSIRQTTLVDLIKKGFQEYGTLIEENLPNNLVEKYRLLDRASAVRSMHFPKNHEE 200
Query: 444 ADLARKRLIFDEFFYLQLGRLYQM-LEGL--GTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
A++R++F+EFF L+QM L+GL + E GL Y +L
Sbjct: 201 NHQAKRRVVFEEFF------LFQMRLQGLKKAEKAETNGLEILYDVQKL----------- 243
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
K+ + LP+ LT++Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G
Sbjct: 244 -KEFTQKLPFELTNAQKRVTNEICRDLRSPQHMQRLLQGDVGSGKTVVAAIALYATVTAG 302
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
+Q A MVPTE+LA QH E L +L D ++ +ALLTGST K+ R + + L+ G+I
Sbjct: 303 FQGALMVPTEILAQQHMESLQQLF-----DPNEVTVALLTGSTKTKERRELLEKLERGEI 357
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+LI + VEF L L I DEQ RFGV QR K +
Sbjct: 358 NVVIGTHALIQDGVEFQNLGLVITDEQHRFGVNQRKVLREKGW----------------- 400
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLA+ YG+M ++ I +LP GRIPI+T
Sbjct: 401 ------RPDVLFMTATPIPRTLAITAYGEMDVSIIDELPAGRIPIET 441
>gi|431739034|ref|ZP_19527974.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1972]
gi|430596577|gb|ELB34401.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1972]
Length = 678
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 173/527 (32%), Positives = 253/527 (48%), Gaps = 95/527 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
LD I+ + G+ ++ L + G T+ LL ++P Y D+Q + ++ D + G
Sbjct: 4 LDDPITMLAGVGEKRAASLASLGIRTIEDLLTYYPFRYEDIQERNLNEIQDQEKVTLKGI 63
Query: 266 IISSRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
++S M + G S L+ + E +V N+ F
Sbjct: 64 VVSPPVMNRFGYKKSRLQFRMMQE---------HDVFNVS-------------------F 95
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ P+LK K + E + V GK A R + I + DD S P
Sbjct: 96 FNQPYLKE---KVILSEEIAVYGKWDAKRK----ALNGMKILGSQTMDDFS--------P 140
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
IY + + L D I + Q + +P + +++ LL A +H PK+ +E
Sbjct: 141 IYHVNKSIRQTTLVDLIKKGFQEYGTLIEENLPNNLVEKYRLLDRASAVRSMHFPKNHEE 200
Query: 444 ADLARKRLIFDEFFYLQLGRLYQM-LEGL--GTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
A++R++F+EFF L+QM L+GL + E GL Y +L
Sbjct: 201 NHQAKRRVVFEEFF------LFQMRLQGLKKAEKAETNGLEILYDVQKL----------- 243
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
K+ + LP+ LT++Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G
Sbjct: 244 -KEFTQKLPFELTNAQKRVTNEICRDLRSPQHMQRLLQGDVGSGKTVVAAIALYATVTAG 302
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
+Q A MVPTE+LA QH E L +L D ++ +ALLTGST K+ R + + L+ G+I
Sbjct: 303 FQGALMVPTEILAQQHMESLQQLF-----DPNEVTVALLTGSTKTKERRELLEKLERGEI 357
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+LI + VEF L L I DEQ RFGV QR K +
Sbjct: 358 NVVIGTHALIQDGVEFQNLGLVITDEQHRFGVNQRKVLREKGW----------------- 400
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLA+ YG+M ++ I +LP GRIPI+T
Sbjct: 401 ------RPDVLFMTATPIPRTLAITAYGEMDVSIIDELPAGRIPIET 441
>gi|293570719|ref|ZP_06681769.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E980]
gi|291609191|gb|EFF38463.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E980]
Length = 678
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 173/527 (32%), Positives = 253/527 (48%), Gaps = 95/527 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
LD I+ + G+ ++ L + G T+ LL ++P Y D+Q + ++ D + G
Sbjct: 4 LDDPITMLAGVGEKRAASLASLGIRTIEDLLTYYPFRYEDIQERNLNEIQDQEKVTLKGI 63
Query: 266 IISSRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
++S M + G S L+ + E +V N+ F
Sbjct: 64 VVSPPVMNRFGYKKSRLQFRMMQE---------HDVFNVS-------------------F 95
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ P+LK K + E + V GK A R + I + DD S P
Sbjct: 96 FNQPYLKE---KVILSEEIAVYGKWDAKRK----ALNGMKILGSQTMDDFS--------P 140
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
IY + + L D I + Q + +P + +++ LL A +H PK+ +E
Sbjct: 141 IYHVNKSIRQTTLVDLIKKGFQEYGTLIEENLPNNLVEKYRLLDRASAVRSMHFPKNHEE 200
Query: 444 ADLARKRLIFDEFFYLQLGRLYQM-LEGL--GTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
A++R++F+EFF L+QM L+GL + E GL Y +L
Sbjct: 201 NHQAKRRVVFEEFF------LFQMRLQGLKKAEKAETNGLEILYDVQKL----------- 243
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
K+ + LP+ LT++Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G
Sbjct: 244 -KEFTQKLPFELTNAQKRVTNEICRDLRSPQHMQRLLQGDVGSGKTVVAAIALYATVTAG 302
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
+Q A MVPTE+LA QH E L +L D ++ +ALLTGST K+ R + + L+ G+I
Sbjct: 303 FQGALMVPTEILAQQHMESLQQLF-----DPNEVTVALLTGSTKTKERRELLEKLERGEI 357
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+LI + VEF L L I DEQ RFGV QR K +
Sbjct: 358 NVVIGTHALIQDGVEFQNLGLVITDEQHRFGVNQRKVLREKGW----------------- 400
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLA+ YG+M ++ I +LP GRIPI+T
Sbjct: 401 ------RPDVLFMTATPIPRTLAITAYGEMDVSIIDELPAGRIPIET 441
>gi|430842456|ref|ZP_19460371.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1007]
gi|430493537|gb|ELA69840.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1007]
Length = 678
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 173/527 (32%), Positives = 253/527 (48%), Gaps = 95/527 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
LD I+ + G+ ++ L + G T+ LL ++P Y D+Q + ++ D + G
Sbjct: 4 LDDPITMLAGVGEKRAASLASLGIRTIEDLLAYYPFRYEDIQERNLNEIQDQEKVTLKGI 63
Query: 266 IISSRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
++S M + G S L+ + E +V N+ F
Sbjct: 64 VVSPPVMNRFGYKKSRLQFRMMQE---------HDVFNVS-------------------F 95
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ P+LK K + E + V GK A R + I + DD S P
Sbjct: 96 FNQPYLKE---KVILSEEIAVYGKWDAKRK----ALNGMKILGSQTMDDFS--------P 140
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
IY + + L D I + Q + +P + +++ LL A +H PK+ +E
Sbjct: 141 IYHVNKSIRQTTLVDLIKKGFQEYGTLIEENLPNNLVEKYRLLDRASAVRSMHFPKNHEE 200
Query: 444 ADLARKRLIFDEFFYLQLGRLYQM-LEGL--GTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
A++R++F+EFF L+QM L+GL + E GL Y +L
Sbjct: 201 NHQAKRRVVFEEFF------LFQMRLQGLKKAEKAETNGLEILYDVQKL----------- 243
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
K+ + LP+ LT++Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G
Sbjct: 244 -KEFTQKLPFELTNAQKRVTNEICRDLRSPQHMQRLLQGDVGSGKTVVAAIALYATVTAG 302
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
+Q A MVPTE+LA QH E L +L D ++ +ALLTGST K+ R + + L+ G+I
Sbjct: 303 FQGALMVPTEILAQQHMESLQQLF-----DPNEVTVALLTGSTKTKERRELLEKLERGEI 357
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+LI + VEF L L I DEQ RFGV QR K +
Sbjct: 358 NVVIGTHALIQDGVEFQNLGLVITDEQHRFGVNQRKVLREKGW----------------- 400
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLA+ YG+M ++ I +LP GRIPI+T
Sbjct: 401 ------RPDVLFMTATPIPRTLAITAYGEMDVSIIDELPAGRIPIET 441
>gi|430823313|ref|ZP_19441885.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E0120]
gi|430866346|ref|ZP_19481623.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1574]
gi|430442411|gb|ELA52456.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E0120]
gi|430551574|gb|ELA91325.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1574]
Length = 678
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 174/527 (33%), Positives = 252/527 (47%), Gaps = 95/527 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
LD I+ + G+ ++ L + G T+ LL ++P Y D+Q + ++ D + G
Sbjct: 4 LDDPITMLAGVGEKRAASLASLGIQTIEDLLTYYPFRYEDIQERNLNEIQDQEKVTLKGI 63
Query: 266 IISSRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
++S M + G S L+ + E +V N+ F
Sbjct: 64 VVSPPVMNRFGYKKSRLQFRMMQE---------HDVFNVS-------------------F 95
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ P+LK K + E + V GK A R + I + DD S P
Sbjct: 96 FNQPYLKE---KVILSEEIAVYGKWDAKRK----ALNGMKILGSQTMDDFS--------P 140
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
IY + + L D I + Q + +P + +++ LL A +H PK +E
Sbjct: 141 IYHVNKSIRQTTLVDLIKKGFQEYGTLIEENLPNNLVEKYRLLDRASAVRSMHFPKDHEE 200
Query: 444 ADLARKRLIFDEFFYLQLGRLYQM-LEGL--GTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
A++R++F+EFF L+QM L+GL + E GL Y +L
Sbjct: 201 NHQAKRRVVFEEFF------LFQMRLQGLKKAEKAETNGLEILYDVQKL----------- 243
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
K+ + LP+ LT++Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G
Sbjct: 244 -KEFTQKLPFELTNAQKRVTNEICRDLRSPQHMQRLLQGDVGSGKTVVAAIALYATVTAG 302
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
+Q A MVPTE+LA QH E L +L D ++ IALLTGST K+ R + + L+ G+I
Sbjct: 303 FQGALMVPTEILAQQHMESLQQLF-----DPNEVTIALLTGSTKAKERRELLEKLEQGEI 357
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+LI + VEF L L I DEQ RFGV QR K +
Sbjct: 358 NVVIGTHALIQDGVEFQNLGLVITDEQHRFGVNQRKVLREKGW----------------- 400
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLA+ YG+M ++ I +LP GRIPI+T
Sbjct: 401 ------RPDVLFMTATPIPRTLAITAYGEMDISIIDELPAGRIPIET 441
>gi|374602042|ref|ZP_09675037.1| ATP-dependent DNA helicase RecG [Paenibacillus dendritiformis C454]
gi|374392232|gb|EHQ63559.1| ATP-dependent DNA helicase RecG [Paenibacillus dendritiformis C454]
Length = 672
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 164/522 (31%), Positives = 252/522 (48%), Gaps = 88/522 (16%)
Query: 214 VPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIISSRGM 272
V G+S +L G +T+ LL +FP Y D ++ ++ DG G I+S +
Sbjct: 2 VKGVSALKQTELHAFGIFTVADLLDYFPFRYEDFHLRRLSEVKDGDKVTVEGRIMSQPVL 61
Query: 273 KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKS 332
+ S L C + E +L +F + P+L+
Sbjct: 62 QRYGRKSRLT----CRVLVEE------------------WLITATWF------NRPYLRE 93
Query: 333 IEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDE-DDLSLRAKGRPYPIYPSKGG 391
+ + G + ++GK ++ R + V E D G P+Y G
Sbjct: 94 ---QLEQGRDIVLTGK---------WDQRRMQLTVSTSEFPDKGTSRIGTLQPVYSVGGK 141
Query: 392 LNASLLRDTIARALQAL-PANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKR 450
+ + +R TIA+ALQ A +P+P E+ + + L+ A +H P+ ++E AR+R
Sbjct: 142 ITQAWMRKTIAQALQQFGEAMTEPLPPEMLRRYRLIPRKQAVRAMHLPQDVEEGKQARRR 201
Query: 451 LIFDEFFYLQLG-RLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALP 509
L+++E QL ++ L T+ +G+ A+M ++ ++ R+LP
Sbjct: 202 LVYEELLLFQLKLHAFRAL----TRERSDGV-----------AFMVD-NATVRQFTRSLP 245
Query: 510 YSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPT 569
+ LT Q AI++I+ D++QP MNRLLQGDVG GKTVVA A + +GYQ A MVPT
Sbjct: 246 FELTDGQKQAITDILHDMRQPSCMNRLLQGDVGSGKTVVAATALYAAVRAGYQGALMVPT 305
Query: 570 ELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSL 629
E+LA QH L KL + H ++ LLTGS ++ R + LQ G I +++GTH+L
Sbjct: 306 EILAEQHMRSLSKLF-----EPHGIEVGLLTGSLTERKRRDVLAALQMGMIDILVGTHAL 360
Query: 630 IAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPH 689
I E V++ L L I DEQ RFGV QR K + P
Sbjct: 361 IQEDVQYRKLGLVITDEQHRFGVNQRSILRRKGW-----------------------NPD 397
Query: 690 VLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
VL M+ATPIPRTLA+ ++GD+ ++ I + P GR PIKTY ++
Sbjct: 398 VLTMTATPIPRTLAITVFGDLDVSSIRERPAGRKPIKTYWVK 439
>gi|431744008|ref|ZP_19532881.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E2071]
gi|430606071|gb|ELB43443.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E2071]
Length = 678
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 174/527 (33%), Positives = 252/527 (47%), Gaps = 95/527 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
LD I+ + G+ ++ L + G T+ LL ++P Y D+Q + ++ D + G
Sbjct: 4 LDDPITMLAGVGEKRAASLASLGIQTIEDLLTYYPFRYEDIQERNLNEIQDQEKVTLKGI 63
Query: 266 IISSRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
++S M + G S L+ + E +V N+ F
Sbjct: 64 VVSPPVMNRFGYKKSRLQFRMMQE---------HDVFNVS-------------------F 95
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ P+LK K + E + V GK A R + I + DD S P
Sbjct: 96 FNQPYLKE---KVILSEEIAVYGKWDAKRK----ALNGMKILGSQTMDDFS--------P 140
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
IY + + L D I + Q + +P + +++ LL A +H PK +E
Sbjct: 141 IYHVNKSIRQTTLVDLIKKGFQEYGTLIEENLPNNLVEKYRLLDRASAVRSMHFPKDHEE 200
Query: 444 ADLARKRLIFDEFFYLQLGRLYQM-LEGL--GTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
A++R++F+EFF L+QM L+GL + E GL Y +L
Sbjct: 201 NHQAKRRVVFEEFF------LFQMRLQGLKKAEKAETNGLEILYDVQKL----------- 243
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
K+ + LP+ LT++Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G
Sbjct: 244 -KEFTQKLPFELTNAQKRVTNEICRDLRSPQHMQRLLQGDVGSGKTVVAAIALYATVTAG 302
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
+Q A MVPTE+LA QH E L +L D ++ IALLTGST K+ R + + L+ G+I
Sbjct: 303 FQGALMVPTEILAQQHMESLQQLF-----DPNEVTIALLTGSTKAKERRELLEKLEQGEI 357
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+LI + VEF L L I DEQ RFGV QR K +
Sbjct: 358 NVVIGTHALIQDGVEFQNLGLVITDEQHRFGVNQRKVLREKGW----------------- 400
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLA+ YG+M ++ I +LP GRIPI+T
Sbjct: 401 ------RPDVLFMTATPIPRTLAITAYGEMDISIIDELPAGRIPIET 441
>gi|339639957|ref|ZP_08661401.1| ATP-dependent DNA helicase RecG [Streptococcus sp. oral taxon 056
str. F0418]
gi|339453226|gb|EGP65841.1| ATP-dependent DNA helicase RecG [Streptococcus sp. oral taxon 056
str. F0418]
Length = 671
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 170/527 (32%), Positives = 252/527 (47%), Gaps = 97/527 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + +S +PG+ + + G TL+ LL +FP Y D Q+ Q+ DL+DG+ + G
Sbjct: 3 LHQSLSVLPGVGPKSAEKFAKLGIETLQDLLLYFPFRYEDFQSKQVFDLEDGEKAVISGI 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+ + ++ + F ++ ++ +K+
Sbjct: 63 VATPANVQ---YYGF--------------------------KRNRLRFSIKQGEVVLAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K +VG V + GK +A S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIEVGATVAIFGKWDKAKASLTGMKL------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P + + + LL +A +H PK
Sbjct: 138 -PVYRVAQGISQTSLVKLIKTAFDQGLDLLIEENLPGVLLERYQLLSRVEAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ +E T N ++ +L
Sbjct: 197 LSEYRQALRRIKFEELFYFQMQLQVLKMESKDTS---------------NGLSIDWQKAL 241
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
++ + LP+SLT +Q ++SEI+ DLK P MNRLLQGDVG GKTVVA LA V +G
Sbjct: 242 LQEKKKQLPFSLTEAQERSLSEILSDLKSPAHMNRLLQGDVGSGKTVVAGLAMYAVYTAG 301
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQ+A MVPTE+LA QH+E L +L + K+ALLTGS V + R I ++TG +
Sbjct: 302 YQSALMVPTEILAEQHFESLGQLFPEL-------KLALLTGSMKVAERREILLAIETGTV 354
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+LI + V + L L IVDEQ RFGV QR K D
Sbjct: 355 DMVIGTHALIQDSVRYHRLGLVIVDEQHRFGVAQRRILREK--------------GDN-- 398
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T
Sbjct: 399 -------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIIT 438
>gi|257885669|ref|ZP_05665322.1| ATP-dependent DNA helicase RecG [Enterococcus faecium 1,231,501]
gi|294618523|ref|ZP_06698085.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1679]
gi|424791412|ref|ZP_18217844.1| ATP-dependent DNA helicase RecG [Enterococcus faecium V689]
gi|424869426|ref|ZP_18293130.1| ATP-dependent DNA helicase RecG [Enterococcus faecium R497]
gi|424965587|ref|ZP_18379538.1| ATP-dependent DNA helicase RecG [Enterococcus faecium P1190]
gi|424970480|ref|ZP_18383989.1| ATP-dependent DNA helicase RecG [Enterococcus faecium P1139]
gi|424976661|ref|ZP_18389734.1| ATP-dependent DNA helicase RecG [Enterococcus faecium P1123]
gi|425037931|ref|ZP_18442568.1| ATP-dependent DNA helicase RecG [Enterococcus faecium 513]
gi|425060593|ref|ZP_18463884.1| ATP-dependent DNA helicase RecG [Enterococcus faecium 503]
gi|430836408|ref|ZP_19454389.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E0680]
gi|430853254|ref|ZP_19470984.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1258]
gi|431380474|ref|ZP_19510855.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1627]
gi|431506856|ref|ZP_19515682.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1634]
gi|431695902|ref|ZP_19524796.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1904]
gi|257821525|gb|EEV48655.1| ATP-dependent DNA helicase RecG [Enterococcus faecium 1,231,501]
gi|291595223|gb|EFF26554.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1679]
gi|402919427|gb|EJX40027.1| ATP-dependent DNA helicase RecG [Enterococcus faecium V689]
gi|402935598|gb|EJX54838.1| ATP-dependent DNA helicase RecG [Enterococcus faecium R497]
gi|402943282|gb|EJX61778.1| ATP-dependent DNA helicase RecG [Enterococcus faecium P1190]
gi|402961644|gb|EJX78656.1| ATP-dependent DNA helicase RecG [Enterococcus faecium P1139]
gi|402968959|gb|EJX85408.1| ATP-dependent DNA helicase RecG [Enterococcus faecium P1123]
gi|403020712|gb|EJY33220.1| ATP-dependent DNA helicase RecG [Enterococcus faecium 513]
gi|403042477|gb|EJY53427.1| ATP-dependent DNA helicase RecG [Enterococcus faecium 503]
gi|430488535|gb|ELA65206.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E0680]
gi|430541076|gb|ELA81253.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1258]
gi|430582342|gb|ELB20769.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1627]
gi|430587243|gb|ELB25476.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1634]
gi|430597855|gb|ELB35637.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1904]
Length = 678
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 174/527 (33%), Positives = 252/527 (47%), Gaps = 95/527 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
LD I+ + G+ ++ L + G T+ LL ++P Y D+Q + ++ D + G
Sbjct: 4 LDDPITMLAGVGEKRAASLASLGIQTIEDLLTYYPFRYEDIQERNLNEIQDQEKVTLKGI 63
Query: 266 IISSRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
++S M + G S L+ + E +V N+ F
Sbjct: 64 VVSPPVMNRFGYKKSRLQFRMMQE---------HDVFNVS-------------------F 95
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ P+LK K + E + V GK A R + I + DD S P
Sbjct: 96 FNQPYLKE---KVILSEEIAVYGKWDAKRK----ALNGMKILGSQTMDDFS--------P 140
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
IY + + L D I + Q + +P + +++ LL A +H PK +E
Sbjct: 141 IYHVNKSIRQTTLVDLIKKGFQEYGTLIEENLPNNLVEKYRLLDRASAVRSMHFPKDHEE 200
Query: 444 ADLARKRLIFDEFFYLQLGRLYQM-LEGL--GTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
A++R++F+EFF L+QM L+GL + E GL Y +L
Sbjct: 201 NHQAKRRVVFEEFF------LFQMRLQGLKKAEKAETNGLEILYDVQKL----------- 243
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
K+ + LP+ LT++Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G
Sbjct: 244 -KEFTQKLPFELTNAQKRVTNEICRDLRSPQHMQRLLQGDVGSGKTVVAAIALYATVTAG 302
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
+Q A MVPTE+LA QH E L +L D ++ IALLTGST K+ R + + L+ G+I
Sbjct: 303 FQGALMVPTEILAQQHMESLQQLF-----DPNEVTIALLTGSTKAKERRELLEKLEQGEI 357
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+LI + VEF L L I DEQ RFGV QR K +
Sbjct: 358 NIVIGTHALIQDGVEFQNLGLVITDEQHRFGVNQRKVLREKGW----------------- 400
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLA+ YG+M ++ I +LP GRIPI+T
Sbjct: 401 ------RPDVLFMTATPIPRTLAITAYGEMDVSIIDELPAGRIPIET 441
>gi|15639674|ref|NP_219124.1| ATP-dependent DNA helicase RecG [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189025912|ref|YP_001933684.1| ATP-dependent DNA helicase RecG [Treponema pallidum subsp. pallidum
SS14]
gi|378973195|ref|YP_005221801.1| DNA helicase RecG [Treponema pallidum subsp. pertenue str. SamoaD]
gi|378974262|ref|YP_005222870.1| DNA helicase RecG [Treponema pallidum subsp. pertenue str.
Gauthier]
gi|378975320|ref|YP_005223930.1| DNA helicase RecG [Treponema pallidum subsp. pallidum DAL-1]
gi|378982171|ref|YP_005230478.1| DNA helicase RecG [Treponema pallidum subsp. pertenue str. CDC2]
gi|384422187|ref|YP_005631546.1| ATP-dependent DNA helicase RecG [Treponema pallidum subsp. pallidum
str. Chicago]
gi|408502547|ref|YP_006869991.1| DNA helicase RecG [Treponema pallidum subsp. pallidum str. Mexico
A]
gi|3914635|sp|P96130.1|RECG_TREPA RecName: Full=ATP-dependent DNA helicase RecG
gi|1732243|gb|AAB38707.1| RecG [Treponema pallidum]
gi|3322991|gb|AAC65656.1| DNA recombinase (recG) [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189018487|gb|ACD71105.1| DNA recombinase [Treponema pallidum subsp. pallidum SS14]
gi|291060053|gb|ADD72788.1| ATP-dependent DNA helicase RecG [Treponema pallidum subsp. pallidum
str. Chicago]
gi|374677520|gb|AEZ57813.1| DNA helicase RecG [Treponema pallidum subsp. pertenue str. SamoaD]
gi|374678590|gb|AEZ58882.1| DNA helicase RecG [Treponema pallidum subsp. pertenue str. CDC2]
gi|374679659|gb|AEZ59950.1| DNA helicase RecG [Treponema pallidum subsp. pertenue str.
Gauthier]
gi|374680720|gb|AEZ61010.1| DNA helicase RecG [Treponema pallidum subsp. pallidum DAL-1]
gi|408475910|gb|AFU66675.1| DNA helicase RecG [Treponema pallidum subsp. pallidum str. Mexico
A]
Length = 686
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 137/360 (38%), Positives = 198/360 (55%), Gaps = 27/360 (7%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHID 442
P+YP GL LR I A+ D +PK I +++ LL D + +H P+ +D
Sbjct: 145 PVYPLTKGLKQMKLRMLICAAMDQWIGTVDSELPKPILEKYHLLTKRDVLLSMHTPRTLD 204
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
+ + LIF+EFF LQ+ + L+ G +G D+ + + S L K
Sbjct: 205 DVAKGKHSLIFEEFFSLQMTIGMRSLQKRGRLPLTQGESDQQSAI---PSVVSELSLLQK 261
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
KL R LP+ LT Q I+EI DL++ PM RL+QGDVG GKT+VAF +C+++I G Q
Sbjct: 262 KLHRCLPFELTVDQKRVITEITQDLEREEPMARLIQGDVGSGKTLVAFFSCLKIIEQGGQ 321
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
A + PTELLA QH + +LL + ++A LTG+ + + + L G+I L
Sbjct: 322 VALLAPTELLARQHADTAARLLAPI-----GIRLAFLTGNVKSEGRAYLLEALVAGEINL 376
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
V+GTH+L ++ V + LRL I+DEQ RFGV+QR S + +G+P
Sbjct: 377 VVGTHALFSKSVRYHDLRLVIIDEQHRFGVLQR-------------SALIQKGREGNP-- 421
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN--EKGYENV 740
Q PH++ MSATPIPRTLAL+++GD+ ++ I +P GR P+ TYI EK YE V
Sbjct: 422 -QGKTPHIIMMSATPIPRTLALSVFGDLDISIIKSMPGGRKPVITYIARKTKAEKVYEFV 480
>gi|295109962|emb|CBL23915.1| ATP-dependent DNA helicase RecG [Ruminococcus obeum A2-162]
Length = 681
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 170/525 (32%), Positives = 257/525 (48%), Gaps = 77/525 (14%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
+ + + + G+ ++ G Y LLH++PR Y D A +D+ D + E
Sbjct: 1 MKQSLQTLKGVGEKTEKLFFRLGIYDTEDLLHYYPRNY-DAFEAPVDIAD------LEEG 53
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
A CS ++ G +I T D+ SG+ I+ ++
Sbjct: 54 TVKAVSAAVCSGVYVRSAGGKQI--ITATVADQ-----SGKLSVIWFNM----------- 95
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
P+L++I K G + G+V ++ E E +E SL+ PIY
Sbjct: 96 -PYLRTILKK---GSTFVLRGRVIKKQNRIQMEHPEVFTPAAYEEILHSLQ------PIY 145
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL 446
GL+ + TI + L+ LP + + ++I Q + L + A IH P ++E +
Sbjct: 146 GLTSGLSNKTITKTIRQLLENLPMYSEFLSEDIRQRYQLADINYALRTIHFPLSMEELLV 205
Query: 447 ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLR 506
+RKRL+FDEF L QM++ EK Y + W +T++++
Sbjct: 206 SRKRLVFDEFLLFILS--IQMMK------EKNEETPNY------FPIQKTW--VTEQIIE 249
Query: 507 ALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFM 566
LPYSLT++QL+ EI D+ M+RL+QGDVG GKT++AFLA + +GYQ+A M
Sbjct: 250 NLPYSLTNAQLNTWHEIERDMSGQALMSRLVQGDVGSGKTIIAFLAMILSCENGYQSALM 309
Query: 567 VPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGT 626
VPTE+LA QHY+ ++LL D LLTGS K+ R I + +G+ ++IGT
Sbjct: 310 VPTEVLAKQHYKSFMELLAQQGLDFCT---VLLTGSNTAKEKREIYAKIASGEAQIIIGT 366
Query: 627 HSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHM 686
H+LI EKV + L L I DEQ RFGV QR + G+P
Sbjct: 367 HALIQEKVVYKNLSLVITDEQHRFGVKQRESLAER----------------GNP------ 404
Query: 687 APHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P+VL MSATPIPRTLA+ LYGD+ ++ I +LP R+PIK +++
Sbjct: 405 -PNVLVMSATPIPRTLAIILYGDLDISVIDELPARRLPIKNCVVD 448
>gi|296270745|ref|YP_003653377.1| ATP-dependent DNA helicase RecG [Thermobispora bispora DSM 43833]
gi|296093532|gb|ADG89484.1| ATP-dependent DNA helicase RecG [Thermobispora bispora DSM 43833]
Length = 725
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 170/527 (32%), Positives = 248/527 (47%), Gaps = 80/527 (15%)
Query: 220 RLYHQLENC-GFYTLRKLLHHFPRTYADLQNAQI----DLDDGQYFIFIGEIIS--SRGM 272
R LE+ G T+ +LL H+PR YA Q ++ L G++ +G + S R M
Sbjct: 17 RTAASLESALGIRTVGELLRHYPRRYA--QRGELTPIASLRHGEHVTVVGRVSSVMRRPM 74
Query: 273 KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKS 332
K ++L+V+V T G + LHL F +G +
Sbjct: 75 K-NRRGTWLDVVV---------TDGTD------------KLHLAFFGKGG--------HA 104
Query: 333 IEGKHKVGEFVCVSGKVRAMRS--NNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKG 390
E + G +GKV + + ++ + + + P PIYPS
Sbjct: 105 AEQRLTPGTEAMFAGKVDVFTTPRTRRVTLTHPEYELFDESGETAEEFAAAPVPIYPSAQ 164
Query: 391 GLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKR 450
GL + +R + L L + DP+P E+ GL+ L +A IH+P + AR+R
Sbjct: 165 GLASWKIRRAVRTVLDVLSVD-DPLPAEVRGRQGLVTLEEALRRIHRPASQADIAPARRR 223
Query: 451 LIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPY 510
L FDE F LQL L + + T E K R PR L + + LP+
Sbjct: 224 LAFDEAFLLQLALLKRRM----TASEWAA---KPRPPRDG--------GLLSEFDKRLPF 268
Query: 511 SLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTE 570
LT Q EI DL +P PM+RLLQG+VG GKTVVA A ++V+ +G QAA + PTE
Sbjct: 269 ELTEGQRKVGEEIAADLARPHPMHRLLQGEVGAGKTVVALRAMLQVVDAGGQAALLAPTE 328
Query: 571 LLATQHYEHLLKLLDNMEEDK--HKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHS 628
+LA QH+ + LL ++ + LLTGS R +G +VIGTH+
Sbjct: 329 VLAQQHHRSITNLLGDLATGGVFGGTSVVLLTGSMGAAARRNALLAAASGQAGIVIGTHA 388
Query: 629 LIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAP 688
L+ E+V+F+ L L +VDEQ RFGV QR + M +G P
Sbjct: 389 LLQEQVQFADLGLVVVDEQHRFGVEQR-------------DALRMKAREGR--------P 427
Query: 689 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
HVL M+ATPIPRT+A+ ++GD+ ++ + LP GR PI T+++ EK
Sbjct: 428 HVLVMTATPIPRTVAMTVFGDLEVSTLAQLPSGRAPIATHVVPAAEK 474
>gi|78043676|ref|YP_360300.1| ATP-dependent DNA helicase RecG [Carboxydothermus hydrogenoformans
Z-2901]
gi|77995791|gb|ABB14690.1| ATP-dependent DNA helicase RecG [Carboxydothermus hydrogenoformans
Z-2901]
Length = 677
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 171/540 (31%), Positives = 259/540 (47%), Gaps = 98/540 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
+D + + G+ + L+ T++ L+++FP+ Y D + + I E+
Sbjct: 1 MDIPVQYLKGVGPQKAKLLQKLKIETVKDLIYYFPKRYEDRSSLKK----------ISEL 50
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEV----VNIDSGQKKKIYLHLKKFFRGT 322
I+ + ++G + E D++ V I+ G GT
Sbjct: 51 INDE----------VTTVLGTVVEVKEVIPRDKLKILKVGINDGS-------------GT 87
Query: 323 R---FTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAK 379
F + +LK++ K G+ V GKV + + EY D L
Sbjct: 88 AYGCFFNQSYLKNVFIK---GKKVYFYGKVEKRFFETNIYVYEYEFW------DKELLHT 138
Query: 380 GRPYPIYPSKGGLNASLLRDTIARAL-QALPANFDPVPKEITQEFGLLCLFDAYMGIHQP 438
R PIYP L+ R I AL + L +P+P+EI +++ L L A M +H P
Sbjct: 139 NRLVPIYPLTENLSPKTFRQLIKNALDKYLEEITEPLPEEILRKYSLPDLKQALMNLHFP 198
Query: 439 KHIDEADLARKRLIFDEF--FYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG 496
+ ++++LAR+R++F+EF F+L +G LY+ + +KP + A G
Sbjct: 199 ESSEQSELARRRMVFEEFLLFFLAIG-LYKE--------------NYQKKPGIVIA---G 240
Query: 497 WSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEV 556
L KK + +LP+ LTS+Q EI DL PMNRL+QGDVG GKT++A LA ++
Sbjct: 241 SGELEKKFIDSLPFKLTSAQEKVWREIKEDLAAKKPMNRLVQGDVGSGKTILAALALVKA 300
Query: 557 IGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQ 616
+ +G+Q A M PTE+LA QHY +L +L + K+ LL+GS + + K ++
Sbjct: 301 VEAGFQGALMAPTEILAEQHYLNLSRLFAPL-----GIKVVLLSGSLSSGKKEAVYKAIK 355
Query: 617 TGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNS 676
G ++IGTH+LI E V F L LA++DEQ RFGV QR K Y +
Sbjct: 356 NGYADVIIGTHALIQEAVIFDNLGLAVIDEQHRFGVEQRSSLVEKGLYVNQ--------- 406
Query: 677 DGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKG 736
L MSATPIPRTLAL LYGD+ ++ + LP GR PIKTY + +KG
Sbjct: 407 --------------LVMSATPIPRTLALTLYGDLDVSIVDALPAGRKPIKTYWLSSQDKG 452
>gi|110596932|ref|ZP_01385222.1| ATP-dependent DNA helicase RecG [Chlorobium ferrooxidans DSM 13031]
gi|110341619|gb|EAT60079.1| ATP-dependent DNA helicase RecG [Chlorobium ferrooxidans DSM 13031]
Length = 706
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 165/535 (30%), Positives = 252/535 (47%), Gaps = 92/535 (17%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFIGEII 267
I + G+ + L+ G T+ LL++FPR Y D + DL DG+ +G ++
Sbjct: 6 SIIYLKGVGSKKASILKEIGISTVDDLLNYFPRRYLDRSAMKCIRDLADGETVTVVGTVL 65
Query: 268 SSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
++ + +V +G E T +FRG RF
Sbjct: 66 KTQLEGTHPGRARFKVWLGDATGQLELT----------------------WFRGVRF--- 100
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLK---------DEDDLSLRA 378
F +SI G+ + V GKV +M+ + D L + D L
Sbjct: 101 -FSRSIVS----GDALAVHGKVSYF--GRQAQMQHPDYDRLTASPHEPGEGEISDFDLYH 153
Query: 379 KGRPYPIYPS-----KGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAY 432
GR IYP+ + GL + LR +ARA + + + I ++ LL L +AY
Sbjct: 154 TGRIISIYPTTDAMKQAGLTSKQLRTLVARAFDEYRVRSEENLSQAILSDYHLLPLREAY 213
Query: 433 MGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAA 492
IH P + +LAR R+ + E FY+QL ++ + + + R + A
Sbjct: 214 HEIHFPSSHEALELARYRMKWSELFYVQL--MFALRQ------------SELRTSK-RAV 258
Query: 493 YMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLA 552
+T++L R LPY LT +Q A+ EI DLK PMNRLLQGDVG GKT+VA A
Sbjct: 259 IFTHSGVVTEQLYRTLPYELTDAQKQAVREIYRDLKTGSPMNRLLQGDVGSGKTIVAMFA 318
Query: 553 CMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIR 612
+G Q+AFM PTE+LA QHY + +L + ++ LLTG K+ + +
Sbjct: 319 MALAADNGLQSAFMAPTEILAVQHYLSMKRLFQPL-----GLRVGLLTGKQRKKERQALL 373
Query: 613 KDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMA 672
+ L +G++ + +GTH+LI +V ++ L L ++DEQ RFGV+QR K
Sbjct: 374 EALGSGELHIAVGTHALIEGEVSYAGLGLVVIDEQHRFGVLQRKALREK----------- 422
Query: 673 MVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
VN PHVL M+ATPIPRTL++ ++GD+ ++ I +P GR P++T
Sbjct: 423 AVN------------PHVLLMTATPIPRTLSMGVFGDLDVSVIRQMPAGRRPVRT 465
>gi|293556809|ref|ZP_06675370.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1039]
gi|425058194|ref|ZP_18461585.1| ATP-dependent DNA helicase RecG [Enterococcus faecium 504]
gi|430834840|ref|ZP_19452842.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E0679]
gi|430839330|ref|ZP_19457271.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E0688]
gi|430858975|ref|ZP_19476593.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1552]
gi|291600893|gb|EFF31184.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1039]
gi|403038988|gb|EJY50169.1| ATP-dependent DNA helicase RecG [Enterococcus faecium 504]
gi|430484909|gb|ELA61856.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E0679]
gi|430490788|gb|ELA67284.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E0688]
gi|430544494|gb|ELA84523.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1552]
Length = 678
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 174/527 (33%), Positives = 252/527 (47%), Gaps = 95/527 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
LD I+ + G+ ++ L + G T+ LL ++P Y D+Q + ++ D + G
Sbjct: 4 LDDPITMLAGVGEKRAASLASLGIQTIEDLLTYYPFRYEDIQERNLNEIQDQEKVTLKGI 63
Query: 266 IISSRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
++S M + G S L+ + E +V N+ F
Sbjct: 64 VVSPPVMNRFGYKKSRLQFRMMQE---------HDVFNVS-------------------F 95
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ P+LK K + E + V GK A R + I + DD S P
Sbjct: 96 FNQPYLKE---KVILSEEIAVYGKWDAKRK----ALNGMKILGSQTMDDFS--------P 140
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
IY + + L D I + Q + +P + +++ LL A +H PK +E
Sbjct: 141 IYHVNKSIRQTTLVDLIKKGFQEYGTLIEENLPNNLVEKYRLLDRASAVRSMHFPKDHEE 200
Query: 444 ADLARKRLIFDEFFYLQLGRLYQM-LEGL--GTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
A++R++F+EFF L+QM L+GL + E GL Y +L
Sbjct: 201 NHQAKRRVVFEEFF------LFQMRLQGLKKAEKAETNGLEILYDVQKL----------- 243
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
K+ + LP+ LT++Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G
Sbjct: 244 -KEFTQKLPFELTNAQKRVTNEICRDLRSPQHMQRLLQGDVGSGKTVVAAIALYATVTAG 302
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
+Q A MVPTE+LA QH E L +L D ++ IALLTGST K+ R + + L+ G+I
Sbjct: 303 FQGALMVPTEILAQQHMESLQQLF-----DPNEVTIALLTGSTKAKERRELLEKLEQGEI 357
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+LI + VEF L L I DEQ RFGV QR K +
Sbjct: 358 NVVIGTHALIQDGVEFQNLGLVITDEQHRFGVNQRKVLREKGW----------------- 400
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLA+ YG+M ++ I +LP GRIPI+T
Sbjct: 401 ------RPDVLFMTATPIPRTLAITAYGEMDVSIIDELPAGRIPIET 441
>gi|400927456|ref|YP_001089075.2| ATP-dependent DNA helicase RecG [Clostridium difficile 630]
gi|328887724|emb|CAJ69448.2| ATP-dependent DNA helicase RecG [Clostridium difficile 630]
Length = 686
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 171/548 (31%), Positives = 262/548 (47%), Gaps = 101/548 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFIG 264
L K + V G+ + +L G +TL+ LL++FPR + D N + L+DG+ + I
Sbjct: 4 LYKDVQYVKGIGPKKADKLNKLGIFTLKDLLYYFPRQFEDRNNLKKIAQLEDGEK-VTIK 62
Query: 265 EIISSRGM---KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRG 321
+ISS K G + + ++V DE +G K ++ + K + +
Sbjct: 63 AVISSINTFSPKEGMTLTKIDV-------------KDE-----TGSAKLVFFN-KSYIKN 103
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
T + G+ + V GKV+ + N+ E+ ++ L + S + R
Sbjct: 104 T--------------FRPGDSILVFGKVK--KKFNNLELTSCELEYLTN----SPKNTCR 143
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G+ + I L+ +P+ I +++ L + A IH P
Sbjct: 144 FMPVYQLTYGVTNKEIMSIIRTVLEDKELIIQEYMPQRIIEKYRLCSIDFAVRNIHSPSS 203
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGL----GTQFEKEGLLDKYRKPRLNAAYMEG 496
+ +A R++F+E LQLG L+ G G +FE
Sbjct: 204 KESLKIALYRIVFEELLILQLG-LFVFKSGRNKEDGIKFE-------------------- 242
Query: 497 WSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEV 556
S KK++ ALP+ LT +Q A+ EII D+ MNRL+QGDVG GKTVVA LA
Sbjct: 243 TSKDLKKIISALPFKLTKAQNRALDEIIQDMNLEKIMNRLVQGDVGSGKTVVALLALANC 302
Query: 557 IGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQ 616
+ +GYQ A M PTE+LA QHY L + L + + LL GS KQ + + ++
Sbjct: 303 VLNGYQGALMAPTEILAGQHYISLTESLKDF-----GINVGLLIGSLTKKQKDTVLEQIK 357
Query: 617 TGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNS 676
+I ++IGTH+LI +KVEF+ + L I DEQ RFGV+QR + + K
Sbjct: 358 NNEIDILIGTHALIEDKVEFNNIGLVITDEQHRFGVMQRSKLSLK--------------- 402
Query: 677 DGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN--E 734
P +L M+ATPIPRTLAL LYGD+ ++ I +LPPGR PI+T IE + +
Sbjct: 403 --------GANPDILVMTATPIPRTLALILYGDLDISIIDELPPGRQPIETIAIEKSKRD 454
Query: 735 KGYENVYK 742
+ Y N+ +
Sbjct: 455 RAYNNLVR 462
>gi|260684132|ref|YP_003215417.1| ATP-dependent DNA helicase RecG [Clostridium difficile CD196]
gi|260687791|ref|YP_003218925.1| ATP-dependent DNA helicase RecG [Clostridium difficile R20291]
gi|260210295|emb|CBA64595.1| ATP-dependent DNA helicase [Clostridium difficile CD196]
gi|260213808|emb|CBE05774.1| ATP-dependent DNA helicase [Clostridium difficile R20291]
Length = 689
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 173/551 (31%), Positives = 264/551 (47%), Gaps = 103/551 (18%)
Query: 206 LLD--KCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFI 261
LLD K + V G+ + +L G +TL+ LL++FPR + D N + L+DG+ +
Sbjct: 4 LLDLYKDVQYVKGIGPKKADKLNKLGIFTLKDLLYYFPRQFEDRNNLKKIAQLEDGEK-V 62
Query: 262 FIGEIISSRGM---KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKF 318
I +ISS K G + + ++V DE +G K ++ + K +
Sbjct: 63 TIKAVISSINTFSPKEGMTLTKIDV-------------KDE-----TGSAKLVFFN-KSY 103
Query: 319 FRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRA 378
+ T + G+ + V GKV+ + N+ E+ ++ L + S +
Sbjct: 104 IKNT--------------FRPGDSILVFGKVK--KKFNNLELTSCELEYLTN----SPKN 143
Query: 379 KGRPYPIYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQ 437
R P+Y G+ + I L+ +P+ I +++ L + A IH
Sbjct: 144 TCRFMPVYQLTYGVTNKEIMSIIRTVLEDKELIIQEYMPQRIIEKYRLCSIDFAVRNIHS 203
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGL----GTQFEKEGLLDKYRKPRLNAAY 493
P + +A R++F+E LQLG L+ G G +FE
Sbjct: 204 PSSKESLKIALYRIVFEELLILQLG-LFVFKSGRNKEDGIKFE----------------- 245
Query: 494 MEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLAC 553
S KK++ ALP+ LT +Q A+ EII D+ MNRL+QGDVG GKTVVA LA
Sbjct: 246 ---TSKDLKKIISALPFKLTKAQNRALDEIIQDMNLEKIMNRLVQGDVGSGKTVVALLAL 302
Query: 554 MEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRK 613
+ +GYQ A M PTE+LA QHY L + L + + LL GS KQ + +
Sbjct: 303 ANCVLNGYQGALMAPTEILAGQHYISLTESLKDF-----GINVGLLIGSLTKKQKDTVLE 357
Query: 614 DLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAM 673
++ +I ++IGTH+LI +KVEF+ + L I DEQ RFGV+QR + + K
Sbjct: 358 QIRNNEIDILIGTHALIEDKVEFNNIGLVITDEQHRFGVMQRSKLSLK------------ 405
Query: 674 VNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN 733
P +L M+ATPIPRTLAL LYGD+ ++ I +LPPGR PI+T IE +
Sbjct: 406 -----------GANPDILVMTATPIPRTLALILYGDLDISIIDELPPGRQPIETIAIEKS 454
Query: 734 --EKGYENVYK 742
++ Y N+ +
Sbjct: 455 KRDRAYNNLVR 465
>gi|429765795|ref|ZP_19298075.1| ATP-dependent DNA helicase RecG [Clostridium celatum DSM 1785]
gi|429185648|gb|EKY26622.1| ATP-dependent DNA helicase RecG [Clostridium celatum DSM 1785]
Length = 676
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 172/529 (32%), Positives = 250/529 (47%), Gaps = 99/529 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN----AQIDLDDGQYFIF 262
+ K +S + G+ +L +L CG +T+ L+ +FPR Y L++ ++D ++ Q
Sbjct: 3 ISKDVSSLKGVGPKLLEKLNKCGIFTILDLMLYFPRDYEFLRSNIPFEEVDEEEKQV--- 59
Query: 263 IGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGT 322
+ C +G + D T +G KI ++ + G
Sbjct: 60 ---------LTCKC--------IGYD-KDVRTKNG------------KILTTIRFNYLGN 89
Query: 323 RFTSIPFLKS-IEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
F +S I+ K+GE + GK + + S + K+ + +
Sbjct: 90 LVLCKWFNQSFIKHSFKIGESYDLLGKFKRIGSRLEAVNPIIGVKAAKENEII------- 142
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
P Y KG L+ +L I + L+ + D +P+ + ++ ++ L +A IH PK
Sbjct: 143 --PKYSLKGELSDKILVKLIGKCLEEITIT-DNLPEYLIDKYKMINLDEAIRNIHFPKGK 199
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGL---GTQFEKEGLLDKYRKPRLNAAYMEGWS 498
E + A RL F E F + L + G +F+ L+D+
Sbjct: 200 KELEQAITRLKFQELFTYSMKLLILKRKLKSKNGIEFK---LVDEL-------------- 242
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
K L ALPYSLT +Q + EI+ D K P PMNRL+QGDVG GKTVVA +A V+
Sbjct: 243 ---KDLKAALPYSLTGAQTRVVREILRDQKSPWPMNRLVQGDVGSGKTVVALIAMFNVVK 299
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+GYQA MVPTE+LA QHY KLL + + LLTGST VK+ R I++ + T
Sbjct: 300 NGYQATLMVPTEILANQHYLEAKKLL-----EPFNIHVELLTGSTSVKEKRRIKELITTD 354
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+ +VIGTH+LI E V FS L L I DEQ RFGV QR R +K
Sbjct: 355 EPLIVIGTHALIQEDVAFSNLGLVITDEQHRFGVEQRSRLINK----------------- 397
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLAL +Y D+ ++ I +LPPGR P+ T
Sbjct: 398 ------GRRPDVLVMTATPIPRTLALYVYSDLDISAIDELPPGRKPVDT 440
>gi|423084313|ref|ZP_17072818.1| ATP-dependent DNA helicase RecG [Clostridium difficile
002-P50-2011]
gi|423088008|ref|ZP_17076393.1| ATP-dependent DNA helicase RecG [Clostridium difficile
050-P50-2011]
gi|357542618|gb|EHJ24660.1| ATP-dependent DNA helicase RecG [Clostridium difficile
002-P50-2011]
gi|357543536|gb|EHJ25553.1| ATP-dependent DNA helicase RecG [Clostridium difficile
050-P50-2011]
Length = 685
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 171/548 (31%), Positives = 262/548 (47%), Gaps = 101/548 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFIG 264
L K + V G+ + +L G +TL+ LL++FPR + D N + L+DG+ + I
Sbjct: 3 LYKDVQYVKGIGPKKADKLNKLGIFTLKDLLYYFPRQFEDRNNLKKIAQLEDGEK-VTIK 61
Query: 265 EIISSRGM---KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRG 321
+ISS K G + + ++V DE +G K ++ + K + +
Sbjct: 62 AVISSINTFSPKEGMTLTKIDV-------------KDE-----TGSAKLVFFN-KSYIKN 102
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
T + G+ + V GKV+ + N+ E+ ++ L + S + R
Sbjct: 103 T--------------FRPGDSILVFGKVK--KKFNNLELTSCELEYLTN----SPKNTCR 142
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G+ + I L+ +P+ I +++ L + A IH P
Sbjct: 143 FMPVYQLTYGVTNKEIMSIIRTVLEDKDLIIQEYMPQRIIEKYRLCSIDFAVRNIHSPSS 202
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGL----GTQFEKEGLLDKYRKPRLNAAYMEG 496
+ +A R++F+E LQLG L+ G G +FE
Sbjct: 203 KESLKIALYRIVFEELLILQLG-LFVFKSGRNKEDGIKFE-------------------- 241
Query: 497 WSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEV 556
S KK++ ALP+ LT +Q A+ EII D+ MNRL+QGDVG GKTVVA LA
Sbjct: 242 TSKDLKKIISALPFKLTKAQNRALDEIIQDMNLEKIMNRLVQGDVGSGKTVVALLALANC 301
Query: 557 IGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQ 616
+ +GYQ A M PTE+LA QHY L + L + + LL GS KQ + + ++
Sbjct: 302 VLNGYQGALMAPTEILAGQHYISLTESLKDF-----GINVGLLIGSLTKKQKDTVLEQIK 356
Query: 617 TGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNS 676
+I ++IGTH+LI +KVEF+ + L I DEQ RFGV+QR + + K
Sbjct: 357 NNEIDILIGTHALIEDKVEFNNIGLVITDEQHRFGVMQRSKLSLK--------------- 401
Query: 677 DGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN--E 734
P +L M+ATPIPRTLAL LYGD+ ++ I +LPPGR PI+T IE + +
Sbjct: 402 --------GANPDILVMTATPIPRTLALILYGDLDISIIDELPPGRQPIETIAIEKSKRD 453
Query: 735 KGYENVYK 742
+ Y N+ +
Sbjct: 454 RAYNNLVR 461
>gi|69249786|ref|ZP_00605048.1| ATP-dependent DNA helicase RecG [Enterococcus faecium DO]
gi|257878761|ref|ZP_05658414.1| ATP-dependent DNA helicase RecG [Enterococcus faecium 1,230,933]
gi|257881402|ref|ZP_05661055.1| ATP-dependent DNA helicase RecG [Enterococcus faecium 1,231,502]
gi|257890619|ref|ZP_05670272.1| ATP-dependent DNA helicase RecG [Enterococcus faecium 1,231,410]
gi|293562982|ref|ZP_06677449.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1162]
gi|294622007|ref|ZP_06701151.1| ATP-dependent DNA helicase RecG [Enterococcus faecium U0317]
gi|314937645|ref|ZP_07844971.1| ATP-dependent DNA helicase RecG [Enterococcus faecium TX0133a04]
gi|314942856|ref|ZP_07849669.1| ATP-dependent DNA helicase RecG [Enterococcus faecium TX0133C]
gi|314948008|ref|ZP_07851412.1| ATP-dependent DNA helicase RecG [Enterococcus faecium TX0082]
gi|314950926|ref|ZP_07853995.1| ATP-dependent DNA helicase RecG [Enterococcus faecium TX0133A]
gi|314991426|ref|ZP_07856903.1| ATP-dependent DNA helicase RecG [Enterococcus faecium TX0133B]
gi|314995053|ref|ZP_07860173.1| ATP-dependent DNA helicase RecG [Enterococcus faecium TX0133a01]
gi|383327451|ref|YP_005353335.1| ATP-dependent DNA helicase RecG [Enterococcus faecium Aus0004]
gi|389867276|ref|YP_006374699.1| DNA helicase RecG [Enterococcus faecium DO]
gi|415888764|ref|ZP_11549215.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E4453]
gi|416141151|ref|ZP_11599342.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E4452]
gi|424797456|ref|ZP_18223040.1| ATP-dependent DNA helicase RecG [Enterococcus faecium S447]
gi|424828246|ref|ZP_18252982.1| ATP-dependent DNA helicase RecG [Enterococcus faecium R501]
gi|424854850|ref|ZP_18279193.1| ATP-dependent DNA helicase RecG [Enterococcus faecium R499]
gi|424950214|ref|ZP_18365385.1| ATP-dependent DNA helicase RecG [Enterococcus faecium R496]
gi|424954353|ref|ZP_18369255.1| ATP-dependent DNA helicase RecG [Enterococcus faecium R494]
gi|424958440|ref|ZP_18373086.1| ATP-dependent DNA helicase RecG [Enterococcus faecium R446]
gi|424959873|ref|ZP_18374430.1| ATP-dependent DNA helicase RecG [Enterococcus faecium P1986]
gi|424969505|ref|ZP_18383075.1| ATP-dependent DNA helicase RecG [Enterococcus faecium P1140]
gi|424974100|ref|ZP_18387352.1| ATP-dependent DNA helicase RecG [Enterococcus faecium P1137]
gi|424981071|ref|ZP_18393824.1| ATP-dependent DNA helicase RecG [Enterococcus faecium ERV99]
gi|424984585|ref|ZP_18397113.1| ATP-dependent DNA helicase RecG [Enterococcus faecium ERV69]
gi|424987445|ref|ZP_18399820.1| ATP-dependent DNA helicase RecG [Enterococcus faecium ERV38]
gi|424990897|ref|ZP_18403087.1| ATP-dependent DNA helicase RecG [Enterococcus faecium ERV26]
gi|424994554|ref|ZP_18406489.1| ATP-dependent DNA helicase RecG [Enterococcus faecium ERV168]
gi|424997383|ref|ZP_18409146.1| ATP-dependent DNA helicase RecG [Enterococcus faecium ERV165]
gi|425001402|ref|ZP_18412921.1| ATP-dependent DNA helicase RecG [Enterococcus faecium ERV161]
gi|425003998|ref|ZP_18415328.1| ATP-dependent DNA helicase RecG [Enterococcus faecium ERV102]
gi|425006899|ref|ZP_18418054.1| ATP-dependent DNA helicase RecG [Enterococcus faecium ERV1]
gi|425011046|ref|ZP_18421970.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E422]
gi|425014149|ref|ZP_18424844.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E417]
gi|425017875|ref|ZP_18428356.1| ATP-dependent DNA helicase RecG [Enterococcus faecium C621]
gi|425020884|ref|ZP_18431171.1| ATP-dependent DNA helicase RecG [Enterococcus faecium C497]
gi|425030501|ref|ZP_18435674.1| ATP-dependent DNA helicase RecG [Enterococcus faecium C1904]
gi|425032640|ref|ZP_18437666.1| ATP-dependent DNA helicase RecG [Enterococcus faecium 515]
gi|425035573|ref|ZP_18440408.1| ATP-dependent DNA helicase RecG [Enterococcus faecium 514]
gi|425041750|ref|ZP_18446133.1| ATP-dependent DNA helicase RecG [Enterococcus faecium 511]
gi|425045387|ref|ZP_18449493.1| ATP-dependent DNA helicase RecG [Enterococcus faecium 510]
gi|425048543|ref|ZP_18452443.1| ATP-dependent DNA helicase RecG [Enterococcus faecium 509]
gi|425051634|ref|ZP_18455291.1| ATP-dependent DNA helicase RecG [Enterococcus faecium 506]
gi|430831856|ref|ZP_19449904.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E0333]
gi|430848255|ref|ZP_19466081.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1133]
gi|430855714|ref|ZP_19473420.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1392]
gi|431545040|ref|ZP_19518681.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1731]
gi|431755903|ref|ZP_19544545.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E2883]
gi|431768038|ref|ZP_19556479.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1321]
gi|431769457|ref|ZP_19557867.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1644]
gi|431773316|ref|ZP_19561642.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E2369]
gi|431776413|ref|ZP_19564675.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E2560]
gi|431779666|ref|ZP_19567858.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E4389]
gi|431782531|ref|ZP_19570664.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E6012]
gi|431784352|ref|ZP_19572394.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E6045]
gi|68194075|gb|EAN08620.1| ATP-dependent DNA helicase RecG [Enterococcus faecium DO]
gi|257812989|gb|EEV41747.1| ATP-dependent DNA helicase RecG [Enterococcus faecium 1,230,933]
gi|257817060|gb|EEV44388.1| ATP-dependent DNA helicase RecG [Enterococcus faecium 1,231,502]
gi|257826979|gb|EEV53605.1| ATP-dependent DNA helicase RecG [Enterococcus faecium 1,231,410]
gi|291598434|gb|EFF29507.1| ATP-dependent DNA helicase RecG [Enterococcus faecium U0317]
gi|291605108|gb|EFF34575.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1162]
gi|313590779|gb|EFR69624.1| ATP-dependent DNA helicase RecG [Enterococcus faecium TX0133a01]
gi|313593906|gb|EFR72751.1| ATP-dependent DNA helicase RecG [Enterococcus faecium TX0133B]
gi|313596935|gb|EFR75780.1| ATP-dependent DNA helicase RecG [Enterococcus faecium TX0133A]
gi|313598328|gb|EFR77173.1| ATP-dependent DNA helicase RecG [Enterococcus faecium TX0133C]
gi|313643022|gb|EFS07602.1| ATP-dependent DNA helicase RecG [Enterococcus faecium TX0133a04]
gi|313645606|gb|EFS10186.1| ATP-dependent DNA helicase RecG [Enterococcus faecium TX0082]
gi|364090263|gb|EHM32872.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E4452]
gi|364094786|gb|EHM36908.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E4453]
gi|378937145|gb|AFC62217.1| ATP-dependent DNA helicase RecG [Enterococcus faecium Aus0004]
gi|388532525|gb|AFK57717.1| DNA helicase RecG [Enterococcus faecium DO]
gi|402921012|gb|EJX41482.1| ATP-dependent DNA helicase RecG [Enterococcus faecium S447]
gi|402922885|gb|EJX43229.1| ATP-dependent DNA helicase RecG [Enterococcus faecium R501]
gi|402932179|gb|EJX51711.1| ATP-dependent DNA helicase RecG [Enterococcus faecium R499]
gi|402933503|gb|EJX52929.1| ATP-dependent DNA helicase RecG [Enterococcus faecium R496]
gi|402936987|gb|EJX56131.1| ATP-dependent DNA helicase RecG [Enterococcus faecium R494]
gi|402940224|gb|EJX59078.1| ATP-dependent DNA helicase RecG [Enterococcus faecium R446]
gi|402948475|gb|EJX66612.1| ATP-dependent DNA helicase RecG [Enterococcus faecium P1140]
gi|402949357|gb|EJX67423.1| ATP-dependent DNA helicase RecG [Enterococcus faecium P1986]
gi|402957447|gb|EJX74838.1| ATP-dependent DNA helicase RecG [Enterococcus faecium P1137]
gi|402964685|gb|EJX81453.1| ATP-dependent DNA helicase RecG [Enterococcus faecium ERV99]
gi|402968532|gb|EJX85011.1| ATP-dependent DNA helicase RecG [Enterococcus faecium ERV69]
gi|402974437|gb|EJX90489.1| ATP-dependent DNA helicase RecG [Enterococcus faecium ERV38]
gi|402978479|gb|EJX94218.1| ATP-dependent DNA helicase RecG [Enterococcus faecium ERV26]
gi|402979981|gb|EJX95620.1| ATP-dependent DNA helicase RecG [Enterococcus faecium ERV168]
gi|402986497|gb|EJY01620.1| ATP-dependent DNA helicase RecG [Enterococcus faecium ERV165]
gi|402986854|gb|EJY01958.1| ATP-dependent DNA helicase RecG [Enterococcus faecium ERV161]
gi|402990651|gb|EJY05516.1| ATP-dependent DNA helicase RecG [Enterococcus faecium ERV102]
gi|402996103|gb|EJY10506.1| ATP-dependent DNA helicase RecG [Enterococcus faecium ERV1]
gi|402998253|gb|EJY12518.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E422]
gi|402999499|gb|EJY13686.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E417]
gi|403002734|gb|EJY16680.1| ATP-dependent DNA helicase RecG [Enterococcus faecium C1904]
gi|403003502|gb|EJY17399.1| ATP-dependent DNA helicase RecG [Enterococcus faecium C621]
gi|403008062|gb|EJY21591.1| ATP-dependent DNA helicase RecG [Enterococcus faecium C497]
gi|403012397|gb|EJY25624.1| ATP-dependent DNA helicase RecG [Enterococcus faecium 515]
gi|403017827|gb|EJY30551.1| ATP-dependent DNA helicase RecG [Enterococcus faecium 514]
gi|403025531|gb|EJY37609.1| ATP-dependent DNA helicase RecG [Enterococcus faecium 511]
gi|403027080|gb|EJY38992.1| ATP-dependent DNA helicase RecG [Enterococcus faecium 510]
gi|403030474|gb|EJY42157.1| ATP-dependent DNA helicase RecG [Enterococcus faecium 509]
gi|403037254|gb|EJY48554.1| ATP-dependent DNA helicase RecG [Enterococcus faecium 506]
gi|430480497|gb|ELA57671.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E0333]
gi|430535598|gb|ELA75998.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1133]
gi|430546256|gb|ELA86218.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1392]
gi|430592088|gb|ELB30110.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1731]
gi|430616018|gb|ELB52943.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E2883]
gi|430629767|gb|ELB66155.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1321]
gi|430636739|gb|ELB72799.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E2369]
gi|430637032|gb|ELB73076.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1644]
gi|430640964|gb|ELB76785.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E2560]
gi|430641428|gb|ELB77230.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E4389]
gi|430647168|gb|ELB82616.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E6012]
gi|430649926|gb|ELB85293.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E6045]
Length = 678
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 173/527 (32%), Positives = 252/527 (47%), Gaps = 95/527 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
LD I+ + G+ ++ L + G T+ LL ++P Y D+Q + ++ D + G
Sbjct: 4 LDDPITMLAGVGEKRAASLASLGIQTIEDLLTYYPFRYEDIQERNLNEIQDQEKVTLKGI 63
Query: 266 IISSRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
++S M + G S L+ + E +V N+ F
Sbjct: 64 VVSPPVMNRFGYKKSRLQFRMMQE---------HDVFNVS-------------------F 95
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ P+LK K + E + V GK A R + I + DD S P
Sbjct: 96 FNQPYLKE---KVILSEEIAVYGKWDAKRK----ALNGMKILGSQTMDDFS--------P 140
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
IY + + L D I + Q + +P + +++ LL A +H PK +E
Sbjct: 141 IYHVNKSIRQTTLVDLIKKGFQEYGTLIEENLPNNLVEKYRLLDRASAVRSMHFPKDHEE 200
Query: 444 ADLARKRLIFDEFFYLQLGRLYQM-LEGL--GTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
A++R++F+EFF L+QM L+GL + E GL Y +L
Sbjct: 201 NHQAKRRVVFEEFF------LFQMRLQGLKKAEKAETNGLEILYDVQKL----------- 243
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
K+ + LP+ LT++Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G
Sbjct: 244 -KQFTQKLPFELTNAQKRVTNEICRDLRSPQHMQRLLQGDVGSGKTVVAAIALYATVTAG 302
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
+Q A MVPTE+LA QH E L +L D ++ IAL+TGST K+ R + + L+ G+I
Sbjct: 303 FQGALMVPTEILAQQHMESLQQLF-----DPNEVTIALITGSTKAKERRELLEKLEQGEI 357
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+LI + VEF L L I DEQ RFGV QR K +
Sbjct: 358 NVVIGTHALIQDGVEFQNLGLVITDEQHRFGVNQRKVLREKGW----------------- 400
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLA+ YG+M ++ I +LP GRIPI+T
Sbjct: 401 ------RPDVLFMTATPIPRTLAITAYGEMDVSIIDELPAGRIPIET 441
>gi|404493231|ref|YP_006717337.1| ATP-dependent DNA helicase RecG [Pelobacter carbinolicus DSM 2380]
gi|77545291|gb|ABA88853.1| ATP-dependent DNA helicase RecG [Pelobacter carbinolicus DSM 2380]
Length = 717
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 178/570 (31%), Positives = 270/570 (47%), Gaps = 111/570 (19%)
Query: 202 SIEPLLDKC-------ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN----A 250
S++P +C + + G+ RL + G +T+ L+ P Y D + A
Sbjct: 2 SLKPTYKQCHEFLGTPLDTIRGVGPRLVEKFAKMGVFTVEHALYTLPFRYEDRRRLTPIA 61
Query: 251 QIDLDDGQYFIFIGEIIS-SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKK 309
Q+ D + IF+GE+++ S + EVIVG SG
Sbjct: 62 QLKPDCKE--IFVGEVLAASEKTTSRSRRKLFEVIVGD----------------SSGSIS 103
Query: 310 KIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVR---AMRSNNHYE---MRE- 362
+ H +K + I+ ++ +G G+V+ A+R +H + +RE
Sbjct: 104 LKWFHYRKTW-------------IQKQYPLGRRGIFYGEVKRFGAIREIHHPDVDFLREG 150
Query: 363 YNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANF--DPVPKEIT 420
+ L + D LS GR P+YP GL +R I + + A + P+P EI
Sbjct: 151 QDPQSLLESDPLSF---GRILPVYPLTEGLTQKTIR-KIWKQIVDRYAEYVVAPLPDEIR 206
Query: 421 QEFGLLCLFDAYMGIHQP------KHIDEA-DLARKRLIFDEFFYLQLGRLYQMLEGLGT 473
+ L+ L DA +H P K ++E AR+ L+FDE FYL+LG
Sbjct: 207 KRQNLMPLSDALRRVHFPSSDSSLKELEEGMSPARRTLVFDELFYLELG----------M 256
Query: 474 QFEKEG-LLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVP 532
++ G LL++ +L+ Y TK L LP+ LT +Q + EI D+ P P
Sbjct: 257 ALKRRGVLLEEGHAFKLDHIY-------TKPLAGMLPFRLTEAQRRVLGEIKRDMMSPHP 309
Query: 533 MNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKH 592
MNRLLQGDVG GKTVVA +A + I + Q A + PTE+LA QH+ + +
Sbjct: 310 MNRLLQGDVGSGKTVVALMAALVAIENRTQVAVVAPTEILAEQHFFQFQGWMKAL----- 364
Query: 593 KPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGV 652
+ LTGSTP Q R I + L+ + +V+GTH+++ + VEF+AL L I+DEQ RFGV
Sbjct: 365 GLGVVFLTGSTPTAQRREILQQLKNSTVDMVVGTHAVLQDDVEFAALGLGIIDEQHRFGV 424
Query: 653 VQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSL 712
+QR K +H P +L M+ATPIPRTLAL +YGD++L
Sbjct: 425 LQRACLRKK---------------------GKH--PDLLVMTATPIPRTLALTVYGDLAL 461
Query: 713 TQITDLPPGRIPIKTYII--EGNEKGYENV 740
+ I +PPGR P+ T +I + + Y+ +
Sbjct: 462 SVIDQMPPGRQPVNTKVIVDQQRRQAYQTI 491
>gi|15895013|ref|NP_348362.1| RecG helicase [Clostridium acetobutylicum ATCC 824]
gi|337736954|ref|YP_004636401.1| RecG helicase [Clostridium acetobutylicum DSM 1731]
gi|384458461|ref|YP_005670881.1| RecG helicase [Clostridium acetobutylicum EA 2018]
gi|15024704|gb|AAK79702.1|AE007683_1 RecG helicase [Clostridium acetobutylicum ATCC 824]
gi|325509150|gb|ADZ20786.1| RecG helicase [Clostridium acetobutylicum EA 2018]
gi|336292083|gb|AEI33217.1| RecG helicase [Clostridium acetobutylicum DSM 1731]
Length = 678
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 171/527 (32%), Positives = 254/527 (48%), Gaps = 85/527 (16%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQ--NAQIDLDDGQYFIFIGEIIS 268
I+ + G+ + +L CG +T+ LL +FPR Y +L + ++++DGQ I
Sbjct: 7 IATLKGVGPKTALKLNKCGIFTILDLLLYFPRDYENLSLMSNILEVEDGQKVI------- 59
Query: 269 SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIP 328
C+ LE + + S V I I+ K F G F P
Sbjct: 60 -----VKCTPLRLE-------KEFRSKSRKTVTKI-------IFSDGKTTFSGIWFNQ-P 99
Query: 329 FLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPS 388
++K+ K K E + GK++ R+ N M + + E+ S + + P Y
Sbjct: 100 YIKN---KFKYNETYTIMGKIK--RTKNEITMN----NPIPVENRSS--SDEKIVPKYAL 148
Query: 389 KGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLAR 448
G L + I LQ + + + +P+ I ++ L ++ IH P+++ E +
Sbjct: 149 SGTLKNTFFIRLIFELLQNIKID-ENMPEWIIKKNAFHSLDESLREIHSPRNMLELREST 207
Query: 449 KRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRAL 508
+RL F E F L L +L +Y K N + + KL +L
Sbjct: 208 RRLKFQELFTYSLKVL---------------MLKEYIKKN-NKGFAFKIAPELIKLKESL 251
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
P+ LT +Q I EI+ D K+P MNRL+QGDVG GKT+VA +A VI +G+QA M P
Sbjct: 252 PFKLTEAQNLVIREILKDEKRPQAMNRLVQGDVGSGKTIVALIAIFNVIKNGFQAVLMAP 311
Query: 569 TELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHS 628
TE+LA QH+E L + +I LLTGS K R+I++ L+ G+I L+IGTH+
Sbjct: 312 TEILAKQHFESANTLF-----KEFNIRIELLTGSVTDKNKRIIKEKLKDGEIDLIIGTHA 366
Query: 629 LIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAP 688
LI + VEFS L + + DE RFGV+QR R +K G+ D
Sbjct: 367 LIEDNVEFSNLGIVVTDELHRFGVMQRNRLFNK----------------GNNID------ 404
Query: 689 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
VL M+ATPIPRTLAL LYGD+ ++ I LPPGR +KT I+ N +
Sbjct: 405 -VLVMTATPIPRTLALYLYGDLDVSIIDTLPPGRKEVKTLCIKKNSR 450
>gi|257899371|ref|ZP_05679024.1| ATP-dependent DNA helicase RecG [Enterococcus faecium Com15]
gi|257837283|gb|EEV62357.1| ATP-dependent DNA helicase RecG [Enterococcus faecium Com15]
Length = 678
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 173/527 (32%), Positives = 253/527 (48%), Gaps = 95/527 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
LD I+ + G+ ++ L + G T+ LL ++P Y D+Q + ++ D + G
Sbjct: 4 LDDPITMLAGVGEKRAASLASLGIQTIEDLLTYYPFRYEDIQERNLNEIQDQEKVTLKGI 63
Query: 266 IISSRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
++S M + G S L+ + E +V N+ F
Sbjct: 64 VVSPPVMNRFGYKKSRLQFRMMQE---------HDVFNVS-------------------F 95
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ P+LK K + E + V GK A R + I + DD S P
Sbjct: 96 FNQPYLKE---KVILSEEIAVYGKWDAKRK----ALNGMKILGSQTMDDFS--------P 140
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
IY + + L D I + Q + +P + +++ LL A +H PK+ +E
Sbjct: 141 IYHVNKSIRQTTLVDLIKKGFQEYGTLIEENLPNNLVEKYRLLDRASAVRSMHFPKNHEE 200
Query: 444 ADLARKRLIFDEFFYLQLGRLYQM-LEGL--GTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
A++R++F+EFF L+QM L+GL + E GL Y +L
Sbjct: 201 NHQAKRRVVFEEFF------LFQMRLQGLKKAEKAETNGLEILYDVQKL----------- 243
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
K+ + LP+ LT++Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G
Sbjct: 244 -KEFTQKLPFELTNAQKRVTNEICRDLRSPQHMQRLLQGDVGSGKTVVAAIALYATVIAG 302
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
+Q A MVPTE+LA QH E L +L D ++ +ALLTGST K+ R + + L+ G+I
Sbjct: 303 FQGALMVPTEILAQQHMESLQQLF-----DPNEVTVALLTGSTKTKERRELLEKLERGEI 357
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+LI + VEF L L I DEQ RFGV QR K +
Sbjct: 358 NVVIGTHALIQDGVEFQNLGLVITDEQHRFGVNQRKVLREKGW----------------- 400
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLA+ YG+M ++ I +LP GRIPI+T
Sbjct: 401 ------RPDVLFMTATPIPRTLAITAYGEMDVSIIDELPAGRIPIET 441
>gi|254976149|ref|ZP_05272621.1| ATP-dependent DNA helicase RecG [Clostridium difficile QCD-66c26]
gi|255093539|ref|ZP_05323017.1| ATP-dependent DNA helicase RecG [Clostridium difficile CIP 107932]
gi|255315282|ref|ZP_05356865.1| ATP-dependent DNA helicase RecG [Clostridium difficile QCD-76w55]
gi|255517950|ref|ZP_05385626.1| ATP-dependent DNA helicase RecG [Clostridium difficile QCD-97b34]
gi|255651066|ref|ZP_05397968.1| ATP-dependent DNA helicase RecG [Clostridium difficile QCD-37x79]
gi|306520922|ref|ZP_07407269.1| ATP-dependent DNA helicase RecG [Clostridium difficile QCD-32g58]
gi|384361774|ref|YP_006199626.1| ATP-dependent DNA helicase RecG [Clostridium difficile BI1]
Length = 685
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 171/548 (31%), Positives = 262/548 (47%), Gaps = 101/548 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFIG 264
L K + V G+ + +L G +TL+ LL++FPR + D N + L+DG+ + I
Sbjct: 3 LYKDVQYVKGIGPKKADKLNKLGIFTLKDLLYYFPRQFEDRNNLKKIAQLEDGEK-VTIK 61
Query: 265 EIISSRGM---KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRG 321
+ISS K G + + ++V DE +G K ++ + K + +
Sbjct: 62 AVISSINTFSPKEGMTLTKIDV-------------KDE-----TGSAKLVFFN-KSYIKN 102
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
T + G+ + V GKV+ + N+ E+ ++ L + S + R
Sbjct: 103 T--------------FRPGDSILVFGKVK--KKFNNLELTSCELEYLTN----SPKNTCR 142
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G+ + I L+ +P+ I +++ L + A IH P
Sbjct: 143 FMPVYQLTYGVTNKEIMSIIRTVLEDKELIIQEYMPQRIIEKYRLCSIDFAVRNIHSPSS 202
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGL----GTQFEKEGLLDKYRKPRLNAAYMEG 496
+ +A R++F+E LQLG L+ G G +FE
Sbjct: 203 KESLKIALYRIVFEELLILQLG-LFVFKSGRNKEDGIKFE-------------------- 241
Query: 497 WSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEV 556
S KK++ ALP+ LT +Q A+ EII D+ MNRL+QGDVG GKTVVA LA
Sbjct: 242 TSKDLKKIISALPFKLTKAQNRALDEIIQDMNLEKIMNRLVQGDVGSGKTVVALLALANC 301
Query: 557 IGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQ 616
+ +GYQ A M PTE+LA QHY L + L + + LL GS KQ + + ++
Sbjct: 302 VLNGYQGALMAPTEILAGQHYISLTESLKDF-----GINVGLLIGSLTKKQKDTVLEQIR 356
Query: 617 TGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNS 676
+I ++IGTH+LI +KVEF+ + L I DEQ RFGV+QR + + K
Sbjct: 357 NNEIDILIGTHALIEDKVEFNNIGLVITDEQHRFGVMQRSKLSLK--------------- 401
Query: 677 DGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN--E 734
P +L M+ATPIPRTLAL LYGD+ ++ I +LPPGR PI+T IE + +
Sbjct: 402 --------GANPDILVMTATPIPRTLALILYGDLDISIIDELPPGRQPIETIAIEKSKRD 453
Query: 735 KGYENVYK 742
+ Y N+ +
Sbjct: 454 RAYNNLVR 461
>gi|291545912|emb|CBL19020.1| ATP-dependent DNA helicase RecG [Ruminococcus sp. SR1/5]
Length = 686
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 135/349 (38%), Positives = 192/349 (55%), Gaps = 45/349 (12%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
P+Y GL+ ++ + + L P + + +P+EI + + L A IH PK++ E
Sbjct: 145 PVYGLTKGLSNKMITKLVHQILDTRPLHGEYLPEEIRERYQLADANYAIRTIHFPKNMQE 204
Query: 444 ADLARKRLIFDEF--FYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
ARKRL+FDEF F L + L + E F + + W+ T
Sbjct: 205 LLTARKRLVFDEFLLFVLAIQLLKEKTEEAPNTFPMKPV----------------WT--T 246
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
++++ LPY LT +Q + EI DL M+RL+QGDVG GKTV+AFLA + +G+
Sbjct: 247 EEIIEGLPYDLTGAQKNVWHEIERDLSGHKLMSRLVQGDVGSGKTVIAFLAMVLSAENGF 306
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q+A MVPTE+LA QHYE L+L++ P LLTGST +Q R I + + G++
Sbjct: 307 QSALMVPTEVLANQHYEGFLRLMEEQNIASCHP--VLLTGSTTARQKREIYQKIADGEVN 364
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
++IGTH+LI EKVE+ L L I DEQ RFGV QR ++ G+P
Sbjct: 365 VIIGTHALIQEKVEYKNLGLVITDEQHRFGVRQREALTTR----------------GNP- 407
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
PHVL MSATPIPRTLA+ LYGD+ ++ I +LP R+PIK ++
Sbjct: 408 ------PHVLVMSATPIPRTLAIILYGDLDISIIDELPAKRLPIKNCVV 450
>gi|423092588|ref|ZP_17080392.1| ATP-dependent DNA helicase RecG [Clostridium difficile 70-100-2010]
gi|357553458|gb|EHJ35205.1| ATP-dependent DNA helicase RecG [Clostridium difficile 70-100-2010]
Length = 685
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 171/548 (31%), Positives = 262/548 (47%), Gaps = 101/548 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFIG 264
L K + V G+ + +L G +TL+ LL++FPR + D N + L+DG+ + I
Sbjct: 3 LYKDVQYVKGIGPKKADKLNKLGIFTLKDLLYYFPRQFEDRNNLKKIAQLEDGEK-VTIK 61
Query: 265 EIISSRGM---KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRG 321
+ISS K G + + ++V DE +G K ++ + K + +
Sbjct: 62 AVISSINTFSPKEGMTLTKIDV-------------KDE-----TGSAKLVFFN-KSYIKN 102
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
T + G+ + V GKV+ + N+ E+ ++ L + S + R
Sbjct: 103 T--------------FRPGDSILVFGKVK--KKFNNLELTSCELEYLTN----SPKNTCR 142
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G+ + I L+ +P+ I +++ L + A IH P
Sbjct: 143 FMPVYQLTYGVTNKEIMSIIRTVLEDKELIIQEYMPQRIIEKYRLCSIDFAVRNIHSPSS 202
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGL----GTQFEKEGLLDKYRKPRLNAAYMEG 496
+ +A R++F+E LQLG L+ G G +FE
Sbjct: 203 KESLKIALYRIVFEELLILQLG-LFVFKSGRNKEDGIKFE-------------------- 241
Query: 497 WSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEV 556
S KK++ ALP+ LT +Q A+ EII D+ MNRL+QGDVG GKTVVA LA
Sbjct: 242 TSKDLKKIISALPFKLTKAQNRALDEIIQDMNLEKIMNRLVQGDVGSGKTVVALLALANC 301
Query: 557 IGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQ 616
+ +GYQ A M PTE+LA QHY L + L + + LL GS KQ + + ++
Sbjct: 302 VLNGYQGALMAPTEILAGQHYISLTESLKDF-----GINVGLLIGSLTKKQKDTVLEQIK 356
Query: 617 TGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNS 676
+I ++IGTH+LI +KVEF+ + L I DEQ RFGV+QR + + K
Sbjct: 357 NNEIDILIGTHALIEDKVEFNNIGLVITDEQHRFGVMQRSKLSLK--------------- 401
Query: 677 DGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN--E 734
P +L M+ATPIPRTLAL LYGD+ ++ I +LPPGR PI+T IE + +
Sbjct: 402 --------GANPDILVMTATPIPRTLALILYGDLDISIIDELPPGRQPIETIAIEKSKRD 453
Query: 735 KGYENVYK 742
+ Y N+ +
Sbjct: 454 RAYNNLVR 461
>gi|412990669|emb|CCO18041.1| ATP-dependent DNA helicase RecG [Bathycoccus prasinos]
Length = 1412
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 180/541 (33%), Positives = 261/541 (48%), Gaps = 81/541 (14%)
Query: 217 LSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIIS------SR 270
L ++ LE G T+ +L PR Y + DL G +G ++ +R
Sbjct: 677 LDEKTLKALETEGVDTVEAILRVCPRKYQEYSPMSNDLRPGTSVSLLGRVVGVQVAPFTR 736
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRG--TRFTSIP 328
G + LE + E E + G+ K KI+ +L K + TR +I
Sbjct: 737 GRSRQPNVITLETVKTSET--NEASEGEGWGKSPQRFKVKIWEYLTKDVKSSLTR-DAIV 793
Query: 329 FLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLS-LRAKGRPYPIYP 387
++ G EF S K+ L D D++ + G Y
Sbjct: 794 KVRGTLGNFTGSEFSVESAKI------------------LTDAQDVTPIGEAGEVVATYA 835
Query: 388 SKGGLNASLLRDTIARALQALPANFDPVPKEIT--------QEFGLLCLFDAYMGIHQPK 439
K + I RAL+ P E++ +E L+ +A IH P
Sbjct: 836 KKASMTNEEWHKAIPRALEFFLKKLKGDPLEVSLGKENALLKELQLVSHAEAVASIHAPA 895
Query: 440 HIDEADLARKRLIFDEFFYLQLGRL--YQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGW 497
+++ AR+RL F+E LQ+ + + L+ L + E EG DK EG
Sbjct: 896 TVEQVARARERLAFEELLILQVQLMGERKRLQSLAAENEGEG--DK-----------EGI 942
Query: 498 S----SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLAC 553
S L +L + L +SLT SQ A+ EI+ D+ P PM RLLQGDVGCGKTVVA LA
Sbjct: 943 SIVSTHLCDQLRKELSFSLTRSQDQALEEILTDMAGPAPMLRLLQGDVGCGKTVVAALAL 1002
Query: 554 MEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRK 613
+ +G+G+Q A M PTE+LA QHY+ L LL M D PK ++TGST K+ ++I +
Sbjct: 1003 LAAVGAGHQGALMAPTEVLANQHYKTLSDLLREMGPD--APKCEIITGSTKQKELKLIYE 1060
Query: 614 DLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAM 673
+++G+I++V+GT SLI E V+F +L LA+VDEQ RFGV QR + SK
Sbjct: 1061 KIESGEISIVVGTTSLINENVKFKSLGLAVVDEQHRFGVNQRAKLLSK------------ 1108
Query: 674 VNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN 733
G P PH+L MSATPIPRTLA+ +G+M+L+ I + P GR+PI T +++ +
Sbjct: 1109 ---GGEP-------PHMLTMSATPIPRTLAMTKFGEMALSVIEEKPAGRLPIYTKVLDPS 1158
Query: 734 E 734
E
Sbjct: 1159 E 1159
>gi|255101722|ref|ZP_05330699.1| ATP-dependent DNA helicase RecG [Clostridium difficile QCD-63q42]
gi|255307591|ref|ZP_05351762.1| ATP-dependent DNA helicase RecG [Clostridium difficile ATCC 43255]
Length = 685
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 171/548 (31%), Positives = 262/548 (47%), Gaps = 101/548 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFIG 264
L K + V G+ + +L G +TL+ LL++FPR + D N + L+DG+ + I
Sbjct: 3 LYKDVQYVKGIGPKKADKLNKLGIFTLKDLLYYFPRQFEDRNNLKKIAQLEDGEK-VTIK 61
Query: 265 EIISSRGM---KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRG 321
+ISS K G + + ++V DE +G K ++ + K + +
Sbjct: 62 AVISSINTFSPKEGMTLTKIDV-------------KDE-----TGSAKLVFFN-KSYIKN 102
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
T + G+ + V GKV+ + N+ E+ ++ L + S + R
Sbjct: 103 T--------------FRPGDSILVFGKVK--KKFNNLELTSCELEYLTN----SPKNTCR 142
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G+ + I L+ +P+ I +++ L + A IH P
Sbjct: 143 FMPVYQLTYGVTNKEIMSIIRTVLEDKELIIQEYMPQRIIEKYRLCSIDFAVRNIHSPSS 202
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGL----GTQFEKEGLLDKYRKPRLNAAYMEG 496
+ +A R++F+E LQLG L+ G G +FE
Sbjct: 203 KESLKIALYRIVFEELLILQLG-LFVFKSGRNKEDGIKFE-------------------- 241
Query: 497 WSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEV 556
S KK++ ALP+ LT +Q A+ EII D+ MNRL+QGDVG GKTVVA LA
Sbjct: 242 TSKDLKKIISALPFKLTKAQNRALDEIIQDMNLEKIMNRLVQGDVGSGKTVVALLALANC 301
Query: 557 IGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQ 616
+ +GYQ A M PTE+LA QHY L + L + + LL GS KQ + + ++
Sbjct: 302 VLNGYQGALMAPTEILAGQHYISLTESLKDF-----GINVGLLIGSLTKKQKDTVLEQIK 356
Query: 617 TGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNS 676
+I ++IGTH+LI +KVEF+ + L I DEQ RFGV+QR + + K
Sbjct: 357 NNEIDILIGTHALIEDKVEFNNIGLVITDEQHRFGVMQRSKLSLK--------------- 401
Query: 677 DGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN--E 734
P +L M+ATPIPRTLAL LYGD+ ++ I +LPPGR PI+T IE + +
Sbjct: 402 --------GANPDILVMTATPIPRTLALILYGDLDISIIDELPPGRQPIETIAIEKSKRD 453
Query: 735 KGYENVYK 742
+ Y N+ +
Sbjct: 454 RAYNNLVR 461
>gi|452203936|ref|YP_007484069.1| ATP-dependent DNA helicase RecG [Dehalococcoides mccartyi DCMB5]
gi|452110995|gb|AGG06727.1| ATP-dependent DNA helicase RecG [Dehalococcoides mccartyi DCMB5]
Length = 818
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 169/566 (29%), Positives = 260/566 (45%), Gaps = 92/566 (16%)
Query: 187 ESSTSSEVGSLPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYAD 246
++ + S+ + P + P LD +S V G+S + G T+R LL++FP + D
Sbjct: 100 KAKSPSKTPAKPKADTRLPALDGDVSLVKGISAATAPKFHKLGVNTVRDLLYYFPNRHLD 159
Query: 247 LQNAQ--IDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNID 304
+ L+ G I + S+ G S TE GD D
Sbjct: 160 YSRLKKISQLEAGPEQTIIANVWQSKVNFMGGRRS------------TEAVLGD-----D 202
Query: 305 SGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYN 364
+G + ++ + R K V +SG+V + +E E+
Sbjct: 203 TGNMRAVWFNNPYMVRNL---------------KPNARVVLSGRVSIFQGRPVFESPEW- 246
Query: 365 IDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEF 423
+ L DE DL GR P+YP GL+ LR + + N D +P E +
Sbjct: 247 -EELPDEADLI--HTGRLVPVYPLTAGLHQRSLRRLMKNFIDISSPNISDFMPAETLKRT 303
Query: 424 GLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDK 483
LL L +A H P + + AR RL FDE F LQLG +L E+ G
Sbjct: 304 RLLPLSEAIRQAHFPDDEELKNAARNRLAFDELFILQLG----VLAKKKRWHEQAGRALN 359
Query: 484 YRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGC 543
P ++ + + LP+ LT +Q +++I D+ + VPM+RLLQG+VG
Sbjct: 360 VNIPDID------------RFVSKLPFKLTDAQTKCLADIKADISKGVPMSRLLQGEVGS 407
Query: 544 GKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNM-------------EED 590
GKT+VA ++ +G Q AFM PTE+LA QH++ + +L ++ E
Sbjct: 408 GKTIVAVISLFTAAANGLQGAFMAPTEILAEQHFKSVTRLFASIARVSTLLDGIYTFEGL 467
Query: 591 KHKP-KIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQR 649
+P K+ALL Q ++++ ++ G++ + IGTH+LI +++ F +L LA++DEQ R
Sbjct: 468 LDRPLKVALLISDMKGSQKDILKEKIKKGEVDIAIGTHALIQKEIRFKSLGLAVIDEQHR 527
Query: 650 FGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGD 709
FGV QR SK + PH+L M+ATPIPRTLAL LYGD
Sbjct: 528 FGVEQRSALRSK-----------------------GLNPHILIMTATPIPRTLALTLYGD 564
Query: 710 MSLTQITDLPPGRIPIKTYIIEGNEK 735
+ L+ I +LPPGR IKT ++ ++
Sbjct: 565 LDLSVIDELPPGRQSIKTRWLKPEQR 590
>gi|73748952|ref|YP_308191.1| ATP-dependent DNA helicase RecG [Dehalococcoides sp. CBDB1]
gi|73660668|emb|CAI83275.1| ATP-dependent DNA helicase RecG [Dehalococcoides sp. CBDB1]
Length = 740
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 169/567 (29%), Positives = 260/567 (45%), Gaps = 92/567 (16%)
Query: 187 ESSTSSEVGSLPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYAD 246
++ + S+ + P + P LD +S V G+S + G T+R LL++FP + D
Sbjct: 22 KAKSPSKTPAKPKADTRLPALDGDVSLVKGISAATAPKFHKLGVNTVRDLLYYFPNRHLD 81
Query: 247 LQNAQ--IDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNID 304
+ L+ G I + S+ G S TE GD D
Sbjct: 82 YSRLKKISQLEAGPEQTIIANVWQSKVNFMGGRRS------------TEAVLGD-----D 124
Query: 305 SGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYN 364
+G + ++ + R K V +SG+V + +E E+
Sbjct: 125 TGNMRAVWFNNPYMVRNL---------------KPNARVVLSGRVSIFQGRPVFESPEW- 168
Query: 365 IDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEF 423
+ L DE DL GR P+YP GL+ LR + + N D +P E +
Sbjct: 169 -EELPDEADLI--HTGRLVPVYPLTAGLHQRSLRRLMKNFIDISSPNISDFMPAETLKRT 225
Query: 424 GLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDK 483
LL L +A H P + + AR RL FDE F LQLG +L E+ G
Sbjct: 226 RLLPLSEAIRQAHFPDDEELKNAARNRLAFDELFILQLG----VLAKKKRWHEQAGRALN 281
Query: 484 YRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGC 543
P ++ + + LP+ LT +Q +++I D+ + VPM+RLLQG+VG
Sbjct: 282 VNIPDID------------RFVSKLPFKLTDAQTKCLADIKADISKGVPMSRLLQGEVGS 329
Query: 544 GKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNM-------------EED 590
GKT+VA ++ +G Q AFM PTE+LA QH++ + +L ++ E
Sbjct: 330 GKTIVAVISLFTAAANGLQGAFMAPTEILAEQHFKSVTRLFASIARVSTLLDGIYTFEGL 389
Query: 591 KHKP-KIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQR 649
+P K+ALL Q ++++ ++ G++ + IGTH+LI +++ F +L LA++DEQ R
Sbjct: 390 LDRPLKVALLISDMKGSQKDILKEKIKKGEVDIAIGTHALIQKEIRFKSLGLAVIDEQHR 449
Query: 650 FGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGD 709
FGV QR SK + PH+L M+ATPIPRTLAL LYGD
Sbjct: 450 FGVEQRSALRSK-----------------------GLNPHILIMTATPIPRTLALTLYGD 486
Query: 710 MSLTQITDLPPGRIPIKTYIIEGNEKG 736
+ L+ I +LPPGR IKT ++ ++
Sbjct: 487 LDLSVIDELPPGRQSIKTRWLKPEQRN 513
>gi|405373862|ref|ZP_11028521.1| ATP-dependent DNA helicase RecG [Chondromyces apiculatus DSM 436]
gi|397087376|gb|EJJ18426.1| ATP-dependent DNA helicase RecG [Myxococcus sp. (contaminant ex DSM
436)]
Length = 1021
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 169/538 (31%), Positives = 249/538 (46%), Gaps = 92/538 (17%)
Query: 217 LSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFIGEIISSRGMKA 274
L +L L+ G + +L PR Y D + + +L+ G+ + +G + + +
Sbjct: 337 LGPKLVSTLDKKGLRRMGDILFMLPRCYEDRRQLRTIAELEPGERGVTVGIVKVADFVPG 396
Query: 275 GCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIE 334
+VG SG Y F + P+LKS
Sbjct: 397 RQGRRMFRAVVGDR----------------SGSIAATY-----------FNAGPWLKS-- 427
Query: 335 GKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNA 394
+ VG+ + +SG+VRA + EM I+ +D D + R P+YP
Sbjct: 428 -RFTVGKRIVLSGEVRATMTGR--EMAHPEIEPAEDLDSTTSVHFNRIVPVYPGFERGEQ 484
Query: 395 SLLRDTIARALQALPANFD-PVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL------- 446
R+ +R + D P+P + L+ L DA IH P +ADL
Sbjct: 485 RSFRELTSRVGEQFAHELDDPLPMGLRHRMELMGLPDALRYIHFPP--GDADLEALDAHQ 542
Query: 447 --ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
A +RL FDE F+LQLG L+ G + E G+ PRL A
Sbjct: 543 SPAHRRLAFDELFFLQLG---MALKRQGVKAEV-GIAFDVSAPRLEKARG---------- 588
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
ALP+ LT +Q + E+ D+ + PMNRL+QGDVG GKT VA ++ + + +GYQ A
Sbjct: 589 --ALPFQLTGAQARVVEELCHDMARAEPMNRLVQGDVGSGKTAVAMVSALIALQAGYQVA 646
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
M PTE+LA QH + K++ + ++ L++ + K R +R+ + GDI L +
Sbjct: 647 VMAPTEILAEQHERNFRKVMAPLGY-----QVGLVSAAGTAKSKRQVREAVARGDIHLAV 701
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+L+ V F L L ++DEQ RFGV+QR +T MS G PK
Sbjct: 702 GTHALLQADVSFDRLGLVVIDEQHRFGVLQR--------HTLMSKG---------PK--- 741
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKG--YENV 740
P VL M+ATPIPRTLA+ LYGD+ L+ I LPPGR PI+T + ++ YE+V
Sbjct: 742 ---PDVLVMTATPIPRTLAMTLYGDLDLSVIDQLPPGRTPIRTRVFNDKQRALVYESV 796
>gi|227550756|ref|ZP_03980805.1| DNA helicase RecG [Enterococcus faecium TX1330]
gi|257896396|ref|ZP_05676049.1| ATP-dependent DNA helicase RecG [Enterococcus faecium Com12]
gi|293379481|ref|ZP_06625625.1| ATP-dependent DNA helicase RecG [Enterococcus faecium PC4.1]
gi|227180074|gb|EEI61046.1| DNA helicase RecG [Enterococcus faecium TX1330]
gi|257832961|gb|EEV59382.1| ATP-dependent DNA helicase RecG [Enterococcus faecium Com12]
gi|292642004|gb|EFF60170.1| ATP-dependent DNA helicase RecG [Enterococcus faecium PC4.1]
Length = 678
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 253/527 (48%), Gaps = 95/527 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
LD I+ + G+ ++ L + G T+ LL ++P Y D+Q + ++ D + G
Sbjct: 4 LDDPITMLAGVGEKRAASLASLGIQTIEDLLTYYPFRYEDIQERNLNEIQDQEKVTLKGI 63
Query: 266 IISSRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
++S M + G S L+ + E +V N+ F
Sbjct: 64 VVSPPVMNRFGYKKSRLQFRMMQE---------HDVFNVS-------------------F 95
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ P+LK K + E + V GK A R + I + DD S P
Sbjct: 96 FNQPYLKE---KVILSEEIAVYGKWDAKRK----ALNGMKILGSQTMDDFS--------P 140
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
IY + + L D I + Q + +P + +++ LL A +H PK+ +E
Sbjct: 141 IYHVNKSIRQTTLVDLIKKGFQEYGTLIEENLPNNLVEKYRLLDRASAVRSMHFPKNHEE 200
Query: 444 ADLARKRLIFDEFFYLQLGRLYQM-LEGL--GTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
A++R++F+EFF L+QM L+GL + E GL Y +L
Sbjct: 201 NHQAKRRVVFEEFF------LFQMRLQGLKKAEKAETNGLEILYDVQKL----------- 243
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
K+ + LP+ LT++Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G
Sbjct: 244 -KEFTQKLPFELTNAQKRVTNEICRDLRSPQHMQRLLQGDVGSGKTVVAAIALYATVTAG 302
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
+Q A MVPTE+LA QH E L +L D ++ +ALLTGST K+ R + + L+ G+I
Sbjct: 303 FQGALMVPTEILAQQHMESLQQLF-----DPNEVTVALLTGSTKTKERRELLEKLERGEI 357
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+L+ + VEF L L I DEQ RFGV QR K +
Sbjct: 358 NVVIGTHALLQDGVEFQNLGLVITDEQHRFGVNQRKVLREKGW----------------- 400
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLA+ YG+M ++ I +LP GRIPI+T
Sbjct: 401 ------RPDVLFMTATPIPRTLAITAYGEMDVSIIDELPAGRIPIET 441
>gi|119357864|ref|YP_912508.1| ATP-dependent DNA helicase RecG [Chlorobium phaeobacteroides DSM
266]
gi|119355213|gb|ABL66084.1| ATP-dependent DNA helicase RecG [Chlorobium phaeobacteroides DSM
266]
Length = 707
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 165/549 (30%), Positives = 253/549 (46%), Gaps = 96/549 (17%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFIG 264
+ + + G+ R L G + + L +FPR Y D + + +L +G+ +G
Sbjct: 4 MRSSLRALQGVGPRRADTLSEAGIHDVGDLYDYFPRRYLDRRAMRRISELLNGETVTVVG 63
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
++ + G + S +V++ E E +FRG R+
Sbjct: 64 RVLKTVQEGQGVARSRFKVLLADETGVLELV----------------------WFRGVRY 101
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLK---------DEDDLS 375
F K + G+ + V GKV +M+ + D L + DL
Sbjct: 102 ----FSKML----ATGDVLAVFGKVGYF--GRQAQMQHPDFDKLGSGVQASGSGESSDLE 151
Query: 376 LRAKGRPYPIYPS-----KGGLNASLLRDTIARALQALP-ANFDPVPKEITQEFGLLCLF 429
L GR +Y + + GL++ LR + +A P + + +E+ GL+ L
Sbjct: 152 LYHTGRIISLYSTSDAMKQAGLSSRQLRMILLKAFDDHPPGREENLSEEMLAAHGLMPLG 211
Query: 430 DAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRL 489
+AY IH P + AR RL + E FY QL L+ + + ++ R
Sbjct: 212 EAYREIHFPATQETLAAARYRLKWTELFYAQL--LFAL---------------RRQEIRQ 254
Query: 490 N--AAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTV 547
N AA + +T+KL ALP+ LT +Q + I EI DL+ PMNRLLQGDVG GKT+
Sbjct: 255 NKTAARFDHSGEITRKLYEALPFDLTGAQKTVIREIYQDLRSGCPMNRLLQGDVGSGKTL 314
Query: 548 VAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQ 607
VA + +G Q+AFM PTE+LA QHY L + + + LL+G K+
Sbjct: 315 VAMFSIALAADNGLQSAFMAPTEILAVQHYLALKRAFQPL-----GLNVGLLSGRQRKKE 369
Query: 608 SRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSM 667
+ DL+ G I + +GTH++I E V +AL L I+DEQ RFGV+QR K
Sbjct: 370 RDAVLGDLRNGTIAIAVGTHAMIEEGVTMAALGLVIIDEQHRFGVLQRKALQEKA----- 424
Query: 668 SSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PHVL M+ATPIPRTL + ++GD+ ++ I ++PPGR P+ T
Sbjct: 425 ------------------LNPHVLLMTATPIPRTLCMGVFGDLDVSVINEMPPGRQPVVT 466
Query: 728 YIIEGNEKG 736
++ GNE G
Sbjct: 467 KLLAGNETG 475
>gi|441499723|ref|ZP_20981898.1| ATP-dependent DNA helicase RecG [Fulvivirga imtechensis AK7]
gi|441436463|gb|ELR69832.1| ATP-dependent DNA helicase RecG [Fulvivirga imtechensis AK7]
Length = 697
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 139/352 (39%), Positives = 191/352 (54%), Gaps = 49/352 (13%)
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANF------DPVPKEITQEFGLLCLFDAYMGIH 436
+P+Y + L L LQ + + +P+ + E+ LL +A +H
Sbjct: 148 HPVYNTTERLKQKYLDSKAISKLQRVLLQLSESRIKETLPQNLQSEYRLLSKKEALFNVH 207
Query: 437 QPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYR-KPRLNAAYME 495
P++ D A RL F+E FY+QL K +DK++ KP ++
Sbjct: 208 FPENADALQKALFRLKFEELFYVQLR----------LLKLKLARIDKFKGKP------LQ 251
Query: 496 GWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
S+LT+ LP+ LTS+Q I EI D+K MNRLLQGDVG GKT+VAF+ +
Sbjct: 252 DTSALTRFYNEHLPFDLTSAQKRVIKEIYHDMKSGQQMNRLLQGDVGSGKTIVAFICMLL 311
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
+GSG QA M PTE+LA+QHY+ L + D ME IALLTGST + ++I L
Sbjct: 312 AVGSGCQAVMMAPTEILASQHYQGLQEYADKME-----ITIALLTGSTKKSERKIIHSYL 366
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
++GD+ +++GTH+L+ + V+F L LAIVDEQ RFGV QR R K N
Sbjct: 367 KSGDLNIIVGTHALLEDIVQFKELGLAIVDEQHRFGVAQRSRLWQK-------------N 413
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
D PHVL M+ATPIPRTLA+ LYGD+ ++ I +LP GR PIKT
Sbjct: 414 KD--------FYPHVLVMTATPIPRTLAMTLYGDLDVSVIDELPAGRKPIKT 457
>gi|390934835|ref|YP_006392340.1| ATP-dependent DNA helicase RecG [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570336|gb|AFK86741.1| ATP-dependent DNA helicase RecG [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 682
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 175/537 (32%), Positives = 257/537 (47%), Gaps = 83/537 (15%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L K I V G+ + L+ G T++ L ++PR Y D + I +D + IGE
Sbjct: 3 LSKPIQYVKGVGPKRALLLKKIGIETVKDALEYYPREYEDREKI-IPID----MLKIGEK 57
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
+ + AG + I G I G SG + ++ +
Sbjct: 58 QTFKAYIAGKARE--HRIKGLIITKIPVKDG-------SGALELVWYNQ----------- 97
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
P++K+ K+GE ++GKV + E + D L+L A GR PIY
Sbjct: 98 -PYIKN---NFKLGEEYIINGKVSYKYGQVYVEN-----PTMDKSDVLNLNA-GRIVPIY 147
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
GL+ +LR+ I L+ D + K+ E+ LL + A IH P + +
Sbjct: 148 KLTDGLSQKILRNIIYSLLKEYINEIDEIFDKDFLAEYNLLEIRKAIKNIHFPDSSEMLE 207
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLL 505
A+ RLIF EFF LQLG L + ++ + K+++ L L
Sbjct: 208 RAKYRLIFQEFFILQLG-----LNLIKHKYNDDKSGIKFKQVDLRG------------FL 250
Query: 506 RALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAF 565
L + T +Q A++EI+ D+ MNRLLQGDVG GKTV+A A + +GYQA+
Sbjct: 251 DNLKFKFTKAQDKALNEILNDMYSGKVMNRLLQGDVGSGKTVIAAAAMYVAVKNGYQASI 310
Query: 566 MVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIG 625
+ PTE+LA QHY L +L D ++ K LLTGS K+ +I + ++ G+I +++G
Sbjct: 311 LAPTEILAKQHYLSLKELYDKLD-----IKTELLTGSISNKRKNLIIEKVKNGEIDVLVG 365
Query: 626 THSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQH 685
THSLI + V+F L LAI DEQ RFGV QR F D+
Sbjct: 366 THSLIEDNVQFKNLGLAITDEQHRFGVRQRAVFK-----------------------DKG 402
Query: 686 MAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEG--NEKGYENV 740
+VL M+ATPIPRTLAL LYGD+ ++ I +LPPGR ++TY + G E+ Y+ V
Sbjct: 403 NQTNVLVMTATPIPRTLALMLYGDLDMSIIDELPPGRKKVETYAVSGALRERAYKFV 459
>gi|258645745|ref|ZP_05733214.1| ATP-dependent DNA helicase RecG [Dialister invisus DSM 15470]
gi|260403114|gb|EEW96661.1| ATP-dependent DNA helicase RecG [Dialister invisus DSM 15470]
Length = 697
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 157/528 (29%), Positives = 240/528 (45%), Gaps = 85/528 (16%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQ--NAQIDLDDGQYFIFIG 264
L ++ V G+ R+ +LE G T+ L+ ++PR Y D DL G
Sbjct: 22 LSDAVTVVKGVGMRMKEKLERLGIKTVEDLISYYPRRYEDWTRITPMADLSYEMETAVYG 81
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
++ R + + S L V + + T +V + KK+ + +
Sbjct: 82 TVVEIREVHPRRNLSILTVTL------VDGTGAVNLVYFNQPWKKEQFAY---------- 125
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLS--LRAKGRP 382
G + GK+ Y R++ I E + L A +
Sbjct: 126 ---------------GSNILAYGKIE-------YNYRKWQISNADTEAVAAEELHAFKKL 163
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHID 442
P+YP G+ AS +R I A+ + +P ++ L+ A G+H P +
Sbjct: 164 VPVYPLTEGIRASQMRAMIRFAIDHAEGIRENLPADVLVREHLMGRMAAIRGMHDPAGWE 223
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
E AR+R F+E F++Q G LL K R+ +L
Sbjct: 224 EQRAARRRTAFEELFFMQAGI---------------QLLRKRRETDNVGIKCMPSGNLVH 268
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
++++ P++LT Q S +I ++ VPM RL+QGDVG GKT +A LA +++ +GYQ
Sbjct: 269 EVMKKFPFALTEGQKSVFRDIEDSMEGIVPMQRLVQGDVGSGKTAIAILALTKIVENGYQ 328
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
A M PTE+LA QH++ ++ M K A L+G T + + I + L+ G I +
Sbjct: 329 GALMAPTEVLAAQHFKTFQQVFKGM-----PVKTAYLSGHTKAAERKEILEQLKDGSIHI 383
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
+IGTH+LI E V FSAL L I DEQ RFGV QR SK
Sbjct: 384 LIGTHALIEENVVFSALGLVITDEQHRFGVKQRQALESK--------------------- 422
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+PHVL M+ATPIPRT+AL++YGD+ ++ I +PPGR P+KTY++
Sbjct: 423 --GKSPHVLIMTATPIPRTMALSVYGDLDVSFIKGMPPGRHPVKTYVV 468
>gi|307244280|ref|ZP_07526395.1| ATP-dependent DNA helicase RecG [Peptostreptococcus stomatis DSM
17678]
gi|306492430|gb|EFM64468.1| ATP-dependent DNA helicase RecG [Peptostreptococcus stomatis DSM
17678]
Length = 685
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 169/544 (31%), Positives = 261/544 (47%), Gaps = 108/544 (19%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADL--QNAQIDLDDGQ---YF 260
+L++ I V G+ + ++ G +T++ L++FPR + D Q L++G+
Sbjct: 4 VLNENIQFVKGIGPKKAEKMARLGIFTVKDALYYFPRQFEDRSRQKKIFQLEEGEKTGVR 63
Query: 261 IFIGEI--ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKF 318
+ I I ++ RG++ TE D D+G+ K ++ + K +
Sbjct: 64 VKIDRINSVNRRGLRI-----------------TEFYVSD-----DTGKAKLVFFN-KAY 100
Query: 319 FRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMRE-YNIDVLKDEDDLSLR 377
R T +VG+ V G V+ N + E +N ++ D+ D +
Sbjct: 101 LRNT--------------FRVGDIVKAFGSVK----KNLGPITELHNCEIEYDKID---K 139
Query: 378 AKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIH 436
G P+Y G+ + I ++ + D +PK I ++ L + A +H
Sbjct: 140 NTGIIVPVYSLTAGVGNKEVMGMIRNIFESSDISIDEYLPKWIVDKYNLCGVDFAIRNMH 199
Query: 437 QPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEG-----LGTQFEKEGLLDKYRKPRLNA 491
P+ + +A RLIF+E +LQLG ++G G +F++ +DK +
Sbjct: 200 FPEKKENVKIAMYRLIFEELLFLQLGLF--AVKGNNKVSKGIKFKRHEDMDKIEE----- 252
Query: 492 AYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFL 551
LP+ LT +Q A +I+ D+ MNRL+QGDVG GKTVVA L
Sbjct: 253 ---------------NLPFRLTRAQKKAYDDIMADMTSDRIMNRLVQGDVGSGKTVVAQL 297
Query: 552 ACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMI 611
A + +GYQ A+M PTE+LA QH E + DN ++ +LTGS+ K++ I
Sbjct: 298 ALANCVLNGYQGAYMAPTEILAKQHMESFKEFFDNT-----GIRVEVLTGSSTRKEASEI 352
Query: 612 RKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGM 671
KDL +G I ++IGTH+LI ++V+F+ L L I DEQ RFGV QRGR SK
Sbjct: 353 LKDLASGQIDILIGTHALIEDRVDFANLGLVITDEQHRFGVNQRGRLTSK---------- 402
Query: 672 AMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLAL LYGD+ ++ I +LPPGR PI+T IE
Sbjct: 403 -------------SENPDVLVMTATPIPRTLALILYGDLDISIIDELPPGRKPIETLAIE 449
Query: 732 GNEK 735
++
Sbjct: 450 KRKR 453
>gi|325957104|ref|YP_004292516.1| ATP-dependent DNA helicase RecG [Lactobacillus acidophilus 30SC]
gi|325333669|gb|ADZ07577.1| ATP-dependent DNA helicase RecG [Lactobacillus acidophilus 30SC]
Length = 678
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 171/517 (33%), Positives = 259/517 (50%), Gaps = 87/517 (16%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGEIISS 269
++ + G+ + L + G Y++ LL +FP Y +LQ +D + DGQ + G I+++
Sbjct: 10 VTDLKGVGTKTAADLGSLGIYSIYDLLFYFPFRYDELQTLPLDQIMDGQKVMLKG-IVAT 68
Query: 270 RGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPF 329
+G + + I ++V ++ F + P+
Sbjct: 69 EPFVSGFGYKKSRLSFKIRI-------DHDIVMVN-------------------FFNQPW 102
Query: 330 LKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSK 389
LKS K ++G+ V + GK R + + + V E+D + PIYP
Sbjct: 103 LKS---KIEIGQEVAIYGKYNVARQS----LSAFKF-VAAKENDSGMA------PIYPVN 148
Query: 390 GGLNASLLRDTIARALQA-LPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLAR 448
+ L + I A+ + L D VPKEI +++ LL + +H PK+ +A+LA+
Sbjct: 149 RHVKQKKLINLINLAIDSFLDQVQDIVPKEIMEKYRLLHDQEIIQKMHHPKNGHDAELAK 208
Query: 449 KRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRAL 508
+ IF EFF +L +L + G Q +G KY ++ ++LTK +L
Sbjct: 209 RSAIFREFFIFEL-QLALLANHDGKQ---QGYPKKYD--------LKEIANLTK----SL 252
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
P+ L+ Q ++EI D+ M RLLQGDVG GKTVVA A I +GYQAA MVP
Sbjct: 253 PFELSDDQKKVVNEIFADMHSDGQMRRLLQGDVGSGKTVVAVYAIFAAISAGYQAALMVP 312
Query: 569 TELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHS 628
TE+LATQH++ + +LL + ++ALLTG+T + R I ++L G I VIGTH+
Sbjct: 313 TEILATQHFKKIDELLRPL-----GVRVALLTGNTKTLERREIYRELTDGTINAVIGTHA 367
Query: 629 LIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAP 688
LI + V F L L I+DEQ RFGV QR A++N +P
Sbjct: 368 LIQKNVIFKKLGLVIIDEQHRFGVGQR---------------QALINKGDNPD------- 405
Query: 689 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
+LAM+ATPIPRTLAL +YGDM++++I LP GR PI
Sbjct: 406 -ILAMTATPIPRTLALTVYGDMTVSEIHHLPAGRKPI 441
>gi|289432949|ref|YP_003462822.1| ATP-dependent DNA helicase RecG [Dehalococcoides sp. GT]
gi|452205435|ref|YP_007485564.1| ATP-dependent DNA helicase RecG [Dehalococcoides mccartyi BTF08]
gi|288946669|gb|ADC74366.1| ATP-dependent DNA helicase RecG [Dehalococcoides sp. GT]
gi|452112491|gb|AGG08222.1| ATP-dependent DNA helicase RecG [Dehalococcoides mccartyi BTF08]
Length = 818
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 169/566 (29%), Positives = 260/566 (45%), Gaps = 92/566 (16%)
Query: 187 ESSTSSEVGSLPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYAD 246
++ + S+ + P + P LD +S V G+S + G T+R LL++FP + D
Sbjct: 100 KAKSPSKTPAKPKADTRLPALDGDVSLVKGISAATAPKFHKLGVNTVRDLLYYFPNRHLD 159
Query: 247 LQNAQ--IDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNID 304
+ L+ G I + S+ G S TE GD D
Sbjct: 160 YSRLKKISQLEAGPEQTIIANVWQSKVNFMGGRRS------------TEAVLGD-----D 202
Query: 305 SGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYN 364
+G + ++ + R K V +SG+V + +E E+
Sbjct: 203 TGNMRAVWFNNPYMVRNL---------------KPNARVVLSGRVSIFQGRPVFESPEW- 246
Query: 365 IDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEF 423
+ L DE DL GR P+YP GL+ LR + + N D +P E +
Sbjct: 247 -EELPDEADLI--HTGRLVPVYPLTAGLHQRSLRRLMKNFIDISSPNISDFMPAETLKRT 303
Query: 424 GLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDK 483
LL L +A H P + + AR RL FDE F LQLG +L E+ G
Sbjct: 304 RLLPLSEAIRQAHFPDDEELKNAARNRLAFDELFILQLG----VLAKKKRWHEQAGRALN 359
Query: 484 YRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGC 543
P ++ + + LP+ LT +Q +++I D+ + VPM+RLLQG+VG
Sbjct: 360 VNIPDID------------RFVSKLPFKLTDAQTRCLADIKADISKGVPMSRLLQGEVGS 407
Query: 544 GKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNM-------------EED 590
GKT+VA ++ +G Q AFM PTE+LA QH++ + +L ++ E
Sbjct: 408 GKTIVAVISLFTAAANGLQGAFMAPTEILAEQHFKSVTRLFASIARVSTLLDGIYTFEGL 467
Query: 591 KHKP-KIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQR 649
+P K+ALL Q ++++ ++ G++ + IGTH+LI +++ F +L LA++DEQ R
Sbjct: 468 LDRPLKVALLISDMKGSQKDILKEKIKKGEVDIAIGTHALIQKEIRFKSLGLAVIDEQHR 527
Query: 650 FGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGD 709
FGV QR SK + PH+L M+ATPIPRTLAL LYGD
Sbjct: 528 FGVEQRSALRSK-----------------------GLNPHILIMTATPIPRTLALTLYGD 564
Query: 710 MSLTQITDLPPGRIPIKTYIIEGNEK 735
+ L+ I +LPPGR IKT ++ ++
Sbjct: 565 LDLSVIDELPPGRQSIKTRWLKPEQR 590
>gi|160935086|ref|ZP_02082472.1| hypothetical protein CLOLEP_03962 [Clostridium leptum DSM 753]
gi|156866539|gb|EDO59911.1| ATP-dependent DNA helicase RecG [Clostridium leptum DSM 753]
Length = 682
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 133/355 (37%), Positives = 190/355 (53%), Gaps = 47/355 (13%)
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
+P+Y GL++ + + +AL LP DP+P+E+ + L L A IH P+
Sbjct: 143 HPVYGQTEGLSSRQIEAAVRQALSLLPERVNDPLPEELRASYQLEELGQAIRDIHLPQSE 202
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
+ AR+RLIF+E F LQLG L Q+ K R R + ++ + +
Sbjct: 203 PALNAARRRLIFEELFVLQLG-LCQL---------------KTRNRRETSCFLT--ADRS 244
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
++ LP+ T +Q A++E + D+++ PMNRL+QGDVG GKT VA C G
Sbjct: 245 QEFFSCLPFPPTGAQRRAVAECVADMRRKTPMNRLIQGDVGSGKTAVAAALCYCAAREGI 304
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q+AFM PTE+LA QHY + KL + +ALLTGST ++ R + L+ G I
Sbjct: 305 QSAFMAPTEILAEQHYHTMEKLFEGT-----GVSVALLTGSTKQRERRELLFALKAGQIH 359
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
L+IGTH+L+++ VEF L L I DEQ RFGV QR K
Sbjct: 360 LLIGTHALLSDPVEFQRLGLVITDEQHRFGVAQRAALAGK-------------------- 399
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKG 736
PH+L MSATPIPRTLAL +YGD+ ++ + +LPPGR I T+ I+ ++G
Sbjct: 400 ---GENPHLLVMSATPIPRTLALMIYGDLDVSVLDELPPGRQKIDTFWIDSKKRG 451
>gi|431438081|ref|ZP_19513244.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1630]
gi|431760110|ref|ZP_19548714.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E3346]
gi|430586916|gb|ELB25158.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1630]
gi|430625379|gb|ELB62019.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E3346]
Length = 678
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 174/527 (33%), Positives = 251/527 (47%), Gaps = 95/527 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
LD I+ + G+ ++ L + G T+ LL ++P Y D+Q + ++ D + G
Sbjct: 4 LDDPITMLAGVGEKRAASLASLGIQTIEDLLTYYPFRYEDIQERNLNEIQDQEKVTLKGI 63
Query: 266 IISSRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
++S M + G S L+ + E +V N+ F
Sbjct: 64 VVSPPVMNRFGYKKSRLQFRMMQE---------HDVFNVS-------------------F 95
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ P+LK K + E + V GK A R + I + DD S P
Sbjct: 96 FNQPYLKE---KVILSEEIAVYGKWDAKRK----ALNGMKILGSQTMDDFS--------P 140
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
IY + + L D I + Q + +P + +++ LL A +H PK +E
Sbjct: 141 IYHVNKSIRQTTLVDLIKKGFQEYGTLIEENLPNNLVEKYRLLDRASAVRSMHFPKDHEE 200
Query: 444 ADLARKRLIFDEFFYLQLGRLYQM-LEGL--GTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
A++R++F+EFF L+QM L+GL + E GL Y +L
Sbjct: 201 NHQAKRRVVFEEFF------LFQMRLQGLKKAEKAETNGLEILYDVQKL----------- 243
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
K+ + LP+ LT++Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G
Sbjct: 244 -KEFTQKLPFELTNAQKRVTNEICRDLRSPQHMQRLLQGDVGSGKTVVAAIALYATVTTG 302
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
+Q A MVPTE+LA QH E L +L D ++ IALLTGST K+ R + + L+ G I
Sbjct: 303 FQGALMVPTEILAQQHMESLQQLF-----DPNEVTIALLTGSTKAKERRELLEKLEQGKI 357
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+LI + VEF L L I DEQ RFGV QR K +
Sbjct: 358 NVVIGTHALIQDGVEFQNLGLVITDEQHRFGVNQRKVLREKGW----------------- 400
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLA+ YG+M ++ I +LP GRIPI+T
Sbjct: 401 ------RPDVLFMTATPIPRTLAITAYGEMDVSIIDELPAGRIPIET 441
>gi|366053077|ref|ZP_09450799.1| ATP-dependent DNA helicase RecG [Lactobacillus suebicus KCTC 3549]
Length = 678
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 148/424 (34%), Positives = 212/424 (50%), Gaps = 72/424 (16%)
Query: 321 GTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG 380
G F + P+LKS K ++G V + GK R +M + + D+D S
Sbjct: 92 GVTFFNQPYLKS---KIELGNDVAIFGKWDGQRR----QMTGSKLVNVGDDDSKSFS--- 141
Query: 381 RPYPIYPSKGGLNASLLRDTIARAL---QALPANFDPVPKEITQEFGLLCLFDAYMGIHQ 437
P+Y + + LR I A Q + A +P + + + L+ + +H
Sbjct: 142 ---PVYSVNKHVRQTTLRKDIETAFKKYQEVIATL--LPHTLIEHYHLMERREMIKEMHF 196
Query: 438 PKHIDEADLARKRLIFDEFFYLQL-----GRLYQMLEGLGTQFEKEGLLDKYRKPRLNAA 492
P + A LAR+ ++EFF QL R Q GL + + +
Sbjct: 197 PSSDENAKLARRTAAYEEFFLFQLRLQATKRANQKRNGLEILYHNDEI------------ 244
Query: 493 YMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLA 552
K +++LPY LT +Q +++I DL+QP+ MNRLLQGDVG GKT+VA +A
Sbjct: 245 ---------KDFIKSLPYELTGAQKRVVNDICRDLRQPIQMNRLLQGDVGSGKTIVAAIA 295
Query: 553 CMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIR 612
I +GYQAA MVPTELLA QH ++L KL DN+ + + LLTG+ KQ +
Sbjct: 296 IYATITAGYQAALMVPTELLAEQHAQNLAKLFDNLPVN-----VGLLTGTLTQKQHNALA 350
Query: 613 KDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMA 672
K ++ G I L+IGTH+LI + VE++ L L I DEQ RFGV QR + K +
Sbjct: 351 KQIKAGAINLIIGTHALIQDSVEYANLGLIITDEQHRFGVGQRQKLREKGNH-------- 402
Query: 673 MVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEG 732
P VLAM+ATPIPRTLA+ YG+M ++ I +LP GR+PI T +
Sbjct: 403 ---------------PDVLAMTATPIPRTLAITAYGEMDVSIIDELPKGRLPIITRWLRS 447
Query: 733 NEKG 736
N+ G
Sbjct: 448 NQVG 451
>gi|431753081|ref|ZP_19541758.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E2620]
gi|430612586|gb|ELB49621.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E2620]
Length = 678
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 253/527 (48%), Gaps = 95/527 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
LD I+ + G+ ++ L + G T+ LL ++P Y D+Q + ++ D + G
Sbjct: 4 LDDPITMLAGVGEKRAASLASLGIQTIEDLLTYYPFRYEDIQERNLNEIQDQEKVTLKGI 63
Query: 266 IISSRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
++S M + G S L+ + E +V N+ F
Sbjct: 64 VVSPPVMNRFGYKKSRLQFRMMQE---------HDVFNVS-------------------F 95
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ P+LK K + E + V GK A R + I + DD S P
Sbjct: 96 FNQPYLKE---KVILSEEIAVYGKWDAKRK----ALNGMKILGSQTMDDFS--------P 140
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
IY + + L D I + Q + +P + +++ LL A +H PK+ +E
Sbjct: 141 IYHVNKSIRQTTLVDLIKKGFQEYGTLIEENLPNNLVEKYRLLDRASAVRSMHFPKNHEE 200
Query: 444 ADLARKRLIFDEFFYLQLGRLYQM-LEGL--GTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
A++R++F+EFF L+QM L+GL + E GL Y +L
Sbjct: 201 NHQAKRRVVFEEFF------LFQMRLQGLKKAEKAETNGLEILYDVQKL----------- 243
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
K+ + LP+ LT++Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G
Sbjct: 244 -KEFTQKLPFELTNAQKRVTNEICRDLRSPQHMQRLLQGDVGSGKTVVAAIALYATVTAG 302
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
+Q A MVPTE+LA QH E L +L D ++ +ALLTGST K+ R + + L+ G+I
Sbjct: 303 FQGALMVPTEILAQQHMESLQQLF-----DPNEVTVALLTGSTKTKERRELLEKLERGEI 357
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+L+ + VEF L L I DEQ RFGV QR K +
Sbjct: 358 NVVIGTHALLQDGVEFQNLGLVITDEQHRFGVNQRKVLREKGW----------------- 400
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLA+ YG+M ++ I +LP GRIPI+T
Sbjct: 401 ------RPDVLFMTATPIPRTLAITAYGEMDVSIIDELPAGRIPIET 441
>gi|374813271|ref|ZP_09717008.1| ATP-dependent DNA helicase RecG [Treponema primitia ZAS-1]
Length = 716
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 152/382 (39%), Positives = 204/382 (53%), Gaps = 50/382 (13%)
Query: 375 SLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYM 433
+++ G P+YP GLN L R I +AL D +P I Q GLL +A
Sbjct: 138 AVKGFGHVLPVYPLTAGLNQGLFRRLIRQALTQYAKPLEDEIPPAIIQRDGLLPKSEAIR 197
Query: 434 GIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAY 493
H P ++E D ARK LI++E FYL++ + +E T L+ K R+ A
Sbjct: 198 AYHFPASVEELDRARKTLIYEELFYLEVIIGRRAMERKNTA----PLVQKKRE----AGK 249
Query: 494 MEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLAC 553
S+L K+LL LP+SLT+ Q +A++EI D+ PM RLLQGDVG GKT+VAFLA
Sbjct: 250 DGELSALQKRLLERLPFSLTAGQSAAVTEINRDMDGEYPMARLLQGDVGSGKTLVAFLAA 309
Query: 554 MEVI----GSG-------YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGS 602
+ + G G QAA + PTELLA QH E+ +LL+ + + A LTG+
Sbjct: 310 LRAVESLSGEGGQASSPHGQAAILAPTELLARQHAENAARLLEPV-----GIRPAFLTGN 364
Query: 603 TPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKL 662
+ K L GDI +V+GTH+L + V + LRL +VDEQ RFGV QR +K
Sbjct: 365 LKAAGRSNLLKALAAGDIDIVVGTHALFSRDVVYRDLRLVVVDEQHRFGVTQRQAIMAK- 423
Query: 663 YYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGR 722
H P +L MSATPIPRTLAL ++GDM ++ I DLPPGR
Sbjct: 424 --------------------GDH--PDLLMMSATPIPRTLALTVFGDMDVSVIPDLPPGR 461
Query: 723 IPIKTYII-EGNE-KGYENVYK 742
P+KT++ E NE K Y+ V K
Sbjct: 462 KPVKTHLAKESNEAKVYDFVRK 483
>gi|293380322|ref|ZP_06626396.1| ATP-dependent DNA helicase RecG [Lactobacillus crispatus 214-1]
gi|290923137|gb|EFE00066.1| ATP-dependent DNA helicase RecG [Lactobacillus crispatus 214-1]
Length = 678
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 170/517 (32%), Positives = 255/517 (49%), Gaps = 87/517 (16%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGEIISS 269
++ + G+ + +L + G Y++ LL +FP Y +LQ +D + DGQ + G I+++
Sbjct: 10 VTDLKGVGTKTTAELGSLGIYSIYDLLFYFPFRYDELQTLPLDQIMDGQKVMLKG-IVAT 68
Query: 270 RGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPF 329
+ + + I +V+ ++ F + P+
Sbjct: 69 EAFVSRFGYKKTRLSFKMRI-------DHDVIMVN-------------------FFNQPW 102
Query: 330 LKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSK 389
LK+ K ++G+ V + GK R + + + V E+D + PIYP
Sbjct: 103 LKN---KIEIGQEVAIYGKYNVARQS----LTAFKF-VAAKENDSGMA------PIYPVN 148
Query: 390 GGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLAR 448
+ L D I A+ D VP+++ QE+ LL +H PK+ EA+LA+
Sbjct: 149 RHVKQKKLVDLINVAIDDFIDQVQDIVPEKLRQEYRLLKDQVIIEKMHHPKNSHEAELAK 208
Query: 449 KRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRAL 508
+ IF EFF +L +L + G Q G KY + +L ++L
Sbjct: 209 RSAIFREFFIFEL-QLALLTRNDGKQM---GYAKKYDLTEI------------AQLTKSL 252
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
P+ L+ Q ++EI D+ M RLLQGDVG GKTVVA A I +GYQAA MVP
Sbjct: 253 PFELSDDQKHVVNEIFADMHSDGQMRRLLQGDVGSGKTVVAVYAIFAAITAGYQAALMVP 312
Query: 569 TELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHS 628
TE+LATQH++ + +LL + ++ALLTG+T + R I ++L G I +VIGTH+
Sbjct: 313 TEILATQHFKKIDELLRPL-----GVRVALLTGNTKTLERREIYRELTDGTINVVIGTHA 367
Query: 629 LIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAP 688
LI + V F L L I+DEQ RFGV QR A++N K DQ P
Sbjct: 368 LIQDSVIFKKLGLVIIDEQHRFGVGQR---------------QALIN-----KGDQ---P 404
Query: 689 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
+LAM+ATPIPRTLAL +YGDM++++I LP GR PI
Sbjct: 405 DILAMTATPIPRTLALTVYGDMTVSEIHHLPAGRKPI 441
>gi|315038623|ref|YP_004032191.1| ATP-dependent DNA helicase RecG [Lactobacillus amylovorus GRL 1112]
gi|312276756|gb|ADQ59396.1| ATP-dependent DNA helicase RecG [Lactobacillus amylovorus GRL 1112]
Length = 678
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 171/517 (33%), Positives = 259/517 (50%), Gaps = 87/517 (16%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGEIISS 269
++ + G+ + L + G Y++ LL +FP Y +LQ +D + DGQ + G I+++
Sbjct: 10 VTDLKGVGTKTAADLGSLGIYSIYDLLFYFPFRYDELQTLPLDQIMDGQKVMLKG-IVAT 68
Query: 270 RGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPF 329
+G + + I ++V ++ F + P+
Sbjct: 69 EPFVSGFGYKKSRLSFKIRI-------DHDIVMVN-------------------FFNQPW 102
Query: 330 LKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSK 389
LKS K K+G+ V + GK R + + + V E+D + PIYP
Sbjct: 103 LKS---KIKIGQEVAIYGKYNVARQS----LSAFKF-VAAKENDSGMA------PIYPVN 148
Query: 390 GGLNASLLRDTIARALQA-LPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLAR 448
+ L + I A+ + L D VPKEI +++ LL + +H PK+ +A+LA+
Sbjct: 149 RHVKQKKLINLINLAIDSFLDQVQDIVPKEIMEKYRLLHDQEIIQKMHHPKNGHDAELAK 208
Query: 449 KRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRAL 508
+ IF EFF +L +L + G Q +G KY ++ ++LTK +L
Sbjct: 209 RSAIFREFFIFEL-QLALLANHDGKQ---QGYPKKYD--------LKEIANLTK----SL 252
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
P+ L+ Q ++EI D+ M RLLQGDVG GKT+VA A I +GYQAA MVP
Sbjct: 253 PFELSDDQKKVVNEIFADMHSDGQMRRLLQGDVGSGKTIVAVYAIFAAISAGYQAALMVP 312
Query: 569 TELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHS 628
TE+LATQH++ + +LL + ++ALLTG+T + R I +L G I +VIGTH+
Sbjct: 313 TEILATQHFKKIDELLRPL-----GVRVALLTGNTKTLERREIYCELTDGTINVVIGTHA 367
Query: 629 LIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAP 688
LI + V F L L I+DEQ RFGV QR A++N +P
Sbjct: 368 LIQKNVIFKKLGLVIIDEQHRFGVGQR---------------QALINKGDNPD------- 405
Query: 689 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
+LAM+ATPIPRTLAL +YGDM++++I LP GR PI
Sbjct: 406 -ILAMTATPIPRTLALTVYGDMTVSEIHHLPAGRKPI 441
>gi|313204849|ref|YP_004043506.1| ATP-dependent DNA helicase recg [Paludibacter propionicigenes WB4]
gi|312444165|gb|ADQ80521.1| ATP-dependent DNA helicase RecG [Paludibacter propionicigenes WB4]
Length = 698
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 131/338 (38%), Positives = 196/338 (57%), Gaps = 42/338 (12%)
Query: 392 LNASLLRDTIARALQAL-PANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKR 450
LN+ +L+ I +Q++ P D +P + Q+F L+ L ++ + +H PK+ + + AR+R
Sbjct: 162 LNSKMLQKIIFPVIQSIKPGIPDTLPAYLLQKFALMNLTESLVNVHFPKNANALNKARQR 221
Query: 451 LIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPY 510
L F+E FY+QL L Q T++ D++ K + +++ K LP+
Sbjct: 222 LKFEELFYIQLNILQQ------TKWR-----DQHFKGFVFGQIGHYFNTFFKDF---LPF 267
Query: 511 SLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTE 570
LT +Q + EI D+ MNRLLQGDVG GKT+VA +A + + +G+QA M PTE
Sbjct: 268 ELTGAQKRVLREIRIDVASGRQMNRLLQGDVGSGKTLVALMAMLMAVDNGFQACIMAPTE 327
Query: 571 LLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLI 630
+LATQH+ L + L +M +ALLTGST K + + L++G++ ++IGTH+LI
Sbjct: 328 ILATQHFASLTEFLGDM-----GVSVALLTGSTRPKARVELHEKLRSGELNILIGTHALI 382
Query: 631 AEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHV 690
+ V+FS L L ++DEQ RFGV QR R K + P PH+
Sbjct: 383 EDTVQFSNLGLVVIDEQHRFGVEQRARLWRK---------------NVQP-------PHI 420
Query: 691 LAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTY 728
L M+ATPIPRTLA+ LYGD+S++ I +LPPGR PI+TY
Sbjct: 421 LVMTATPIPRTLAMTLYGDLSVSVIDELPPGRKPIQTY 458
>gi|261207034|ref|ZP_05921723.1| ATP-dependent DNA helicase RecG [Enterococcus faecium TC 6]
gi|289565332|ref|ZP_06445782.1| ATP-dependent DNA helicase RecG [Enterococcus faecium D344SRF]
gi|294615352|ref|ZP_06695225.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1636]
gi|430850738|ref|ZP_19468495.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1185]
gi|260078662|gb|EEW66364.1| ATP-dependent DNA helicase RecG [Enterococcus faecium TC 6]
gi|289162822|gb|EFD10672.1| ATP-dependent DNA helicase RecG [Enterococcus faecium D344SRF]
gi|291591726|gb|EFF23362.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1636]
gi|430535097|gb|ELA75520.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1185]
Length = 678
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 174/527 (33%), Positives = 251/527 (47%), Gaps = 95/527 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
LD I+ + G+ ++ L + G T+ LL ++P Y D+Q + ++ D + G
Sbjct: 4 LDDPITMLAGVGEKRAASLASLGIQTIEDLLTYYPFRYEDIQERNLNEIQDQEKVTLKGI 63
Query: 266 IISSRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
++S M + G S L+ + E +V N+ F
Sbjct: 64 VVSPPVMNRFGYKKSRLQFRMMQE---------HDVFNVS-------------------F 95
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ P+LK K + E + V GK A R + I + DD S P
Sbjct: 96 FNQPYLKE---KVILSEEIAVYGKWDAKRK----ALNGMKILGSQTMDDFS--------P 140
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
IY + + L D I + Q + +P + +++ LL A +H PK +E
Sbjct: 141 IYHVNKSIRQTTLVDLIKKGFQEYGTLIEENLPNNLVEKYRLLDRASAVRSMHFPKDHEE 200
Query: 444 ADLARKRLIFDEFFYLQLGRLYQM-LEGL--GTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
A++R++F+EFF L+QM L+GL + E GL Y +L
Sbjct: 201 NHQAKRRVVFEEFF------LFQMRLQGLKKAEKAETNGLEILYDVQKL----------- 243
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
K+ + LP+ LT++Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G
Sbjct: 244 -KEFTQKLPFELTNAQKRVTNEICRDLRSPQHMQRLLQGDVGSGKTVVAAIALYATVTAG 302
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
+Q A MVPTE+LA QH E L +L D ++ IALLTGST K+ R + + L G+I
Sbjct: 303 FQGALMVPTEILAQQHMESLQQLF-----DPNEVTIALLTGSTKAKERRELLEKLGQGEI 357
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+LI + VEF L L I DEQ RFGV QR K +
Sbjct: 358 NVVIGTHALIQDGVEFQNLGLVITDEQHRFGVNQRKVLREKGW----------------- 400
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLA+ YG+M ++ I +LP GRIPI+T
Sbjct: 401 ------RPDVLFMTATPIPRTLAITAYGEMDVSIIDELPAGRIPIET 441
>gi|212550292|ref|YP_002308612.1| ATP-dependent DNA helicase RecG [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212549425|dbj|BAG84090.1| ATP-dependent DNA helicase RecG [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 700
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 143/354 (40%), Positives = 193/354 (54%), Gaps = 49/354 (13%)
Query: 394 ASLLRDTIARAL-QALPANFDPV----PKEITQEFGLLCLFDAYMGIHQPKHIDEADLAR 448
ASL +TI++ + Q L +P+ P I + L+ L +A IH PK + + A+
Sbjct: 161 ASLDSNTISQIMRQILEYTKEPLSETLPTGIIDKCKLISLDEAIHNIHFPKSDNLLEQAQ 220
Query: 449 KRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRAL 508
RL F+E FY+QL L L RK +L+ L L
Sbjct: 221 YRLKFEELFYVQLANL---------------LNPNRRKKQLDGFCFSKVGENFHFLKNNL 265
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
P+ LT +Q +EI D+ MNRL+QGDVG GKTVVA L+ + I +G+Q A MVP
Sbjct: 266 PFELTHAQERVFNEIRQDMNTGKQMNRLVQGDVGSGKTVVALLSILTAIDNGFQGAIMVP 325
Query: 569 TELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHS 628
TE+LATQHYE + LL+ K+ALLTGST K + +++GDI ++IGTH+
Sbjct: 326 TEILATQHYETISHLLEG-----STVKVALLTGSTKNKVREEMLPKVKSGDIQILIGTHA 380
Query: 629 LIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAP 688
LI + VEFS L L +VDEQ RFGV QR +KL+ D P
Sbjct: 381 LIEDSVEFSNLGLVVVDEQHRFGVTQR----AKLW------------------DKNSTPP 418
Query: 689 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII--EGNEKGYENV 740
HVL M+ATPIPRT+A+ +YGD++++ I +LPPGR PI+TY I E K YE V
Sbjct: 419 HVLVMTATPIPRTMAMTVYGDLNISTIDELPPGRKPIRTYHIYDEKRNKMYEYV 472
>gi|373454059|ref|ZP_09545939.1| ATP-dependent DNA helicase RecG [Dialister succinatiphilus YIT
11850]
gi|371936322|gb|EHO64051.1| ATP-dependent DNA helicase RecG [Dialister succinatiphilus YIT
11850]
Length = 666
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/347 (36%), Positives = 183/347 (52%), Gaps = 43/347 (12%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
P+YP G+ +RD I+ AL + + +P + + L+ +A +H PK+ +E
Sbjct: 130 PVYPLTEGIRIGKMRDMISIALDQVEDMDENLPPDTLKREHLMGRLEAARAMHNPKNWEE 189
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
AR+R F+E F++Q G L LL K R+ + + L +
Sbjct: 190 QKEARRRTAFEELFFMQAGIL---------------LLRKKRESHVMSIKCAPSGKLVRS 234
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
+L P+ LT+ Q A S+I D++ +PM RL+QGDVG GKT VA LA +++ +GYQ
Sbjct: 235 VLDNFPFHLTAGQQQAFSDIEDDMEGLIPMQRLIQGDVGSGKTAVAALALAKIVENGYQG 294
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A M PTE+LA QHY + + +A L+G T K+ I K L+ G I ++
Sbjct: 295 ALMAPTEVLAGQHYRTFQEFYKGL-----PIHVAYLSGQTKTKERNEILKGLKNGSIDVL 349
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
IGTH+LI E V F+ L L I DEQ RFGV QR +K Y
Sbjct: 350 IGTHALIEEDVVFAHLGLVITDEQHRFGVKQRKALETKGGY------------------- 390
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
PH+L M+ATPIPRT+AL++YGD+ L+ I +PPGR P+KTY I
Sbjct: 391 ----PHILVMTATPIPRTMALSIYGDLDLSSIRGMPPGRHPVKTYAI 433
>gi|430820981|ref|ZP_19439599.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E0045]
gi|430438966|gb|ELA49357.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E0045]
Length = 678
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 174/527 (33%), Positives = 251/527 (47%), Gaps = 95/527 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
LD I+ + G+ ++ L + G T+ LL ++P Y D+Q + ++ D + G
Sbjct: 4 LDDPITMLAGVGEKRAASLASLGIQTIEDLLTYYPFRYEDIQERNLNEIQDQEKVTLKGI 63
Query: 266 IISSRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
++S M + G S L+ + E +V N+ F
Sbjct: 64 VVSPPVMNRFGYKKSRLQFRMMQE---------HDVFNVS-------------------F 95
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ P+LK K + E + V GK A R + I + DD S P
Sbjct: 96 FNQPYLKE---KVILSEEIAVYGKWDAKRK----ALNGMKILGSQTMDDFS--------P 140
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
IY + + L D I + Q + +P + +++ LL A +H PK +E
Sbjct: 141 IYHVNKSIRQTTLVDLIKKGFQEYGTLIEENLPNNLVEKYRLLDRASAVRSMHFPKDHEE 200
Query: 444 ADLARKRLIFDEFFYLQLGRLYQM-LEGL--GTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
A++R++F+EFF L+QM L+GL + E GL Y +L
Sbjct: 201 NHQAKRRVVFEEFF------LFQMRLQGLKKAEKAETNGLEILYDVQKL----------- 243
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
K+ + LP+ LT++Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G
Sbjct: 244 -KEFTQKLPFELTNAQKRVTNEICRDLRSPQHMQRLLQGDVGSGKTVVAAIALYATVTAG 302
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
+Q A MVPTE+LA QH E L +L D ++ IALLTGST K+ R + + L G+I
Sbjct: 303 FQGALMVPTEILAQQHMESLQQLF-----DPNEVTIALLTGSTKAKERRELLEKLGQGEI 357
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+LI + VEF L L I DEQ RFGV QR K +
Sbjct: 358 NVVIGTHALIQDGVEFQNLGLVITDEQHRFGVNQRKVLREKGW----------------- 400
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLA+ YG+M ++ I +LP GRIPI+T
Sbjct: 401 ------RPDVLFMTATPIPRTLAITAYGEMDVSIIDELPAGRIPIET 441
>gi|260558329|ref|ZP_05830525.1| ATP-dependent DNA helicase RecG [Enterococcus faecium C68]
gi|293567889|ref|ZP_06679230.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1071]
gi|406580100|ref|ZP_11055320.1| ATP-dependent DNA helicase RecG [Enterococcus sp. GMD4E]
gi|406582779|ref|ZP_11057876.1| ATP-dependent DNA helicase RecG [Enterococcus sp. GMD3E]
gi|406585113|ref|ZP_11060108.1| ATP-dependent DNA helicase RecG [Enterococcus sp. GMD2E]
gi|406589735|ref|ZP_11064160.1| ATP-dependent DNA helicase RecG [Enterococcus sp. GMD1E]
gi|410937992|ref|ZP_11369850.1| DNA helicase RecG [Enterococcus sp. GMD5E]
gi|427396979|ref|ZP_18889605.1| ATP-dependent DNA helicase RecG [Enterococcus durans FB129-CNAB-4]
gi|430826400|ref|ZP_19444584.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E0164]
gi|430828814|ref|ZP_19446928.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E0269]
gi|430843095|ref|ZP_19460997.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1050]
gi|430861273|ref|ZP_19478862.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1573]
gi|430892072|ref|ZP_19484478.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1575]
gi|430952316|ref|ZP_19486359.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1576]
gi|430999199|ref|ZP_19488167.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1578]
gi|431209608|ref|ZP_19500969.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1620]
gi|431234963|ref|ZP_19502986.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1622]
gi|431255653|ref|ZP_19504776.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1623]
gi|431303501|ref|ZP_19508348.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1626]
gi|431747197|ref|ZP_19535996.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E2134]
gi|431764946|ref|ZP_19553472.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E4215]
gi|447911617|ref|YP_007393029.1| ATP-dependent DNA helicase RecG [Enterococcus faecium NRRL B-2354]
gi|260075503|gb|EEW63809.1| ATP-dependent DNA helicase RecG [Enterococcus faecium C68]
gi|291589474|gb|EFF21281.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1071]
gi|404454604|gb|EKA01526.1| ATP-dependent DNA helicase RecG [Enterococcus sp. GMD4E]
gi|404457516|gb|EKA04053.1| ATP-dependent DNA helicase RecG [Enterococcus sp. GMD3E]
gi|404463095|gb|EKA08793.1| ATP-dependent DNA helicase RecG [Enterococcus sp. GMD2E]
gi|404470391|gb|EKA15028.1| ATP-dependent DNA helicase RecG [Enterococcus sp. GMD1E]
gi|410733631|gb|EKQ75554.1| DNA helicase RecG [Enterococcus sp. GMD5E]
gi|425722726|gb|EKU85620.1| ATP-dependent DNA helicase RecG [Enterococcus durans FB129-CNAB-4]
gi|430445124|gb|ELA54908.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E0164]
gi|430482709|gb|ELA59814.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E0269]
gi|430498149|gb|ELA74157.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1050]
gi|430550306|gb|ELA90103.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1573]
gi|430555737|gb|ELA95272.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1575]
gi|430557451|gb|ELA96910.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1576]
gi|430563306|gb|ELB02535.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1578]
gi|430570640|gb|ELB09586.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1620]
gi|430572823|gb|ELB11659.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1622]
gi|430577851|gb|ELB16431.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1623]
gi|430580142|gb|ELB18622.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E1626]
gi|430606726|gb|ELB44064.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E2134]
gi|430629717|gb|ELB66106.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E4215]
gi|445187326|gb|AGE28968.1| ATP-dependent DNA helicase RecG [Enterococcus faecium NRRL B-2354]
Length = 678
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 174/527 (33%), Positives = 251/527 (47%), Gaps = 95/527 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
LD I+ + G+ ++ L + G T+ LL ++P Y D+Q + ++ D + G
Sbjct: 4 LDDPITMLAGVGEKRAASLASLGIQTIEDLLTYYPFRYEDIQERNLNEIQDQEKVTLKGI 63
Query: 266 IISSRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
++S M + G S L+ + E +V N+ F
Sbjct: 64 VVSPPVMNRFGYKKSRLQFRMMQE---------HDVFNVS-------------------F 95
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ P+LK K + E + V GK A R + I + DD S P
Sbjct: 96 FNQPYLKE---KVILSEEIAVYGKWDAKRK----ALNGMKILGSQTMDDFS--------P 140
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
IY + + L D I + Q + +P + +++ LL A +H PK +E
Sbjct: 141 IYHVNKSIRQTTLVDLIKKGFQEYGTLIEENLPNNLVEKYRLLDRASAVRSMHFPKDHEE 200
Query: 444 ADLARKRLIFDEFFYLQLGRLYQM-LEGL--GTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
A++R++F+EFF L+QM L+GL + E GL Y +L
Sbjct: 201 NHQAKRRVVFEEFF------LFQMRLQGLKKAEKAETNGLEILYDVQKL----------- 243
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
K+ + LP+ LT++Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G
Sbjct: 244 -KEFTQKLPFELTNAQKRVTNEICRDLRSPQHMQRLLQGDVGSGKTVVAAIALYATVTAG 302
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
+Q A MVPTE+LA QH E L +L D ++ IALLTGST K+ R + + L G+I
Sbjct: 303 FQGALMVPTEILAQQHMESLQQLF-----DPNEVTIALLTGSTKAKERRELLEKLGQGEI 357
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+LI + VEF L L I DEQ RFGV QR K +
Sbjct: 358 NVVIGTHALIQDGVEFQNLGLVITDEQHRFGVNQRKVLREKGW----------------- 400
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLA+ YG+M ++ I +LP GRIPI+T
Sbjct: 401 ------RPDVLFMTATPIPRTLAITAYGEMDVSIIDELPAGRIPIET 441
>gi|226355891|ref|YP_002785631.1| ATP-dependent DNA helicase RecG [Deinococcus deserti VCD115]
gi|226317881|gb|ACO45877.1| putative ATP-dependent DNA helicase RecG [Deinococcus deserti
VCD115]
Length = 780
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 172/546 (31%), Positives = 265/546 (48%), Gaps = 103/546 (18%)
Query: 197 LPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDL-- 254
LP +A + L PG +++L + G +TLR +LH +P + D + A DL
Sbjct: 101 LPPDAEVSRL-----DTGPGGARKLT----SLGLHTLRDVLHAYPHRHED-RRALPDLAE 150
Query: 255 -DDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYL 313
++GQ G +++ +EV + ET SG V
Sbjct: 151 VEEGQKVTVEGTVVAKSRRSPRPGMLVIEVTL-------ETPSGGRV------------- 190
Query: 314 HLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDD 373
+ T F P+ +E + + G + ++G+V+ N + E+ V +D
Sbjct: 191 ------KATWFNQ-PW---VERQLREGARLVLTGRVKRFGRNVQLGV-EHLETVDGAQDS 239
Query: 374 LSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYM 433
LS GR +Y SK G++ LR R+LQ++P + D +P Q++G+ L DA
Sbjct: 240 LS---TGRIVGVYDSKEGISQEFLRRAAFRSLQSVPLD-DYLPAHWRQKYGITDLSDALW 295
Query: 434 GIHQPKHIDEADLARK--RLIFDEFFYLQLGRLYQMLEGL--GTQFEKEGLLDKYRKPRL 489
GIH P DEA L+R RL FDE+ +L+L L Q + + G +FE G
Sbjct: 296 GIHFPA--DEAQLSRANARLRFDEYLFLELRMLLQGEDAVLQGKRFEARG---------- 343
Query: 490 NAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVA 549
+E + S+ LP+ +T++Q + EI D++ M RL+QGDVG GKT VA
Sbjct: 344 --DDIERFESV-------LPFRMTNAQRRVLLEITDDMRSERQMARLVQGDVGSGKTAVA 394
Query: 550 FLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSR 609
A + GYQ A M PTE+LA QHY +L+ L+ ++ ++ LL G+ KQ
Sbjct: 395 ACALYLAVRDGYQGALMAPTEILARQHYNNLVGYLNQLD-----VRVGLLIGAMAAKQKL 449
Query: 610 MIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSS 669
++ + G++ +V+GT +LI E V+F L LA++DE+ RFGV QR + +
Sbjct: 450 EMQTRIARGEVDVVVGTQALIQENVQFDNLGLAVIDEEHRFGVQQRRKLLAG-------- 501
Query: 670 GMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYI 729
P VL MSATPIPR+LAL YGD+ L+ I ++PPGR PI+T +
Sbjct: 502 -----------------RPDVLVMSATPIPRSLALTAYGDLELSVIDEMPPGRTPIETKL 544
Query: 730 IEGNEK 735
I+ +
Sbjct: 545 IQDTHR 550
>gi|374296569|ref|YP_005046760.1| ATP-dependent DNA helicase RecG [Clostridium clariflavum DSM 19732]
gi|359826063|gb|AEV68836.1| ATP-dependent DNA helicase RecG [Clostridium clariflavum DSM 19732]
Length = 693
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 176/541 (32%), Positives = 260/541 (48%), Gaps = 94/541 (17%)
Query: 200 EASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQY 259
E I+ LL + V G+ + QL G Y++ ++ ++PR Y D +
Sbjct: 2 EEDIKELLKMDVQKVKGVGQARAKQLHKLGIYSVEDIITYYPRDYEDRSRLKK------- 54
Query: 260 FIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFF 319
IGE++ C+F E I+ ++ + G +Y L K
Sbjct: 55 ---IGELVDGES----CTF---EGIIASKVTEHRFRKG-----------LTMYKVLIKDE 93
Query: 320 RGTRFTSIPFLKSIEGKH-KVGE----FVCVSGKVRAMRSNNH-YEMREYNI--DVLKDE 371
G T+ F + GK K GE F +SGK R + N YE E I +VLK
Sbjct: 94 TGA-ITATWFNQHYIGKVLKPGERYIFFGKISGKYRNLEVQNPVYEKLEDGIAKNVLK-- 150
Query: 372 DDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFD 430
P+YPS L+ + +R I+ AL + + +P++I +E+ L +
Sbjct: 151 ----------IVPVYPSTADLSQNTIRGVISNALDLVDGRLTEFLPEKILREYRLSEINY 200
Query: 431 AYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLN 490
+ IH P+ ++ AR RL+F+E F LQL L + FE ++ K
Sbjct: 201 SVRQIHFPRSDEDFKNARYRLVFEELFILQLCLL-----SVKKAFENNNKGIEFSK---- 251
Query: 491 AAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAF 550
ME + +++LP+ LT +Q EI D++ MNRL+QGDVG GKTVVA
Sbjct: 252 VPEMEDF-------IKSLPFKLTDAQRKVFEEIERDMESSNVMNRLVQGDVGSGKTVVAA 304
Query: 551 LACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRM 610
+A + + +GYQ A MVPT +LA QHY+ + L++ ALLTG+ Q
Sbjct: 305 MALFKAVRNGYQGALMVPTAILAEQHYQLISSLMEPF-----GINTALLTGNQTKNQKNE 359
Query: 611 IRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSG 670
I + +++G I ++IGTH+LI + VEF L L I DEQ RFGV QR
Sbjct: 360 ILEGIRSGKIDILIGTHALIEDNVEFMKLGLVITDEQHRFGVRQR--------------- 404
Query: 671 MAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
A+++ G AP V+ M+ATPIPRTLAL LYGD+ ++ I LPPGR P+KTY +
Sbjct: 405 -ALLSKKGE-------APDVIVMTATPIPRTLALILYGDLDISIIDQLPPGRKPVKTYAV 456
Query: 731 E 731
+
Sbjct: 457 D 457
>gi|325287658|ref|YP_004263448.1| ATP-dependent DNA helicase RecG [Cellulophaga lytica DSM 7489]
gi|324323112|gb|ADY30577.1| ATP-dependent DNA helicase RecG [Cellulophaga lytica DSM 7489]
Length = 701
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 156/509 (30%), Positives = 252/509 (49%), Gaps = 86/509 (16%)
Query: 228 CGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGC 287
G YT + LL+ FP Y LD QY+ S+ + + I+
Sbjct: 28 LGVYTYQDLLNLFPNRY---------LDKTQYYKI------SQLQRNSAEVQVIGKII-- 70
Query: 288 EIADTETTSGDEVVNI---DSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVC 344
+ + G +V D+G+ + ++ +K+ + ++P+
Sbjct: 71 HLKEVGQKRGKRLVATFVDDTGKMELVWFRGQKWIKENIKLNVPY--------------V 116
Query: 345 VSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGL-NASLLRDTIAR 403
+ GK N + M +++L+D + L+ +P IYPS L N + ++
Sbjct: 117 IYGKTNWF--NGTFSMPHPEMELLEDHKN-GLKVSMQP--IYPSSEKLTNKGITNKVTSK 171
Query: 404 ALQAL----PANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFY 458
LQ L A F + +P + +E L+ DA + IH PK + A+ RL F+E FY
Sbjct: 172 LLQQLFIDTKAQFAETLPVYLLKELKLIGKSDALLNIHFPKSQQDLAKAQFRLKFEELFY 231
Query: 459 LQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLS 518
+QL + + + ++ + + + + + +++ LP+ LT++Q
Sbjct: 232 IQL-------QLIAKKMVRKNKIKGFPFNAVGTYFSDFYNNY-------LPFELTNAQKR 277
Query: 519 AISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYE 578
+ EI DL MNRLLQGDVG GKT+VA + + + +G+QA M PTE+LATQHY
Sbjct: 278 VVKEIRADLGSNAQMNRLLQGDVGSGKTIVALMTMLLALDNGFQACLMAPTEILATQHYN 337
Query: 579 HLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSA 638
+ +LL + K K++LLTGS R+I ++L++G++ ++IGTH+L+ +KV++
Sbjct: 338 GITELLQGL-----KIKVSLLTGSVKKSARRIIHEELESGELHILIGTHALLEDKVQYKN 392
Query: 639 LRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPI 698
L LAI+DEQ RFGV QR + K M PH+L M+ATPI
Sbjct: 393 LGLAIIDEQHRFGVAQRAKLWRK----------------------NTMPPHILVMTATPI 430
Query: 699 PRTLALALYGDMSLTQITDLPPGRIPIKT 727
PRTLA++LYGD+ ++ I +LPPGR PIKT
Sbjct: 431 PRTLAMSLYGDLDISVIDELPPGRKPIKT 459
>gi|354558653|ref|ZP_08977907.1| ATP-dependent DNA helicase RecG [Desulfitobacterium metallireducens
DSM 15288]
gi|353545715|gb|EHC15165.1| ATP-dependent DNA helicase RecG [Desulfitobacterium metallireducens
DSM 15288]
Length = 809
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 167/546 (30%), Positives = 256/546 (46%), Gaps = 110/546 (20%)
Query: 208 DKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGEI 266
+ + + G+ QLE+ G T + LL +FPR Y + + +I+ L DG+ G++
Sbjct: 147 EHSLQYLKGVGPERAKQLEHLGVQTDKDLLLYFPRRYENRRLLRIEELKDGELATVSGKV 206
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
+S + KA + K + L +++ G FT+
Sbjct: 207 VSGQITKA--------------------------------RMKIVKLSIEQ--DGHLFTA 232
Query: 327 IPFLKS-IEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP--- 382
+ F ++ I + VG V V+GKVR + + D++K G P
Sbjct: 233 VWFNQTFILKQFPVGTLVTVTGKVRWQKRVPELQA----TDIIKT-------GTGTPPEI 281
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGL-LCLFDAYMGIHQPKHI 441
PIY L++ ++R+ + + +P F P+ QEF + L AY IH P
Sbjct: 282 IPIYSETARLSSKVIRNLVRGVISQVPTYF---PEVFPQEFQIGLDRPQAYREIHFPSSF 338
Query: 442 DEADLARKRLIFDEFFYLQLG--RLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSS 499
AR+R++F+E +LQL RL Q +E R + + G +
Sbjct: 339 QRLGQARERIVFEEVLFLQLAVARLRQGVE------------------REESPILTGGQT 380
Query: 500 LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
L + ++ LP+ LT++Q I EI D++ M RL+QGDVG GKT VA A ++ +GS
Sbjct: 381 LVEDFVKGLPFELTTAQKRVIHEIFRDMESSKGMTRLVQGDVGSGKTAVAMAALLKAVGS 440
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKP---KIALLTGSTPVKQSRMIRKDLQ 616
GYQ A M PTE+LA QH + L + +P ++ L G + + +++
Sbjct: 441 GYQGAMMAPTEILALQHVQSL--------REAFRPLGIRVVCLLGGQTRSEREKVLEEIA 492
Query: 617 TGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNS 676
G +V+GTH++I E V F AL LA+ DEQ RFGV QR M+ S
Sbjct: 493 EGTAQIVVGTHAIIQETVVFKALGLAVTDEQHRFGVKQR----------------TMLQS 536
Query: 677 DGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKG 736
G PHVL M+ATPIPRTLAL LYGD+ L+ + ++P GR PI T + +E+G
Sbjct: 537 KGQ-------NPHVLVMTATPIPRTLALTLYGDLQLSALDEMPKGRKPIITRKL--SERG 587
Query: 737 YENVYK 742
N+ K
Sbjct: 588 RSNLEK 593
>gi|91202709|emb|CAJ72348.1| similar to DNA helicase [Candidatus Kuenenia stuttgartiensis]
Length = 686
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 154/513 (30%), Positives = 239/513 (46%), Gaps = 89/513 (17%)
Query: 229 GFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVG 286
G T+ LL++FPR Y D Q + G G I + A + LEV V
Sbjct: 27 GIQTVHDLLYYFPRDYNDFSKIQKIAEAKTGDSITIQGTINGIQNRVARMGKTILEVFVS 86
Query: 287 CEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVS 346
E T ++ PFL + K ++G+ + +
Sbjct: 87 DETGVIAATWFNQ----------------------------PFLVN---KFRIGDRLFLH 115
Query: 347 GKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY---PIYPSKGGLNASLLRDTIAR 403
GKV S + ++ +++ D +A G + P+YP ++ S LR I
Sbjct: 116 GKVN---SYKYLQLLSPEYEIISDR-----QAGGSGWGIIPVYPLTEHISQSQLRKIIHA 167
Query: 404 ALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLG 462
A+Q D +P + +++ L + DA IH P ++ + A+ RL+++E F L++
Sbjct: 168 AIQEYVDLLEDALPLPLIKKYNFLPVADAIRHIHSPPSMELLNRAKNRLVYEELFCLEMA 227
Query: 463 RLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISE 522
L +YR + +++ + +P++LT +Q I E
Sbjct: 228 MA----------------LRRYRIKGETRIPFKAGANVDAHIRNIIPFTLTKAQERVIYE 271
Query: 523 IIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLK 582
I D+K PMNRLLQGDVG GKTVVA A + + +GYQA FM PTELLA QH+ L K
Sbjct: 272 IREDMKSDKPMNRLLQGDVGSGKTVVALYAALIAVANGYQATFMAPTELLAQQHFRTLQK 331
Query: 583 LLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLA 642
L + ++ LLTGS + + + G I L++GTH++I E V F L L
Sbjct: 332 FLSGSQ-----VRVCLLTGSGNATHKKNVIAQVSDGGIDLIVGTHAIIEESVSFKKLGLV 386
Query: 643 IVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTL 702
++DEQ +FGV+QR + K +P VL M+ATPIPRTL
Sbjct: 387 VIDEQHKFGVLQRLKLRKK-----------------------GASPDVLIMTATPIPRTL 423
Query: 703 ALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
+L L+GDM ++ + ++PPGRIP+KT+ + N++
Sbjct: 424 SLTLFGDMDISMLDEMPPGRIPVKTFWVSKNKE 456
>gi|255656538|ref|ZP_05401947.1| ATP-dependent DNA helicase RecG [Clostridium difficile QCD-23m63]
gi|296450011|ref|ZP_06891775.1| DNA helicase RecG [Clostridium difficile NAP08]
gi|296878392|ref|ZP_06902400.1| DNA helicase RecG [Clostridium difficile NAP07]
gi|296261281|gb|EFH08112.1| DNA helicase RecG [Clostridium difficile NAP08]
gi|296430690|gb|EFH16529.1| DNA helicase RecG [Clostridium difficile NAP07]
Length = 685
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 170/548 (31%), Positives = 261/548 (47%), Gaps = 101/548 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFIG 264
L K + V G+ + +L G +TL+ LL++FPR + D N + L+D + + I
Sbjct: 3 LYKDVQYVKGIGPKKADKLNKLGIFTLKDLLYYFPRQFEDRNNLKKIAQLEDSEK-VTIK 61
Query: 265 EIISSRGM---KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRG 321
+ISS K G + + ++V DE +G K ++ + K + +
Sbjct: 62 AVISSINTFSPKEGMTLTKIDV-------------KDE-----TGSAKLVFFN-KSYIKN 102
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
T + G+ + V GKV+ + N+ E+ ++ L + S + R
Sbjct: 103 T--------------FRPGDSILVFGKVK--KKFNNLELTSCELEYLTN----SPKNTCR 142
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G+ + I L+ +P+ I ++ L + A IH P
Sbjct: 143 FMPVYQLTYGVTNKEIMSIIRTVLEDKDLIIQEYMPQRIIDKYRLCSIDFAVRNIHSPNS 202
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGL----GTQFEKEGLLDKYRKPRLNAAYMEG 496
+ +A R++F+E LQLG L+ G G +FE
Sbjct: 203 KESLKIALYRIVFEELLILQLG-LFVFKSGRNKEDGIKFE-------------------- 241
Query: 497 WSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEV 556
S KK++ ALP+ LT +Q A+ EII D+ MNRL+QGDVG GKTVVA LA
Sbjct: 242 TSKDLKKIINALPFKLTKAQNRALGEIIQDMDSEKIMNRLVQGDVGSGKTVVALLALANC 301
Query: 557 IGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQ 616
+ +GYQ A M PTE+LA QHY L + L + + LL GS KQ + + ++
Sbjct: 302 VLNGYQGALMAPTEILAGQHYISLTESLKDF-----GINVGLLIGSLTKKQKDTVLEQVK 356
Query: 617 TGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNS 676
+I ++IGTH+LI +KVEF+ + L I DEQ RFGV+QR + + K
Sbjct: 357 NNEIDILIGTHALIEDKVEFNNIGLVITDEQHRFGVMQRSKLSLK--------------- 401
Query: 677 DGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN--E 734
+ P +L M+ATPIPRTLAL LYGD+ ++ I +LPPGR PI+T IE + +
Sbjct: 402 --------GVNPDILVMTATPIPRTLALILYGDLDISIIDELPPGRQPIETLAIEKSKRD 453
Query: 735 KGYENVYK 742
+ Y N+ +
Sbjct: 454 RAYNNLVR 461
>gi|431749390|ref|ZP_19538131.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E2297]
gi|430611519|gb|ELB48600.1| ATP-dependent DNA helicase RecG [Enterococcus faecium E2297]
Length = 678
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 251/527 (47%), Gaps = 95/527 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
LD I+ + G+ ++ L + G T+ LL ++P Y D+Q + ++ D + G
Sbjct: 4 LDDPITMLAGVGEKRAASLASLGIQTIEDLLTYYPFRYEDIQERNLNEIQDQEKVTLKGI 63
Query: 266 IISSRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
++S M + G S L+ + E +V N+ F
Sbjct: 64 VVSPPVMNRFGYKKSRLQFRMMQE---------HDVFNVS-------------------F 95
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ P+LK K + E + V GK A R + I + DD S P
Sbjct: 96 FNQPYLKE---KVILSEEIAVYGKWDAKRK----ALNGMKILGSQTMDDFS--------P 140
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
IY + + L D I + Q + +P + +++ LL A +H PK +E
Sbjct: 141 IYHVNKSIRQTTLVDLIKKGFQEYGTLIEENLPNNLVEKYRLLDRASAVRSMHFPKDHEE 200
Query: 444 ADLARKRLIFDEFFYLQLGRLYQM-LEGL--GTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
A++R++F+EFF L+QM L+GL + E GL Y +L
Sbjct: 201 NHQAKRRVVFEEFF------LFQMRLQGLKKAEKAETNGLEILYDVQKL----------- 243
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
K+ + LP+ LT++Q +EI DL+ P M RLLQGDVG GKTVVA +A + +G
Sbjct: 244 -KQFTQKLPFELTNAQKRVTNEICRDLRSPQHMQRLLQGDVGSGKTVVAAIALYATVTAG 302
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
+Q A MVPTE+LA QH E L +L D ++ IAL+TGST K+ R + + L+ G+
Sbjct: 303 FQGALMVPTEILAQQHMESLQQLF-----DPNEVTIALITGSTKAKERRELLEKLEQGEF 357
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+LI + VEF L L I DEQ RFGV QR K +
Sbjct: 358 NVVIGTHALIQDGVEFQNLGLVITDEQHRFGVNQRKVLREKGW----------------- 400
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLA+ YG+M ++ I +LP GRIPI+T
Sbjct: 401 ------RPDVLFMTATPIPRTLAITAYGEMDVSIIDELPAGRIPIET 441
>gi|57233949|ref|YP_181980.1| ATP-dependent DNA helicase RecG [Dehalococcoides ethenogenes 195]
gi|57224397|gb|AAW39454.1| ATP-dependent DNA helicase RecG [Dehalococcoides ethenogenes 195]
Length = 740
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 165/549 (30%), Positives = 252/549 (45%), Gaps = 92/549 (16%)
Query: 205 PLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIF 262
P LD I V G+S + G T+R LL++FP + D + L+ G
Sbjct: 40 PALDGDIYLVKGISAATAPKFHKMGINTVRDLLYYFPNRHLDYSRLKKISQLEAGSEQTI 99
Query: 263 IGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGT 322
I + S+ G S TE GD D+G + ++ + R
Sbjct: 100 IANVWQSKVNYMGGRRS------------TEAVLGD-----DTGNMRAVWFNNPYMVRNL 142
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
K V +SG+V +E E+ + L DE DL GR
Sbjct: 143 ---------------KPNARVVLSGRVSIFNGRPVFESPEW--EELPDEADLI--HTGRL 183
Query: 383 YPIYPSKGGLNASLLRDTIARALQ-ALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
P+YP GL+ LR + + + P D +P++ + LL L +A H P
Sbjct: 184 VPVYPLTAGLHQRSLRRLMKNFIDISTPGISDFLPEDTLKRTRLLPLAEAIRQAHFPDTE 243
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
+ D AR RL FDE F LQLG L + E+ G K P ++
Sbjct: 244 ELKDAARNRLAFDELFILQLGVLAKKKRWQ----EQTGRALKINLPAID----------- 288
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
+ LP+ LT +Q +++I D+ + VPM+RLLQG+VG GKT+VA ++ +G
Sbjct: 289 -HFISQLPFKLTDAQTKCLADIKADISKSVPMSRLLQGEVGSGKTIVAVISLFTAAANGL 347
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDK-------------HKP-KIALLTGSTPVKQ 607
Q AFM PTE+LA QH++ + +L ++ + +P ++AL+ Q
Sbjct: 348 QGAFMAPTEILAEQHFKSVTRLFASIAKVSTLLDGVYTFEGLLDRPLRVALMISDMKSSQ 407
Query: 608 SRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSM 667
++++ ++ G+I + IGTH+LI +++ F +L LA++DEQ RFGV QR SK
Sbjct: 408 KDILKEKIKKGEIDIAIGTHALIQKEIRFKSLGLAVIDEQHRFGVEQRSALRSK------ 461
Query: 668 SSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PH+L M+ATPIPRTLAL LYG++ L+ I +LPPGR IKT
Sbjct: 462 -----------------GLNPHILIMTATPIPRTLALTLYGELDLSVIDELPPGRQSIKT 504
Query: 728 YIIEGNEKG 736
++ ++
Sbjct: 505 RWLKPEQRN 513
>gi|414154289|ref|ZP_11410608.1| ATP-dependent DNA helicase recG [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411454080|emb|CCO08512.1| ATP-dependent DNA helicase recG [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 685
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 173/529 (32%), Positives = 246/529 (46%), Gaps = 92/529 (17%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L K + + G+ + QL G +TL LL+HFPR Y D +
Sbjct: 4 LFKPVQYLKGVGPQRAKQLAGMGIHTLWDLLYHFPRNYQDRSD----------------- 46
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFF---RGTR 323
+ I D T G VV K + L + K G+
Sbjct: 47 --------------IRPIHTYAHGDLATVKG--VVTASQETKPRRGLCITKLVLQESGST 90
Query: 324 FTSIPFLKS-IEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F ++ F + I ++ G+ + V+GKV R ++ + ++L ++ L GR
Sbjct: 91 FYAVWFNQPYIRKQYLPGQKLLVTGKVD--RGFGVPQVHVTDHELLSGDERLH---TGRI 145
Query: 383 YPIYPSKGGLNASLLRDTIARALQ---ALPANFDPVPKEITQEFGLLCLFDAYMGIHQPK 439
P+YP ++ LR I L +L F +P + L CL +A IH P
Sbjct: 146 VPVYPLAESISQRFLRSLIKNVLDQTGSLIPEF--LPDRMLDRHRLPCLPEALQEIHFPS 203
Query: 440 HIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSS 499
+ A KR + +E F Q+G L Q + + + + L + S
Sbjct: 204 DNEACSRAHKRFVLEELFLFQMGMLLQKSKNIKKAKKHQYLPE----------------S 247
Query: 500 LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
LT LL +LP+ LT +Q EI DL P PMNRLLQGDVG GKTVVA LA + GS
Sbjct: 248 LTDLLLNSLPFRLTPAQQRVWQEIAHDLAGPYPMNRLLQGDVGAGKTVVAALALCKAAGS 307
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
G Q+A M PTELLA QH + + +LL + ++ALLTGS + +++ D+ G+
Sbjct: 308 GLQSALMAPTELLAEQHAKSITELLAPL-----GVRVALLTGSARRGRQQLL-ADIAGGE 361
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
+ +VIGTH+LI ++++FS L L +VDEQ RFGV QR K
Sbjct: 362 VQVVIGTHALIQDRIQFSNLALVVVDEQHRFGVRQRAALQEK------------------ 403
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTY 728
+ P VL M+ATPIPRTLAL LYGD+ ++ + LPPGR IKTY
Sbjct: 404 -----GITPDVLVMTATPIPRTLALTLYGDLDVSVLDQLPPGRQDIKTY 447
>gi|118469068|ref|YP_886743.1| ATP-dependent DNA helicase RecG [Mycobacterium smegmatis str. MC2
155]
gi|118170355|gb|ABK71251.1| ATP-dependent DNA helicase RecG [Mycobacterium smegmatis str. MC2
155]
Length = 753
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 165/534 (30%), Positives = 251/534 (47%), Gaps = 84/534 (15%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNAQ-----IDLDDGQYFIFIGEIISSR--------GM 272
E+ G T+ LL H+PR Y+D + +DL++G++ FI I ++
Sbjct: 23 EHFGLRTVNDLLRHYPRKYSDGMTVRGEGEALDLEEGEHVTFIDVITEAQPGTMKRPVKT 82
Query: 273 KAGCSFS--FLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLK---KFFRGTRFTSI 327
K G F+ +L V +G T + ID K L L K+FR T +
Sbjct: 83 KTGKQFTPKYLRVKLGDHKPKVTATFFNANWMIDE-LKVGTRLMLSGEVKYFRDTVQLNH 141
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYP 387
P +E SG+ +S ++ +D+ + +PIYP
Sbjct: 142 PAFLVLESP---------SGRTIGTKS-----LKTIAEASGASGEDMLAEFEKEFFPIYP 187
Query: 388 SKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA 447
+ + + + I + L L DP+PK Q+ GL+ A IH + E D A
Sbjct: 188 ASAKMQSWDIYRCIRQVLAVLDPIPDPLPKSFVQQRGLMSEDQALRAIHLAANSTERDRA 247
Query: 448 RKRLIFDEFFYLQLG---RLYQMLEGLG--TQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
R+RL +DE LQ G R Y L G +GL+ R+
Sbjct: 248 RERLTYDEAIGLQWGLVARRYGELAASGPSAPLRVDGLVAALRE---------------- 291
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
LP+ LT+ Q + I +L PMNR+LQG+VG GKT+V+ LA ++++ +GYQ
Sbjct: 292 ----RLPFELTAGQREVLDVISGELASTRPMNRMLQGEVGSGKTIVSVLAMLQMVDAGYQ 347
Query: 563 AAFMVPTELLATQHYEHL------LKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQ 616
A + PTE+LATQH + L + + D+H ++ALLTGS +Q R +R ++
Sbjct: 348 CALLAPTEVLATQHARSVRDVLGPLAMAGELGGDEHGTRVALLTGSMTPQQKRAVRDEVA 407
Query: 617 TGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNS 676
+G +VIGTH+L+ + VEF L + +VDEQ RFGV QR +K
Sbjct: 408 SGAAGIVIGTHALLQDAVEFDNLGMVVVDEQHRFGVEQRDTLRAK--------------- 452
Query: 677 DGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+P + + PH+L M+ATPIPRT+AL +YGD+ + + +LP GR PI + I
Sbjct: 453 --AP---EGLTPHLLVMTATPIPRTVALTVYGDLETSTLRELPRGRQPITSNTI 501
>gi|399986756|ref|YP_006567105.1| ATP-dependent DNA helicase recG [Mycobacterium smegmatis str. MC2
155]
gi|399231317|gb|AFP38810.1| ATP-dependent DNA helicase recG [Mycobacterium smegmatis str. MC2
155]
Length = 752
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 165/534 (30%), Positives = 251/534 (47%), Gaps = 84/534 (15%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNAQ-----IDLDDGQYFIFIGEIISSR--------GM 272
E+ G T+ LL H+PR Y+D + +DL++G++ FI I ++
Sbjct: 22 EHFGLRTVNDLLRHYPRKYSDGMTVRGEGEALDLEEGEHVTFIDVITEAQPGTMKRPVKT 81
Query: 273 KAGCSFS--FLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLK---KFFRGTRFTSI 327
K G F+ +L V +G T + ID K L L K+FR T +
Sbjct: 82 KTGKQFTPKYLRVKLGDHKPKVTATFFNANWMIDE-LKVGTRLMLSGEVKYFRDTVQLNH 140
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYP 387
P +E SG+ +S ++ +D+ + +PIYP
Sbjct: 141 PAFLVLESP---------SGRTIGTKS-----LKTIAEASGASGEDMLAEFEKEFFPIYP 186
Query: 388 SKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA 447
+ + + + I + L L DP+PK Q+ GL+ A IH + E D A
Sbjct: 187 ASAKMQSWDIYRCIRQVLAVLDPIPDPLPKSFVQQRGLMSEDQALRAIHLAANSTERDRA 246
Query: 448 RKRLIFDEFFYLQLG---RLYQMLEGLG--TQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
R+RL +DE LQ G R Y L G +GL+ R+
Sbjct: 247 RERLTYDEAIGLQWGLVARRYGELAASGPSAPLRVDGLVAALRE---------------- 290
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
LP+ LT+ Q + I +L PMNR+LQG+VG GKT+V+ LA ++++ +GYQ
Sbjct: 291 ----RLPFELTAGQREVLDVISGELASTRPMNRMLQGEVGSGKTIVSVLAMLQMVDAGYQ 346
Query: 563 AAFMVPTELLATQHYEHL------LKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQ 616
A + PTE+LATQH + L + + D+H ++ALLTGS +Q R +R ++
Sbjct: 347 CALLAPTEVLATQHARSVRDVLGPLAMAGELGGDEHGTRVALLTGSMTPQQKRAVRDEVA 406
Query: 617 TGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNS 676
+G +VIGTH+L+ + VEF L + +VDEQ RFGV QR +K
Sbjct: 407 SGAAGIVIGTHALLQDAVEFDNLGMVVVDEQHRFGVEQRDTLRAK--------------- 451
Query: 677 DGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+P + + PH+L M+ATPIPRT+AL +YGD+ + + +LP GR PI + I
Sbjct: 452 --AP---EGLTPHLLVMTATPIPRTVALTVYGDLETSTLRELPRGRQPITSNTI 500
>gi|290967865|ref|ZP_06559416.1| ATP-dependent DNA helicase RecG [Megasphaera genomosp. type_1 str.
28L]
gi|290782105|gb|EFD94682.1| ATP-dependent DNA helicase RecG [Megasphaera genomosp. type_1 str.
28L]
Length = 678
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 171/527 (32%), Positives = 251/527 (47%), Gaps = 96/527 (18%)
Query: 214 VPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN----AQIDLDDGQYFIFIGEIISS 269
+ G+ R L G +T+ LL +FPRTY D + A I L + + G +
Sbjct: 8 IKGIGVRKEKLLNRLGIFTIFDLLQYFPRTYEDRRYISPMATISLPRTEPVLICGYVQRI 67
Query: 270 RGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPF 329
+ + S L+V IAD DSG+ + I+ + PF
Sbjct: 68 QEVHPRRGLSILKV----GIAD------------DSGEAELIWFNQ------------PF 99
Query: 330 LKSIEGKHKVGEFVCVSGKVRAM---RSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
K + H+ + V GK+ A R N+ ++ E + E P+Y
Sbjct: 100 KKKLFTVHQQ---LTVFGKMEAAYGKRQMNNPDIEEGCVTGTALE------------PVY 144
Query: 387 PSKGGLNASLLRDTIARALQALP--ANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
GL LR+ I AL + + E+ + + L++AY IH P ++
Sbjct: 145 GLTEGLRQKELRNFIRDALNYMEEHSGLTEADTEVPFLYPTMSLYEAYRTIHFPDSLEAR 204
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
+ AR++L F E F LQLG L + EK +K + A G L + +
Sbjct: 205 EKARRQLAFQELFDLQLGL------ALRRRGEK-------KKAGIKCAPNGG---LLQAV 248
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
++ LP+ LT Q +A +I D++ VPM RL+QGDVG GKT VA LA +++ +GYQ A
Sbjct: 249 VKNLPFLLTQGQTNAFLDIQSDMESEVPMQRLVQGDVGSGKTAVAALALAKIVENGYQGA 308
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
M PTE+LATQH E L +L + K ALLTG K+ + + +++ G I +VI
Sbjct: 309 LMAPTEILATQHAEELARLFQGI-----PIKTALLTGRIGAKERQRVLQEIADGSIQVVI 363
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+L+ E V+F+ L L + DEQ RFGV QR K
Sbjct: 364 GTHALLQEDVQFAHLGLVVTDEQHRFGVKQRAALQEK----------------------- 400
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
APH L M+ATPIPRTLAL++YGD+ ++ I +LPPGR P+KTY ++
Sbjct: 401 GRAPHGLFMTATPIPRTLALSVYGDLDVSSIRELPPGRKPVKTYAVK 447
>gi|154509012|ref|ZP_02044654.1| hypothetical protein ACTODO_01529 [Actinomyces odontolyticus ATCC
17982]
gi|153798646|gb|EDN81066.1| putative ATP-dependent DNA helicase RecG [Actinomyces odontolyticus
ATCC 17982]
Length = 715
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 161/523 (30%), Positives = 238/523 (45%), Gaps = 67/523 (12%)
Query: 217 LSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGC 276
L K+ LE G T+ LL PR Y G + ++ G
Sbjct: 15 LPKKTAKALEGAGVATVGDLLLVAPRRY----------------YHWGRLTPLSSLREGE 58
Query: 277 SFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGK 336
+ L + G + ++SG V ++ + FF ++ P IE
Sbjct: 59 DVTILAEVAGAHLVANRSSSG---VRLEVALTDGVQFLSATFFAKNQYKLAP----IERL 111
Query: 337 HKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASL 396
G+ +GKV A R ++ + + + ED R RP PIYP+ G L +
Sbjct: 112 LTPGQSFLFAGKVGAYRGK--LQLTHPSFEGVGGED--IERIASRPIPIYPATGSLASWA 167
Query: 397 LRDTIARALQALPANF--DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFD 454
+ I L L DPVP ++ + G + +HQP+ ++ ARK L F
Sbjct: 168 IARAIGMVLDHLDDAHVPDPVPADVRERAGFASHAECLRALHQPETDEDYQQARKALAFA 227
Query: 455 EFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTS 514
E F LQ+G L G +D + L ++ +LP+ LT
Sbjct: 228 EAFVLQVG-LAAQRRGARAAAALASPID---------------APLCERFRSSLPFELTD 271
Query: 515 SQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLAT 574
SQ A+++I DL VPM RLLQGDVG GKTVVA A ++V+ +G+Q AF+ PTE+LA
Sbjct: 272 SQREAVAQIGADLAGEVPMQRLLQGDVGSGKTVVALSALLQVVAAGHQGAFVAPTEVLAE 331
Query: 575 QHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKV 634
QH L LL+ + D P + LLTGST R I+ + + +V GTH+L E V
Sbjct: 332 QHAASLRALLEPLGAD--DPDVRLLTGSTTPAARREIQSAMNAAEPLIVAGTHALFQESV 389
Query: 635 EFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMS 694
F+ L L +VDEQ RFGV QR G+ +D + A H L M+
Sbjct: 390 RFADLALVVVDEQHRFGVEQRAALR------------------GAREDGR--AVHELVMT 429
Query: 695 ATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGY 737
ATPIPRT+A+ ++GD+ T+++ +P GR P+ TY+ + +
Sbjct: 430 ATPIPRTIAMTVFGDLDDTRMSGMPSGRTPVATYLADSANAAW 472
>gi|189345929|ref|YP_001942458.1| ATP-dependent DNA helicase RecG [Chlorobium limicola DSM 245]
gi|189340076|gb|ACD89479.1| ATP-dependent DNA helicase RecG [Chlorobium limicola DSM 245]
Length = 706
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 163/541 (30%), Positives = 253/541 (46%), Gaps = 88/541 (16%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFIGEII 267
++ + G+ + LE G T L +FPR Y D + + +L G+ +G ++
Sbjct: 6 SLTTLKGVGPKRATILEQAGIATPENLFDYFPRRYLDRRTIRRIGELRAGEAVTVVGTVL 65
Query: 268 SSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+R +V++ E T +F+G R+
Sbjct: 66 QARLEGTQPGRMRFKVVLADGTGSIELT----------------------WFKGVRY--- 100
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYN----IDVLKDED---DLSLRAKG 380
F S+ G+ + V+GKV + ++ V ++++ D L G
Sbjct: 101 -FASSV----APGDALAVNGKVGVFGRQMQMQHPDFEHLSRTSVHENQEGGSDYELFHTG 155
Query: 381 RPYPIYP-----SKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMG 434
R P+YP +GGL++ LR IA A + P D + I +E+GLL L +AY
Sbjct: 156 RIIPLYPVSAAMKQGGLHSRQLRTIIAGAFERFPPGRDENLTPGIIREYGLLPLAEAYRE 215
Query: 435 IHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYM 494
+H P ++ + AR R+ + E FY QL L+ + K L++ +A
Sbjct: 216 MHFPSSPEKLEEARTRMKWTELFYTQL--LFAL---------KHAHLERNH----SAPCF 260
Query: 495 EGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACM 554
+T++ LP++LT +Q I EI DLK+ PMNRLLQGDVG GKT+VA +
Sbjct: 261 THSGEVTRRFYAGLPFALTDAQKQVIREIYRDLKRARPMNRLLQGDVGSGKTMVAMFSMA 320
Query: 555 EVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKD 614
+G Q+AFM PTE+LA QH+ L + L + D +ALL G K+
Sbjct: 321 LAADNGLQSAFMAPTEILAVQHFLSLKRSLHPLGID-----VALLAGRQRKKEREAALSG 375
Query: 615 LQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMV 674
L G +T+ +GTH++I + V FS L L I+DEQ RFGV+QR
Sbjct: 376 LADGSLTVAVGTHAMIEKGVSFSRLGLVIIDEQHRFGVLQRKALQ--------------- 420
Query: 675 NSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
D+ +PHVL M+ATPIPRTL +A +GD+ ++ I +P GR+PI+T ++ +
Sbjct: 421 --------DKAASPHVLLMTATPIPRTLTMAGFGDLDVSVIDAMPAGRVPIRTQLVSEHS 472
Query: 735 K 735
K
Sbjct: 473 K 473
>gi|406906984|gb|EKD47967.1| hypothetical protein ACD_65C00195G0002 [uncultured bacterium]
Length = 660
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 175/542 (32%), Positives = 251/542 (46%), Gaps = 91/542 (16%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFI 263
+LD + V +K+ L + G T+ LL ++PRTY D +N +D+ Q +
Sbjct: 1 MLDTKLDKVLRTTKKHISLLSSLGVKTIFDLLSYYPRTYTDERNTVLIVDMKLDQLNVIK 60
Query: 264 GEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTR 323
G + S G K+ +E I+ ++ T V+ + G YL R
Sbjct: 61 GRVKSLHGRKSKNGMHVMEGII------SDCTGSVAVIWFNQG-----YLE--------R 101
Query: 324 FTSIPFLKSIEGKHKV--GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
+ L GK K G V S KV A+ N + R
Sbjct: 102 ILKVGGLYYFSGKLKYDKGRSVFASPKVEAVSEN--------------------VLHTAR 141
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
P+Y GL + +RD I L+ + D +P + +E L L A +H P
Sbjct: 142 IVPVYHETEGLISKWIRDKIYPLLKYADSVPDTLPDWVKKEMDLCELGFAIKNVHFPSSQ 201
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
+ ARKRL F+E F LQL L + + K + +E
Sbjct: 202 KDLVRARKRLAFNEVFSLQLKALK---------------IRRAFKKFSSGFVIERADEAM 246
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
KK + L +SLT +Q ++ E++ D+ VPM RLLQGDVG GKT+VA LA + V+ SGY
Sbjct: 247 KKFVEDLGFSLTKAQRRSLIEMLNDMGGGVPMLRLLQGDVGSGKTIVAALAALNVVKSGY 306
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q AFMVPTE+LA QH+ L +L DK +LTGS K I + G +
Sbjct: 307 QVAFMVPTEVLAKQHFSKLRELF-----DKVSISTEILTGSVGEKDE--IYSKIFGGKVD 359
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+VIGTH+LI +KV+F L LAIVDEQ RFGV QR + +
Sbjct: 360 VVIGTHALIQDKVKFKKLGLAIVDEQHRFGVEQRRKLAN--------------------- 398
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKG--YEN 739
H PH+L+M+ATPIPRTLA+ YGD+ ++ I +LPP R I T ++ +++ Y+
Sbjct: 399 ---HGFPHLLSMTATPIPRTLAMIFYGDLDVSIIDELPPSRKKIITKVVAEDKRTDCYKW 455
Query: 740 VY 741
+Y
Sbjct: 456 IY 457
>gi|147669719|ref|YP_001214537.1| ATP-dependent DNA helicase RecG [Dehalococcoides sp. BAV1]
gi|146270667|gb|ABQ17659.1| ATP-dependent DNA helicase RecG [Dehalococcoides sp. BAV1]
Length = 818
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 168/567 (29%), Positives = 261/567 (46%), Gaps = 92/567 (16%)
Query: 187 ESSTSSEVGSLPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYAD 246
++ + S+ + P + P LD +S V G+S + G T+R LL++FP + D
Sbjct: 100 KAKSPSKTPAKPKADTRLPALDGDVSLVKGISAATAPKFHKLGVNTVRDLLYYFPNRHLD 159
Query: 247 LQNAQ--IDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNID 304
+ L+ G I + S+ + + G TE GD D
Sbjct: 160 YSRLKKISQLEAGPEQTIIANVWQSK----------VNFMSGRR--STEAVLGD-----D 202
Query: 305 SGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYN 364
+G + ++ + R K V +SG+V + +E E+
Sbjct: 203 TGNMRAVWFNNPYMVRNL---------------KPNARVVLSGRVSIFQGRPVFESPEW- 246
Query: 365 IDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEF 423
+ L DE DL GR P+YP GL+ LR + + N D +P E +
Sbjct: 247 -EELPDEADLI--HTGRLVPVYPLTAGLHQRSLRRLMKNFIDISSPNISDFMPAETLKRT 303
Query: 424 GLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDK 483
LL L +A H P + + AR RL FDE F LQLG +L E+ G
Sbjct: 304 RLLPLSEAIRQAHFPDDEELKNAARNRLAFDELFILQLG----VLAKKKRWHEQAGRALN 359
Query: 484 YRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGC 543
P ++ + + LP+ LT +Q +++I D+ + VPM+RLLQG+VG
Sbjct: 360 VNIPDID------------RFVSKLPFKLTDAQTKCLADIKADISKGVPMSRLLQGEVGS 407
Query: 544 GKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNM-------------EED 590
GKT+VA ++ +G Q AFM PTE+LA QH++ + +L ++ E
Sbjct: 408 GKTIVAVISLFTAASNGLQGAFMAPTEILAEQHFKSVTRLFASIARVSTLLDGIYTFEGL 467
Query: 591 KHKP-KIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQR 649
+P K+ALL Q ++++ ++ G++ + IGTH+LI +++ F +L LA++DEQ R
Sbjct: 468 LDRPLKVALLISDMKGSQKDILKEKIKKGEVDIAIGTHALIQKEIRFKSLGLAVIDEQHR 527
Query: 650 FGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGD 709
FGV QR SK + PH+L M+ATPIPRTLAL LYGD
Sbjct: 528 FGVEQRSALRSK-----------------------GLNPHILIMTATPIPRTLALTLYGD 564
Query: 710 MSLTQITDLPPGRIPIKTYIIEGNEKG 736
+ L+ I +LPPGR IKT ++ ++
Sbjct: 565 LDLSVIDELPPGRQSIKTRWLKPEQRN 591
>gi|373457571|ref|ZP_09549338.1| ATP-dependent DNA helicase RecG [Caldithrix abyssi DSM 13497]
gi|371719235|gb|EHO41006.1| ATP-dependent DNA helicase RecG [Caldithrix abyssi DSM 13497]
Length = 697
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 166/519 (31%), Positives = 246/519 (47%), Gaps = 102/519 (19%)
Query: 225 LENCGFYTLRKLLHHFPRTYADLQNAQIDLD---DGQYFIFIGEIISSRGMKAGCSFSFL 281
L+ G TL L++ FPR Y D + +DL+ Q +G+I
Sbjct: 24 LQRQGIATLEDLINFFPRKYVDRSHI-VDLNLLQPDQEVTVVGKI--------------- 67
Query: 282 EVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHL---KKFFRGTRFTSIPFLKSIEGKHK 338
E V I G+++ +Y+ + K F I + K+ + K
Sbjct: 68 -----------------EAVGIRHGRRRFLYVVISDGKGILEAVWFNGIEYFKN---QFK 107
Query: 339 VGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYP-----SKGGLN 393
VGE+V SGKV+ R ++M D L + + ++ G+ YP + GLN
Sbjct: 108 VGEWVSFSGKVQFYRG---FQMTHPEFDRLGEGELDNMLNTGKILAFYPGTEAFKRVGLN 164
Query: 394 ASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLI 452
+ R + + N + +P ++ + LL AY +H P+ + A R
Sbjct: 165 SYTFRKIFYFLFKNMTVNVQEYLPPKVMGQRQLLPRDRAYYQMHLPEDGKILEKAIYRFK 224
Query: 453 FDEFFYLQL----GRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRAL 508
++EFF LQL R + + +G F K+ S +KL L
Sbjct: 225 YEEFFNLQLMLALQRAHLKSKPVGISFPKK-------------------SERLEKLYYRL 265
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
P+ +T +Q + EI D+++P PMNRLLQGDVG GKT+VA +A + + +GYQAA MVP
Sbjct: 266 PFKMTEAQKRVVREIRKDMREPTPMNRLLQGDVGAGKTLVALMAMLIALDNGYQAALMVP 325
Query: 569 TELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHS 628
TE+LA QHY +L ++L+ ++ + I LLTGST VK+ R I + L +G ++IGTH+
Sbjct: 326 TEILAEQHYFNLTRMLEGLDVE-----INLLTGSTGVKERRRINETLGSGAPQIIIGTHA 380
Query: 629 LIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAP 688
LI + E L L I+DEQ RFGV+QR + K P
Sbjct: 381 LIYNEAEMPNLGLIIIDEQHRFGVMQRAKLIEK-----------------------GRQP 417
Query: 689 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
VL M+ATPIPRTLAL YG + ++ I +LPP R PI T
Sbjct: 418 DVLVMTATPIPRTLALTAYGSLDVSIIDELPPNRKPITT 456
>gi|406909637|gb|EKD49847.1| hypothetical protein ACD_63C00029G0001 [uncultured bacterium]
Length = 685
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 158/537 (29%), Positives = 255/537 (47%), Gaps = 94/537 (17%)
Query: 217 LSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFIGEIISSRGMKA 274
+ K+ L G +R LL HFP + DL ++ ++ G++IS +
Sbjct: 2 VGKKTEQHLAKLGILKVRDLLFHFPSYHQDLSKITKIQNVKPNNFYTIKGKLISIVNKRT 61
Query: 275 GCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIE 334
F I+ TE DE ++ K ++ + PFLK
Sbjct: 62 PRKF----------ISITEALLTDETASL-----KIVWFNQ------------PFLKK-- 92
Query: 335 GKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNA 394
++G+ + SGK A N ++ ++ K E L GR P+Y + G L
Sbjct: 93 -SLRMGQELLASGK--AQIGMNGLQLTSPTYEIFKKE----LTHTGRIVPVYSTTGKLTP 145
Query: 395 SLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFD 454
LLR I + L + D +PK++ + G L A IH P + + A++RL FD
Sbjct: 146 KLLRFLIKKILPKAKSIKDYLPKDLKKRQGFTDLNAALQQIHFPDNEIKLKQAKRRLAFD 205
Query: 455 EFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTS 514
E F++QL L + L +++ P++ L + +R+LP+ LT+
Sbjct: 206 ELFFIQLSALSSKRK-----------LQEHKAPQIKFD-----KKLVQSFVRSLPFELTN 249
Query: 515 SQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLAT 574
+Q A E++ ++++ PMNRLL+GDVG GKT+VA + +EV + Q+ M PTE+LA
Sbjct: 250 AQRRAAWEVLKNIEKSTPMNRLLEGDVGSGKTLVAAINMLEVAKAKMQSVIMSPTEVLAV 309
Query: 575 QHYEHLLKLLD----------------NMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
QH+++L KL N K K KI + + P + + + L+ G
Sbjct: 310 QHFKNLSKLFTKQGIIIGLLTNNYSKANKNFSKEKNKIKTMEDNLPKTKFKHL---LEKG 366
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
I L++GTH+LI + + F+ L L ++DEQ RFGV QR D
Sbjct: 367 KIDLIVGTHALIQKNIRFANLALVVIDEQHRFGVNQRKSL-----------------KDK 409
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
+PK + PH L+M+ATPIPRTLA++LYGD+ ++ + ++P R PIKTY++ ++
Sbjct: 410 TPK----LIPHFLSMTATPIPRTLAISLYGDLDISILDEMPKNRKPIKTYLVPSTKR 462
>gi|333897208|ref|YP_004471082.1| ATP-dependent DNA helicase RecG [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333112473|gb|AEF17410.1| ATP-dependent DNA helicase RecG [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 682
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 174/537 (32%), Positives = 261/537 (48%), Gaps = 83/537 (15%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L K I V G+ + L+ G T++ L ++PR Y D + I +D + IGE
Sbjct: 3 LSKPIQYVKGVGPKRALLLKRIGIETVKDALEYYPREYEDREKI-IPID----MLKIGEK 57
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
+ + AG + + I G I G SG + ++ +
Sbjct: 58 QTFKAYIAGKAREYR--IKGLIITKIPVKDG-------SGALELVWYNQ----------- 97
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
P++K+ K+GE ++G++ + E + D L+L A GR PIY
Sbjct: 98 -PYVKN---NFKLGEEYIINGRISYKYGQVYVEN-----PTMDKSDVLNLNA-GRIVPIY 147
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPVPKE-ITQEFGLLCLFDAYMGIHQPKHIDEAD 445
GL+ +LR+ I L+ + + E E+ LL + A IH P+ + +
Sbjct: 148 KLTDGLSQKILRNIIYSLLKEYINEIEEIFDEDFLTEYNLLGIRKAIKNIHFPESPEMLE 207
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLL 505
A+ RLIF EFF LQLG L + +++ + K++ L+ + L
Sbjct: 208 RAKYRLIFQEFFILQLG-----LNLIKNRYDIDKSGIKFKHVDLS------------EFL 250
Query: 506 RALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAF 565
L ++ T +Q A++EI+ D+ MNRLLQGDVG GKT++A A + +GYQA+
Sbjct: 251 NNLKFTFTKAQDKALNEILNDMYSGKVMNRLLQGDVGSGKTIIAAAAMYVAVKNGYQASI 310
Query: 566 MVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIG 625
+ PTE+LA QHY L +L DK K LLTGS K+ +I + ++ G+I +++G
Sbjct: 311 LTPTEILAKQHYLSLKELY-----DKLGVKTELLTGSISNKRKNLIIEKVKNGEIDVLVG 365
Query: 626 THSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQH 685
THSLI + V+F L LAI DEQ RFGV QR F +K T
Sbjct: 366 THSLIEDNVQFKNLGLAITDEQHRFGVRQRAMFKNKGNQT-------------------- 405
Query: 686 MAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEG--NEKGYENV 740
+VL M+ATPIPRTLAL LYGD+ ++ I +LPPGR ++TY I G E+ Y+ V
Sbjct: 406 ---NVLVMTATPIPRTLALMLYGDLDISIIDELPPGRKKVETYAISGALRERAYKFV 459
>gi|251797726|ref|YP_003012457.1| ATP-dependent DNA helicase RecG [Paenibacillus sp. JDR-2]
gi|247545352|gb|ACT02371.1| ATP-dependent DNA helicase RecG [Paenibacillus sp. JDR-2]
Length = 684
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 133/354 (37%), Positives = 192/354 (54%), Gaps = 46/354 (12%)
Query: 380 GRPYPIYPSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQP 438
G P+Y GG+ + +R TI +AL + + V P E+ + GL+ DA IH P
Sbjct: 142 GTLQPVYSVGGGITQAWMRKTIKQALLQYGSMIEEVLPHELVERHGLMARRDAVQRIHDP 201
Query: 439 KHIDEADLARKRLIFDEFFYLQLG-RLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGW 497
+ + E AR+R++++E F QL + Y+ L T+ +G++ + +N + +
Sbjct: 202 EEVKEGLEARRRMVYEELFLFQLKLQAYRSL----TRKRGDGIVHQ-----VNGETIRNF 252
Query: 498 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
++ LP+ LT Q ++EI+ D++QP MNRLLQGDVG GKTVVA +A I
Sbjct: 253 AA-------TLPFELTDGQKKVVNEIMSDMRQPAAMNRLLQGDVGSGKTVVAAIALYCTI 305
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
+G+Q A MVPTE+LA QH L KL + ++ALLTGS K+ R + LQ
Sbjct: 306 KAGHQGALMVPTEILAEQHLRSLQKLFADT-----GIEVALLTGSLTEKKRRDVLAGLQM 360
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
G I +++GTH+LI + V F +L L + DEQ RFGV QR K
Sbjct: 361 GMIDILVGTHALIQDDVFFRSLGLVVTDEQHRFGVNQRSILRRK---------------- 404
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
M P VL M+ATPIPRTLA+ +GDM ++ I + P GR PIKTY ++
Sbjct: 405 -------GMNPDVLTMTATPIPRTLAITAFGDMDVSTIKERPHGRKPIKTYWVK 451
>gi|227904224|ref|ZP_04022029.1| ATP-dependent DNA helicase [Lactobacillus acidophilus ATCC 4796]
gi|227867872|gb|EEJ75293.1| ATP-dependent DNA helicase [Lactobacillus acidophilus ATCC 4796]
Length = 682
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 169/520 (32%), Positives = 256/520 (49%), Gaps = 93/520 (17%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGEIISS 269
++ + G+ + L + G Y++ LL +FP Y +LQ +D + DGQ + G I+++
Sbjct: 14 VTDLKGVGTKTAADLGSLGIYSIYDLLFYFPFRYDELQTLPLDQIMDGQKVVLKG-IVAT 72
Query: 270 RGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPF 329
+ + + I EV+ ++ F + P+
Sbjct: 73 EPFVSRFGYKKSRLSFKMRI-------DHEVIMVN-------------------FFNQPW 106
Query: 330 LKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSK 389
LK+ K ++G+ + + GK R + + + K+ D PIYP
Sbjct: 107 LKN---KIEIGQEIAIYGKYNVARQS----LSAFKFVAAKEND-------SGMAPIYPVN 152
Query: 390 GGLNASLLRDTIARALQA-LPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLAR 448
+ L I A++ L D VP++I QE+ LL + +H PK+ ++A++ +
Sbjct: 153 RHIKQKKLVSLIDLAIEEFLDQVNDIVPEKIRQEYHLLNDREIITKMHHPKNSNDAEIGK 212
Query: 449 KRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRAL 508
+ IF EFF +L +L + + G Q G KY ++ ++LTK +L
Sbjct: 213 RSAIFREFFIFEL-QLALLTKKDGNQL---GYAKKYD--------LKEVANLTK----SL 256
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
P+ L+ Q ++EI DL M RLLQGDVG GKTVVA A I +GYQAA MVP
Sbjct: 257 PFELSDDQKHVVNEIFADLHSSNQMRRLLQGDVGSGKTVVAVYAIFAAITAGYQAALMVP 316
Query: 569 TELLATQHYEHLLKLLDNMEEDKHKP---KIALLTGSTPVKQSRMIRKDLQTGDITLVIG 625
TE+LATQH++ + +LL +P ++ALLT +T + R I ++L G I +VIG
Sbjct: 317 TEILATQHFKKIDELL--------RPFGIRVALLTSNTKTLERREIYRELTDGTINVVIG 368
Query: 626 THSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQH 685
TH+LI + V F L L I+DEQ RFGV QR A++N +P
Sbjct: 369 THALIQKNVIFKKLGLVIIDEQHRFGVGQR---------------QALINKGDNPD---- 409
Query: 686 MAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
VLAM+ATPIPRTLAL +YGDM+L++I LP GR PI
Sbjct: 410 ----VLAMTATPIPRTLALTVYGDMTLSEIHHLPSGRKPI 445
>gi|418461471|ref|ZP_13032543.1| ATP-dependent DNA helicase RecG [Saccharomonospora azurea SZMC
14600]
gi|359738341|gb|EHK87229.1| ATP-dependent DNA helicase RecG [Saccharomonospora azurea SZMC
14600]
Length = 717
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 161/518 (31%), Positives = 240/518 (46%), Gaps = 80/518 (15%)
Query: 230 FYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEI 289
+T+ LL H+PR YA GE+ G++ G + L +
Sbjct: 26 LHTVGDLLRHYPRRYAQR----------------GELTDIAGLELGEHVTVLARVESTTK 69
Query: 290 ADTETTSGDEV-VNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGK 348
+ G + V I GQ++ L F G + E + + G +GK
Sbjct: 70 RPMRSRKGSILDVTITDGQRR-----LSCAFFGNQTWR-------ERELRPGRTGLFAGK 117
Query: 349 VRAMR-----SNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIAR 403
V A R +N YE+ E + D L DD + P+YP+ GL + + + +
Sbjct: 118 VTAFRRSLQLANPEYELIESD-DGLSSVDDF----LAQIIPVYPAAQGLPSWRISKAVHQ 172
Query: 404 ALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGR 463
L+ L DP+P+ + ++ L+ LFDA IH+P+ E AR RL +DE +QL
Sbjct: 173 TLEMLDHEPDPLPETLRRDHDLITLFDALHAIHRPRSDAELAAARTRLKWDEALAVQLV- 231
Query: 464 LYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEI 523
L + + G P + E + + LP+ LT Q +
Sbjct: 232 -------LAQRRQSSGARPAPACPPKSGGIAEAFDA-------RLPFELTDGQREVGEAL 277
Query: 524 IWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKL 583
DL PMNRLLQG+VG GKT+VA A ++V+ +G QAA + PTE+LA QH L +L
Sbjct: 278 RADLAGEHPMNRLLQGEVGSGKTIVALRAMLQVVDAGRQAALLAPTEVLAAQHARSLREL 337
Query: 584 LDNMEEDKH------KPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFS 637
L ++ + ++ LLTGS P KQ + D +G +V+GTH+L+ E V F+
Sbjct: 338 LGDLAKAGELGGSECATRVTLLTGSMPAKQRKQALLDAASGAAGIVVGTHALLGEHVSFA 397
Query: 638 ALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATP 697
L +VDEQ RFGV QR ++ DD ++PHVL M+ATP
Sbjct: 398 DLAFVVVDEQHRFGVEQRDALRAR------------------AGDD--VSPHVLVMTATP 437
Query: 698 IPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
IPRT+A+ +YGD+ + + LP GR PI T ++ EK
Sbjct: 438 IPRTVAMTVYGDLETSSLRQLPSGRSPIATTVVPAAEK 475
>gi|291538889|emb|CBL12000.1| ATP-dependent DNA helicase RecG [Roseburia intestinalis XB6B4]
Length = 685
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 168/523 (32%), Positives = 254/523 (48%), Gaps = 84/523 (16%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADL-QNAQID-LDDGQYFIFIGEIIS 268
I V ++ L+H++ G YT+ +L H+PRTY Q +D + DG+ +G I
Sbjct: 10 IKGVGAKTEELFHKI---GVYTVGDILLHYPRTYIQYPQAKHVDEVLDGEQAAVLGRITR 66
Query: 269 SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIP 328
+ ++ + + +E + E+V ++R +P
Sbjct: 67 TPVVRKVRTMQITVTTI------SEMGASLELV----------------WYR------MP 98
Query: 329 FLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPS 388
++K+ KVG GKV + N M + + +E S+ P+Y
Sbjct: 99 YMKN---NLKVGSTYIFYGKVN--KKNGRLVMEQAAM--FTEEQYASMEQVF--LPVYTL 149
Query: 389 KGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLAR 448
GL+ +L+ T+ AL D +P I +++GL A IH P+ ++ AR
Sbjct: 150 TNGLSNNLVTKTVRAALGDEHLFMDYLPHAIREKYGLCEYNYAIRQIHFPEDMETLITAR 209
Query: 449 KRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRAL 508
+RL+FDEFF L L Q++KE K+ K + + E T +L+ L
Sbjct: 210 RRLVFDEFF----------LFILSMQYQKE----KHVKEKNEFVFAE--DDFTDELIEQL 253
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
PY LT++Q A++++ D++ M RL+QGDVG GKT+VAFLA + +GYQ+A M P
Sbjct: 254 PYELTNAQKKALADVKRDMRSETVMQRLIQGDVGSGKTIVAFLAMADTAHNGYQSAIMAP 313
Query: 569 TELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHS 628
TE+LA QHYE + + H P I LLTGS KQ R + L+ ++IGTH+
Sbjct: 314 TEVLARQHYESYQSMCEQF--GLHIP-IVLLTGSMTAKQKRRAYEALEVYSNAMIIGTHA 370
Query: 629 LIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAP 688
LI EK + L L I DEQ RFGV QR F K G+ P
Sbjct: 371 LIQEKAIYQNLALVITDEQHRFGVRQRETFAGK----------------GTE-------P 407
Query: 689 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
HVL MSATPIPRTLA+ +YGD+ ++ I ++P R+PIK +++
Sbjct: 408 HVLVMSATPIPRTLAIIIYGDLDISVIDEVPAKRLPIKNCVVD 450
>gi|227878872|ref|ZP_03996777.1| ATP-dependent DNA helicase [Lactobacillus crispatus JV-V01]
gi|256849792|ref|ZP_05555223.1| ATP-dependent DNA [Lactobacillus crispatus MV-1A-US]
gi|262046963|ref|ZP_06019923.1| ATP-dependent DNA helicase RecG [Lactobacillus crispatus MV-3A-US]
gi|227861506|gb|EEJ69120.1| ATP-dependent DNA helicase [Lactobacillus crispatus JV-V01]
gi|256713281|gb|EEU28271.1| ATP-dependent DNA [Lactobacillus crispatus MV-1A-US]
gi|260572945|gb|EEX29505.1| ATP-dependent DNA helicase RecG [Lactobacillus crispatus MV-3A-US]
Length = 678
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 170/517 (32%), Positives = 254/517 (49%), Gaps = 87/517 (16%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGEIISS 269
++ + G+ + L + G Y++ LL +FP Y +LQ +D + DGQ + G I+++
Sbjct: 10 VTDLKGVGTKTTAALGSLGIYSIYDLLFYFPFRYDELQTLPLDQIMDGQKVMLKG-IVAT 68
Query: 270 RGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPF 329
+ + + I +V+ ++ F + P+
Sbjct: 69 EAFVSRFGYKKTRLSFKMRI-------DHDVIMVN-------------------FFNQPW 102
Query: 330 LKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSK 389
LK+ K ++G+ V + GK R + + + V E+D + PIYP
Sbjct: 103 LKN---KIEIGQEVAIYGKYNVARQS----LTAFKF-VAAKENDSGMA------PIYPVN 148
Query: 390 GGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLAR 448
+ L D I A+ D VP+++ QE+ LL +H PK+ EA+LA+
Sbjct: 149 RHVKQKKLVDLINVAIDDFIDQVQDIVPEKLRQEYRLLKDQVIIEKMHHPKNSHEAELAK 208
Query: 449 KRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRAL 508
+ IF EFF +L +L + G Q G KY + +L ++L
Sbjct: 209 RSAIFREFFIFEL-QLALLTRNDGKQM---GYAKKYDLTEI------------AQLTKSL 252
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
P+ L+ Q ++EI D+ M RLLQGDVG GKTVVA A I +GYQAA MVP
Sbjct: 253 PFELSDDQKHVVNEIFADMHSDGQMRRLLQGDVGSGKTVVAVYAIFAAITAGYQAALMVP 312
Query: 569 TELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHS 628
TE+LATQH++ + +LL + ++ALLTG+T + R I ++L G I +VIGTH+
Sbjct: 313 TEILATQHFKKIDELLRPL-----GVRVALLTGNTKTLERREIYRELTDGTINVVIGTHA 367
Query: 629 LIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAP 688
LI + V F L L I+DEQ RFGV QR A++N K DQ P
Sbjct: 368 LIQDSVIFKKLGLVIIDEQHRFGVGQR---------------QALIN-----KGDQ---P 404
Query: 689 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
+LAM+ATPIPRTLAL +YGDM++++I LP GR PI
Sbjct: 405 DILAMTATPIPRTLALTVYGDMTVSEIHHLPAGRKPI 441
>gi|295425211|ref|ZP_06817914.1| DNA helicase RecG [Lactobacillus amylolyticus DSM 11664]
gi|295064987|gb|EFG55892.1| DNA helicase RecG [Lactobacillus amylolyticus DSM 11664]
Length = 679
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 175/520 (33%), Positives = 251/520 (48%), Gaps = 92/520 (17%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGEIISS 269
++ + G+ + L + G Y++ LL +FP Y +LQ +D + DGQ + G
Sbjct: 10 VTDIKGVGTKTAANLGSLGIYSIYDLLFYFPFRYDELQTLPLDQIMDGQKVLLKG----- 64
Query: 270 RGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKK---IYLHLKKFFRGTRFTS 326
IV E T G KK L + F +
Sbjct: 65 --------------IVATEPFLTRF-----------GYKKSRLSFKLRIDHDIVMVNFFN 99
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
P+LK+ K ++G+ V V GK R + + + V + E+D + PIY
Sbjct: 100 QPWLKN---KVEIGKEVAVYGKYNVARQS----LSAFKF-VAEKENDSGMA------PIY 145
Query: 387 PSKGGLNASLLRDTIARAL-QALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
P + L I A+ L D +P ++ +++ LL + +H PK+ +EA
Sbjct: 146 PVNKHVKQKKLVGLINFAIDNYLDQVKDIIPAKVREKYRLLTDQEIISKMHHPKNGNEAQ 205
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLL 505
LA++ IF EFF ++QM L T E + +K L A KL
Sbjct: 206 LAKRSAIFREFF------IFQMQLALLTSQSNEHNTGEAKKYDLKA---------IAKLT 250
Query: 506 RALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAF 565
+LP+ L++ Q A++EI DL Q M RLLQGDVG GKTVVA A I +GYQAA
Sbjct: 251 ASLPFELSADQKQAVNEIYADLFQKRQMRRLLQGDVGSGKTVVAVYAIFAAITAGYQAAL 310
Query: 566 MVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIG 625
MVPTE+LATQH+ + +LL + ++ALLTG+T + R I ++L G I +VIG
Sbjct: 311 MVPTEILATQHFNKIDQLLRPL-----GVRVALLTGNTKTLERREIYRELTDGTINVVIG 365
Query: 626 THSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQH 685
TH+LI + V F L L I+DEQ RFGV QR A++N +
Sbjct: 366 THALIQKNVIFKNLGLVIIDEQHRFGVGQR---------------QALIN--------KG 402
Query: 686 MAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
P +LAM+ATPIPRTLAL +YG+MS+++I LP GR PI
Sbjct: 403 ECPDILAMTATPIPRTLALTVYGEMSVSEIRHLPAGRKPI 442
>gi|452911413|ref|ZP_21960081.1| ATP-dependent DNA helicase RecG [Kocuria palustris PEL]
gi|452833341|gb|EME36154.1| ATP-dependent DNA helicase RecG [Kocuria palustris PEL]
Length = 746
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 180/547 (32%), Positives = 267/547 (48%), Gaps = 88/547 (16%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTY---ADLQN-AQIDLDDGQYFIF 262
LD+ ++ V G S + ++ G T+ +LL HFPR +L + +++ LD ++
Sbjct: 6 LDRPLAEVLGASSAKTFE-KHLGLVTIGQLLEHFPRRLVPRGELTSFSELRLD--EHATL 62
Query: 263 IGEI--ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFR 320
+ E+ +S+R M++ S S EV+ I D + SG +++ +G + FF
Sbjct: 63 VAEVLRVSTRRMRS-RSGSITEVV----ITDRSSDSGPDLLAESTGATMTL-----SFFN 112
Query: 321 GTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMR-----SNNHYEMREYNIDVLKDEDDLS 375
+T+ L S G SGKV R +N HY + + DV + S
Sbjct: 113 A--WTASRDLTS-------GTHALFSGKVSQYRGELTMANPHYAPLDPDDDVDAADALDS 163
Query: 376 LRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFD------PVPKEITQEFGLLCLF 429
GRP P+YP+ A L D IA+A+Q A D P+P E+ +E L
Sbjct: 164 ---AGRPVPVYPAV----AKLTSDRIAQAVQLCLAAVDWSTVPDPLPLEVAREHRYSDLA 216
Query: 430 DAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRL 489
AY +H+P E A+ R E LQ L + + + R P L
Sbjct: 217 SAYQAMHRPADEQEWHRAKARFRHTEALVLQAALLRRRQA-----------VAQRRAPEL 265
Query: 490 NAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVA 549
A EG L + R L + LT+SQ +I DL Q PMNRLLQGDVG GKTVVA
Sbjct: 266 TGA--EG--VLQEGFARRLGFELTASQQEVGQQIAADLGQVHPMNRLLQGDVGSGKTVVA 321
Query: 550 FLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLL------DNMEEDKHKPKIALLTGST 603
A ++ + SG QAA + PTE+LA QH+ +++ L +E D ++ LLTGS
Sbjct: 322 LRAMLQAVDSGAQAALLAPTEVLAAQHHASIVRALGPLGAAGTLEGDPQGTRVVLLTGSM 381
Query: 604 PVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLY 663
P + ++ TG+ +VIGTH+L++E V+F L L +VDEQ RFGV QR R
Sbjct: 382 PAAARKQALLEIVTGEAGIVIGTHALLSETVQFLRLGLVVVDEQHRFGVQQRDRLR---- 437
Query: 664 YTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRI 723
+G V PH+L M+ATPIPRT+A+ ++GD+ ++ + LP GR
Sbjct: 438 ----ETGADEV-------------PHLLVMTATPIPRTVAMTVFGDLDVSVLEGLPAGRQ 480
Query: 724 PIKTYII 730
PI T+++
Sbjct: 481 PIDTHVV 487
>gi|58337584|ref|YP_194169.1| ATP-dependent DNA helicase RecG [Lactobacillus acidophilus NCFM]
gi|58254901|gb|AAV43138.1| ATP-dependent DNA helicase [Lactobacillus acidophilus NCFM]
Length = 678
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 169/520 (32%), Positives = 256/520 (49%), Gaps = 93/520 (17%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGEIISS 269
++ + G+ + L + G Y++ LL +FP Y +LQ +D + DGQ + G I+++
Sbjct: 10 VTDLKGVGTKTAADLGSLGIYSIYDLLFYFPFRYDELQTLPLDQIMDGQKVVLKG-IVAT 68
Query: 270 RGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPF 329
+ + + I EV+ ++ F + P+
Sbjct: 69 EPFVSRFGYKKSRLSFKMRI-------DHEVIMVN-------------------FFNQPW 102
Query: 330 LKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSK 389
LK+ K ++G+ + + GK R + + + K+ D PIYP
Sbjct: 103 LKN---KIEIGQEIAIYGKYNVARQS----LSAFKFVAAKEND-------SGMAPIYPVN 148
Query: 390 GGLNASLLRDTIARALQA-LPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLAR 448
+ L I A++ L D VP++I QE+ LL + +H PK+ ++A++ +
Sbjct: 149 RHIKQKKLVSLIDLAIEEFLDQVNDIVPEKIRQEYHLLNDREIITKMHHPKNSNDAEIGK 208
Query: 449 KRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRAL 508
+ IF EFF +L +L + + G Q G KY ++ ++LTK +L
Sbjct: 209 RSAIFREFFIFEL-QLALLTKKDGNQL---GYAKKYD--------LKEVANLTK----SL 252
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
P+ L+ Q ++EI DL M RLLQGDVG GKTVVA A I +GYQAA MVP
Sbjct: 253 PFELSDDQKHVVNEIFADLHSSNQMRRLLQGDVGSGKTVVAVYAIFAAITAGYQAALMVP 312
Query: 569 TELLATQHYEHLLKLLDNMEEDKHKP---KIALLTGSTPVKQSRMIRKDLQTGDITLVIG 625
TE+LATQH++ + +LL +P ++ALLT +T + R I ++L G I +VIG
Sbjct: 313 TEILATQHFKKIDELL--------RPFGIRVALLTSNTKTLERREIYRELTDGTINVVIG 364
Query: 626 THSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQH 685
TH+LI + V F L L I+DEQ RFGV QR A++N +P
Sbjct: 365 THALIQKNVIFKKLGLVIIDEQHRFGVGQR---------------QALINKGDNPD---- 405
Query: 686 MAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
VLAM+ATPIPRTLAL +YGDM+L++I LP GR PI
Sbjct: 406 ----VLAMTATPIPRTLALTVYGDMTLSEIHHLPSGRKPI 441
>gi|294102390|ref|YP_003554248.1| ATP-dependent DNA helicase RecG [Aminobacterium colombiense DSM
12261]
gi|293617370|gb|ADE57524.1| ATP-dependent DNA helicase RecG [Aminobacterium colombiense DSM
12261]
Length = 695
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 160/534 (29%), Positives = 248/534 (46%), Gaps = 75/534 (14%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGE 265
L + + + G+ QL G T L+ FPR Y D +
Sbjct: 6 LHQQSVRYIKGVGAVREKQLNRLGIQTAEDLILFFPRRYEDRRG---------------- 49
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVN--IDSGQKKKIYLHLKKFFRGTR 323
+ S ++ + S L +V E T + G ++ + GQ F R
Sbjct: 50 LTSLAKLRPETTVSLLVRVVAVEKRQT-SRKGFVIIQGLMTDGQD---------FLRAVW 99
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY 383
F K +E G+ V + G + H ++ +++ E+ S + G+
Sbjct: 100 FNR----KGLERLLTPGKEVALYGPIDW--KYGHLQITNPEFEII--EEGESPESIGQVV 151
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
PIYP GL+ R I L P FDP+P + + L+D+ + +H P+ +
Sbjct: 152 PIYPLTAGLHQRWFRKLIRFCLDNSPFIFDPLPDFLRLKHAFPPLYDSILEMHYPQGRES 211
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
AR RL + E F LQ G + + E+ L +K A + L ++
Sbjct: 212 WKKARDRLAYQELFVLQTGMALR-------RGERSRLAEK-------APILPESGRLKER 257
Query: 504 LLRAL-PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
L+ + PY LT +Q EI D+ +PM+RLLQGDVG GKT VA LA ++ + GYQ
Sbjct: 258 FLKEIFPYPLTEAQKKVSLEISQDMALNIPMHRLLQGDVGSGKTAVAVLALLQAVEGGYQ 317
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
AFM PTE+LA QHY L L+ + + LL GS + + + + TG+ +
Sbjct: 318 GAFMAPTEILAQQHYYRLHSFLEPL-----GVSVVLLIGSLKNRARELTLQKISTGEAHV 372
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
V+GTH+L ++ V FS L A++DEQ RFGV+Q+ +K
Sbjct: 373 VVGTHALFSDPVTFSNLGFAVIDEQHRFGVLQKNALRAK-------------------GA 413
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKG 736
++ APH+L M+ATPIPRTL L++YGD+S++ I ++PPGR PI+T ++ E+G
Sbjct: 414 NEGQAPHILVMTATPIPRTLTLSVYGDLSVSVIDEMPPGRTPIQTRWLKKKEEG 467
>gi|420161380|ref|ZP_14668145.1| ATP-dependent DNA helicase RecG [Weissella koreensis KCTC 3621]
gi|420161517|ref|ZP_14668281.1| ATP-dependent DNA helicase RecG [Weissella koreensis KCTC 3621]
gi|394745055|gb|EJF33951.1| ATP-dependent DNA helicase RecG [Weissella koreensis KCTC 3621]
gi|394745357|gb|EJF34241.1| ATP-dependent DNA helicase RecG [Weissella koreensis KCTC 3621]
Length = 676
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 169/534 (31%), Positives = 250/534 (46%), Gaps = 96/534 (17%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L+ ++ + G+ + L + G +T+ LL HFP Y+DL ++ + G GE
Sbjct: 3 LNDSVAELSGVGPKRLDGLHHLGIFTIEDLLSHFPLRYSDLAT-KLPSEVGS-----GEK 56
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
++ +G+ S + V++ +K +I L
Sbjct: 57 VTFKGL----------------------VSSEPVLSRYGYRKTRINFRL---LVENENIV 91
Query: 327 IPFLKS--IEGKHKVGEFVCVSGKVRAMRSNNHYEMREYN---IDVLKDEDDLSLRAKGR 381
+ F ++ K K+GE V + G YE R I +L + L+A
Sbjct: 92 VTFFNQPWVQEKLKLGEEVAIYGT---------YEQRRQTLMGIKILAKDSMDELQA--- 139
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKH 440
YP+ + L+ I +AL F D +P+ I + LL + G+H PK+
Sbjct: 140 ---TYPASKEVTQKTLKALIEQALGKYKELFVDLIPEPIRFRYRLLPRMEMLFGMHVPKN 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
EA AR+ F+EFF Q+ RL Q+L K + +E ++
Sbjct: 197 AIEAHAARRTASFEEFFLFQM-RL-QLL--------------KMTDQSYHGRSIEFNNNK 240
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
K ++ LP+ LT++Q ++EI+ DL++P MNRLLQGDVG GKTVVA LA + +G
Sbjct: 241 LKAFIQTLPFELTAAQKKVVNEIVADLRRPKHMNRLLQGDVGSGKTVVAALAMYAAVSAG 300
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
QAA M PTE+LA QH + L + D + +I +LTGS R I DL GDI
Sbjct: 301 MQAALMAPTEILAQQHAKTLSQFF-----DVNDVRIEILTGSMKAGPRRQILADLANGDI 355
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
++IGTH+LI + F L LA++DEQ RFGV QR +
Sbjct: 356 DILIGTHALIQTDIAFHNLGLAVIDEQHRFGVKQRAKLR--------------------- 394
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
+ M P +LAM+ATPIPRTLA+ YG+M ++ I LP GR PIKT + NE
Sbjct: 395 --EIGMNPDILAMTATPIPRTLAITAYGEMDVSVIDQLPSGRKPIKTQWLRNNE 446
>gi|225016666|ref|ZP_03705858.1| hypothetical protein CLOSTMETH_00575 [Clostridium methylpentosum
DSM 5476]
gi|224950630|gb|EEG31839.1| hypothetical protein CLOSTMETH_00575 [Clostridium methylpentosum
DSM 5476]
Length = 694
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 164/527 (31%), Positives = 251/527 (47%), Gaps = 87/527 (16%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGE 265
L ++ + + G+ ++ G T+ +LLH FPR+Y D+ N I + IGE
Sbjct: 21 LFERSVQELHGVGQKRAQLYGKLGIATIGELLHLFPRSYIDVTNP-IPVPQ----TVIGE 75
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFT 325
+ R ++ + + G + T G + I + Y LK
Sbjct: 76 PAAVR-VRVYKKLAEQRIRKGLSLFKVYATDGAGNLAITIFNNRYAYDGLK--------- 125
Query: 326 SIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNID-VLKDEDDLSLRAKGRPYP 384
+ E + GKV ++ MRE N +L+ DL+++ P
Sbjct: 126 -------------LEEEYLLYGKV-----GGNFVMREMNSPLILEAGGDLTMQ------P 161
Query: 385 IYPSKGGLNASLLRDTIARALQALPAN-FDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
+YP GL + ++ AL + ++P+PKEI +++ L A IH P
Sbjct: 162 VYPLTEGLTSKMVITNQKEALSMVTGGAYEPLPKEILEQYQLCSFNFALQNIHFPVDPFS 221
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
LARKRL+F+E QLG L ++ + + + +
Sbjct: 222 LGLARKRLVFEELLTWQLG------------------LALVKQKNSTSTDVTLSDTSIEP 263
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
L+ALP++LTS+Q I E + D VPMNRL+QGDVG GKT+VA C + +GYQ+
Sbjct: 264 FLQALPFTLTSAQQRVIGECLADASSTVPMNRLVQGDVGSGKTMVAAALCYAMAKNGYQS 323
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A M PTE+LA+QH++ L +LL + + LLTGS KQ ++++ ++ ++ +V
Sbjct: 324 AMMAPTEILASQHFKTLSQLLSPL-----GLRTCLLTGSLTKKQKELLKEQIRAKEVDVV 378
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GTH+L+ + EF++L L I DEQ RFGV QR + K
Sbjct: 379 VGTHALVQDSTEFASLGLVITDEQHRFGVNQRQKLVDK---------------------G 417
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+H PHVL MSATPIPRTLAL LYGD+ ++ I +LP GR I T+ I
Sbjct: 418 EH--PHVLVMSATPIPRTLALILYGDLDISIIDELPKGRQKIDTFFI 462
>gi|341821062|emb|CCC57396.1| ATP-dependent DNA helicase RecG [Weissella thailandensis fsh4-2]
Length = 678
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 172/538 (31%), Positives = 247/538 (45%), Gaps = 99/538 (18%)
Query: 205 PLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADL-QNAQIDLDDGQYFIFI 263
P L I+ + G+ + L G +T+ LL ++PR Y DL Q + DG+ F
Sbjct: 2 PSLMDSIAELSGVGPKREQALNKLGVFTIDDLLTYYPRRYNDLAQKLPSETLDGEKVTFK 61
Query: 264 G-----EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKF 318
G ++S G K +F T + + I
Sbjct: 62 GLVTSPPVVSRMGFKK-TRLTF------------RLTVSHDTIQIS-------------- 94
Query: 319 FRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRA 378
F + P+LK VGE V V G S H + I +E++L
Sbjct: 95 -----FFNQPWLKK---NIVVGEEVAVYGTY----SKTHQSLSAIKIMPKNNENELE--- 139
Query: 379 KGRPYPIYPSKGGLNASLLRDTIARALQALP--ANFDPVPKEITQEFGLLCLFDAYMGIH 436
IYPS + A ++D + +AL + VP +I + + LL D G+H
Sbjct: 140 -----AIYPSSKEIKAGTIKDLVFQALGKYGDLLTQEIVPADIRRRYRLLNYHDTIFGMH 194
Query: 437 QPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG 496
P A+ AR+ F EFF Q+ RL Q+++ + Q +G + +L A
Sbjct: 195 APDDEIMAEKARRTASFMEFFVFQM-RL-QVIKQMDRQ--NQGRSVDFDNQKLKA----- 245
Query: 497 WSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEV 556
++ LP+ LT++Q ++EI+ D+++PV MNRLLQGDVG GKTVVA LA
Sbjct: 246 -------FIKTLPFELTTAQKKVVNEIVRDMRRPVHMNRLLQGDVGSGKTVVAALAMYAT 298
Query: 557 IGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQ 616
I +G QA M PTE+LA QH + + ++ ++ +LTG+T R I DL
Sbjct: 299 ITAGMQATLMAPTEILAQQHARTIGNYF-----NPNEVRVEILTGATKAAARRQILSDLA 353
Query: 617 TGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNS 676
GDI ++IGTHSLI + F L LA++DEQ RFGV QR VN
Sbjct: 354 DGDIDILIGTHSLIQPDIAFHNLGLAVIDEQHRFGVQQRATLRK-----------VGVN- 401
Query: 677 DGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
P +LAM+ATPIPRTLA+ YG+M ++ I LP GR PIKTY + N+
Sbjct: 402 -----------PDILAMTATPIPRTLAITAYGEMDVSIIDQLPAGRKPIKTYWLRHNK 448
>gi|291536243|emb|CBL09355.1| ATP-dependent DNA helicase RecG [Roseburia intestinalis M50/1]
Length = 685
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 168/523 (32%), Positives = 254/523 (48%), Gaps = 84/523 (16%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADL-QNAQID-LDDGQYFIFIGEIIS 268
I V ++ L+H++ G YT+ +L H+PRTY Q +D + DG+ +G I
Sbjct: 10 IKGVGAKTEELFHKI---GVYTVGDILLHYPRTYIQYPQAKHVDEVLDGEQAAVLGRITR 66
Query: 269 SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIP 328
+ ++ + + +E + E+V ++R +P
Sbjct: 67 TPVVRKLRTMQITVTTI------SEMGASLELV----------------WYR------MP 98
Query: 329 FLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPS 388
++K+ KVG GKV + N M + + +E S+ P+Y
Sbjct: 99 YMKN---NLKVGSTYIFYGKVN--KKNGRLVMEQAAM--FTEEQYASMEQVF--LPVYTL 149
Query: 389 KGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLAR 448
GL+ +L+ T+ AL D +P I +++GL A IH P+ ++ AR
Sbjct: 150 TNGLSNNLVTKTVRAALGDERLFMDYLPHAIREKYGLCEYNYAIRQIHFPEDMETLITAR 209
Query: 449 KRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRAL 508
+RL+FDEFF L L Q++KE K+ K + + E T +L+ L
Sbjct: 210 RRLVFDEFF----------LFILSMQYQKE----KHVKEKNEFVFAE--DDFTDELIEQL 253
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
PY LT++Q A++++ D++ M RL+QGDVG GKT+VAFLA + +GYQ+A M P
Sbjct: 254 PYELTNAQKKALADVKRDMRSETVMQRLIQGDVGSGKTIVAFLAMADTAHNGYQSAIMAP 313
Query: 569 TELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHS 628
TE+LA QHYE + + H P I LLTGS KQ R + L+ ++IGTH+
Sbjct: 314 TEVLARQHYESYQSMCEQF--GLHIP-IVLLTGSMTAKQKRRAYEALEVYSNAMIIGTHA 370
Query: 629 LIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAP 688
LI EK + L L I DEQ RFGV QR F K G+ P
Sbjct: 371 LIQEKAIYQNLALVITDEQHRFGVRQRETFAGK----------------GTE-------P 407
Query: 689 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
HVL MSATPIPRTLA+ +YGD+ ++ I ++P R+PIK +++
Sbjct: 408 HVLVMSATPIPRTLAIIIYGDLDISVIDEVPAKRLPIKNCVVD 450
>gi|227495861|ref|ZP_03926172.1| DNA helicase RecG [Actinomyces urogenitalis DSM 15434]
gi|226834618|gb|EEH67001.1| DNA helicase RecG [Actinomyces urogenitalis DSM 15434]
Length = 758
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 166/542 (30%), Positives = 247/542 (45%), Gaps = 73/542 (13%)
Query: 217 LSKRLYHQLENCGFYTLRKLLHHFPR---TYADLQNAQIDLDDGQYFIFIGEIISS--RG 271
L KR QL G T LL PR T+ DL + L +G+ +++ S R
Sbjct: 5 LGKRTAEQLGRQGVETAGDLLRLLPRRYDTWGDLTDLS-SLVEGEQVTVQAQVMRSAARR 63
Query: 272 MKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLK 331
+ G + +E +V D K + F + +
Sbjct: 64 ARGGRPPALMEALV-----------------TDGASKMDVVF----------FGAAGLMA 96
Query: 332 SIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAK--GRPYPIYPSK 389
+ G V +SGKV +R + H ++ VL DE D + RA+ RP PIYP+
Sbjct: 97 HYAEQFSPGTTVLLSGKV-GIR-HGHRQLASPRFQVL-DELDEAERAELLARPMPIYPAT 153
Query: 390 GGLNASLLRDTIARALQALPANF--DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA 447
L + + + L L +P+P E+ Q L+ A+ +H P+ ++ A
Sbjct: 154 ESLPSWRVAKAVRTVLDQLTEQDVPEPLPPEVRQAHDLVGALTAWRWVHTPEDAEQWRAA 213
Query: 448 RKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRA 507
RKRL ++E F LQ + + + E PR A SL L +
Sbjct: 214 RKRLRYEEAFVLQSALVQR-------RAAHEATHAAVAWPRPGA------GSLRASLDAS 260
Query: 508 LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMV 567
LPY+LT Q E+ L VPM LLQGDVG GKT+VA A ++V+G G QAA +
Sbjct: 261 LPYTLTRGQERVGRELEEALASTVPMQTLLQGDVGSGKTLVALRAMLQVVGGGGQAALLA 320
Query: 568 PTELLATQHYEHLLKLLDNMEE------DKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
PTE+LA QH L +LL + ++ LLTGSTP Q R I L G+
Sbjct: 321 PTEVLAAQHRSSLEQLLGPLARAGMLGGASQATQVLLLTGSTPTPQRREILARLAGGESA 380
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+V+GTH+L+++ V+ L L +VDEQ RFGV QR + + P
Sbjct: 381 IVVGTHALLSDTVQIPFLGLVVVDEQHRFGVAQRDALRER-------------GNVRDPD 427
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGY-ENV 740
Q PH+L M+ATPIPRT+A+ ++GD+ + +LP GR P+ T+++ G+ E +
Sbjct: 428 TGQLRTPHLLVMTATPIPRTIAMTVFGDLDTAVLDELPAGRSPVATHLVPWERTGWVEGI 487
Query: 741 YK 742
++
Sbjct: 488 WQ 489
>gi|222055696|ref|YP_002538058.1| ATP-dependent DNA helicase RecG [Geobacter daltonii FRC-32]
gi|221564985|gb|ACM20957.1| ATP-dependent DNA helicase RecG [Geobacter daltonii FRC-32]
Length = 770
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 260/545 (47%), Gaps = 103/545 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFIG 264
L + + G+ +L QL G + L P Y D ++ L G + +F
Sbjct: 68 LQTPMQFIKGVGPKLAEQLAKKGISVVEDALFLLPHRYEDRRSLSKVSKLRPGAHEVFYA 127
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
E++S FLEV T+GDE +I LK F RF
Sbjct: 128 EVLSFEAKSTKGGKRFLEV-----------TAGDESGSIT----------LKWF----RF 162
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLS-LRAK---- 379
+ F+K +VG +G+V ++ E+ ++ L + DL+ L A+
Sbjct: 163 NPV-FMKK---TWRVGRKGVFTGEV--VQYGFQKEIHHPEVEWLDEGADLAALTARDPLN 216
Query: 380 -GRPYPIYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQ 437
GR P+YP GL+ LR + + + + +P + + L+ L +A H
Sbjct: 217 FGRILPVYPLTEGLHQKTLRKVMKEVIDRFVIDVENHLPLGVMERHHLMPLDEALRETHF 276
Query: 438 PKHIDEADLAR---------KRLIFDEFFYLQLG----RLYQMLEGLGTQFEKEGLLDKY 484
P H +ADLAR K FDE F+L+LG R +LE G F+ + KY
Sbjct: 277 PGH--DADLARLNNGATVAHKTFSFDELFFLELGLALKRSGIVLEQ-GIAFQ---VTHKY 330
Query: 485 RKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCG 544
T++LL+ LP+ LT +Q +SEI D+ P PM+RL+QGDVGCG
Sbjct: 331 ----------------TRELLKLLPFHLTDAQRRVLSEIKNDMMLPHPMHRLVQGDVGCG 374
Query: 545 KTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTP 604
KT+VA +A + + + YQ A M PTE+LA QH+ + + D + K++LLT
Sbjct: 375 KTLVALMAALVAVENDYQVAIMAPTEILAEQHFLTIHRWCDAL-----GIKVSLLTSGMK 429
Query: 605 VKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYY 664
K + +++ G ++VIGTH++I EKVEF+ L L I+DEQ RFGV+QRG K
Sbjct: 430 GKAKSAVLEEIAAGRTSIVIGTHAVIQEKVEFNRLGLGIIDEQHRFGVLQRGILKRK--- 486
Query: 665 TSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIP 724
+ P +L M+ATPIPRTLA+ ++GD+SL+ I +LPPGR P
Sbjct: 487 --------------------GINPDILVMTATPIPRTLAMTVFGDLSLSVIDELPPGRTP 526
Query: 725 IKTYI 729
++T +
Sbjct: 527 VETRV 531
>gi|319899972|ref|YP_004159700.1| ATP-dependent DNA helicase RecG [Bacteroides helcogenes P 36-108]
gi|319415003|gb|ADV42114.1| ATP-dependent DNA helicase RecG [Bacteroides helcogenes P 36-108]
Length = 698
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 174/535 (32%), Positives = 256/535 (47%), Gaps = 107/535 (20%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNA-QIDLDDGQ--YFIFIGEIISSRGMKAGCSFSFLE 282
+ G Y+L LL++FP Y D I DG Y GEI+
Sbjct: 25 KELGIYSLHDLLYYFPYKYVDRSRIYHIQEIDGTMPYIQLKGEILHFE------------ 72
Query: 283 VIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIE---GKHKV 339
+ G+++++ H F GT + + + I+ G++KV
Sbjct: 73 -------------------TVGEGRQRRLIAH---FSDGTGMVDLVWFQGIKYLLGQYKV 110
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG-RPYPIYPSK---GGLNAS 395
+ V GK A N + +ID + +L L G +PY +K LN+
Sbjct: 111 HQDYVVFGKPTAF--NGRINIAHPDIDPV---SELKLSTMGMQPYYNTTAKMKRSSLNSH 165
Query: 396 LLRDTIARALQALPANFDPVPKE----ITQEFGLLCLFDAYMGIHQPKHIDEADLARKRL 451
+ ++ +Q L +P+P+ I E L+ L DA IH P + + A+ RL
Sbjct: 166 AIEKMMSTVIQQLR---EPIPETLSPAILNEHHLMSLTDALTNIHFPVNSELLRKAQYRL 222
Query: 452 IFDEFFYLQLGRLY----QMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRA 507
F+E FY+QL L + + G FEK G + N+ Y R
Sbjct: 223 KFEELFYVQLNILRYAKDRQRKYRGYIFEKVGEI-------FNSFYS-----------RN 264
Query: 508 LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMV 567
LP+ LT++Q + EI D+ MNRLLQGDVG GKT+VA ++ + + +G+QA M
Sbjct: 265 LPFELTNAQKRVLKEIRRDVGSGKQMNRLLQGDVGSGKTLVALMSMLIALDNGFQACMMA 324
Query: 568 PTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTH 627
PTE+LA QHYE + +LL +M+ ++ LLTGS K+ I DL TGD+ ++IGTH
Sbjct: 325 PTEILANQHYETICELLYDMD-----VRVELLTGSVKGKRRETILADLLTGDVHILIGTH 379
Query: 628 SLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMA 687
++I +KV F++L L ++DEQ RFGV QR R +K
Sbjct: 380 AVIEDKVNFASLGLVVIDEQHRFGVAQRARLWTK----------------------SIQP 417
Query: 688 PHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYK 742
PHVL M+ATPIPRTLA+ LYGD+ ++ I +LPPGR PI T N K E++Y+
Sbjct: 418 PHVLVMTATPIPRTLAMTLYGDLDVSVIDELPPGRKPIATIHQFDNRK--ESLYR 470
>gi|386814232|ref|ZP_10101456.1| ATP-dependent DNA helicase RecG [planctomycete KSU-1]
gi|386403729|dbj|GAB64337.1| ATP-dependent DNA helicase RecG [planctomycete KSU-1]
Length = 699
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 169/541 (31%), Positives = 261/541 (48%), Gaps = 98/541 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYAD------LQNAQIDLDDGQYF 260
L++ I + G+ + LE G T+R +L++FPR Y D + A+I G
Sbjct: 16 LNQTIQYLKGVGPKRGEILERLGIRTIRDVLYYFPRDYKDHTKIQKISKAKI----GAKI 71
Query: 261 IFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFR 320
G+++ + +EV VG T ++
Sbjct: 72 TIQGKVLGVHARISRNRKHIVEVFVGDGTGTIAATWFNQ--------------------- 110
Query: 321 GTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG 380
PFL K + + V + GKV A + + ++ +++++ED +S +G
Sbjct: 111 -------PFLTD---KFHIEDTVFLHGKVGAYK---YLQLLSPEYEIVQNED-IS-EKEG 155
Query: 381 RPYPIYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPK 439
PIYP ++ + R + A++ + + VPKE+ ++ L+ + DA IH PK
Sbjct: 156 SIIPIYPLTEHMSQTHFRKIVEEAVRHFTGHVEEIVPKELMKKNRLIPIQDALRDIHFPK 215
Query: 440 HIDEADLARKRLIFDEFFYLQLG---RLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG 496
+ A+ +LI+DE F L++ R + + E G F+ +D +
Sbjct: 216 TFEHLKHAKSKLIYDELFILEIAMALRRWSIKEETGISFKAGPNVDTH------------ 263
Query: 497 WSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEV 556
+ +P++LT++Q I EI D++ PMNRLLQGDVG GKTVVA A +
Sbjct: 264 -------IRNLIPFTLTNAQERVIHEIKNDMRSSKPMNRLLQGDVGSGKTVVAIYAILIA 316
Query: 557 IGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQ 616
I +GYQAAFM PTE+LA QH+ L K L +I LLTG + + + + ++
Sbjct: 317 IANGYQAAFMAPTEILAEQHFHTLKKYLMCSH-----VRIRLLTGESHARYKKSDLEQVK 371
Query: 617 TGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNS 676
TG + LVIGTH+LI E V+F L L ++DEQ +FGVVQR + K
Sbjct: 372 TGQVDLVIGTHALIEETVQFRKLGLVVIDEQHKFGVVQRLKLKEK--------------- 416
Query: 677 DGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT-YIIEGNEK 735
GS P VL M+ATPIPRTL+L L+GD+ ++ + ++PPGR PIKT +I G EK
Sbjct: 417 -GS-------CPDVLIMTATPIPRTLSLTLFGDLDISILDEIPPGRSPIKTLWIPNGKEK 468
Query: 736 G 736
Sbjct: 469 N 469
>gi|339634037|ref|YP_004725678.1| ATP-dependent DNA helicase RecG [Weissella koreensis KACC 15510]
gi|338853833|gb|AEJ22999.1| ATP-dependent DNA helicase RecG [Weissella koreensis KACC 15510]
Length = 676
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 169/534 (31%), Positives = 250/534 (46%), Gaps = 96/534 (17%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L+ ++ + G+ + L + G +T+ LL HFP Y+DL ++ + G GE
Sbjct: 3 LNDSVAELSGVGPKRLDGLHHLGIFTIEDLLSHFPLRYSDLAT-KLPSEVGS-----GEK 56
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
++ +G+ S + V++ +K +I L
Sbjct: 57 VTFKGL----------------------VSSEPVLSRYGYRKTRINFRL---LVENENIV 91
Query: 327 IPFLKS--IEGKHKVGEFVCVSGKVRAMRSNNHYEMREYN---IDVLKDEDDLSLRAKGR 381
+ F ++ K K+GE V + G YE R I +L + L+A
Sbjct: 92 VTFFNQPWVQEKLKLGEEVAIYGT---------YEQRRQTLMGIKILAKDSMDELQA--- 139
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKH 440
YP+ + L+ I +AL F D +P+ I + LL + G+H PK+
Sbjct: 140 ---TYPASKEVTQKTLKALIEQALGKYKELFVDLIPEPIRFRYRLLPRMEMLFGVHVPKN 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
EA AR+ F+EFF Q+ RL Q+L K + +E ++
Sbjct: 197 AIEAHAARRTASFEEFFLFQM-RL-QLL--------------KMTDQSYHGRSIEFNNNK 240
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
K ++ LP+ LT++Q ++EI+ DL++P MNRLLQGDVG GKTVVA LA + +G
Sbjct: 241 LKAFIQTLPFELTAAQKKVVNEIVADLRRPKHMNRLLQGDVGSGKTVVAALAMYAAVSAG 300
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
QAA M PTE+LA QH + L + D + +I +LTGS R I DL GDI
Sbjct: 301 MQAALMAPTEILAQQHAKTLSQFF-----DVNDVRIEILTGSMKAGPRRQILADLVNGDI 355
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
++IGTH+LI + F L LA++DEQ RFGV QR +
Sbjct: 356 DILIGTHALIQTDIAFHNLGLAVIDEQHRFGVKQRAKLR--------------------- 394
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
+ M P +LAM+ATPIPRTLA+ YG+M ++ I LP GR PIKT + NE
Sbjct: 395 --EIGMNPDILAMTATPIPRTLAITAYGEMDVSVIDQLPSGRKPIKTQWLRNNE 446
>gi|339500563|ref|YP_004698598.1| ATP-dependent DNA helicase RecG [Spirochaeta caldaria DSM 7334]
gi|338834912|gb|AEJ20090.1| ATP-dependent DNA helicase RecG [Spirochaeta caldaria DSM 7334]
Length = 704
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 140/370 (37%), Positives = 202/370 (54%), Gaps = 48/370 (12%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHID 442
PIYP GL+ +LR + +ALQ + D +P + Q+ LL A IH PK+ D
Sbjct: 147 PIYPLTAGLSQKILRRLVYQALQLYGKSLEDELPGSVLQQQALLDKTKALGAIHFPKNKD 206
Query: 443 EADLARKRLIFDEFFYLQ--LGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG---- 496
E + A++R+ ++E FYL+ +GR E++ L + P +
Sbjct: 207 ELEAAQRRIKYEELFYLEVLIGR---------RALERQNTLRRTPAPAQGQTQAQSQELE 257
Query: 497 --WSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACM 554
S L K+L LP+ LT Q++AI+EI D+ P M RLLQGDVG GKT+V+F+A +
Sbjct: 258 DKLSPLQKRLAERLPFELTKGQINAITEINRDMSGPHSMARLLQGDVGSGKTLVSFMAAL 317
Query: 555 EVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKD 614
+ G Q A + PTELLA QH E+ K+L+ + +A LTG+ + K
Sbjct: 318 RALEEGGQTALLAPTELLARQHAENAAKILEPL-----GVSVAFLTGNVKAAGRSALLKA 372
Query: 615 LQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMV 674
L G+I LVIGTH+L + +++ LRL I+DEQ RFGV+QR +K
Sbjct: 373 LAAGNIHLVIGTHALFSAGLQYHKLRLVIIDEQHRFGVLQRSAILAK------------- 419
Query: 675 NSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII-EGN 733
D+ P +L MSATPIPRTLAL ++GD+ ++ I+DLPPGR P+KT++ + N
Sbjct: 420 ------GDN----PDLLMMSATPIPRTLALTVFGDLDVSVISDLPPGRKPVKTHLARQSN 469
Query: 734 E-KGYENVYK 742
E K Y+ V K
Sbjct: 470 EQKVYDFVRK 479
>gi|338812751|ref|ZP_08624909.1| ATP-dependent DNA helicase RecG [Acetonema longum DSM 6540]
gi|337275267|gb|EGO63746.1| ATP-dependent DNA helicase RecG [Acetonema longum DSM 6540]
Length = 683
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 165/534 (30%), Positives = 246/534 (46%), Gaps = 83/534 (15%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFIGEIIS 268
+ + G+ QL T+ +L HFP Y D Q+ L+ + F +++
Sbjct: 9 VQSIKGIGPMREKQLAKLNILTVEDMLEHFPFRYEDRTAFQLISALEPEKKAAFTAQVVQ 68
Query: 269 SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIP 328
+ ++ G T V SG + I+ + P
Sbjct: 69 VQNLRQGGK-----------------TLTKATVRDSSGSAELIWFNQ------------P 99
Query: 329 FLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPS 388
+ K + +V + + GKV+ N +V D + G PIYP+
Sbjct: 100 YKKQ---QLQVDSKLSIYGKVQIRTGIKQI----VNPEVEPDAETSDSLHTGTIVPIYPT 152
Query: 389 KGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLAR 448
GL LR I +A++ + +P+ I +++ L+ A H+P + A
Sbjct: 153 TDGLAQRTLRGLIYQAIEECDCFPETLPEAIIRQWDLMSRDRAIRSAHRPSDENTVKAAL 212
Query: 449 KRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRAL 508
KRL F+++++LQ G L L G + + G+ K + ++ SL L
Sbjct: 213 KRLAFEKYYFLQCGLL---LSRAGYRRQHAGI-----KHAPDGRWVNQLESL-------L 257
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
P+ LT+ Q +A+ EI D++ PM RLLQGDVG GKTVVA +A + I +GYQ A M P
Sbjct: 258 PFRLTNGQAAALDEIKQDMESEWPMQRLLQGDVGSGKTVVAAIALAKTIENGYQGALMAP 317
Query: 569 TELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHS 628
TE+LA+QHY L + +D + K+ LLTG + I ++ G I LVIGTH+
Sbjct: 318 TEILASQHYTFLTECVDPL-----GIKVQLLTGRMSTTTKKSIIDAIKNGQIQLVIGTHA 372
Query: 629 LIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAP 688
LI E +EF L L + DEQ RFGV QR A++ + G AP
Sbjct: 373 LIQENIEFQRLGLVVTDEQHRFGVKQR----------------ALLAAKGQ-------AP 409
Query: 689 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYK 742
VL M+ATPIPRT+AL Y D+ ++ I +LPPGR IKTY++ N E VYK
Sbjct: 410 DVLVMTATPIPRTMALVFYADLDISTIRELPPGRQVIKTYLV--NPDMRERVYK 461
>gi|385817889|ref|YP_005854279.1| ATP-dependent DNA helicase RecG [Lactobacillus amylovorus GRL1118]
gi|327183827|gb|AEA32274.1| ATP-dependent DNA helicase RecG [Lactobacillus amylovorus GRL1118]
Length = 678
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 170/517 (32%), Positives = 259/517 (50%), Gaps = 87/517 (16%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGEIISS 269
++ + G+ + L + G Y++ LL +FP Y +LQ +D + DGQ + G I+++
Sbjct: 10 VTDLKGVGTKTAADLGSLGIYSIYDLLFYFPFRYDELQTLPLDQIMDGQKVMLKG-IVAT 68
Query: 270 RGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPF 329
+G + + I ++V ++ F + P+
Sbjct: 69 EPFVSGFGYKKSRLSFKIRI-------DHDIVMVN-------------------FFNQPW 102
Query: 330 LKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSK 389
LKS K ++G+ V + GK R + + + V E+D + PIYP
Sbjct: 103 LKS---KIEIGQEVAIYGKYNVARQS----LSAFKF-VAAKENDSGMA------PIYPVN 148
Query: 390 GGLNASLLRDTIARALQA-LPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLAR 448
+ L + I A+ + L D VPKEI +++ LL + +H PK+ +A+LA+
Sbjct: 149 RHVKQKKLINLINLAIDSFLDQVQDIVPKEIMEKYRLLHDQEIIQKMHHPKNGHDAELAK 208
Query: 449 KRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRAL 508
+ IF EFF +L +L + G Q +G KY ++ ++LTK +L
Sbjct: 209 RSAIFREFFIFEL-QLALLANHDGKQ---QGYPKKYD--------LKEIANLTK----SL 252
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
P+ L+ Q ++EI D+ M RLLQGDVG GKT+VA A I +GYQAA MVP
Sbjct: 253 PFELSDDQKKVVNEIFADMHSDGQMRRLLQGDVGSGKTIVAVYAIFAAISAGYQAALMVP 312
Query: 569 TELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHS 628
TE+LATQH++ + +LL + ++ALLTG+T + R I +L G I +VIGTH+
Sbjct: 313 TEILATQHFKKIDELLRPL-----GVRVALLTGNTKTLERREIYCELTDGTINVVIGTHA 367
Query: 629 LIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAP 688
LI + V F L L I+DEQ RFGV QR A++N +P
Sbjct: 368 LIQKNVIFKKLGLVIIDEQHRFGVGQR---------------QALINKGDNPD------- 405
Query: 689 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
+LAM+ATPIPRTLAL +YGDM++++I LP GR PI
Sbjct: 406 -ILAMTATPIPRTLALTVYGDMTVSEIHHLPAGRKPI 441
>gi|187778910|ref|ZP_02995383.1| hypothetical protein CLOSPO_02505 [Clostridium sporogenes ATCC
15579]
gi|187772535|gb|EDU36337.1| ATP-dependent DNA helicase RecG [Clostridium sporogenes ATCC 15579]
Length = 679
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 165/530 (31%), Positives = 253/530 (47%), Gaps = 100/530 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
I+ + G+ + QLE C + + LL +FPR Y + N D
Sbjct: 7 ITTLKGVGPKTKEQLEKCMIFNIMDLLLYFPRDYEFIDNYSKD----------------- 49
Query: 271 GMKAGCSFSFLEVIVGCEIA----DTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
S +VI+ ++ D T +G + I I+ +K G+ F
Sbjct: 50 ------KLSNKKVIIKVQVENIKRDVRTRTGKILTTI-------IFNDGEKAIVGSWFNQ 96
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
P++K+ K+GE + G +R R + N +LK++ + + + P Y
Sbjct: 97 -PYIKNY---FKIGEEYILQGSLREYRGT----LTINNAQILKNKYAEKVEER-KIIPKY 147
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL 446
P KG L +LL + AL + + +P+ + +++ + L + IH+P++ E +
Sbjct: 148 PLKGDLKNNLLIKLVNSALGNIAIG-ENLPRWLIEKYKFISLDKSIRTIHKPENQKELEE 206
Query: 447 ARKRLIFDEF--FYLQLGRLYQML----EGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ +RL F E + L++ L + L EG+ + +E
Sbjct: 207 SIRRLKFQELLAYCLKIASLKEYLKTATEGIAFKVLEE---------------------- 244
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
T ++R+LP+ LT++Q + EI D K+ PMNRLLQGDVG GKT++A + VI +G
Sbjct: 245 TSDIIRSLPFKLTNAQNRVLEEIFKDQKKEKPMNRLLQGDVGSGKTIIALICLFNVIKNG 304
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQ + PTE+LA QHYE LKL + + IALL GS + I++ L+ G+I
Sbjct: 305 YQGVMLAPTEILAIQHYEEALKLFKDFNLN-----IALLVGSVKASLKKEIKEKLKKGEI 359
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
L+IGTH+LI + VEF L + I DEQ RFGV+QR + M+N S
Sbjct: 360 DLIIGTHALIEDDVEFYNLGMVITDEQHRFGVMQRSK---------------MLNKGRS- 403
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
L MSATPIPRTL L+LYGD+ L+ I +LPPGR I TY +
Sbjct: 404 -------IDTLVMSATPIPRTLTLSLYGDLDLSIIDELPPGRKKIDTYYV 446
>gi|325290432|ref|YP_004266613.1| ATP-dependent DNA helicase RecG [Syntrophobotulus glycolicus DSM
8271]
gi|324965833|gb|ADY56612.1| ATP-dependent DNA helicase RecG [Syntrophobotulus glycolicus DSM
8271]
Length = 768
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 169/531 (31%), Positives = 247/531 (46%), Gaps = 98/531 (18%)
Query: 205 PLLDKCISC--VPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYF 260
P D I V G+ + QLEN G T+R+LL H+PR Y +++ +++ +L DG+
Sbjct: 99 PAGDSAIQLQYVKGVGPQRIRQLENLGIRTVRELLQHYPRRY-EIRTSRLINELQDGEIA 157
Query: 261 IFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFR 320
+ G T SG + I G+ K L +++
Sbjct: 158 VVTG-----------------------------TVSGSQ---ISRGRVKVTKLRIEQ--D 183
Query: 321 GTRFTSIPFLKS-IEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAK 379
G+ ++ F ++ I + G V ++GKV+ + ++ K +D R +
Sbjct: 184 GSYIDAVWFNQTHIPRQFPAGSVVSITGKVQWNKKVPEL----LATEIEKGNND---RQR 236
Query: 380 GRPYPIYPSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQP 438
IYP LN+ +R + A + F V P E Q G L +A IH P
Sbjct: 237 TEIVAIYPETARLNSKAIRFIMRNASAQIEEIFPEVFPDEDCQ--GWLKRPEAIREIHFP 294
Query: 439 KHIDEADLARKRLIFDE--FFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG 496
++A +AR+RLI +E FF L + L + G + ++G
Sbjct: 295 SSPEKAKIARERLIIEEILFFQLAIAELRDPVSGNSSPVLQKG----------------- 337
Query: 497 WSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEV 556
L K L L + LT +Q I EI D+ M RL+QGDVG GKT VA A ++
Sbjct: 338 -KELLHKWLHILEFQLTRAQKRVIGEIFRDMATTRGMTRLVQGDVGSGKTAVAMAALLQA 396
Query: 557 IGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQ 616
+GSGYQ A MVPTE+LA QHY L ++ + + ALL GS + I DL+
Sbjct: 397 VGSGYQGAMMVPTEVLALQHYHSLTRVFQPL-----GVRAALLLGSQGKSEREEILVDLE 451
Query: 617 TGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNS 676
G I +++GTH+LI ++V + AL L + DEQ RFGV QR R
Sbjct: 452 QGKIDVIVGTHALIQDQVRYHALGLVVTDEQHRFGVRQRTRLQ----------------- 494
Query: 677 DGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
D+ +PHVL M+ATPIPRTLAL LYGD+ L+ I ++P GR P+ T
Sbjct: 495 ------DKGESPHVLVMTATPIPRTLALTLYGDLQLSVIDEMPAGRKPVMT 539
>gi|345859734|ref|ZP_08812068.1| ATP-dependent DNA helicase RecG [Desulfosporosinus sp. OT]
gi|344327191|gb|EGW38635.1| ATP-dependent DNA helicase RecG [Desulfosporosinus sp. OT]
Length = 839
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 163/513 (31%), Positives = 249/513 (48%), Gaps = 96/513 (18%)
Query: 224 QLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIISSRGMKAGCSFSFLE 282
QLE G + + LL ++PR Y D + I +L DG+ GE+++ + M
Sbjct: 185 QLEKLGIHNVFDLLLYYPRRYEDRRKRLIAELKDGETATIAGEVVAGQVMNGKL------ 238
Query: 283 VIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEF 342
+VV + Q+ ++ F+ T F I LK ++ VG
Sbjct: 239 ----------------KVVKLSIQQQGRL-------FQATWFNQIHILK----QYPVGTQ 271
Query: 343 VCVSGKVRAMRSNNHYEMREYNIDVLKD---EDDLSLRAKGRPYPIYPSKGGLNASLLRD 399
V V+GKVR + D+ K+ + D+ R P+Y L++ ++R+
Sbjct: 272 VVVTGKVRWQQQVPEV----LATDIEKENVSQVDVPDRGLQTILPVYSETARLSSKVIRN 327
Query: 400 TIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFY 458
I L + + F + +P+E QE+ + A+ IH P + AR+RL+++E +
Sbjct: 328 LINSVLDQVDSCFQEIIPQEELQEW--MGRTQAHREIHFPVNYTSLSQARERLVWEEVLF 385
Query: 459 LQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLS 518
LQL + GL ++G++ RL + + G ++ +ALP+ LT++Q
Sbjct: 386 LQLA-----VAGL-----RQGMV------RLESPVLSGGEEQIRRFYKALPFRLTTAQQR 429
Query: 519 AISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYE 578
ISEI DL +P M RL+QGDVG GKT VA A + +GSGYQ A M PTE+LA QH +
Sbjct: 430 VISEIFQDLARPHGMARLVQGDVGSGKTAVAMAALLRAVGSGYQGAMMAPTEILALQHLQ 489
Query: 579 HLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKD----LQTGDITLVIGTHSLIAEKV 634
L K + + L GS Q + +R++ + G +++GTH+LI E V
Sbjct: 490 ALEKAFTPL-----GITVVCLLGS----QGKSVREETLAQIADGRAQVIVGTHALIQETV 540
Query: 635 EFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMS 694
F AL LA+ DEQ RFGV QR +++ G PHVL ++
Sbjct: 541 VFKALGLAVTDEQHRFGVRQR----------------SLLQGKGE-------NPHVLVLT 577
Query: 695 ATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
ATPIPRTLAL LYGD+ L+ + ++P GR PI T
Sbjct: 578 ATPIPRTLALTLYGDLQLSVLNEMPAGRKPIIT 610
>gi|422343148|ref|ZP_16424076.1| ATP-dependent DNA helicase RecG [Selenomonas noxia F0398]
gi|355378455|gb|EHG25635.1| ATP-dependent DNA helicase RecG [Selenomonas noxia F0398]
Length = 688
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 170/537 (31%), Positives = 252/537 (46%), Gaps = 83/537 (15%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L IS V G+ + G T+ LL ++PR Y D Q++ + D
Sbjct: 3 LTDSISKVRGVGVKKSAAFARLGIRTVYDLLTYYPRAYED-QSSITRIAD---------- 51
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTET-----TSGDEVVNIDSGQKKKIYLHLKKFFRG 321
++AG + L VI ++ D +T T ++ +G + ++ + +
Sbjct: 52 -----LRAGIRATVLGVI--QQVTDRQTRRRGFTVLTALIGDGTGYMQAVWFNQR----- 99
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVR-AMRSNNHYEMREYNIDVLKDEDDLSLRAKG 380
FLKS K + G + ++GK A + + L D + G
Sbjct: 100 -------FLKS---KLREGRRILLTGKTDYAYNGGGQLALSQITSFELLGARDHAESLLG 149
Query: 381 RPYPIYPSKGGLNASLLRDTIARAL-QALPANFDPVPKEITQEFGLLCLFDAYMGIHQPK 439
PIY + GL LR + AL Q+ + +P I QE+ L+ DA+ IH PK
Sbjct: 150 -ILPIYAATEGLPQKQLRQMMEYALAQSADKLTETLPPRIRQEYDLIGRADAFRRIHFPK 208
Query: 440 HIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSS 499
+E AR+RL F+E + +Q G L T E+EG+ R N A
Sbjct: 209 REEELRAARRRLAFEELYLIQCGLLALKKR---TAEEQEGIAH-----RPNGA------- 253
Query: 500 LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
L ++L ALP+ LT Q EI D++ P+PM RL+QGDVG GKT VA LA ++ +
Sbjct: 254 LAARVLEALPFELTEDQAKVWGEIARDMESPLPMRRLVQGDVGSGKTAVALLALVKTTEN 313
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
GYQ A M PTE+LA QHY++L LL + ++ L+G K+ I L
Sbjct: 314 GYQGALMAPTEILARQHYDYLQTLLTPL-----GIRVGFLSGRLTKKERAEIDAALAAHT 368
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
+ +++GTH+LI + V F AL L + DEQ RFGV QR K S G+
Sbjct: 369 VDIIVGTHALIQDHVAFDALGLVVTDEQHRFGVAQRTALEKK--------------SGGT 414
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKG 736
P VL M+ATPIPRT+ L +YGD+ +++I LPPGR PI+T++ + +G
Sbjct: 415 PD--------VLVMTATPIPRTMTLTVYGDLDVSRIEHLPPGRRPIRTFLRDETARG 463
>gi|366164343|ref|ZP_09464098.1| ATP-dependent DNA helicase RecG [Acetivibrio cellulolyticus CD2]
Length = 691
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 172/528 (32%), Positives = 255/528 (48%), Gaps = 80/528 (15%)
Query: 203 IEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIF 262
I+ LL K + + G+ + L G Y + ++ +FPR Y D +
Sbjct: 3 IKELLKKNVQYIKGVGEARAKLLHKLGIYDVEDIITYFPRDYEDRSRLK----------K 52
Query: 263 IGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGT 322
I E+I C+F E I+ +++ G +Y L K G
Sbjct: 53 INELIDGES----CAF---EGIIASKVSQHRFRKG-----------LTLYKVLIKDETGA 94
Query: 323 RFTSIPFLKSIEGKH-KVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
T+ F + GK ++GE G++ + Y+ E V + D R +
Sbjct: 95 -ITASWFNQHYIGKVLRIGERFIFFGRI-----SGRYKNLEVQSPVYEKHDIGEARNVLK 148
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKH 440
P+YPS L + +R TI+ AL+ + D +PK I E L + + IH PK
Sbjct: 149 IVPVYPSTADLTQNTIRATISSALEMVGGKLEDFLPKSILSEHQLSEINYSIQQIHFPKS 208
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
++ AR RL+F+E F LQ L + FEK DK N M+ +
Sbjct: 209 DEDFKNARYRLVFEELFLLQ-----LCLLSVKKSFEK----DKKGIEFKNVPEMDDF--- 256
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
++ LP+ LT++Q EI D++ MNRL+QGDVG GKT+VA LA + I +G
Sbjct: 257 ----IKMLPFKLTNAQKKVFEEIEKDMESNNVMNRLVQGDVGSGKTIVAVLALFKAIRNG 312
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQ A MVPTE+LA QHY+ + +L+ ++ ALLTGS KQ I +++++G++
Sbjct: 313 YQGALMVPTEILAEQHYKSISELM-----GRYDINTALLTGSQTKKQKTKILEEIKSGEV 367
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+LI + +EF L L I DEQ RFGV QR ++++ G
Sbjct: 368 QIVIGTHALIEDNIEFKNLGLVITDEQHRFGVRQR----------------SLLSKKGED 411
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTY 728
P + M+ATPIPRTLAL LYGD+ ++ I +LPPGR P+KTY
Sbjct: 412 -------PDAIVMTATPIPRTLALILYGDLDISIIDELPPGRKPVKTY 452
>gi|169335590|ref|ZP_02862783.1| hypothetical protein ANASTE_02005 [Anaerofustis stercorihominis DSM
17244]
gi|169258328|gb|EDS72294.1| putative ATP-dependent DNA helicase RecG [Anaerofustis
stercorihominis DSM 17244]
Length = 675
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 163/525 (31%), Positives = 252/525 (48%), Gaps = 93/525 (17%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
+S + G+ ++ L + G YTL LL ++PRTY +G+I S
Sbjct: 5 LSDLKGVGEKKEQALNSMGIYTLEDLLDYYPRTYE----------------VVGDITSIS 48
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFL 330
++ G + +V C + T +V + K +L F T F + P++
Sbjct: 49 KVRPGT-----KALVKCTFLEALKT---RIVRKNLKITKIKFLSEGSIFYATFFNN-PYI 99
Query: 331 -----KSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPI 385
K +E K + GKV R+ N+ E+ L ED++S+ K PI
Sbjct: 100 YSYFKKDVEYK--------LYGKVE--RNGNYLEIVSPKYSKL--EDNVSI--KNGLNPI 145
Query: 386 YP--SKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
YP +K L + I AL + D +P +I +E+GL+ L +AY IH+PK +++
Sbjct: 146 YPLSAKNKLTNKDFKKFILSALTKIDI-IDYIPYDIKKEYGLISLDEAYKNIHEPKTLED 204
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
A +R+ FDEF L + LG + E +++K K
Sbjct: 205 TLKANERMTFDEFCGFNLSIILNKNLNLGKKGEIFEVINK------------------DK 246
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
+ LP+ LT SQ ISEI DL V MNRL+QGDVG GKT+VA + I +GYQA
Sbjct: 247 FMNLLPFKLTPSQNKVISEIEEDLMSGVKMNRLVQGDVGSGKTIVALYSIYLAITNGYQA 306
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
AF PT++LA QH+E + ++ D ++ + + LL K+ R + +++G+ ++
Sbjct: 307 AFCAPTKILAMQHFESIKEIFDKLDVN-----VELLHSKMTAKEKREAYERIESGESKII 361
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GTH++ + KV+++ L LA++DEQ RFGV QRG D
Sbjct: 362 VGTHAVFSTKVKYNNLGLAVIDEQHRFGVAQRGFL-----------------------DK 398
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTY 728
+ + H L MSATPIPRTL L++Y D+ ++ I P R IKTY
Sbjct: 399 KGESVHTLVMSATPIPRTLTLSIYKDLDVSIIDKKPGNRKEIKTY 443
>gi|284047837|ref|YP_003398176.1| ATP-dependent DNA helicase RecG [Acidaminococcus fermentans DSM
20731]
gi|283952058|gb|ADB46861.1| ATP-dependent DNA helicase RecG [Acidaminococcus fermentans DSM
20731]
Length = 687
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 168/524 (32%), Positives = 254/524 (48%), Gaps = 86/524 (16%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRT-----YADLQNAQIDLDDGQYFIFIGE 265
++ + G+ + + EN T+ LL+HFPR Y+ ++ G+ +F G
Sbjct: 7 VTRLKGIGPKKALEFENINVVTIGDLLNHFPRQGCYLDYSHIRTIGELTTGGEMQLFRGT 66
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFT 325
I+ ++ + + + +G + T E+V F T T
Sbjct: 67 IVRMNNRRSARNLKYATITIG------DGTGFAEIV---------------LFGAQTYMT 105
Query: 326 SIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPI 385
+ + G+ V V GKV R+ + ++ +K++ A G P
Sbjct: 106 RV---------YHTGDEVLVIGKVMPGRTAK--SVTGASLSHVKED---GAEAPG-ILPT 150
Query: 386 YPSKGGLNASLLRDTIARALQALPANFDP--VPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
Y G L + +R + +AL AL P +P++I + L +A IH PK +
Sbjct: 151 YALTGSLTQNQVRGAVRQAL-ALARKELPECLPEKILRAKQFLPRLEALENIHFPKSPEL 209
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
+ AR+RLIF+E F+LQ G L+ +E + + +G+ M +L +K
Sbjct: 210 LEKARQRLIFEELFFLQCGLLHHRVE---IKKDSQGI------------KMARCGTLVRK 254
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
+L L +SLT SQ A EI D++ P PMNRL+QGDVG GKT +A LA + + +GYQ
Sbjct: 255 VLDNLGFSLTDSQKKAWQEIDDDMQSPEPMNRLVQGDVGSGKTALALLALAKAVENGYQG 314
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
M PTE+LA QHY+ + K+L+ + ALLTG K R + + L G I V
Sbjct: 315 CLMAPTEILAEQHYQEMQKVLEPA-----GIRTALLTGGLSAKTRRQVLEGLADGSIQAV 369
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GT++LI +KV F +L LAI DEQ RFGV QR + +K Y
Sbjct: 370 VGTYALIQDKVVFHSLALAITDEQHRFGVAQRAKLQAKSQY------------------- 410
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
APHVL M+ATPIPRTLAL +YGD+ ++ + LPPGR P++T
Sbjct: 411 ---APHVLVMTATPIPRTLALTVYGDLDVSLMKGLPPGRKPVRT 451
>gi|118444201|ref|YP_878305.1| ATP-dependent DNA helicase RecG [Clostridium novyi NT]
gi|118134657|gb|ABK61701.1| ATP-dependent DNA helicase RecG [Clostridium novyi NT]
Length = 673
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 149/423 (35%), Positives = 213/423 (50%), Gaps = 64/423 (15%)
Query: 319 FRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRA 378
F+G F K I+ K V + + GKV+ R+N + N +++D +
Sbjct: 91 FKGKWFNQ----KYIKNKFMVNKEYFIFGKVQLERNNITFT----NPTIVEDPESFL--- 139
Query: 379 KGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQP 438
P Y KG L TI L + + +P +I ++ L+ L +A IH+P
Sbjct: 140 --NVIPKYSLKGSLTNKFFEKTIKHVLDNIEI-VENLPSQILNKYNLISLDEAIRNIHKP 196
Query: 439 KHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWS 498
+ A+ RL F E F L L +L +Y+K A + S
Sbjct: 197 TGFKSLEEAQNRLKFQELFTYSLKLL---------------MLKQYKKSEGVAFKI---S 238
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
K L ++P +LT+SQ I EI+ D K+ VPMNRL+QGDVG GKT+VA ++ VI
Sbjct: 239 DELKILKDSIPVTLTNSQNKVIREILIDEKRDVPMNRLVQGDVGSGKTIVALISIFNVIK 298
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+GYQ M PTE+LA QHY ++L + I LLTGST K ++ L+ G
Sbjct: 299 NGYQGCLMAPTEILANQHYTQAIELFKDFN-----ISIELLTGST--KHKDEVKNRLKNG 351
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
I L+IGTH+L+ + VEFS L + + DEQ RFGV QR SKLY
Sbjct: 352 SIDLIIGTHALLEDDVEFSKLGIVVTDEQHRFGVKQR----SKLY--------------- 392
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYE 738
+++ +L M+ATPIPRTLAL++YGD+ ++ I +LPPGR I TY + N+K +
Sbjct: 393 ----NKNNNIDILVMTATPIPRTLALSIYGDLDVSSIDELPPGRKKIDTYAV--NDKFRK 446
Query: 739 NVY 741
VY
Sbjct: 447 RVY 449
>gi|257413332|ref|ZP_05591609.1| ATP-dependent DNA helicase RecG [Roseburia intestinalis L1-82]
gi|257203890|gb|EEV02175.1| ATP-dependent DNA helicase RecG [Roseburia intestinalis L1-82]
Length = 550
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 168/523 (32%), Positives = 254/523 (48%), Gaps = 84/523 (16%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADL-QNAQID-LDDGQYFIFIGEIIS 268
I V ++ L+H++ G YT+ +L H+PRTY Q +D + DG+ +G I
Sbjct: 10 IKGVGAKTEELFHKI---GVYTVGDILLHYPRTYIQYPQAKHVDEVLDGEQAAVLGRITR 66
Query: 269 SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIP 328
+ ++ + + +E + E+V ++R +P
Sbjct: 67 TPVVRKVRTMQITVTTI------SEMGASLELV----------------WYR------MP 98
Query: 329 FLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPS 388
++K+ KVG GKV + N M + + +E S+ P+Y
Sbjct: 99 YMKN---NLKVGSTYIFYGKVN--KKNGRLVMEQ--AAMFTEEQYASMEQVF--LPVYTL 149
Query: 389 KGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLAR 448
GL+ +L+ T+ AL D +P I +++GL A IH P+ ++ AR
Sbjct: 150 TNGLSNNLVTKTVRAALGDEHLFMDYLPHAIREKYGLCEYNYAIRQIHFPEDMETLITAR 209
Query: 449 KRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRAL 508
+RL+FDEFF L L Q++KE K+ K + + E T +L+ L
Sbjct: 210 RRLVFDEFF----------LFILSMQYQKE----KHVKEKNEFVFAE--DDFTDELIERL 253
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
PY LT++Q A++++ D++ M RL+QGDVG GKT+VAFLA + +GYQ+A M P
Sbjct: 254 PYELTNAQKKALADVKRDMRSETVMQRLIQGDVGSGKTIVAFLAMADTAHNGYQSAIMAP 313
Query: 569 TELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHS 628
TE+LA QHYE + + H P I LLTGS KQ R + L+ ++IGTH+
Sbjct: 314 TEVLARQHYESYQSMCEQF--GLHIP-IVLLTGSMTAKQKRRAYEALEVYSNAMIIGTHA 370
Query: 629 LIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAP 688
LI EK + L L I DEQ RFGV QR F K G+ P
Sbjct: 371 LIQEKAIYQNLALVITDEQHRFGVRQRETFAGK----------------GTE-------P 407
Query: 689 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
HVL MSATPIPRTLA+ +YGD+ ++ I ++P R+PIK +++
Sbjct: 408 HVLVMSATPIPRTLAIIIYGDLDISVIDEVPAKRLPIKNCVVD 450
>gi|168188107|ref|ZP_02622742.1| ATP-dependent DNA helicase RecG [Clostridium botulinum C str.
Eklund]
gi|169294058|gb|EDS76191.1| ATP-dependent DNA helicase RecG [Clostridium botulinum C str.
Eklund]
Length = 673
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 130/362 (35%), Positives = 190/362 (52%), Gaps = 59/362 (16%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
P Y KG + ++TI L+ + + +P I ++ L+ L +A IH P +
Sbjct: 143 PKYSLKGSITNKFFQNTIKHILENIDI-LENLPSTILNKYSLISLDEAIRNIHNPTGVKS 201
Query: 444 ADLARKRLIFDEFFYLQLGRL----YQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSS 499
+ A+ RL F E F L L Y+ +G+G + E
Sbjct: 202 LEEAKNRLKFQELFTYSLKLLMLKQYKKSKGVGFKISDE--------------------- 240
Query: 500 LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
K L ++P++LT+SQ I EI+ D K+ +PMNRL+QGDVG GKT+VA ++ V+ +
Sbjct: 241 -LKILKDSIPFNLTNSQNKVIREILIDEKRDIPMNRLVQGDVGSGKTIVALISIFNVVKN 299
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
GYQ M PTE+LA QHY L+L + I LLTGST K ++ L++G
Sbjct: 300 GYQGCLMAPTEILANQHYTQALELFKDFN-----IAIELLTGST--KHKDEVKNRLKSGS 352
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
I L+IGTH+L+ + VEFS L + + DEQ RFGV QR SKLY
Sbjct: 353 IDLIIGTHALLEDDVEFSKLGMVVTDEQHRFGVKQR----SKLY---------------- 392
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYEN 739
+++ VL M+ATPIPRTLAL++YGD+ ++ I +LPPGR + TY + N++
Sbjct: 393 ---NKNNNIDVLVMTATPIPRTLALSIYGDLDISSIDELPPGRKKVDTYSV--NDRARNR 447
Query: 740 VY 741
+Y
Sbjct: 448 IY 449
>gi|397680006|ref|YP_006521541.1| ATP-dependent DNA helicase recG [Mycobacterium massiliense str. GO
06]
gi|418247575|ref|ZP_12873961.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 47J26]
gi|420932395|ref|ZP_15395670.1| ATP-dependent DNA helicase RecG [Mycobacterium massiliense
1S-151-0930]
gi|420937426|ref|ZP_15400695.1| ATP-dependent DNA helicase RecG [Mycobacterium massiliense
1S-152-0914]
gi|420942654|ref|ZP_15405910.1| ATP-dependent DNA helicase RecG [Mycobacterium massiliense
1S-153-0915]
gi|420948468|ref|ZP_15411718.1| ATP-dependent DNA helicase RecG [Mycobacterium massiliense
1S-154-0310]
gi|420952915|ref|ZP_15416157.1| ATP-dependent DNA helicase RecG [Mycobacterium massiliense 2B-0626]
gi|420957086|ref|ZP_15420321.1| ATP-dependent DNA helicase RecG [Mycobacterium massiliense 2B-0107]
gi|420964230|ref|ZP_15427454.1| ATP-dependent DNA helicase RecG [Mycobacterium massiliense 2B-1231]
gi|420993036|ref|ZP_15456182.1| ATP-dependent DNA helicase RecG [Mycobacterium massiliense 2B-0307]
gi|420998810|ref|ZP_15461945.1| ATP-dependent DNA helicase RecG [Mycobacterium massiliense
2B-0912-R]
gi|421003332|ref|ZP_15466454.1| ATP-dependent DNA helicase RecG [Mycobacterium massiliense
2B-0912-S]
gi|353452068|gb|EHC00462.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 47J26]
gi|392137154|gb|EIU62891.1| ATP-dependent DNA helicase RecG [Mycobacterium massiliense
1S-151-0930]
gi|392142941|gb|EIU68666.1| ATP-dependent DNA helicase RecG [Mycobacterium massiliense
1S-152-0914]
gi|392147751|gb|EIU73469.1| ATP-dependent DNA helicase RecG [Mycobacterium massiliense
1S-153-0915]
gi|392151828|gb|EIU77535.1| ATP-dependent DNA helicase RecG [Mycobacterium massiliense 2B-0626]
gi|392155498|gb|EIU81204.1| ATP-dependent DNA helicase RecG [Mycobacterium massiliense
1S-154-0310]
gi|392177592|gb|EIV03245.1| ATP-dependent DNA helicase RecG [Mycobacterium massiliense
2B-0912-R]
gi|392179138|gb|EIV04790.1| ATP-dependent DNA helicase RecG [Mycobacterium massiliense 2B-0307]
gi|392192035|gb|EIV17659.1| ATP-dependent DNA helicase RecG [Mycobacterium massiliense
2B-0912-S]
gi|392247143|gb|EIV72620.1| ATP-dependent DNA helicase RecG [Mycobacterium massiliense 2B-1231]
gi|392250917|gb|EIV76390.1| ATP-dependent DNA helicase RecG [Mycobacterium massiliense 2B-0107]
gi|395458271|gb|AFN63934.1| ATP-dependent DNA helicase recG [Mycobacterium massiliense str. GO
06]
Length = 746
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 186/588 (31%), Positives = 255/588 (43%), Gaps = 142/588 (24%)
Query: 217 LSKRLYHQLEN---------CGFYTLRKLLHHFPRTYA---DLQNAQIDLDDGQY----- 259
LS RL H L N G T+ LLHH+PR Y+ L++ Q DG+
Sbjct: 4 LSDRLDHVLGNKASDVLDAEFGLITVEDLLHHYPRRYSTDFSLRDEQ----DGERAKPGE 59
Query: 260 ------FIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYL 313
FI E+ S R K FL V +G + T +
Sbjct: 60 HTTLVGFITSAELKSMRNRKG----QFLSVTLGSAPHAVQAT----------------FF 99
Query: 314 HLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDD 373
H K R +VG V +SG V R +Y VL+
Sbjct: 100 HPHKVKRDL---------------QVGNRVMLSGAVGEFRGKPQLTHPDYL--VLETALG 142
Query: 374 LSLRAKGRP-----------------------YPIYPSKGGLNASLLRDTIARALQALPA 410
S A+G +PIYP+ L + I R + +
Sbjct: 143 ESTEARGSTALRGIAGAARDASTAISAFQRNVFPIYPATKNLESW----DIYRCIDQVLT 198
Query: 411 NFDPVPKEITQ----EFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQ 466
DPVP+ + + E+GL+ L +A IH + E AR+RL FDE LQL +
Sbjct: 199 QLDPVPEALPEAVLAEYGLMSLDEALRKIHMSEDASEQKQARRRLAFDEALGLQLALAMR 258
Query: 467 MLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWD 526
G++ G P + A + L LL LP+ LT Q ++EI D
Sbjct: 259 R----GSEIGSAG-------PPMPLAQ----AGLRADLLGQLPFELTEGQRHVVAEIGED 303
Query: 527 LKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDN 586
L PMNRLLQG+VG GKTVVA LA M+ I +GYQ A + PTE+LA QH L +L +
Sbjct: 304 LAGVKPMNRLLQGEVGSGKTVVALLAMMQAIDAGYQCALLAPTEVLAVQHARSLRAMLGS 363
Query: 587 MEEDKH------KPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALR 640
+ IALLTGS + I+ D+ TG +VIGTH+L+ + V+F L
Sbjct: 364 LATAGELGAPDDATSIALLTGSISPAAKKQIKADVATGLAGIVIGTHALLQDSVDFHNLG 423
Query: 641 LAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPR 700
L +VDEQ RFGV QR R +K +P Q + PH+L M+ATPIPR
Sbjct: 424 LVVVDEQHRFGVEQRDRLRAK-----------------AP---QGIVPHLLVMTATPIPR 463
Query: 701 TLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK------GYENVYK 742
T+AL ++GD+ + + +LP GR PI T + EK G+E + +
Sbjct: 464 TVALTVFGDLETSTLRELPRGRQPITTTAVFTREKPGWLARGWERIAE 511
>gi|404404692|ref|ZP_10996276.1| ATP-dependent DNA helicase RecG [Alistipes sp. JC136]
Length = 703
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 171/547 (31%), Positives = 250/547 (45%), Gaps = 113/547 (20%)
Query: 206 LLDKCISCVPGLSKRLYHQLEN-CGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIG 264
+LD I V G+ + LE G TL +L H+P Y D I
Sbjct: 3 ILDNDIKFVAGVGEARAKLLERELGIRTLGDMLSHYPFRYIDRTR----------IYRIS 52
Query: 265 EIISSRGMKAGCSF-SFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTR 323
EI + AG S+ F + G A +G+K++ ++
Sbjct: 53 EITDA----AGLSYVQFRARVTGMAYAG-------------AGRKRRFTAFVQDPTGSAE 95
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGK---VRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG 380
+K IE + +VG + G+ R S H E+ E LS +A+
Sbjct: 96 LVWFQGVKWIEKRIEVGREYLIFGRPSFYRGELSMAHPELETM-------EQALSRKAES 148
Query: 381 RPYPIYPSKGGLNA---------------SLLRDTIARALQALPANFDPVPKEITQEFGL 425
IYPS L + +L RD IA DP+P+ + ++GL
Sbjct: 149 GMQGIYPSTEKLGSVLGAKGMYQIVCNAWALTRDRIA----------DPMPEAVRTKYGL 198
Query: 426 LCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLG----RLYQMLEGLGTQFEKEGLL 481
+ L DA IH P+ + A+ RL FDE +QL R ++ + G F K G +
Sbjct: 199 ISLRDAIYNIHFPQSQELLRQAQFRLKFDELLGVQLNIQQRRTERLAKSNGFLFPKVGGV 258
Query: 482 DKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDV 541
N Y E LP+ LT +Q I EI D MNRLLQGDV
Sbjct: 259 -------FNTFYNE-----------KLPFPLTGAQKRVIKEIRRDTVTGFQMNRLLQGDV 300
Query: 542 GCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTG 601
G GKT+VA + + + +GYQA M PTE+LA QH+ + ++L+ M+ K A+LTG
Sbjct: 301 GSGKTLVALMTMLLAVDNGYQACMMAPTEILARQHFATICRMLEGMD-----VKTAILTG 355
Query: 602 STPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSK 661
S+ K+ R+ + + +G++ ++IGTH+LI ++V+F+ L ++DEQ RFGV QR R +K
Sbjct: 356 SSKAKERRLALEGIASGEVDILIGTHALIEDRVQFANLGFVVIDEQHRFGVEQRARLWTK 415
Query: 662 LYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPG 721
PH+L M+ATPIPRTLA+ LYGD+ ++ I +LPPG
Sbjct: 416 ----------------------NEQPPHILVMTATPIPRTLAMTLYGDLDVSVIDELPPG 453
Query: 722 RIPIKTY 728
R PIKT+
Sbjct: 454 RRPIKTF 460
>gi|414582223|ref|ZP_11439363.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 5S-1215]
gi|420880455|ref|ZP_15343822.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 5S-0304]
gi|420884489|ref|ZP_15347849.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 5S-0421]
gi|420890811|ref|ZP_15354158.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 5S-0422]
gi|420895976|ref|ZP_15359315.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 5S-0708]
gi|420900360|ref|ZP_15363691.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 5S-0817]
gi|420905045|ref|ZP_15368363.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 5S-1212]
gi|420973051|ref|ZP_15436243.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 5S-0921]
gi|392078071|gb|EIU03898.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 5S-0422]
gi|392080252|gb|EIU06078.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 5S-0421]
gi|392085364|gb|EIU11189.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 5S-0304]
gi|392095288|gb|EIU21083.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 5S-0708]
gi|392097721|gb|EIU23515.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 5S-0817]
gi|392102949|gb|EIU28735.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 5S-1212]
gi|392117375|gb|EIU43143.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 5S-1215]
gi|392164602|gb|EIU90290.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 5S-0921]
Length = 746
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 186/588 (31%), Positives = 255/588 (43%), Gaps = 142/588 (24%)
Query: 217 LSKRLYHQLEN---------CGFYTLRKLLHHFPRTYA---DLQNAQIDLDDGQY----- 259
LS RL H L N G T+ LLHH+PR Y+ L++ Q DG+
Sbjct: 4 LSDRLDHVLGNKASDVLDAEFGLITVEDLLHHYPRRYSTDFSLRDEQ----DGERAKPGE 59
Query: 260 ------FIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYL 313
FI E+ S R K FL V +G + T +
Sbjct: 60 HTTLVGFITSAELKSMRNRKG----QFLSVTLGSAPHAVQAT----------------FF 99
Query: 314 HLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDD 373
H K R +VG V +SG V R +Y VL+
Sbjct: 100 HPHKVKRDL---------------QVGNRVMLSGAVGEFRGKPQLTHPDYL--VLETALG 142
Query: 374 LSLRAKGRP-----------------------YPIYPSKGGLNASLLRDTIARALQALPA 410
S A+G +PIYP+ L + I R + +
Sbjct: 143 ESTEARGSTALRGIAGAARDASTAISAFQRNVFPIYPATKNLESW----DIYRCIDQVLT 198
Query: 411 NFDPVPKEITQ----EFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQ 466
DPVP+ + + E+GL+ L +A IH + E AR+RL FDE LQL +
Sbjct: 199 QLDPVPEALPEAVLAEYGLMSLDEALRKIHMSEDASEQKQARRRLAFDEALGLQLALAMR 258
Query: 467 MLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWD 526
G++ G P + A + L LL LP+ LT Q ++EI D
Sbjct: 259 R----GSEIGSAG-------PPMPLAQ----AGLRADLLGQLPFELTEGQRHVVAEIGED 303
Query: 527 LKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDN 586
L PMNRLLQG+VG GKTVVA LA M+ I +GYQ A + PTE+LA QH L +L +
Sbjct: 304 LAGVKPMNRLLQGEVGSGKTVVALLAMMQAIDAGYQCALLAPTEVLAVQHARSLRAMLGS 363
Query: 587 MEEDKH------KPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALR 640
+ IALLTGS + I+ D+ TG +VIGTH+L+ + V+F L
Sbjct: 364 LATAGELGAPDDATSIALLTGSMSPAAKKQIKADVATGLAGIVIGTHALLQDSVDFHNLG 423
Query: 641 LAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPR 700
L +VDEQ RFGV QR R +K +P Q + PH+L M+ATPIPR
Sbjct: 424 LVVVDEQHRFGVEQRDRLRAK-----------------AP---QGIVPHLLVMTATPIPR 463
Query: 701 TLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK------GYENVYK 742
T+AL ++GD+ + + +LP GR PI T + EK G+E + +
Sbjct: 464 TVALTVFGDLETSTLRELPRGRQPITTTAVFTREKPGWLARGWERIAE 511
>gi|334134789|ref|ZP_08508291.1| ATP-dependent DNA helicase RecG [Paenibacillus sp. HGF7]
gi|333607633|gb|EGL18945.1| ATP-dependent DNA helicase RecG [Paenibacillus sp. HGF7]
Length = 681
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 161/526 (30%), Positives = 249/526 (47%), Gaps = 92/526 (17%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIISS 269
++ V G+ + +L+ G + LL ++P Y D + + DG+ G+I+S
Sbjct: 8 VTEVRGIGGQKAEELQALGITRVAHLLEYYPFRYEDYSIRDLTQVKDGEKITVQGKIMS- 66
Query: 270 RGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIY--LHLKKFFRGTRFTSI 327
E V G+K ++ + + FF + +
Sbjct: 67 -----------------------------EPVLQRYGRKNRLSCKVVIDHFFVTAVWFNR 97
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDE-DDLSLRAKGRPYPIY 386
PFLK + G + ++GK ++ R + + V E D G P+Y
Sbjct: 98 PFLKD---QLAPGREIVLTGK---------WDQRRHQMTVSDSEFPDRGTSKTGTLQPVY 145
Query: 387 PSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
G L +R A+AL A + VP E+ +++ LL A IH+P+ ++ +
Sbjct: 146 SVGGSLTQHFMRKATAQALTQYSAMVSEIVPAELLRKYRLLPRRRAMEIIHRPQGTEDGN 205
Query: 446 LARKRLIFDEFFYLQLG-RLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
AR+R++++E F QL ++ + T+ +GL + P++ A
Sbjct: 206 EARRRMVYEELFLFQLKMHAFRAI----TRNRADGLAQQVDLPKVRA------------F 249
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
+R LP++LT SQ I+EI+ D+++P MNRLLQGDVG GKTVVA A + +G Q A
Sbjct: 250 VRGLPFTLTPSQKKVIAEILQDMQEPYTMNRLLQGDVGAGKTVVAAAALYATVTAGCQGA 309
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
MVPTE+LA QH L + + + ++ALLTGST +Q R + LQ G + +++
Sbjct: 310 LMVPTEILAEQHNRSLTAMF-----EPYGLQVALLTGSTTARQRRELLASLQMGMLDILV 364
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+LI E V F L L + DEQ RFGV QR K
Sbjct: 365 GTHALIQEDVFFRKLGLVVTDEQHRFGVNQRSILRRK----------------------- 401
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
M P VL M+ATPIPRTLA+ +GD+ ++ + +LP GR PIKTY +
Sbjct: 402 GMNPDVLTMTATPIPRTLAITAFGDLDVSTLRELPKGRKPIKTYWV 447
>gi|381189073|ref|ZP_09896629.1| ATP-dependent DNA helicase RecG [Flavobacterium frigoris PS1]
gi|379648906|gb|EIA07485.1| ATP-dependent DNA helicase RecG [Flavobacterium frigoris PS1]
Length = 701
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 165/516 (31%), Positives = 250/516 (48%), Gaps = 99/516 (19%)
Query: 228 CGFYTLRKLLHHFPRTYAD------LQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFL 281
G + + L++ +P Y D + Q ++ + Q IG+II+ + ++ G L
Sbjct: 27 LGIHKYKDLINFYPNRYIDRTRYYKINELQNNVAEVQ---IIGKIINVKTVEFGKGRKRL 83
Query: 282 EVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGE 341
V + DT GQ + ++ K+ R + K+ E
Sbjct: 84 ---VATFVDDT-------------GQMELVWFQGHKWVRESL--------------KINE 113
Query: 342 FVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGL-NASLLRDT 400
+ GK + N Y M I++L E + SLR+ +P +YPS L N + T
Sbjct: 114 VSVIFGKCTSF--NGIYNMSHPEIELL-SEHEQSLRSAMQP--VYPSTETLTNRGISNRT 168
Query: 401 IARALQALPANF-----DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDE 455
I + +Q L + +P + E L+ DA + IH PK + A+ RL+F+E
Sbjct: 169 INKIMQQLFLETHTLFTETLPDYLITELKLISKKDALINIHFPKSTEALAKAKFRLVFEE 228
Query: 456 FFYLQL----GRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYS 511
F++QL L Q + G F K G N Y LP+
Sbjct: 229 LFFIQLQLITKNLVQKHKIKGHPFTKVG-------ENFNDFYQN-----------HLPFQ 270
Query: 512 LTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTEL 571
LT +Q I EI D+ MNRLLQGDVG GKT+VAF++ + + +G+QA M PTE+
Sbjct: 271 LTGAQKRVIKEIRTDMGTNAQMNRLLQGDVGSGKTIVAFMSMLLALDNGFQACLMAPTEI 330
Query: 572 LATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIA 631
LA QH+ L +L + + + I +LTGS+ R+I ++L+ G + ++IGTH+L+
Sbjct: 331 LANQHFIGLSELANELNIN-----IKILTGSSKTAARRIIHEELENGTLQILIGTHALLE 385
Query: 632 EKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVL 691
+KV+F L LA++DEQ RFGV QR SKL+ + PHVL
Sbjct: 386 DKVKFQNLGLAVIDEQHRFGVEQR----SKLW------------------KKNEIPPHVL 423
Query: 692 AMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
M+ATPIPRTLA++LYGD+ ++ I +LPPGR PI+T
Sbjct: 424 VMTATPIPRTLAMSLYGDLDISVIDELPPGRKPIQT 459
>gi|365871205|ref|ZP_09410746.1| ATP-dependent DNA helicase RecG [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|421050284|ref|ZP_15513278.1| ATP-dependent DNA helicase RecG [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|363995008|gb|EHM16226.1| ATP-dependent DNA helicase RecG [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|392238887|gb|EIV64380.1| ATP-dependent DNA helicase RecG [Mycobacterium massiliense CCUG
48898]
Length = 746
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 186/588 (31%), Positives = 255/588 (43%), Gaps = 142/588 (24%)
Query: 217 LSKRLYHQLEN---------CGFYTLRKLLHHFPRTYA---DLQNAQIDLDDGQY----- 259
LS RL H L N G T+ LLHH+PR Y+ L++ Q DG+
Sbjct: 4 LSDRLDHVLGNKASDVLDAEFGLITVEDLLHHYPRRYSTDFSLRDEQ----DGERAKPGE 59
Query: 260 ------FIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYL 313
FI E+ S R K FL V +G + T +
Sbjct: 60 HTTLVGFITSAELKSMRNRKG----QFLSVTLGSAPHAVQAT----------------FF 99
Query: 314 HLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDD 373
H K R +VG V +SG V R +Y VL+
Sbjct: 100 HPHKVKRDL---------------QVGNRVMLSGAVGEFRGKPQLTHPDYL--VLETALG 142
Query: 374 LSLRAKGRP-----------------------YPIYPSKGGLNASLLRDTIARALQALPA 410
S A+G +PIYP+ L + I R + +
Sbjct: 143 ESTEARGSTALRGIAGAARDASTAISAFQRNVFPIYPATKNLESW----DIYRCIDQVLT 198
Query: 411 NFDPVPKEITQ----EFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQ 466
DPVP+ + + E+GL+ L +A IH + E AR+RL FDE LQL +
Sbjct: 199 QLDPVPEALPEAVLAEYGLMSLDEALRKIHMSEDASEQKQARRRLAFDEALGLQLALAMR 258
Query: 467 MLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWD 526
G++ G P + A + L LL LP+ LT Q ++EI D
Sbjct: 259 R----GSEIGSAG-------PPMPLAQ----AGLRADLLGQLPFELTEGQRHVVAEIRED 303
Query: 527 LKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDN 586
L PMNRLLQG+VG GKTVVA LA M+ I +GYQ A + PTE+LA QH L +L +
Sbjct: 304 LAGVKPMNRLLQGEVGSGKTVVALLAMMQAIDAGYQCALLAPTEVLAVQHARSLRAMLGS 363
Query: 587 MEEDKH------KPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALR 640
+ IALLTGS + I+ D+ TG +VIGTH+L+ + V+F L
Sbjct: 364 LATAGELGAPDDATSIALLTGSMSPAAKKQIKADVATGLAGIVIGTHALLQDSVDFHNLG 423
Query: 641 LAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPR 700
L +VDEQ RFGV QR R +K +P Q + PH+L M+ATPIPR
Sbjct: 424 LVVVDEQHRFGVEQRDRLRAK-----------------AP---QGIVPHLLVMTATPIPR 463
Query: 701 TLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK------GYENVYK 742
T+AL ++GD+ + + +LP GR PI T + EK G+E + +
Sbjct: 464 TVALTVFGDLETSTLRELPRGRQPITTTAVFTREKPGWLARGWERIAE 511
>gi|323702705|ref|ZP_08114366.1| ATP-dependent DNA helicase RecG [Desulfotomaculum nigrificans DSM
574]
gi|333923271|ref|YP_004496851.1| ATP-dependent DNA helicase RecG [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|323532368|gb|EGB22246.1| ATP-dependent DNA helicase RecG [Desulfotomaculum nigrificans DSM
574]
gi|333748832|gb|AEF93939.1| ATP-dependent DNA helicase RecG [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 685
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 176/527 (33%), Positives = 255/527 (48%), Gaps = 88/527 (16%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
+ + + + G+ QLE G T+ LL+HFPR Y D L + GE+
Sbjct: 4 VQRPVQFLKGVGPSRSKQLERLGIITIEDLLYHFPREYHDR-----SLIRPAHSFAHGEM 58
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
+ +G VI G E + ++ D F F
Sbjct: 59 ATVKGT----------VIGGSETKPRRGLTITKLALQDGAAT----------FYAVWFNQ 98
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
P++K ++ G+ + ++GK+ R+ ++ + ++L ++ L GR PIY
Sbjct: 99 -PYIKK---QYTTGKKLLITGKID--RNFGLPQVHVTDHELLDGDEGLH---SGRIVPIY 149
Query: 387 PSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
P+ ++ LR I AL + + +P +I + L CL +A IH P+ ++
Sbjct: 150 PATENVSQRFLRSIIKFALDQIGTQVPEFLPDKILDRYNLPCLPEALYNIHFPRDMESCQ 209
Query: 446 LARKRLIFDEFFYLQLG----RLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
ARKR I +E F QLG R Y R+P+++ Y +G LT
Sbjct: 210 RARKRFILEELFLFQLGLGLQRSYLT-----------------RQPKMHR-YNQG--RLT 249
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
+LL+ LP+SLT++Q EI DL+ P PMNRLLQGDVG GKTVVA LA SG
Sbjct: 250 GQLLQNLPFSLTAAQQRVWQEIESDLQGPHPMNRLLQGDVGAGKTVVAALALCRAAESGL 309
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q + M PTELLA QH + + L+ + K+ALLTGS+ + +++ D+ G I
Sbjct: 310 QGSLMAPTELLAEQHARSIKEFLEPL-----GIKVALLTGSSKRGRQQVL-ADIANGVIP 363
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+V+GTH+LI E+V+F L L +VDEQ RFGV QR K Y
Sbjct: 364 VVVGTHALIYEQVQFKNLGLVVVDEQHRFGVRQRAALLDKGYR----------------- 406
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTY 728
P +L M+ATPIPRTLAL LYGD+ ++ I +LPPGR IKTY
Sbjct: 407 ------PDMLVMTATPIPRTLALTLYGDLDVSVIDELPPGRQDIKTY 447
>gi|332881158|ref|ZP_08448818.1| ATP-dependent DNA helicase RecG [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332680907|gb|EGJ53844.1| ATP-dependent DNA helicase RecG [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 705
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 171/549 (31%), Positives = 261/549 (47%), Gaps = 119/549 (21%)
Query: 206 LLDKCISCVPGLSKRLYHQLEN-CGFYTLRKLLHHFPRTYAD---------LQNAQIDLD 255
LL + + G+ K+ L++ G + LL+ FP Y D LQN ++
Sbjct: 7 LLHTSVEYLRGVGKQRAELLKSELGIEQYQDLLNLFPNRYIDRTKFYKINELQNNNAEVQ 66
Query: 256 DGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHL 315
IG+I++ R + + + A T DE +GQ + ++
Sbjct: 67 ------LIGKIVNLRTVASAQQ----------KQARLVATFVDE-----TGQMELVW--- 102
Query: 316 KKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHY----EMREYNIDVLKDE 371
F+G ++ S K+ E + GKV NH+ M +D+L D
Sbjct: 103 ---FKGHKWISDSL--------KLNESYVIFGKV------NHFGGIFSMPHPEMDLLVD- 144
Query: 372 DDLSLRAKGRPYPIYPS-----KGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGL 425
+ P+YPS K G++ ++R I + + F + +P I + L
Sbjct: 145 --FNKAGHSSIQPVYPSTEKLTKRGVSNRVMRQLIHTVFEEVGYQFMENLPASIRKTLNL 202
Query: 426 LCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDK-- 483
+ +A IH P A RL F+E FY+QL Q ++ LL K
Sbjct: 203 ISKQEAMRNIHFPADQSMLTKATVRLKFEELFYIQL------------QLVRKNLLQKQK 250
Query: 484 -----YRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQ 538
+RK + A+M ++ LP+ LT++Q + EI DL MNRLLQ
Sbjct: 251 FQGMPFRK--VGDAFMNFYN-------HHLPFPLTNAQKRVLKEIRADLGSNAQMNRLLQ 301
Query: 539 GDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIAL 598
GDVG GKT+VA + + + +G+QA M PTE+LATQHY+ + LL N +AL
Sbjct: 302 GDVGSGKTIVALMTMLLAVDNGFQACLMAPTEILATQHYQSISALLQNT-----GISVAL 356
Query: 599 LTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRF 658
LTGS+ K+ R++ + LQ G ++++IGTH+L+ +KV+F+ L LAI+DEQ RFGV QR +
Sbjct: 357 LTGSSKTKERRILDEQLQEGSLSILIGTHALLEDKVQFANLGLAIIDEQHRFGVEQRAKL 416
Query: 659 NSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDL 718
K + PH+L M+ATPIPRTLA+++YGD+ ++ I +L
Sbjct: 417 WRK----------------------NTLPPHILVMTATPIPRTLAMSVYGDLDVSVIDEL 454
Query: 719 PPGRIPIKT 727
PPGR PIKT
Sbjct: 455 PPGRKPIKT 463
>gi|229496953|ref|ZP_04390658.1| ATP-dependent DNA helicase RecG [Porphyromonas endodontalis ATCC
35406]
gi|229316055|gb|EEN81983.1| ATP-dependent DNA helicase RecG [Porphyromonas endodontalis ATCC
35406]
Length = 699
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 174/533 (32%), Positives = 256/533 (48%), Gaps = 92/533 (17%)
Query: 207 LDKCISCVPGLSKRLYHQLEN-CGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGE 265
L I +PG+ +R L++ G YT R LL+ FP Y D
Sbjct: 6 LQTTIEYLPGVGERKSKLLQSELGVYTFRDLLYTFPFRYVDRSR---------------- 49
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADT--ETTSGDEVVNIDSGQKKKIYLHLKKFFRGTR 323
I++ R ++ G L I+ + + T D+G + ++ F+G+
Sbjct: 50 ILTVRELRDGGGEVQLRGIISDYVLEGFGRKTRLKATFRDDTGSIELVW------FKGSD 103
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNI---DVLKDEDDLSLRAKG 380
+ S F G V G+ +A HY YNI +V E + + G
Sbjct: 104 YISEQF--------PTGREYIVYGRPKAF---GHY----YNIVHPEVTPIER--ASQVAG 146
Query: 381 RPYPIYPS-----KGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMG 434
+Y + + GL++ LR+ I R Q + +P+E+ +GL+ L A
Sbjct: 147 GLLSVYHTSEKMKRSGLDSKNLRNAIGRLCQIAHLYIRETLPEEVRNRWGLIPLPQALYA 206
Query: 435 IHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYM 494
IH PK + A +RL FDE + L T+ E++ Y ++ +
Sbjct: 207 IHFPKDDATLEKAVQRLKFDE-------LFFLQLSLQLTKKERKSHFKGYLFDQVGEYFN 259
Query: 495 EGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACM 554
+SSL PY LT +Q + EI D + + MNRLLQGDVGCGKT+VA + +
Sbjct: 260 SYYSSL--------PYDLTQAQKRVLREIRHDTQSGLQMNRLLQGDVGCGKTLVAVFSML 311
Query: 555 EVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKD 614
+ +G+QA M PTE+LA QHYE L L + ++ALLTGSTP ++ I +D
Sbjct: 312 LALDNGWQACMMAPTEILAQQHYETLRGQLAPL-----GIEVALLTGSTPQRERTTILED 366
Query: 615 LQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMV 674
L G + L++GTH+L+ E+V+F+ L LA++DEQ RFGVVQR R L+ S+
Sbjct: 367 LAQGSLRLLVGTHALLEERVQFAHLALAVIDEQHRFGVVQRAR----LWEKSLD------ 416
Query: 675 NSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PHVL MSATPIPRTLA+ LYGD+ ++ I +LPPGR PI T
Sbjct: 417 -----------LLPHVLIMSATPIPRTLAMTLYGDLDISVIDELPPGRKPIST 458
>gi|452953069|gb|EME58492.1| ATP-dependent DNA helicase RecG [Amycolatopsis decaplanina DSM
44594]
Length = 717
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 163/524 (31%), Positives = 253/524 (48%), Gaps = 97/524 (18%)
Query: 232 TLRKLLHHFPRTYADLQN----AQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGC 287
T+ LL H+PR YA+ A ++L + + E ++ R MKA + + LE++
Sbjct: 28 TVSDLLRHYPRRYAERGQLTDIAGLELGEHATVMARIERVNKRRMKA-RNGTLLEMV--- 83
Query: 288 EIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSG 347
I G+++ + +R + GK+ G F +G
Sbjct: 84 ---------------ITDGKRRLQCTFFNQAWREKEL--------VPGKN--GLF---AG 115
Query: 348 KVRAMR-----SNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIA 402
KV A R +N YE+ E + + +D L+ P+YP+ G+ ++ ++
Sbjct: 116 KVTAFRDVLQLANPEYELFEADREAEALDDFLA-----EIIPVYPAAQGIPTWVIAKSVR 170
Query: 403 RALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQL- 461
+ L L DP+P E+ +GL L A GIH+P D + AR+RL +DE +QL
Sbjct: 171 QVLDVLEVEEDPMPTELLARYGLPSLESALRGIHRPSGWDALNSARRRLKWDEAMAVQLI 230
Query: 462 --GRLYQMLE--GLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQL 517
R + ++ + G+LD + K LP++LTS Q
Sbjct: 231 FAQRRHSLVSRPAKACPHKDGGILDAFDK--------------------RLPFALTSGQQ 270
Query: 518 SAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHY 577
EI DL PMNRLLQG+VG GKTVVA A ++V+ SG QAA + PTE+LA QH
Sbjct: 271 EIGDEIARDLSTEHPMNRLLQGEVGSGKTVVALRAMLQVVDSGRQAAMLAPTEVLAAQHA 330
Query: 578 EHLLKLLDNMEE------DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIA 631
L ++L ++ + ++ ++ LLTGS K+ + + +G+ +V+GTH+LI
Sbjct: 331 RSLREMLGDLGQAGELGGAENATRVTLLTGSMGAKERKKALLETVSGEAGIVVGTHALIQ 390
Query: 632 EKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVL 691
+ V F+ L L +VDEQ RFGV QR S+ SD +PHVL
Sbjct: 391 DTVSFADLGLVVVDEQHRFGVEQRDALRSR-------------GSD-------ETSPHVL 430
Query: 692 AMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
M+ATPIPRT+A+ +YGD+ + + +P GR PIKT ++ E+
Sbjct: 431 VMTATPIPRTVAMTVYGDLETSALRVMPAGRSPIKTSVVPVAER 474
>gi|375013642|ref|YP_004990630.1| ATP-dependent DNA helicase RecG [Owenweeksia hongkongensis DSM
17368]
gi|359349566|gb|AEV33985.1| ATP-dependent DNA helicase RecG [Owenweeksia hongkongensis DSM
17368]
Length = 699
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/388 (35%), Positives = 199/388 (51%), Gaps = 68/388 (17%)
Query: 355 NNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDP 414
NN Y +I++L++ L+ P+YPS LN R+ AR L L P
Sbjct: 123 NNRYNFAHPDIELLEEFKASPLQGL---QPVYPSTEKLNG---RNINARTLAKLTQTLLP 176
Query: 415 ---------VPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLY 465
P E +E GL +Y +H PK+++ + AR RL FDEFF LQL
Sbjct: 177 QLKGALPEIYPPEFLKENGLAPREASYFEVHFPKNVERLEKARYRLKFDEFFMLQL---- 232
Query: 466 QMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWS------SLTKKLLRALPYSLTSSQLSA 519
D R+ +++ G++ + LP+ LT +Q
Sbjct: 233 ----------------DMIRQKKIHQIKQRGFAFSALGENFNNFYNNELPFELTGAQKKV 276
Query: 520 ISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEH 579
+ EI D+ + MNRL+QGDVG GKT+VA + + I +G+QA M PTE+LATQHY
Sbjct: 277 LKEIRKDIMHGLHMNRLVQGDVGSGKTIVALMCMLMAIDNGFQACLMAPTEILATQHYNG 336
Query: 580 LLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSAL 639
L +L++N+ + IALLTGST R + L+ G + ++IGTH+LI +KV++ L
Sbjct: 337 LKELVENLPVE-----IALLTGSTKAAARRELHAKLEDGSLNILIGTHALIEDKVKYKNL 391
Query: 640 RLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIP 699
+A++DEQ RFGV QR + K + PH+L M+ATPIP
Sbjct: 392 GMAVIDEQHRFGVAQRAQLWKK----------------------NTLPPHILIMTATPIP 429
Query: 700 RTLALALYGDMSLTQITDLPPGRIPIKT 727
RTLA+++YG++ ++ I +LPPGR PI T
Sbjct: 430 RTLAMSVYGNLDISVIDELPPGRKPITT 457
>gi|320536875|ref|ZP_08036868.1| ATP-dependent DNA helicase RecG [Treponema phagedenis F0421]
gi|320146258|gb|EFW37881.1| ATP-dependent DNA helicase RecG [Treponema phagedenis F0421]
Length = 684
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 137/374 (36%), Positives = 196/374 (52%), Gaps = 45/374 (12%)
Query: 378 AKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIH 436
A+ + P+YP GL + LR I AL+ D +P E+ +++GL +H
Sbjct: 139 AEQKILPVYPLTQGLGQAKLRKLIQTALRQYARGIDSELPAEVMEKYGLPTKQQILFFMH 198
Query: 437 QPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG 496
P+ + E + AR LIF+EFF Q T+ K + + + P + E
Sbjct: 199 SPQTVQETEQARHALIFEEFFIFQ------------TELGKRSIQRRGKLPYFSETESEF 246
Query: 497 WSSLTKK---------LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTV 547
SS ++ LL+ LP++LT Q + +E+ DL+ PM RL+QGDVG GKT+
Sbjct: 247 ASSKPRQPVLTQLQQQLLKRLPFALTEDQRTVTAEVNEDLEGTEPMARLIQGDVGSGKTL 306
Query: 548 VAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQ 607
AFLAC+ VI G QAAF+ PTELLA QH E+ KLL + ++A LTG+ K
Sbjct: 307 TAFLACLNVIEKGGQAAFLAPTELLARQHAENAAKLLKPL-----GVRLAFLTGNVKAKG 361
Query: 608 SRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSM 667
+ L G I LV+GTH+L + V + LRLA+VDEQ RFGV+QR
Sbjct: 362 RSHLLAALADGSIDLVLGTHALFSSGVSYKNLRLAVVDEQHRFGVLQR------------ 409
Query: 668 SSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ + G + PH L MSATPIPRTLAL+++GD+ ++ I +P GR P+ T
Sbjct: 410 ----SAIIQKGVEGSKEKKPPHFLMMSATPIPRTLALSVFGDLDISVIKTMPEGRKPVIT 465
Query: 728 YIIEGNEKGYENVY 741
Y+ ++ E VY
Sbjct: 466 YV--ASQAKAEKVY 477
>gi|374597126|ref|ZP_09670130.1| ATP-dependent DNA helicase RecG [Gillisia limnaea DSM 15749]
gi|373871765|gb|EHQ03763.1| ATP-dependent DNA helicase RecG [Gillisia limnaea DSM 15749]
Length = 701
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 163/508 (32%), Positives = 248/508 (48%), Gaps = 84/508 (16%)
Query: 228 CGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGC 287
G +T + L++ FP Y D F I E+ + + I+
Sbjct: 28 LGIHTYQDLINFFPNRYID----------KTRFYKINEL-----QQNTAEVQVVGKIINI 72
Query: 288 EIADTETTSG--DEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCV 345
+ D + S E ++ DSG+ + ++ +K+ R + P++ I GK
Sbjct: 73 KTVDQKRGSRMVAEFID-DSGKMELVWFRGQKWIRENIKINTPYV--IFGK--------- 120
Query: 346 SGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLN-ASLLRDTIARA 404
+ M + H EM L +E +LR +P +YPS L A + I +
Sbjct: 121 TNWFNGMFNMPHPEME------LLEEHQKNLRTAMQP--VYPSTEKLTKAGITNRVINKL 172
Query: 405 LQALPAN-----FDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYL 459
+Q L +D + K+I +E L+ +A IH PK + A+ RL F+E FY+
Sbjct: 173 MQQLFIETGGRFYDTLSKDIKEELKLISRAEAMFNIHFPKSQELLARAQFRLKFEELFYI 232
Query: 460 QLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSA 519
QL L ++ + + + +G + + Y E LP+ LT +Q
Sbjct: 233 QLQLL---IKNMIHKQKIKGFVFEQVGENFGEFYQE-----------HLPFELTGAQKRV 278
Query: 520 ISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEH 579
+ EI DL MNRLLQGDVG GKT+VA ++ + + +G+QA M PTE+L+ QHY
Sbjct: 279 VKEIRSDLGSGAQMNRLLQGDVGSGKTIVALMSMLIALDNGFQACLMAPTEILSVQHYNG 338
Query: 580 LLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSAL 639
L++L + K I LLTGS+ + R I + L+ G+I ++IGTH+L+ +KV+F L
Sbjct: 339 LVELCKEL-----KTSIYLLTGSSKTSKRREIHEKLENGEINILIGTHALLEDKVKFKNL 393
Query: 640 RLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIP 699
LAI+DEQ RFGV QR SKL+ H+ PH+L M+ATPIP
Sbjct: 394 GLAIIDEQHRFGVAQR----SKLW------------------QKNHLPPHILVMTATPIP 431
Query: 700 RTLALALYGDMSLTQITDLPPGRIPIKT 727
RTLA++LYGD+ ++ I +LPPGR IKT
Sbjct: 432 RTLAMSLYGDLDVSVIDELPPGRQEIKT 459
>gi|255535594|ref|YP_003095965.1| ATP-dependent DNA helicase RecG [Flavobacteriaceae bacterium
3519-10]
gi|255341790|gb|ACU07903.1| ATP-dependent DNA helicase RecG [Flavobacteriaceae bacterium
3519-10]
Length = 696
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/355 (36%), Positives = 197/355 (55%), Gaps = 49/355 (13%)
Query: 380 GRPYPIYP-----SKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYM 433
G PIYP SK G+N + +A + LPA + +P + ++ L+ A+
Sbjct: 144 GSLLPIYPGSEKLSKRGINNKFFQVVLAEITRNLPALIQENLPDALMKKLKLISRIHAFY 203
Query: 434 GIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLL-DKYRKPRLNAA 492
IH PK + + A +R+ F+E F+ QLG GL Q K ++ + + K N
Sbjct: 204 HIHFPKDFNHFEHANRRIKFEEAFFFQLGY------GLKKQHHKTSVVGNPFSKIGKN-- 255
Query: 493 YMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLA 552
+G+ ++P+ LT++Q + EI D+K+PV MNRLLQGDVG GKT+VA LA
Sbjct: 256 -FKGFYE------HSMPFELTNAQKRVLKEIRTDMKKPVQMNRLLQGDVGSGKTMVALLA 308
Query: 553 CMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIR 612
+ + +G+Q+ M PTE+LA QH+ + +L +K KI LLTGST ++I
Sbjct: 309 MLIAMDNGFQSCLMAPTEILAQQHFNSIKEL-----TEKTDIKIRLLTGSTKTSDRKIIH 363
Query: 613 KDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMA 672
++L +G++T+++GTH+++ + V F L LAI+DEQ RFGV QR R +K
Sbjct: 364 EELLSGELTILVGTHAVLEDIVRFRNLGLAIIDEQHRFGVAQRARLWAK----------- 412
Query: 673 MVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+APH+L M+ATPIPRTLA++ Y D+ ++ I ++P GR PI T
Sbjct: 413 -----------NKIAPHILVMTATPIPRTLAMSFYSDLDVSVIDEMPVGRKPIIT 456
>gi|409997460|ref|YP_006751861.1| ATP-dependent DNA helicase recG [Lactobacillus casei W56]
gi|406358472|emb|CCK22742.1| ATP-dependent DNA helicase recG [Lactobacillus casei W56]
Length = 721
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 167/541 (30%), Positives = 247/541 (45%), Gaps = 101/541 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
++ +PG+ + L + G +T+R LL +FP Y DL+ +
Sbjct: 49 VTVLPGVGPKREAGLASLGIHTIRDLLFYFPYRYDDLKVKDL------------------ 90
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNID--------SGQKKKIYLHLKKFFRGT 322
E AD E + +V D + + L +++
Sbjct: 91 ----------------AEAADQEKLTVKGIVVTDPVISRFGPHRSRVNVKLQIERSVILV 134
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+LK + ++G+ + GK A R + + I + +D S+ A
Sbjct: 135 TFFNQPWLKD---RFQMGDEAAIFGKWDAKRRS----LTGMKILATQSQDQPSMAA---- 183
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
IY + L D I A + N D VP I + + L+ G+H P
Sbjct: 184 --IYTVNKNVRMGTLLDLIKAAWERDQQNINDLVPASIREHYRLMSDAQLVHGMHFPDTP 241
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
EA AR+ +F EFF QL Q L+ L GL Y L A
Sbjct: 242 AEAKAARRTGVFREFFLFQLQ--IQALKQLNAN-SSNGLAIPYDNQALRA---------- 288
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
L+ LP++LT++Q ++EI D+++P MNRLLQGDVG GKTVVA + + +G+
Sbjct: 289 --LIATLPFALTNAQKRVVNEICADMRRPNHMNRLLQGDVGSGKTVVAAIVLYAAVTAGF 346
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
QAA MVPTE+LA QH+ L KL + K+ LLTGST K+ R + +L+ G +
Sbjct: 347 QAALMVPTEVLAEQHFAKLTKLFKDFP-----VKLGLLTGSTSTKKRRELLSELRDGRLN 401
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
L+IGTH+LI + V+F AL L ++DEQ RFGV QR K
Sbjct: 402 LIIGTHALIQKGVDFHALGLVVIDEQHRFGVNQRKILQEK-------------------- 441
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVY 741
P +L+M+ATPIPRTLA+ YG+M ++ I +LP GR PI T + N+ + VY
Sbjct: 442 ---GQKPDLLSMTATPIPRTLAITAYGEMDVSTIDELPAGRKPIATMWLRKNQ--IDQVY 496
Query: 742 K 742
+
Sbjct: 497 R 497
>gi|383767281|ref|YP_005446262.1| ATP-dependent DNA helicase RecG [Phycisphaera mikurensis NBRC
102666]
gi|381387549|dbj|BAM04365.1| ATP-dependent DNA helicase RecG [Phycisphaera mikurensis NBRC
102666]
Length = 741
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 171/557 (30%), Positives = 250/557 (44%), Gaps = 105/557 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-----DLDDGQYFI 261
L +S + G+ L LE G TL L+ H P + D + D+ +G
Sbjct: 13 LSTPVSALRGVGPHLAGALEQMGLRTLSDLIRHLPHRHEDEHATETIASLADVPEGAVAS 72
Query: 262 FIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRG 321
G + + R + G F E T D I ++ K G
Sbjct: 73 AEGVVDACRSVGHGRKGRF------------EATLSDSTGTIKLTWFNAAWMR-GKLPAG 119
Query: 322 TRFTSIPFLKSIEGK-HKVGEFVCVSGKV-------------------RAMRSNNHYEMR 361
TR ++GK + G ++ ++G R N + R
Sbjct: 120 TRV-------RVQGKIKRYGPYLQMTGPKWATLADEDEDEGGGEPTIPRTAAGNGLFSPR 172
Query: 362 EYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEIT 420
D D LR P+YP+ + + L I RA++A+ DPVP I
Sbjct: 173 SAES---ADGDAPRLR------PVYPATERIPSDRLASLIERAVEAVVDQIEDPVPPAIV 223
Query: 421 QEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGL 480
+ + L +AY IH P DE AR+RL F+E LQLG ++
Sbjct: 224 EHHRMPTLAEAYRRIHAPADRDEIAGARRRLAFNELLVLQLG----------VAVKRAHT 273
Query: 481 LDKYRKPRL--NAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQ 538
K R PRL +AA +EG + L LP+ +T++Q +EI DL +P PMNRLLQ
Sbjct: 274 RLKLRAPRLVASAALLEGIAEL-------LPFEMTAAQKRVTAEITADLARPFPMNRLLQ 326
Query: 539 GDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIAL 598
GDVG GKT VA A + +G QAA M PT LLA QH++ + K+L+ ++ L
Sbjct: 327 GDVGAGKTAVALHAMLIAQAAGKQAALMAPTALLAEQHHQAIEKMLEGT-----GVRVGL 381
Query: 599 LTGSTPVKQSRMIRKDLQTGD----ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQ 654
+T + + L D + +V+GTH+L++EK+ F L LA++DEQ RFGV Q
Sbjct: 382 VTAHRRQDVEAVAGRTLDGNDPSRRVDVVVGTHALLSEKLAFRDLGLAVIDEQHRFGVRQ 441
Query: 655 RGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQ 714
R A + S G+ +PHVL M+ATPIPRTL+L L GD+ ++
Sbjct: 442 R----------------AALRSAGN------ESPHVLVMTATPIPRTLSLTLLGDLDVST 479
Query: 715 ITDLPPGRIPIKTYIIE 731
I +LPPGRIP+ + +++
Sbjct: 480 IDELPPGRIPVASRVVD 496
>gi|402303438|ref|ZP_10822533.1| ATP-dependent DNA helicase RecG [Selenomonas sp. FOBRC9]
gi|400378682|gb|EJP31534.1| ATP-dependent DNA helicase RecG [Selenomonas sp. FOBRC9]
Length = 688
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 162/530 (30%), Positives = 248/530 (46%), Gaps = 83/530 (15%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFIG 264
L+ I+ V G+ + L G T+ LL ++PR Y D DL G +G
Sbjct: 3 LEDGINKVRGVGIQKAAALRRLGIETVSDLLTYYPRAYEDQSRITRIADLRPGTRATIVG 62
Query: 265 EI--ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGT 322
I + R + F+ L +VG +G + ++ + +
Sbjct: 63 VIHTVVERPTRR-RGFTVLTALVGD----------------GTGCAQAVWFNQR------ 99
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVR-AMRSNNHYEMREYN-IDVLKDEDDLSLRAKG 380
FLKS K + G + +SGK A + + ++ L E+ + R
Sbjct: 100 ------FLKS---KLREGRRIFLSGKADYAYGGGGQLALTQITALEFLGAEESPASRLG- 149
Query: 381 RPYPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPK 439
PIY + GL LR + AL+ A + +P + E+GL+ DA+ IH PK
Sbjct: 150 -ILPIYAATEGLTQKQLRQMMEYALRETAAELTETLPDAVLTEYGLVGRADAFRRIHFPK 208
Query: 440 HIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSS 499
+E AR+RL F+E + +Q G L + +Q G+ + R+ A
Sbjct: 209 RAEELSAARRRLAFEELYLIQCGLLALKKRSVESQ---RGIAHRENGARVAA-------- 257
Query: 500 LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
+L ALP++LT Q + E+ D++ P+PM RL+QGDVG GKT +A LA ++ + S
Sbjct: 258 ----VLEALPFTLTEDQQTVWREVARDMESPLPMRRLVQGDVGSGKTAIALLALVKTVES 313
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
G Q AFM PTE+LA QHY++L +LL + ++A L+G K L +
Sbjct: 314 GRQGAFMAPTEILARQHYDYLQELLTPL-----GIRVAFLSGRLAKKARTETDAALAAHE 368
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
+ +V+GTH+LI + V F+AL L + DEQ RFGV QR K
Sbjct: 369 VDIVVGTHALIEDHVAFAALGLVVTDEQHRFGVAQRSALEKK------------------ 410
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYI 729
+ P VL M+ATPIPRT+ L +YGD+ +++I LPPGR I+T++
Sbjct: 411 ----SEVTPDVLVMTATPIPRTMTLTVYGDLDVSRIEHLPPGRRAIRTFL 456
>gi|238852577|ref|ZP_04642987.1| ATP-dependent DNA helicase RecG [Lactobacillus gasseri 202-4]
gi|238834723|gb|EEQ26950.1| ATP-dependent DNA helicase RecG [Lactobacillus gasseri 202-4]
Length = 679
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 168/523 (32%), Positives = 256/523 (48%), Gaps = 99/523 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGEIIS- 268
++ + G+ + L G T+ LL +FP Y DL+ +D ++DGQ + G +++
Sbjct: 12 VTELKGVGAKTATALAGLGINTIYDLLFYFPFRYDDLETIPLDQIEDGQKVLLKGIVVTD 71
Query: 269 ---SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFT 325
SR SF + +++ ++ F
Sbjct: 72 PFVSRFGYRKTRLSF------------KMKIDHDIIMVN-------------------FF 100
Query: 326 SIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPI 385
+ P+LK K + G+ V V GK + R + + + + K E + PI
Sbjct: 101 NQPWLKD---KVESGKEVAVYGKYQVARQS----LSGFKLVAEKKESGFA--------PI 145
Query: 386 YPSKGGLNASLLRDTIARALQ-ALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
Y L + L+ I AL+ LP + +P + +++ LL +H PK+ +EA
Sbjct: 146 YSVNRHLKQNKLQKLIDLALEEVLPEVGETIPAALREKYRLLSDQILVEKMHHPKNGNEA 205
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKE--GLLDKYRKPRLNAAYMEGWSSLTK 502
LAR+ IF EFF Q+ +L Q+L +Q +++ G+ +Y + K
Sbjct: 206 KLARRSAIFREFFLFQV-QLAQLL----SQRDEDVPGMEKRYD------------LAAVK 248
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
+L++A+P+ L+ Q ++EI DL P M RLLQGDVG GKTVVA A I +G+Q
Sbjct: 249 ELIQAIPFELSDDQKKVVNEIFADLHSPRQMKRLLQGDVGSGKTVVAVFAIYATITAGFQ 308
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
AA MVPTE+LA QH+ + +LL + ++ALLTG T + + I ++L G I +
Sbjct: 309 AALMVPTEILAQQHFAKVDELLRPL-----GVRVALLTGDTKELEKKEIYRELADGTINV 363
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
VIGTH+LI + V F L L I+DEQ RFGV QR T + G
Sbjct: 364 VIGTHALIQKDVHFKNLGLVIIDEQHRFGVNQRN--------TLIKKG------------ 403
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
+AP VLAM+ATPIPRTLAL +YGDM++++I LP GR P+
Sbjct: 404 ---VAPDVLAMTATPIPRTLALTVYGDMAVSEIHHLPKGRKPV 443
>gi|116495097|ref|YP_806831.1| ATP-dependent DNA helicase RecG [Lactobacillus casei ATCC 334]
gi|385820316|ref|YP_005856703.1| DNA helicase RecG [Lactobacillus casei LC2W]
gi|385823510|ref|YP_005859852.1| DNA helicase RecG [Lactobacillus casei BD-II]
gi|116105247|gb|ABJ70389.1| ATP-dependent DNA helicase RecG [Lactobacillus casei ATCC 334]
gi|327382643|gb|AEA54119.1| DNA helicase RecG [Lactobacillus casei LC2W]
gi|327385837|gb|AEA57311.1| DNA helicase RecG [Lactobacillus casei BD-II]
Length = 718
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 167/541 (30%), Positives = 247/541 (45%), Gaps = 101/541 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
++ +PG+ + L + G +T+R LL +FP Y DL+ +
Sbjct: 46 VTVLPGVGPKREAGLASLGIHTIRDLLFYFPYRYDDLKVKDL------------------ 87
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNID--------SGQKKKIYLHLKKFFRGT 322
E AD E + +V D + + L +++
Sbjct: 88 ----------------AEAADQEKLTVKGIVVTDPVISRFGPHRSRVNVKLQIERSVILV 131
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+LK + ++G+ + GK A R + + I + +D S+ A
Sbjct: 132 TFFNQPWLKD---RFQMGDEAAIFGKWDAKRRS----LTGMKILATQSQDQPSMAA---- 180
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
IY + L D I A + N D VP I + + L+ G+H P
Sbjct: 181 --IYTVNKNVRMGTLLDLIKAAWERDQQNINDLVPASIREHYRLMSDAQLVHGMHFPDTP 238
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
EA AR+ +F EFF QL Q L+ L GL Y L A
Sbjct: 239 AEAKAARRTGVFREFFLFQLQ--IQALKQLNAN-SSNGLAIPYDNQALRA---------- 285
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
L+ LP++LT++Q ++EI D+++P MNRLLQGDVG GKTVVA + + +G+
Sbjct: 286 --LIATLPFALTNAQKRVVNEICADMRRPNHMNRLLQGDVGSGKTVVAAIVLYAAVTAGF 343
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
QAA MVPTE+LA QH+ L KL + K+ LLTGST K+ R + +L+ G +
Sbjct: 344 QAALMVPTEVLAEQHFAKLTKLFKDFP-----VKLGLLTGSTSTKKRRELLSELRDGRLN 398
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
L+IGTH+LI + V+F AL L ++DEQ RFGV QR K
Sbjct: 399 LIIGTHALIQKGVDFHALGLVVIDEQHRFGVNQRKILQEK-------------------- 438
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVY 741
P +L+M+ATPIPRTLA+ YG+M ++ I +LP GR PI T + N+ + VY
Sbjct: 439 ---GQKPDLLSMTATPIPRTLAITAYGEMDVSTIDELPAGRKPIATMWLRKNQ--IDQVY 493
Query: 742 K 742
+
Sbjct: 494 R 494
>gi|163814174|ref|ZP_02205566.1| hypothetical protein COPEUT_00328 [Coprococcus eutactus ATCC 27759]
gi|158450623|gb|EDP27618.1| ATP-dependent DNA helicase RecG [Coprococcus eutactus ATCC 27759]
Length = 678
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 154/537 (28%), Positives = 254/537 (47%), Gaps = 101/537 (18%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGE 265
+L I + G+ + + G YT+ LL ++PRTY ++ +D+++ Q
Sbjct: 2 VLGDSIKTIKGIGDKTAAAMSKLGIYTVSDLLMYYPRTYISYEDP-VDIENLQ------- 53
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGT--- 322
GM+ + V++ + EV + +Y K F GT
Sbjct: 54 ----TGMRQS-----VRVMINSRV---------EVRKVRGLTISIVY---AKDFSGTIKL 92
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVR------AMRSNNHYEMREYNIDVLKDEDDLSL 376
+ + PFL++ +G+ SG+V M +Y +Y+
Sbjct: 93 MWFNCPFLRNF---FHIGQEFVFSGEVSYKSGMMTMTQPEYYTPDKYS------------ 137
Query: 377 RAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIH 436
P+Y G+ + ++ AL A D +P+++ E+G++ L +A IH
Sbjct: 138 ELTNVWQPVYTVTPGITSKTIQKAARNALPAASGLVDYLPEDVLSEYGIMDLPEAVASIH 197
Query: 437 QPKHIDEADLARKRLIFDEF--FYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYM 494
P LA KR+ FDEF F + RL G YR + +
Sbjct: 198 FPADEYHLKLAVKRIAFDEFYGFISDMHRLKSDFAG-------------YRNECVISCDE 244
Query: 495 EGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACM 554
E ++ + L ++LT++Q++A+ +++ D+ MNRL+QGDVG GKT+VA +
Sbjct: 245 E-----VRRFIEKLSFTLTNAQMNAVRDMLEDMSSDHVMNRLIQGDVGSGKTIVAAVGLF 299
Query: 555 EVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKD 614
SG+Q M PTE+LA QHY+ L + + + + + LLTGS VK+ R++ +D
Sbjct: 300 AAAVSGWQGVIMAPTEVLAVQHYKEL-----HAQFEPYGISVGLLTGSMTVKEKRLMYQD 354
Query: 615 LQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMV 674
++ GD+++++GTH+LI +KVE++ L L + DEQ RFGV QR + K +
Sbjct: 355 IKNGDVSVIVGTHALIQDKVEYNRLGLVVTDEQHRFGVKQREKLTEKGGH---------- 404
Query: 675 NSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
PH L MSATPIPRTLA+ +YGD+ ++ I +LP GRIPIK +++
Sbjct: 405 -------------PHTLVMSATPIPRTLAIIMYGDLDISVIDELPAGRIPIKNCVVD 448
>gi|313115462|ref|ZP_07800929.1| ATP-dependent DNA helicase RecG [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310622229|gb|EFQ05717.1| ATP-dependent DNA helicase RecG [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 686
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 168/552 (30%), Positives = 248/552 (44%), Gaps = 108/552 (19%)
Query: 197 LPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYAD------LQNA 250
+P+E D + + G+ + + E G TL LL H+PR Y D + A
Sbjct: 1 MPAENHTTLTPDTPVRYLKGVGPKTAERFEKLGIVTLADLLCHYPRRYIDFTKPYSIAEA 60
Query: 251 QIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSG---- 306
D++ + E+ + G + +E I T+GD+V +++
Sbjct: 61 PTDVE----CVVRAEVFAKPGGRILPGGRRMERI----------TAGDDVSSLEITWFNN 106
Query: 307 --QKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYN 364
+K+ L + +F+G + G +R N E
Sbjct: 107 PYAAQKLQLGQEYYFQG---------------------IVTGGMLRRQMVNPQVRTAE-- 143
Query: 365 IDVLKDEDDLSLRAKGRPY-PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEF 423
+ K P+ +YP GL ++ + + + L DP+P E+ ++
Sbjct: 144 ------------QIKASPFEAVYPQTEGLTSNAIAKCVRQLLPHAELLPDPLPPEMLAKY 191
Query: 424 GLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDK 483
LL DA IH P ++A AR+RLI++E LQLG G L D
Sbjct: 192 RLLSKADAVRAIHCPATEEQAYAARRRLIYEELLVLQLGIGRMKNRGAAATGAPMQLAD- 250
Query: 484 YRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGC 543
P L W+SL P+S T +Q A+SEI+ D+ MNRLLQGDVG
Sbjct: 251 ---PSLF------WASL--------PFSPTGAQRRAVSEILADMAGETSMNRLLQGDVGS 293
Query: 544 GKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGST 603
GKT+VA A I +GYQAA + PTE+LATQH E L ++L ++ALLTG
Sbjct: 294 GKTLVAAAAIWACIRAGYQAALLAPTEILATQHAEGLNRMLAPFGM-----RVALLTGGM 348
Query: 604 PVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLY 663
R ++ + LV+GTH++++E VEF+ L LA++DEQ RFGV QRG K
Sbjct: 349 KAAARRTTLAAIRNDEADLVVGTHAILSEGVEFARLGLAVIDEQHRFGVRQRGMLAEK-- 406
Query: 664 YTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRI 723
PH+L MSATPIPRTL L +YGD+ ++ + +LPPGR
Sbjct: 407 ---------------------AANPHLLVMSATPIPRTLGLLIYGDLDISILDELPPGRT 445
Query: 724 PIKTYIIEGNEK 735
P+KT I G ++
Sbjct: 446 PVKTRCITGKKR 457
>gi|188997024|ref|YP_001931275.1| ATP-dependent DNA helicase RecG [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932091|gb|ACD66721.1| ATP-dependent DNA helicase RecG [Sulfurihydrogenibium sp. YO3AOP1]
Length = 799
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/376 (36%), Positives = 202/376 (53%), Gaps = 61/376 (16%)
Query: 381 RPYPIYPSKG-------GLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYM 433
R P+Y +G G + LR + + ++ + D +P +I ++ L A
Sbjct: 230 RIAPVYSLRGDSSVKTTGQTLNHLRRGMYKIVEKFSSVKDYMPDDILSKYNFPPLSKAIK 289
Query: 434 GIHQPKHIDEADL-------ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKY-- 484
+H P+ + DL +KRLIFDE F LQL + Y + LL K+
Sbjct: 290 NVHFPEDSFDIDLLNNFQDIHQKRLIFDELFLLQLAQKY-----------RRYLLQKHPS 338
Query: 485 RKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCG 544
K ++ ++ + + LP+ LT Q+ I EI+ D+++ +PMNR++QGDVG G
Sbjct: 339 YKISVDPNFLTNFQ-------KNLPFELTQVQIRTIKEILADIQKEIPMNRMVQGDVGSG 391
Query: 545 KTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTP 604
KTVVA A + V +GYQAA M PTE+LA QHY + L N +D +IA+LTGS
Sbjct: 392 KTVVAATASLAVALNGYQAAVMAPTEILAWQHYHNFKNFLKNYLKD---YEIAILTGSMK 448
Query: 605 VKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYY 664
+ + + K ++ G+I ++IGTH+L+ EK++F L LA+VDEQ RFGV QR
Sbjct: 449 TSEKKQVYKAVELGEIKILIGTHALLEEKLKFKNLALAVVDEQHRFGVEQRK-------- 500
Query: 665 TSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIP 724
A++ PHVL M+ATPIPRTLALA YGD+ ++++ LP GR P
Sbjct: 501 -------ALIERSDK-------MPHVLVMTATPIPRTLALANYGDLDISKLDQLPKGRKP 546
Query: 725 IKTYII--EGNEKGYE 738
+KT ++ + EK YE
Sbjct: 547 VKTVLLFDDEREKMYE 562
>gi|421858987|ref|ZP_16291236.1| RecG-like helicase [Paenibacillus popilliae ATCC 14706]
gi|410831506|dbj|GAC41673.1| RecG-like helicase [Paenibacillus popilliae ATCC 14706]
Length = 672
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/353 (37%), Positives = 189/353 (53%), Gaps = 44/353 (12%)
Query: 380 GRPYPIYPSKGGLNASLLRDTIARALQAL-PANFDPVPKEITQEFGLLCLFDAYMGIHQP 438
G P+Y G + + +R TIA+ALQ A +P+P E+ + + LL A +H P
Sbjct: 130 GTLQPVYSIGGKITQAWMRKTIAQALQQFGEAITEPLPPEMLRCYRLLPRKQAVRAMHLP 189
Query: 439 KHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWS 498
++E AR+RL+++E QL + L + R A+M +
Sbjct: 190 HDVEEGKQARRRLVYEELLLFQL------------KLHAFRALTRQRSD--GVAFMVD-N 234
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
+ ++ R+LP+ LT+ Q AI++I+ D++QP MNRLLQGDVG GKTVVA A +
Sbjct: 235 TTVRQFTRSLPFELTAGQKQAITDILHDMRQPSCMNRLLQGDVGSGKTVVAATALYAAVR 294
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+GYQ A MVPTE+LA QH L KL + H ++ LLTGS ++ R + LQ G
Sbjct: 295 AGYQGALMVPTEILAEQHMRSLSKLF-----EPHGIEVGLLTGSLTERKRRDVLAALQMG 349
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
I +++GTH+LI E V + L L I DEQ RFGV QR K +
Sbjct: 350 MIDIMVGTHALIQEDVHYRKLGLVITDEQHRFGVNQRSILRRKGW--------------- 394
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ ++GD+ ++ I + P GR PIKTY ++
Sbjct: 395 --------NPDVLMMTATPIPRTLAITVFGDLDVSSIRERPAGRKPIKTYWVK 439
>gi|383764540|ref|YP_005443522.1| ATP-dependent DNA helicase RecG [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381384808|dbj|BAM01625.1| ATP-dependent DNA helicase RecG [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 862
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 172/526 (32%), Positives = 253/526 (48%), Gaps = 82/526 (15%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFIG 264
L+K ++ +PG+ QL G + LL H P Y D + L G+ I
Sbjct: 180 LEKRVTILPGVGDSTAEQLARLGIVKVVDLLWHLPHRYDDYSQMRTIAQLRPGEQATIIA 239
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
+ R K G + + ++ I+G D+ T LH
Sbjct: 240 NLWDVRERKVGINRTVVQAILG----DSTGT-----------------LH---------- 268
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ + K + + K G + SGKV + + + V +D D+ + A GR P
Sbjct: 269 -ATWWNKWVIRQLKPGSTLRFSGKV-----GLYMGQKTLDNPVFEDVDEERV-ATGRLSP 321
Query: 385 IYPSKGGLNASLLRDTIARALQALPANF--DPVPKEITQEFGLLCLFDAYMGIHQPKHID 442
+Y GL + LR I ++ A+F DP+P+ I + +GLL L A IH P +
Sbjct: 322 VYRLTEGLTNNRLRSLIYDVIEGY-AHFLPDPLPESIREAYGLLDLPTALAQIHFPDSHE 380
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
+ + AR+RL F+E FY+QLG Q L Q E L P + A +
Sbjct: 381 QLEAARRRLAFEELFYIQLG--VQQRRALLRQAAAEPL------PLSDEALAQ------- 425
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
+ LP+ LT++Q + EI DL + VPM RL+QGDVG GKTV+A A + G Q
Sbjct: 426 -FCQLLPFELTAAQRRVLEEIRSDLARAVPMTRLVQGDVGSGKTVIAAAAMWAAVVQGAQ 484
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKP-KIALLTGSTPVKQSRMIRKDLQTGDIT 621
AA + PT++LA QH+ + +LL ++ +P ++ALLTG L +G I
Sbjct: 485 AALLAPTQILAEQHHRGISQLLSQLQRPDGEPVRVALLTGRVGGAAREETLAGLASGAID 544
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+V+GT +LI E V F+ L L +VDEQ RFGV QRG +K SD
Sbjct: 545 IVVGTTALIQEGVAFNRLALVVVDEQHRFGVEQRGALRTK--------------SD---- 586
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PH+L MSATPIPR+LAL +YGD+ +++I ++PPGR P+KT
Sbjct: 587 ----IQPHLLVMSATPIPRSLALTIYGDLDVSRIDEIPPGRTPVKT 628
>gi|191638602|ref|YP_001987768.1| ATP-dependent DNA helicase RecG [Lactobacillus casei BL23]
gi|190712904|emb|CAQ66910.1| ATP-dependent DNA helicase, RecG [Lactobacillus casei BL23]
Length = 679
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 167/541 (30%), Positives = 247/541 (45%), Gaps = 101/541 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
++ +PG+ + L + G +T+R LL +FP Y DL+ +
Sbjct: 7 VTVLPGVGPKREAGLASLGIHTIRDLLFYFPYRYDDLKVKDL------------------ 48
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNID--------SGQKKKIYLHLKKFFRGT 322
E AD E + +V D + + L +++
Sbjct: 49 ----------------AEAADQEKLTVKGIVVTDPVISRFGPHRSRVNVKLQIERSVILV 92
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+LK + ++G+ + GK A R + + I + +D S+ A
Sbjct: 93 TFFNQPWLKD---RFQMGDEAAIFGKWDAKRRS----LTGMKILATQSQDQPSMAA---- 141
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
IY + L D I A + N D VP I + + L+ G+H P
Sbjct: 142 --IYTVNKNVRMGTLLDLIKAAWERDQQNINDLVPASIREHYRLMSDAQLVHGMHFPDTP 199
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
EA AR+ +F EFF QL Q L+ L GL Y L A
Sbjct: 200 AEAKAARRTGVFREFFLFQLQ--IQALKQLNAN-SSNGLAIPYDNQALRA---------- 246
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
L+ LP++LT++Q ++EI D+++P MNRLLQGDVG GKTVVA + + +G+
Sbjct: 247 --LIATLPFALTNAQKRVVNEICADMRRPNHMNRLLQGDVGSGKTVVAAIVLYAAVTAGF 304
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
QAA MVPTE+LA QH+ L KL + K+ LLTGST K+ R + +L+ G +
Sbjct: 305 QAALMVPTEVLAEQHFAKLTKLFKDF-----PVKLGLLTGSTSTKKRRELLSELRDGRLN 359
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
L+IGTH+LI + V+F AL L ++DEQ RFGV QR K
Sbjct: 360 LIIGTHALIQKGVDFHALGLVVIDEQHRFGVNQRKILQEK-------------------- 399
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVY 741
P +L+M+ATPIPRTLA+ YG+M ++ I +LP GR PI T + N+ + VY
Sbjct: 400 ---GQKPDLLSMTATPIPRTLAITAYGEMDVSTIDELPAGRKPIATMWLRKNQ--IDQVY 454
Query: 742 K 742
+
Sbjct: 455 R 455
>gi|227534888|ref|ZP_03964937.1| DNA helicase RecG [Lactobacillus paracasei subsp. paracasei ATCC
25302]
gi|227187644|gb|EEI67711.1| DNA helicase RecG [Lactobacillus paracasei subsp. paracasei ATCC
25302]
Length = 698
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 167/541 (30%), Positives = 247/541 (45%), Gaps = 101/541 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
++ +PG+ + L + G +T+R LL +FP Y DL+ +
Sbjct: 26 VTVLPGVGPKREAGLASLGIHTIRDLLFYFPYRYDDLKVKDL------------------ 67
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNID--------SGQKKKIYLHLKKFFRGT 322
E AD E + +V D + + L +++
Sbjct: 68 ----------------AEAADQEKLTVKGIVVTDPVISRFGPHRSRVNVKLQIERSVILV 111
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+LK + ++G+ + GK A R + + I + +D S+ A
Sbjct: 112 TFFNQPWLKD---RFQMGDEAAIFGKWDAKRRS----LTGMKILATQSQDQPSMAA---- 160
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
IY + L D I A + N D VP I + + L+ G+H P
Sbjct: 161 --IYTVNKNVRMGTLLDLIKAAWERDQQNINDLVPASIREHYRLMSDAQLVHGMHFPDTP 218
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
EA AR+ +F EFF QL Q L+ L GL Y L A
Sbjct: 219 AEAKAARRTGVFREFFLFQLQ--IQALKQLNAN-SSNGLAIPYDNQALRA---------- 265
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
L+ LP++LT++Q ++EI D+++P MNRLLQGDVG GKTVVA + + +G+
Sbjct: 266 --LIATLPFALTNAQKRVVNEICADMRRPNHMNRLLQGDVGSGKTVVAAIVLYAAVTAGF 323
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
QAA MVPTE+LA QH+ L KL + K+ LLTGST K+ R + +L+ G +
Sbjct: 324 QAALMVPTEVLAEQHFAKLTKLFKDF-----PVKLGLLTGSTSTKKRRELLSELRDGRLN 378
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
L+IGTH+LI + V+F AL L ++DEQ RFGV QR K
Sbjct: 379 LIIGTHALIQKGVDFHALGLVVIDEQHRFGVNQRKILQEK-------------------- 418
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVY 741
P +L+M+ATPIPRTLA+ YG+M ++ I +LP GR PI T + N+ + VY
Sbjct: 419 ---GQKPDLLSMTATPIPRTLAITAYGEMDVSTIDELPAGRKPIATMWLRKNQ--IDQVY 473
Query: 742 K 742
+
Sbjct: 474 R 474
>gi|366085809|ref|ZP_09452294.1| ATP-dependent DNA helicase RecG [Lactobacillus zeae KCTC 3804]
Length = 679
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 173/548 (31%), Positives = 248/548 (45%), Gaps = 107/548 (19%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L +S +PG+ + L + G +T+ +L +FP Y DL+ +
Sbjct: 3 LTDPVSVLPGVGPKREEGLASLGIHTVGDVLFYFPYRYDDLKVKDL-------------- 48
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNID--------SGQKKKIYLHLKKF 318
E AD E + VV D + + L +++
Sbjct: 49 --------------------AEAADQEKLTIKGVVVADPVISRFGPHRSRVNVKLQVERS 88
Query: 319 FRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRA 378
F + P+LK + ++G+ + GK A R + + I + +D S+ A
Sbjct: 89 VILVTFFNQPWLKD---RFQMGDEAAIFGKWDAQRRS----LTGMKILATQSQDQPSMAA 141
Query: 379 KGRPYPIYPSKGGLNASLLRDTI----ARALQALPANFDPVPKEITQEFGLLCLFDAYMG 434
IY + L D I AR Q + D +P I + + L+ G
Sbjct: 142 ------IYTVNKNIRMGTLLDLIKAAWARDHQHI---HDLIPASIREHYRLMTDEQLVHG 192
Query: 435 IHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYM 494
+H P EA AR+ +F EFF QL Q L+ L T GL Y L A
Sbjct: 193 MHFPDTPQEAKAARRTGVFREFFLFQLQ--IQALKQLNTN-SSNGLAIPYDNQALRA--- 246
Query: 495 EGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACM 554
L+ LP+SLT++Q ++EI D+++P MNRLLQGDVG GKT+VA +
Sbjct: 247 ---------LIATLPFSLTNAQKRVVNEICADMRRPNHMNRLLQGDVGSGKTIVAAIVLY 297
Query: 555 EVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKD 614
+ +GYQAA MVPTE+LA QH L KL N K+ LLTGST K+ R + D
Sbjct: 298 AAVTAGYQAALMVPTEVLAEQHSAKLQKLFANF-----PVKLGLLTGSTTAKRRRELLTD 352
Query: 615 LQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMV 674
L+ G + L+IGTH+LI + V+F AL L ++DEQ RFGV QR K
Sbjct: 353 LRMGTLNLIIGTHALIQKGVDFKALGLVVIDEQHRFGVNQRKVLQEK------------- 399
Query: 675 NSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
P +L+M+ATPIPRTLA+ YG+M ++ I +LP GR PI T + N+
Sbjct: 400 ----------GQKPDLLSMTATPIPRTLAITAYGEMDVSTIDELPAGRKPITTTWLRKNQ 449
Query: 735 KGYENVYK 742
G VY+
Sbjct: 450 VG--QVYR 455
>gi|417993130|ref|ZP_12633480.1| ATP-dependent DNA helicase [Lactobacillus casei CRF28]
gi|417996482|ref|ZP_12636761.1| ATP-dependent DNA helicase [Lactobacillus casei M36]
gi|418014550|ref|ZP_12654146.1| ATP-dependent DNA helicase [Lactobacillus casei Lpc-37]
gi|410532042|gb|EKQ06753.1| ATP-dependent DNA helicase [Lactobacillus casei CRF28]
gi|410535328|gb|EKQ09953.1| ATP-dependent DNA helicase [Lactobacillus casei M36]
gi|410553598|gb|EKQ27600.1| ATP-dependent DNA helicase [Lactobacillus casei Lpc-37]
Length = 679
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 167/541 (30%), Positives = 247/541 (45%), Gaps = 101/541 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
++ +PG+ + L + G +T+R LL +FP Y DL+ +
Sbjct: 7 VTVLPGVGPKREAGLASLGIHTIRDLLFYFPYRYDDLKVKDL------------------ 48
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNID--------SGQKKKIYLHLKKFFRGT 322
E AD E + +V D + + L +++
Sbjct: 49 ----------------AEAADQEKLTVKGIVVTDPVISRFGPHRSRVNVKLQIERSVILV 92
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+LK + ++G+ + GK A R + + I + +D S+ A
Sbjct: 93 TFFNQPWLKD---RFQMGDEAAIFGKWDAKRRS----LTGMKILATQSQDQPSMAA---- 141
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
IY + L D I A + N D VP I + + L+ G+H P
Sbjct: 142 --IYTVNKNVRMGTLLDLIKTAWERDQQNINDLVPASIREHYRLMSDAQLVHGMHFPDTP 199
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
EA AR+ +F EFF QL Q L+ L GL Y L A
Sbjct: 200 AEAKAARRTGVFREFFLFQLQ--IQALKQLNAN-SSNGLAIPYDNQALRA---------- 246
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
L+ LP++LT++Q ++EI D+++P MNRLLQGDVG GKTVVA + + +G+
Sbjct: 247 --LIATLPFALTNAQKRVVNEICADMRRPNHMNRLLQGDVGSGKTVVAAIVLYAAVTAGF 304
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
QAA MVPTE+LA QH+ L KL + K+ LLTGST K+ R + +L+ G +
Sbjct: 305 QAALMVPTEVLAEQHFAKLTKLFKDF-----PVKLGLLTGSTSTKKRRELLSELRDGRLN 359
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
L+IGTH+LI + V+F AL L ++DEQ RFGV QR K
Sbjct: 360 LIIGTHALIQKGVDFHALGLVVIDEQHRFGVNQRKILQEK-------------------- 399
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVY 741
P +L+M+ATPIPRTLA+ YG+M ++ I +LP GR PI T + N+ + VY
Sbjct: 400 ---GQKPDLLSMTATPIPRTLAITAYGEMDVSTIDELPAGRKPIATTWLRKNQ--IDQVY 454
Query: 742 K 742
+
Sbjct: 455 R 455
>gi|320530666|ref|ZP_08031712.1| ATP-dependent DNA helicase RecG [Selenomonas artemidis F0399]
gi|320137074|gb|EFW29010.1| ATP-dependent DNA helicase RecG [Selenomonas artemidis F0399]
Length = 688
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 160/530 (30%), Positives = 250/530 (47%), Gaps = 83/530 (15%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFIG 264
L+ ++ V G+ + L G T+ LL ++PR Y D DL G +G
Sbjct: 3 LEDNVNKVRGVGVQKAAALRRLGIETVSDLLTYYPRAYEDQSRITRIADLRSGTRATVVG 62
Query: 265 EI--ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGT 322
I + R + F+ L ++G +G + ++ + +
Sbjct: 63 VIQTVVERPTRR-RGFTVLTALIGD----------------GTGYAQAVWFNQR------ 99
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVR-AMRSNNHYEMREY-NIDVLKDEDDLSLRAKG 380
FLKS K + G + ++GK A + + +++ L E+ + R
Sbjct: 100 ------FLKS---KLREGRRIFLTGKADYAYGGGGQLALTQITSLEFLGAEESPASRLG- 149
Query: 381 RPYPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPK 439
PIY + GL LR +A AL+ N + +P + E+GL+ DA+ IH PK
Sbjct: 150 -ILPIYAATEGLTQKQLRQMMAYALRETAENLTETLPDVVRTEYGLVRRADAFRRIHFPK 208
Query: 440 HIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSS 499
+E AR+RL F+E + +Q G L + +Q G+ R+ A
Sbjct: 209 RAEELSDARRRLAFEELYLIQCGLLALKKRSVESQ---RGIAHGENGVRVAA-------- 257
Query: 500 LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
+L ALP++LT Q + +E+ D++ P+PM RL+QGDVG GKT +A LA ++ + S
Sbjct: 258 ----VLEALPFTLTEDQQTVWTEVARDMESPLPMRRLVQGDVGSGKTAIALLALVKTVES 313
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
G Q AFM PTE+LA QHY++L +LL + ++A L+G K L +
Sbjct: 314 GRQGAFMAPTEILARQHYDYLQELLTPL-----GIRVAFLSGRLAKKARTETDAALAAHE 368
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
+ +V+GTH+LI + V F+AL L + DEQ RFGV QR K
Sbjct: 369 VDIVVGTHALIEDHVAFAALGLVVTDEQHRFGVAQRSALEKK------------------ 410
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYI 729
+ P VL M+ATPIPRT+ L +YGD+ +++I LPPGR I+T++
Sbjct: 411 ----SEVTPDVLVMTATPIPRTMTLTVYGDLDVSRIEHLPPGRRAIRTFL 456
>gi|218296433|ref|ZP_03497176.1| ATP-dependent DNA helicase RecG [Thermus aquaticus Y51MC23]
gi|218243227|gb|EED09758.1| ATP-dependent DNA helicase RecG [Thermus aquaticus Y51MC23]
Length = 767
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 177/514 (34%), Positives = 251/514 (48%), Gaps = 94/514 (18%)
Query: 224 QLENCGFYTLRKLLHHFPRTYADLQN--AQIDLDDGQYFIFIGEIISSRGMKAGCSFSFL 281
+L G +T+R +LHH+PR Y D + L+DGQ KA S
Sbjct: 107 KLSELGLHTVRDVLHHYPRRYEDRRALPGVRYLEDGQ--------------KATLSVK-- 150
Query: 282 EVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGE 341
++ E+ T G ++V + + L L F + + I + G
Sbjct: 151 --VLAKELVRT-PKKGMQLVQVKAMDAWGWRLALVWFNQPWVLSQI----------EEGA 197
Query: 342 FVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTI 401
+ V+G+V+ R N + E+ +DE SL + GR PIYP+K G+ + LR T+
Sbjct: 198 TLIVTGRVQ--RRNGVQLLVEH----FEDEGTESL-STGRIVPIYPAKEGVGQAFLRRTV 250
Query: 402 ARALQ-ALPANFDPVPKEITQE-FGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYL 459
RAL+ ALP P P E +E L+ A IH P+ + A RL FDE YL
Sbjct: 251 HRALEMALPL---PDPVEPYREGLALMPYSQALRAIHFPEDEEALKKALLRLKFDE--YL 305
Query: 460 QLGRLYQMLEG---LGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQ 516
L + G LG F E E W KK ALP+ LT +Q
Sbjct: 306 LLELKALLDAGGVVLGRAFRVE----------------EAWVEAFKK---ALPFPLTRAQ 346
Query: 517 LSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQH 576
++EI D++ P M RLLQGDVG GKTVVA A +G Q A M PTE+LA QH
Sbjct: 347 ERVMAEIAQDMQSPRQMARLLQGDVGSGKTVVAAFALYLAAMNGAQGALMAPTEILARQH 406
Query: 577 YEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEF 636
+++L + L + ++ LL GSTP ++ I L++G+ + +GTH+LI E VEF
Sbjct: 407 FQNLTRYLFPL-----GVRVELLLGSTPAREREAILARLRSGEAQVAVGTHALIQEGVEF 461
Query: 637 SALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSAT 696
L LA+VDE+ RFGV+QR A++ +P P VL MSAT
Sbjct: 462 QDLGLAVVDEEHRFGVLQR---------------RALLKMAKTP-------PDVLVMSAT 499
Query: 697 PIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
PIPR+LAL LYGD+ ++ + ++PPGR P+KT ++
Sbjct: 500 PIPRSLALTLYGDLEVSVLDEMPPGRTPVKTKVL 533
>gi|116629428|ref|YP_814600.1| ATP-dependent DNA helicase RecG [Lactobacillus gasseri ATCC 33323]
gi|116095010|gb|ABJ60162.1| ATP-dependent DNA helicase RecG [Lactobacillus gasseri ATCC 33323]
Length = 679
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 168/523 (32%), Positives = 256/523 (48%), Gaps = 99/523 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGEIIS- 268
++ + G+ + L G T+ LL +FP Y DL+ +D ++DGQ + G +++
Sbjct: 12 VTELKGVGAKTATALAGLGINTIYDLLFYFPFRYDDLETIPLDQIEDGQKVLLKGIVVTD 71
Query: 269 ---SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFT 325
SR SF + +++ ++ F
Sbjct: 72 PFVSRFGYRKTRLSF------------KMKIDHDIIMVN-------------------FF 100
Query: 326 SIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPI 385
+ P+LK K + G+ V V GK + R + + + + K E + PI
Sbjct: 101 NQPWLKD---KVESGKEVAVYGKYQVARQS----LSGFKLVAEKKESGFA--------PI 145
Query: 386 YPSKGGLNASLLRDTIARALQ-ALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
Y L + L+ I AL+ LP + +P + +++ LL +H PK+ +EA
Sbjct: 146 YSVNRHLKQNKLQKLIDLALEEVLPEVGETIPAALREKYRLLSDQILVEKMHHPKNGNEA 205
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKE--GLLDKYRKPRLNAAYMEGWSSLTK 502
LAR+ IF EFF Q+ +L Q+L +Q +++ G+ +Y + K
Sbjct: 206 KLARRSAIFREFFLFQV-QLAQLL----SQRDEDVPGVEKRYD------------LAAVK 248
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
+L++A+P+ L+ Q ++EI DL P M RLLQGDVG GKTVVA A I +G+Q
Sbjct: 249 ELIQAIPFELSDDQKKVVNEIFADLHSPRQMKRLLQGDVGSGKTVVAVFAIYATITAGFQ 308
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
AA MVPTE+LA QH+ + +LL + ++ALLTG T + + I ++L G I +
Sbjct: 309 AALMVPTEILAQQHFAKVDELLRPL-----GVRVALLTGDTKELEKKEIYRELADGTINV 363
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
VIGTH+LI + V F L L I+DEQ RFGV QR T + G
Sbjct: 364 VIGTHALIQKDVHFKNLGLVIIDEQHRFGVNQRN--------TLIKKG------------ 403
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
+AP VLAM+ATPIPRTLAL +YGDM++++I LP GR P+
Sbjct: 404 ---VAPDVLAMTATPIPRTLALTVYGDMAVSEIRHLPKGRKPV 443
>gi|375099372|ref|ZP_09745635.1| ATP-dependent DNA helicase RecG [Saccharomonospora cyanea NA-134]
gi|374660104|gb|EHR59982.1| ATP-dependent DNA helicase RecG [Saccharomonospora cyanea NA-134]
Length = 719
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 163/524 (31%), Positives = 238/524 (45%), Gaps = 90/524 (17%)
Query: 230 FYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEI 289
+T+ LL H+PR YA GE+ G++ G + L +
Sbjct: 26 LHTVGDLLRHYPRRYAQR----------------GELTDIAGLEIGEHVTVLARVESTTK 69
Query: 290 ADTETTSGD--EVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSG 347
T G EV D ++ + +R E + + G +G
Sbjct: 70 KPMRTRKGSILEVTITDGLRRLSCAFFGNQTWR-------------ERELRPGRTGLFAG 116
Query: 348 KVRAMR-----SNNHYEMREYNID-VLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTI 401
KV A R +N YE+ E + D L DD R P+YP+ GL + + +
Sbjct: 117 KVTAFRRSLQLANPEYELIESDSDDGLSTVDDF----LSRIIPVYPAAQGLPSWRISKAV 172
Query: 402 ARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL--ARKRLIFDEFFYL 459
+ L+ L DP+P+ + +E GL+ LF+A IH+P H D ADL AR RL +DE +
Sbjct: 173 HQTLEMLDREPDPLPEWLRREHGLVTLFEALHAIHRP-HSD-ADLHGARTRLKWDEALAV 230
Query: 460 QL--GRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQL 517
QL R Q G R A + + LP+ LT Q
Sbjct: 231 QLVLARRRQSTGG-----------------RAAPACPPKPGGIAEAFDERLPFRLTEGQR 273
Query: 518 SAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHY 577
+ DL PMNRLLQG+VG GKT+VA A ++V+ +G QAA + PTE+LA QH
Sbjct: 274 EVGEAVSADLAGEHPMNRLLQGEVGSGKTIVALRAMLQVVDAGRQAALLAPTEVLAAQHA 333
Query: 578 EHLLKLLDNMEEDKH------KPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIA 631
L +LL ++ + ++ LLTGS P +Q + D +G +V+GTH+L+
Sbjct: 334 RSLRELLGDLAQAGELGGSECATRVTLLTGSLPARQRKQALLDAASGAAGIVVGTHALLG 393
Query: 632 EKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVL 691
E V F+ L ++DEQ RFGV QR S+ + ++PHVL
Sbjct: 394 EHVSFADLAFVVIDEQHRFGVEQRDALRSRA--------------------GEDISPHVL 433
Query: 692 AMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
M+ATPIPRT+A+ +YGD+ + + LP GR PI T ++ EK
Sbjct: 434 VMTATPIPRTVAMTVYGDLETSSLRQLPSGRSPISTTVVPAAEK 477
>gi|227893319|ref|ZP_04011124.1| DNA helicase RecG [Lactobacillus ultunensis DSM 16047]
gi|227864899|gb|EEJ72320.1| DNA helicase RecG [Lactobacillus ultunensis DSM 16047]
Length = 681
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 171/521 (32%), Positives = 262/521 (50%), Gaps = 95/521 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGEIISS 269
++ + G+ + L + G Y++ LL +FP Y +LQ +D + DGQ + G I+++
Sbjct: 13 VTDLKGVGTKTAADLGSLGIYSIYDLLFYFPFRYDELQTLPLDQIMDGQKVMLKG-IVAT 71
Query: 270 RGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPF 329
+ + + I +V+ ++ F + P+
Sbjct: 72 EPFVSRFGYKKTRLSFKMRI-------DHDVIMVN-------------------FFNQPW 105
Query: 330 LKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSK 389
LK+ K ++G+ V + GK R + + + V E+D + PIYP
Sbjct: 106 LKN---KIEIGQEVAIYGKYNVARES----LSAFKF-VAAKENDSGMA------PIYPVN 151
Query: 390 GGLNASLLRDTIARALQALPANF-----DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
+ L + I A+ NF D VP +I +++ LL + +H+PK+ EA
Sbjct: 152 RHVKQKKLVNLINLAID----NFLDQVQDIVPLQIREKYRLLKDQEIIQKMHRPKNGQEA 207
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
++A++ IF EFF +L +L + G Q EG KY ++ ++LT
Sbjct: 208 EIAKRSAIFREFFIFEL-QLTLLASHDGKQ---EGYPKKYD--------LKEIANLTN-- 253
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
+LP+ L++ Q ++EI D+ P M RLLQGDVG GKTVVA A I +GYQAA
Sbjct: 254 --SLPFELSNDQKRVVNEIFADMHSPGQMRRLLQGDVGSGKTVVAVYAIFAAITAGYQAA 311
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
MVPTE+LATQH++ + +LL + ++ALLTG+T + R I ++L G I +VI
Sbjct: 312 LMVPTEILATQHFKKIDELLRPL-----GVRVALLTGNTKTLERREIYRELTDGTINVVI 366
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+LI + V F L L I+DEQ RFGV QR A++N K D+
Sbjct: 367 GTHALIQKNVIFKKLGLVIIDEQHRFGVGQR---------------QALIN-----KGDR 406
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
P +LAM+ATPIPRTLAL +YGDM++++I LP GR PI
Sbjct: 407 ---PDILAMTATPIPRTLALTVYGDMTVSEIHHLPAGRKPI 444
>gi|212639602|ref|YP_002316122.1| ATP-dependent DNA helicase RecG [Anoxybacillus flavithermus WK1]
gi|212561082|gb|ACJ34137.1| RecG-like helicase [Anoxybacillus flavithermus WK1]
Length = 682
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 168/539 (31%), Positives = 258/539 (47%), Gaps = 103/539 (19%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYAD-----LQNAQIDLDDGQYF 260
+L + ++ + G+ + L G T+ +LL+HFP Y D L+ A+ D +
Sbjct: 4 VLHQSVTAIKGIGEETAAALHEMGIDTIEQLLYHFPFRYEDYRICALEEAKHD----EKI 59
Query: 261 IFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHL--KKF 318
IG++ S + V+ S +K ++ + +F
Sbjct: 60 TIIGKVYS-----------------------------EPVLTYYSRKKSRLTFRVLVDRF 90
Query: 319 FRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRA 378
+ P+LK K + E V ++GK R +++ +I +K + ++
Sbjct: 91 LVTAVCFNQPYLKK---KLILHETVTITGKWDKHRQT--ITVQQLHIGEMKRQKEIE--- 142
Query: 379 KGRPYPIYPSKGGLNASLLRDTIARALQAL-PANFDPVPKEITQEFGLLCLFDAYMGIHQ 437
P+Y ++G L +R IA ALQ A DP+P E+ Q + L+ DA IH
Sbjct: 143 -----PVYSTRGDLTVKGMRRFIALALQQYGDAIVDPLPSELLQTYRLISKRDAIRAIHM 197
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRK---PRLNAAYM 494
P ++ AR+RL+++EF QL K L KYR+ P + +
Sbjct: 198 PLSHEQLKQARRRLVYEEFLLFQL---------------KMQALKKYRREQSPGIAHRFS 242
Query: 495 EGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACM 554
+G + +++LP+ LT++Q + EI+ DLK P MNRLLQGDVG GKTVVA +A
Sbjct: 243 DGQ---LQSFIQSLPFPLTNAQQRVVREIVQDLKSPYRMNRLLQGDVGSGKTVVAAVALY 299
Query: 555 EVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKD 614
V SGYQ A MVPTE+LA QH E L LL M ++ LLT S K+ + + +
Sbjct: 300 AVYLSGYQGALMVPTEILAEQHAESLCTLLAPM-----GIRVELLTSSVKGKRRKQLLEQ 354
Query: 615 LQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMV 674
L GD+ +V+GTH+LI + V F+ L + I DEQ RFGV QR K
Sbjct: 355 LALGDVHVVVGTHALIQDDVNFAKLGVVITDEQHRFGVEQRRILREK------------- 401
Query: 675 NSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN 733
+P VL M+ATPIPRTLA+ +G+M ++ I ++P GR I+TY ++ +
Sbjct: 402 ----------GQSPDVLFMTATPIPRTLAITAFGEMDVSIIDEMPKGRKKIETYWVKHD 450
>gi|365840666|ref|ZP_09381848.1| ATP-dependent DNA helicase RecG [Anaeroglobus geminatus F0357]
gi|364560745|gb|EHM38666.1| ATP-dependent DNA helicase RecG [Anaeroglobus geminatus F0357]
Length = 677
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 164/533 (30%), Positives = 240/533 (45%), Gaps = 103/533 (19%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISS 269
I+ + G+ + G T+ LL +FPR Y +D + + IGE ++
Sbjct: 4 AITEIKGIGAQKGKLFAKVGIRTVTDLLQYFPRAY----------EDRSHIVPIGEAAAA 53
Query: 270 RGMKA---GCSFSFLEV-----IVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRG 321
G+ G S EV + ++ +++T E++ + KK++
Sbjct: 54 EGLSVLINGTVSSVTEVRPRRGMTILKVFISDSTGAVELIWFNRPFKKRM---------- 103
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
F K +E V GK+ E R + + E + + A G
Sbjct: 104 -------FRKGME--------VHAFGKI---------EHRYGRLQMNSPEAEPGVAAPGG 139
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEF-GLLCLFDAYMGIHQPKH 440
P+Y GL + R + A D +P ++ E G + Y IH P
Sbjct: 140 LVPVYALTDGLYQNDFRKAVTAAFAYAKEYGDVLPACLSAEVTGRAVTAEMYKAIHFPPD 199
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLE---GLGTQFEKEGLLDKYRKPRLNAAYMEGW 497
+ ARK L F+E F LQ G L + E G +F G
Sbjct: 200 FEVLKKARKILAFEELFSLQAGLLLKRQENKAGRAVKFGPNG------------------ 241
Query: 498 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
L K LL LP++LT Q+ A S+I D++ PM RL+QGDVG GKTVVA LA + +
Sbjct: 242 -KLVKGLLNNLPFTLTQGQIDAFSDIQNDVETESPMQRLIQGDVGSGKTVVAALALAKTV 300
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
+GYQ A M PT +LA QHYE +L + +ALLTG + K+ + + L
Sbjct: 301 ENGYQGALMAPTGILAVQHYEEFTRLFTGL-----PVTVALLTGRSTAKERAELLRGLAN 355
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
DI +++GTH+LI E V F+ L LA+ DEQ RFGV QR +
Sbjct: 356 RDIDILVGTHALIQEDVVFADLALAVTDEQHRFGVKQRVKLR------------------ 397
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
D+ APH L M+ATPIPRTLAL++YGD+ ++ I ++PPGR P+KTY +
Sbjct: 398 -----DKGKAPHSLYMTATPIPRTLALSVYGDLDVSTIREVPPGRKPVKTYAV 445
>gi|292669654|ref|ZP_06603080.1| DNA helicase RecG [Selenomonas noxia ATCC 43541]
gi|292648451|gb|EFF66423.1| DNA helicase RecG [Selenomonas noxia ATCC 43541]
Length = 688
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 169/537 (31%), Positives = 251/537 (46%), Gaps = 83/537 (15%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L IS V G+ + G T+ LL ++PR Y D Q++ + D
Sbjct: 3 LTDSISKVRGVGVKKSAAFARLGIRTVYDLLTYYPRAYED-QSSITRIAD---------- 51
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTET-----TSGDEVVNIDSGQKKKIYLHLKKFFRG 321
++AG + L VI ++ D +T T ++ +G + ++ + +
Sbjct: 52 -----LRAGMRATVLGVI--HQVTDRQTRRRGFTVLTALIGDGTGYMQAVWFNQR----- 99
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVR-AMRSNNHYEMREYNIDVLKDEDDLSLRAKG 380
FLKS K + G + ++GK A + + L D + G
Sbjct: 100 -------FLKS---KLREGRRILLTGKTDYAYNGGGQLALSQITSFELLGARDHAESLLG 149
Query: 381 RPYPIYPSKGGLNASLLRDTIARAL-QALPANFDPVPKEITQEFGLLCLFDAYMGIHQPK 439
PIY + GL LR + AL Q+ + +P I QE+ L+ DA+ IH PK
Sbjct: 150 -ILPIYAATEGLPQKQLRQMMEYALAQSADKLTETLPPRIRQEYDLIGRADAFRRIHFPK 208
Query: 440 HIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSS 499
+E AR+RL F+E + +Q G L T E+EG+ R N
Sbjct: 209 REEELRAARRRLAFEELYLIQCGLLALKKR---TAEEQEGIAH-----RPNGV------- 253
Query: 500 LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
L ++L ALP+ LT Q EI D++ P+PM RL+QGDVG GKT VA LA ++ +
Sbjct: 254 LAARVLEALPFELTEDQAKVWGEIARDMESPLPMRRLVQGDVGSGKTAVALLALVKTTEN 313
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
GYQ A M PTE+LA QHY++L LL + ++ L+G K+ I L
Sbjct: 314 GYQGALMAPTEILARQHYDYLQTLLTPL-----GIRVGFLSGRLTKKERAEIDAALAAHT 368
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
+ +++GTH+LI + V F AL L + DEQ RFGV QR K S G+
Sbjct: 369 VDIIVGTHALIQDHVAFDALGLVVTDEQHRFGVAQRTALEKK--------------SGGT 414
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKG 736
P VL M+ATPIPRT+ L +YGD+ +++I LPPGR PI+T++ + +G
Sbjct: 415 PD--------VLVMTATPIPRTMTLTVYGDLDVSRIEHLPPGRRPIRTFLRDETARG 463
>gi|417986993|ref|ZP_12627555.1| ATP-dependent DNA helicase [Lactobacillus casei 32G]
gi|418005324|ref|ZP_12645319.1| ATP-dependent DNA helicase [Lactobacillus casei UW1]
gi|410524057|gb|EKP98974.1| ATP-dependent DNA helicase [Lactobacillus casei 32G]
gi|410547253|gb|EKQ21490.1| ATP-dependent DNA helicase [Lactobacillus casei UW1]
Length = 679
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 167/541 (30%), Positives = 247/541 (45%), Gaps = 101/541 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
++ +PG+ + L + G +T+R LL +FP Y DL+ +
Sbjct: 7 VTVLPGVGPKREAGLASLGIHTIRDLLFYFPYRYDDLKVKDL------------------ 48
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNID--------SGQKKKIYLHLKKFFRGT 322
E AD E + +V D + + L +++
Sbjct: 49 ----------------AEAADQEKLTVKGIVVTDPVISRFGPHRSRVNVKLQIERSVILV 92
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+LK + ++G+ + GK A R + + I + +D S+ A
Sbjct: 93 TFFNQPWLKD---RFQMGDEAAIFGKWDAKRRS----LTGMKILATQSQDQPSMAA---- 141
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
IY + L D I A + N D VP I + + L+ G+H P
Sbjct: 142 --IYTVNKNVRMGTLLDLIKAAWERDQQNINDLVPASIREHYRLMSDAQLVHGMHFPDTP 199
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
EA AR+ +F EFF QL Q L+ L GL Y L A
Sbjct: 200 AEAKAARRTGVFREFFLFQLQ--IQALKQLNAN-SSNGLAIPYDNQALRA---------- 246
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
L+ LP++LT++Q ++EI D+++P MNRLLQGDVG GKTVVA + + +G+
Sbjct: 247 --LIATLPFALTNAQKRVVNEICADMRRPNHMNRLLQGDVGSGKTVVAAIVLYAAVTAGF 304
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
QAA MVPTE+LA QH+ L KL + K+ LLTGST K+ R + +L+ G +
Sbjct: 305 QAALMVPTEVLAEQHFAKLTKLFKDF-----PVKLGLLTGSTSTKKRRELLSELRDGRLN 359
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
L+IGTH+LI + V+F AL L ++DEQ RFGV QR K
Sbjct: 360 LIIGTHALIQKGVDFHALGLVVIDEQHRFGVNQRKILQEK-------------------- 399
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVY 741
P +L+M+ATPIPRTLA+ YG+M ++ I +LP GR PI T + N+ + VY
Sbjct: 400 ---GQKPDLLSMTATPIPRTLAITAYGEMDVSTIDELPAGRKPIATTWLRKNQ--IDQVY 454
Query: 742 K 742
+
Sbjct: 455 R 455
>gi|420147420|ref|ZP_14654696.1| DNA helicase RecG [Lactobacillus gasseri CECT 5714]
gi|398401421|gb|EJN54923.1| DNA helicase RecG [Lactobacillus gasseri CECT 5714]
Length = 679
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 171/523 (32%), Positives = 258/523 (49%), Gaps = 99/523 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGEIIS- 268
++ + G+ + L G T+ LL +FP Y DL+ +D ++DGQ + G +++
Sbjct: 12 VTELKGVGAKTATALAGLGINTIYDLLFYFPFRYDDLETIPLDQIEDGQKVLLKGIVVTD 71
Query: 269 ---SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFT 325
SR SF ++ + +I +VN F
Sbjct: 72 PFVSRFGYRKTRLSF-KMKIDHDII---------MVN---------------------FF 100
Query: 326 SIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPI 385
+ P+LK K + G+ V V GK + R + + + + K E + PI
Sbjct: 101 NQPWLKD---KVESGKEVAVYGKYQVARQS----LSGFKLVAEKKESGFA--------PI 145
Query: 386 YPSKGGLNASLLRDTIARALQ-ALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
Y L + L+ I AL+ LP + +P + +++ LL +H PK+ +EA
Sbjct: 146 YSVNRHLKQNKLQKLIDLALEEVLPEVGETIPAALREKYRLLSDQILVEKMHHPKNGNEA 205
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKE--GLLDKYRKPRLNAAYMEGWSSLTK 502
LAR+ IF EFF Q+ +L Q+L +Q +++ G+ +Y + K
Sbjct: 206 KLARRSAIFREFFLFQV-QLAQLL----SQRDEDVPGVEKRYD------------LAAVK 248
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
+L++A+P+ L+ Q ++EI DL P M RLLQGDVG GKTVVA A I +G+Q
Sbjct: 249 ELIQAIPFELSDDQKKVVNEIFADLHSPRQMKRLLQGDVGSGKTVVAVFAIYATITAGFQ 308
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
AA MVPTE+LA QH+ + +LL + ++ALLTG T + + I ++L G I +
Sbjct: 309 AALMVPTEILAQQHFAKVDELLRPL-----GVRVALLTGDTKELEKKEIYRELADGTINV 363
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
VIGTH+LI + V F L L I+DEQ RFGV QR T + G
Sbjct: 364 VIGTHALIQKDVHFKNLGLVIIDEQHRFGVNQRN--------TLIKKG------------ 403
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
+AP VLAM+ATPIPRTLAL +YGDM++++I LP GR P+
Sbjct: 404 ---VAPDVLAMTATPIPRTLALTVYGDMAVSEIRHLPKGRKPV 443
>gi|429740564|ref|ZP_19274248.1| ATP-dependent DNA helicase RecG [Porphyromonas catoniae F0037]
gi|429160772|gb|EKY03222.1| ATP-dependent DNA helicase RecG [Porphyromonas catoniae F0037]
Length = 697
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 156/439 (35%), Positives = 228/439 (51%), Gaps = 65/439 (14%)
Query: 302 NIDSGQKKKIYLHLKKFFRGTRFTSIPFLKS---IEGKHKVGEFVCVSGK---VRAMRSN 355
I G+KK++ + F GT + + +S I+ + VG+ + GK S
Sbjct: 72 EIGEGRKKRLVAY---FSDGTGTIELVWFRSLSTIQRLYPVGQTYLIFGKPVLFNGSYSI 128
Query: 356 NHYEMREYNIDVLKDEDDLSLRAKGRPYPIYP-----SKGGLNASLLRDTIARALQALPA 410
NH E+ DE+ G PIYP + G+ +R + L+A +
Sbjct: 129 NHPEV---------DEESRQQAVSGGLMPIYPLTEKVKRIGIANRQMRQLLYILLEACRS 179
Query: 411 NF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLE 469
+ +P+ I Q L+ A IH P+ E + AR+RL FDE F++QL RL
Sbjct: 180 QIRETLPEHIIQRAQLIPYGTAIQQIHFPEGNTELEAARRRLKFDELFFIQL-RL----- 233
Query: 470 GLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQ 529
LG + E++ + PR+ A+ +SSL P+ LTS+Q I EI D+
Sbjct: 234 -LGMKNERKATSPGFPLPRVGEAFRGLYSSL--------PFDLTSAQKRVIREIQTDVVS 284
Query: 530 PVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEE 589
MNRL+QGDVG GKT+VA A + + +GYQA M PTE+LA QH+ L +LL +
Sbjct: 285 GKQMNRLVQGDVGSGKTLVALFAMLLALDNGYQACMMAPTEILARQHFLSLTELLAPL-- 342
Query: 590 DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQR 649
++ LL GST ++ + + L+ G + +++GTH+L+ V+F L LA++DEQ R
Sbjct: 343 ---GIEVGLLLGSTKKRERTKLHEGLRDGSLRIIVGTHALLEPVVQFHRLGLAVIDEQHR 399
Query: 650 FGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGD 709
FGVVQR SG+ N + QH PH+L MSATPIPRTLA+ LYGD
Sbjct: 400 FGVVQR-------------SGLWTKN------ESQH--PHILIMSATPIPRTLAMTLYGD 438
Query: 710 MSLTQITDLPPGRIPIKTY 728
+ ++ I +LPPGR PI+TY
Sbjct: 439 LDISVIDELPPGRKPIQTY 457
>gi|295693180|ref|YP_003601790.1| ATP-dependent DNA helicase recg [Lactobacillus crispatus ST1]
gi|295031286|emb|CBL50765.1| ATP-dependent DNA helicase RecG [Lactobacillus crispatus ST1]
Length = 678
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 170/517 (32%), Positives = 253/517 (48%), Gaps = 87/517 (16%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGEIISS 269
++ + G+ + L + G Y++ LL +FP Y +LQ +D + DGQ + G I+++
Sbjct: 10 VTDLKGVGTKTTAALGSLGIYSIYDLLFYFPFRYDELQTLPLDQIMDGQKVMLKG-IVAT 68
Query: 270 RGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPF 329
+ + + I +V+ ++ F + P+
Sbjct: 69 EAFVSRFGYKKTRLSFKMRI-------DHDVIMVN-------------------FFNQPW 102
Query: 330 LKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSK 389
LK+ K ++G+ V + GK R + + + V E+D + PIYP
Sbjct: 103 LKN---KIEIGQEVAIYGKYNVARQS----LTAFKF-VAAKENDSGMA------PIYPVN 148
Query: 390 GGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLAR 448
+ L D I A+ D VP+++ QE+ LL +H PK+ EA+LA+
Sbjct: 149 RHVKQKKLVDLINVAIDDFIDQVQDIVPEKLRQEYRLLKDQVIIEKMHHPKNSHEAELAK 208
Query: 449 KRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRAL 508
+ IF EFF +L +L + G Q G KY + +L ++L
Sbjct: 209 RSAIFREFFIFEL-QLALLTRNDGKQM---GYAKKYDLTEI------------AQLTKSL 252
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
P+ L+ Q ++EI D+ M RLLQGDVG GKTVVA A I +GYQAA MVP
Sbjct: 253 PFELSDDQKHVVNEIFADMHSDGQMRRLLQGDVGSGKTVVAVYAIFAAITAGYQAALMVP 312
Query: 569 TELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHS 628
TE+LATQH++ + +LL + ++ALLTG+T + R I +L G I +VIGTH+
Sbjct: 313 TEILATQHFKKIDELLRPL-----GVRVALLTGNTKTLERREIYCELTDGTINVVIGTHA 367
Query: 629 LIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAP 688
LI + V F L L I+DEQ RFGV QR A++N K DQ P
Sbjct: 368 LIQDSVIFKKLGLVIIDEQHRFGVGQR---------------QALIN-----KGDQ---P 404
Query: 689 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
+LAM+ATPIPRTLAL +YGDM++++I LP GR PI
Sbjct: 405 DILAMTATPIPRTLALTVYGDMTVSEIHHLPAGRKPI 441
>gi|419714471|ref|ZP_14241887.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus M94]
gi|382945590|gb|EIC69884.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus M94]
Length = 746
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 184/588 (31%), Positives = 252/588 (42%), Gaps = 142/588 (24%)
Query: 217 LSKRLYHQLEN---------CGFYTLRKLLHHFPRTYA---DLQNAQIDLDDGQY----- 259
LS RL H L N G T+ LLHH+PR Y+ L++ Q DG+
Sbjct: 4 LSDRLDHVLGNKASDVLDAEFGLITVEDLLHHYPRRYSTDFSLRDEQ----DGERAKPGE 59
Query: 260 ------FIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYL 313
FI E+ S R K FL V +G + T +
Sbjct: 60 HTTLVGFITSAELKSMRNRKG----QFLSVTLGSAPHAVQAT----------------FF 99
Query: 314 HLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDD 373
H K R +VG V +SG V R +Y VL++
Sbjct: 100 HPHKVKRDL---------------QVGNRVMLSGAVGEFRGKPQLTHPDYL--VLENALG 142
Query: 374 LSLRAKGRP-----------------------YPIYPSKGGLNASLLRDTIARALQALPA 410
S +G +PIYP+ L + I R + +
Sbjct: 143 ESTETRGSTALRGIAGAARDASTAISAFQRNVFPIYPATKNLESW----DIYRCIDQVLT 198
Query: 411 NFDPVPKE----ITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQ 466
DPVP+ + E+GL+ L +A IH + E AR+RL FDE LQL +
Sbjct: 199 QLDPVPEALPDAVLAEYGLMSLDEALRKIHMSEDASEQKQARRRLAFDEALGLQLALAMR 258
Query: 467 MLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWD 526
G++ G P + A + L LL LP+ LT Q ++EI D
Sbjct: 259 R----GSEIGSAG-------PPMPLAQ----AGLRADLLGQLPFDLTEGQRHVVAEIGED 303
Query: 527 LKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDN 586
L PMNRLLQG+VG GKTVVA LA M+ I +GYQ A + PTE+LA QH L +L +
Sbjct: 304 LAGVKPMNRLLQGEVGSGKTVVALLAMMQAIDAGYQCALLAPTEVLAVQHARSLRAMLGS 363
Query: 587 MEEDKH------KPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALR 640
+ IALLTGS + I+ D+ TG +VIGTH+L+ + V+F L
Sbjct: 364 LATAGELGAPDDATSIALLTGSMSPAVKKQIKADVATGLAGIVIGTHALLQDSVDFHNLG 423
Query: 641 LAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPR 700
L +VDEQ RFGV QR R +K Q + PH+L M+ATPIPR
Sbjct: 424 LVVVDEQHRFGVEQRDRLRAKA--------------------SQGIVPHLLVMTATPIPR 463
Query: 701 TLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK------GYENVYK 742
T+AL ++GD+ + + +LP GR PI T + EK G+E + +
Sbjct: 464 TVALTVFGDLETSTLRELPRGRQPITTTAVFTREKPGWLARGWERIAE 511
>gi|256851309|ref|ZP_05556698.1| ATP-dependent DNA helicase RecG [Lactobacillus jensenii 27-2-CHN]
gi|260660733|ref|ZP_05861648.1| ATP-dependent DNA helicase RecG [Lactobacillus jensenii 115-3-CHN]
gi|297206179|ref|ZP_06923574.1| DNA helicase RecG [Lactobacillus jensenii JV-V16]
gi|256616371|gb|EEU21559.1| ATP-dependent DNA helicase RecG [Lactobacillus jensenii 27-2-CHN]
gi|260548455|gb|EEX24430.1| ATP-dependent DNA helicase RecG [Lactobacillus jensenii 115-3-CHN]
gi|297149305|gb|EFH29603.1| DNA helicase RecG [Lactobacillus jensenii JV-V16]
Length = 674
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 169/519 (32%), Positives = 249/519 (47%), Gaps = 92/519 (17%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGEIISS 269
++ + G+ + LE+ Y++ LL +FP Y DL+ +D L+DGQ + G II++
Sbjct: 9 VTRLKGVGPKTAAALESLSIYSIYDLLFYFPYRYDDLEMIPLDQLNDGQKVLLKG-IIAT 67
Query: 270 RGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPF 329
+ + + I +++ ++ F + P+
Sbjct: 68 EPFVSRFGYKKSRLSFKLRI-------DHDIIMVN-------------------FFNQPW 101
Query: 330 LKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSK 389
LKS + +VG+ V V GK + + + + K E K P+YP
Sbjct: 102 LKS---QLEVGKEVAVYGKYNLAKQS----LSGFKFVAAKSE-------KSSLSPVYPVN 147
Query: 390 GGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARK 449
+ L + I AL D VP+EI Q++ L+ + +H+PK +EA LA++
Sbjct: 148 RHIKQKKLIELIKLALAQKQELMDIVPEEIRQKYRLMNDQELVEKMHEPKSPNEAKLAKR 207
Query: 450 RLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALP 509
IF EFF ++Q+ L T +G L +K LN KKL LP
Sbjct: 208 SAIFREFF------IFQVQLALLT-MRPQGRLGTAKKYDLNE---------IKKLTNTLP 251
Query: 510 YSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPT 569
+ L++ Q I+E+ DL Q M RLLQGDVG GKTVVA I +GYQAA MVPT
Sbjct: 252 FELSADQKKVINELFADLHQKRQMRRLLQGDVGSGKTVVAVFGIYAAITAGYQAALMVPT 311
Query: 570 ELLATQHYEHLLKLLDNMEEDKHKP---KIALLTGSTPVKQSRMIRKDLQTGDITLVIGT 626
E+LA QH+ + +LL +P +IALLT ST + R I ++L G + +VIGT
Sbjct: 312 EILANQHFGKIDELL--------RPFGVRIALLTSSTKTMEKREIYRELADGTLNVVIGT 363
Query: 627 HSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHM 686
H+LI ++F L L I+DEQ RFGV QR + M+ +
Sbjct: 364 HALIQPGLKFKKLGLVIIDEQHRFGVNQRQKL--------------MIKGEN-------- 401
Query: 687 APHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
P +LAM+ATPIPRTLAL YG+M +++I LP GR PI
Sbjct: 402 -PDLLAMTATPIPRTLALTAYGEMDVSEIRHLPAGRKPI 439
>gi|334340281|ref|YP_004545261.1| ATP-dependent DNA helicase RecG [Desulfotomaculum ruminis DSM 2154]
gi|334091635|gb|AEG59975.1| ATP-dependent DNA helicase RecG [Desulfotomaculum ruminis DSM 2154]
Length = 684
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 168/532 (31%), Positives = 256/532 (48%), Gaps = 80/532 (15%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGE 265
LL K + + G+ + QLE G ++ LL+HFPR Y D + + F G+
Sbjct: 2 LLQKPVQFLKGVGPQRARQLERIGILSVGDLLYHFPREYQDRSS----IRPAHSFAH-GD 56
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFT 325
+ + RG VI G E T+ G + + ++ I+ + +
Sbjct: 57 LATVRGT----------VITGQE---TKPRRGLTLTKLALEEEAGIFYAV--------WF 95
Query: 326 SIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPI 385
+ P++K ++ G+ + ++GK+ RS +++ + +VL+ ++ L GR PI
Sbjct: 96 NQPYIKK---QYPPGKRLLLTGKMD--RSFGVPQIQVADHEVLEGDESLH---SGRIVPI 147
Query: 386 YPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
YP+ ++ R I L + AN + +P EI + L C+ +A IH P ++
Sbjct: 148 YPATENISQRFFRSMIKGFLDGVGANLPEFLPDEILDRYHLPCVAEALAEIHFPTSMEAC 207
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
ARKR + +E F QLG Q K R R ++ + K
Sbjct: 208 QRARKRFVLEELFLFQLGLCLQ----------------KDRTNRQEKSHRYKSRKVVKSF 251
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
LP+ LT +Q EI D++ PMNRLLQGDVG GKT VA LA + SG Q+
Sbjct: 252 ADILPFQLTEAQKRVWQEIERDMEASRPMNRLLQGDVGSGKTAVAALALYKAAASGLQSV 311
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
MVPTELLA QH + KLL+ + ++ALLTG + + + + + + G+I +V+
Sbjct: 312 LMVPTELLAEQHAASVGKLLEPL-----GIRVALLTGGSR-RGRKQVLEQIAGGEIDVVV 365
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+LI V+F L L +VDEQ RFGV QR D+
Sbjct: 366 GTHALIQGPVQFKQLALVVVDEQHRFGVRQRAALQ-----------------------DK 402
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKG 736
P +L M+ATPIPRTLAL LYG++ + I +LPPGR P+KTY + ++ G
Sbjct: 403 GHRPDILVMTATPIPRTLALTLYGELEASVIDELPPGRQPVKTYHLSLSQAG 454
>gi|169630359|ref|YP_001704008.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus ATCC
19977]
gi|420864705|ref|ZP_15328094.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 4S-0303]
gi|420869494|ref|ZP_15332876.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus
4S-0726-RA]
gi|420873939|ref|ZP_15337315.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus
4S-0726-RB]
gi|420910896|ref|ZP_15374208.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 6G-0125-R]
gi|420917350|ref|ZP_15380653.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 6G-0125-S]
gi|420922514|ref|ZP_15385810.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 6G-0728-S]
gi|420928177|ref|ZP_15391457.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 6G-1108]
gi|420967784|ref|ZP_15430988.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 3A-0810-R]
gi|420978517|ref|ZP_15441694.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 6G-0212]
gi|420983900|ref|ZP_15447067.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 6G-0728-R]
gi|420988004|ref|ZP_15451160.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 4S-0206]
gi|421008577|ref|ZP_15471687.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 3A-0119-R]
gi|421013874|ref|ZP_15476952.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 3A-0122-R]
gi|421018817|ref|ZP_15481874.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 3A-0122-S]
gi|421024875|ref|ZP_15487919.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 3A-0731]
gi|421030371|ref|ZP_15493402.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 3A-0930-R]
gi|421035842|ref|ZP_15498860.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 3A-0930-S]
gi|421040550|ref|ZP_15503558.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 4S-0116-R]
gi|421044293|ref|ZP_15507293.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 4S-0116-S]
gi|169242326|emb|CAM63354.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus]
gi|392063421|gb|EIT89270.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 4S-0303]
gi|392065414|gb|EIT91262.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus
4S-0726-RB]
gi|392068964|gb|EIT94811.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus
4S-0726-RA]
gi|392110241|gb|EIU36011.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 6G-0125-S]
gi|392112890|gb|EIU38659.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 6G-0125-R]
gi|392127167|gb|EIU52917.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 6G-0728-S]
gi|392129295|gb|EIU55042.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 6G-1108]
gi|392162795|gb|EIU88484.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 6G-0212]
gi|392168896|gb|EIU94574.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 6G-0728-R]
gi|392182283|gb|EIV07934.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 4S-0206]
gi|392196725|gb|EIV22341.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 3A-0119-R]
gi|392200729|gb|EIV26334.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 3A-0122-R]
gi|392207447|gb|EIV33024.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 3A-0122-S]
gi|392211672|gb|EIV37238.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 3A-0731]
gi|392221478|gb|EIV47001.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 4S-0116-R]
gi|392223591|gb|EIV49113.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 3A-0930-R]
gi|392224337|gb|EIV49858.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 3A-0930-S]
gi|392233746|gb|EIV59244.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 4S-0116-S]
gi|392250291|gb|EIV75765.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus 3A-0810-R]
Length = 746
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 180/583 (30%), Positives = 252/583 (43%), Gaps = 132/583 (22%)
Query: 217 LSKRLYHQLEN---------CGFYTLRKLLHHFPRTYA------DLQNAQIDLDDGQYFI 261
LS RL H L N G T+ LLHH+PR Y+ D Q+ + G++
Sbjct: 4 LSDRLDHVLGNKASDVLDAEFGLITVEDLLHHYPRRYSTDFSLRDEQDGE-SAKPGEHTT 62
Query: 262 FIGEIISS-----RGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLK 316
+G I S+ R K FL V +G + T + H
Sbjct: 63 LVGFITSAELKRMRNRKG----QFLSVTLGSAPHAVQAT----------------FFHPH 102
Query: 317 KFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNI------DVLKD 370
K R +VG V +SG V R +Y + + +
Sbjct: 103 KVKRDL---------------QVGNRVMLSGAVGEFRGKPQLTHPDYLVLETALGESTET 147
Query: 371 EDDLSLRA---------------KGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPV 415
+LR + +PIYP+ L + I R + + DPV
Sbjct: 148 RGSTALRGIAGAARDASTAISAFQRNVFPIYPATKNLESW----DIYRCIDQVLTQLDPV 203
Query: 416 PKE----ITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGL 471
P+ + E+GL+ L +A IH + E AR+RL FDE LQL +
Sbjct: 204 PEALPDAVLAEYGLMSLDEALRKIHMSEDASEQKQARRRLAFDEALGLQLALAMRR---- 259
Query: 472 GTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPV 531
G++ G P + A + L LL LP+ LT Q ++EI DL
Sbjct: 260 GSEIGSAG-------PPMPLAQ----AGLRADLLGQLPFDLTEGQRHVVAEIGEDLAGVK 308
Query: 532 PMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDK 591
PMNRLLQG+VG GKTVVA LA M+ I +GYQ A + PTE+LA QH L +L ++
Sbjct: 309 PMNRLLQGEVGSGKTVVALLAMMQAIDAGYQCALLAPTEVLAVQHARSLRAMLGSLATAG 368
Query: 592 H------KPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVD 645
IALLTGS + I+ D+ TG +VIGTH+L+ + V+F L L +VD
Sbjct: 369 ELGAPDDATSIALLTGSMSPAVKKQIKADVATGLAGIVIGTHALLQDSVDFHNLGLVVVD 428
Query: 646 EQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALA 705
EQ RFGV QR R +K Q + PH+L M+ATPIPRT+AL
Sbjct: 429 EQHRFGVEQRDRLRAKA--------------------SQGIVPHLLVMTATPIPRTVALT 468
Query: 706 LYGDMSLTQITDLPPGRIPIKTYIIEGNEK------GYENVYK 742
++GD+ + + +LP GR PI T + EK G+E + +
Sbjct: 469 VFGDLETSTLRELPRGRQPITTTAVFTREKPGWLARGWERIAE 511
>gi|419709484|ref|ZP_14236952.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus M93]
gi|382943365|gb|EIC67679.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus M93]
Length = 746
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 183/586 (31%), Positives = 254/586 (43%), Gaps = 138/586 (23%)
Query: 217 LSKRLYHQLEN---------CGFYTLRKLLHHFPRTYA---DLQNAQIDLDDGQY----- 259
LS RL H L N G T+ LLHH+PR Y+ L++ Q DG+
Sbjct: 4 LSDRLDHVLGNKASDVLDAEFGLITVEDLLHHYPRRYSTDFSLRDEQ----DGERAKPGE 59
Query: 260 ------FIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYL 313
FI E+ S R K FL V +G + T +
Sbjct: 60 HTTLVGFITSAELKSMRNRKG----QFLSVTLGSAPHAVQAT----------------FF 99
Query: 314 HLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNI------DV 367
H K R +VG V +SG V R +Y + +
Sbjct: 100 HPHKVKRDL---------------QVGNRVMLSGAVGEFRGKPQLTHPDYLVLETALGES 144
Query: 368 LKDEDDLSLRA---------------KGRPYPIYPSKGGLNASLLRDTIARALQALPANF 412
+ +LR + +PIYP+ L + I R + +
Sbjct: 145 TETRGSTALRGIAGAARDASTAISAFQRNVFPIYPATKNLESW----DIYRCIDQVLTQL 200
Query: 413 DPVPKE----ITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQML 468
DPVP+ + E+GL+ L +A IH + E AR+RL FDE LQL +
Sbjct: 201 DPVPEALPDAVLAEYGLMSLDEALRKIHMSEDASEQKQARRRLAFDEALGLQLALAMRR- 259
Query: 469 EGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLK 528
G++ G P + A + L LL LP+ LT Q ++EI DL
Sbjct: 260 ---GSEIGSAG-------PPMPLAQ----AGLRADLLGQLPFDLTEGQRHVVAEIGEDLA 305
Query: 529 QPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNME 588
PMNRLLQG+VG GKTVVA LA M+ I +GYQ A + PTE+LA QH L +L ++
Sbjct: 306 GVKPMNRLLQGEVGSGKTVVALLAMMQAIDAGYQCALLAPTEVLAVQHARSLRAMLGSLA 365
Query: 589 EDKH------KPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLA 642
IALLTGS + I+ D+ TG +VIGTH+L+ + V+F L L
Sbjct: 366 TAGELGAPDDATSIALLTGSMSPAVKKQIKADVATGLAGIVIGTHALLQDSVDFHNLGLV 425
Query: 643 IVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTL 702
+VDEQ RFGV QR R +K +P Q + PH+L M+ATPIPRT+
Sbjct: 426 VVDEQHRFGVEQRDRLRAK-----------------AP---QGIVPHLLVMTATPIPRTV 465
Query: 703 ALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK------GYENVYK 742
AL ++GD+ + + +LP GR PI T + EK G+E + +
Sbjct: 466 ALTVFGDLETSTLRELPRGRQPITTTAVFTREKPGWLARGWERIAE 511
>gi|161507718|ref|YP_001577679.1| ATP-dependent DNA helicase RecG [Lactobacillus helveticus DPC 4571]
gi|160348707|gb|ABX27381.1| ATP-dependent DNA [Lactobacillus helveticus DPC 4571]
Length = 676
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 173/530 (32%), Positives = 251/530 (47%), Gaps = 97/530 (18%)
Query: 203 IEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFI 261
IE L ++ + G+ + L + G Y++ LL +FP Y +LQ +D + DGQ +
Sbjct: 2 IENALFAPVTDLKGVGTKTAADLGSLGIYSIYDLLFYFPFRYDELQTLPLDQIMDGQKVV 61
Query: 262 FIG----EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK 317
G E SR SF + +V+ ++
Sbjct: 62 LKGFVATEPFVSRFGYKKSRLSF------------KMRIDHDVIMVN------------- 96
Query: 318 FFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLR 377
F + P+LKS K ++GE V + GK R + + + K+ D
Sbjct: 97 ------FFNQPWLKS---KIEIGEEVAIYGKYNVARQS----LSAFKFIAAKEND----- 138
Query: 378 AKGRPYPIYPSKGGLNASLLRDTIARALQA-LPANFDPVPKEITQEFGLLCLFDAYMGIH 436
PIYP + L I A+ L D VP+ I +++ LL + +H
Sbjct: 139 --SGMAPIYPVNRHVKQKKLVSLINLAIDVFLDQVRDIVPENIREKYRLLTDQEIIQKMH 196
Query: 437 QPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG 496
PK+ EA+LA++ IF EFF +L +L + G Q A Y +
Sbjct: 197 HPKNSTEANLAKRSAIFREFFIFEL-QLALLANHDGKQ----------------AGYPKN 239
Query: 497 WS-SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
+ +L +LP+ L+ Q ++EI D+ M RLLQGDVG GKTVVA A
Sbjct: 240 YDLKEIAQLTSSLPFELSDDQKEVVNEIFADMHSSGQMRRLLQGDVGSGKTVVAVYAIFA 299
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
I +GYQ A MVPTE+LATQH++ + +LL + ++ALLTG+T + R I ++L
Sbjct: 300 AITAGYQVALMVPTEILATQHFKKIDELLRPL-----GVRVALLTGNTKTLERREIYREL 354
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
G I ++IGTH+LI E V F L L I+DEQ RFGV QR A++N
Sbjct: 355 MDGTINVMIGTHALIQENVIFKKLGLVIIDEQHRFGVGQR---------------QALIN 399
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
K DQ P +LAM+ATPIPRTLAL +YGDM++++I +P GR PI
Sbjct: 400 -----KGDQ---PDILAMTATPIPRTLALTVYGDMTVSEIHHMPAGRKPI 441
>gi|94985241|ref|YP_604605.1| ATP-dependent DNA helicase RecG [Deinococcus geothermalis DSM
11300]
gi|94555522|gb|ABF45436.1| ATP-dependent DNA helicase RecG [Deinococcus geothermalis DSM
11300]
Length = 776
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 167/518 (32%), Positives = 252/518 (48%), Gaps = 90/518 (17%)
Query: 223 HQLENCGFYTLRKLLHHFPRTYADLQNAQIDL---DDGQYFIFIGEIISSRGMKAGCSFS 279
+L++ G +TLR +LH +P + D + A DL ++GQ G +++ K +
Sbjct: 114 RKLQSLGLHTLRDVLHAYPHRHED-RRALPDLAAVEEGQKVTVEGRVVTKARRKPKPNLL 172
Query: 280 FLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKV 339
+E A ET +G V R + F P+ +E + +
Sbjct: 173 IVE-------ATLETPAGGRV-------------------RASWFNQ-PW---VERQLRE 202
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRD 399
G + ++G+V+ R ++ +++ L+D + SL + GR +Y SK G++ LR
Sbjct: 203 GARLVLTGRVK--RFGRTVQLGVEHLETLEDARE-SL-STGRIVGVYDSKEGISQEFLRR 258
Query: 400 TIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYL 459
RALQA P + D +P +E GL L DA GIH P + A RL FDE+ +L
Sbjct: 259 VAFRALQAAPLD-DYLPAHWRRERGLTDLADALWGIHFPAGEAQLKRALHRLRFDEYLFL 317
Query: 460 QLGRLYQMLEG--LGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQL 517
+L L Q + LG +F+ G ++ ALP+ LT +Q
Sbjct: 318 ELRMLLQGEDAVLLGKRFQATG-------------------EDIERFEAALPFRLTGAQR 358
Query: 518 SAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHY 577
+ EI+ D++ M RL+QGDVG GKT VA A + GYQ A M PTE+LA QHY
Sbjct: 359 RVLLEIVADMRSERQMARLVQGDVGSGKTAVAAAALYLAVRDGYQGALMAPTEILARQHY 418
Query: 578 EHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFS 637
+LL L ++ ++ LL G+ K ++ + GD+ +V+GT +LI E V F+
Sbjct: 419 ANLLGYLAKLD-----VRVGLLIGAMTPKAKLEMQTRIAEGDVDVVVGTQALIQENVRFN 473
Query: 638 ALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATP 697
L LA+VDE+ RFGV+QR R + P VL MSATP
Sbjct: 474 NLGLAVVDEEHRFGVMQRRRLLTG-------------------------RPDVLVMSATP 508
Query: 698 IPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
IPR+LAL YGD+ L+ I +LPPGR P++T +I+ +
Sbjct: 509 IPRSLALTAYGDLELSVIDELPPGRTPVETKLIQDTHR 546
>gi|418008211|ref|ZP_12648079.1| ATP-dependent DNA helicase [Lactobacillus casei UW4]
gi|410547155|gb|EKQ21393.1| ATP-dependent DNA helicase [Lactobacillus casei UW4]
Length = 679
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 168/545 (30%), Positives = 248/545 (45%), Gaps = 101/545 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L ++ +PG+ + L + G +T+R LL +FP Y DL+ +
Sbjct: 3 LTDPVTVLPGVGPKREAGLASLGIHTIRDLLFYFPYRYDDLKVKDL-------------- 48
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNID--------SGQKKKIYLHLKKF 318
E AD E + +V D + + L +++
Sbjct: 49 --------------------AEAADQEKLTVKGIVVTDPVISRFGPHRSRVNVKLQIERS 88
Query: 319 FRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRA 378
F + P+LK + ++G+ + GK A R + + I + +D S+ A
Sbjct: 89 VILVTFFNQPWLKD---RFQMGDEAAIFGKWDAKRRS----LTGMKILATQSQDQPSMAA 141
Query: 379 KGRPYPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQ 437
IY + L D I A + N D VP I + + L+ G+H
Sbjct: 142 ------IYTVNKNVRMGTLLDLIKAAWKRDQQNINDLVPASIREHYRLMSDAQLVHGMHF 195
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGW 497
P EA AR+ +F EFF QL Q L+ L GL Y L A
Sbjct: 196 PDTPAEAKAARRTGVFREFFLFQLQ--IQALKQLNAN-SSNGLAIPYDNQALRA------ 246
Query: 498 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
L+ LP++LT++Q ++EI D+++P MNRLLQGDVG GKTVVA + +
Sbjct: 247 ------LIATLPFALTNAQKRVVNEICADMRRPNHMNRLLQGDVGSGKTVVAAIVLYAAV 300
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
+G+QAA MVPTE+LA QH+ L KL + K+ LLTGST K+ R + +L+
Sbjct: 301 TAGFQAALMVPTEVLAEQHFAKLTKLFKDFP-----VKLGLLTGSTSTKRRRELLSELRD 355
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
G + L+IGTH+LI + V+F AL L ++DEQ RFGV QR K
Sbjct: 356 GRLNLIIGTHALIQKGVDFHALGLVVIDEQHRFGVNQRKILQEK---------------- 399
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGY 737
P +L+M+ATPIPRTLA+ YG+M ++ I +LP GR PI T + N+
Sbjct: 400 -------GQKPDLLSMTATPIPRTLAITAYGEMDVSTIDELPAGRKPIATTWLRKNQ--I 450
Query: 738 ENVYK 742
+ VY+
Sbjct: 451 DQVYR 455
>gi|403718452|ref|ZP_10943328.1| ATP-dependent DNA helicase RecG [Kineosphaera limosa NBRC 100340]
gi|403208473|dbj|GAB98011.1| ATP-dependent DNA helicase RecG [Kineosphaera limosa NBRC 100340]
Length = 779
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 163/537 (30%), Positives = 249/537 (46%), Gaps = 87/537 (16%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI--ISSRGMKAGCSFSFLEV 283
+ G T+ LL PR Y D Q + +G+Y + G + ++ R M +G S L V
Sbjct: 22 QQRGLQTVEDLLWFLPRRYLDGQEELTEFTEGEYVVLEGTVRTVAKRPM-SGRRRSMLNV 80
Query: 284 IVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSI-EGKHKVGEF 342
++ + D E T +Y H + IP K + EG+ VG +
Sbjct: 81 LISTAVGDLEVTF------------FSVYGHQDRL--------IPGAKGLFEGR--VGRY 118
Query: 343 VCVSGKVRAMRSNNHYEM-REYNIDVLKDEDDLSLRAKGRP----------YPIYPSKGG 391
R S+ YEM + + D + LR +G +P+Y G
Sbjct: 119 GS-----RWQLSHPSYEMLSDLDDDAPTPDAGHGLRDQGGTPGLGVVARALHPVYLEVRG 173
Query: 392 LNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRL 451
+ + + +A L A+ + DP+P E+ + L A +H P+H D+ +KRL
Sbjct: 174 VPSWTINRLVATVLGAMSDDGDPLPAELRRRRDLPGYVAAMRHLHLPEHRDDVAKGKKRL 233
Query: 452 IFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYS 511
+DE +QL LG + + + P + A +G L + + LP++
Sbjct: 234 KYDEALLMQLA--------LGMRRRAQ-----QQAPAVPRAPRQG--GLLEAFDKRLPFT 278
Query: 512 LTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTEL 571
LT+ Q + EI DL + PMNRLLQG+VG GKTVVA A + VI +G QAA + PTE+
Sbjct: 279 LTAGQRAVGEEIAADLARSHPMNRLLQGEVGSGKTVVALRAMLAVIDAGGQAALLAPTEV 338
Query: 572 LATQHYEHLLKLLDNMEED-------KHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
LA QHY + LL ++ + ++ALLTGS + +G+ +V+
Sbjct: 339 LAAQHYRTITTLLGDLAQGGMLGGDLDRGTRVALLTGSQSAAARKQALLAAASGEAGIVV 398
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+LI + V+ + L L +VDEQ RFGV QR K
Sbjct: 399 GTHALIQKHVQLADLGLVVVDEQHRFGVEQRDALREK----------------------A 436
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVY 741
PHVL M+ATPIPRT+A+ ++GDM + + +LP GR PI ++++ GN YE +
Sbjct: 437 KKPPHVLVMTATPIPRTVAMTVFGDMDTSVLAELPAGRQPIGSFVV-GNRLWYERTW 492
>gi|260101410|ref|ZP_05751647.1| DNA helicase RecG [Lactobacillus helveticus DSM 20075]
gi|260084750|gb|EEW68870.1| DNA helicase RecG [Lactobacillus helveticus DSM 20075]
Length = 679
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 173/530 (32%), Positives = 251/530 (47%), Gaps = 97/530 (18%)
Query: 203 IEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFI 261
IE L ++ + G+ + L + G Y++ LL +FP Y +LQ +D + DGQ +
Sbjct: 5 IENALFAPVTDLKGVGTKTAADLGSLGIYSIYDLLFYFPFRYDELQTLPLDQIMDGQKVV 64
Query: 262 FIG----EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK 317
G E SR SF + +V+ ++
Sbjct: 65 LKGFVATEPFVSRFGYKKSRLSF------------KMRIDHDVIMVN------------- 99
Query: 318 FFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLR 377
F + P+LKS K ++GE V + GK R + + + K+ D
Sbjct: 100 ------FFNQPWLKS---KIEIGEEVAIYGKYNVARQS----LSAFKFIAAKEND----- 141
Query: 378 AKGRPYPIYPSKGGLNASLLRDTIARALQA-LPANFDPVPKEITQEFGLLCLFDAYMGIH 436
PIYP + L I A+ L D VP+ I +++ LL + +H
Sbjct: 142 --SGMAPIYPVNRHVKQKKLVSLINLAIDVFLDQVRDIVPENIREKYRLLTDQEIIQKMH 199
Query: 437 QPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG 496
PK+ EA+LA++ IF EFF +L +L + G Q A Y +
Sbjct: 200 HPKNSTEANLAKRSAIFREFFIFEL-QLALLANHDGKQ----------------AGYPKN 242
Query: 497 WS-SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
+ +L +LP+ L+ Q ++EI D+ M RLLQGDVG GKTVVA A
Sbjct: 243 YDLKEIAQLTSSLPFELSDDQKEVVNEIFADMHSSGQMRRLLQGDVGSGKTVVAVYAIFA 302
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
I +GYQ A MVPTE+LATQH++ + +LL + ++ALLTG+T + R I ++L
Sbjct: 303 AITAGYQVALMVPTEILATQHFKKIDELLRPL-----GVRVALLTGNTKTLERREIYREL 357
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
G I ++IGTH+LI E V F L L I+DEQ RFGV QR A++N
Sbjct: 358 MDGTINVMIGTHALIQENVIFKKLGLVIIDEQHRFGVGQR---------------QALIN 402
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
K DQ P +LAM+ATPIPRTLAL +YGDM++++I +P GR PI
Sbjct: 403 -----KGDQ---PDILAMTATPIPRTLALTVYGDMTVSEIHHMPAGRKPI 444
>gi|407002043|gb|EKE18901.1| hypothetical protein ACD_9C00202G0001, partial [uncultured
bacterium]
Length = 667
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 133/367 (36%), Positives = 200/367 (54%), Gaps = 41/367 (11%)
Query: 380 GRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPK 439
GR PIYP GL + +R + ++ + DP+P+ I L + A IH PK
Sbjct: 117 GRLVPIYPETEGLTSKWIRWQMQNLIKHVDELSDPIPENILHGLHLPDISTAVKYIHFPK 176
Query: 440 HIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSS 499
++E LA+KR F + F +Q+ + + + ++++ NA + S
Sbjct: 177 TLEEFQLAQKRFAFQQMFLVQI-----VTQQIKRSWDQQ-----------NAVSIPFHES 220
Query: 500 LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
K + +LP++LT++Q + +I DL++ VPMNRLL GDVG GKTVVA +A + I +
Sbjct: 221 SVKNFVSSLPFTLTNAQRKSAFQIFKDLEKKVPMNRLLNGDVGSGKTVVAAMASLGAINA 280
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
GYQ + M PTE+LA QH+ + KL +N KI LLT S+ + K+ +
Sbjct: 281 GYQVSIMAPTEVLAKQHFINFCKLFENF-----NTKIGLLTSSSKLLNQEFRIKNHDSNF 335
Query: 620 I----TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
I ++VIGTHSLI EKV+F L L I+DEQ RFGV QR K+ + ++ G+A
Sbjct: 336 IVHNSSIVIGTHSLIQEKVKFKNLALVIIDEQHRFGVQQRAFLQQKIEH--INDGLA--- 390
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII--EGN 733
PH+L+M+ATPIPRTLAL +G+++L+ + ++P R PI T +I
Sbjct: 391 ---------GKIPHLLSMTATPIPRTLALTFFGNLNLSLLDEMPKNRKPIITDLIGPRDR 441
Query: 734 EKGYENV 740
+K YE V
Sbjct: 442 KKIYEQV 448
>gi|427406116|ref|ZP_18896321.1| ATP-dependent DNA helicase RecG [Selenomonas sp. F0473]
gi|425708957|gb|EKU71996.1| ATP-dependent DNA helicase RecG [Selenomonas sp. F0473]
Length = 688
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 126/347 (36%), Positives = 187/347 (53%), Gaps = 43/347 (12%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHID 442
P+Y + GL LR A AL+ A + +P + +E+GL+ DA+ IH PK +
Sbjct: 152 PVYAATEGLTQKQLRGMTAYALKESAAELTETLPAAVREEYGLIGRADAFRQIHFPKRAE 211
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
E AR+RL F+E + +Q G L + E++G+ R N A++
Sbjct: 212 ELSAARRRLAFEELYLIQCGLLAIKKR---SAEEQQGIAH-----RPNGAHIAA------ 257
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
+L ALP++LT Q + E+ D++ P+PM RL+QGDVG GKT +A LA ++ + SGYQ
Sbjct: 258 -VLEALPFTLTEDQQTVWEEVARDMESPLPMRRLVQGDVGSGKTAIALLALVKTVESGYQ 316
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
A M PTE+LA QHY++L +LL ++ L G K L ++ +
Sbjct: 317 GALMAPTEILARQHYDYLSELL-----TPRGIRVGFLAGRLAKKARAETDAALAAHEVDI 371
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
V+GTH+LI ++V F+AL L + DEQ RFGV QR K SG
Sbjct: 372 VVGTHALIEDRVAFAALGLVVTDEQHRFGVAQRAALEKK-------SG------------ 412
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYI 729
+ P VL M+ATPIPRT+ L +YGD+ +++I LPPGR ++T++
Sbjct: 413 ---ITPDVLVMTATPIPRTMTLTVYGDLDVSRIEHLPPGRRAVRTFL 456
>gi|78188306|ref|YP_378644.1| ATP-dependent DNA helicase RecG [Chlorobium chlorochromatii CaD3]
gi|78170505|gb|ABB27601.1| ATP-dependent DNA helicase RecG [Chlorobium chlorochromatii CaD3]
Length = 706
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 175/545 (32%), Positives = 257/545 (47%), Gaps = 96/545 (17%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFIGEII 267
++ + G+ R L G T+ LL ++PR Y D ++ + L DG+ +G I+
Sbjct: 6 SVAFLKGVGSRKAVVLGEVGIVTVDDLLAYYPRRYLDRRSIKRVRALVDGELTTVVGTIV 65
Query: 268 SSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVN--IDSGQKKKIYLHLKKFFRGTRFT 325
++ LE + TSG +D G L L +FR R+
Sbjct: 66 RTQ----------LE----------QPTSGKARFKAWLDDGSG---LLELT-WFRSVRYF 101
Query: 326 SIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVL---------KDEDDLSL 376
S F K GE + V GKV N +M+ + D L K DD +L
Sbjct: 102 SRFFTK--------GESLAVHGKVSFF--GNQAQMQHPDYDRLTPENAVGGEKGSDDFAL 151
Query: 377 RAKGRPYPIYPS-----KGGLNASLLRDTIARALQALP-ANFDPVPKEITQEFGLLCLFD 430
G P+Y + + GL + LR I RAL+ +P + +P I +++GL+ ++
Sbjct: 152 FNTGAIIPLYHTTEAMKQAGLASRQLRVLIKRALEEVPFREQENLPLSIIRQYGLIPQWE 211
Query: 431 AYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLN 490
A IH P ++ + AR RL + E FY QL L+ + + L + R
Sbjct: 212 AEREIHLPSSPEKLEQARYRLKWTELFYAQL--LFAL---------RRSTLRRNRA---- 256
Query: 491 AAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAF 550
A LT+KL +LPY LT Q A+ +I DL+ PMNRLLQGDVG GKT+VA
Sbjct: 257 AVRFTHSGELTRKLHESLPYQLTEGQKQAVRDIYRDLRSGSPMNRLLQGDVGAGKTMVAM 316
Query: 551 LACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRM 610
A + +G QA M PTE+LA QH + + + ++ LLTG K+ R
Sbjct: 317 FAMALAVDNGLQAMVMAPTEILAVQHALVMKRFFAPL-----GIELGLLTGKQGKKERRA 371
Query: 611 IRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSG 670
+ L+TGD+ LV+GTH+L+ V+++ L I+DEQ RFGV+QR K
Sbjct: 372 TLEKLRTGDMQLVVGTHALLEPDVQYANPGLVIIDEQHRFGVLQRKALQEKA-------- 423
Query: 671 MAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
PHVL M+ATPIPRTL++ ++GD+ L+ I D P GR PIKT +
Sbjct: 424 ---------------ANPHVLLMTATPIPRTLSMGMFGDLDLSIIRDKPVGRQPIKTVLK 468
Query: 731 EGNEK 735
+ +K
Sbjct: 469 KEQDK 473
>gi|399023775|ref|ZP_10725828.1| ATP-dependent DNA helicase RecG [Chryseobacterium sp. CF314]
gi|398082110|gb|EJL72872.1| ATP-dependent DNA helicase RecG [Chryseobacterium sp. CF314]
Length = 694
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 125/358 (34%), Positives = 192/358 (53%), Gaps = 55/358 (15%)
Query: 380 GRPYPIYPS-----KGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYM 433
R PIYPS K GLN + + + +P+ + +P + + F L Y+
Sbjct: 142 NRLKPIYPSSEKLTKRGLNQKFFQTILRNICKEIPSLIQENLPDYLIKSFKFLSRQHTYL 201
Query: 434 GIHQPKHIDEADLARKRLIFDEFFYLQLG----RLYQMLEGLGTQFEKEGLLDKYRKPRL 489
IH P++++ + A RL F+E F+ QLG +L+Q + G F G
Sbjct: 202 NIHFPQNLEYFERANNRLKFEESFFFQLGYVLKKLHQKSQSFGNPFPIVG---------- 251
Query: 490 NAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVA 549
Y G+ LP+ LT++Q + EI D+K+PV MNRLLQGDVG GKT+VA
Sbjct: 252 --DYFTGFYE------NHLPFELTNAQKRVLKEIRLDMKKPVQMNRLLQGDVGSGKTMVA 303
Query: 550 FLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSR 609
L + + +G+Q+ M PTE+LA QHY + LL + + LLTGST + +
Sbjct: 304 LLTMLIAMDNGFQSCMMAPTEILAQQHYNGIKDLLRETNIN-----VRLLTGSTKASERK 358
Query: 610 MIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSS 669
+I +L++G++++++GTH+++ +KV+F L LAI+DEQ RFGV QR + +K
Sbjct: 359 IIHAELESGELSILVGTHAVLEDKVKFKNLGLAIIDEQHRFGVAQRAKLWAK-------- 410
Query: 670 GMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PH+L M+ATPIPRTLA++ Y D+ ++ I ++P GR PI T
Sbjct: 411 --------------NKIPPHILVMTATPIPRTLAMSFYSDLDVSVIDEMPVGRKPIIT 454
>gi|336053912|ref|YP_004562199.1| DNA helicase RecG [Lactobacillus kefiranofaciens ZW3]
gi|333957289|gb|AEG40097.1| DNA helicase RecG [Lactobacillus kefiranofaciens ZW3]
Length = 676
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 169/521 (32%), Positives = 247/521 (47%), Gaps = 95/521 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIG----E 265
++ + G+ + L + G Y++ LL +FP Y +LQ +D + DGQ + G E
Sbjct: 10 VTNLKGVGTKTAADLGSLGIYSIYDLLFYFPFRYDELQTLPLDQIMDGQKVMLKGIVATE 69
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFT 325
SR SF + +++ ++ F
Sbjct: 70 PFVSRFGYKKSRLSF------------KMRIDHDIIMVN-------------------FF 98
Query: 326 SIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPI 385
+ P+LKS K ++G+ V + GK R + + + K+ D PI
Sbjct: 99 NQPWLKS---KIEIGQEVAIYGKYNVARQS----LSAFKFVAAKEND-------SGIAPI 144
Query: 386 YPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
YP + L I A+ D VPKEI Q++ LL + +H P + EA
Sbjct: 145 YPLNRHVKQKKLVTLINLAIDDFLEQVKDIVPKEIRQKYRLLTDREIIQKMHHPNNGREA 204
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
++A++ IF EFF +L +L + G Q +G Y + KL
Sbjct: 205 EIAKRSAIFREFFIFEL-QLALLTRNDGQQ---KGYPKDYDLKEI------------AKL 248
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
+LP+ L++ Q ++EI DL M RLLQGDVG GKTVVA A I +GYQAA
Sbjct: 249 TSSLPFELSADQKQVVNEIFADLHSERQMRRLLQGDVGSGKTVVAIYAIFSAITAGYQAA 308
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
MVPTE+LATQH++ + +LL + ++ALLTG+T + R I ++L G I +VI
Sbjct: 309 LMVPTEILATQHFKKIDELLRPL-----GVRVALLTGNTKTLERREIYRELTDGTINVVI 363
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+LI + V F L L I+DEQ RFGV QR A++N +P
Sbjct: 364 GTHALIQKNVIFKKLGLVIIDEQHRFGVGQR---------------QALINKGDNPD--- 405
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
+LAM+ATPIPRTLAL +YGDM++++I LP GR PI
Sbjct: 406 -----ILAMTATPIPRTLALTVYGDMTVSEIHHLPSGRKPI 441
>gi|418011049|ref|ZP_12650818.1| ATP-dependent DNA helicase [Lactobacillus casei Lc-10]
gi|410553097|gb|EKQ27105.1| ATP-dependent DNA helicase [Lactobacillus casei Lc-10]
Length = 679
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 167/541 (30%), Positives = 247/541 (45%), Gaps = 101/541 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
++ +PG+ + L + G +T+R LL +FP Y DL+ +
Sbjct: 7 VTVLPGVGPKREAGLASLGIHTIRDLLFYFPYRYDDLKVKDL------------------ 48
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNID--------SGQKKKIYLHLKKFFRGT 322
E AD E + +V D + + L +++
Sbjct: 49 ----------------AEAADQEKLTVKGIVVTDPVISRFGPHRSRVNVKLQIERSVILV 92
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+LK + ++G+ + GK A R + + I + +D S+ A
Sbjct: 93 TFFNQPWLKD---RFQMGDEAAIFGKWDAKRRS----LTGMKILATQSQDQPSMAA---- 141
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
IY + L D I A + N D VP I + + L+ G+H P
Sbjct: 142 --IYTVNKNVRMGTLLDLIKAAWEHDQQNINDLVPASIREHYRLMSDAQLVHGMHFPDTP 199
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
EA AR+ +F EFF QL Q L+ L GL Y L A
Sbjct: 200 AEAKAARRTGVFREFFLFQLQ--IQALKQLNAN-SSNGLAIPYDNQALRA---------- 246
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
L+ LP++LT++Q ++EI D+++P MNRLLQGDVG GKTVVA + + +G+
Sbjct: 247 --LIATLPFALTNAQKRVVNEICADMRRPNHMNRLLQGDVGSGKTVVAAIVLYAAVTAGF 304
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
QAA MVPTE+LA QH+ L KL + K+ LLTGST K+ R + +L+ G +
Sbjct: 305 QAALMVPTEVLAEQHFAKLTKLFKDF-----PVKLGLLTGSTSTKKRRELLSELRDGRLN 359
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
L+IGTH+LI + V+F AL L ++DEQ RFGV QR K
Sbjct: 360 LIIGTHALIQKGVDFHALGLVVIDEQHRFGVNQRKILQEK-------------------- 399
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVY 741
P +L+M+ATPIPRTLA+ YG+M ++ I +LP GR PI T + N+ + VY
Sbjct: 400 ---GQKPDLLSMTATPIPRTLAITAYGEMDVSTIDELPAGRKPIATTWLRKNQ--IDQVY 454
Query: 742 K 742
+
Sbjct: 455 R 455
>gi|328957308|ref|YP_004374694.1| ATP-dependent DNA helicase RecG [Carnobacterium sp. 17-4]
gi|328673632|gb|AEB29678.1| ATP-dependent DNA helicase RecG [Carnobacterium sp. 17-4]
Length = 682
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 161/528 (30%), Positives = 247/528 (46%), Gaps = 92/528 (17%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIIS 268
+S +P + ++ L G +T+ LL H+P Y D+Q + +++D + G ++S
Sbjct: 8 SVSVLPYVGEKRLEALHQLGIHTISDLLSHYPIRYEDIQEKDLLEIEDQEKVTLKGNVVS 67
Query: 269 ----SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
SR SF +I I T F
Sbjct: 68 EAVVSRFGPKKNRLSFRLIIEHAVITVT-------------------------------F 96
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ +LKS K GE + V GK A R + + +K S +G
Sbjct: 97 FNQAYLKS---KIVTGEEIAVFGKWDAKRKS---------LTGMKILGSKSGSEQGDFES 144
Query: 385 IYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
+Y + + S + I A + + + +P E+ ++ L+ DA +H P ++
Sbjct: 145 VYSANKHIKQSTILQLITEAFKIYQEHIPEVIPAELRTKYRLISHHDAVYAMHFPASEEQ 204
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
AR+ ++F+EF LYQM + ++ K +K + + +
Sbjct: 205 KKQARREVVFEEFL------LYQM---------RMQIVRKKQKAMGKGNILNYNVNDLRN 249
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
+ LP+ LT++Q ++EI DL+QP+ M+RLLQGDVG GKT+VA +A G Q+
Sbjct: 250 FIETLPFELTTAQKRVVNEICSDLRQPIHMHRLLQGDVGSGKTIVAAIALYAATNVGVQS 309
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A MVPT +LA QH E L +L D +E +IALLTGST K+ R+I + L G++ ++
Sbjct: 310 ALMVPTGILAEQHMESLTELFDPLE-----VRIALLTGSTKTKERRIILEQLANGELDVL 364
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
IGTH+LI + V FS L L I DEQ RFGV QR ++ G D
Sbjct: 365 IGTHALIQQDVYFSRLGLVITDEQHRFGVNQR----------------KLLRDKGKDAD- 407
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
VL M+ATPIPRTLA+ YG+M ++ I ++P GRIPI+T I+
Sbjct: 408 ------VLFMTATPIPRTLAITAYGEMDVSIIDEMPAGRIPIQTTWIK 449
>gi|51892522|ref|YP_075213.1| ATP-dependent DNA helicase RecG [Symbiobacterium thermophilum IAM
14863]
gi|51856211|dbj|BAD40369.1| ATP-dependent DNA helicase [Symbiobacterium thermophilum IAM 14863]
Length = 709
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 163/529 (30%), Positives = 238/529 (44%), Gaps = 86/529 (16%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFIG 264
L + + G+ L G T+R L+ PR Y D + +GQ +G
Sbjct: 21 LSMPVQYLKGIGPARARDLAKQGIATVRDLIERVPRAYRDYSQIKPIAQAQNGQPESLMG 80
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
++ + + VI I+D T+ N Q K+ + +K F GT
Sbjct: 81 TVVMVDDRRVRGNLHLTRVI----ISDGSGTAAGVWFN-QPWQAKRFPVGMKVLFAGT-- 133
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ G + ++ N +E+ ID D L GR P
Sbjct: 134 -----------VERRGAQIQIT--------NPEWEI----IDEESSSDPLH---AGRIVP 167
Query: 385 IYPSKGGLNASLLRDTIARALQ-ALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
+YP GGLN +R + ALQ A D +P + + GL+ +A+ IH P +
Sbjct: 168 VYPLTGGLNPRDVRRAVYLALQTAADLMPDTIPGPVRERQGLMPAAEAWRAIHFPDSGGQ 227
Query: 444 ADLARKRLIFDEFFYLQLG----RLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSS 499
+ AR L F+E F LQ+G R ++E G +G
Sbjct: 228 RERARATLAFEELFVLQVGLALVRRQTVVEQAGIAHGPDG-------------------E 268
Query: 500 LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
+T++L LP+ LT++Q I ++ D++ PMNRL+QGDVG GKT+VA A + + S
Sbjct: 269 VTRRLRAGLPFRLTAAQERVIRQVAADMESSRPMNRLVQGDVGSGKTMVAVFALAKAVDS 328
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
G+Q A M PTE+LA QHY +L ++ + + + L++GS K+ LQ G
Sbjct: 329 GHQGALMAPTEILAEQHYLNLRRIFAPLGVE-----VVLVSGSLTKKERDANLGLLQMGA 383
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
+ +GTH+LI ++V F L L I DEQ RFGV QR R K G M
Sbjct: 384 AHIAVGTHALIEDRVAFKDLSLVITDEQHRFGVRQRARLQQK--------GEVM------ 429
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTY 728
P L M+ATPIPRTLAL LYGD+ ++ I +LPPGR P+ TY
Sbjct: 430 --------PDTLVMTATPIPRTLALTLYGDLDVSVIDELPPGRRPVGTY 470
>gi|339009287|ref|ZP_08641859.1| ATP-dependent DNA helicase RecG [Brevibacillus laterosporus LMG
15441]
gi|338773765|gb|EGP33296.1| ATP-dependent DNA helicase RecG [Brevibacillus laterosporus LMG
15441]
Length = 684
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 162/532 (30%), Positives = 250/532 (46%), Gaps = 98/532 (18%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIG 264
LL +S + G+ LE G Y+++ L+ +FP Y D + + ++ + +G
Sbjct: 4 LLAGPVSNLYGIGAERAKDLEALGIYSIKDLVEYFPSRYEDYRIRDLTEVKHEERVTLVG 63
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
T G+ V KKK + +K
Sbjct: 64 -----------------------------TVYGEPSVRFFG--KKKSRISVKLVMDRVVV 92
Query: 325 TSIPFLKS-IEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP- 382
T++ F + ++ + G+ + V+GK ++ + I V + S RAK R
Sbjct: 93 TAVWFNQMYVKTQLSTGKEIVVTGK---------WDKHKLQITVSEMTQKDSPRAKKRND 143
Query: 383 -YPIYPSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKH 440
P+YP G+N LR TI AL+ + P E+ + + LL +A IH P +
Sbjct: 144 LVPVYPLSAGVNLLFLRKTIQHALEKYGKLIPEILPPELVERYRLLPRHEAIELIHFPGN 203
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSS- 499
E AR+R++F+E F Q+ + +R R+ EG +
Sbjct: 204 AQEGHQARRRIMFEELFLFQVK------------------MQAFR--RITRQQTEGIAQA 243
Query: 500 ----LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
L ++ +R+LP+ LT +Q + E++ D++ P MNRLLQGDVG GKTVVA +A
Sbjct: 244 IPLELVREFVRSLPFPLTGAQKRVVKEVLDDMQAPYAMNRLLQGDVGSGKTVVAAIALYA 303
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
+ +G+Q A MVPTE+LA QH L LL+ + +IALL+GS K+ R + + L
Sbjct: 304 TVKAGFQGALMVPTEILAEQHLHSLTGLLEPL-----GLRIALLSGSVTGKKRRELLETL 358
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
Q+G + +V+GTH+LI + V FS L L I DEQ RFGV QR +K
Sbjct: 359 QSGSLDVVVGTHALIQDDVFFSKLGLVITDEQHRFGVEQRRVLRNK-------------- 404
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ P VL M+ATPIPRTLA+ +GDM ++ I ++P GR P++T
Sbjct: 405 ---------GLCPDVLFMTATPIPRTLAITAFGDMDVSVIDEMPAGRKPVET 447
>gi|395242494|ref|ZP_10419491.1| DNA helicase RecG [Lactobacillus pasteurii CRBIP 24.76]
gi|394480226|emb|CCI85731.1| DNA helicase RecG [Lactobacillus pasteurii CRBIP 24.76]
Length = 679
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 175/525 (33%), Positives = 254/525 (48%), Gaps = 94/525 (17%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGE 265
L K ++ + G+ + L + G Y++ LL++FP Y +LQ D L DGQ + G
Sbjct: 6 LFKPVTDLKGVGTKTAADLGSLGIYSIYDLLYYFPFRYDELQTLPFDQLMDGQKVLLKGI 65
Query: 266 IIS----SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRG 321
I + SR SF + ++V ++
Sbjct: 66 IATEPYLSRFGYKKSRLSF------------KLKIDHDIVMVN----------------- 96
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
F + P++KS + +VG+ + V GK R + + + + + K E++ +
Sbjct: 97 --FFNQPWVKS---QLEVGQEIAVYGKYELSRQS----LSAFKL-IAKKENESGMA---- 142
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKH 440
PIY + L I AL+ D VPK I ++ L+ D + +H PK+
Sbjct: 143 --PIYSVNRHIKQKKLVGLIDLALEEFADQIVDLVPKSIRSKYRLMNEKDLVLRMHHPKN 200
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
EA LA++ IF EFF QL L LG Q KE + +K LN
Sbjct: 201 GIEAQLAKRSAIFREFFIFQL-----QLAELGHQI-KENINGIPKKYDLNE--------- 245
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
K+L +LP+ L+ Q I+EI D+ M RLLQGDVG GKT+VA A I +G
Sbjct: 246 IKELTNSLPFELSDDQKQVINEIYADMHSGRQMRRLLQGDVGSGKTIVAVYAIFAAITAG 305
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQAA MVPTE+LATQH++ + +LL + ++ALLTG+T + R I ++L G I
Sbjct: 306 YQAALMVPTEILATQHFDKIEELLRPL-----GVRVALLTGNTKTLERREIYRELLDGTI 360
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+LI V F L L I+DEQ RFGV QR +++N P
Sbjct: 361 NVVIGTHALIQPNVIFKNLGLVIIDEQHRFGVAQR---------------QSLINK--GP 403
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
P +LAM+ATPIPRTLAL +YG+M++++I LP GR PI
Sbjct: 404 ------CPDILAMTATPIPRTLALTVYGEMAVSEIKHLPSGRKPI 442
>gi|301066660|ref|YP_003788683.1| recG-like helicase [Lactobacillus casei str. Zhang]
gi|300439067|gb|ADK18833.1| RecG-like helicase [Lactobacillus casei str. Zhang]
Length = 718
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 166/541 (30%), Positives = 247/541 (45%), Gaps = 101/541 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
++ +PG+ + L + G +T+R LL +FP Y DL+ +
Sbjct: 46 VTVLPGVGPKREAGLASLGIHTIRDLLFYFPYRYDDLKVKDL------------------ 87
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNID--------SGQKKKIYLHLKKFFRGT 322
E AD E + +V D + + L +++
Sbjct: 88 ----------------AEAADQEKLTVKGIVVTDPVISRFGPHRSRVNVKLQIERSVILV 131
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+LK + ++G+ + GK A R + + I + +D S+ A
Sbjct: 132 TFFNQPWLKD---RFQMGDEAAIFGKWDAKRRS----LTGMKILATQSQDQPSMAA---- 180
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
IY + L D I A + N D VP I + + L+ G+H P
Sbjct: 181 --IYTVNKNVRMGTLLDLIKAAWERDRQNINDLVPASIREHYRLMSDAQLVHGMHFPDTP 238
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
EA AR+ +F EFF QL Q L+ L GL Y L A
Sbjct: 239 AEAKAARRTGVFREFFLFQLQ--IQALKQLNAN-SSNGLAIPYDNQALRA---------- 285
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
L+ LP++LT++Q ++EI D+++P MNRLLQGDVG GKT+VA + + +G+
Sbjct: 286 --LIATLPFALTNAQKRVVNEICADMRRPNHMNRLLQGDVGSGKTIVAAIVLYAAVTAGF 343
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
QAA MVPTE+LA QH+ L KL + K+ LLTGST K+ R + +L+ G +
Sbjct: 344 QAALMVPTEVLAEQHFAKLTKLFKDFP-----VKLGLLTGSTSTKKRRELLSELRDGRLN 398
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
L+IGTH+LI + V+F AL L ++DEQ RFGV QR K
Sbjct: 399 LIIGTHALIQKGVDFHALGLVVIDEQHRFGVNQRKILQEK-------------------- 438
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVY 741
P +L+M+ATPIPRTLA+ YG+M ++ I +LP GR PI T + N+ + VY
Sbjct: 439 ---GQKPDLLSMTATPIPRTLAITAYGEMDVSTIDELPAGRKPIATTWLRKNQ--IDQVY 493
Query: 742 K 742
+
Sbjct: 494 R 494
>gi|256843386|ref|ZP_05548874.1| ATP-dependent DNA helicase RecG [Lactobacillus crispatus 125-2-CHN]
gi|256614806|gb|EEU20007.1| ATP-dependent DNA helicase RecG [Lactobacillus crispatus 125-2-CHN]
Length = 678
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 168/517 (32%), Positives = 250/517 (48%), Gaps = 87/517 (16%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGEIISS 269
++ + G+ + L + G Y++ LL +FP Y +LQ +D + DGQ + G I+++
Sbjct: 10 VTDLKGVGTKTTAALGSLGIYSIYDLLFYFPFRYDELQTLPLDQIMDGQKVMLKG-IVAT 68
Query: 270 RGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPF 329
+ + + I +V+ ++ F + P+
Sbjct: 69 EAFVSRFGYKKTRLSFKMRI-------DHDVIMVN-------------------FFNQPW 102
Query: 330 LKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSK 389
LK+ K +G+ V + GK R + + + K+ D PIYP
Sbjct: 103 LKN---KIDIGQEVAIYGKYNVARQS----LTAFKFVAAKEND-------SGMAPIYPVN 148
Query: 390 GGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLAR 448
+ L D I A+ D VP+++ QE+ LL +H PK+ EA+LA+
Sbjct: 149 RHVKQKKLVDLINVAIDDFIDQVQDIVPEKLRQEYRLLKDQVIIEKMHHPKNSHEAELAK 208
Query: 449 KRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRAL 508
+ IF EFF +L +L + G Q G KY + +L ++L
Sbjct: 209 RSAIFREFFIFEL-QLALLTRNDGKQM---GYAKKYDLTEI------------AQLTKSL 252
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
P+ L+ Q ++EI D+ M RLLQGDVG GKTVVA A I +GYQAA MVP
Sbjct: 253 PFELSDDQKHVVNEIFADMHSDSQMRRLLQGDVGSGKTVVAVYAIFAAITAGYQAALMVP 312
Query: 569 TELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHS 628
TE+LATQH++ + +LL + ++ALLTG+T + R I ++L G I +VIGTH+
Sbjct: 313 TEILATQHFKKIDELLRPL-----GVRVALLTGNTKTLERREIYRELTDGTINVVIGTHA 367
Query: 629 LIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAP 688
LI + V F L L I+DEQ RFGV QR A++N K DQ P
Sbjct: 368 LIQDSVIFKKLGLVIIDEQHRFGVGQR---------------QALIN-----KGDQ---P 404
Query: 689 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
+LAM+ATPIPRTLAL +YGDM++++I LP GR I
Sbjct: 405 DILAMTATPIPRTLALTVYGDMTVSEIHHLPAGRKSI 441
>gi|417999349|ref|ZP_12639559.1| ATP-dependent DNA helicase [Lactobacillus casei T71499]
gi|410539369|gb|EKQ13902.1| ATP-dependent DNA helicase [Lactobacillus casei T71499]
Length = 679
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 166/541 (30%), Positives = 247/541 (45%), Gaps = 101/541 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
++ +PG+ + L + G +T+R LL +FP Y DL+ +
Sbjct: 7 VTVLPGVGPKREAGLASLGIHTIRDLLFYFPYRYDDLKVKDL------------------ 48
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNID--------SGQKKKIYLHLKKFFRGT 322
E AD E + +V D + + L +++
Sbjct: 49 ----------------AEAADQEKLTVKGIVVTDPVISRFGPHRSRVNVKLQIERSVILV 92
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+LK + ++G+ + GK A R + + I + +D S+ A
Sbjct: 93 TFFNQPWLKD---RFQMGDEAAIFGKWDAKRRS----LTGMKILATQSQDQPSMAA---- 141
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
IY + L D I A + N D VP I + + L+ G+H P
Sbjct: 142 --IYTVNKNVRMGTLLDLIKAAWERDQQNINDLVPASIREHYRLMSDAQLVHGMHFPDTP 199
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
EA AR+ +F EFF QL Q L+ L GL Y L A
Sbjct: 200 AEAKAARRTGVFREFFLFQLQ--IQALKQLNAN-SSNGLAIPYDNQALRA---------- 246
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
L+ LP++LT++Q ++EI D+++P MNRLLQGDVG GKT+VA + + +G+
Sbjct: 247 --LIATLPFALTNAQKRVVNEICADMRRPNHMNRLLQGDVGSGKTIVAAIVLYAAVTAGF 304
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
QAA MVPTE+LA QH+ L KL + K+ LLTGST K+ R + +L+ G +
Sbjct: 305 QAALMVPTEVLAEQHFAKLTKLFKDF-----PVKLGLLTGSTSTKKRRELLSELRDGRLN 359
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
L+IGTH+LI + V+F AL L ++DEQ RFGV QR K
Sbjct: 360 LIIGTHALIQKGVDFHALGLVVIDEQHRFGVNQRKILQEK-------------------- 399
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVY 741
P +L+M+ATPIPRTLA+ YG+M ++ I +LP GR PI T + N+ + VY
Sbjct: 400 ---GQKPDLLSMTATPIPRTLAITAYGEMDVSTIDELPAGRKPIATTWLRKNQ--IDQVY 454
Query: 742 K 742
+
Sbjct: 455 R 455
>gi|160943140|ref|ZP_02090377.1| hypothetical protein FAEPRAM212_00625 [Faecalibacterium prausnitzii
M21/2]
gi|158445609|gb|EDP22612.1| ATP-dependent DNA helicase RecG [Faecalibacterium prausnitzii
M21/2]
Length = 686
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 165/557 (29%), Positives = 249/557 (44%), Gaps = 106/557 (19%)
Query: 197 LPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN----AQI 252
+P+E D + + G+ + + E G TL LL H+PR Y D A+
Sbjct: 1 MPTENRTTLTPDTPVRYLKGVGPKTAERFEKLGIVTLADLLCHYPRRYIDFSKPYSIAEA 60
Query: 253 DLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSG------ 306
D + E+ + G + +E I T+GD+V +++
Sbjct: 61 PAD--TECVVKAEVFAKPGGRILPGGRRMERI----------TAGDDVASLEITWFNNPY 108
Query: 307 QKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNID 366
+K+ L + +F+G + G +R N E
Sbjct: 109 ATQKLQLGQEYYFQG---------------------IVTGGMLRRQMVNPQVRTAE---- 143
Query: 367 VLKDEDDLSLRAKGRPY-PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGL 425
+ + P+ +YP GL +S++ I + L DP+P E+ Q++ L
Sbjct: 144 ----------QIQAAPFEAVYPQTEGLTSSVISRCIRQLLPHAELLPDPLPPEMLQKYRL 193
Query: 426 LCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYR 485
L +A IH P ++A AR+RLI++E LQLG + + R
Sbjct: 194 LPKAEAVRAIHCPATEEQAAAARRRLIYEELLVLQLG------------------IGRMR 235
Query: 486 KPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGK 545
A + ++LP+S T +Q A+ EI+ D+ MNRLLQGDVG GK
Sbjct: 236 NRGAAATGAPMRRADPSPFWQSLPFSPTGAQRRAVEEILTDMASETAMNRLLQGDVGSGK 295
Query: 546 TVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPV 605
T+VA A I +GYQAA + PTE+LA QH E L +LL ++ALLTG
Sbjct: 296 TLVAAAAIWACIRAGYQAALLAPTEILAAQHAEGLNRLLAPFGM-----RVALLTGGMKA 350
Query: 606 KQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYT 665
R ++ + LV+GTH+L++E VEF+ L LA++DEQ RFGV QRG K
Sbjct: 351 AARRTTLAAIRKDEADLVVGTHALMSEGVEFARLGLAVIDEQHRFGVRQRGALAEK---- 406
Query: 666 SMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
PH+L MSATPIPRTL L +YGD+ ++ + +LPPGR P+
Sbjct: 407 -------------------AANPHLLVMSATPIPRTLGLLIYGDLDISVLDELPPGRTPV 447
Query: 726 KTYIIEGNEKGYENVYK 742
KT I G + +++Y+
Sbjct: 448 KTRCITGKRR--QDLYR 462
>gi|217076377|ref|YP_002334093.1| ATP-dependent DNA helicase RecG [Thermosipho africanus TCF52B]
gi|217036230|gb|ACJ74752.1| ATP-dependent DNA helicase RecG [Thermosipho africanus TCF52B]
Length = 769
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 135/360 (37%), Positives = 200/360 (55%), Gaps = 46/360 (12%)
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHID 442
+PIYP GLN + +R I+ + + + +P ++ + LL ++ AY G+H P+
Sbjct: 234 FPIYPLTEGLNQNTVRRIISENIYNIYNFKEHLPDDLISKRDLLDVYQAYTGMHFPRSNF 293
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
AR RL ++E YLQ+ L E EK G + K + N Y +
Sbjct: 294 HKKAARYRLAYEEILYLQVAFLLSKKEN-----EKIGGISK----KFNGKY-------ST 337
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
+L+ +L + LT++Q A EI DLK PMNRLLQGDVG GKT+V+ LA ++ +G+Q
Sbjct: 338 ELINSLSFELTNAQKKAYEEIKNDLKSDKPMNRLLQGDVGSGKTIVSELAMLDNYEAGFQ 397
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
+A MVPT +LA Q+++ K+ D+ + K+ALL G+T + I++ L+ GDI +
Sbjct: 398 SAVMVPTSILAIQNFK---KIYDHF--SRFGIKVALLIGATSNSEKERIKQRLKDGDIDV 452
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
V+GTH+LI E V F L L ++DEQ RFGV QR SK G D
Sbjct: 453 VVGTHALIQEDVHFKNLGLVVIDEQHRFGVEQRKELISK----------------GKLVD 496
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYK 742
L M+ATPIPRTL+L+LYGD+ ++ I ++P GR PIKT+++ ++ E VYK
Sbjct: 497 -------TLVMTATPIPRTLSLSLYGDLDVSIIDEMPKGRKPIKTFVV--HQSKIEEVYK 547
>gi|120609293|ref|YP_968971.1| ATP-dependent DNA helicase RecG [Acidovorax citrulli AAC00-1]
gi|120587757|gb|ABM31197.1| ATP-dependent DNA helicase RecG [Acidovorax citrulli AAC00-1]
Length = 708
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 138/370 (37%), Positives = 197/370 (53%), Gaps = 49/370 (13%)
Query: 384 PIYPSKGGLNASLLRDTIARALQ------ALPANFDP-VPKEITQEFG---LLCLFDAYM 433
P+YP+ GL LR I ALQ +P +P +P+ + + G L DA +
Sbjct: 134 PVYPTTAGLPQPYLRRAIVSALQRVDLSETIPPGLEPPIPRFLGEGGGGRSWWTLRDALV 193
Query: 434 GIHQPKH-------IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRK 486
+H P D + A +RL +E QL +Q E + D+ R
Sbjct: 194 FLHHPTPDVALATLEDHSHPAWQRLKAEELLAQQL-----------SQLEAKRERDRLRA 242
Query: 487 PRLNAA-YMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGK 545
P L A EG ++L ++LL ALP+ LT++Q +EI DL + VPM+RLLQGDVG GK
Sbjct: 243 PVLRPAPGGEGGAALHERLLAALPFGLTAAQRRVCAEIAADLARAVPMHRLLQGDVGSGK 302
Query: 546 TVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPV 605
TVVA L+ + +G+Q A M PTE+LA QH+ L+ L+ + + ++A L G
Sbjct: 303 TVVAALSAAVCMDAGWQCALMAPTEILAEQHFRKLIGWLEPLLAASGR-RVAWLAGGQKK 361
Query: 606 KQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYT 665
K+ + +++G+ LV+GTH++I E+V F L LA++DEQ RFGV QR KL
Sbjct: 362 KERAAMLALVESGEAALVVGTHAVIQEQVRFRNLALAVIDEQHRFGVAQRLALRRKLA-- 419
Query: 666 SMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
DQ M PH+L MSATPIPRTLA++ Y D+ ++ I +LPPGR PI
Sbjct: 420 -----------------DQGMEPHLLMMSATPIPRTLAMSYYADLDVSTIDELPPGRTPI 462
Query: 726 KTYIIEGNEK 735
T +I + K
Sbjct: 463 VTKLIADSRK 472
>gi|403514788|ref|YP_006655608.1| ATP-dependent DNA helicase RecG [Lactobacillus helveticus R0052]
gi|403080226|gb|AFR21804.1| ATP-dependent DNA helicase RecG [Lactobacillus helveticus R0052]
Length = 676
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 175/530 (33%), Positives = 251/530 (47%), Gaps = 97/530 (18%)
Query: 203 IEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFI 261
IE L ++ + G+ + L + G Y++ LL +FP Y +LQ +D + DGQ +
Sbjct: 2 IENALFAPVTDLKGVGTKTAADLGSLGIYSIYDLLFYFPFRYDELQTLPLDQIMDGQKVV 61
Query: 262 FIG----EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK 317
G E SR SF I +V+ ++
Sbjct: 62 LKGIAATEPFVSRFGYKKNRLSFKMRI------------DHDVIMVN------------- 96
Query: 318 FFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLR 377
F + P+LKS K ++GE V + GK R + + + K+ D
Sbjct: 97 ------FFNQPWLKS---KIEIGEEVAIYGKYNVARQS----LSAFKFIAAKEND----- 138
Query: 378 AKGRPYPIYPSKGGLNASLLRDTIARALQA-LPANFDPVPKEITQEFGLLCLFDAYMGIH 436
PIYP + L I A+ L D VP+ I +++ LL + +H
Sbjct: 139 --SGMAPIYPVNRHVKQKKLVSLINLAIDGFLDQVRDIVPENIREKYRLLTDQEIIQKMH 196
Query: 437 QPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG 496
PK+ EA+LA++ IF EFF +L +L + G Q A Y +
Sbjct: 197 HPKNSTEANLAKRSAIFREFFIFEL-QLALLANHDGKQ----------------AGYPKN 239
Query: 497 WS-SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
+ +L +LP+ L+ Q ++EI D++ M RLLQGDVG GKTVVA A
Sbjct: 240 YDLKEITQLTSSLPFELSDDQKEVVNEIFADMQSSGQMRRLLQGDVGSGKTVVAVYAIFA 299
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
I +GYQ A MVPTE+LATQH++ + +LL + +ALLTG+T + R I ++L
Sbjct: 300 AITAGYQVALMVPTEILATQHFKKIDELLRPL-----GVIVALLTGNTKTLERREIYREL 354
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
G I +VIGTH+LI E V F L L I+DEQ RFGV QR A++N
Sbjct: 355 TDGTINVVIGTHALIQENVIFKKLGLVIIDEQHRFGVGQR---------------QALIN 399
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
K DQ P +LAM+ATPIPRTLAL +YGDM++++I +P GR PI
Sbjct: 400 -----KGDQ---PDILAMTATPIPRTLALTVYGDMTVSEIHHMPAGRKPI 441
>gi|257439260|ref|ZP_05615015.1| ATP-dependent DNA helicase RecG [Faecalibacterium prausnitzii
A2-165]
gi|257198302|gb|EEU96586.1| ATP-dependent DNA helicase RecG [Faecalibacterium prausnitzii
A2-165]
Length = 698
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 135/351 (38%), Positives = 189/351 (53%), Gaps = 46/351 (13%)
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
+YP GL+++++ I + L DP+P+E+ +++ LL DA IH P +EA
Sbjct: 165 VYPQTEGLSSTVIAKCIRQLLPHAELLPDPLPEEMLKKYRLLSKADAVRAIHCPATEEEA 224
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
AR+RLI++E LQLG +G + RL+ A W+SL
Sbjct: 225 FAARRRLIYEELLVLQLG--------IGRMKNRGSASTGAPMQRLDPAPF--WASL---- 270
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
P+S T +Q A+ EI+ DL MNRLLQGDVG GKT+VA A I SGYQAA
Sbjct: 271 ----PFSPTGAQRRAVDEILTDLSGSTSMNRLLQGDVGSGKTLVAAAAIWACIRSGYQAA 326
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
+ PTE+LA QH E+L ++L ++ALLTG R +++ + LV+
Sbjct: 327 LLAPTEILAAQHAENLNRMLAPFGM-----RVALLTGGMKAAARRTTLAAIRSDEADLVV 381
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH++++E VEF+ L LA+VDEQ RFGV QRG K
Sbjct: 382 GTHAILSEGVEFARLGLAVVDEQHRFGVRQRGMLAEK----------------------- 418
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
PH+L MSATPIPRTL L +YGD+ ++ + +LPPGR P+KT I G ++
Sbjct: 419 AANPHLLVMSATPIPRTLGLLIYGDLDISILDELPPGRKPVKTRCITGKKR 469
>gi|420154003|ref|ZP_14660935.1| putative ATP-dependent DNA helicase RecG [Actinomyces massiliensis
F0489]
gi|394756413|gb|EJF39514.1| putative ATP-dependent DNA helicase RecG [Actinomyces massiliensis
F0489]
Length = 766
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 163/542 (30%), Positives = 249/542 (45%), Gaps = 74/542 (13%)
Query: 219 KRLYHQLENC---GFYTLRKLLHHFPR---TYADLQNAQIDLDDGQYFIFIGEII--SSR 270
KR QL G T +LL PR T+ +L + + L DG+ E++ S+R
Sbjct: 25 KRTADQLAKLAKQGARTAGELLRLLPRRYDTWGELTDLRA-LTDGEQATIQAEVVRSSAR 83
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFL 330
+ G + +E V T+ T+ +VV F + +
Sbjct: 84 RTRGGRPPAIMEATV------TDGTTTMDVVM---------------------FGTAGLM 116
Query: 331 KSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNI-DVLKDEDDLSLRAKGRPYPIYPSK 389
K + G +SGKV R + + D L + + + RA RP PIYP+
Sbjct: 117 KHQADQLSPGTTALLSGKVGTHRGRKQLAGPRFQVLDELDEAEREAFRA--RPVPIYPAT 174
Query: 390 GGLNASLLRDTIARALQALPANF--DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA 447
L + + + L L A DP+P + + L+ + AY +H P+ ++ A
Sbjct: 175 EALPSWRVAKAVRTVLDQLDAADIPDPLPAHVREAHDLIDAYTAYRWVHMPQDAEQWRTA 234
Query: 448 RKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRA 507
R+RL ++E F LQ L Q + + P G SL L A
Sbjct: 235 RRRLRYEEAFVLQTA-LVQRR----ARHRATRTAVSWPAP--------GPDSLRADLDAA 281
Query: 508 LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMV 567
LPY LT+ Q ++ L VPM LLQGDVG GKT+VA A +V+G+G QAA +
Sbjct: 282 LPYELTAGQARVGEDLAAALDSTVPMQVLLQGDVGSGKTLVALRAMTQVVGAGGQAALLA 341
Query: 568 PTELLATQHYEHLLKLLDNMEE------DKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
PTE+LA QH+ L LL + + ++ LLTGSTP Q R I + G+
Sbjct: 342 PTEVLAAQHHSSLEGLLGPLGRAGMLGGAERATRVMLLTGSTPAPQRREILALMAAGEPA 401
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+V+GTH+L++E V+ +L L +VDEQ RFGV QR + +G A
Sbjct: 402 IVVGTHALLSETVQIPSLGLVVVDEQHRFGVAQRDALRERCGVIDPVTGAART------- 454
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGY-ENV 740
PH+L M+ATPIPRT+A+ ++GD+ + +LP GR P+ T+++ + + E +
Sbjct: 455 ------PHLLVMTATPIPRTIAMTVFGDLDTAVLDELPTGRRPVATHLVPWERQAWVEGI 508
Query: 741 YK 742
++
Sbjct: 509 WR 510
>gi|256425864|ref|YP_003126517.1| ATP-dependent DNA helicase RecG [Chitinophaga pinensis DSM 2588]
gi|256040772|gb|ACU64316.1| ATP-dependent DNA helicase RecG [Chitinophaga pinensis DSM 2588]
Length = 703
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 163/516 (31%), Positives = 248/516 (48%), Gaps = 95/516 (18%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFIGEIISSRGMKAGCSFSFLEV 283
+ G +T R LL++FP Y D N + I L ++ I RG + +EV
Sbjct: 28 KEIGVHTFRDLLYYFPFRYVDRTNVEKIISLHMQMDYVQI------RG-----KITRMEV 76
Query: 284 IVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFV 343
I T DE +G+ ++ ++ + T++ +L
Sbjct: 77 IGDKRAKRLVATLRDE-----TGEISLVWFQGWQWVEKSLQTNVAYL------------- 118
Query: 344 CVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY--PIYPSKGGLNASLLRDTI 401
V GK+ N + +M +D++ +E A G+ + P+Y + L A R
Sbjct: 119 -VFGKIAVF--NGYLQMSHPEMDLVTEET-----ATGKQFLEPVYYTTEKLKA---RGLT 167
Query: 402 ARALQALPANF----------DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRL 451
A+A+ L N + +P I Q++ L+ A+ IH P + D+A+LAR+RL
Sbjct: 168 AKAIGKLTKNLLEQLSPGEIPENIPTSILQQYRLMDRAKAHFKIHLPVNEDDANLARRRL 227
Query: 452 IFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYS 511
F+E F Q+ R+ ++ + Q G + N Y E LP++
Sbjct: 228 KFEELFIAQI-RICRL--KIRRQQSSRGFVFNTVGDAFNTFYNE-----------HLPFT 273
Query: 512 LTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTEL 571
LT +Q + EI D MNRL+QGDVG GKT+VA L + + +G+QA M PTE+
Sbjct: 274 LTGAQKRVLKEIRQDTATGRQMNRLIQGDVGSGKTMVALLTMLLAVDNGFQACLMAPTEI 333
Query: 572 LATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIA 631
L+ QHY+ + +LL+ M K+ALLTG+ K + I K ++ G+I ++IGTH+L+
Sbjct: 334 LSQQHYKSISELLEQM-----PVKVALLTGNVKGKARKQILKAVEEGEIHILIGTHALLE 388
Query: 632 EKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVL 691
+V F L +AIVDEQ RFGV QR R K M PH+L
Sbjct: 389 PQVVFKNLGMAIVDEQHRFGVAQRARLWQK----------------------NTMPPHIL 426
Query: 692 AMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
M+ATPIPRTLA+ +YGD+ ++ I +LPPGR PI T
Sbjct: 427 VMTATPIPRTLAMTVYGDLDVSVIDELPPGRKPITT 462
>gi|374582929|ref|ZP_09656023.1| ATP-dependent DNA helicase RecG [Desulfosporosinus youngiae DSM
17734]
gi|374419011|gb|EHQ91446.1| ATP-dependent DNA helicase RecG [Desulfosporosinus youngiae DSM
17734]
Length = 818
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 164/532 (30%), Positives = 248/532 (46%), Gaps = 103/532 (19%)
Query: 209 KCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEII 267
+ + + G+ QLE G +T++ LL ++PR Y D + I +L DG+ G+++
Sbjct: 148 RPLQYLKGVGPERAKQLEQLGIHTIQDLLQYYPRRYEDRRKRMIAELKDGELATIEGKVV 207
Query: 268 SSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLK---KFFRGTRF 324
+ ++ SG+ K I L ++ + + T F
Sbjct: 208 AG--------------------------------HVTSGKMKVIKLSIEQAGRLIQATWF 235
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLR----AKG 380
LK ++ VG V ++GKVR + D+ K +L +
Sbjct: 236 NQTFVLK----QYPVGTQVVITGKVRWQQQIPEI----LATDIEKASTNLPANDCEFSSQ 287
Query: 381 RPYPIYPSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPK 439
PIY L+ ++R+ I + + F + P E+ + G + A+ IH P+
Sbjct: 288 TILPIYSETARLSTKVIRNLIQGIIGQVEGEFPEILPPEVLR--GWMDRPSAHREIHFPR 345
Query: 440 HIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSS 499
+ LAR RL+++E +LQL + GL ++G++ RL + + G
Sbjct: 346 NYANLRLARDRLVWEEVLFLQLA-----VAGL-----RQGMV------RLGSPSLLGGEE 389
Query: 500 LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
L + R LP+ LT +Q I EI D+ +P M RL+QGDVG GKT VA A + +GS
Sbjct: 390 LIQSFYRGLPFQLTKAQQRVIQEIFQDMAKPQGMARLVQGDVGSGKTAVAMAALLRAVGS 449
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKD----L 615
GYQ A M PTE+LA QHY+ L K+ + + L GS QS+ +R+ +
Sbjct: 450 GYQGAMMAPTEILALQHYQSLEKVFTPL-----GITVVCLLGS----QSKGLRESALAMI 500
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
G +V+GTH+LI E V F AL LA+ DEQ RFGV QR M+
Sbjct: 501 AEGQAQVVVGTHALIQEGVVFKALGLAVTDEQHRFGVRQR----------------TMLQ 544
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
G PHVL ++ATPIPRTLAL LYGD+ L+ + ++P GR PI T
Sbjct: 545 GKGK-------NPHVLVLTATPIPRTLALTLYGDLQLSVLDEMPAGRKPIIT 589
>gi|284032693|ref|YP_003382624.1| ATP-dependent DNA helicase RecG [Kribbella flavida DSM 17836]
gi|283811986|gb|ADB33825.1| ATP-dependent DNA helicase RecG [Kribbella flavida DSM 17836]
Length = 747
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 167/545 (30%), Positives = 254/545 (46%), Gaps = 114/545 (20%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIV 285
E G T+ +LL H+PR Y +K G F E+
Sbjct: 23 EVLGIETVGQLLRHYPRRY---------------------------LKKGELTPFDEL-- 53
Query: 286 GCEIADTETTSGD----EVVNIDSGQKKKIYLHLKKFFRGTRFTSI-------------- 327
E+ D T SG V ++DS Q+ ++ + K+ R T +
Sbjct: 54 --EVGDQATVSGRVKKVTVRSLDSKQEIRLE-EVNKYRRHRTITKVVVTDGRNDLELAFF 110
Query: 328 --PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLS---LRAKGRP 382
P+L + K G G+V R + +++ ++L DE+DLS + + +P
Sbjct: 111 NQPWLAN---KLTPGTAALFWGEVTTFR--DIRQLKGPGTEIL-DEEDLSEAEIERRAKP 164
Query: 383 Y-PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
+ P+YP+ L + + +I L L DP+P+ + LL L +A IH P+
Sbjct: 165 FRPLYPATAKLPTATIERSIKIVLDNLEDVEDPIPELVLANEKLLGLREALQKIHLPETE 224
Query: 442 DEADLARKRLIFDEFFYLQ--LGRLYQMLEGLGTQFEKE---GLLDKYRKPRLNAAYMEG 496
+ D A++R F+E +Q L + + + L K GLLD +
Sbjct: 225 KDWDTAQQRFRFEEALVMQTILAQRRAVADALKAVPRKRTPGGLLDDFDA---------- 274
Query: 497 WSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEV 556
LP+ LT Q EI DL +P PM+RLLQG+VG GKTVVA A + V
Sbjct: 275 ----------RLPFQLTEGQAEVCDEIFADLARPHPMHRLLQGEVGSGKTVVALRAMLSV 324
Query: 557 IGSGYQAAFMVPTELLATQHYEHLLKLLDNMEE------DKHKPKIALLTGSTPVKQSRM 610
+ +G QA + PTE+LATQH++ L K+L + E ++ LLTGS R
Sbjct: 325 VDAGGQAVLLAPTEVLATQHHKTLTKMLGELAEAGMLGGADRATRVGLLTGSLNAASRRT 384
Query: 611 IRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSG 670
D +G +V+GTH+L+ +KV+F+ L L +VDEQ RFGV QR ++K SG
Sbjct: 385 AMLDAASGAAGIVVGTHALLEDKVQFADLGLVVVDEQHRFGVEQRAALSTK-------SG 437
Query: 671 MAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
PHVL M+ATPIPRT+A+ ++GD++++ +T+LP GR PIK+ ++
Sbjct: 438 --------------ENTPHVLVMTATPIPRTVAMTVFGDLAVSTLTELPAGRSPIKSSVV 483
Query: 731 EGNEK 735
EK
Sbjct: 484 PAKEK 488
>gi|417980362|ref|ZP_12621042.1| ATP-dependent DNA helicase [Lactobacillus casei 12A]
gi|417983633|ref|ZP_12624269.1| ATP-dependent DNA helicase [Lactobacillus casei 21/1]
gi|410524685|gb|EKP99592.1| ATP-dependent DNA helicase [Lactobacillus casei 12A]
gi|410527902|gb|EKQ02764.1| ATP-dependent DNA helicase [Lactobacillus casei 21/1]
Length = 679
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 166/541 (30%), Positives = 247/541 (45%), Gaps = 101/541 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
++ +PG+ + L + G +T+R LL +FP Y DL+ +
Sbjct: 7 VTVLPGVGPKREAGLASLGIHTIRDLLFYFPYRYDDLKVKDL------------------ 48
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNID--------SGQKKKIYLHLKKFFRGT 322
E AD E + +V D + + L +++
Sbjct: 49 ----------------AEAADQEKLTVKGIVVTDPVISRFGPHRSRVNVKLQIERSVILV 92
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+LK + ++G+ + GK A R + + I + +D S+ A
Sbjct: 93 TFFNQPWLKD---RFQMGDEAAIFGKWDAKRRS----LTGMKILATQSQDQPSMAA---- 141
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
IY + L D I A + N D VP I + + L+ G+H P
Sbjct: 142 --IYTVNKNVRMGTLLDLIKAAWERDRQNINDLVPASIREHYRLMSDAQLVHGMHFPDTP 199
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
EA AR+ +F EFF QL Q L+ L GL Y L A
Sbjct: 200 AEAKAARRTGVFREFFLFQLQ--IQALKQLNAN-SSNGLAIPYDNQALRA---------- 246
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
L+ LP++LT++Q ++EI D+++P MNRLLQGDVG GKT+VA + + +G+
Sbjct: 247 --LIATLPFALTNAQKRVVNEICADMRRPNHMNRLLQGDVGSGKTIVAAIVLYAAVTAGF 304
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
QAA MVPTE+LA QH+ L KL + K+ LLTGST K+ R + +L+ G +
Sbjct: 305 QAALMVPTEVLAEQHFAKLTKLFKDF-----PVKLGLLTGSTSTKKRRELLSELRDGRLN 359
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
L+IGTH+LI + V+F AL L ++DEQ RFGV QR K
Sbjct: 360 LIIGTHALIQKGVDFHALGLVVIDEQHRFGVNQRKILQEK-------------------- 399
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVY 741
P +L+M+ATPIPRTLA+ YG+M ++ I +LP GR PI T + N+ + VY
Sbjct: 400 ---GQKPDLLSMTATPIPRTLAITAYGEMDVSTIDELPAGRKPIATTWLRKNQ--IDQVY 454
Query: 742 K 742
+
Sbjct: 455 R 455
>gi|384253013|gb|EIE26488.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 1115
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 172/534 (32%), Positives = 249/534 (46%), Gaps = 119/534 (22%)
Query: 221 LYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSF 280
Y LE GF +L LL+ FPR+Y + L D Y G ++ S
Sbjct: 448 FYRDLEKSGFESLGDLLYFFPRSYINFGTV---LRDDAYVHLDGTVMQSSA--------- 495
Query: 281 LEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVG 340
KFF+ F+ + S+E
Sbjct: 496 ------------------------------------KFFKNLFFSDL--TASVE----AA 513
Query: 341 EFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDT 400
+ ++G+ +E+ ++ L+ + A+G P+Y + L +
Sbjct: 514 AVLPITGR---------WELDASTVEFLEPTAKKAAAAEGL-VPVYSQRAPLKKGDMPKL 563
Query: 401 IARALQALPA-----NFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDE 455
+++AL L + D +P+ + +E L+ A HQP+ EA+ AR+RL F+E
Sbjct: 564 VSKALTILETAGAVNDMDILPEPVREEHSLMPWLQAMRSRHQPQSEQEAEAARQRLAFEE 623
Query: 456 FFYLQLGRLYQ----MLEGLGTQ---FEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRAL 508
LQL L Q LGT+ + GL++ R+ AL
Sbjct: 624 LLVLQLRLLLQRNDIQASALGTEGVCVTEVGLVEAARE--------------------AL 663
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
P+ LT Q A+ ++ D++ P+PM LLQGDVGCGKT VAFLA + GSGYQAA M+P
Sbjct: 664 PFQLTGGQERALDNVLRDMQGPLPMMCLLQGDVGCGKTAVAFLALLAAAGSGYQAAIMLP 723
Query: 569 TELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHS 628
TE+LA+Q + L +LL +M E +PK+ LTGST K+ R I L G + L++GTH+
Sbjct: 724 TEILASQTHIKLQQLLQSMPEGL-QPKLEFLTGSTKAKERREIIGGLADGSVDLIVGTHA 782
Query: 629 LIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAP 688
LI++ VEF L A+VDEQ RFGV QR R +K SP AP
Sbjct: 783 LISDSVEFQNLGFAVVDEQHRFGVEQRARLAAK----------------ASP------AP 820
Query: 689 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYK 742
HV+ M+ATPIPRTLAL +GD++L I +LPPGR P+ T + + VY+
Sbjct: 821 HVMYMTATPIPRTLALVEHGDLALVTINELPPGRSPVATRALTDSPASRALVYE 874
>gi|429750834|ref|ZP_19283836.1| ATP-dependent DNA helicase RecG [Capnocytophaga sp. oral taxon 332
str. F0381]
gi|429163750|gb|EKY05944.1| ATP-dependent DNA helicase RecG [Capnocytophaga sp. oral taxon 332
str. F0381]
Length = 704
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 128/354 (36%), Positives = 192/354 (54%), Gaps = 55/354 (15%)
Query: 384 PIYPS-----KGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQ 437
P+YPS K ++ ++R I + + F + +P+ + L+ +A + IH
Sbjct: 154 PVYPSTEKLAKRNISNRVMRQLIHTLFEEVGTTFAENLPENLLNALNLIGKQEAMLNIHF 213
Query: 438 PKHIDEADLARKRLIFDEFFYLQL----GRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAY 493
P A RL F+E FY+Q+ L Q + G F+K G +
Sbjct: 214 PTTQAMLTKATVRLKFEELFYIQIQLVRKNLLQKQKFQGMPFKKVG-----------EVF 262
Query: 494 MEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLAC 553
M ++ LP+ LT++Q + EI DL MNRLLQGDVG GKT+VA +
Sbjct: 263 MNFYN-------HHLPFPLTNAQKRVLKEIRADLGSNTQMNRLLQGDVGSGKTIVALMTM 315
Query: 554 MEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRK 613
+ + +G+QA M PTE+LATQHY+ + LL + ++ALLTGS+ K+ R++ +
Sbjct: 316 LLAVDNGFQACLMAPTEILATQHYQSIASLLKDT-----GVEVALLTGSSKTKERRLLDE 370
Query: 614 DLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAM 673
LQ G+++++IGTH+L+ +KV+F L LAI+DEQ RFGV QR + K
Sbjct: 371 QLQAGNLSILIGTHALLEDKVQFHNLGLAIIDEQHRFGVEQRAKLWRK------------ 418
Query: 674 VNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
H+ PH+L M+ATPIPRTLA+++YGD+ ++ I +LPPGR PIKT
Sbjct: 419 ----------NHIPPHILVMTATPIPRTLAMSVYGDLDVSVIDELPPGRKPIKT 462
>gi|291454386|ref|ZP_06593776.1| ATP-dependent DNA helicase [Streptomyces albus J1074]
gi|291357335|gb|EFE84237.1| ATP-dependent DNA helicase [Streptomyces albus J1074]
Length = 734
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 167/550 (30%), Positives = 259/550 (47%), Gaps = 88/550 (16%)
Query: 205 PLLDKCISCV--PGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN----AQIDLDDGQ 258
P LD+ + V P +K + L+ +T+ LLHH+PR YA+ A + LD+
Sbjct: 5 PALDENLKKVVGPPTAKVMADHLD---LHTVGDLLHHYPRRYAERGELTTLADLPLDE-- 59
Query: 259 YFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKF 318
V V +++D V ++G+ K++ + +
Sbjct: 60 -----------------------HVTVVAQVSDAR------VHTFNAGRGKRLEVTITDG 90
Query: 319 FRGTRFTSIPFLKSIEGKHK---VGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDE--DD 373
R + F + + H+ G +GKV N+ ++ +L+ + +D
Sbjct: 91 SGSLRL--VFFGRGVHKPHQDLQPGTRAMFAGKVSVF--NHRLQLAHPAYQLLRGDGAED 146
Query: 374 LSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYM 433
+S A G P+YP+ L + + + L + DP+P + + GLL L +A
Sbjct: 147 VSSWA-GALIPLYPATAKLESWKIAKAVDAVLPSADEALDPLPGALREGRGLLPLPEALR 205
Query: 434 GIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAY 493
IH+P+ + AR RL +DE F LQ+ L + EG L PR A
Sbjct: 206 KIHRPQSQADVAQARARLKWDEAFVLQVA--------LARRRHAEGQLSAV--PRRPAP- 254
Query: 494 MEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLAC 553
L LP++LT Q EI DL PM+RLLQG+VG GKT+VA A
Sbjct: 255 ----DGLLTAFDARLPFTLTEGQQKVSREIFDDLATDHPMHRLLQGEVGSGKTMVALRAM 310
Query: 554 MEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEED------KHKPKIALLTGSTPVKQ 607
+ V+ SG QAA + PTE+LA QH+ + +++D++ + +H K+ LLTGS
Sbjct: 311 LAVVDSGGQAAMLAPTEVLAQQHHRSITEMMDDLADGSTLGAPEHATKVVLLTGSMTAAA 370
Query: 608 SRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSM 667
R DL TG+ +VIGTH+LI + V+F L L +VDEQ RFGV QR +K
Sbjct: 371 RRKALLDLATGEAGIVIGTHALIEDTVQFHELGLVVVDEQHRFGVEQRDALRAK------ 424
Query: 668 SSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
G K++ PH+L M+ATPIPRT+A+ ++GD+ + + LP GR PI T
Sbjct: 425 ----------GHTKEEAR-TPHLLVMTATPIPRTVAMTVFGDLETSVLDQLPAGRSPIST 473
Query: 728 YIIEGNEKGY 737
+++ +K +
Sbjct: 474 HVVPAQDKPH 483
>gi|452974509|gb|EME74329.1| ATP-dependent DNA helicase RecG [Bacillus sonorensis L12]
Length = 682
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 164/548 (29%), Positives = 255/548 (46%), Gaps = 123/548 (22%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L IS + G+ L G Y + LL++FP Y D
Sbjct: 5 LQNSISVIKGIGTETEKTLNELGIYDISDLLNYFPYRYDD-------------------- 44
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSG----------QKKKIYLHLK 316
E+ D E + +E V ++ KK+ L +
Sbjct: 45 --------------------YELRDLEEVAHEERVTVEGKVHSEPSLTYYGKKRSRLTFR 84
Query: 317 KFFRGTRFTSI----PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKD-- 370
T++ P+LK K +G V VSGK R + + LK+
Sbjct: 85 LLVGNYLITAVCFNRPYLKK---KLAIGSVVTVSGKWDKHRQS-------VMVQELKNGP 134
Query: 371 -EDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQA-LPANFDPVPKEITQEFGLLCL 428
++D ++ P+Y K + +R I A++ L DP+P+++ + L
Sbjct: 135 HKEDQTIE------PVYSVKENITVKTMRKLIQEAVRTHLQHAEDPLPEKLRLAYKLPSY 188
Query: 429 FDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKE---GLLDKYR 485
DA IH+P+ + AR+R +++EF QL ++ L +FE+E G+ ++
Sbjct: 189 QDAVKAIHKPETREALKQARRRFVYEEFLLFQLK-----MQAL-RKFEREQSDGIRHTFK 242
Query: 486 KPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGK 545
+ ++A + +LP++LT++Q A+SEI+ D+ MNRLLQGDVG GK
Sbjct: 243 REDVDA------------FVNSLPFTLTNAQAKALSEILKDMASDYKMNRLLQGDVGSGK 290
Query: 546 TVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPV 605
T VA +A I SG+Q A MVPTE+LA QH + L+ L +N++ + +ALLT S
Sbjct: 291 TAVAAIALYASILSGFQGALMVPTEILAEQHADSLVSLFENLDVN-----VALLTSSVKG 345
Query: 606 KQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYT 665
K+ R + LQ G+I +++GTH+LI + V F L L I DEQ RFGV QR + SK
Sbjct: 346 KRRRELLARLQEGEIDILVGTHALIQDDVHFKQLGLVITDEQHRFGVEQRKKLRSK---- 401
Query: 666 SMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
KD P VL M+ATPIPRTLA+ ++G+M ++ I ++P GR I
Sbjct: 402 --------------GKD-----PDVLFMTATPIPRTLAITVFGEMDVSIIDEMPAGRKRI 442
Query: 726 KTYIIEGN 733
+TY ++ +
Sbjct: 443 ETYWVKHD 450
>gi|433448708|ref|ZP_20411574.1| ATP-dependent DNA helicase RecG [Weissella ceti NC36]
gi|429539635|gb|ELA07671.1| ATP-dependent DNA helicase RecG [Weissella ceti NC36]
Length = 677
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 165/537 (30%), Positives = 255/537 (47%), Gaps = 114/537 (21%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADL-QNAQIDLDDGQYFIFIG 264
L+D ++ + G+ + L YT+ LL ++P+ Y DL + + +G+ F G
Sbjct: 3 LMD-SVAVLSGVGPKREQALNELDIYTIADLLSYYPKRYTDLSEKTPAETQNGEKITFKG 61
Query: 265 EIIS----SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFR 320
+ S SR +A +F T S D +
Sbjct: 62 VVTSDPVISRFGRAKARVTF-----------RLTVSPDTI-------------------- 90
Query: 321 GTRFTSIPFL-KSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAK 379
F + P++ K IE +G+ + V G R + I ++K+ED+ SL+
Sbjct: 91 SVSFFNQPWIAKQIE----IGQEIAVYGTYDQPRQSLS------GIKLMKNEDEDSLQG- 139
Query: 380 GRPYPIYPSKGGLNASLLRDTIARAL----QALPANFDPVPKEITQEFGLLCLFDAYMGI 435
+YPS + A +++ + +AL + + F VP+ I +++ L+ + +
Sbjct: 140 -----VYPSSKQIKAGTIKELVQQALGRYDRLIRQEF--VPQHIREQYKLMPHYTMIHTM 192
Query: 436 HQPKHIDEADLARKRLIFDEFFYLQL-----GRLYQMLEGLGTQFEKEGLLDKYRKPRLN 490
H+P+ + A++ F+EFF Q+ ++ Q +G F+ E L
Sbjct: 193 HEPQDAYTLEKAQRTASFEEFFIFQMRLQLIKQMNQSNQGRAVLFDNETL---------- 242
Query: 491 AAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAF 550
K ++ LP+ LT +Q ++EI+ D+++P+ MNRLLQGDVG GKTVVA
Sbjct: 243 -----------KAFIQTLPFELTDAQKKVVNEILRDMRRPLHMNRLLQGDVGSGKTVVAA 291
Query: 551 LACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRM 610
LA I + QAA M PTE+LA QH + + K D ++ ++ LLTGST R
Sbjct: 292 LAMYGAITANMQAAMMAPTEILAQQHAKTVGKFF-----DPNEVRVELLTGSTKAAARRQ 346
Query: 611 IRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSG 670
I +DL+ G+I ++IGTH+LI V F L LAI+DEQ RFGV QR
Sbjct: 347 ILEDLENGEIDILIGTHALIQPDVAFHNLGLAIIDEQHRFGVKQR--------------- 391
Query: 671 MAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
A + G M P VLAM+ATPIPRTLA+ YG+M ++ I LP GR PI+T
Sbjct: 392 -AALREIG-------MNPDVLAMTATPIPRTLAITAYGEMDVSVIDQLPAGRKPIET 440
>gi|385813577|ref|YP_005849970.1| DNA helicase RecG [Lactobacillus helveticus H10]
gi|323466296|gb|ADX69983.1| DNA helicase RecG [Lactobacillus helveticus H10]
Length = 679
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 170/526 (32%), Positives = 252/526 (47%), Gaps = 89/526 (16%)
Query: 203 IEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFI 261
IE L ++ + G+ + L + G Y++ LL +FP Y +LQ +D + DGQ +
Sbjct: 5 IENALFAPVTDLKGVGTKTAADLGSLGIYSIYDLLFYFPFRYDELQTLPLDQIMDGQKVV 64
Query: 262 FIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRG 321
G I+++ + + + I +V+ ++
Sbjct: 65 LKG-IVATEPFVSRFGYKKSRLSFKMRI-------DHDVIMVN----------------- 99
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
F + P+LKS K ++GE V + GK R + + + K+ D
Sbjct: 100 --FFNQPWLKS---KIEIGEEVAIYGKYNVARQS----LSAFKFIAAKEND-------SG 143
Query: 382 PYPIYPSKGGLNASLLRDTIARALQA-LPANFDPVPKEITQEFGLLCLFDAYMGIHQPKH 440
PIYP + L I A L D VP+ I +++ LL + +H PK+
Sbjct: 144 MAPIYPVNRHVKQKKLVSLINLATDGFLDQVRDIVPENIREKYRLLTDQEIIQKMHHPKN 203
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWS-S 499
EA+LA++ IF EFF +L +L + G Q A Y + +
Sbjct: 204 STEANLAKRSAIFREFFIFEL-QLALLANHDGKQ----------------AGYPKNYDLK 246
Query: 500 LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
+L +LP+ L+ Q ++EI D+ M RLLQGDVG GKTVVA A I +
Sbjct: 247 EIAQLTSSLPFELSDDQKEVVNEIFADMHSSGQMRRLLQGDVGSGKTVVAVYAIFAAITA 306
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
GYQ A MVPTE+LATQH++ + +LL + ++ALLTG+T + R I ++L G
Sbjct: 307 GYQVALMVPTEILATQHFKKIDELLRPL-----GVRVALLTGNTKTLERREIYRELTDGT 361
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
I ++IGTH+LI E V F L L I+DEQ RFGV QR A++N
Sbjct: 362 INVMIGTHALIQENVIFKKLGLVIIDEQHRFGVGQR---------------QALIN---- 402
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
K DQ P +LAM+ATPIPRTLAL +YGDM++++I +P GR PI
Sbjct: 403 -KGDQ---PDILAMTATPIPRTLALTVYGDMTVSEIHHMPAGRKPI 444
>gi|310659145|ref|YP_003936866.1| RecG [[Clostridium] sticklandii]
gi|308825923|emb|CBH21961.1| RecG [[Clostridium] sticklandii]
Length = 685
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 173/528 (32%), Positives = 250/528 (47%), Gaps = 87/528 (16%)
Query: 207 LDKCISCVPGL---SKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFI 261
LD I +PG+ K +Y++ G T++ LL H+P Y D ++ + D+ +
Sbjct: 5 LDLEIDIIPGIGPKKKTVYYKR---GIKTIKDLLMHYPMRYEDRRHFKKIADVHFEEKVC 61
Query: 262 FIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRG 321
G+IIS K + L + C IY + +K F
Sbjct: 62 IEGKIISVDVKKPKKNMVILRI---C-----------------------IYDNTQKAFL- 94
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
T F + P+++S + +G + G A R N + ID D+ S + G
Sbjct: 95 TVFNN-PYIQS---QLTIGRTIKAYGT--AKRINGICNISAPEIDF----DNYS-KKTGI 143
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALP-ANFDPVPKEITQEFGLLCLFDAYMGIHQPKH 440
YP+YP GL + +I LQ+L + + + Q+ L L DA IH PK
Sbjct: 144 IYPVYPLTRGLFNDEIIKSIKWILQSLNIKELEYLNSKYRQQLRLCELDDAIKNIHFPKD 203
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+A+ RL+FDEFF L +G L + K GL+ ++P + E S
Sbjct: 204 PLLIKVAKFRLVFDEFFLLNIG-----LSSI-----KHGLV---KEPGIKHESSEETKSK 250
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
+ + LP+ LT +Q + EII D+ PM RL+QGDVG GKTV+A +A +G
Sbjct: 251 IEAFVEELPFELTKAQSKVMQEIIDDMASDKPMQRLVQGDVGSGKTVIAMIAAYYAYING 310
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQ A M PTE+LA QHY + L + N + I LLTGST K R + ++L G
Sbjct: 311 YQCALMAPTEILAKQHYNNFLDIFKNTNAE-----IRLLTGSTTAKSKRTVYEELLNGSC 365
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+LI +KV+F+ L L I DEQ RFGV QR + K
Sbjct: 366 DIVIGTHALIEDKVKFNNLSLVITDEQHRFGVRQRSKLLLK------------------- 406
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTY 728
H+ +L M+ATPIPRTLA L+GD+ ++ I +P GR PIKT+
Sbjct: 407 ---NHLTVDMLVMTATPIPRTLAFILHGDLDISVIDQMPSGRKPIKTF 451
>gi|402312020|ref|ZP_10830950.1| ATP-dependent DNA helicase RecG [Lachnospiraceae bacterium ICM7]
gi|400370681|gb|EJP23663.1| ATP-dependent DNA helicase RecG [Lachnospiraceae bacterium ICM7]
Length = 683
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 172/546 (31%), Positives = 266/546 (48%), Gaps = 96/546 (17%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTY----ADLQNAQIDLDDGQYFI 261
++D + + G+ + LE T++ LL H+P Y A + ++++ D+
Sbjct: 1 MIDISVKNIKGVGAKTAEYLEKLDIKTVKDLLKHYPIRYLEYKAPTKISEVNKDE----- 55
Query: 262 FIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRG 321
E++ +KA + S +IA T+ T +V+++
Sbjct: 56 ---EVV----IKATITKSISLTGPNRKIAVTKVTDFIDVLDV------------------ 90
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMRE-YNIDVLKDEDDLSLRAKG 380
+ + P+L++ K GE GK + RS N E Y ID K + G
Sbjct: 91 -IWYNSPYLRAT---LKQGESYIFVGKF-SRRSKNTLEHPTIYTIDEYK-------KKIG 138
Query: 381 RPYPIYPSKGGLNASLLRDTIARALQALP-ANFDP-VPKEITQEFGLLCLFDAYMGIHQP 438
PIY G+N +L+ I A + + +F+ +P+ I +EF L A IH P
Sbjct: 139 SFKPIYALTAGINNNLMEKLIKSAFEYIDDKDFEEYLPESILKEFSLEDRNKAVRNIHDP 198
Query: 439 KHIDEADL--ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG 496
I ++ L ++KRL FD+FF G ++L+ + + ++ K K Y+E
Sbjct: 199 --ISKSSLFESKKRLAFDDFFRFLYG--MKLLKNKRLRVKSRNIVSKEIK------YLEE 248
Query: 497 WSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEV 556
S LP+ LT SQ + I EI+ D+ V NRL+QGDVG GKTVVA +
Sbjct: 249 IKS-------TLPFKLTDSQNNVIEEILNDMSSGVVTNRLIQGDVGSGKTVVALICLYMA 301
Query: 557 IGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQ 616
+ SG+Q MVPTE+LA QH++ + +L + K+ PKI +LTGS K+ + + ++
Sbjct: 302 VKSGFQGVVMVPTEVLAKQHFKSMSDILGKL---KNPPKIGILTGSMTKKEHLAVYEKIE 358
Query: 617 TGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNS 676
G+I +V+GTH+L+ E V+F L L + DEQ RFGV QR T++S
Sbjct: 359 AGEIDIVVGTHALLVEDVKFKNLGLVVTDEQHRFGVRQR---------TTLS-------- 401
Query: 677 DGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN--E 734
D+ HVL MSATPIPRTLA+ LYGD+ ++ I P GR+PIK +I N E
Sbjct: 402 ------DKGEDVHVLVMSATPIPRTLAIILYGDLDISTIETKPVGRLPIKNAVITENDRE 455
Query: 735 KGYENV 740
K Y ++
Sbjct: 456 KAYRHI 461
>gi|348025271|ref|YP_004765075.1| ATP-dependent DNA helicase RecG [Megasphaera elsdenii DSM 20460]
gi|341821324|emb|CCC72248.1| ATP-dependent DNA helicase RecG [Megasphaera elsdenii DSM 20460]
Length = 679
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 160/507 (31%), Positives = 237/507 (46%), Gaps = 93/507 (18%)
Query: 232 TLRKLLHHFPRTYADLQN----AQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGC 287
T+ LL +FPR Y D + Q G+ + G + S + M+ S L+V V
Sbjct: 26 TVSDLLQYFPRDYEDRSHIWPIGQAPCGTGKSLVLCGTVASVQEMRPRRGLSLLKVRV-- 83
Query: 288 EIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSG 347
++ T E+V + KK+ + +VG + G
Sbjct: 84 ----SDGTGAVELVWFNQAFKKR-------------------------QLRVGMTLTAFG 114
Query: 348 KVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY-PIYPSKGGLNASLLRDTIARALQ 406
K+ Y R+ N D RA+G + P+Y GL +R + +AL
Sbjct: 115 KLEWA-----YGRRQMN-----GPDTEEGRAEGEGFVPLYGLTDGLRQQDIRKAVRQALD 164
Query: 407 ALPANFDPVPKE---ITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGR 463
+ D +P F + +AY IH P +++ + AR++L F+E F +QLG
Sbjct: 165 LAREHLDILPGWDGCRQSPFATMPTLEAYEQIHFPDSMEKREQARRQLAFEELFDMQLGL 224
Query: 464 LYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEI 523
L + + +++GL K N L K LP++LT Q A +I
Sbjct: 225 LLRRRH----EGKRQGL-----KCSPNG-------KLLKTFYEHLPFTLTKGQTQAFLDI 268
Query: 524 IWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKL 583
D++ VPM RL+QGDVG GKTVVA LA +++ +GYQ A M PT +LA QHY+ +L
Sbjct: 269 QADMESEVPMQRLVQGDVGSGKTVVAALALAKIVENGYQGALMAPTGILAAQHYDEFCRL 328
Query: 584 LDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAI 643
++ +IALLTG T K+ + + DL G I ++IGTH+LI + V F L L +
Sbjct: 329 FQGLD-----VRIALLTGRTTAKERKQLLADLADGRIDILIGTHALIQDDVAFRCLGLVV 383
Query: 644 VDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLA 703
DEQ RFGV QR S + + PH L M+ATPIPRTL
Sbjct: 384 TDEQHRFGVRQR-----------------------SALEQKGKEPHALFMTATPIPRTLT 420
Query: 704 LALYGDMSLTQITDLPPGRIPIKTYII 730
L+LYGD+ ++ I ++PPGR +KTY +
Sbjct: 421 LSLYGDLDVSSIREMPPGRKRVKTYAV 447
>gi|225012820|ref|ZP_03703254.1| ATP-dependent DNA helicase RecG [Flavobacteria bacterium MS024-2A]
gi|225003094|gb|EEG41070.1| ATP-dependent DNA helicase RecG [Flavobacteria bacterium MS024-2A]
Length = 699
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 147/432 (34%), Positives = 227/432 (52%), Gaps = 71/432 (16%)
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREY-----------NIDVLKDED- 372
TSI +++ GK V F +G ++ + + +RE I+ K +
Sbjct: 68 TSIDYIQQKRGKRMVANFQDETGSMQLVWFRGYQWLRESIRINQQYVIFGRINWFKGQAS 127
Query: 373 ----DLSLRA------KGRPYPIYPS-----KGGLNASLLRDTIARALQALPANF-DPVP 416
+L L + K YPIYPS G++ +++ +A LQ A F + +P
Sbjct: 128 MPHPELELESVFQQGVKAAFYPIYPSSEKLINKGVSQRVIQKLVATLLQLKEAEFSETLP 187
Query: 417 KEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFE 476
+ + F + +A +H P + A+ RL F+EFFY+QL Q++
Sbjct: 188 QYLLNHFKFISKKEALHQVHYPSTQNLLSRAQMRLKFEEFFYMQL----QLI-------- 235
Query: 477 KEGLLDKYRKPRLNAAYMEGWSSLTKKLL-RALPYSLTSSQLSAISEIIWDLKQPVPMNR 535
L ++ RK ++ S+ K LP++LT +Q + EI DL MNR
Sbjct: 236 ---LKNRQRKQKIKGYVFPEVGSVFKDFFDNHLPFTLTEAQKRVVKEIRNDLGTGRQMNR 292
Query: 536 LLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPK 595
LLQGDVG GKT+VA LA + I +G+Q+ + PTE+LA QHY+ L LL+ +
Sbjct: 293 LLQGDVGSGKTIVALLAMLIAIDNGFQSTLVAPTEILAQQHYQSLDALLEGT-----GVQ 347
Query: 596 IALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQR 655
ALLTGS+ K+ ++ + L++G++++++GTH++ EKV+F L +AI+DEQ RFGV QR
Sbjct: 348 CALLTGSSTKKERVVLHEALESGELSILVGTHAVFEEKVQFQNLGIAIIDEQHRFGVAQR 407
Query: 656 GRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQI 715
+KL+ K+D + PHVL M+ATPIPRTLA+++YGD+ ++ I
Sbjct: 408 ----AKLW----------------QKND--IPPHVLVMTATPIPRTLAMSIYGDLDISII 445
Query: 716 TDLPPGRIPIKT 727
LPPGR PIKT
Sbjct: 446 DTLPPGRKPIKT 457
>gi|418002290|ref|ZP_12642411.1| ATP-dependent DNA helicase [Lactobacillus casei UCD174]
gi|410544452|gb|EKQ18778.1| ATP-dependent DNA helicase [Lactobacillus casei UCD174]
Length = 679
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 166/541 (30%), Positives = 247/541 (45%), Gaps = 101/541 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
++ +PG+ + L + G +T+R LL +FP Y DL+ +
Sbjct: 7 VTVLPGVGPKREAGLASLGIHTIRDLLFYFPYRYDDLKVKDL------------------ 48
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNID--------SGQKKKIYLHLKKFFRGT 322
E AD E + +V D + + L +++
Sbjct: 49 ----------------AEAADQEKLTVKGIVVTDPVISRFGPHRSRVNVKLQIERSVILV 92
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+LK + ++G+ + GK A R + + I + +D S+ A
Sbjct: 93 TFFNQPWLKD---RFQMGDEAAIFGKWDAKRRS----LTGMKILATQSQDQPSMAA---- 141
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
IY + L D I A + N D VP I + + L+ G+H P
Sbjct: 142 --IYTVNKNVRMGTLLDLIKAAWERDQQNINDLVPASIREHYRLMSDAQLVHGMHFPDTP 199
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
EA AR+ +F EFF QL Q L+ L GL Y L A
Sbjct: 200 AEAKAARRTGVFREFFLFQLQ--IQALKQLNAN-SSNGLAIPYDNQALRA---------- 246
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
L+ LP++LT++Q ++EI D+++P MNRLLQGDVG GKT+VA + + +G+
Sbjct: 247 --LIATLPFALTNAQKRVVNEICADMRRPNHMNRLLQGDVGSGKTIVAAIVQYAAVTAGF 304
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
QAA MVPTE+LA QH+ L KL + K+ LLTGST K+ R + +L+ G +
Sbjct: 305 QAALMVPTEVLAEQHFAKLTKLFKDF-----PVKLGLLTGSTSTKKRRELLSELRDGRLN 359
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
L+IGTH+LI + V+F AL L ++DEQ RFGV QR K
Sbjct: 360 LIIGTHALIQKGVDFHALGLVVIDEQHRFGVNQRKILQEK-------------------- 399
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVY 741
P +L+M+ATPIPRTLA+ YG+M ++ I +LP GR PI T + N+ + VY
Sbjct: 400 ---GQKPDLLSMTATPIPRTLAITAYGEMDVSTIDELPAGRKPIATTWLRKNQ--IDQVY 454
Query: 742 K 742
+
Sbjct: 455 R 455
>gi|126664109|ref|ZP_01735102.1| ATP-dependent DNA helicase [Flavobacteria bacterium BAL38]
gi|126623823|gb|EAZ94518.1| ATP-dependent DNA helicase [Flavobacteria bacterium BAL38]
Length = 706
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 170/519 (32%), Positives = 253/519 (48%), Gaps = 101/519 (19%)
Query: 228 CGFYTLRKLLHHFPRTYAD---------LQNAQIDLDDGQYFIFIGEIISSRGMKAGCSF 278
G + LL+ FP Y D LQN+ ++ +G+II+ + ++ G
Sbjct: 28 LGIHKYADLLNLFPNRYIDRTRYYKINELQNSNSEVQ------IVGKIINIKTVEQGKGR 81
Query: 279 SFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHK 338
S L V I DT GQ + ++ +K+ R + ++P+
Sbjct: 82 SRL---VATFIDDT-------------GQMELVWFQGQKWIRESIKINVPY--------- 116
Query: 339 VGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGL-NASLL 397
+ GKV + Y M +++L +E SLR+ +P +YPS L N +
Sbjct: 117 -----VIFGKVTQFGAT--YNMAHPEMELL-EEHKTSLRSAMQP--VYPSTEKLANKGIS 166
Query: 398 RDTIARALQALPANF-----DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLI 452
I + +Q L + +P + E L+ A IH PK D A+ RL
Sbjct: 167 NKVINKMMQQLFVETQVLFSENLPNYLLDELKLIPKNAALFNIHFPKSQDLLAKAQFRLK 226
Query: 453 FDEFFYLQLGRLYQML----EGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRAL 508
F+E F++QL + + L + G FEK G E +++ K L
Sbjct: 227 FEELFFIQLQLITKNLIRKHKIKGMPFEKVG---------------ENFNNFYKN---HL 268
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
P+ LT++Q + EI DL MNRLLQGDVG GKT+VA + + +G+Q+ M P
Sbjct: 269 PFDLTNAQKRVLKEIRNDLGSNAQMNRLLQGDVGSGKTIVALMCMLLAKDNGFQSCLMAP 328
Query: 569 TELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHS 628
TE+LA QH+ L +LL N E I +LTGST + ++I + L+ G + ++IGTH+
Sbjct: 329 TEILANQHFNGLSELL-NPETSGLNISIKILTGSTKTAERKIIHEALENGTLDIIIGTHA 387
Query: 629 LIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAP 688
L+ +KV+F L LAI+DEQ RFGV QR SKL+ G A + P
Sbjct: 388 LLEDKVQFQNLGLAIIDEQHRFGVEQR----SKLW------GKASI------------PP 425
Query: 689 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
HVL M+ATPIPRTLA++LYGD+ ++ I +LPPGR PI+T
Sbjct: 426 HVLVMTATPIPRTLAMSLYGDLDISVIDELPPGRKPIQT 464
>gi|347531736|ref|YP_004838499.1| ATP-dependent DNA helicase RecG [Roseburia hominis A2-183]
gi|345501884|gb|AEN96567.1| ATP-dependent DNA helicase RecG [Roseburia hominis A2-183]
Length = 685
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 164/536 (30%), Positives = 244/536 (45%), Gaps = 100/536 (18%)
Query: 214 VPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFIGEIISSRG 271
+ G+ ++ + T+ LL H+PRTY A+ ++ DG+ +G + +
Sbjct: 10 IKGIGEKTAALFQKLNIETVGDLLLHYPRTYVQFPVAKEVAEVTDGETAAVLGRVRKTPV 69
Query: 272 MKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLK 331
++ S +G + A+ E +FR +P++K
Sbjct: 70 VRRTRSMPVTVTTIGTDEAELELV----------------------WFR------MPYIK 101
Query: 332 SIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY-------- 383
S + G GKV R + M + I G Y
Sbjct: 102 S---QLAPGNTYVFYGKV--ARKGSRLVMEQAAI------------YSGEAYAAMEQAFL 144
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
P+Y GG++ +L+ T+ L + +P+EI + + A IH P+++D
Sbjct: 145 PVYGLTGGISNNLVTKTVRSVLGREELFKEYLPREIRSRYKICEYNYAIKEIHFPENMDT 204
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
AR RL+FDEFF L L Q+ KE + + + S T +
Sbjct: 205 LIAARNRLVFDEFF----------LFILNMQYHKEKRIKEANEFEFRE------DSFTDE 248
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
L+ LPY LT +Q A+SE+ D++ P M RL+QGDVG GKT++AFLA + + YQ+
Sbjct: 249 LIARLPYELTGAQKRALSEVKRDMRSPYVMQRLIQGDVGSGKTIIAFLAMADAAHNDYQS 308
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A M PTE+LA QHYE KL EE K + LLTGS +Q RM + LQ +V
Sbjct: 309 AIMAPTEVLARQHYETFQKLC---EEFGLKIPVVLLTGSMTARQKRMAYEALQLYPNAMV 365
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GTH+LI E+ + L L I DEQ RFGV QR F K
Sbjct: 366 VGTHALIQERAIYDNLALVITDEQHRFGVRQREIFAEK---------------------G 404
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYEN 739
+H PH+L MSATPIPRTLA+ LYGD+ ++ + ++P R+P+K ++ GY N
Sbjct: 405 RH--PHILVMSATPIPRTLAIILYGDLDISVVDEVPAKRLPVKNCVV---NTGYRN 455
>gi|298373533|ref|ZP_06983522.1| ATP-dependent DNA helicase RecG [Bacteroidetes oral taxon 274 str.
F0058]
gi|298274585|gb|EFI16137.1| ATP-dependent DNA helicase RecG [Bacteroidetes oral taxon 274 str.
F0058]
Length = 697
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 130/352 (36%), Positives = 195/352 (55%), Gaps = 44/352 (12%)
Query: 392 LNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKR 450
L++S LRD IA L + + + +P + + + L+ +A +H P++ D A +R
Sbjct: 161 LHSSALRDIIANLLNNVEVDVPETLPPYLIERYRLISRREAIYNMHIPRNQVLLDAATRR 220
Query: 451 LIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPY 510
L F+E FY+Q+ L Q + Q + EG + N Y LP+
Sbjct: 221 LKFEELFYIQMSILRQ---SVARQEKSEGFVMDRVGIHFNDFYKNN-----------LPF 266
Query: 511 SLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTE 570
+LT +Q I EI DLK MNRLLQGDVG GKT+VA L+ + I +G+QA M PTE
Sbjct: 267 TLTEAQKRVIKEIHADLKSGRQMNRLLQGDVGSGKTIVALLSSLIAIDNGFQACIMAPTE 326
Query: 571 LLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLI 630
+LATQHY + +L + + + LL GST K I + L++G++ ++IGTH+LI
Sbjct: 327 ILATQHYTGIARLTEGL-----GINVRLLIGSTKKKDRDQIHRMLESGELDIIIGTHALI 381
Query: 631 AEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHV 690
+KV+F L I+DEQ RFGV QR +KL+ ++ PH+
Sbjct: 382 EDKVKFRNLGFVIIDEQHRFGVAQR----AKLWAKNIQ------------------PPHI 419
Query: 691 LAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYK 742
L M+ATPIPRTLA+ +YG++ ++ I +LPPGR PIKTY N++ +++Y+
Sbjct: 420 LVMTATPIPRTLAMTVYGNLDISVIDELPPGRKPIKTYHYYDNKR--QDLYR 469
>gi|441206716|ref|ZP_20973249.1| ATP-dependent DNA helicase RecG [Mycobacterium smegmatis MKD8]
gi|440628414|gb|ELQ90213.1| ATP-dependent DNA helicase RecG [Mycobacterium smegmatis MKD8]
Length = 752
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 160/534 (29%), Positives = 253/534 (47%), Gaps = 84/534 (15%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNAQ-----IDLDDGQYFIFIGEIISSR--------GM 272
E+ G T+ LL H+PR Y+D + +DL++G++ FI I ++
Sbjct: 22 EHFGLRTVNDLLRHYPRKYSDGMTVRGEGEALDLEEGEHVTFIDVITEAQPGTMKRPVKT 81
Query: 273 KAGCSFS--FLEVIVG---CEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
K G F+ +L V +G ++ T + + + G + + +K +FR T +
Sbjct: 82 KTGKQFTPKYLRVKLGDHKPKVTATFFNANWMIEELPVGTRLMLSGEVK-YFRDTVQLNH 140
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYP 387
P +E SG+ +S ++ +D+ + +PIY
Sbjct: 141 PAFLVLESP---------SGRTIGTKS-----LKTIAEASGASGEDMLAEFEKEFFPIYT 186
Query: 388 SKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA 447
+ + + + I + L L DP+PK Q+ GL+ A IH + E D A
Sbjct: 187 ASAKMQSWDIYRCIRQVLAVLDPIPDPLPKSFVQQRGLMSEDQALRAIHLAANSTERDRA 246
Query: 448 RKRLIFDEFFYLQLG---RLYQMLEGLG--TQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
R+RL +DE LQ G R Y L G +GL+ R+
Sbjct: 247 RERLTYDEAIGLQWGLVARRYGELAASGPSAPLRVDGLVAALRE---------------- 290
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
LP+ LT+ Q + I +L PMNR+LQG+VG GKT+V+ LA ++++ +GYQ
Sbjct: 291 ----RLPFELTAGQREVLDVISGELASTRPMNRMLQGEVGSGKTIVSVLAMLQMVDAGYQ 346
Query: 563 AAFMVPTELLATQHYEHL------LKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQ 616
A + PTE+LATQH + L + + D+H ++ALLTGS +Q R +R ++
Sbjct: 347 CALLAPTEVLATQHARSVRDVLGPLAMAGELGGDEHGTRVALLTGSMTPQQKRAVRDEVA 406
Query: 617 TGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNS 676
+G +VIGTH+L+ + VEF L + +VDEQ RFGV QR +K
Sbjct: 407 SGAAGIVIGTHALLQDAVEFDNLGMVVVDEQHRFGVEQRDTLRAK--------------- 451
Query: 677 DGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+P + + PH+L M+ATPIPRT+AL +YGD+ + + +LP GR PI + I
Sbjct: 452 --AP---EGLTPHLLVMTATPIPRTVALTVYGDLETSTLRELPRGRQPITSNTI 500
>gi|345868468|ref|ZP_08820454.1| ATP-dependent DNA helicase RecG [Bizionia argentinensis JUB59]
gi|344047108|gb|EGV42746.1| ATP-dependent DNA helicase RecG [Bizionia argentinensis JUB59]
Length = 715
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 166/510 (32%), Positives = 248/510 (48%), Gaps = 73/510 (14%)
Query: 228 CGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGC 287
G +T + L++ FP Y LD QYF G + S + +VI
Sbjct: 27 LGIHTYQDLINLFPNRY---------LDRTQYFKING--LQSNNAEVQV---VGKVIKFE 72
Query: 288 EIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSG 347
EIA ++G + ++ +K+ R P++ + G F
Sbjct: 73 EIAQKRGKRLVATFQDETGTMELVWFRGQKWIRDNLKLQTPYVIFGKTNSYNGRF----- 127
Query: 348 KVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLN-ASLLRDTIARALQ 406
S H EM L++E + SLR+ +P IYPS LN + + + +Q
Sbjct: 128 ------SMPHPEME------LQEEHEASLRSAMQP--IYPSTEKLNNKGITNRMVNKIMQ 173
Query: 407 ALPAN-----FDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQL 461
L + + EI + L+ +A IH PK+ + A+ RL F+E FY+QL
Sbjct: 174 QLFVETKGRFIETLSPEILESEKLISKSEALFNIHFPKNQELLARAQYRLKFEELFYIQL 233
Query: 462 GRLYQML----EGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQL 517
+ + L + G F+K G N+ Y E LP+ LT++Q
Sbjct: 234 QLILKNLIHKSKIKGLPFDKVG-------EYFNSFYKE-----------HLPFELTNAQK 275
Query: 518 SAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHY 577
+ EI DL MNRLLQGDVG GKT+VAF+A + + SG+QA + PTE+L+ QHY
Sbjct: 276 RVLKEIRQDLGSKAQMNRLLQGDVGSGKTIVAFMAMLIALDSGFQACLIAPTEILSVQHY 335
Query: 578 EHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFS 637
LL+ +K I +LTGS+ R I + L+ G++ ++IGTH+++ +KV+F
Sbjct: 336 NGLLEWC-----NKLNISIKILTGSSKTSSRREIHESLENGELQILIGTHAVLEDKVKFK 390
Query: 638 ALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATP 697
L LAI+DEQ RFGV QR SKL+ S ++ S + PH+L M+ATP
Sbjct: 391 NLGLAIIDEQHRFGVEQR----SKLWRKGPQSSPQSTENEAS---QNIIPPHILVMTATP 443
Query: 698 IPRTLALALYGDMSLTQITDLPPGRIPIKT 727
IPRTLA+++YGD+ ++ I +LPPGR IKT
Sbjct: 444 IPRTLAMSVYGDLDISVIDELPPGRQAIKT 473
>gi|163790813|ref|ZP_02185238.1| ATP-dependent DNA helicase RecG [Carnobacterium sp. AT7]
gi|159873881|gb|EDP67960.1| ATP-dependent DNA helicase RecG [Carnobacterium sp. AT7]
Length = 682
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 164/528 (31%), Positives = 245/528 (46%), Gaps = 92/528 (17%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIIS 268
+S +P + ++ L G +T+ LL H+P Y D+Q + +++D + G ++S
Sbjct: 8 SVSVLPYVGEKRLEALHQLGIHTINDLLSHYPIRYEDIQERDLLEIEDQEKVTLKGNVVS 67
Query: 269 ----SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
SR SF +I I+ T F
Sbjct: 68 EAVVSRFGPKKNRLSFRLIIEHAVISVT-------------------------------F 96
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ +LKS K GE + V GK A R + I +L D KG
Sbjct: 97 FNQAYLKS---KIVTGEEIAVFGKWDAKRKS------LTGIKILGTRSD---SEKGDFES 144
Query: 385 IYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
+Y + + S + I A + + VP E+ ++ L+ DA +H P +
Sbjct: 145 VYSANKHIKQSTILQLITEAYNLYQDHIPEVVPPELRIKYRLISHRDAVYAMHFPASEKQ 204
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
AR+ ++F+EF LYQM + ++ K +K + + +
Sbjct: 205 KKQARREVVFEEFL------LYQM---------RMQIVRKKQKAMGKGNTLNYNVTDLRN 249
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
+ LP+ LT +Q ++EI DL+QP+ M+RLLQGDVG GKT+VA +A G Q+
Sbjct: 250 FIETLPFELTKAQKRVVNEICSDLRQPIHMHRLLQGDVGSGKTIVAAIALYAATNVGVQS 309
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A MVPTE+LA QH E L +L + +E +IALLTGST K R+I + L G++ ++
Sbjct: 310 ALMVPTEILAEQHMESLSELFNPLE-----VRIALLTGSTKTKDRRLILEQLANGELDVL 364
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
IGTH+LI + V FS L L I DEQ RFGV QR ++ G D
Sbjct: 365 IGTHALIQQDVYFSKLGLVITDEQHRFGVNQR----------------KLLRDKGKDAD- 407
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
VL M+ATPIPRTLA+ YG+M ++ I ++P GRIPI+T I+
Sbjct: 408 ------VLFMTATPIPRTLAITAYGEMDVSIIDEMPAGRIPIQTTWIK 449
>gi|372220920|ref|ZP_09499341.1| ATP-dependent DNA helicase RecG [Mesoflavibacter zeaxanthinifaciens
S86]
Length = 701
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 168/513 (32%), Positives = 247/513 (48%), Gaps = 94/513 (18%)
Query: 228 CGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGC 287
G T LL +P Y LD QY+ S+ +G + IV
Sbjct: 28 LGLETYGDLLQFYPNRY---------LDKTQYYKI------SQLHNSGADVQIVGKIV-- 70
Query: 288 EIADTETTSGDEVVNI---DSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVC 344
+ E G +V ++GQ + ++ FRG ++ I+ K+
Sbjct: 71 HLKTVEQKRGKRLVATYVDETGQMELVW------FRGHKW--------IKENIKMNTPYV 116
Query: 345 VSGKVRAMRSNNHYEMREYNIDVLKDED---DLSLRAKGRPYPIYPS-----KGGLNASL 396
V GKV R + + M +++LKD +S++ PIYPS G+ +
Sbjct: 117 VFGKVN--RFGSTFSMPHPEMELLKDHQAGLKISMQ------PIYPSTEKLTNKGITNKV 168
Query: 397 LRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDE 455
+ + + A ANF + + + + E LL ++ + IH PK D A+ RL F+E
Sbjct: 169 VSKMVQQLFMATKANFSETLSQGLLNELNLLPRPESLLNIHFPKSQDLLAKAQFRLKFEE 228
Query: 456 FFYLQLGRLYQMLEGLGTQFEK-EGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTS 514
FY+QL Q+L + K +G+ + N Y LP+ LT+
Sbjct: 229 LFYVQL----QLLSKKAVRKRKIKGMPFTAVGEKFNEFYAN-----------HLPFELTN 273
Query: 515 SQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLAT 574
+Q I EI D+ MNRLLQGDVG GKT+VA + + I + YQA M PTE+LA
Sbjct: 274 AQKRVIKEIRNDMGSSAQMNRLLQGDVGSGKTIVALMCMLLAIDNSYQACLMAPTEILAQ 333
Query: 575 QHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKV 634
QHY L +LL K KIALLTGST + + L+ G++ +++GTH+++ +KV
Sbjct: 334 QHYNGLKELL-----HKTDIKIALLTGSTKKAERTFLHNQLENGNLNILVGTHAVLEDKV 388
Query: 635 EFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMS 694
+F L LAI+DEQ RFGV QR SKL+ + + PH+L M+
Sbjct: 389 QFKNLGLAIIDEQHRFGVAQR----SKLWQKNT------------------IPPHILVMT 426
Query: 695 ATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
ATPIPRTLA++LYGD+ ++ I +LPPGR PIKT
Sbjct: 427 ATPIPRTLAMSLYGDLDISVIDELPPGRKPIKT 459
>gi|390946538|ref|YP_006410298.1| ATP-dependent DNA helicase RecG [Alistipes finegoldii DSM 17242]
gi|390423107|gb|AFL77613.1| ATP-dependent DNA helicase RecG [Alistipes finegoldii DSM 17242]
Length = 712
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 166/530 (31%), Positives = 243/530 (45%), Gaps = 84/530 (15%)
Query: 207 LDKCISCVPGLSKRLYHQLEN-CGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGE 265
LD I V G+ + L+ G TL +L H+P Y D I E
Sbjct: 14 LDNDIKYVGGVGEARARLLDKELGIRTLGDMLSHYPFRYIDRTKV----------YRIAE 63
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFT 325
I A F I G A T G+KK+ +++
Sbjct: 64 ITEG----APTLLQFRARITGVAYAGT-------------GRKKRFTAYVQDPTGSAELV 106
Query: 326 SIPFLKSIEGKHKVGEFVCVSGK---VRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
+K IE + +VG + G+ R + S H E+ E LS +A+
Sbjct: 107 WFQGIKWIEKRVEVGREYLIFGRPSFYRGLLSMAHPELETM-------EQALSRKAESGM 159
Query: 383 YPIYPSKGGLNASL----LRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQ 437
IYPS L+ L + I + + D +P+ + +GL+ L DAY IH
Sbjct: 160 QGIYPSTEKLSNVLGAKGMYQIICNTWALVKDHITDCMPEAVRARYGLIPLRDAYYNIHF 219
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGW 497
P+ + A+ RL FDE +QL + E L + G L N Y E
Sbjct: 220 PQSAEMLRQAQYRLKFDELLGIQLNVQSRRTERLS---KNNGFLFMKVGGVFNTFYNE-- 274
Query: 498 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
LP+ LT +Q + EI D MNRLLQGDVG GKT+VA ++ + +
Sbjct: 275 ---------KLPFPLTGAQKRVVKEIRQDTVTGFQMNRLLQGDVGSGKTLVALMSMLLAV 325
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
+G+QA M PTE+LA QH+ + ++L+ M+ K A+LTGS+ VK+ R+ + + +
Sbjct: 326 DNGFQACMMAPTEILARQHFATITRMLEGMD-----VKTAVLTGSSKVKERRLALEGIAS 380
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
G++ ++IGTH+LI ++V+F+ L ++DEQ RFGV QR R +K
Sbjct: 381 GEVDILIGTHALIEDRVQFANLGFVVIDEQHRFGVEQRARLWTK---------------- 424
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
PH+L M+ATPIPRTLA+ LYGD+ ++ I +LPPGR PIKT
Sbjct: 425 ------NEQPPHILVMTATPIPRTLAMTLYGDLDVSVIDELPPGRRPIKT 468
>gi|334364770|ref|ZP_08513750.1| ATP-dependent DNA helicase RecG [Alistipes sp. HGB5]
gi|313159146|gb|EFR58521.1| ATP-dependent DNA helicase RecG [Alistipes sp. HGB5]
Length = 702
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 166/530 (31%), Positives = 243/530 (45%), Gaps = 84/530 (15%)
Query: 207 LDKCISCVPGLSKRLYHQLEN-CGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGE 265
LD I V G+ + L+ G TL +L H+P Y D I E
Sbjct: 4 LDNDIKYVGGVGEARARLLDKELGIRTLGDMLSHYPFRYIDRTKV----------YRIAE 53
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFT 325
I A F I G A T G+KK+ +++
Sbjct: 54 ITEG----APTLLQFRARITGVAYAGT-------------GRKKRFTAYVQDPTGSAELV 96
Query: 326 SIPFLKSIEGKHKVGEFVCVSGK---VRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
+K IE + +VG + G+ R + S H E+ E LS +A+
Sbjct: 97 WFQGIKWIEKRVEVGREYLIFGRPSFYRGLLSMAHPELETM-------EQALSRKAESGM 149
Query: 383 YPIYPSKGGLNASL----LRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQ 437
IYPS L+ L + I + + D +P+ + +GL+ L DAY IH
Sbjct: 150 QGIYPSTEKLSNVLGAKGMYQIICNTWALVKDHITDCMPEAVRARYGLIPLRDAYYNIHF 209
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGW 497
P+ + A+ RL FDE +QL + E L + G L N Y E
Sbjct: 210 PQSAEMLRQAQYRLKFDELLGIQLNVQSRRTERLS---KNNGFLFMKVGGVFNTFYNE-- 264
Query: 498 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
LP+ LT +Q + EI D MNRLLQGDVG GKT+VA ++ + +
Sbjct: 265 ---------KLPFPLTGAQKRVVKEIRQDTVTGFQMNRLLQGDVGSGKTLVALMSMLLAV 315
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
+G+QA M PTE+LA QH+ + ++L+ M+ K A+LTGS+ VK+ R+ + + +
Sbjct: 316 DNGFQACMMAPTEILARQHFATITRMLEGMD-----VKTAVLTGSSKVKERRLALEGIAS 370
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
G++ ++IGTH+LI ++V+F+ L ++DEQ RFGV QR R +K
Sbjct: 371 GEVDILIGTHALIEDRVQFANLGFVVIDEQHRFGVEQRARLWTK---------------- 414
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
PH+L M+ATPIPRTLA+ LYGD+ ++ I +LPPGR PIKT
Sbjct: 415 ------NEQPPHILVMTATPIPRTLAMTLYGDLDVSVIDELPPGRRPIKT 458
>gi|373955772|ref|ZP_09615732.1| ATP-dependent DNA helicase RecG [Mucilaginibacter paludis DSM
18603]
gi|373892372|gb|EHQ28269.1| ATP-dependent DNA helicase RecG [Mucilaginibacter paludis DSM
18603]
Length = 702
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 142/411 (34%), Positives = 218/411 (53%), Gaps = 64/411 (15%)
Query: 330 LKSIEGKHKVGEFVCVSGK---VRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
+K IE VG+ V GK H E+ Y+ + +K + +L L+ P Y
Sbjct: 102 IKWIEKSLIVGKAYVVFGKPGLFNGKAQMAHPEIELYSPEAIKKQGNLKLQ------PAY 155
Query: 387 PSKG-----GLNASLLRDTIARALQALPANFD-PVPKEITQEFGLLCLFDAYMGIHQPKH 440
S L++ ++ IA L+ + + +P+ + Q+ L+ +AYM IH P
Sbjct: 156 SSTEKLKPFSLDSKGIQKLIAILLEQTAKDIEESIPQHLLQKLRLIGRREAYMNIHFPAD 215
Query: 441 IDEADLARKRLIFDEFFYLQL----GRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG 496
+LA RL F+E F++Q +L L+ G F G + Y N Y
Sbjct: 216 TSHLNLAVDRLKFEELFFIQFKLLKNKLLHTLKFKGNIF---GTVGSY----FNEFYKN- 267
Query: 497 WSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEV 556
LP+ LT++Q + EI D ++ + MNRLLQGDVG GKTVVA ++ +
Sbjct: 268 ----------KLPFDLTNAQKRVLKEIRQDTQRGIQMNRLLQGDVGSGKTVVALMSMLLA 317
Query: 557 IGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQ 616
I +G+Q M PTE+LA QHY+ + +L+D+ ++ALLTGST K+ +++ + L+
Sbjct: 318 IDNGFQTCIMAPTEILANQHYQSIEQLIDD-----EFLEVALLTGSTSAKKRKVLHQKLE 372
Query: 617 TGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNS 676
+GD+ ++IGTH+LI +KV+F L ++DEQ RFGV QR +KL+ ++
Sbjct: 373 SGDLKILIGTHALIEDKVQFKNLGFVVIDEQHRFGVEQR----AKLWRKNI--------- 419
Query: 677 DGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PHVL M+ATPIPRTLA+ LYGD+ ++ I +LP GR PI+T
Sbjct: 420 ---------IPPHVLVMTATPIPRTLAMTLYGDLDVSVIDELPAGRKPIET 461
>gi|389843433|ref|YP_006345513.1| ATP-dependent DNA helicase RecG [Mesotoga prima MesG1.Ag.4.2]
gi|387858179|gb|AFK06270.1| ATP-dependent DNA helicase RecG [Mesotoga prima MesG1.Ag.4.2]
Length = 785
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 133/347 (38%), Positives = 186/347 (53%), Gaps = 43/347 (12%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
P+Y G++ ++R + R L + + D VP IT E GLL A+ IH PK + E
Sbjct: 246 PVYSLTSGISMKMMRKIVKRNLGLVRSLDDLVPSSITTERGLLPRKHAFTAIHFPKSLYE 305
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
AR+ L ++EFF + L++ Q KE E L+K+
Sbjct: 306 IRKARESLAYEEFFLFETTILFR-----KRQIRKE----------YQGLQKEISGVLSKR 350
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
L+ +LP+ LT Q++A EI D++ PMNRLLQGDVG GKT+VA LA ++ +GYQ+
Sbjct: 351 LIESLPFELTKDQVTAFEEIRDDMRAASPMNRLLQGDVGSGKTLVAELAMVDNYEAGYQS 410
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A MVPT +LA QHYE + + L + + LLTGS + +R L+ G+I +V
Sbjct: 411 ALMVPTSVLAMQHYEKIKRELSPI-----GIETGLLTGSLKKNEQDFVRMRLKKGEIDVV 465
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GTH+LI + VEF L L +VDEQ RFGV QR +K G D
Sbjct: 466 VGTHALIQDGVEFKNLGLVVVDEQHRFGVKQRETLTTK----------------GKLLDS 509
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
L M+ATPIPRTLAL +YGD+ ++ I LP GR P++T I+
Sbjct: 510 -------LVMTATPIPRTLALTVYGDLDISTILTLPKGRSPVRTIIL 549
>gi|160892744|ref|ZP_02073534.1| hypothetical protein CLOL250_00275 [Clostridium sp. L2-50]
gi|156865785|gb|EDO59216.1| ATP-dependent DNA helicase RecG [Clostridium sp. L2-50]
Length = 676
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 159/538 (29%), Positives = 254/538 (47%), Gaps = 104/538 (19%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTY------ADLQNAQIDLDDGQY 259
L DK ++C+ G+ ++ L G T+ L+H++PRTY D+Q+ Q D
Sbjct: 3 LKDK-VTCIKGIGEKTAGNLAKLGISTVSDLIHYYPRTYITYMDPVDIQDIQADERQA-- 59
Query: 260 FIFIGEIISSRGMKAGCSFSFLEV--IVGCEIADTETTSGDEVVNIDSGQKKKIYLH--- 314
+ I+SR +EV + G IA +G K + +
Sbjct: 60 ---VSVTINSR----------VEVKKLRGFSIATAYAKDY-------TGTIKLTWFNCPF 99
Query: 315 LKKFFR-GTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDD 373
L+ +F G R+ + E K+K G + M +Y + +Y ++LK+
Sbjct: 100 LRNYFHIGDRYIFVG-----EVKYKNGMY--------TMSQPEYYTVPQYQ-EILKEWQ- 144
Query: 374 LSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYM 433
P+Y G+ + ++ + L + D +P++I E+ L+ +A
Sbjct: 145 ----------PVYGCTAGITSKTIQKAVKGTLPLIQTLSDYIPEDIRDEYDLMRANEAVT 194
Query: 434 GIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAY 493
IH P D A KR+ FDEF Y+ +E + + E + + KY + ++
Sbjct: 195 HIHFPDTEDHLRAAIKRVAFDEF--------YEFIENMHSLKEHDTV--KYNQAKIP--- 241
Query: 494 MEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLAC 553
++ + +LPY LT +Q+ A+ +I+ D+ MNRL+QGDVG GKT+VA +A
Sbjct: 242 ---FTEQVTGFIESLPYRLTGAQMDAVRDIMADMNSEHVMNRLVQGDVGSGKTIVAAIAL 298
Query: 554 MEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRK 613
GYQ M PTE+LA QH++ L L + + + LLTGS K+ R +
Sbjct: 299 FACATQGYQGVIMAPTEVLANQHFKELTGLF-----EPYGIHVTLLTGSMTAKEKREAYQ 353
Query: 614 DLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAM 673
++ +++GTH+LI +KVE+ L L + DEQ RFGV QR + S+ G
Sbjct: 354 EIAEHRADVIVGTHALIQDKVEYDNLALVVTDEQHRFGVRQREKL-------SLKGG--- 403
Query: 674 VNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
PHVL MSATPIPRTLA+ +YGD+ ++ I +LP GRIPIK +++
Sbjct: 404 -------------TPHVLVMSATPIPRTLAIIMYGDLDISVINELPAGRIPIKNCVVD 448
>gi|150025089|ref|YP_001295915.1| ATP-dependent DNA helicase RecG [Flavobacterium psychrophilum
JIP02/86]
gi|149771630|emb|CAL43104.1| ATP-dependent DNA helicase RecG [Flavobacterium psychrophilum
JIP02/86]
Length = 701
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 164/522 (31%), Positives = 259/522 (49%), Gaps = 111/522 (21%)
Query: 228 CGFYTLRKLLHHFPRTYAD---------LQNAQIDLDDGQYFIFIGEIISSRGMKAGCSF 278
G Y L++ +P Y D LQN+ ++ IG++I + ++
Sbjct: 27 LGVYKYGDLINFYPNRYLDRTKYYKISELQNSSAEVQ------IIGKVIHIKSVEFAKGK 80
Query: 279 SFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHK 338
S L V I DT GQ + ++ F+G ++ ++ K
Sbjct: 81 SRL---VATFIDDT-------------GQMELVW------FQGQKW--------VKESLK 110
Query: 339 VGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGL-NASLL 397
+ + GK + NN + M +++L E + S+R +P +YPS L N +
Sbjct: 111 LNVVYVIFGKTTSF--NNTFNMAHPEMELL-SEHEQSIRLAMQP--VYPSTEKLTNRGIS 165
Query: 398 RDTIARALQALPANF-----DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLI 452
+ + +Q L + + +P + +E L+ +A + IH PK+ + A+ RL
Sbjct: 166 NKVVNKMMQQLFSETHTLFSETLPIYLIEELKLISKKEALINIHFPKNAEALAKAQFRLK 225
Query: 453 FDEFFYLQLGRLYQML----EGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRAL 508
F+E F++QL + + L + G F+K G + T+ L
Sbjct: 226 FEELFFIQLQLITKNLIRKHKIKGFPFDKVG------------------NYFTEFFNNHL 267
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
P++LT++Q + EI D+ P MNRLLQGDVG GKT+VAF++ + + +G+QA M P
Sbjct: 268 PFNLTNAQKRVLKEIRNDMGNPAQMNRLLQGDVGSGKTIVAFMSMLLALDNGFQACLMAP 327
Query: 569 TELLATQHYEHLLKLLDNMEEDKHKP---KIALLTGSTPVKQSRMIRKDLQTGDITLVIG 625
TE+LA QH+ LL+L KP I +LTGS+ K ++I ++L+ G + ++IG
Sbjct: 328 TEILANQHFIGLLEL--------SKPLNINIKILTGSSNTKARKIIHEELENGSLHILIG 379
Query: 626 THSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQH 685
TH+L+ +KV+F L LAI+DEQ RFGV QR SKL+ +
Sbjct: 380 THALLEDKVQFKNLGLAIIDEQHRFGVEQR----SKLWKKNT------------------ 417
Query: 686 MAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PHVL M+ATPIPRTLA++LYGD+ ++ I +LPPGR PIKT
Sbjct: 418 IPPHVLVMTATPIPRTLAMSLYGDLDISVIDELPPGRKPIKT 459
>gi|160890807|ref|ZP_02071810.1| hypothetical protein BACUNI_03252 [Bacteroides uniformis ATCC 8492]
gi|270295805|ref|ZP_06202005.1| ATP-dependent DNA helicase RecG [Bacteroides sp. D20]
gi|317479756|ref|ZP_07938878.1| ATP-dependent DNA helicase RecG [Bacteroides sp. 4_1_36]
gi|156859806|gb|EDO53237.1| ATP-dependent DNA helicase RecG [Bacteroides uniformis ATCC 8492]
gi|270273209|gb|EFA19071.1| ATP-dependent DNA helicase RecG [Bacteroides sp. D20]
gi|316904126|gb|EFV25958.1| ATP-dependent DNA helicase RecG [Bacteroides sp. 4_1_36]
Length = 698
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 174/516 (33%), Positives = 248/516 (48%), Gaps = 97/516 (18%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNAQ-IDLDDGQ--YFIFIGEIISSRGMKAGCSFSFLE 282
+ G Y+L LL++FP Y D I DG Y GEI+S
Sbjct: 25 KELGIYSLHDLLYYFPYKYVDRSRIYYIQEIDGTMPYIQLKGEILSFE------------ 72
Query: 283 VIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIE---GKHKV 339
T+G+ G+++++ H F GT + + + I+ GK+KV
Sbjct: 73 ------------TAGE-------GRQRRLIAH---FSDGTGVVDLVWFQGIKYLVGKYKV 110
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG-RPYPIYPSK---GGLNAS 395
+ V GK N M +ID DL L + G +PY K LN+
Sbjct: 111 HQEYIVFGKPTFF--NGRINMAHPDID---SASDLKLSSMGLQPYYNTTEKMKRSSLNSH 165
Query: 396 LLRDTIARALQALPANFDPVPKE----ITQEFGLLCLFDAYMGIHQPKHIDEADLARKRL 451
+ + +Q L +P+P+ I E L+ L +A + IH P + D A+ RL
Sbjct: 166 AIEKMMNTVVQQLR---EPLPETLSPAILAEHHLMPLTEALVNIHFPANPDLLRKAQYRL 222
Query: 452 IFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYS 511
F+E FY+QL L ++ K D+ RK R + R LP+
Sbjct: 223 KFEELFYVQLNIL---------RYAK----DRQRKYR-GYIFERVGEVFNTFYSRNLPFE 268
Query: 512 LTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTEL 571
LT++Q + EI D+ MNRLLQGDVG GKT+VA ++ + + +G+QA M PTE+
Sbjct: 269 LTNAQKRVLKEIRKDVGSGKQMNRLLQGDVGSGKTLVALMSMLMALDNGFQACMMAPTEI 328
Query: 572 LATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIA 631
LA QHYE + +LL ME ++ LLTGS K+ I L TGDI ++IGTH++I
Sbjct: 329 LANQHYETIRELLYGME-----VRVELLTGSVKGKRREAILAGLLTGDIHILIGTHAVIE 383
Query: 632 EKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVL 691
+ V F++L L ++DEQ RFGV QR R +K + P PHVL
Sbjct: 384 DTVNFASLGLVVIDEQHRFGVAQRARLWTK---------------NVQP-------PHVL 421
Query: 692 AMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
M+ATPIPRTLA+ LYGD+ ++ I +LPPGR PI T
Sbjct: 422 VMTATPIPRTLAMTLYGDLDVSVIDELPPGRKPIVT 457
>gi|423303920|ref|ZP_17281919.1| ATP-dependent DNA helicase RecG [Bacteroides uniformis CL03T00C23]
gi|423307358|ref|ZP_17285348.1| ATP-dependent DNA helicase RecG [Bacteroides uniformis CL03T12C37]
gi|392686611|gb|EIY79914.1| ATP-dependent DNA helicase RecG [Bacteroides uniformis CL03T00C23]
gi|392690373|gb|EIY83641.1| ATP-dependent DNA helicase RecG [Bacteroides uniformis CL03T12C37]
Length = 698
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 174/516 (33%), Positives = 248/516 (48%), Gaps = 97/516 (18%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNAQ-IDLDDGQ--YFIFIGEIISSRGMKAGCSFSFLE 282
+ G Y+L LL++FP Y D I DG Y GEI+S
Sbjct: 25 KELGIYSLHDLLYYFPYKYVDRSRIYYIQEIDGTMPYIQLKGEILSFE------------ 72
Query: 283 VIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIE---GKHKV 339
T+G+ G+++++ H F GT + + + I+ GK+KV
Sbjct: 73 ------------TAGE-------GRQRRLIAH---FSDGTGVVDLVWFQGIKYLVGKYKV 110
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG-RPYPIYPSK---GGLNAS 395
+ V GK N M +ID DL L + G +PY K LN+
Sbjct: 111 HQEYIVFGKPTFF--NGRINMAHPDID---SASDLKLSSMGLQPYYNTTEKMKRSSLNSH 165
Query: 396 LLRDTIARALQALPANFDPVPKE----ITQEFGLLCLFDAYMGIHQPKHIDEADLARKRL 451
+ + +Q L +P+P+ I E L+ L +A + IH P + D A+ RL
Sbjct: 166 AIEKMMNTVVQQLR---EPLPETLSPAILAEHHLMPLTEALVNIHFPANPDLLRKAQYRL 222
Query: 452 IFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYS 511
F+E FY+QL L ++ K D+ RK R + R LP+
Sbjct: 223 KFEELFYVQLNIL---------RYAK----DRQRKYR-GYIFERVGEVFNTFYSRNLPFE 268
Query: 512 LTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTEL 571
LT++Q + EI D+ MNRLLQGDVG GKT+VA ++ + + +G+QA M PTE+
Sbjct: 269 LTNAQKRVLKEIRKDVGSGKQMNRLLQGDVGSGKTLVALMSMLMALDNGFQACMMAPTEI 328
Query: 572 LATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIA 631
LA QHYE + +LL ME ++ LLTGS K+ I L TGDI ++IGTH++I
Sbjct: 329 LANQHYETIRELLYGME-----VRVELLTGSVKGKRREAILAGLLTGDIHILIGTHAVIE 383
Query: 632 EKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVL 691
+ V F++L L ++DEQ RFGV QR R +K + P PHVL
Sbjct: 384 DTVNFASLGLVVIDEQHRFGVAQRARLWTK---------------NVQP-------PHVL 421
Query: 692 AMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
M+ATPIPRTLA+ LYGD+ ++ I +LPPGR PI T
Sbjct: 422 VMTATPIPRTLAMTLYGDLDVSVIDELPPGRKPIVT 457
>gi|418421393|ref|ZP_12994567.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus subsp.
bolletii BD]
gi|363996473|gb|EHM17688.1| ATP-dependent DNA helicase RecG [Mycobacterium abscessus subsp.
bolletii BD]
Length = 746
Score = 215 bits (547), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 185/588 (31%), Positives = 254/588 (43%), Gaps = 142/588 (24%)
Query: 217 LSKRLYHQLEN---------CGFYTLRKLLHHFPRTYA---DLQNAQIDLDDGQY----- 259
LS RL H L N G T+ LLHH+PR Y+ L++ Q DG+
Sbjct: 4 LSDRLDHVLGNKASDVLDAEFGLITVEDLLHHYPRRYSTDFSLRDEQ----DGERAKPGE 59
Query: 260 ------FIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYL 313
FI E+ S R K FL V +G + T +
Sbjct: 60 HTTLVGFITSAELKSMRNRKG----QFLSVTLGSAPHAVQAT----------------FF 99
Query: 314 HLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDD 373
H K R +VG V +SG V R +Y VL+
Sbjct: 100 HPHKVKRDL---------------QVGNRVMLSGAVGEFRGKPQLTHPDYL--VLETALG 142
Query: 374 LSLRAKGRP-----------------------YPIYPSKGGLNASLLRDTIARALQALPA 410
S A+G +PIYP+ L + I R + +
Sbjct: 143 ESTEARGSTALRGIAGAARDASTAISAFHRNVFPIYPATKNLESW----DIYRCIDQVLT 198
Query: 411 NFDPVPKEITQ----EFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQ 466
DPVP+ + + E+GL+ L +A IH + E AR+RL FDE LQL +
Sbjct: 199 QLDPVPEALPEAVLAEYGLMSLDEALRKIHTSEDASEQKQARRRLAFDEALGLQLALAMR 258
Query: 467 MLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWD 526
G++ G P + A + L LL LP+ LT Q ++EI D
Sbjct: 259 R----GSEIGSAG-------PPMPLAQ----AGLRADLLGQLPFELTEGQRHVVAEIGED 303
Query: 527 LKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDN 586
L PMNRLLQG+VG GKTVVA LA M+ I +GYQ A + PTE+LA QH L +L +
Sbjct: 304 LAGVKPMNRLLQGEVGSGKTVVALLAMMQAIDAGYQCALLAPTEVLAVQHARSLRAMLGS 363
Query: 587 MEEDKH------KPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALR 640
+ IALLTGS + I+ D+ TG +VIGTH+L+ + V+F L
Sbjct: 364 LATAGELGAPDDATSIALLTGSMSPAVKKQIKADVATGLAGIVIGTHALLQDSVDFHNLG 423
Query: 641 LAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPR 700
L +VDEQ RFGV QR +K +P Q + PH+L M+ATPIPR
Sbjct: 424 LVVVDEQHRFGVEQRDALRAK-----------------AP---QGIVPHLLVMTATPIPR 463
Query: 701 TLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK------GYENVYK 742
T+AL ++GD+ + + +LP GR PI T + EK G+E + +
Sbjct: 464 TVALTVFGDLETSTLRELPQGRQPITTTAVFTREKPGWLARGWERIAE 511
>gi|317498522|ref|ZP_07956816.1| ATP-dependent DNA helicase RecG [Lachnospiraceae bacterium
5_1_63FAA]
gi|316894215|gb|EFV16403.1| ATP-dependent DNA helicase RecG [Lachnospiraceae bacterium
5_1_63FAA]
Length = 676
Score = 215 bits (547), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 127/347 (36%), Positives = 189/347 (54%), Gaps = 44/347 (12%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
P+YP GL L+ +A+ + + +P+ I ++ + A IH P+ ++
Sbjct: 145 PVYPLTSGLTNKLVSKAVAQTKDYIFHIPEYLPQNILDQYQPMEYHQAIWNIHFPESKEQ 204
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
A+KRLIFDEFF + ++ + G ++EG Y G K+
Sbjct: 205 LIKAKKRLIFDEFFIF-IAAMHMITSG--EDLKEEG-------------YKIGVCKEAKE 248
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
L++ LPY LT++Q A++E+ D+ MNRL+QGDVG GKT++A + + +GYQ
Sbjct: 249 LVKNLPYELTTAQKRALNEMAKDMASGKVMNRLVQGDVGSGKTILAVILLLMCAKAGYQG 308
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
M PTE+LA QHYE +LL++ + KIALLTGST K+ R + ++ G++ +V
Sbjct: 309 VLMAPTEVLAAQHYESFTELLES-----YDIKIALLTGSTKTKEKRETYQKIKDGEVDIV 363
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
IGTH++I +KVE++ L L I DEQ RFGV QR + K
Sbjct: 364 IGTHAVIQDKVEYNKLALVITDEQHRFGVRQRESLSLK---------------------- 401
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
PHVL MSATPIPRTLA+ LYGD+ ++ I +LP R+PIK ++
Sbjct: 402 -GKKPHVLVMSATPIPRTLAIILYGDLDVSIIDELPAERLPIKNCVV 447
>gi|386714295|ref|YP_006180618.1| ATP-dependent DNA helicase RecG [Halobacillus halophilus DSM 2266]
gi|384073851|emb|CCG45344.1| ATP-dependent DNA helicase RecG [Halobacillus halophilus DSM 2266]
Length = 678
Score = 215 bits (547), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 161/534 (30%), Positives = 253/534 (47%), Gaps = 94/534 (17%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIG 264
+L + IS + G+ ++L QL G +T+ LL +FP Y + + +L + G
Sbjct: 1 MLTQSISELKGIGEKLESQLNELGLFTIEDLLFYFPFRYDSYEVKPLTELTHNEKATIEG 60
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKK---IYLHLKKFFRG 321
E++S S SF G+KK L +++F
Sbjct: 61 EVVSE------PSLSFF------------------------GRKKSRLTFTLQVEQF--- 87
Query: 322 TRFTSIPFLKSIEGKH-KVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG 380
++ F ++ K G+ V V+GK ++ + I V + + S +++
Sbjct: 88 -AVKAVMFNRAFAKKQLHAGDTVTVTGK---------WDQQRLQITVSQFKKGES-KSQA 136
Query: 381 RPYPIYPSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPK 439
P+Y K G+ + LR I ++ A + P+E+ + + L A +H P
Sbjct: 137 PIQPVYTLKEGVPLTTLRKYIKASIDAYEHEIPEILPEELQRAYKLPERPQAIRQMHYPD 196
Query: 440 HIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSS 499
+ A++R I++EF QL K LL K+ + +
Sbjct: 197 NRIMLKHAKRRFIYEEFLIFQL---------------KMQLLRKHHRESTTGNAQSYDNG 241
Query: 500 LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
++ALP+ LT +Q +++EI+ D+K P MNRLLQGDVG GKT VA +A I +
Sbjct: 242 KLTSFVQALPFELTQAQKRSLAEILKDMKNPHRMNRLLQGDVGSGKTAVAAIALYASITA 301
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
G Q A MVPTE+LA QH++ L+++ + + +ALLTGS K+ R I + ++ GD
Sbjct: 302 GKQGALMVPTEILAEQHFQSLMEMFEG------RATVALLTGSIKGKKRREILESVRAGD 355
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
I ++IGTH+LI ++VEF L IVDEQ RFGV QR K Y
Sbjct: 356 IDILIGTHALIQDEVEFHDLGFVIVDEQHRFGVRQRRTLRDKGLY--------------- 400
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN 733
P VL M+ATPIPRTLA+ +GDM ++ I ++P GR P++TY ++G
Sbjct: 401 --------PDVLFMTATPIPRTLAITAFGDMDVSVIDEMPAGRKPVETYWVKGE 446
>gi|385811666|ref|YP_005848062.1| recG-like DNA helicase [Ignavibacterium album JCM 16511]
gi|383803714|gb|AFH50794.1| RecG-like DNA helicase [Ignavibacterium album JCM 16511]
Length = 736
Score = 215 bits (547), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 253/552 (45%), Gaps = 82/552 (14%)
Query: 204 EPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFI 263
E +L+ + + + + G ++R LL +FP + D
Sbjct: 6 ENILESSVQYIKSVGPKRAESFAKIGIKSIRDLLFYFPSRHLD----------------- 48
Query: 264 GEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK---FFR 320
S + A ++S+ ++ G E T E I+ K+ + + LK FF
Sbjct: 49 ----RSTVLTAAKAYSY--ILNGYEGEVTVIGKVVEREKINVRNKEILKVQLKDNTGFFE 102
Query: 321 GTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG 380
F S + + K GEF VS K + + ++ + D + +E+ S G
Sbjct: 103 CVWFQSAKYFYDV---FKEGEFFAVSAK-PVIDKYDRFQFVHPDFDRITEEESQSFLHTG 158
Query: 381 RPYPIYPSKGGLNAS-----LLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMG 434
+ P Y L A LR IA A++ + +P+EI + LL L +A
Sbjct: 159 KIIPFYRIPKELKARNIGDFSLRRIIAYAVEHYADEIEETLPEEILHQHNLLRLNEAIKN 218
Query: 435 IHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYM 494
H P+ + A+ R F+E FYL+L L L ++ + K KP
Sbjct: 219 FHFPQSQELFSRAKYRFKFEEIFYLEL------LLAL-----RKNKIQKKSKP----IKF 263
Query: 495 EGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACM 554
E + L K L LP+ LT +Q +SEI D+ PMNRLLQGDVG GKTVVA +A +
Sbjct: 264 EIKTELIKNFLNILPFELTDAQKKVLSEIKKDMLSDRPMNRLLQGDVGSGKTVVALIAML 323
Query: 555 EVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEE--DKHKPKIALLTG--STPVKQSRM 610
+ SGYQAA M PTE+LA QH +++ L+ + E K K++LL G + K R
Sbjct: 324 IAVDSGYQAALMAPTEILADQHAKNISSLMQKLNEVNKGKKVKVSLLLGGQTNSAKAKRE 383
Query: 611 IRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSG 670
+L DI +IGTH+LI EKV F L L ++DEQ RFGV QR K
Sbjct: 384 KENELLEADI--IIGTHALIEEKVSFRNLGLVVIDEQHRFGVKQRADLLGK--------- 432
Query: 671 MAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+AP VL MSATPIPRTL + LYGD+ ++ I ++P R PIKT ++
Sbjct: 433 --------------GLAPDVLIMSATPIPRTLTMTLYGDLDVSVINEMPKNRKPIKT-VL 477
Query: 731 EGNEKGYENVYK 742
G EK +YK
Sbjct: 478 RG-EKKLPEIYK 488
>gi|333996773|ref|YP_004529385.1| ATP-dependent DNA helicase RecG [Treponema primitia ZAS-2]
gi|333741262|gb|AEF86752.1| ATP-dependent DNA helicase RecG [Treponema primitia ZAS-2]
Length = 761
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 149/388 (38%), Positives = 194/388 (50%), Gaps = 53/388 (13%)
Query: 380 GRPYPIYPSKGGLNASLLRDTIARA-LQALPANFDPVPKEITQEFGLLCLFDAYMGIHQP 438
G P+YP +G L LR I +A +Q D +P+ I Q GL A H P
Sbjct: 153 GHIVPVYPLRGKLTQGNLRKFIRQAWIQYAKPLEDELPQAIIQRDGLFPKSLAIRAYHFP 212
Query: 439 KHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLL-DKYRKPRLNAAYMEGW 497
K ++E D ARK LI++E FYL++ + +E T+ + D R L AA G
Sbjct: 213 KSMEEKDQARKSLIYEELFYLEVMVGKRAMERRATRETSAPVSSDTARVTALQAAPSPGI 272
Query: 498 SS---------LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVV 548
S L LL LP+ LT Q +AISEI D+ P PM RLLQGDVG GKT+V
Sbjct: 273 SGVGSSGEFFPLQAHLLERLPFDLTPGQTAAISEINRDMDGPYPMARLLQGDVGSGKTLV 332
Query: 549 AFLACMEVI--GSGY------------------QAAFMVPTELLATQHYEHLLKLLDNME 588
AFLA + + GSG QA M PTELLA QH E+ +LL+ +
Sbjct: 333 AFLAALRAVEGGSGKAGRARQAAAPGQATALPGQAVIMAPTELLARQHAENAARLLEPL- 391
Query: 589 EDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQ 648
+ A LTG+ + K L GDI L +GTH+L + V + LRL ++DEQ
Sbjct: 392 ----GIRPAFLTGNIKAAGRSRLLKALAAGDIDLAVGTHALFSRDVAYRNLRLVVIDEQH 447
Query: 649 RFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYG 708
RFGV QR +K Y + P +L MSATPIPRTLAL ++G
Sbjct: 448 RFGVTQRQAIMAKGY-----------------AGENPALPDLLMMSATPIPRTLALTVFG 490
Query: 709 DMSLTQITDLPPGRIPIKTYIIEGNEKG 736
DM ++ I DLPPGR PIKT++ +G
Sbjct: 491 DMDVSVIPDLPPGRKPIKTHLAREASEG 518
>gi|119717509|ref|YP_924474.1| ATP-dependent DNA helicase RecG [Nocardioides sp. JS614]
gi|119538170|gb|ABL82787.1| ATP-dependent DNA helicase RecG [Nocardioides sp. JS614]
Length = 750
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 177/544 (32%), Positives = 246/544 (45%), Gaps = 86/544 (15%)
Query: 207 LDKCISCVPGLSKRLYHQLEN-CGFYTLRKLLHHFPRTYADL-QNAQID-LDDGQYFIFI 263
LD + V G K+ +E G T+ LL HFPR Y + +ID L +G+ +
Sbjct: 4 LDTPVVAVLGDHKKKRKAIEERLGLRTVGDLLRHFPRRYVKTGELTRIDELHEGELLTVV 63
Query: 264 GEIISSRGMKAGCSFSFLEVIVGCEIADTETTSG----DEVVNIDSGQKKKIYLHLKKFF 319
G+I SS+ + E D T D V D G +I + K
Sbjct: 64 GQITSSK-------LNTYE--------DRRTHRPAYRVDVTVRTD-GPSFRISMFAKTRH 107
Query: 320 RGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDED--DLSLR 377
G E + VG GKV + R N + + DED LSL
Sbjct: 108 MGE--------WQQEKRMPVGRRGIFVGKVSSFRGNWQLTHPQVVLFGTPDEDAAQLSLD 159
Query: 378 AKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQ 437
A G YPIYP G+++ L+ +A AL + D VP E+ + GLL + A IH
Sbjct: 160 AIGELYPIYPLTKGVDSWDLQRAVAFALTMVDDVPDLVPPEVRERHGLLDVRTALRHIHN 219
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQM-----LEGLGTQFEKEGLLDKYRKPRLNAA 492
P + A++R F+E QL + L E GLL +
Sbjct: 220 PDDRAQITSAQRRFRFEEALVTQLVLARRRRAVRELGARARTGEDGGLLAAFDA------ 273
Query: 493 YMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLA 552
LP+ LT+ Q +EI DL QP PMNRLLQG+VG GKT+VA A
Sbjct: 274 --------------RLPFELTAGQREIGAEIEADLAQPHPMNRLLQGEVGSGKTLVALRA 319
Query: 553 CMEVIGSGYQAAFMVPTELLATQHYEHLLKL------LDNMEEDKHKPKIALLTGSTPVK 606
+ V+ SG QAA + PTE+LA QH+ + + + + LLTGS
Sbjct: 320 MLRVVDSGGQAALLAPTEVLAQQHHRSITAMLGDLAGGGMLGGAAEATNVELLTGSMTKA 379
Query: 607 QSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTS 666
Q L +G+ +VIGTH+L+ EKV F+ L L +VDEQ RFGV QR
Sbjct: 380 QRTAPMSRLASGEAGIVIGTHALLEEKVAFADLGLVVVDEQHRFGVEQRA---------- 429
Query: 667 MSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIK 726
A+ + G+P PHVL M+ATPIPRT+A+ ++GD+ + +T+LP GR PI+
Sbjct: 430 -----ALTDKAGTP-------PHVLVMTATPIPRTVAMTVFGDLETSTLTELPAGRAPIQ 477
Query: 727 TYII 730
T ++
Sbjct: 478 TNVV 481
>gi|332293535|ref|YP_004432144.1| ATP-dependent DNA helicase RecG [Krokinobacter sp. 4H-3-7-5]
gi|332171621|gb|AEE20876.1| ATP-dependent DNA helicase RecG [Krokinobacter sp. 4H-3-7-5]
Length = 700
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 161/513 (31%), Positives = 247/513 (48%), Gaps = 97/513 (18%)
Query: 229 GFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRG-MKAGCSFSFLEVIVGC 287
G +T + L+H FP Y +D QY+ IGE+ + ++ FS L++I G
Sbjct: 29 GIHTFQDLMHLFPNRY---------IDKTQYYK-IGELERNNADVQIIGKFSGLKMIEG- 77
Query: 288 EIADTETTSGDEVVNI---DSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVC 344
G +V ++GQ + ++ K+ R + + P++
Sbjct: 78 --------KGRRLVATFKDETGQMELVWFRGHKWIRESIKLNTPYV-------------- 115
Query: 345 VSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGL-NASLLRDTIAR 403
+ GK N ++ M +++L D + K P+YPS L N + +
Sbjct: 116 IFGKCNYY--NGNFSMPHPEMELLADHEK---SIKSAMQPVYPSTEKLSNRGITNKVVNG 170
Query: 404 ALQALPAN-----FDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFY 458
+Q L F+ + K I E L+ +A + +H P+ + A+ RL F+EFFY
Sbjct: 171 VMQTLFLECKNHLFESLSKPILTELKLMPKREALLNVHFPQSQEHLARAQYRLKFEEFFY 230
Query: 459 LQLGRLYQMLEGL----GTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTS 514
+QL ++ + G FEK G P Y + LP+ LT
Sbjct: 231 IQLQLAFKNVNHKTKIKGYPFEKIG-------PNFTTFYND-----------HLPFELTG 272
Query: 515 SQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLAT 574
+Q + EI DL MNRLLQGDVG GKT+VA ++ + + +G+QA M PT +LA
Sbjct: 273 AQKRVLKEIRHDLGTNAQMNRLLQGDVGSGKTIVALMSMLMALDNGFQACLMAPTAILAV 332
Query: 575 QHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKV 634
QHY L +L + I+LL GST + R+I + L+ G++ ++IGTH+L+ +KV
Sbjct: 333 QHYHGLKELCKELNTS-----ISLLQGSTKTSKRRIIHEQLENGELNILIGTHALLEDKV 387
Query: 635 EFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMS 694
+F L LA++DEQ RFGV QR SKL++ + PHVL M+
Sbjct: 388 KFKNLGLAVIDEQHRFGVKQR----SKLWHKN------------------EYPPHVLVMT 425
Query: 695 ATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
ATPIPRTLA+ +YGD+ ++ I +LPPGR IKT
Sbjct: 426 ATPIPRTLAMTVYGDLDVSVIDELPPGRKSIKT 458
>gi|429761492|ref|ZP_19293917.1| ATP-dependent DNA helicase RecG [Anaerostipes hadrus DSM 3319]
gi|429183745|gb|EKY24786.1| ATP-dependent DNA helicase RecG [Anaerostipes hadrus DSM 3319]
Length = 676
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/347 (36%), Positives = 189/347 (54%), Gaps = 44/347 (12%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
P+YP GL L+ +A+ + + +P+ I ++ + A IH P+ ++
Sbjct: 145 PVYPLTSGLTNKLVSKAVAQTKDYIFHIPEYLPQNILDQYQPMEYHQAIWNIHFPESKEQ 204
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
A+KRLIFDEFF + ++ + G ++EG Y G K+
Sbjct: 205 LIKAKKRLIFDEFFIF-IAAMHMITSG--EDLKEEG-------------YKIGVCKEAKE 248
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
L++ LPY LT++Q A++E+ D+ MNRL+QGDVG GKT++A + + +GYQ
Sbjct: 249 LVKNLPYELTTAQKRALNEMAKDMASGKVMNRLVQGDVGSGKTILAVILLLMCAKAGYQG 308
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
M PTE+LA QHYE +LL++ + KIALLTGST K+ R + ++ G++ +V
Sbjct: 309 VLMAPTEVLAAQHYESFTELLES-----YDIKIALLTGSTKAKEKRETYQKIKDGEVDIV 363
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
IGTH++I +KVE++ L L I DEQ RFGV QR + K
Sbjct: 364 IGTHAVIQDKVEYNKLALVITDEQHRFGVRQRESLSLK---------------------- 401
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
PHVL MSATPIPRTLA+ LYGD+ ++ I +LP R+PIK ++
Sbjct: 402 -GEKPHVLVMSATPIPRTLAIILYGDLDVSIIDELPAERLPIKNCVV 447
>gi|404481981|ref|ZP_11017210.1| ATP-dependent DNA helicase RecG [Clostridiales bacterium OBRC5-5]
gi|404344951|gb|EJZ71306.1| ATP-dependent DNA helicase RecG [Clostridiales bacterium OBRC5-5]
Length = 683
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 173/546 (31%), Positives = 267/546 (48%), Gaps = 96/546 (17%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTY----ADLQNAQIDLDDGQYFI 261
++D + + G+ + LE T++ LL H+P Y A + ++ + D+
Sbjct: 1 MIDISVKNIKGVGAKTAEYLEKLDIKTVKGLLKHYPIRYLEYKAPTKISEANKDE----- 55
Query: 262 FIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRG 321
EI+ +KA + S +IA T+ T +V+++
Sbjct: 56 ---EIV----IKATITKSISLTGPNRKIAVTKVTDFIDVLDV------------------ 90
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMRE-YNIDVLKDEDDLSLRAKG 380
+ + P+L++ K GE GK + RS N E Y ID K + G
Sbjct: 91 -IWYNSPYLRAT---LKQGESYIFVGKF-SKRSKNTLEHPTIYTIDEYK-------KKIG 138
Query: 381 RPYPIYPSKGGLNASLLRDTIARALQALP-ANFDP-VPKEITQEFGLLCLFDAYMGIHQP 438
PIY G+N + + I A + + +F+ +P+ I +EF L A IH P
Sbjct: 139 SFKPIYALTAGINNNAMEKLIKSAFEYIDDKDFEEYLPESILKEFSLEDRNKAVRNIHDP 198
Query: 439 KHIDEADL--ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG 496
I ++ L ++KRL FD+FF G ++L+ + + + ++ K K Y+E
Sbjct: 199 --ISKSSLFESKKRLAFDDFFRFLYG--MKLLKNKRLRVKSKNIVSKEIK------YLEE 248
Query: 497 WSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEV 556
S LP+ LT SQ + I EI+ D+ + V NRL+QGDVG GKTVVA +
Sbjct: 249 IKS-------TLPFKLTDSQNNVIDEILNDMSRGVVTNRLIQGDVGSGKTVVALICLYMA 301
Query: 557 IGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQ 616
+ SG+Q MVPTE+LA QH++ + + L N+E + PKI +LTGS K+ + + ++
Sbjct: 302 VKSGFQGVVMVPTEVLAKQHFKSMSETLGNLE---NPPKIGILTGSMTKKEHLAVYEKIE 358
Query: 617 TGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNS 676
G+I +V+GTH+L+ E V+F L L + DEQ RFGV QR T++S
Sbjct: 359 AGEIDIVVGTHALLVEDVKFKNLGLVVTDEQHRFGVRQR---------TTLS-------- 401
Query: 677 DGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN--E 734
D+ HVL MSATPIPRTLA+ LYGD+ ++ I P GR+PIK +I N E
Sbjct: 402 ------DKGEDVHVLVMSATPIPRTLAIILYGDLDISTIETKPVGRLPIKNAVITENDRE 455
Query: 735 KGYENV 740
K Y ++
Sbjct: 456 KAYRHI 461
>gi|238854784|ref|ZP_04645114.1| ATP-dependent DNA helicase RecG [Lactobacillus jensenii 269-3]
gi|260664015|ref|ZP_05864868.1| ATP-dependent DNA helicase RecG [Lactobacillus jensenii SJ-7A-US]
gi|313472296|ref|ZP_07812788.1| ATP-dependent DNA helicase RecG [Lactobacillus jensenii 1153]
gi|238832574|gb|EEQ24881.1| ATP-dependent DNA helicase RecG [Lactobacillus jensenii 269-3]
gi|239529856|gb|EEQ68857.1| ATP-dependent DNA helicase RecG [Lactobacillus jensenii 1153]
gi|260561901|gb|EEX27870.1| ATP-dependent DNA helicase RecG [Lactobacillus jensenii SJ-7A-US]
Length = 674
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 168/520 (32%), Positives = 252/520 (48%), Gaps = 94/520 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGEIISS 269
++ + G+ + LE+ Y++ LL +FP Y DL+ +D L+DGQ + G I+++
Sbjct: 9 VTKLKGVGPKTAAALESLSIYSVYDLLFYFPYRYDDLEMIPLDQLNDGQKVLLKG-IVAT 67
Query: 270 RGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPF 329
+ + + I +++ ++ F + P+
Sbjct: 68 EPFVSRFGYKKSRLSFKLRI-------DHDIIMVN-------------------FFNQPW 101
Query: 330 LKSIEGKHKVGEFVCVSGKVR-AMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPS 388
LK+ + +VG+ V V GK A +S + ++ + +E LS P+YP
Sbjct: 102 LKN---QLEVGKEVAVYGKYNLAKQSLSGFKF----VAAKNEESSLS--------PVYPV 146
Query: 389 KGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLAR 448
+ L + I AL D VP+ I Q++ L+ + +H+PK +EA LA+
Sbjct: 147 NRHIKQKKLVELIKLALAQKNELMDIVPENIRQKYRLMNDQELVEKMHEPKSPNEAKLAK 206
Query: 449 KRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRAL 508
+ IF EFF ++Q+ L T +G L +K LN KKL L
Sbjct: 207 RSAIFREFF------IFQIQLALLT-MRPQGRLGTAKKYDLNE---------IKKLTATL 250
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
P+ L+ Q ++EI DL + M RLLQGDVG GKTVVA A I +GYQAA MVP
Sbjct: 251 PFELSDDQKKVVNEIFADLHREKQMRRLLQGDVGSGKTVVAVFAIYAAITAGYQAALMVP 310
Query: 569 TELLATQHYEHLLKLLDNMEEDKHKP---KIALLTGSTPVKQSRMIRKDLQTGDITLVIG 625
TE+LA QH+ + +LL +P +IALLT ST + R I ++L G + +VIG
Sbjct: 311 TEILANQHFGKIAELL--------RPFGVRIALLTSSTKAMEKREIYRELADGTLNVVIG 362
Query: 626 THSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQH 685
TH+LI ++F L L I+DEQ RFGV QR + M+ +
Sbjct: 363 THALIQPSLKFKNLGLVIIDEQHRFGVNQRQKL--------------MIKGEN------- 401
Query: 686 MAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
P +LAM+ATPIPRTLAL YG+M +++I LP GR PI
Sbjct: 402 --PDLLAMTATPIPRTLALTAYGEMDVSEIRHLPAGRKPI 439
>gi|52080190|ref|YP_078981.1| ATP-dependent DNA helicase RecG [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|319646031|ref|ZP_08000261.1| RecG protein [Bacillus sp. BT1B_CT2]
gi|404489078|ref|YP_006713184.1| ATP-dependent DNA helicase RecG [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|52003401|gb|AAU23343.1| ATP-dependent DNA helicase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52348069|gb|AAU40703.1| ATP-dependent DNA helicase RecG [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|317391781|gb|EFV72578.1| RecG protein [Bacillus sp. BT1B_CT2]
Length = 682
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 164/552 (29%), Positives = 257/552 (46%), Gaps = 123/552 (22%)
Query: 203 IEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIF 262
+E L IS + G+ L G YT+ LL++FP Y D
Sbjct: 1 MEHNLQLSISVIKGVGTETEKTLNELGIYTVLDLLNYFPYRYDD---------------- 44
Query: 263 IGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSG----------QKKKIY 312
E+ D E + DE V ++ KK+
Sbjct: 45 ------------------------YELRDLEDVAHDERVTVEGKVHSEPSLAYYGKKRSR 80
Query: 313 LHLKKFFRGTRFTSI----PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVL 368
L + T++ P+LK K +G V V+GK R + + L
Sbjct: 81 LTFRLLVGNYLITAVCFNRPYLKK---KLAIGSIVTVTGKWDKHRQS-------VMVQEL 130
Query: 369 KD---EDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQA-LPANFDPVPKEITQEFG 424
K+ + D S+ P+Y K + +R I A+++ LP DP+P+++ +
Sbjct: 131 KNGPHQGDQSIE------PVYSVKENITVKTMRKLIQEAVRSHLPFAEDPLPEKLRTAYK 184
Query: 425 LLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKE---GLL 481
LL +A +H+P+ + AR+R +++EF QL ++ L +FE+E G+
Sbjct: 185 LLSYQEAVKAMHKPESREALKHARRRFVYEEFLLFQLK-----MQAL-RKFEREASDGIS 238
Query: 482 DKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDV 541
+R +N+ +++LP+ LT++Q A+ +I+ D+ MNRLLQGDV
Sbjct: 239 HTFRLEDVNS------------FVKSLPFPLTNAQAKALDDILRDMASGYKMNRLLQGDV 286
Query: 542 GCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTG 601
G GKT VA +A + SG+Q A MVPTE+LA QH + L+ L ++H +ALLT
Sbjct: 287 GSGKTAVAAIALYASLLSGFQGAMMVPTEILAEQHADSLVSLF-----EQHDVNVALLTS 341
Query: 602 STPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSK 661
S K+ R + + L+ G+I +++GTH+LI + V F L L I DEQ RFGV QR + SK
Sbjct: 342 SVKGKRRRELLERLKEGEIDILVGTHALIQDDVHFKQLGLVITDEQHRFGVEQRKKLRSK 401
Query: 662 LYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPG 721
KD P VL M+ATPIPRTLA+ ++G+M ++ I ++P G
Sbjct: 402 ------------------GKD-----PDVLFMTATPIPRTLAITVFGEMDVSVIDEMPAG 438
Query: 722 RIPIKTYIIEGN 733
R I+TY ++ +
Sbjct: 439 RKRIETYWVKHD 450
>gi|440780894|ref|ZP_20959365.1| RecG helicase [Clostridium pasteurianum DSM 525]
gi|440221482|gb|ELP60687.1| RecG helicase [Clostridium pasteurianum DSM 525]
Length = 678
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 169/534 (31%), Positives = 263/534 (49%), Gaps = 89/534 (16%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
IS + G+ ++ +L CG +++ LL +FPR Y ++ +D+ I + ++R
Sbjct: 7 ISYIKGVGPKIKMELNKCGIFSILDLLLYFPRDYENIPR----MDN------IAK--ANR 54
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFL 330
G K +I+ C E + + + S K ++ F+G F ++P++
Sbjct: 55 GNK---------IIINCRFIKNEGSFRSKNGKLIS---KLMFTDGFNLFKGIWF-NMPYI 101
Query: 331 KS---IEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYP 387
++ K+ + GK+ ++ E+ V+K+++ + PIY
Sbjct: 102 SKGFYVDNKY------TLMGKLNYIKGETVLEVP----IVIKEQNS----GTDKIVPIYS 147
Query: 388 SKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA 447
K L S I++ L + + +P I +++ L A IH PK+ E + A
Sbjct: 148 LKENLKNSYFTKIISQVLSKVIIE-ENLPDWIIEKYKFYSLDRAIRCIHNPKNFIELNEA 206
Query: 448 RKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRA 507
+KRL F E F L L ML+ + K+G+ K K LT+ L
Sbjct: 207 KKRLKFQELFTYSLKVL--MLKDYVNR-GKKGIAFKISK------------ELTE-LKEK 250
Query: 508 LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMV 567
+PY LT +Q I EI+ D K+ + MNRLLQGDVG GKT++A +A VI +GYQA +
Sbjct: 251 IPYDLTKAQSKVIREILIDEKKSIAMNRLLQGDVGSGKTIIALIAMFNVIKNGYQAVLLA 310
Query: 568 PTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTH 627
PTE+L+ QHY KLL + I LL GS K I+ +L+ G I ++IGTH
Sbjct: 311 PTEILSRQHYIEAEKLLSEFNIN-----IELLIGSISEKNKNRIKNELKEGKIHMIIGTH 365
Query: 628 SLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMA 687
+L+ + VEFS L L + DEQ RFGV+QR SKL+ + G+ D
Sbjct: 366 ALLEDNVEFSNLGLVVTDEQHRFGVMQR----SKLF------------NKGNNID----- 404
Query: 688 PHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVY 741
+L M+ATPIPRTL L LYGD+ ++ I +LPPGR + TY ++ +K E +Y
Sbjct: 405 --ILVMTATPIPRTLGLYLYGDLDVSIIDELPPGRKKVDTYYVD--KKDRERIY 454
>gi|424779934|ref|ZP_18206820.1| ATP-dependent DNA helicase RecG [Catellicoccus marimammalium
M35/04/3]
gi|422843473|gb|EKU27910.1| ATP-dependent DNA helicase RecG [Catellicoccus marimammalium
M35/04/3]
Length = 670
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 163/535 (30%), Positives = 251/535 (46%), Gaps = 95/535 (17%)
Query: 205 PLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADL-QNAQIDLDDGQYFIFI 263
P + + + + G+ + L+ G +T+ LL ++P + DL +N D + +
Sbjct: 2 PSIYEEVGQIKGIGAKTKGALQKLGIFTIEDLLTYYPFRFTDLRENETFDFSTEEKVVLK 61
Query: 264 GEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTR 323
GE+I C+ F G+K + L R R
Sbjct: 62 GEVIRP------CTVQFY-----------------------GGKKSRASFVLFSQGRPVR 92
Query: 324 --FTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
F + PFLK + + GE + + GK R +VL + + K
Sbjct: 93 VTFFNQPFLKK---QIRCGEEIAIYGKWNPSR------------NVLSG-IKIVPKTKEE 136
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKH 440
PIY + + A ++ I AL + + P++ +++ L +A IHQP+
Sbjct: 137 WEPIYHASKEIKAKTIQKWIQVALDQFSSVLPEILPQKYLEKYRLCSRKEALHWIHQPQT 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
E AR+RL ++E F QL L+ L Q E Y +L A
Sbjct: 197 KTEYQQARRRLAYEEAFLWQL-----QLKELKKQEATENATHSYNNEQLKA--------- 242
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
+R LPY LT Q ++EI D+K+ PMNRL+QGDVGCGKT+VA LA + +G
Sbjct: 243 ---FIRTLPYELTPDQKKVMNEICRDMKKSQPMNRLIQGDVGCGKTIVAILAAYAMTTAG 299
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
Q A MVPTE+LA QH++++ ++L + D H A LTGSTP K+ I K L+ G I
Sbjct: 300 KQTALMVPTEILAEQHFKNMEEVLPS---DIH---YACLTGSTPKKEREAIEKGLEEGTI 353
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+V+GTH+++ +++ ++ L LAI+DEQ RFGV QR A++
Sbjct: 354 DIVVGTHAIMQKEIHYADLGLAIIDEQHRFGVRQR---------------QALI------ 392
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
D+ A +L M+ATPIPRTLA G + ++ I LP GR PI+T+ + ++K
Sbjct: 393 --DKGEAVDILMMTATPIPRTLAQMTAGYLDISTIKTLPAGRKPIQTHYLSFDQK 445
>gi|333978689|ref|YP_004516634.1| ATP-dependent DNA helicase RecG [Desulfotomaculum kuznetsovii DSM
6115]
gi|333822170|gb|AEG14833.1| ATP-dependent DNA helicase RecG [Desulfotomaculum kuznetsovii DSM
6115]
Length = 690
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 173/510 (33%), Positives = 244/510 (47%), Gaps = 79/510 (15%)
Query: 220 RLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFS 279
R + L+ G T++ LL+HFPR Y Q Y GE ++ +G G
Sbjct: 20 RRFALLKRLGIRTVKDLLYHFPREY------QERTVKPSYACAHGEQVTLQGRVVG---- 69
Query: 280 FLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKV 339
+ + SG + + K+ FF F + I+
Sbjct: 70 ---------VTELSPRSGLWITRV------KVQEPTGHFF-AVWFNQ----RYIKKLFTA 109
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRD 399
G V V+GK+ R ++ + ++L+ E+ + PIYP L L+R
Sbjct: 110 GSRVQVTGKIE--RRFGEIQLLVADYELLEGEEPVPQEGI---VPIYPLTEQLTQRLMRS 164
Query: 400 TIARAL-QALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFY 458
+ AL + P D +P + Q+F L L A IH P EA ARKR IF+E F
Sbjct: 165 LMRLALDEWTPRINDFLPPGVRQKFFLPELPSALCQIHFPATEKEAIRARKRFIFEELFL 224
Query: 459 LQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLS 518
LQL + + + + KP + L + L +LP++LT Q
Sbjct: 225 LQLVLALRRRQ-----------ITRKLKPHRYHDH----EDLVGRFLSSLPFTLTPGQQR 269
Query: 519 AISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYE 578
A EI D+ P PMNRLLQGDVG GKTVV+ LA + +GSG Q A MVPTE+LA QH+
Sbjct: 270 AWEEIKADMDAPWPMNRLLQGDVGAGKTVVSTLALLRAVGSGLQGALMVPTEILAEQHHL 329
Query: 579 HLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSA 638
L + L ++ K+ LL+GS K+ + L G+I LV+GTH+LI EKV+F +
Sbjct: 330 TLSRSLASL-----GIKVGLLSGSMRKKERERLLAGLACGEIPLVVGTHALIQEKVQFKS 384
Query: 639 LRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPI 698
L L ++DEQ RFGV QR A++ G P VL M+ATPI
Sbjct: 385 LALVVIDEQHRFGVRQR----------------AILQYKGH-------CPDVLVMTATPI 421
Query: 699 PRTLALALYGDMSLTQITDLPPGRIPIKTY 728
PRTLAL LYGD+ ++ I++LPPGR P++TY
Sbjct: 422 PRTLALTLYGDLEVSTISELPPGRRPVQTY 451
>gi|289422304|ref|ZP_06424154.1| ATP-dependent DNA helicase RecG [Peptostreptococcus anaerobius
653-L]
gi|289157249|gb|EFD05864.1| ATP-dependent DNA helicase RecG [Peptostreptococcus anaerobius
653-L]
Length = 685
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 164/527 (31%), Positives = 245/527 (46%), Gaps = 90/527 (17%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFI 263
+L++ I + G+ + ++ G +T+ L +FPR + D + L+DG+
Sbjct: 4 VLNEKIQYIKGIGPKKADKMSKLGIFTIEDALFYFPRQFEDRSRVKKVFQLEDGEKVAIE 63
Query: 264 GEI--ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRG 321
+I ISSR ++ S E+ V D + K+ K + R
Sbjct: 64 VKIERISSRRVR---KLSITELFVK-----------------DDTKACKLVFFNKGYLRN 103
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
T +VG+ V V G V+ +R EM +N ++ D+ D + G
Sbjct: 104 T--------------FRVGDEVKVFGTVK-IRPTGIVEM--HNCEIEYDKLD---KNTGI 143
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G+ + I + + +P+ I ++ L + A +H P+
Sbjct: 144 IIPVYKLSNGVTNKDVMGMIRNIFEMPDIKIKEYLPQWIIDKYNLCDINFAIKSMHFPEK 203
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ +A RLIF+E +LQLG L R+ + +
Sbjct: 204 KENVKIAMFRLIFEELLFLQLG-----------------LFTIKGDNRIASGISQPVHKD 246
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
K + L + LT +Q A +I+ D++ MNRL+QGDVG GKT VA LA + +G
Sbjct: 247 LKAIENGLGFKLTRAQQRAYDDILRDMESGKVMNRLVQGDVGSGKTAVAQLALANTVLNG 306
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQ A+M PTE+LA QH+E L N ++ LLTGS K+S IR+ L+ G+I
Sbjct: 307 YQGAYMAPTEILANQHFESFLDFFKNT-----PIRVELLTGSVSKKRSEDIRERLKNGEI 361
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
++IGTH+LI +KVEF+ L L I DEQ RFGV QRGR +K
Sbjct: 362 DILIGTHALIEDKVEFNKLGLVITDEQHRFGVRQRGRLTAK------------------- 402
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
++P VL M+ATPIPRTLAL LYGDM ++ I +LPPGR I T
Sbjct: 403 ----ALSPDVLVMTATPIPRTLALILYGDMDISIIDELPPGRQKIDT 445
>gi|440226616|ref|YP_007333707.1| ATP-dependent DNA helicase RecG [Rhizobium tropici CIAT 899]
gi|440038127|gb|AGB71161.1| ATP-dependent DNA helicase RecG [Rhizobium tropici CIAT 899]
Length = 713
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 155/453 (34%), Positives = 227/453 (50%), Gaps = 84/453 (18%)
Query: 302 NIDSGQKKKIYLHLKK------FFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKV-----R 350
N S ++YLH + FFRG + +E + + E V VSGKV R
Sbjct: 96 NPRSNVPYRVYLHDETGELALVFFRGK-------AQWLEKQLPIDETVTVSGKVDWFNGR 148
Query: 351 AMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPA 410
+ Y MRE + ++L L P+YP GL LR TI AL +P
Sbjct: 149 PSMVHPDYIMRE------SEAENLPLVE-----PVYPLTAGLTPKFLRKTIEAALPRIPQ 197
Query: 411 --NFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL-----ARKRLIFDEFFYLQLGR 463
+D + +TQ+ G + DA+ +H P+ D AD+ AR+RL +DEF
Sbjct: 198 LPEWDDI--ALTQKQGFPSISDAFHMLHAPR--DAADIDPQAPARRRLAYDEF------- 246
Query: 464 LYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEI 523
L Q + + RK +A+ G ++ K+L +LP+S+T+SQ A+++I
Sbjct: 247 -------LAGQLSLSLVRQRLRKVAGQSAHATG--EISGKILESLPFSMTNSQRDAVADI 297
Query: 524 IWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKL 583
+ D+ M RLLQGDVG GKT+VA +A VI SG QA M PTE+LA QH+ + K
Sbjct: 298 LKDMAGTERMLRLLQGDVGAGKTLVALMAIAAVIESGGQAVLMAPTEILARQHFATISKF 357
Query: 584 LDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAI 643
N + +LTG T ++ I + + +G+ ++IGTH+L + V ++ L LA+
Sbjct: 358 AANA-----NLSVEVLTGRTKGRERDAILERIASGEAQIIIGTHALFQDSVAYANLMLAV 412
Query: 644 VDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLA 703
VDEQ RFGV QR R +K ++PH+L M+ATPIPRTL
Sbjct: 413 VDEQHRFGVHQRLRLTAK-----------------------GISPHMLVMTATPIPRTLV 449
Query: 704 LALYGDMSLTQITDLPPGRIPIKTYIIEGNEKG 736
LA +GDM ++++T+ P GR PI+T I G
Sbjct: 450 LAAFGDMDVSKLTEKPAGRKPIQTITIPNERTG 482
>gi|337750126|ref|YP_004644288.1| protein RecG [Paenibacillus mucilaginosus KNP414]
gi|379722963|ref|YP_005315094.1| protein RecG [Paenibacillus mucilaginosus 3016]
gi|336301315|gb|AEI44418.1| RecG [Paenibacillus mucilaginosus KNP414]
gi|378571635|gb|AFC31945.1| RecG [Paenibacillus mucilaginosus 3016]
Length = 683
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 134/356 (37%), Positives = 188/356 (52%), Gaps = 60/356 (16%)
Query: 384 PIYPSKGGLNASLLRDTIARAL----QALPANFDPVPKEITQEFGLLCLFDAYMGIHQPK 439
P+Y L R + +AL + +P + +P+E+ Q++GLL A +H P
Sbjct: 145 PVYSLTAALTQKWFRQAMKQALVQYGEMIP---EVLPQELLQKYGLLPRKQAVTLLHLPG 201
Query: 440 HIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSS 499
++++ AR+R++++E F QL + YR LN +G +
Sbjct: 202 NMEQGQRARRRMVYEELFLFQLK------------------MQAYRA--LNHERADGVAH 241
Query: 500 -----LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACM 554
+ +R+LP++LT SQ + ++EI+ DL+QP MNRLLQGDVG GKTVVA A
Sbjct: 242 PVDLPAVRAFVRSLPFTLTDSQKNVLAEILQDLQQPHCMNRLLQGDVGAGKTVVAASALF 301
Query: 555 EVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKD 614
V+ +GYQ A MVPTE+LA QH L +L + + + ALLTGS +Q R I
Sbjct: 302 AVVKAGYQGALMVPTEILAEQHKRSLDRLF-----EPYGIQTALLTGSLTDRQRREILAS 356
Query: 615 LQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMV 674
LQ G I +V+GTH+LI E V F L L + DEQ RFGV QR K
Sbjct: 357 LQMGMIDVVVGTHALIQEDVFFRRLGLVVTDEQHRFGVNQRSILRRK------------- 403
Query: 675 NSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
M P VL M+ATPIPRTLA+ +GDM ++ + +LP GR PIKTY +
Sbjct: 404 ----------GMNPDVLTMTATPIPRTLAITAFGDMDVSTLRELPKGRKPIKTYAV 449
>gi|229491419|ref|ZP_04385243.1| ATP-dependent DNA helicase RecG [Rhodococcus erythropolis SK121]
gi|453068814|ref|ZP_21972085.1| ATP-dependent DNA helicase RecG [Rhodococcus qingshengii BKS 20-40]
gi|229321704|gb|EEN87501.1| ATP-dependent DNA helicase RecG [Rhodococcus erythropolis SK121]
gi|452764997|gb|EME23262.1| ATP-dependent DNA helicase RecG [Rhodococcus qingshengii BKS 20-40]
Length = 753
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 156/524 (29%), Positives = 254/524 (48%), Gaps = 67/524 (12%)
Query: 232 TLRKLLHHFPRTYADL--QNAQIDLDDGQYFIFIGEIISSRGMK-AGCSFSFLEVIVGCE 288
T+ LL H+P YA + A+ + +G++ I + S+ +K L V + +
Sbjct: 28 TVEDLLRHYPHRYASAGKELAEKEPPEGEHITIIARVASAAVVKMKNRPGQMLRVSLATD 87
Query: 289 IADTETT--SGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIP-FLKSIEGKHKVGEFVCV 345
+ T + +V ++ + ++ K+FRG + P +L I + +VGE V
Sbjct: 88 SQTVDVTFFNPQKVRHVIKPGVRAMFSGTVKYFRGKWSLTHPSYL--ILPEPRVGEEDSV 145
Query: 346 --------SGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLL 397
+G + + N E ++ V D +L P+YP+ + + +
Sbjct: 146 VPLASIKGAGDLAGLARANQDPGAELDLSVF----DRAL------IPLYPATREVESWTI 195
Query: 398 RDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFF 457
+ + L L +P+P E E G + L +A +H P ++ + A+ RL FDE
Sbjct: 196 MRCVRQVLDQLDPIEEPLPAETRAEHGFIGLDEALRTVHLPDTKEDIERAQDRLRFDEAL 255
Query: 458 YLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQL 517
LQL + M ++ R+ A + + LP++LT Q
Sbjct: 256 SLQL--VLAMRRHDNSE-------------RVAPACAPVAGGIADQFEEMLPFTLTEGQQ 300
Query: 518 SAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHY 577
+ EI DL +P PM+RLLQG+VG GKT+VA A ++V+ +GYQ A + PTE+LA QH
Sbjct: 301 AVAEEISTDLARPHPMSRLLQGEVGSGKTIVALRAMLQVVDAGYQCALLAPTEVLANQHA 360
Query: 578 EHLLKLLDNME------EDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIA 631
L K++ ++ +H +IALLTGS PV R + TGD +VIGTH+LI
Sbjct: 361 RSLRKMMGSLAAGGELGSAEHSTRIALLTGSLPVAAKRAALLEAVTGDAGIVIGTHALIQ 420
Query: 632 EKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVL 691
+ VEF L + +VDEQ RFGV QR + S+ + ++PH+L
Sbjct: 421 DNVEFFNLGMVVVDEQHRFGVEQRDQLRSRAR--------------------EGLSPHLL 460
Query: 692 AMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
M+ATPIPRT+A+ + GD+ ++ + +LP GR PIK+ ++ +K
Sbjct: 461 VMTATPIPRTIAMTVLGDLEVSTLRELPRGRTPIKSSVVPAKQK 504
>gi|117928787|ref|YP_873338.1| ATP-dependent DNA helicase RecG [Acidothermus cellulolyticus 11B]
gi|117649250|gb|ABK53352.1| ATP-dependent DNA helicase RecG [Acidothermus cellulolyticus 11B]
Length = 741
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 161/539 (29%), Positives = 251/539 (46%), Gaps = 101/539 (18%)
Query: 217 LSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI----DLDDGQYFIFIGEIISSRGM 272
L R L G T+ LL +FPR Y Q ++ +L D ++ EI+S R
Sbjct: 15 LGGRTAAALARLGLDTVGDLLTYFPRRYH--QRGELTPLRELRDDEHATIFAEILSVRER 72
Query: 273 KAGCSFSFLEVIVGCEIADTETTSGDEVV-----NIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ +V+V T GDE + N+ + Q +K+ + + FF G
Sbjct: 73 RLSGHRRMYDVVV---------TDGDEKLKLRFFNLTNWQLEKLAVGGRGFFSG------ 117
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYP 387
KV F + R H EM E+ V D D A P+YP
Sbjct: 118 ----------KVTRF-------KGERQIVHPEM-EF---VDPDTDPAFASAI---IPVYP 153
Query: 388 SKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA 447
+ +++ ++ + L L + DP+P +I + L+ L A +H+P + +
Sbjct: 154 AAEHISSGMIWRAVRHVLDTLDISEDPLPADIRRRHNLVTLRRALENMHRPADLADVATG 213
Query: 448 RKRLIFDEFFYLQLG-----RLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
R+R F E F QL R+ Q + + + GLLD +
Sbjct: 214 RRRFTFQEAFVFQLALGLRRRMMQAEQAVPRPRRRGGLLDAFDA---------------- 257
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
ALP++LT Q A ++I DL P PM+RLL G+VG GKT+VA A + V+ +G Q
Sbjct: 258 ----ALPFALTEGQRRAGADIEADLAAPHPMHRLLHGEVGSGKTLVALRAMLTVVDAGGQ 313
Query: 563 AAFMVPTELLATQHYEHLLKLLDNME------EDKHKPKIALLTGSTPVKQSRMIRKDLQ 616
AA + PTE+LA QHY+ + +LL ++ + ++AL+TGS R + +
Sbjct: 314 AALLAPTEVLAMQHYQTITRLLGSLALAGQLGGAETATRVALITGSVTGGARRELLDAIA 373
Query: 617 TGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNS 676
G++ +V+GTH+L+ + V F+ L L +VDEQ RFGV QR +K S
Sbjct: 374 AGEVGIVVGTHALLYDTVRFADLGLVVVDEQHRFGVEQRAALRTK-------------GS 420
Query: 677 DGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
DG+ PHVL M+ATPIPRT+AL +YGD+ ++ + + P G + T+++ +EK
Sbjct: 421 DGT-------VPHVLVMTATPIPRTVALTVYGDLDISVLRERPSGDPKVDTFVVPLSEK 472
>gi|342217180|ref|ZP_08709827.1| ATP-dependent DNA helicase RecG [Peptoniphilus sp. oral taxon 375
str. F0436]
gi|341588070|gb|EGS31470.1| ATP-dependent DNA helicase RecG [Peptoniphilus sp. oral taxon 375
str. F0436]
Length = 640
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 167/494 (33%), Positives = 235/494 (47%), Gaps = 91/494 (18%)
Query: 237 LHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTS 296
+++FPR Y DL Q+ DGQ +GE I R ++A +S + + D E T
Sbjct: 1 MYYFPRDYEDLSRPQL-FQDGQ----LGERILVR-VEARSKYSVNRQMWKLMVVDQEQTQ 54
Query: 297 GDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNN 356
E+ G YL + K GT++ LK G+++ M +
Sbjct: 55 A-EIAFFSQG-----YL-MGKIKEGTKYYLYGDLKVFRGRYQ-------------MANPR 94
Query: 357 HYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVP 416
Y + E+ + +G PIYP + GL I R L L + +P
Sbjct: 95 VYSLWEFK------------KVQG-IRPIYPQQKGLKQFEFEQLIQRVLPELHDLDEVIP 141
Query: 417 KEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFE 476
K + ++ LL + IHQP + A+KR++F+EFF LQL Y+ G
Sbjct: 142 KPVRLKYSLLSRASSLKEIHQPTSYERLLEAKKRMVFEEFFILQLSVFYRQ----GYDTS 197
Query: 477 KEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRL 536
+EGL P + ME K+L+ +P+ LT Q ++SEII L M RL
Sbjct: 198 QEGL------P-MKKIDME-------KILKEIPFPLTPGQDRSLSEIIGSLTDGRAMRRL 243
Query: 537 LQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKP-- 594
LQGDVG GKT+VA +A I +GYQ A M PTE+LA+QHY+ L D KP
Sbjct: 244 LQGDVGSGKTMVAMVAMAFCIENGYQCAMMAPTEILASQHYQSAL--------DFFKPFS 295
Query: 595 -KIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVV 653
++ALLTG T K + +DL+ G I +++GTH+LI + V F L L I DEQ RFGV
Sbjct: 296 YRVALLTGKTKAKDREEMLEDLKAGKIDILLGTHALIQDDVIFKKLGLVITDEQHRFGVS 355
Query: 654 QRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLT 713
QR + K A H L M+ATPIPRT A+A YGD+ ++
Sbjct: 356 QREKLLEKA-----------------------KAVHSLVMTATPIPRTYAMASYGDLDVS 392
Query: 714 QITDLPPGRIPIKT 727
I +PPGR P++T
Sbjct: 393 FIDTMPPGRKPVQT 406
>gi|326315383|ref|YP_004233055.1| ATP-dependent DNA helicase RecG [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323372219|gb|ADX44488.1| ATP-dependent DNA helicase RecG [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 708
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/370 (36%), Positives = 196/370 (52%), Gaps = 49/370 (13%)
Query: 384 PIYPSKGGLNASLLRDTIARALQ------ALPANFDP-VPKEITQEFG---LLCLFDAYM 433
P+YP+ GL LR + ALQ +P +P +P+ + + G L DA +
Sbjct: 134 PVYPTTAGLPQPYLRRAVVGALQRVDLSETIPPGLEPPIPRFLGEGGGGRSWWTLRDALV 193
Query: 434 GIHQPKH-------IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRK 486
+H P D + A +RL +E QL +Q E + D+ R
Sbjct: 194 FLHHPTPDVALATLEDHSHPAWQRLKAEELLAQQL-----------SQLEAKRERDRLRA 242
Query: 487 PRLNAAYME-GWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGK 545
P L E G +L ++LL ALP+ LT++Q +EI DL +PVPM+RLLQGDVG GK
Sbjct: 243 PVLRPVPGEQGGPALHERLLAALPFGLTAAQQRVCAEIAADLARPVPMHRLLQGDVGSGK 302
Query: 546 TVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPV 605
TVVA L+ + +G+Q A M PTE+LA QH+ L+ L+ + + ++A L G
Sbjct: 303 TVVAALSAAVCMDAGWQCALMAPTEILAEQHFRKLIGWLEPLLAASGR-RVAWLAGGQKK 361
Query: 606 KQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYT 665
K+ + +++G+ LV+GTH++I ++V F L LA++DEQ RFGV QR KL
Sbjct: 362 KERAAMLALVESGEAALVVGTHAVIQDQVRFRNLALAVIDEQHRFGVAQRLALRRKLA-- 419
Query: 666 SMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
DQ M PH+L MSATPIPRTLA++ Y D+ ++ I +LPPGR PI
Sbjct: 420 -----------------DQGMEPHLLMMSATPIPRTLAMSYYADLDVSTIDELPPGRTPI 462
Query: 726 KTYIIEGNEK 735
T +I + K
Sbjct: 463 VTKLIADSRK 472
>gi|347536685|ref|YP_004844110.1| ATP-dependent DNA helicase RecG [Flavobacterium branchiophilum
FL-15]
gi|345529843|emb|CCB69873.1| ATP-dependent DNA helicase RecG [Flavobacterium branchiophilum
FL-15]
Length = 701
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 146/410 (35%), Positives = 214/410 (52%), Gaps = 64/410 (15%)
Query: 330 LKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSK 389
+K I+ K+ E V GK+ + N H+ M ++++ E SLR+ + IYPS
Sbjct: 102 IKWIKDSIKLNEMYVVFGKI--TKFNQHFSMSHPEMELM-TEHQKSLRSAMQA--IYPST 156
Query: 390 GGL-NASLLRDTIARALQALPANF-----DPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
L N + I + ++ L + +P + +E L+ +A IH PK D
Sbjct: 157 ESLQNRGVTNKVIGKMMEQLWIETQHYFTEHLPLYLIEELQLMSKKEAIFNIHFPK--DA 214
Query: 444 ADLARK--RLIFDEFFYLQL----GRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGW 497
LA+ RL F+E F++QL L Q + G F + GL N Y
Sbjct: 215 YSLAKSQFRLKFEELFFIQLQLITKNLIQKYKIKGHSFTQVGLY-------FNEFYKN-- 265
Query: 498 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
LP+ LT++Q I EI D+ MNRLLQGDVG GKT+VAF++ + +
Sbjct: 266 ---------HLPFDLTNAQKRVIKEIRNDMGSHAQMNRLLQGDVGSGKTIVAFMSMLLAL 316
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
+G+QA M PTE+LA QH+ L +L M+ +I +LTGST +K+ R I + L+
Sbjct: 317 DNGFQACLMAPTEILANQHFVGLSELALKMD-----IRIKILTGSTKIKERRQIHESLED 371
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
G + ++IGTH+L+ +KV F L LAI+DEQ RFGV QR + K
Sbjct: 372 GTLQIIIGTHALLEDKVVFKNLGLAIIDEQHRFGVEQRSKLWKK---------------- 415
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
++ PH+L M+ATPIPRTLA++LYGD+ ++ I +LPPGR PI+T
Sbjct: 416 ------NNIPPHILVMTATPIPRTLAMSLYGDLDVSVIDELPPGRKPIQT 459
>gi|389575655|ref|ZP_10165683.1| ATP-dependent DNA helicase RecG [Eubacterium cellulosolvens 6]
gi|389311140|gb|EIM56073.1| ATP-dependent DNA helicase RecG [Eubacterium cellulosolvens 6]
Length = 694
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 160/523 (30%), Positives = 238/523 (45%), Gaps = 92/523 (17%)
Query: 216 GLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAG 275
G+ ++ G LR L+ ++PR Y D + + +G ++
Sbjct: 16 GIGQKTEEAFHRAGIMNLRDLIRYYPREY----------DSFEEPVPVGRCVADIKNAVV 65
Query: 276 CSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEG 335
+ V+ T G + + I + Q + L + F +PFL++
Sbjct: 66 AKVTSRPVV---------RTFGKKSITILNLQDETGTLQVNWF-------HMPFLRNT-- 107
Query: 336 KHKVGEFVCVSGKVRA------MRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSK 389
K+G + G V A M Y EY ++ G+ PIYP
Sbjct: 108 -IKIGVYYVFRGPVIAKGGRKIMEHPQLYTREEY------------MKLTGQMLPIYPLT 154
Query: 390 GGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARK 449
GL +++R + + L+ + +P + +E GL + A IH P++ + +AR
Sbjct: 155 AGLTNNMVRKAVTQLLEMQRTEEEILPDTVREEEGLCEINFARSQIHFPENSENLLIARN 214
Query: 450 RLIFDEFFYLQLG--RLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRA 507
RL F+EFF LG RL + + F E W T+ ++ +
Sbjct: 215 RLAFEEFFLFLLGVERLRAINDTTENHF----------------PMREVWE--TEDVIAS 256
Query: 508 LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMV 567
LPY LT +Q + EI DL MNRL+QGDVG GKT++AFLA + +G+Q+A MV
Sbjct: 257 LPYKLTGAQQAVWGEIEKDLASKRLMNRLVQGDVGSGKTILAFLAMIMAYENGFQSALMV 316
Query: 568 PTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTH 627
PTE+LA QHY+ +LL+ P LL GS K+ R I + + +G +IGTH
Sbjct: 317 PTEVLAVQHYQAFTELLEKNGITDLCP--VLLRGSCTAKEKREIYEQISSGKTRAIIGTH 374
Query: 628 SLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMA 687
+LI EKVE+ L L I DEQ RFGV QR K Y
Sbjct: 375 ALIQEKVEYEKLGLVITDEQHRFGVKQREALAGKGY-----------------------P 411
Query: 688 PHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
P+VL MSATPIPRTLA+ LYGD+ ++ + D+P R+PIK ++
Sbjct: 412 PNVLVMSATPIPRTLAMILYGDLDISILNDMPAHRLPIKNCVV 454
>gi|300361942|ref|ZP_07058119.1| DNA helicase RecG [Lactobacillus gasseri JV-V03]
gi|300354561|gb|EFJ70432.1| DNA helicase RecG [Lactobacillus gasseri JV-V03]
Length = 679
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 169/523 (32%), Positives = 258/523 (49%), Gaps = 99/523 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGEIIS- 268
++ + G+ + L G T+ LL +FP Y DL+ +D ++DGQ + G +++
Sbjct: 12 VTELKGVGAKTATALAGLGINTIYDLLFYFPFRYDDLETIPLDQIEDGQKVLLKGIVVTD 71
Query: 269 ---SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFT 325
SR SF ++ + +I +VN F
Sbjct: 72 PFVSRFGYRKTRLSF-KMKIDHDII---------MVN---------------------FF 100
Query: 326 SIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPI 385
+ P+LK K + G+ V V GK + R + + + + K + + PI
Sbjct: 101 NQPWLKD---KVESGKEVAVYGKYQVGRQS----LSGFKLVAEKKDSGFA--------PI 145
Query: 386 YPSKGGLNASLLRDTIARALQ-ALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
Y L + L+ I AL+ LP + +P + +++ LL +H PK+ +EA
Sbjct: 146 YSVNRHLKQNKLQKLIDLALEEVLPEVGETIPAVLREKYRLLSDQTLVEKMHHPKNGNEA 205
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKE--GLLDKYRKPRLNAAYMEGWSSLTK 502
+AR+ IF EFF Q+ +L Q+L +Q +++ G+ +Y + K
Sbjct: 206 KIARRSAIFREFFLFQV-QLAQLL----SQRDEDVPGIEKRYD------------LAAVK 248
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
+L++A+P+ L+ Q ++EI DL P M RLLQGDVG GKTVVA A I +G+Q
Sbjct: 249 ELIQAIPFELSDDQKKVVNEIFADLHSPRQMRRLLQGDVGSGKTVVAVFAIYAAITAGFQ 308
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
AA MVPTE+LA QH+ + +LL + ++ALLTG T + + I ++L G I +
Sbjct: 309 AALMVPTEILAQQHFTKVDELLRPL-----GVRVALLTGDTKELEKKEIYRELADGTINV 363
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
VIGTH+LI + V F L L I+DEQ RFGV QR T + G
Sbjct: 364 VIGTHALIQKDVHFKNLGLVIIDEQHRFGVNQRN--------TLIKKG------------ 403
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
+AP VLAM+ATPIPRTLAL +YGDM++++I LP GR P+
Sbjct: 404 ---VAPDVLAMTATPIPRTLALTVYGDMAVSEIRHLPKGRKPV 443
>gi|347750534|ref|YP_004858099.1| ATP-dependent DNA helicase RecG [Bacillus coagulans 36D1]
gi|347583052|gb|AEO99318.1| ATP-dependent DNA helicase RecG [Bacillus coagulans 36D1]
Length = 682
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 165/532 (31%), Positives = 245/532 (46%), Gaps = 91/532 (17%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
LD+ +S + G+ + L G +T+ LL +FP Y D + DL + ++
Sbjct: 5 LDQPVSVLKGIGEETEASLGQMGIFTIYDLLTYFPFRYED--DRLKDLREVRH------- 55
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
R G S +I KK+ L +K F T
Sbjct: 56 -DERVTVTGRVHSEPSLIYYS--------------------KKRSRLSMKVFAGDFLITV 94
Query: 327 I----PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
+ P+LK K V + + V+GK ++M I + + + G
Sbjct: 95 VCFNQPYLKK---KIHVHDVITVTGK---------WDMHRQTITAQSVKTGTADQTSGFG 142
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANFD-PVPKEITQEFGLLCLFDAYMGIHQPKHI 441
P+Y KG + LR I A A + + +P E+ ++ L+ A +H PK
Sbjct: 143 -PVYAVKGKMTVKTLRKYIQSAFHAYGSEIEEALPAEMLAKYKLMPKKQAMYAMHFPKSE 201
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
E +AR+ ++++EF QL K L K+ + N +
Sbjct: 202 QEVKMARRTIVYEEFLAFQL---------------KMQALRKFEREHSNGRAIRYDVRKL 246
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
+ + +LP+SLT++Q ++EI DLK P MNRLLQGDVG GKTVVA +A + +G+
Sbjct: 247 RHFIGSLPFSLTAAQKRVVNEICADLKSPFRMNRLLQGDVGSGKTVVAAIALYAAVTAGF 306
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q A MVPTE+LA QH E L +LL + H ++ALLT + K+ + + + L TG I
Sbjct: 307 QGALMVPTEILAEQHAESLCQLL-----EPHGVQVALLTSTVKGKRRKALLEQLGTGGID 361
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
++IGTH+LI E V FS L L I DEQ RFGV QR K
Sbjct: 362 ILIGTHALIQEDVAFSRLGLVITDEQHRFGVEQRRILREK-------------------- 401
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN 733
M P VL M+ATPIPRTLA+ ++G+M ++ I +P GR I+TY ++ N
Sbjct: 402 ---GMNPDVLFMTATPIPRTLAITVFGEMDVSVIDQMPAGRKKIETYWVKNN 450
>gi|372210295|ref|ZP_09498097.1| ATP-dependent DNA helicase RecG [Flavobacteriaceae bacterium S85]
Length = 699
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 165/515 (32%), Positives = 253/515 (49%), Gaps = 94/515 (18%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIV 285
+ G ++ +LL+ FP Y +D Q+F I E++ + V+V
Sbjct: 24 KEMGIFSANQLLNFFPHRY---------VDKSQFFK-IRELVPN-----ASEVQIKGVVV 68
Query: 286 GCEIADTETTSGDEVVNI---DSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEF 342
G I + + G +V D+G + I+ FR T++ ++ K+ E
Sbjct: 69 G--IKEVQQKRGSRLVATFKDDTGTLELIW------FRATKW--------LKSSIKINEP 112
Query: 343 VCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNAS-LLRDTI 401
+ GK+ N + M ++ L++ SL + +YPS ++A I
Sbjct: 113 YVIYGKLNFF--NGSFSMPHPEME-LEEHYKKSLTTGLQA--LYPSTEKMSAKGFNHKVI 167
Query: 402 ARALQ-----ALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEF 456
++AL+ A P + + E+ +E L+ +A + IH PK + A+KRL F+EF
Sbjct: 168 SKALEHLLKEAFPYIHETLSPEVLKELDLMSKKEALLNIHFPKSHELLAKAQKRLKFEEF 227
Query: 457 FYLQL----GRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSL 512
FY+Q+ +L + + G FE G+ N+ Y G L + L
Sbjct: 228 FYIQMQLIRNKLIRKDKIKGYVFEHIGMY-------FNSFYQSG-----------LKFDL 269
Query: 513 TSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELL 572
T +Q + EI D+ MNRLLQGDVG GKT+VA L + + +G+Q A + PTE+L
Sbjct: 270 TGAQKRVLKEIRADMATGAHMNRLLQGDVGAGKTIVALLTMLIALDNGFQTALLAPTEIL 329
Query: 573 ATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAE 632
ATQHY+ + +LL + LLTGST K R I K L+ G + ++IGTH+++ +
Sbjct: 330 ATQHYQAITELLQGF-----GVTVQLLTGSTKTKVRREIHKTLEEGSLQILIGTHAILED 384
Query: 633 KVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLA 692
KV F L LAI+DEQ RFGV QR S M M NS + PH+L
Sbjct: 385 KVVFKNLGLAIIDEQHRFGVAQR-------------SKMWMKNS---------LPPHILI 422
Query: 693 MSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
M+ATPIPRTLA++ YGD+ ++ I +LPPGR P++T
Sbjct: 423 MTATPIPRTLAMSAYGDLDVSVIDELPPGRKPVQT 457
>gi|239616417|ref|YP_002939739.1| ATP-dependent DNA helicase RecG [Kosmotoga olearia TBF 19.5.1]
gi|239505248|gb|ACR78735.1| ATP-dependent DNA helicase RecG [Kosmotoga olearia TBF 19.5.1]
Length = 787
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 132/359 (36%), Positives = 199/359 (55%), Gaps = 43/359 (11%)
Query: 372 DDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDA 431
++++ R P+Y G++ ++R + + + + + +P E+ +E LL A
Sbjct: 236 EEITGRVPREILPLYSLSAGISQKVMRKIVRKNITNVRLLKEFIPAEVIKERNLLPRHHA 295
Query: 432 YMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNA 491
+H PK + E +R+RL ++E F ++ LY E L T K G+ +
Sbjct: 296 MYTVHFPKSLYELKESRRRLAYEELFLFEVAVLYNR-EKLKTT--KGGI----------S 342
Query: 492 AYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFL 551
+ G L ++ + +L + LT Q+ A EI D+K P PMNRLLQGDVG GKTVVA L
Sbjct: 343 KSISG--KLAERFIDSLNFVLTGDQMRAFEEIREDMKAPTPMNRLLQGDVGSGKTVVAEL 400
Query: 552 ACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMI 611
A ++ +GYQ+A MVPT +LATQ ++ L+K L+ + K+ LL GS Q I
Sbjct: 401 AIIDNFEAGYQSAMMVPTTVLATQQHQKLVKDLEPL-----GIKVELLVGSQKKSQQEEI 455
Query: 612 RKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGM 671
+K + G++ +V+GTH+LI E V+F L L I+DEQ RFGV QR M+ G
Sbjct: 456 KKRIAIGEVDVVVGTHALIQENVKFKDLGLVIIDEQHRFGVKQREAL--------MNKG- 506
Query: 672 AMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
A+V++ L M+ATPIPRTLAL YGD+ ++ IT++PPGR PI+T +I
Sbjct: 507 ALVDT--------------LVMTATPIPRTLALTAYGDLDISTITEMPPGRAPIRTMLI 551
>gi|386725747|ref|YP_006192073.1| protein RecG [Paenibacillus mucilaginosus K02]
gi|384092872|gb|AFH64308.1| protein RecG [Paenibacillus mucilaginosus K02]
Length = 683
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 134/356 (37%), Positives = 189/356 (53%), Gaps = 60/356 (16%)
Query: 384 PIYPSKGGLNASLLRDTIARAL----QALPANFDPVPKEITQEFGLLCLFDAYMGIHQPK 439
P+Y L R + +AL + +P + +P+E+ Q++GLL A +H P
Sbjct: 145 PVYSLTAALTQKWFRQAMKQALVQYGEMIP---EVLPQELLQKYGLLPRKQAVTLLHLPG 201
Query: 440 HIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSS 499
++++ AR+R++++E F QL + YR LN +G +
Sbjct: 202 NMEQGQRARRRMVYEELFLFQLK------------------MQAYRA--LNHERADGVAH 241
Query: 500 -----LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACM 554
+ +R+LP++LT SQ + ++EI+ DL+QP MNRLLQGDVG GKTVVA A
Sbjct: 242 PVDLPAVRAFVRSLPFTLTDSQKNVLAEILQDLQQPHCMNRLLQGDVGAGKTVVAASALF 301
Query: 555 EVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKD 614
V+ +GYQ A MVPTE+LA QH L +L+ + + + ALLTGS +Q R I
Sbjct: 302 AVVKAGYQGALMVPTEILAEQHKRSLDRLV-----EPYGNQNALLTGSLTDRQRREILAS 356
Query: 615 LQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMV 674
LQ G I +V+GTH+LI E V F L L + DEQ RFGV QR K
Sbjct: 357 LQMGMIDVVVGTHALIQEDVFFRRLGLVVTDEQHRFGVNQRSILRRK------------- 403
Query: 675 NSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
M P VL M+ATPIPRTLA+ +GDM ++ + +LP GR PIKTY +
Sbjct: 404 ----------GMNPDVLTMTATPIPRTLAITAFGDMDVSTLRELPKGRKPIKTYAV 449
>gi|350269758|ref|YP_004881066.1| ATP-dependent DNA helicase RecG [Oscillibacter valericigenes
Sjm18-20]
gi|348594600|dbj|BAK98560.1| ATP-dependent DNA helicase RecG [Oscillibacter valericigenes
Sjm18-20]
Length = 682
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 172/533 (32%), Positives = 241/533 (45%), Gaps = 100/533 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFIGEIIS 268
+ + G+ + LE G TLR L+ +FPR Y D + +DL G+
Sbjct: 8 VQFIRGIGGQRAKALEKLGIRTLRDLISYFPRAYDDRTQIKHILDLQPGE---------- 57
Query: 269 SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNI----DSGQKKKIYLHLKKFFRGTRF 324
C +E +V + G E+V + DSG F
Sbjct: 58 -----TAC----VEAMVTAPPTLSRVRKGLELVKLRAVDDSGALD------------VTF 96
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ +LKS K GE G RA + +M ++ L + GR P
Sbjct: 97 FNQAWLKS---SLKAGETYIFYG--RAEGNLLRRQMTNPVVEPLGRGEQ-----TGRIVP 146
Query: 385 IYPSKGGLNASLLRDTIARALQA----LPANFDPVPKEITQEFGLLCLFDAYMGIHQPKH 440
+YP G++ +L +I + L A LP D +P + Q L + AY IH P
Sbjct: 147 VYPLTAGVSQLILSRSIRQGLDACQDILP---DVLPDAVRQGHQLCRIGFAYENIHFPAS 203
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ DLAR+RL F+E F +G L L ++ D+ R P M + S+
Sbjct: 204 AEALDLARRRLAFEELFLFTIG-----LRSLRSR------RDEIRTPPFREVDMAAFYSV 252
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
LP++LT++Q + E + D++ PMNRL QGDVG GKT+VA + +G
Sbjct: 253 -------LPFTLTAAQRRCVEEALGDMRSGKPMNRLCQGDVGSGKTMVAAACVYFCVKNG 305
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
QAA M PTE+LA QHY+ L +++ + ALLTGS K R I L G+I
Sbjct: 306 RQAALMAPTEILARQHYDGLAPMMEKL-----GVSCALLTGSMSAKTKRTISGQLAAGEI 360
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+IGTH+LI+ VE+ L L + DEQ RFGV QR SK
Sbjct: 361 DFIIGTHALISGSVEYQDLGLVVTDEQHRFGVGQRAALASK------------------- 401
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN 733
+PH+L MSATPIPRTLAL LYGD+ ++ I +LPPGR I T + G
Sbjct: 402 ----GNSPHMLVMSATPIPRTLALILYGDLDVSIIDELPPGRQQIGTSAVSGG 450
>gi|167765566|ref|ZP_02437630.1| hypothetical protein CLOSS21_00060 [Clostridium sp. SS2/1]
gi|167712751|gb|EDS23330.1| ATP-dependent DNA helicase RecG [Clostridium sp. SS2/1]
gi|291559032|emb|CBL37832.1| ATP-dependent DNA helicase RecG [butyrate-producing bacterium
SSC/2]
Length = 676
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/347 (36%), Positives = 189/347 (54%), Gaps = 44/347 (12%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
P+YP GL L+ +A+ + + +P+ I ++ + A IH P+ ++
Sbjct: 145 PVYPLTSGLTNKLVSKAMAQTKDYIFHIPEYLPQNILDQYQPMEYHQAIWNIHFPESKEQ 204
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
A+KRLIFDEFF + ++ + G ++EG Y G K+
Sbjct: 205 LIKAKKRLIFDEFFIF-IAAMHMITSG--EDLKEEG-------------YKIGVCKEAKE 248
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
L++ LPY LT++Q A++E+ D+ MNRL+QGDVG GKT++A + + +GYQ
Sbjct: 249 LVKNLPYELTTAQKRALNEMAKDMASGKVMNRLVQGDVGSGKTILAVILLLMCAKAGYQG 308
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
M PTE+LA QHYE +LL++ + KIALLTGST K+ R + ++ G++ +V
Sbjct: 309 VLMAPTEVLAAQHYESFTELLES-----YDIKIALLTGSTKAKEKRETYQKIKDGEVDIV 363
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
IGTH++I +KVE++ L L I DEQ RFGV QR + K
Sbjct: 364 IGTHAVIQDKVEYNKLALVITDEQHRFGVRQRESLSLK---------------------- 401
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
PHVL MSATPIPRTLA+ LYGD+ ++ I +LP R+PIK ++
Sbjct: 402 -GEKPHVLVMSATPIPRTLAIILYGDLDVSIIDELPAERLPIKNCVV 447
>gi|120436677|ref|YP_862363.1| ATP-dependent DNA helicase RecG [Gramella forsetii KT0803]
gi|117578827|emb|CAL67296.1| ATP-dependent DNA helicase RecG [Gramella forsetii KT0803]
Length = 699
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 144/434 (33%), Positives = 220/434 (50%), Gaps = 71/434 (16%)
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMRE----------------YNID 366
+ T + ++ GK V +F+ +GK+ + H +RE YN
Sbjct: 68 KITHLKMVEQKRGKRLVADFIDDTGKMELIWFRGHKWIRENLKLNTPYVIFGKTNSYNGA 127
Query: 367 VLKDEDDLSLRA----KGRP--YPIYPS-----KGGLNASLLRDTIARALQALPANF-DP 414
++ L A RP PIYPS K G+ ++ + LQ F +
Sbjct: 128 FSMPHPEMELVADYKKNLRPAMQPIYPSTEMLGKKGITNRVIMKLMQEVLQQTGLKFSES 187
Query: 415 VPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQ 474
+ ++ E L+ +A IH PK+ + A+ RL F+E F++QL Q
Sbjct: 188 LNADLIDELKLISKAEALFNIHFPKNQELLAKAQFRLKFEELFFIQL------------Q 235
Query: 475 FEKEGLLDKYRKPRLNAAYM-EGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPM 533
++ +L K + N + E +++ ++ LP+ LT +Q I EI D+ M
Sbjct: 236 LLRKNMLHKQKIKGFNFDQIGEYFNNFYQE---HLPFDLTGAQKRVIKEIRADMGSGAQM 292
Query: 534 NRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHK 593
NRLLQGDVG GKT+VA ++ + + +G+QA M PTE+L+ QHY L +L ++ +
Sbjct: 293 NRLLQGDVGSGKTIVALMSMLIALDNGFQACLMAPTEILSIQHYHGLAELCKDLNIE--- 349
Query: 594 PKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVV 653
I LLTGST + R I + L+ G+I ++IGTH+L+ +KV+F L LA++DEQ RFGV
Sbjct: 350 --IFLLTGSTKTAKRREIHEKLENGEIDILIGTHALLEDKVKFKNLGLAVIDEQHRFGVA 407
Query: 654 QRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLT 713
QR + K H+ PHVL M+ATPIPRTLA++LYGD+ ++
Sbjct: 408 QRAKLWKK----------------------NHIPPHVLVMTATPIPRTLAMSLYGDLDIS 445
Query: 714 QITDLPPGRIPIKT 727
I +LPPGR P+KT
Sbjct: 446 VIDELPPGRKPVKT 459
>gi|423682131|ref|ZP_17656970.1| ATP-dependent DNA helicase RecG [Bacillus licheniformis WX-02]
gi|383438905|gb|EID46680.1| ATP-dependent DNA helicase RecG [Bacillus licheniformis WX-02]
Length = 682
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 164/552 (29%), Positives = 256/552 (46%), Gaps = 123/552 (22%)
Query: 203 IEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIF 262
+E L IS + G+ L G YT+ LL++FP Y D
Sbjct: 1 MEHNLQLSISVIKGVGTETEKTLNELGIYTVLDLLNYFPYRYDD---------------- 44
Query: 263 IGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSG----------QKKKIY 312
E+ D E + DE V ++ KK+
Sbjct: 45 ------------------------YELRDLEDVAHDERVTVEGKVHSEPSLAYYGKKRSR 80
Query: 313 LHLKKFFRGTRFTSI----PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVL 368
L + T++ P+LK K +G V V+GK R + + L
Sbjct: 81 LTFRLLVGNYLITAVCFNRPYLKK---KLAIGSIVTVTGKWDKHRQS-------VMVQEL 130
Query: 369 KD---EDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQA-LPANFDPVPKEITQEFG 424
K+ + D S+ P+Y K + +R I A+++ LP DP+P+++ +
Sbjct: 131 KNGPHQGDQSIE------PVYSVKENITVKTMRKLIQEAVRSHLPFAEDPLPEKLRTAYK 184
Query: 425 LLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKE---GLL 481
LL +A +H+P+ + AR+R +++EF QL ++ L +FE+E G+
Sbjct: 185 LLSYQEAVKAMHKPESREALKHARRRFVYEEFLLFQLK-----MQAL-RKFEREASDGIS 238
Query: 482 DKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDV 541
+R +N+ +++LP+ LT++Q A+ +I+ D+ MNRLLQGDV
Sbjct: 239 HTFRLEDVNS------------FVKSLPFPLTNAQAKALDDILRDMASGYKMNRLLQGDV 286
Query: 542 GCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTG 601
G GKT VA +A + SG+Q A MVPTE+LA QH + L+ L ++H +ALLT
Sbjct: 287 GSGKTAVAAIALYASLLSGFQGAMMVPTEILAEQHADSLVSLF-----EQHDVNVALLTS 341
Query: 602 STPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSK 661
S K+ R + L+ G+I +++GTH+LI + V F L L I DEQ RFGV QR + SK
Sbjct: 342 SVKGKRRRELLDRLKEGEIDILVGTHALIQDDVHFKQLGLVITDEQHRFGVEQRKKLRSK 401
Query: 662 LYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPG 721
KD P VL M+ATPIPRTLA+ ++G+M ++ I ++P G
Sbjct: 402 ------------------GKD-----PDVLFMTATPIPRTLAITVFGEMDVSVIDEMPAG 438
Query: 722 RIPIKTYIIEGN 733
R I+TY ++ +
Sbjct: 439 RKRIETYWVKHD 450
>gi|340622209|ref|YP_004740661.1| ATP-dependent DNA helicase recG [Capnocytophaga canimorsus Cc5]
gi|339902475|gb|AEK23554.1| ATP-dependent DNA helicase recG [Capnocytophaga canimorsus Cc5]
Length = 701
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 157/520 (30%), Positives = 248/520 (47%), Gaps = 108/520 (20%)
Query: 228 CGFYTLRKLLHHFPRTYAD---------LQNAQIDLDDGQYFIFIGEIISSRGMKAGCSF 278
G + + LL+ FP Y D LQN ++ +G+II + + +G +
Sbjct: 28 LGIHQFQDLLNLFPNRYIDRTRFYKISELQNNSAEVQ------IVGKIIHLKTVSSGNNN 81
Query: 279 SFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHK 338
+ T+ S E+V +F+G +K + K
Sbjct: 82 RLVATF-------TDDISTMELV----------------WFKG--------IKWLRDTLK 110
Query: 339 VGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPS-----KGGLN 393
+ E + GK+ N + M +D++ D + P+YPS K G+
Sbjct: 111 INEPYVIYGKINWF--NGAFSMPHPEMDLVAD---FNQTMGNTIQPVYPSTEKLSKRGVT 165
Query: 394 ASLLRDTIARALQAL-PANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLI 452
++R + Q + A ++ +P I L+ +A + IH PK + A+ RL
Sbjct: 166 NRVIRQLMQNLFQDVGKAFYETLPHSILSSLNLISKSEALVNIHFPKSQELLGKAQMRLK 225
Query: 453 FDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKP-----RLNAAYMEGWSSLTKKLLRA 507
F+E FY+QL Q ++ +L K R ++ + + +++
Sbjct: 226 FEELFYIQL------------QLVRKNILQKQRFKGFTFDKVGEVFSDFYNN-------R 266
Query: 508 LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMV 567
LP+ LT +Q + EI D+ MNRLLQGDVG GKT+VA +A + I +G+QA M
Sbjct: 267 LPFDLTQAQKRVLKEIRNDVGSNAQMNRLLQGDVGSGKTIVALMAMLLAIDNGFQACLMA 326
Query: 568 PTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTH 627
PTE+LA+QH++ + +LL+ I LLTGST Q ++I + LQ G + +++GTH
Sbjct: 327 PTEILASQHFQSISELLEG-----SSVTITLLTGSTKNSQRKIIDEQLQEGSLQILVGTH 381
Query: 628 SLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMA 687
+L+ +KV+F L AI+DEQ RFGV QR SKL+ H
Sbjct: 382 ALLEDKVKFKNLGFAIIDEQHRFGVEQR----SKLW------------------KKNHRP 419
Query: 688 PHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
PH+L M+ATPIPRTLA+++YGD+ ++ I +LPPGR PI+T
Sbjct: 420 PHILVMTATPIPRTLAMSVYGDLDISIIDELPPGRKPIQT 459
>gi|315918543|ref|ZP_07914783.1| ATP-dependent DNA helicase [Fusobacterium gonidiaformans ATCC
25563]
gi|313692418|gb|EFS29253.1| ATP-dependent DNA helicase [Fusobacterium gonidiaformans ATCC
25563]
Length = 679
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 163/527 (30%), Positives = 256/527 (48%), Gaps = 83/527 (15%)
Query: 217 LSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFIGEIISSRGMKA 274
L + Y L+ G T+ LL++FPR Y + N + +L +Y + +++ +
Sbjct: 12 LDSKKYKGLKTLGIMTVHDLLYYFPRAYDNRSNIKKIAELRMEEYAVIHAKLLHVYSVPT 71
Query: 275 GCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIE 334
+G ++ T G SG +L + F +P+LK
Sbjct: 72 K---------LGRKMTKATATDG-------SG-----FLEIVWF-------GMPYLKK-- 101
Query: 335 GKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNA 394
K+ E G V+ RS ++M + K + + +G PIY S L+
Sbjct: 102 -SLKLQEEYIFVGTVK--RSMGAFQMTNPEFKLSKGQ-----KMRGEILPIYSSHKNLSQ 153
Query: 395 SLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFD 454
+ LR + L + +PKEI Q++ +L A IH P + A++R +
Sbjct: 154 NRLRKYLKEILFENSLLSENIPKEICQKYNILGRNQALSEIHFPSSEKILEEAKRRFAIE 213
Query: 455 EFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTS 514
E +++G L +F + L + ++EG +L K+ L +LP+ LT
Sbjct: 214 ELLIIEMGIL-------KNRFLTDALTQSF-------YHLEGKKTLVKQYLSSLPFQLTK 259
Query: 515 SQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLAT 574
+Q I+EI DL+Q +NRL+QGDVG GKT+VA + + +I +GYQ A M PTE+LA
Sbjct: 260 AQKKVITEIYKDLEQGRIVNRLVQGDVGSGKTMVAMVLLLYMIENGYQGALMAPTEILAI 319
Query: 575 QHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKV 634
QHY L + M+E ++ LLTGS K+ R + DL+ G+I L+IGTH+L+ E+V
Sbjct: 320 QHY---LGIYSKMQE--LGLRVELLTGSIRGKKRRKLLDDLKEGNIDLLIGTHALLEEEV 374
Query: 635 EFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMS 694
F L ++DEQ RFGV+QR + K T++ L M+
Sbjct: 375 RFHQLGFIVIDEQHRFGVLQRKKLREKGILTNL-----------------------LVMT 411
Query: 695 ATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVY 741
ATPIPR+LAL++YGD+ ++ + +LPPGR PIKT I E+ E +Y
Sbjct: 412 ATPIPRSLALSIYGDLDVSILDELPPGRSPIKTKWI-STEEDMEKMY 457
>gi|401564205|ref|ZP_10805117.1| ATP-dependent DNA helicase RecG [Selenomonas sp. FOBRC6]
gi|400189055|gb|EJO23172.1| ATP-dependent DNA helicase RecG [Selenomonas sp. FOBRC6]
Length = 688
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 158/528 (29%), Positives = 253/528 (47%), Gaps = 85/528 (16%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN----AQIDLDDGQYFIFIGE 265
IS V G+ + G T+ LL ++PR Y D AQ+ + + + +
Sbjct: 6 TISKVRGVGVKKAAAFARLGIQTVYDLLTYYPRAYEDQSRVTPIAQLHAGERATVLAVIQ 65
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFT 325
++ R + F+ L V++G E +G + ++ + +
Sbjct: 66 RVTERQARR-RGFTILTVLLGDE----------------TGYAQAVWFNQR--------- 99
Query: 326 SIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNI---DVLKDEDDLSLRAKGRP 382
FLK+ K + G + ++GK N ++ NI ++L E+D A
Sbjct: 100 ---FLKT---KLREGRRLLLTGKAEYA-YNGGGQLALTNITSFELLGAEEDAG--AHLGI 150
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHI 441
P+Y + GL LR + AL + +P+ + +++ L+ A+ IH PK
Sbjct: 151 LPVYAATEGLTQKQLRAMMEYALAQTADELEENLPQRVREKYRLIGRRSAFWHIHFPKQE 210
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
+E AR+RL F+E + +Q G L T E+EG+ A +G +L
Sbjct: 211 EELRTARRRLAFEELYLIQCGLLALKKR---TAEEQEGI----------AHAADG--TLV 255
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
K++ ALP++LT+ Q EI D++ P+PM RL+QGDVG GKT +A LA ++ + SG+
Sbjct: 256 KRVRAALPFTLTADQEQVWGEIRRDMESPLPMRRLVQGDVGSGKTAIALLALVKTVESGH 315
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q A M PTE+LA QHY++L +LL + ++ L+G K+ + L ++
Sbjct: 316 QGAMMAPTEILARQHYDYLRELLTPL-----GVRVGFLSGRLTKKERTAMDAALAAHEVD 370
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+ +GTH+LI + V F+AL L + DEQ RFGV QR K T
Sbjct: 371 IAVGTHALIQDHVAFAALGLVVTDEQHRFGVAQRAALEKKSAVT---------------- 414
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYI 729
P VL M+ATPIPRT+ L +YGD+ +++I LPPGR PI+T++
Sbjct: 415 ------PDVLVMTATPIPRTMTLTVYGDLDVSRIEHLPPGRQPIRTFL 456
>gi|390630517|ref|ZP_10258498.1| ATP-dependent DNA helicase RecG [Weissella confusa LBAE C39-2]
gi|390484253|emb|CCF30846.1| ATP-dependent DNA helicase RecG [Weissella confusa LBAE C39-2]
Length = 678
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 166/533 (31%), Positives = 244/533 (45%), Gaps = 92/533 (17%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADL-QNAQIDLDDGQYFIFIG 264
LLD + + G+ + L G +T+ LL ++P Y DL + DG+ F G
Sbjct: 4 LLD-LVDELDGVGPKRVQALNKLGIFTIDDLLGYYPMRYNDLAMKTPAETQDGEKVTFKG 62
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
+ S + F + + + T D ++ F
Sbjct: 63 VVTSPPVVN---RFGYKKTRTSFRL----TVEHDTIM--------------------VSF 95
Query: 325 TSIPFLKSIEGKH-KVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY 383
+ P++ GK+ ++G+ V V G R + I ++ D + A
Sbjct: 96 FNQPWI----GKNLEIGQEVAVHGTYDKTRQSLS------GIKLMSRNGDDEMEA----- 140
Query: 384 PIYPSKGGLNASLLRDTIARALQALPA--NFDPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
+YPS + A ++D I +AL D VP + + L+ D G+H P
Sbjct: 141 -VYPSSKEIKAKTIKDLIIQALGKYGELLRTDIVPSNLRTRYKLMNHHDTVFGMHAPTDG 199
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
A AR+ F+EFF Q+ RL Q+++ + D+ + R A +
Sbjct: 200 QVATEARRSASFEEFFVFQM-RL-QVIKSM----------DRDNRGRAIAFN----NDEL 243
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
K + LP+ LT +Q ++EI+ D+K+P+ MNRLLQGDVG GKTVVA LA I +G
Sbjct: 244 KAFIATLPFELTDAQKRVVNEIVRDMKRPIHMNRLLQGDVGSGKTVVAALAMYAAITAGM 303
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
QA M PTE+LA QH + + D K ++ LLTGST R I +DL+ GDI
Sbjct: 304 QATLMAPTEILAQQHAKTIGNFF-----DPEKVRVELLTGSTKAAARRQILEDLENGDID 358
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
++IGTH+LI + F L LA++DEQ RFGV QR
Sbjct: 359 ILIGTHALIQPDIAFRNLGLAVIDEQHRFGVQQRATLR---------------------- 396
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
+ M P +LAM+ATPIPRTLA+ YG+M ++ I LP GR IKTY + NE
Sbjct: 397 -EIGMNPDILAMTATPIPRTLAITAYGEMDVSIIDQLPAGRKQIKTYWLRSNE 448
>gi|451337360|ref|ZP_21907905.1| ATP-dependent DNA helicase RecG [Amycolatopsis azurea DSM 43854]
gi|449419955|gb|EMD25466.1| ATP-dependent DNA helicase RecG [Amycolatopsis azurea DSM 43854]
Length = 717
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 160/522 (30%), Positives = 253/522 (48%), Gaps = 93/522 (17%)
Query: 232 TLRKLLHHFPRTYADLQN----AQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGC 287
T+ LL H+PR YA+ A ++L + + E ++ R MKA + + LE++
Sbjct: 28 TVSDLLRHYPRRYAERGQLTDIAGLELGEHATVMARIERVNKRRMKA-RNGTLLEMV--- 83
Query: 288 EIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSG 347
I G+++ + +R + GK+ G F +G
Sbjct: 84 ---------------ITDGKRRLQCTFFNQAWREKEL--------VPGKN--GLF---AG 115
Query: 348 KVRAMR-----SNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIA 402
KV A R +N YE+ + +D L+ P+YP+ G+ ++ ++
Sbjct: 116 KVTAFRDVLQLANPEYELFDAERAPEAMDDFLA-----EIIPVYPAAQGIPTWVIAKSVR 170
Query: 403 RALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQL- 461
+ L L + DP+P E+ ++GL L A GIH+P D + AR+RL +DE +QL
Sbjct: 171 QVLDVLEVDEDPMPLELLAQYGLPSLESALRGIHRPSGWDALNSARRRLKWDEAMAVQLI 230
Query: 462 --GRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSA 519
R + ++ +P + EG + + LP++LTS Q
Sbjct: 231 FAQRRHSLVS----------------RPAKACPHTEG--GILDAFDKRLPFALTSGQQEI 272
Query: 520 ISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEH 579
EI DL PMNRLLQG+VG GKTVVA A ++++ SG QAA + PTE+LA QH
Sbjct: 273 GDEIARDLSTEHPMNRLLQGEVGSGKTVVALRAMLQIVDSGRQAAMLAPTEVLAAQHARS 332
Query: 580 LLKLLDNMEE------DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEK 633
L ++L ++ + ++ ++ LLTGS K+ + + +G+ +V+GTH+LI +
Sbjct: 333 LSEMLGDLGQAGQLGGAENATRVTLLTGSMGAKERKKALLETVSGEAGIVVGTHALIQDT 392
Query: 634 VEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAM 693
V F+ L L +VDEQ RFGV QR S+ SD +PHVL M
Sbjct: 393 VSFADLGLVVVDEQHRFGVEQRDALRSR-------------GSD-------ETSPHVLVM 432
Query: 694 SATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
+ATPIPRT+A+ +YGD+ + + +P GR PIKT ++ E+
Sbjct: 433 TATPIPRTVAMTVYGDLETSALRVMPAGRSPIKTSVVPVAER 474
>gi|149006640|ref|ZP_01830339.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae
SP18-BS74]
gi|307127909|ref|YP_003879940.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 670-6B]
gi|417677426|ref|ZP_12326833.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA17545]
gi|418096803|ref|ZP_12733914.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA16531]
gi|418113038|ref|ZP_12750038.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA41538]
gi|418133152|ref|ZP_12770023.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA11304]
gi|418155684|ref|ZP_12792411.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA16242]
gi|418226082|ref|ZP_12852710.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae NP112]
gi|419467312|ref|ZP_14007193.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA05248]
gi|419513090|ref|ZP_14052722.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA05578]
gi|419517297|ref|ZP_14056913.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA02506]
gi|421283836|ref|ZP_15734622.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA04216]
gi|421299159|ref|ZP_15749846.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA60080]
gi|147761938|gb|EDK68901.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae
SP18-BS74]
gi|306484971|gb|ADM91840.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 670-6B]
gi|332072867|gb|EGI83348.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA17545]
gi|353768524|gb|EHD49048.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA16531]
gi|353783400|gb|EHD63829.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA41538]
gi|353805035|gb|EHD85313.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA11304]
gi|353819933|gb|EHE00122.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA16242]
gi|353881279|gb|EHE61093.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae NP112]
gi|379543059|gb|EHZ08211.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA05248]
gi|379634255|gb|EHZ98820.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA05578]
gi|379639370|gb|EIA03914.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA02506]
gi|395880522|gb|EJG91574.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA04216]
gi|395900630|gb|EJH11568.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA60080]
Length = 671
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 164/531 (30%), Positives = 257/531 (48%), Gaps = 97/531 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S N ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLNGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ QML+ + + GL+ + + ++ A +
Sbjct: 197 LAEYKQALRRIKFEELFYFQMQ--LQMLKS-ENRVQGSGLVLNWSQEKVTAVKV------ 247
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
+LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +G
Sbjct: 248 ------SLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTAG 301
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+
Sbjct: 302 YQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGEA 354
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 355 DLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN-- 398
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 -------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|295104656|emb|CBL02200.1| ATP-dependent DNA helicase RecG [Faecalibacterium prausnitzii
SL3/3]
Length = 686
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 167/557 (29%), Positives = 249/557 (44%), Gaps = 106/557 (19%)
Query: 197 LPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN----AQI 252
+P+E D + + G+ + + E G TL LL H+PR Y D A+
Sbjct: 1 MPTENRTTLTPDTPVRYLKGVGPKTAERFEKLGIVTLADLLCHYPRRYIDFSKPYSIAEA 60
Query: 253 DLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSG------ 306
D + E+ + G + +E I T+GD+V +++
Sbjct: 61 PAD--TECVVKAEVFAKPGGRILPGGRRMERI----------TAGDDVASLEITWFNNPY 108
Query: 307 QKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNID 366
+K+ L + +F+G + G +R N E
Sbjct: 109 ATQKLQLGQEYYFQG---------------------IVTGGMLRRQMVNPQVRTAE---- 143
Query: 367 VLKDEDDLSLRAKGRPY-PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGL 425
+ + P+ +YP GL +S + I + L DP+P E+ Q++ L
Sbjct: 144 ----------QIQAAPFEAVYPQTEGLTSSAISRCIRQLLPHAELLPDPLPPEMLQKYRL 193
Query: 426 LCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYR 485
L +A IH P ++A AR+RLI++E LQLG +G + +
Sbjct: 194 LPKAEAVRAIHCPATEEQAAAARRRLIYEELLVLQLG--------IGRMRSRGAAVTG-- 243
Query: 486 KPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGK 545
P A W SL P++ T +Q A+ EI+ D+ MNRLLQGDVG GK
Sbjct: 244 APMRRADPSPFWQSL--------PFAPTGAQRRAVEEILNDMAGDTAMNRLLQGDVGSGK 295
Query: 546 TVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPV 605
T+VA A I +GYQAA + PTE+LA QH E L +LL ++ALLTG
Sbjct: 296 TLVAAAAIWACIRAGYQAALLAPTEILAAQHAEGLNRLLAPFGM-----RVALLTGGMKA 350
Query: 606 KQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYT 665
R ++ + LV+GTH+L++E VEF+ L LA++DEQ RFGV QRG K
Sbjct: 351 AARRTTLAAIRKDEADLVVGTHALMSEGVEFARLGLAVIDEQHRFGVRQRGALAEK---- 406
Query: 666 SMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
PH+L MSATPIPRTL L +YGD+ ++ + +LPPGR P+
Sbjct: 407 -------------------AANPHLLVMSATPIPRTLGLLIYGDLDISILDELPPGRTPV 447
Query: 726 KTYIIEGNEKGYENVYK 742
KT I G + +++Y+
Sbjct: 448 KTRCITGKRR--QDLYR 462
>gi|154482960|ref|ZP_02025408.1| hypothetical protein EUBVEN_00658 [Eubacterium ventriosum ATCC
27560]
gi|149736244|gb|EDM52130.1| putative ATP-dependent DNA helicase RecG [Eubacterium ventriosum
ATCC 27560]
Length = 674
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 141/420 (33%), Positives = 213/420 (50%), Gaps = 69/420 (16%)
Query: 319 FRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYE------MREYNIDVLKDED 372
+ T F S P+LK GK +G G V+ SN E + EYN
Sbjct: 87 IKATWFNS-PYLK---GKLTIGSTFIFRGFVKENYSNFSIEQPKIFGIAEYN-------- 134
Query: 373 DLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAY 432
+ KG P+YP GL ++++ + +AL+ + + +P++I ++GL L A
Sbjct: 135 ----KKKGEMQPVYPLVSGLTNNMVQKAVKQALKLVETE-EFLPEKIRNKYGLEGLQQAI 189
Query: 433 MGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQM--LEGLGTQFEKEGLLDKYRKPRLN 490
IH P ++ ARKRLIFDEFF +Y + L+ T+ +L + ++
Sbjct: 190 EHIHYPTDKNQLYSARKRLIFDEFFMF----IYNIRNLKDKNTEIHNRHILVEPKE---- 241
Query: 491 AAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAF 550
K L+ LPY LT++Q EI D+ MNRL+QGDVG GKT++AF
Sbjct: 242 ----------VKTLINNLPYELTNAQKRTWEEIKRDISSTKVMNRLIQGDVGSGKTIIAF 291
Query: 551 LACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRM 610
A + + Q A M PTE+LA QHY++L++L+ +E +L GS K+ R
Sbjct: 292 FALITAALNNGQGAMMAPTEVLARQHYDNLIELI---KEHNINVNPVVLVGSMTAKEKRE 348
Query: 611 IRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSG 670
K +++GD ++IGTH+LI EKV ++ L + + DEQ RFGV QR + K
Sbjct: 349 AYKVIESGDADIIIGTHALIQEKVNYNNLTMVVTDEQHRFGVRQREAISEK--------- 399
Query: 671 MAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+H PH++ MSATPIPRTLA+ +YGD+ ++ I +LP R+PI ++
Sbjct: 400 ------------GEH--PHIMVMSATPIPRTLAIIMYGDLDISVIDELPANRLPIANCVV 445
>gi|374597832|ref|ZP_09670834.1| ATP-dependent DNA helicase RecG [Myroides odoratus DSM 2801]
gi|423323834|ref|ZP_17301676.1| ATP-dependent DNA helicase RecG [Myroides odoratimimus CIP 103059]
gi|373909302|gb|EHQ41151.1| ATP-dependent DNA helicase RecG [Myroides odoratus DSM 2801]
gi|404609052|gb|EKB08477.1| ATP-dependent DNA helicase RecG [Myroides odoratimimus CIP 103059]
Length = 700
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 129/348 (37%), Positives = 193/348 (55%), Gaps = 46/348 (13%)
Query: 385 IYPSKGGLNASLLRDTIARALQAL-----PANFDPVPKEITQEFGLLCLFDAYMGIHQPK 439
+YPS L A + + + + L P D +P++ + GL+ + A + IH PK
Sbjct: 152 VYPSTEKLGARISNKAMNKLMHQLVQETHPLFRDSLPEDFRTKLGLMPMNQAMVNIHFPK 211
Query: 440 HIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSS 499
+ DE + A+ RL F+E FY+Q+ L ++ + + + +G N Y
Sbjct: 212 NPDELNKAQFRLKFEELFYIQMQLL---IKNIARKGKIQGFPFTQVGEYFNTFYN----- 263
Query: 500 LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
LP+ LT++Q I EI D+ P MNRLLQGDVG GKT+VAF++ + + +
Sbjct: 264 ------HHLPFPLTNAQKRVIKEIRNDVGAPAQMNRLLQGDVGSGKTIVAFISTLFALDN 317
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
G+QA + PTE+LATQH+ + +L + ++ LLTGST + R+I DL+ G
Sbjct: 318 GFQACIVAPTEILATQHFIGISELAAPL-----GIQVKLLTGSTKTAERRVIHHDLEEGS 372
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
+ ++IGTH+L +KV F L LAI+DEQ RFGV QR SKL+ +
Sbjct: 373 LQILIGTHALFEDKVIFKNLGLAIIDEQHRFGVEQR----SKLWKKNT------------ 416
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PH+L M+ATPIPRTLA++LYGD+ ++ I +LPPGR PI+T
Sbjct: 417 ------IPPHILVMTATPIPRTLAMSLYGDLDISVIDELPPGRKPIQT 458
>gi|395243956|ref|ZP_10420934.1| DNA helicase RecG [Lactobacillus hominis CRBIP 24.179]
gi|394483788|emb|CCI81942.1| DNA helicase RecG [Lactobacillus hominis CRBIP 24.179]
Length = 682
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 170/533 (31%), Positives = 259/533 (48%), Gaps = 100/533 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGEIIS- 268
++ + G+ + L + G ++ LL +FP Y +L+ +D + DGQ + G +++
Sbjct: 14 VTALKGVGTKTAEALSSLGINSIYDLLFYFPFRYDELETLPLDQIMDGQKVLLKGTVVTE 73
Query: 269 ---SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFT 325
SR SF ++ + +I +VN F
Sbjct: 74 PFVSRFGYKKSRLSF-KIQIDHDIV---------MVN---------------------FF 102
Query: 326 SIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPI 385
+ P+LK K ++G+ V V GK R + + + + + + D L A I
Sbjct: 103 NQPWLKD---KLELGKDVAVYGKYNVARQS----LSAFKF-IAEKKSDSGLAA------I 148
Query: 386 YPSKGGLNASLLRDTIARALQA-LPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
YP + L++ I +A++ LP + VP++I +++ L +H PK+ A
Sbjct: 149 YPLNRHVRQKKLQELIDQAIKEYLPQVDNVVPEDIRKKYRLETDQAIVQDMHHPKNAAMA 208
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
+A++ IF EFF Q+ +L QM+ E +K L A K+L
Sbjct: 209 KVAKRSAIFREFFLFQI-QLAQMMSMRDDDAPGEA-----KKYDLAA---------IKEL 253
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
+ LP+ L+ Q ++EI DL+ P M RLLQGDVG GKTVVA A VI +GYQAA
Sbjct: 254 IAKLPFELSDDQKKVVNEIFADLRSPRQMRRLLQGDVGAGKTVVAVFAIYAVITAGYQAA 313
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKP---KIALLTGSTPVKQSRMIRKDLQTGDIT 621
MVPTE+LA QH+ + +LL +P ++ALLTG T + + I ++L G I
Sbjct: 314 LMVPTEILAEQHFAKIDELL--------RPLGVRVALLTGDTKDLEKKEIYQELADGMIN 365
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+VIGTH+LI + V+F L LAI+DEQ RFGV QR + SK
Sbjct: 366 VVIGTHALIQDSVQFKNLGLAIIDEQHRFGVNQRNKLISK-------------------- 405
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
P +LAM+ATPIPRTLAL +YG+M+++ I LP GR PI + + N+
Sbjct: 406 ---GKNPDILAMTATPIPRTLALTVYGEMAVSSIRHLPKGRKPIISSWVTSNK 455
>gi|363581632|ref|ZP_09314442.1| ATP-dependent DNA helicase RecG [Flavobacteriaceae bacterium HQM9]
Length = 701
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 132/350 (37%), Positives = 194/350 (55%), Gaps = 47/350 (13%)
Query: 384 PIYPSKGGLNA-SLLRDTIARALQAL---PANF--DPVPKEITQEFGLLCLFDAYMGIHQ 437
PIY S L ++ I++ +Q L F + +PK I L+ DA + IH
Sbjct: 151 PIYSSTEMLQKRNITNKVISKMVQNLFLTKGIFFEETLPKNILDHLKLIGKSDALLNIHF 210
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGW 497
PK D A RL F+E FY+QL Q++ Q +K + Y ++ A + + +
Sbjct: 211 PKSQDLLTKASYRLKFEELFYIQL----QLIRKNILQKQK---IKGYAFEKVGAMFTDFY 263
Query: 498 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
+ LP++LT +Q I EI D+ MNRLLQGDVG GKT+VA ++ + I
Sbjct: 264 EN-------HLPFNLTGAQKRVIKEIRRDMGNEAQMNRLLQGDVGSGKTIVALMSMLLAI 316
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
+G+QAA M PT +LA QH++ + +L+ +++ + ++LL GST K RM+ DL+
Sbjct: 317 DNGFQAALMAPTAILAKQHFDGISELVKDLQIN-----VSLLMGSTKTKARRMLHTDLEN 371
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
G I ++IGTH+L+ +KV+F+ L LAI+DEQ RFGV QR + K
Sbjct: 372 GQIHILIGTHALLEDKVKFNNLGLAIIDEQHRFGVAQRAKLWRK---------------- 415
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PHVL M+ATPIPRTLA++LYGD+ ++ I +LPPGR IKT
Sbjct: 416 ------NKLPPHVLVMTATPIPRTLAMSLYGDLDVSVIDELPPGRKSIKT 459
>gi|148997750|ref|ZP_01825314.1| N-acetylmannosamine-6-phosphate 2-epimerase [Streptococcus
pneumoniae SP11-BS70]
gi|148999065|ref|ZP_01826496.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae
SP11-BS70]
gi|168575113|ref|ZP_02721076.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae MLV-016]
gi|307068324|ref|YP_003877290.1| RecG-like helicase [Streptococcus pneumoniae AP200]
gi|418149054|ref|ZP_12785816.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA13856]
gi|419471582|ref|ZP_14011441.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA07914]
gi|419504431|ref|ZP_14044099.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47760]
gi|421239024|ref|ZP_15695588.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2071247]
gi|421245533|ref|ZP_15702031.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2081685]
gi|421314570|ref|ZP_15765157.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47562]
gi|147755104|gb|EDK62160.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae
SP11-BS70]
gi|147756249|gb|EDK63291.1| N-acetylmannosamine-6-phosphate 2-epimerase [Streptococcus
pneumoniae SP11-BS70]
gi|183578801|gb|EDT99329.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae MLV-016]
gi|306409861|gb|ADM85288.1| RecG-like helicase [Streptococcus pneumoniae AP200]
gi|353811390|gb|EHD91632.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA13856]
gi|379546298|gb|EHZ11437.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA07914]
gi|379605819|gb|EHZ70569.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47760]
gi|395600667|gb|EJG60822.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2071247]
gi|395608060|gb|EJG68156.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2081685]
gi|395913255|gb|EJH24108.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47562]
Length = 671
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 164/531 (30%), Positives = 257/531 (48%), Gaps = 97/531 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S N ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLNGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ QML+ + + GL+ + + ++ A +
Sbjct: 197 LAEYKQALRRIKFEELFYFQMQ--LQMLKS-ENRVQGSGLVLNWSQEKVTAVKV------ 247
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
+LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +G
Sbjct: 248 ------SLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTAG 301
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+
Sbjct: 302 YQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGEA 354
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 355 DLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN-- 398
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 -------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|386827025|ref|ZP_10114132.1| ATP-dependent DNA helicase RecG [Beggiatoa alba B18LD]
gi|386427909|gb|EIJ41737.1| ATP-dependent DNA helicase RecG [Beggiatoa alba B18LD]
Length = 686
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 181/546 (33%), Positives = 250/546 (45%), Gaps = 99/546 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQ--NAQIDLDDGQYFIFIG 264
+ + ++ + G+ K+ QL G T+ +L H P Y D A DL+ G+ + G
Sbjct: 1 MSQSVTSLQGVGKQTAAQLATLGISTVDDVLFHLPARYEDRSRLTAIKDLNVGEQALVEG 60
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHL-----KKFF 319
+I E+ T+ + ++ D+G + H ++F
Sbjct: 61 ------------------MITAAEVKITKRRTLVCMLTDDTGGIILRFFHFSYAQQQQFQ 102
Query: 320 RGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAK 379
GTR F ++ +G H + EF+ H E + ED +
Sbjct: 103 VGTRVRC--FAEARQGYHCL-EFI-------------HPECQ------FIREDKPAPEIH 140
Query: 380 GRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPK 439
+ PIYPS G L+ LLR +ALQ L DP P I +F LL L A +H P
Sbjct: 141 AQLTPIYPSSGTLHQHLLRSLARQALQNL-VLIDPFPPTIQAQFQLLPLAQALQTLHAPP 199
Query: 440 -HIDEADL------ARKRLIFDEFF--YLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLN 490
+ ADL A++RLI +E YL L RL Q + Y+ L
Sbjct: 200 VTVSTADLQAGQHPAQRRLIIEELLAHYLSLRRLRQQAQ-------------TYQAVPLP 246
Query: 491 AAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAF 550
A + +L L+ LP+ LT +Q +EI DL+Q PM RL+QGDVG GKTVVA
Sbjct: 247 AEH-----ALNSLFLKNLPFQLTHAQQRVSAEIAHDLQQTHPMQRLIQGDVGSGKTVVAA 301
Query: 551 LACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRM 610
L+ + I +GYQ A M PTELLA QH+ + + L + K I LTGS KQ
Sbjct: 302 LSALSAIAAGYQVAVMSPTELLAEQHFRNFNQWLAPL-----KINITWLTGSVSKKQREQ 356
Query: 611 IRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSG 670
L TG+ L IGTH+L E V F L L I+DEQ RFGV QR
Sbjct: 357 ALNALATGESALAIGTHALFQEAVTFQRLALVIIDEQHRFGVEQR--------------- 401
Query: 671 MAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
M D + + H PH L M+ATPIPRTLA+ LY D+ ++ I +LP GR+PIKT +I
Sbjct: 402 --MALRDKGAQANFH--PHQLIMTATPIPRTLAMTLYADLDISVIDELPAGRLPIKTVVI 457
Query: 731 EGNEKG 736
+
Sbjct: 458 PNTRRA 463
>gi|336113772|ref|YP_004568539.1| ATP-dependent DNA helicase RecG [Bacillus coagulans 2-6]
gi|335367202|gb|AEH53153.1| ATP-dependent DNA helicase RecG [Bacillus coagulans 2-6]
Length = 563
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/352 (36%), Positives = 183/352 (51%), Gaps = 44/352 (12%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKHID 442
P+Y KG + LR I A +A + V P E+ ++ L+ A +H PK
Sbjct: 24 PVYAVKGKMTVKTLRKYIESAFRAFGGEIEEVLPAEMLAKYKLMPKKQAMYAMHFPKSEQ 83
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
E +AR+ ++++EF QL K L K+ + N + +
Sbjct: 84 EVKMARRTIVYEEFLAFQL---------------KMQALRKFEREHSNGRAIRYDVRKLR 128
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
+ +LP+ LT +Q ++EI D+K P MNRLLQGDVG GKTVVA +A + +G+Q
Sbjct: 129 NFIGSLPFPLTDAQKRVVNEICADMKSPFRMNRLLQGDVGSGKTVVAAIALYAAVTAGFQ 188
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
A MVPTE+LA QH E L +LL + H ++ALLT + K+ + + + L TG + +
Sbjct: 189 GALMVPTEILAEQHAESLCQLL-----EPHGVRVALLTSTVKGKRRKALLEQLGTGGVDI 243
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
+IGTH+LI E V FS L L I DEQ RFGV QR K
Sbjct: 244 LIGTHALIQEDVAFSRLGLVITDEQHRFGVEQRRILREK--------------------- 282
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
M P VL M+ATPIPRTLA+ ++G+M ++ I +P GR I+TY ++ N+
Sbjct: 283 --GMNPDVLFMTATPIPRTLAITVFGEMDVSVIDQMPAGRKKIETYWVKNNQ 332
>gi|295102722|emb|CBL00267.1| ATP-dependent DNA helicase RecG [Faecalibacterium prausnitzii L2-6]
Length = 686
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 166/551 (30%), Positives = 243/551 (44%), Gaps = 104/551 (18%)
Query: 197 LPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN----AQI 252
+P+E D + + G+ + + E G TL LL H+PR Y D A+
Sbjct: 1 MPAELHTTLTPDTPVRYLKGVGPKTAERFEKLGILTLSDLLCHYPRRYLDFSKPYSIAEA 60
Query: 253 DLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSG------ 306
D + E+ + G + +E I T+GD+V +++
Sbjct: 61 PAD--TECVVKAEVFAKPGGRILPGGRRMERI----------TAGDDVSSLEITWFNNPY 108
Query: 307 QKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNID 366
+K+ L + +F+G + G +R N
Sbjct: 109 AAQKLELGQEYYFQG---------------------IVTGGMLRRQMVNPQVRT------ 141
Query: 367 VLKDEDDLSLRAKGRPY-PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGL 425
+ K P+ +YP GL +S + + + L DP+P E+ +++ L
Sbjct: 142 --------DAQVKSSPFEAVYPQTEGLTSSAIAKCVRQLLPHAELLPDPLPPEMLKKYRL 193
Query: 426 LCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYR 485
L DA IH P +EA AR+RLI++E LQLG G +
Sbjct: 194 LSKADAVRAIHCPATEEEAFAARRRLIYEELLVLQLGIGRMKNHGAASTG---------- 243
Query: 486 KPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGK 545
P A W SL P+S T +Q A+ EI+ D+ MNRLLQGDVG GK
Sbjct: 244 APMKKADVSPFWESL--------PFSPTGAQRRAVEEILTDMSGETSMNRLLQGDVGSGK 295
Query: 546 TVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPV 605
T+VA A I +GYQAA + PTE+LA+QH E+L +LL + ALLTG
Sbjct: 296 TLVAAAAIWACIRAGYQAALLAPTEILASQHAENLNRLLSPFGM-----RAALLTGGMKA 350
Query: 606 KQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYT 665
R ++ + L++GTH++++E VEF+ L LA+VDEQ RFGV QRG K
Sbjct: 351 AARRTTLAAIRDDEADLIVGTHAILSEGVEFARLGLAVVDEQHRFGVRQRGLLAEK---- 406
Query: 666 SMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
PH+L MSATPIPRTL L +YGD+ ++ + +LPPGR P+
Sbjct: 407 -------------------AANPHLLVMSATPIPRTLGLLMYGDLDISILDELPPGRKPV 447
Query: 726 KTYIIEGNEKG 736
KT I G ++
Sbjct: 448 KTRCITGKKRA 458
>gi|167765297|ref|ZP_02437410.1| hypothetical protein BACSTE_03685 [Bacteroides stercoris ATCC
43183]
gi|167696925|gb|EDS13504.1| ATP-dependent DNA helicase RecG [Bacteroides stercoris ATCC 43183]
Length = 698
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 173/519 (33%), Positives = 250/519 (48%), Gaps = 103/519 (19%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNA-QIDLDDGQ--YFIFIGEIISSRGMKAGCSFSFLE 282
+ G ++ LL++FP Y D +I DG Y GEI+
Sbjct: 25 KELGIFSFHDLLYYFPYKYVDRSRIYRIREIDGAMPYIQLKGEIL--------------- 69
Query: 283 VIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIE---GKHKV 339
G E T+G+ G+++++ H F GT + + + I+ GK+KV
Sbjct: 70 ---GFE------TAGE-------GRQRRLIAH---FSDGTGIVDLIWFQGIKYLIGKYKV 110
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG-RPYPIYPSKGGLN-ASLL 397
+ V GK N + +ID +L L A G +PY Y + + +SL
Sbjct: 111 HQEYIVFGKPTVF--NGRINIAHPDID---PASELKLSAMGLQPY--YNTTEKMKRSSLN 163
Query: 398 RDTIARALQALPANFD-PVPKEIT----QEFGLLCLFDAYMGIHQPKHIDEADLARKRLI 452
I + +++L + P+P+ ++ E L+ L DA M IH P D A RL
Sbjct: 164 SHAIEKMMKSLVGQLNEPLPETLSPALLAEHHLMPLTDALMNIHFPSGPDVLRKAEYRLK 223
Query: 453 FDEFFYLQLGRLY----QMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRAL 508
F+E FY+QL L + + G FEK G + N Y R L
Sbjct: 224 FEELFYVQLNILRYAKDRQRKYWGYVFEKVGDI-------FNGFYS-----------RNL 265
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
P+ LT++Q + EI DL MNRLLQGDVG GKT+VA ++ + + +GYQA M P
Sbjct: 266 PFELTNAQKRVLKEIRRDLGAGRQMNRLLQGDVGSGKTLVALMSMLIALDNGYQACMMAP 325
Query: 569 TELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHS 628
TE+LA QHYE + +LL M+ ++ LLTGS K+ I L TGD+ ++IGTH+
Sbjct: 326 TEILANQHYETIRELLYGMD-----VRVELLTGSIKGKRRETILSGLLTGDVQILIGTHA 380
Query: 629 LIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAP 688
+I + V F++L L ++DEQ RFGV QR R +K P
Sbjct: 381 VIEDTVNFASLGLVVIDEQHRFGVAQRARLWTK----------------------SVQPP 418
Query: 689 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
H+L M+ATPIPRTLA+ LYGD+ ++ I +LPPGR PI T
Sbjct: 419 HILVMTATPIPRTLAMTLYGDLDVSVIDELPPGRKPIAT 457
>gi|402846299|ref|ZP_10894612.1| ATP-dependent DNA helicase RecG [Porphyromonas sp. oral taxon 279
str. F0450]
gi|402268000|gb|EJU17387.1| ATP-dependent DNA helicase RecG [Porphyromonas sp. oral taxon 279
str. F0450]
Length = 699
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 149/439 (33%), Positives = 228/439 (51%), Gaps = 65/439 (14%)
Query: 302 NIDSGQKKKIYLHLKKFFRGT------RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSN 355
+ G+KK++ + F GT F S+P+++ ++ G++ V GK + N
Sbjct: 74 EVGEGRKKRLVAY---FTDGTGTIELVWFRSMPYIRQ---RYIPGQWYLVFGK--PVFFN 125
Query: 356 NHYEMREYNIDVLKDEDDLSLRAKGRPYPIYP-----SKGGLNASLLRDTIARALQA-LP 409
Y + ID E+ + + G P+YP ++ GLN+ +R + +A +P
Sbjct: 126 GAYSISHPEID----EESKAAQVSGGLMPVYPLTEKLTRAGLNSRQMRQLLYVLKEACVP 181
Query: 410 ANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLE 469
+ + EI + L+ +A IH P + + AR+RL FDE F++QL RL
Sbjct: 182 HITETLTPEIIERARLMSYAEAIEQIHFPVTKEGLEAARRRLKFDELFFIQL-RL----- 235
Query: 470 GLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQ 529
LG + +++ PR+ A + L +LP+ LT +Q I EI D+
Sbjct: 236 -LGMKRDRKAASPGLLLPRVGDA--------IRGLYGSLPFDLTGAQKRVIREIQADVIS 286
Query: 530 PVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEE 589
MNRL+QGDVG GKT+VA + + + +GYQA M PTE+LA QHY L + L +
Sbjct: 287 GRQMNRLIQGDVGSGKTLVALFSMLLSVDNGYQACMMAPTEILARQHYASLCEYLAPL-- 344
Query: 590 DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQR 649
++ LL GST K+ + DL TG + +++GTH+L+ V+F+ L LA++DEQ R
Sbjct: 345 ---GIEVGLLIGSTKKKERTRLLADLSTGALKIIVGTHALLEPVVQFAHLGLAVIDEQHR 401
Query: 650 FGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGD 709
FGVVQR G + + + PH+L MSATPIPRTLA+ LYGD
Sbjct: 402 FGVVQR---------------------SGLWQKGEQIHPHILIMSATPIPRTLAMTLYGD 440
Query: 710 MSLTQITDLPPGRIPIKTY 728
+ ++ I +LPPGR PI+TY
Sbjct: 441 LDISVIDELPPGRKPIETY 459
>gi|149370699|ref|ZP_01890388.1| ATP-dependent DNA helicase [unidentified eubacterium SCB49]
gi|149356250|gb|EDM44807.1| ATP-dependent DNA helicase [unidentified eubacterium SCB49]
Length = 701
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 219/421 (52%), Gaps = 70/421 (16%)
Query: 318 FFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLR 377
+FRG ++ I+ K+ + + GK + N + M ++++K+ + LR
Sbjct: 98 WFRGQKW--------IKDNLKINQPYVIFGKTKWF--NGSFSMPHPELELVKEHKN-KLR 146
Query: 378 AKGRPYPIYPSKGGLNASLLRDTIARAL------QALPANFDPVPKEITQEFGLLCLFDA 431
+ +P IYPS L S + + + L A A + + K I E LL +A
Sbjct: 147 SSMQP--IYPSTEKLTNSGITNKVINKLMEQVFLDAKNAFTETLSKPIINELKLLSKSEA 204
Query: 432 YMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDK-----YRK 486
IH P++ + A RL F+E FY+QL Q ++ L+ K Y
Sbjct: 205 IFNIHFPENGERLARAEYRLKFEELFYIQL------------QLIRKNLIHKSKIKGYPF 252
Query: 487 PRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKT 546
P + + ++ LP+ LT +Q + EI DL MNRLLQGDVG GKT
Sbjct: 253 PVVGDNFKNFYN-------HHLPFQLTGAQKRVVKEIRQDLGSNAQMNRLLQGDVGSGKT 305
Query: 547 VVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVK 606
+VA L+ + + +G+QA M PT +L+ QHY L++L +E I+LLTGS+
Sbjct: 306 IVALLSMLIALDNGFQACLMAPTAILSVQHYNGLVELCKGLE-----ISISLLTGSSTTS 360
Query: 607 QSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTS 666
Q ++I ++L+ G + ++IGTH+L+ +KV+F L LAI+DEQ RFGV QR SKL++ +
Sbjct: 361 QRKVIHENLENGSLNILIGTHALLEDKVKFKNLGLAIIDEQHRFGVAQR----SKLWHKN 416
Query: 667 MSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIK 726
+ PHVL M+ATPIPRTLA+++YGD+ ++ I +LPPGR IK
Sbjct: 417 ------------------ELPPHVLVMTATPIPRTLAMSVYGDLDISIIDELPPGRKEIK 458
Query: 727 T 727
T
Sbjct: 459 T 459
>gi|21223922|ref|NP_629701.1| ATP-dependent DNA helicase RecG [Streptomyces coelicolor A3(2)]
gi|289768871|ref|ZP_06528249.1| ATP-dependent DNA helicase RecG [Streptomyces lividans TK24]
gi|4007725|emb|CAA22409.1| putative ATP-dependent DNA helicase [Streptomyces coelicolor A3(2)]
gi|289699070|gb|EFD66499.1| ATP-dependent DNA helicase RecG [Streptomyces lividans TK24]
Length = 742
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 159/529 (30%), Positives = 243/529 (45%), Gaps = 82/529 (15%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNAQI----DLDDGQYFIFIGEIISSRGMKAGCSFSFL 281
E+ G +T+ LLHH+PR Y + Q+ DL ++ + ++ +R S +
Sbjct: 25 EHLGLHTVGDLLHHYPRRYE--ERGQLTHLADLPMDEHVTVVAQVADARLHTFASSKAPR 82
Query: 282 EVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGE 341
E+ T+ + ++V +G ++ K+ GTR
Sbjct: 83 GKGQRLEVTITDGSGRLQLVFFGNG----VHKPHKELLPGTR------------------ 120
Query: 342 FVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAK------GRPYPIYPSKGGLNAS 395
+GKV N ++ ++L+ DD A+ G P+YP+ L +
Sbjct: 121 -AMFAGKVSVF--NRRLQLAHPAYELLRGGDDEGEAAESVESWAGALIPLYPATAKLESW 177
Query: 396 LLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDE 455
L I L + DP+P + + GL+ L +A + IH+P + + AR RL +DE
Sbjct: 178 KLAKAIQTVLPSAQEAVDPLPGSLREGRGLVSLPEALLKIHRPHTKADIEDARARLKWDE 237
Query: 456 FFYLQLGRLYQMLEGLGTQFEKEGLLDKY-RKPRLNAAYMEGWSSLTKKLLRALPYSLTS 514
F LQ+ L + E L RKP G L LP++LT
Sbjct: 238 AFVLQVA--------LARRRHAESQLPAVPRKP--------GADGLLTAFDDRLPFTLTD 281
Query: 515 SQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLAT 574
Q EI DL PM+RLLQG+VG GKT+VA A + V+ SG QA + PTE+LA
Sbjct: 282 GQRKVSREIFDDLATDHPMHRLLQGEVGSGKTLVALRAMLAVVDSGGQAVMLAPTEVLAQ 341
Query: 575 QHYEHLLKLLDNMEED------KHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHS 628
QH+ +++++ + E +H K+ LLTGS R DL TG+ +VIGTH+
Sbjct: 342 QHHRSVVEMMGELAEGGMLGGAEHATKVVLLTGSMGAAARRHALLDLATGEAGIVIGTHA 401
Query: 629 LIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAP 688
LI +KV+F L L +VDEQ RFGV QR K P
Sbjct: 402 LIEDKVQFHDLGLVVVDEQHRFGVEQRDALRGK----------------------GKQPP 439
Query: 689 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGY 737
H+L M+ATPIPRT+A+ ++GD+ + + LP GR PI ++++ +K +
Sbjct: 440 HLLVMTATPIPRTVAMTVFGDLETSVLDQLPAGRSPIASHVVPAADKPH 488
>gi|255530074|ref|YP_003090446.1| ATP-dependent DNA helicase RecG [Pedobacter heparinus DSM 2366]
gi|255343058|gb|ACU02384.1| ATP-dependent DNA helicase RecG [Pedobacter heparinus DSM 2366]
Length = 701
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 132/364 (36%), Positives = 197/364 (54%), Gaps = 56/364 (15%)
Query: 381 RPYPIYPSKGGLNASLLRDTIARALQALPANF------DPVPKEITQEFGLLCLFDAYMG 434
R P+Y S L S L + LQAL + +P I Q++ ++ +A +
Sbjct: 149 RLQPVYNSTEKLKKSFLDSKGIQKLQALLLEQHLHEVKETIPPYILQKYQMILRKEAILN 208
Query: 435 IHQPKHIDEADLARKRLIFDEFFYLQLGRLY----QMLEGLGTQFEKEGLLDKYRKPRLN 490
IH PK + A RL F+E F++QL L+ + L+ G F+K G
Sbjct: 209 IHFPKDVASLKKAESRLKFEELFFIQLQLLHNKQLRELKFKGHLFDKVG----------- 257
Query: 491 AAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAF 550
EG ++ +++L P+ LT++Q I EI D ++ + MNRL+QGDVG GKTVVA
Sbjct: 258 ----EGVNTFYREIL---PFKLTNAQKRVIKEIRLDTQRGIQMNRLVQGDVGSGKTVVAL 310
Query: 551 LACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRM 610
++ + +GYQA M PTE+LA QHYE ++ LL + K+A+LTGS+ KQ
Sbjct: 311 MSMLLASDNGYQACMMAPTEILARQHYESIISLLKD-----RLVKVAILTGSSTKKQRTQ 365
Query: 611 IRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSG 670
+ L+ G+I +++GTH+LI +KV F +L + ++DEQ RFGV QR R K
Sbjct: 366 LHAALEAGEINILVGTHALIEDKVVFKSLGMVVIDEQHRFGVEQRARLWRK--------- 416
Query: 671 MAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT-YI 729
+ PH+L M+ATPIPRTLA+ +YGD+ ++ I +LP GR PI+T ++
Sbjct: 417 -------------NAIPPHILVMTATPIPRTLAMTMYGDLDVSVIDELPAGRKPIETRHL 463
Query: 730 IEGN 733
EG
Sbjct: 464 YEGQ 467
>gi|402815971|ref|ZP_10865563.1| ATP-dependent DNA helicase RecG [Paenibacillus alvei DSM 29]
gi|402507011|gb|EJW17534.1| ATP-dependent DNA helicase RecG [Paenibacillus alvei DSM 29]
Length = 682
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 155/536 (28%), Positives = 248/536 (46%), Gaps = 97/536 (18%)
Query: 207 LDKC-ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIG 264
L +C ++ + G+S +L G T+ LL +FP Y D + +L DG+ G
Sbjct: 4 LKQCPVTMIKGVSASKQQELHAFGISTVADLLDYFPYRYDDFHLRSLSELKDGEKVTVEG 63
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
++S+ ++ S L V E D ++ + + L +
Sbjct: 64 RVMSAPVLQRFGRKSRLSCKVMVE---------DWLITATWFNRHYLREQLTQ------- 107
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP-- 382
G + ++GK ++ R + V E S R +GR
Sbjct: 108 ---------------GREIVLTGK---------WDQRRLQMTVSTSE--FSDRGEGRKNT 141
Query: 383 -YPIYPSKGGLNASLLRDTIARALQ----ALPANFDPVPKEITQEFGLLCLFDAYMGIHQ 437
P+Y G + + +R TI +ALQ A+P + +P E+ + + L+ A +H
Sbjct: 142 LQPVYSVGGKITQAWMRKTITQALQQFGEAIP---ELMPPELMRRYRLMPRKQAVRAMHM 198
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGW 497
P+ +E AR+R++++E QL K + + R + E
Sbjct: 199 PQDAEEGKQARRRMVYEELLLFQL---------------KLHVFRAVTRERADGVVHEVG 243
Query: 498 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
++ ++ +R+LP+ LT Q A+++I+ D++ P MNRLLQGDVG GKTVVA +A +
Sbjct: 244 NATIREFVRSLPFELTDGQKKAVTDILHDMRAPTCMNRLLQGDVGSGKTVVAAVALYATV 303
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
+GYQ A MVPTE+LA QH L KL + H ++ LLTGS ++ + + LQ
Sbjct: 304 RAGYQGALMVPTEILAEQHMRSLTKLF-----EPHGIEVGLLTGSLSGRKRKDLLASLQM 358
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
G + +++GTH+LI + V + L L + DEQ RFGV QR K
Sbjct: 359 GMVDIMVGTHALIQDDVHYRKLGLVVTDEQHRFGVNQRSILRRK---------------- 402
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN 733
M P VL M+ATPIPRTLA+ +GDM ++ I + P GR IK+Y ++ +
Sbjct: 403 -------GMNPDVLLMTATPIPRTLAITAFGDMDVSSIRERPAGRKAIKSYWVKHD 451
>gi|154504978|ref|ZP_02041716.1| hypothetical protein RUMGNA_02488 [Ruminococcus gnavus ATCC 29149]
gi|153794861|gb|EDN77281.1| ATP-dependent DNA helicase RecG [Ruminococcus gnavus ATCC 29149]
Length = 686
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 167/536 (31%), Positives = 251/536 (46%), Gaps = 93/536 (17%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
IS + G+ ++ G +T+ LL ++PRTY ++ I IGEI
Sbjct: 7 ISVLKGVGEKTEQLFIKAGVHTIGDLLAYYPRTYDIYEDP----------ISIGEI---- 52
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTR---FTSI 327
+ G + + + I G + + +K +I K GT + +
Sbjct: 53 --QEGKTVTVIGAIFGR-------------IQVSQNKKMQITTLYLKDMTGTLKVIWFRM 97
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNI---DVLKDEDDLSLRAKGRPYP 384
PFL++ G+ G + + G++ +R + M I +E +++ P
Sbjct: 98 PFLRNTLGR---GGVITLRGRI--VRKKDALVMEHPEIFYPSASYEEKRNTMQ------P 146
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
+Y GL + ++ +A+AL+ + + +P+E+ + LL A GIH P+ +E
Sbjct: 147 VYALTAGLTNNAVKKAVAQALEQVEGIREFLPEELICRYHLLDRRTAMEGIHFPETKEEF 206
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
ARKR +F+EF L +M+ K R+ R Y +
Sbjct: 207 YEARKRFVFEEFLIFVLS--LRMI--------------KEREDRAKNHYGFCDQPKVDEF 250
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
L ALPY LT +Q EI+ D+ M+RL+QGDVG GKT+VA LA M +GYQ+A
Sbjct: 251 LYALPYELTGAQKKVWQEILRDISGESVMSRLVQGDVGSGKTIVALLALMYTGLNGYQSA 310
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKP-KIALLTGSTPVKQSRMIRKDLQTGDITLV 623
M PTE+LA QHYE+ + M E P K LLTGS K R ++ G+ +V
Sbjct: 311 MMAPTEVLARQHYEN----ISGMLEAYGIPLKTELLTGSMTAKAKREAYARIEAGEADIV 366
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
IGTH+LI EKV++ L L + DEQ RFGV QR K
Sbjct: 367 IGTHALIQEKVQYQNLALVVTDEQHRFGVKQRETLAGK---------------------- 404
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYEN 739
+ PH+L MSATPIPRTLA+ LYGD+ ++ I +LP R+PIK ++ + GY N
Sbjct: 405 -GVLPHILVMSATPIPRTLAIILYGDLDISVIDELPKNRLPIKNCVV---DTGYRN 456
>gi|402299456|ref|ZP_10819062.1| ATP-dependent DNA helicase RecG [Bacillus alcalophilus ATCC 27647]
gi|401725374|gb|EJS98662.1| ATP-dependent DNA helicase RecG [Bacillus alcalophilus ATCC 27647]
Length = 682
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 159/529 (30%), Positives = 255/529 (48%), Gaps = 93/529 (17%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGE 265
++++ + V G+ + +QL+ +T+ LL +FP Y D Q DL D ++ E
Sbjct: 4 IINQSVMGVHGVGEEAVNQLKTLRIFTVGDLLEYFPFRYEDYQIR--DLHDVKH----DE 57
Query: 266 IISSRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKK---IYLHLKKFFRG 321
++ G+ A S F G+KK + L + +
Sbjct: 58 RVTVVGVVHAPASIRFF------------------------GKKKSRLTVRLLVNQVLLT 93
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAK-G 380
F + P+LK+ K ++GE V+GK ++ + + E + K
Sbjct: 94 VTFFNQPYLKN---KFQLGEEATVTGK-----------WDQHRMTITASEARFGQQQKEQ 139
Query: 381 RPYPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPK 439
R P+Y G L L+ ++ Q + + +P + +++ L +A+ +H P+
Sbjct: 140 RLVPVYSVAGKLTTKSLKRYVSNGFQQFSGHIQENIPPFLLEKYKLPSRREAFYQLHFPQ 199
Query: 440 HIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSS 499
+ AR+R++++EF QL K K ++ + + +E ++
Sbjct: 200 SKEALKHARRRMVYEEFLLFQL---------------KMQAFRKGQREQSSGKAIEWPTA 244
Query: 500 LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
++ + ALP+ LT +Q I+EI D++ P MNRLLQGDVG GKTVVA + +I +
Sbjct: 245 EVRQFIEALPFPLTDAQKKVINEIRNDIQSPYRMNRLLQGDVGAGKTVVAAICMYAMIKA 304
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
G+QAA MVPTE+LA QH + L LL+ + + LLTGS K+ R + ++L+ G
Sbjct: 305 GHQAALMVPTEILAEQHVQSLQSLLEPFD-----VTVRLLTGSVKGKKRRELLEELKLGT 359
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
I +V+GTH+LI ++V+F L L I DEQ RFGV QR SK D
Sbjct: 360 IDIVVGTHALIQDEVQFKNLALVITDEQHRFGVEQRRALRSK-------------GED-- 404
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTY 728
P VL M+ATPIPRTLA++++GDM ++ I LP GR I+TY
Sbjct: 405 --------PDVLFMTATPIPRTLAISVFGDMDVSIIDQLPAGRKAIETY 445
>gi|260890455|ref|ZP_05901718.1| ATP-dependent DNA helicase RecG [Leptotrichia hofstadii F0254]
gi|260859697|gb|EEX74197.1| ATP-dependent DNA helicase RecG [Leptotrichia hofstadii F0254]
Length = 689
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 167/539 (30%), Positives = 261/539 (48%), Gaps = 97/539 (17%)
Query: 214 VPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN----AQIDLDDGQYFIFIGEIIS- 268
+ G++K + G +TL LL+ FPR Y + N A+I D ++ I G +++
Sbjct: 16 IKGVTKTNIPKFRKLGVFTLYDLLYFFPRAYENRSNHKKIAEILAD--EFVILQGTVVNV 73
Query: 269 -SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
++ +KAG T V++ DSG + ++ + RF
Sbjct: 74 VNQYIKAG------------------RTMFRAVLSDDSGMIELVWFN-------NRFVK- 107
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLK-DEDDLSLRAKGRPYPIY 386
G H +G+ + V GKVR + + N + K + ++ + + PIY
Sbjct: 108 ------NGIH-IGDEIAVYGKVRKT-----VKFQLVNPEYKKISQASFDMQEQKQILPIY 155
Query: 387 PSKGGLNASLLRDTIARALQ----ALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHID 442
PS L +R + AL L N +PKE Q+ LL +A + IH P++ +
Sbjct: 156 PSTESLRQQAIRKVMENALMDYGYLLQEN---LPKEFLQKEKLLGRKEAVLNIHFPENEE 212
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
+ ARKR + +E L++G L +DK K N +E SL
Sbjct: 213 KQSKARKRFMLEEILLLEMGILQNRFS-----------VDKANK---NIYKLEDNKSLVS 258
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
K ++ L Y LT +Q I EI +LK +NRL+QGDVG GKT+V+F+ + ++ + YQ
Sbjct: 259 KFIKGLDYDLTKAQKRVIKEIYSELKAGKIVNRLIQGDVGSGKTIVSFIMLLYMVENNYQ 318
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
M PTE+LATQHY ++ N++ ++ LLTGS K+ + +++ G + +
Sbjct: 319 GVIMAPTEILATQHYLGIVDEFMNLD-----IRVELLTGSVKGKKKEKLLNEIKEGLVDI 373
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
VIGTHSLI + V F L L ++DEQ RFGV QR +D
Sbjct: 374 VIGTHSLIEDNVIFKNLGLIVIDEQHRFGVTQRKLL----------------------RD 411
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVY 741
++A +++ MSATPIPR+LAL +YGD+ ++ I +LP GR PIKT I+ NE + +Y
Sbjct: 412 KGNLA-NLIVMSATPIPRSLALTIYGDLDVSIIDELPAGRSPIKTKWIQ-NEIDRQKMY 468
>gi|213963738|ref|ZP_03391988.1| ATP-dependent DNA helicase RecG [Capnocytophaga sputigena Capno]
gi|213953618|gb|EEB64950.1| ATP-dependent DNA helicase RecG [Capnocytophaga sputigena Capno]
Length = 704
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 165/545 (30%), Positives = 260/545 (47%), Gaps = 107/545 (19%)
Query: 204 EPLLDKCISCVPGLSKRLYHQLEN-CGFYTLRKLLHHFPRTYAD---------LQNAQID 253
E +L IS + G+ + L+ G Y + LL+ FP Y D LQN +
Sbjct: 4 ENILHTSISHLRGVGAQRAELLKTELGIYEYQDLLNLFPNRYIDRTKFYKINELQNNNAE 63
Query: 254 LDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYL 313
+ +G+I++ R +++ S +V + +T T E+V
Sbjct: 64 VQ------LVGKIVNLRTVESAHQKS--NRLVATFVDETGTM---ELV------------ 100
Query: 314 HLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDD 373
+F+G LK + K+ E + GK+ + M +D+L +
Sbjct: 101 ----WFKG--------LKWLRDSLKINEPYVIFGKLNFFGGT--FSMPHPEMDLL---SE 143
Query: 374 LSLRAKGRPYPIYPS-----KGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLC 427
P+YPS K + ++R + + + NF + +P I L+
Sbjct: 144 FKKTGHNSIQPVYPSTEKLAKRNITNRVMRQLVQTVFEEIGYNFTENLPDTILTAMNLIS 203
Query: 428 LFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYR-- 485
+A IH P + A RL F+E FY+Q+ Q ++ LL K +
Sbjct: 204 KQEAMCNIHFPTNQSLLTKASIRLKFEELFYIQV------------QLVRKNLLHKQKFQ 251
Query: 486 -KP--RLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVG 542
+P ++ A+M ++ LP+ LT++Q A+ EI D+ MNRLLQGDVG
Sbjct: 252 GQPFKKVGDAFMNFYNY-------HLPFPLTNAQKRALKEIRADVGSNAQMNRLLQGDVG 304
Query: 543 CGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGS 602
GKT+VA + + + + QA M PTE+LA QHY+ + +LL N +ALLTGS
Sbjct: 305 SGKTIVALMTMLLAVDNHCQACLMAPTEILANQHYQTISELLKNT-----GITVALLTGS 359
Query: 603 TPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKL 662
+ K+ R++ + LQ+G+++++IGTH+L+ EKV+F L LAI+DEQ RFGV QR + K
Sbjct: 360 SKTKERRILDEQLQSGELSILIGTHALLEEKVQFQNLGLAIIDEQHRFGVEQRAKLWRK- 418
Query: 663 YYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGR 722
+ PH+L M+ATPIPRTLA+++YGD+ ++ I +LPPGR
Sbjct: 419 ---------------------NTIPPHILVMTATPIPRTLAMSVYGDLDVSVIDELPPGR 457
Query: 723 IPIKT 727
PIKT
Sbjct: 458 KPIKT 462
>gi|189462953|ref|ZP_03011738.1| hypothetical protein BACCOP_03655 [Bacteroides coprocola DSM 17136]
gi|189430235|gb|EDU99219.1| ATP-dependent DNA helicase RecG [Bacteroides coprocola DSM 17136]
Length = 699
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 159/440 (36%), Positives = 222/440 (50%), Gaps = 74/440 (16%)
Query: 305 SGQKKKIYLHLKKFFRGTRFTSIPF---LKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMR 361
G+++++ H F GT + + LK I GK+K E V GK N +
Sbjct: 76 EGRQRRLVGH---FSDGTGIVDLVWFQGLKFIMGKYKANEEYIVFGKPTIF--NGRINIA 130
Query: 362 EYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPAN-FDPVPKEIT 420
+ID ++ L+L G P Y + + S L + AL+ L N F + KEI
Sbjct: 131 HPDIDPAQE---LTLSTMGLQ-PYYNTTEKMKRSNLN---SHALEKLMKNLFGALQKEII 183
Query: 421 QE---------FGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGL 471
+E + L+ L DA IH P++ D A+ RL F+E FY+QL L E
Sbjct: 184 EETLSPQLVDHYRLMPLTDALYNIHFPQNPDLLRRAQYRLKFEELFYVQLNILRYTKERR 243
Query: 472 ----GTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDL 527
G F K G + N Y + LP+ LT +Q I E+ D+
Sbjct: 244 NKFRGLVFGKVGEI-------FNTFYSQN-----------LPFQLTGAQKRVIKEMRRDM 285
Query: 528 KQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNM 587
MNRLLQGDVG GKT+VA + + + +GYQA M PTE+LATQHYE + + L M
Sbjct: 286 GSGRQMNRLLQGDVGSGKTLVALMTMLIALDNGYQACMMAPTEILATQHYETICRFLAGM 345
Query: 588 EEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQ 647
++ LLTG+ K+ I KDL TGD+ ++IGTH++I + V FS+L L ++DEQ
Sbjct: 346 -----NVRVELLTGTVKGKRRETILKDLVTGDVHILIGTHAVIEDTVNFSSLGLVVIDEQ 400
Query: 648 QRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALY 707
RFGV QR + +K + P PHVL M+ATPIPRTLA+ LY
Sbjct: 401 HRFGVAQRAKLWAK---------------NTCP-------PHVLVMTATPIPRTLAMTLY 438
Query: 708 GDMSLTQITDLPPGRIPIKT 727
GD+ ++ I +LPPGR PI+T
Sbjct: 439 GDLDVSVIDELPPGRKPIQT 458
>gi|421739412|ref|ZP_16177722.1| ATP-dependent DNA helicase RecG [Streptomyces sp. SM8]
gi|406692185|gb|EKC95896.1| ATP-dependent DNA helicase RecG [Streptomyces sp. SM8]
Length = 734
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 166/550 (30%), Positives = 258/550 (46%), Gaps = 88/550 (16%)
Query: 205 PLLDKCISCV--PGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN----AQIDLDDGQ 258
P LD+ + V P +K + L+ +T+ LLHH+PR YA+ A + LD+
Sbjct: 5 PALDENLKKVVGPPTAKVMADHLD---LHTVGDLLHHYPRRYAERGELTTLADLPLDE-- 59
Query: 259 YFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKF 318
V V +++D V ++G+ K++ + +
Sbjct: 60 -----------------------HVTVVAQVSDAR------VHTFNAGRGKRLEVTITDG 90
Query: 319 FRGTRFTSIPFLKSIEGKHK---VGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDE--DD 373
R + F + + H+ G +GKV N+ ++ +L+ + +D
Sbjct: 91 SGSLRL--VFFGRGVHKPHQDLQPGTRAMFAGKVSVF--NHRLQLAHPAYQLLRGDGAED 146
Query: 374 LSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYM 433
+S A G P+YP+ L + + + L + DP+P + + GLL L +A
Sbjct: 147 VSSWA-GALIPLYPATAKLESWKIAKAVDAVLPSADEALDPLPDALREGRGLLPLPEALR 205
Query: 434 GIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAY 493
IH+P+ + AR RL +DE F LQ+ L + EG L PR A
Sbjct: 206 KIHRPQSQADVAQARARLKWDEAFVLQVA--------LARRRHAEGQLSAV--PRRPAP- 254
Query: 494 MEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLAC 553
L LP++LT Q EI DL PM+RLLQG+VG GKT+VA A
Sbjct: 255 ----DGLLTAFDARLPFTLTEGQQKVSREIFDDLATDHPMHRLLQGEVGSGKTMVALRAM 310
Query: 554 MEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEED------KHKPKIALLTGSTPVKQ 607
+ V+ SG QAA + PTE+LA QH+ + +++ ++ + +H K+ LLTGS
Sbjct: 311 LAVVDSGGQAAMLAPTEVLAQQHHRSITEMMGDLADGGTLGAPEHATKVVLLTGSMTAAA 370
Query: 608 SRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSM 667
R DL TG+ +VIGTH+LI + V+F L L +VDEQ RFGV QR +K
Sbjct: 371 RRKALLDLATGEAGIVIGTHALIEDTVQFHELGLVVVDEQHRFGVEQRDALRAK------ 424
Query: 668 SSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
G K++ PH+L M+ATPIPRT+A+ ++GD+ + + LP GR PI T
Sbjct: 425 ----------GHTKEEAR-TPHLLVMTATPIPRTVAMTVFGDLETSVLDQLPAGRSPIST 473
Query: 728 YIIEGNEKGY 737
+++ +K +
Sbjct: 474 HVVPAQDKPH 483
>gi|329963080|ref|ZP_08300860.1| ATP-dependent DNA helicase RecG [Bacteroides fluxus YIT 12057]
gi|328529121|gb|EGF56051.1| ATP-dependent DNA helicase RecG [Bacteroides fluxus YIT 12057]
Length = 698
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 171/515 (33%), Positives = 250/515 (48%), Gaps = 95/515 (18%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLE-VI 284
+ G Y+L LL++FP Y D I S R + + L+ I
Sbjct: 25 KELGIYSLHDLLYYFPYKYVDR----------------SRIYSIREIDGTMPYIQLKGEI 68
Query: 285 VGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIE---GKHKVGE 341
+G E T+G+ G+++++ H F GT + + + I+ GK+KV +
Sbjct: 69 LGFE------TAGE-------GRQRRLIAH---FSDGTGIVDLVWFQGIKYLVGKYKVHQ 112
Query: 342 FVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG-RPYPIYPSK---GGLNASLL 397
V GK A N + +ID+ +L L + G +PY K LN+ +
Sbjct: 113 EYIVFGKPTAF--NGRINIAHPDIDL---ASELKLSSMGMQPYYSTTDKMKRSSLNSHAI 167
Query: 398 RDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEF 456
++ +Q L + + I E L+ L +A IH P + D A+ RL F+E
Sbjct: 168 EKMMSTVIQQLSEPLSETLSAAILNEHHLMPLTEALTHIHFPVNSDLLRKAQYRLKFEEL 227
Query: 457 FYLQLGRLY----QMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSL 512
FY+QL L + + G FEK G + N Y R LP+ L
Sbjct: 228 FYVQLNILRYAKDRQRKYRGYIFEKVGEI-------FNTFYS-----------RNLPFEL 269
Query: 513 TSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELL 572
T++Q + EI D+ MNRLLQGDVG GKT+VA ++ + + +G+QA M PTE+L
Sbjct: 270 TNAQKRVLKEIRRDVGSGKQMNRLLQGDVGSGKTLVALMSMLMALDNGFQACMMAPTEIL 329
Query: 573 ATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAE 632
A QHYE + +LL M+ ++ LLTGS K+ I L TGDI ++IGTH++I +
Sbjct: 330 ANQHYETIRELLYGMD-----VRVELLTGSIKGKRREAILAGLLTGDIHILIGTHAVIED 384
Query: 633 KVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLA 692
V F++L L ++DEQ RFGV QR R +K + P PHVL
Sbjct: 385 TVNFASLGLVVIDEQHRFGVAQRARLWTK---------------NVQP-------PHVLV 422
Query: 693 MSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
M+ATPIPRTLA+ LYGD+ ++ I +LPPGR PI T
Sbjct: 423 MTATPIPRTLAMTLYGDLDVSVIDELPPGRKPIAT 457
>gi|408492413|ref|YP_006868782.1| ATP-dependent DNA helicase RecG [Psychroflexus torquis ATCC 700755]
gi|408469688|gb|AFU70032.1| ATP-dependent DNA helicase RecG [Psychroflexus torquis ATCC 700755]
Length = 700
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 131/352 (37%), Positives = 192/352 (54%), Gaps = 50/352 (14%)
Query: 383 YPIYPS-----KGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIH 436
YP+YPS K G++ ++ T+ L NF + +P I + L+ +A + +H
Sbjct: 150 YPVYPSTEKLSKRGISNRMI-STLMFGLLEQSGNFSETLPSSIIADLKLISKTEAMINVH 208
Query: 437 QPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEK-EGLLDKYRKPRLNAAYME 495
P+ + A+ RL F+EFFY+QL Q+L K +G K NA Y
Sbjct: 209 FPQSSELLAKAQFRLKFEEFFYIQL----QLLRKNAVHKSKIKGFRFKQVGEYFNAFYNT 264
Query: 496 GWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
LP+ LT +Q + EI DL MNRLLQGDVG GKT+VA ++ +
Sbjct: 265 -----------VLPFELTGAQKRVLKEIRKDLGSNAQMNRLLQGDVGSGKTIVALMSMLI 313
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
I +G+QA M PTE+LA+QHYE + +L + + ++ +LTGST K +++ + L
Sbjct: 314 AIDNGFQACLMAPTEILASQHYEGISELCEPI-----GVQVEILTGSTKKKDRKVLHERL 368
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
Q G++ ++IGTH+LI + V+F + LA++DEQ RFGV QR + K
Sbjct: 369 QNGELHILIGTHALIEDTVKFKNIGLAVIDEQHRFGVAQRAKLWKK-------------- 414
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PHVL M+ATPIPRTLA++LYGD+ ++ I +LPPGR PIKT
Sbjct: 415 --------NTLPPHVLVMTATPIPRTLAMSLYGDLDISVIDELPPGRKPIKT 458
>gi|395790946|ref|ZP_10470405.1| ATP-dependent DNA helicase RecG [Bartonella alsatica IBS 382]
gi|395409242|gb|EJF75841.1| ATP-dependent DNA helicase RecG [Bartonella alsatica IBS 382]
Length = 702
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 148/393 (37%), Positives = 201/393 (51%), Gaps = 57/393 (14%)
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY--PIYPSKGGLNASLL 397
G V VSGKV R N M V D ++K P P+YPS GL+A +L
Sbjct: 122 GRKVVVSGKVE--RFNGQLSM------VHPDHIVSIEQSKQIPLIEPVYPSTAGLSAKML 173
Query: 398 RDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL---ARKRLIFD 454
R I AL+ +P + + + + ++ A IH P + ++ +L ARKRL +D
Sbjct: 174 RCAIQNALEYIPLLPEWIEENVKKQQNFPSFSTALRRIHTPINPNDLNLKSAARKRLAYD 233
Query: 455 EFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTS 514
E QL LG L + + L+ + TKKLL+ALP+ LTS
Sbjct: 234 ELLACQLA--------LG--------LVRLKTKSLSGTSRPTTGTYTKKLLKALPFQLTS 277
Query: 515 SQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLAT 574
Q AI +I DL P PM RLLQGDVG GKT+VA +A M++ + Q+A M PTE+LA
Sbjct: 278 GQTKAIQDIANDLASPEPMLRLLQGDVGAGKTIVALMAMMQIAENSGQSALMAPTEVLAR 337
Query: 575 QHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKV 634
QH+ + L +K + ALLTG K I D+ +G +T++IGTH+LI E V
Sbjct: 338 QHFATIAPL-----AEKIGLQTALLTGREKGKLRTNILNDISSGQVTIIIGTHALIQENV 392
Query: 635 EFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMS 694
++ L LAI+DEQ RFGV QR +K + P +L M+
Sbjct: 393 AYNNLALAIIDEQHRFGVHQRLALTTKGH-----------------------KPDMLVMT 429
Query: 695 ATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
ATPIPRTL L +GDM ++QIT+ P GR PI T
Sbjct: 430 ATPIPRTLVLTAFGDMDVSQITEKPIGRQPITT 462
>gi|271969202|ref|YP_003343398.1| ATP-dependent DNA helicase RecG [Streptosporangium roseum DSM
43021]
gi|270512377|gb|ACZ90655.1| ATP-dependent DNA helicase RecG [Streptosporangium roseum DSM
43021]
Length = 723
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 160/516 (31%), Positives = 244/516 (47%), Gaps = 77/516 (14%)
Query: 230 FYTLRKLLHHFPRTYADLQNAQIDLDDGQ---YFIFIGEIISSRGMKA---GCSFSFLEV 283
T+ LL H+PR YA+ + DLDD Q + +GE+ +R M+ ++LEV
Sbjct: 26 LRTVGDLLRHYPRRYAE-RGELTDLDDLQVDEHVTVVGEV--TRAMRKPMRNKGGTWLEV 82
Query: 284 IVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFV 343
EVV+ G++ KIYL FF T + E + + G
Sbjct: 83 ---------------EVVD---GRRSKIYL---SFFGKTSHIA-------ESRLRPGARG 114
Query: 344 CVSGKVRAMRSNN--HYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTI 401
+GKV A + +++ ++ + + + PIYP+ + +R +
Sbjct: 115 MFAGKVGAFGQGDKRRWQLSHPEFEMFDETEAGAEEFAAALVPIYPAGKDVTPWAIRRAL 174
Query: 402 ARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQL 461
L + DP+P E+ L L +A + +H+P+ + ARKRL FDE F LQ
Sbjct: 175 GVVLDTMGPLDDPLPAELRARHKLPGLAEALLAVHRPRDHGDVTRARKRLKFDEAFLLQA 234
Query: 462 GRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAIS 521
L + + R PR + L R LP+ LT Q S
Sbjct: 235 VLLQRRMAAASWPATP-------RPPRGDG--------LLADFDRRLPFRLTEGQQSVGE 279
Query: 522 EIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLL 581
E+ DL PM+RLLQG+VG GKTVVA A ++V+ +G QA + PTE+LA QH+ +
Sbjct: 280 EVSADLALAHPMHRLLQGEVGAGKTVVALRAMLQVVDAGGQAVLLAPTEVLAQQHHRSIS 339
Query: 582 KLLDNMEEDKH--KPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSAL 639
+L ++ +ALLTGS R D +G +V+GTH+++ E+V+F+ L
Sbjct: 340 AMLGDLAAGGMFGGTVVALLTGSLGAAARRSAMLDAASGAAGIVVGTHAVLQERVQFADL 399
Query: 640 RLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIP 699
L +VDEQ RFGV QR K G + PHVL M+ATPIP
Sbjct: 400 GLVVVDEQHRFGVEQRDALREKA---------------GGGR------PHVLVMTATPIP 438
Query: 700 RTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
RT+A+ ++GD++++ ++ LP GR PI T+++ EK
Sbjct: 439 RTVAMTVFGDLTVSTLSQLPSGRAPITTHVVPAAEK 474
>gi|409097623|ref|ZP_11217647.1| ATP-dependent DNA helicase RecG [Pedobacter agri PB92]
Length = 701
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 175/550 (31%), Positives = 274/550 (49%), Gaps = 105/550 (19%)
Query: 204 EPLLDKCISCVPGLSKRLYHQLE-NCGFYTLRKLLHHFPRTYAD----LQNAQIDLDDGQ 258
+ +LD I + G+ L+ + +T + +L H+P Y D + QI D Q
Sbjct: 3 QSILDTPIEFIKGVGPSRADVLKKDLSLFTFQDMLAHYPFRYIDRTKYFKINQIH-PDSQ 61
Query: 259 YFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKF 318
Y IG +IS + +VG D T V ++G + ++
Sbjct: 62 YIQIIGRVISKK-------------VVG----DKRTKRIVAVFKDETGIMELVW------ 98
Query: 319 FRGTRFTSIPFLKSIEGKHKVGEFVCVSGK---VRAMRSNNHYEMREYNIDVLKDEDDLS 375
F S LK +E VG GK S +H EM Y + +L+
Sbjct: 99 -----FQS---LKWVEDHITVGTAYVAFGKPTLFNGTFSISHPEMELYQNRSV-GRGNLT 149
Query: 376 LRAKGRPYPIYPS-----KGGLNASLLRDTIARAL-QALPANFDPVPKEITQEFGLLCLF 429
L+ PIY S K L++ ++ IA L Q +P + +P+ I ++ L
Sbjct: 150 LQ------PIYSSTEKLKKFTLDSKGIQRLIAGLLDQVIPQVTENLPQYIIDKYQLPDKR 203
Query: 430 DAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLY----QMLEGLGTQFEKEGLLDKYR 485
A + IH PK+ + + A++RL F+E FY+QL L+ + L+ G +F+K G
Sbjct: 204 MALLNIHFPKNEKDLNAAQRRLKFEELFYIQLQLLHNKQLRQLKFKGARFDKVG------ 257
Query: 486 KPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGK 545
++N Y E LP+ LT++Q + EI D ++ V MNRL+QGDVG GK
Sbjct: 258 -EKVNRFYKE-----------FLPFELTNAQKRVVKEIRIDTQRGVQMNRLVQGDVGSGK 305
Query: 546 TVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLL-DNMEEDKHKPKIALLTGSTP 604
T VA ++ + +GYQA M PTE+LA QHY + +L+ D++ K+A+LTG+T
Sbjct: 306 TAVALMSMLLANDNGYQACMMAPTEILARQHYASITELVTDDL------VKVAILTGNTK 359
Query: 605 VKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYY 664
K+ ++ + L+ G+I ++IGTH+LI +KV+F L L ++DEQ RFGV QR +KL+
Sbjct: 360 KKERTILHEQLENGEIDILIGTHALIEDKVKFKNLGLVVIDEQHRFGVEQR----AKLWR 415
Query: 665 TSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIP 724
++ + PH+L M+ATPIPRTLA+ LYGD+ ++ + +LP GR P
Sbjct: 416 KNI------------------IPPHILVMTATPIPRTLAMTLYGDLDVSIMDELPAGRKP 457
Query: 725 IKT-YIIEGN 733
I+T ++ EG
Sbjct: 458 IETRHLFEGQ 467
>gi|187250617|ref|YP_001875099.1| ATP-dependent DNA helicase RecG [Elusimicrobium minutum Pei191]
gi|186970777|gb|ACC97762.1| ATP-dependent DNA helicase RecG [Elusimicrobium minutum Pei191]
Length = 691
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 163/514 (31%), Positives = 237/514 (46%), Gaps = 72/514 (14%)
Query: 225 LENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQ-YFIFIGEIISSRGMKAGCSFSFLEV 283
E G T+ +L ++PRTY D + ++ Q +F+G + ++ + A F
Sbjct: 17 FERLGINTVSDILRYYPRTYQDRRPGVLNEFCSQGLVVFLGRVARTQSIPAKSVHIFKAF 76
Query: 284 IVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFV 343
+ D+ NI+ KK + FF+ RF + S++ K+G +V
Sbjct: 77 L-----------EDDKGNNIECTWFKK-----RTFFKA-RFDP---MGSLKKDFKMGVWV 116
Query: 344 CVSGKVRAMRS--NNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTI 401
V GK S +N + EY + SL R P+Y GL R +
Sbjct: 117 WVIGKREDKESFISNKITVEEY----YSADKQESLIHVNRLTPVYSLTQGLTGKFFRTAV 172
Query: 402 ARALQA-LPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQ 460
AL+ L + +P + ++ LL A IH P + E D ARKRL+++EF L
Sbjct: 173 HFALEKYLFEEHESLPVSLVKKRSLLGAKQALKAIHFPSNTPELDAARKRLVYEEFLLLT 232
Query: 461 LGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAI 520
G+ + + + N Y + LT L + LT +Q I
Sbjct: 233 SAW---------------GIKKQQKTVQKNYTYHIKTNLLTP-FKNNLGFELTHAQKKVI 276
Query: 521 SEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHL 580
+EI D++ +PM RLLQGDVG GKT VA A + + + +QAA M PTE+LA QH+ +
Sbjct: 277 NEIFKDMQSTLPMTRLLQGDVGSGKTTVALSAMLLAVENKFQAALMAPTEILAEQHFITI 336
Query: 581 LKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALR 640
L ++ K ALLT S K + DL G I +++GTHS+I + V F L+
Sbjct: 337 TNFLKGLD-----VKTALLTSSVKGKTKEKLLADLAEGKIDILVGTHSIIEDNVVFKNLK 391
Query: 641 LAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPR 700
+ +VDEQ RFGV QR R +K M L M+ATPIPR
Sbjct: 392 MTVVDEQHRFGVEQRTRLRNKAKEIDM-----------------------LTMTATPIPR 428
Query: 701 TLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
TLALA YGD+ ++ IT+LPPGR PI T+ I E
Sbjct: 429 TLALAFYGDLEVSAITELPPGRKPITTFSITEGE 462
>gi|336432514|ref|ZP_08612349.1| ATP-dependent DNA helicase RecG [Lachnospiraceae bacterium
2_1_58FAA]
gi|336018851|gb|EGN48588.1| ATP-dependent DNA helicase RecG [Lachnospiraceae bacterium
2_1_58FAA]
Length = 686
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 169/538 (31%), Positives = 250/538 (46%), Gaps = 97/538 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
IS + G+ ++ G +T+ LL ++PRTY ++ I IGEI +
Sbjct: 7 ISVLKGVGEKTEQLFIKAGVHTIGDLLAYYPRTYDIYEDP----------ISIGEIQEGK 56
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIY---LHLKKFFRGTR--FT 325
T T +G I Q KK+ L+LK + +
Sbjct: 57 ---------------------TVTVTGAIFGRIQVSQNKKMQITTLYLKDMTGTLKVIWF 95
Query: 326 SIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNI---DVLKDEDDLSLRAKGRP 382
+PFL++ G+ G + + G++ +R + M I +E +++
Sbjct: 96 RMPFLRNTLGR---GGVITLRGRI--VRKKDALVMEHPEIFYPSASYEEKRNTMQ----- 145
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHID 442
P+Y GL + ++ +A+AL+ + + +P+E+ + LL A GIH P+ +
Sbjct: 146 -PVYALTAGLTNNAVKKAVAQALEQVEGIREFLPEELICRYHLLDRRTAMEGIHFPETKE 204
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
E ARKR +F+EF L +M+ K R+ R Y
Sbjct: 205 EFYEARKRFVFEEFLIFVLS--LRMI--------------KEREDRAKNHYGFCDQPKVD 248
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
+ L ALPY LT +Q EI+ D+ M+RL+QGDVG GKT+VA LA M +GYQ
Sbjct: 249 EFLYALPYELTGAQKKVWQEILRDISGESVMSRLVQGDVGSGKTIVALLALMYTGLNGYQ 308
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKP-KIALLTGSTPVKQSRMIRKDLQTGDIT 621
+A M PTE+LA QHYE+ + M E P K LLTGS K R ++ G+
Sbjct: 309 SAMMAPTEVLARQHYEN----ISGMLEAYGIPLKTELLTGSMTAKAKREAYARIEAGEAD 364
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+VIGTH+LI EKV++ L L + DEQ RFGV QR K
Sbjct: 365 IVIGTHALIQEKVQYQNLALVVTDEQHRFGVKQRETLAGK-------------------- 404
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYEN 739
+ PH+L MSATPIPRTLA+ LYGD+ ++ I +LP R+PIK ++ + GY N
Sbjct: 405 ---GVLPHILVMSATPIPRTLAIILYGDLDISVIDELPKNRLPIKNCVV---DTGYRN 456
>gi|225848441|ref|YP_002728604.1| ATP-dependent DNA helicase RecG [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644626|gb|ACN99676.1| ATP-dependent DNA helicase RecG [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 801
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 134/366 (36%), Positives = 197/366 (53%), Gaps = 55/366 (15%)
Query: 384 PIYPSKG-------GLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIH 436
P+Y +G G + LR + + ++ D +P I +++ L A IH
Sbjct: 235 PVYSLRGDSSIKTTGQTINHLRRGMFKIVEKFSDVKDYIPNFILEKYNFPPLSKALKFIH 294
Query: 437 QPKH---IDE----ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRL 489
P IDE ++ +KRLIFDE F LQL + Y ++ LL R P
Sbjct: 295 HPDENTDIDELNNFQNIHQKRLIFDELFLLQLAQKY-----------RKALLQ--RNPSY 341
Query: 490 NAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVA 549
N E + +++ + LP+ LT++Q I EI+ DL++ VPMNR++ GDVG GKTVVA
Sbjct: 342 NIKVKEDF---LQEVEKNLPFQLTNAQKRTIKEILSDLEKEVPMNRMVLGDVGSGKTVVA 398
Query: 550 FLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSR 609
++ + V + YQ+A M PTE+LA QHY + L +D +IALLTGS + +
Sbjct: 399 AISSLAVALNNYQSAVMAPTEILAQQHYNNFKNFLKPYLKDY---EIALLTGSLSSTEKK 455
Query: 610 MIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSS 669
I K +++G + +VIGTH+L+ EK++F L L +VDEQ RFGV QR
Sbjct: 456 KIYKAVESGIVKVVIGTHALLEEKLKFKDLALVVVDEQHRFGVEQR-------------- 501
Query: 670 GMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYI 729
S + PHV+ M+ATPIPRTLALA YGD+ ++++ +LP GR P+KT I
Sbjct: 502 --------KSLIERSEKKPHVMVMTATPIPRTLALAYYGDLDISKLDELPKGRKPVKTVI 553
Query: 730 IEGNEK 735
+ E+
Sbjct: 554 LFEKER 559
>gi|359148741|ref|ZP_09181848.1| ATP-dependent DNA helicase RecG [Streptomyces sp. S4]
Length = 734
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 166/550 (30%), Positives = 258/550 (46%), Gaps = 88/550 (16%)
Query: 205 PLLDKCISCV--PGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN----AQIDLDDGQ 258
P LD+ + V P +K + L+ +T+ LLHH+PR YA+ A + LD+
Sbjct: 5 PALDENLKKVVGPPTAKVMADHLD---LHTVGDLLHHYPRRYAERGELTTLADLPLDE-- 59
Query: 259 YFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKF 318
V V +++D V ++G+ K++ + +
Sbjct: 60 -----------------------HVTVVAQVSDAR------VHTFNAGRGKRLEVTITDG 90
Query: 319 FRGTRFTSIPFLKSIEGKHK---VGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDE--DD 373
R + F + + H+ G +GKV N+ ++ +L+ + +D
Sbjct: 91 SGSLRL--VFFGRGVHKPHQDLQPGTRAMFAGKVSVF--NHRLQLAHPAYQLLRGDGAED 146
Query: 374 LSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYM 433
+S A G P+YP+ L + + + L + DP+P + + GLL L +A
Sbjct: 147 VSSWA-GALIPLYPATAKLESWKIAKAVDAVLPSADEALDPLPGALREGRGLLPLPEALR 205
Query: 434 GIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAY 493
IH+P+ + AR RL +DE F LQ+ L + EG L PR A
Sbjct: 206 KIHRPQSQADVAQARARLKWDEAFVLQVA--------LARRRHAEGQLSAV--PRRPAP- 254
Query: 494 MEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLAC 553
L LP++LT Q EI DL PM+RLLQG+VG GKT+VA A
Sbjct: 255 ----DGLLTAFDARLPFTLTEGQQKVSREIFDDLATDHPMHRLLQGEVGSGKTMVALRAM 310
Query: 554 MEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEED------KHKPKIALLTGSTPVKQ 607
+ V+ SG QAA + PTE+LA QH+ + +++ ++ + +H K+ LLTGS
Sbjct: 311 LAVVDSGGQAAMLAPTEVLAQQHHRSITEMMGDLADGGTLGAPEHATKVVLLTGSMTAAA 370
Query: 608 SRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSM 667
R DL TG+ +VIGTH+LI + V+F L L +VDEQ RFGV QR +K
Sbjct: 371 RRKALLDLATGEAGIVIGTHALIEDTVQFHELGLVVVDEQHRFGVEQRDALRAK------ 424
Query: 668 SSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
G K++ PH+L M+ATPIPRT+A+ ++GD+ + + LP GR PI T
Sbjct: 425 ----------GHTKEEAR-TPHLLVMTATPIPRTVAMTVFGDLETSVLDQLPAGRSPIST 473
Query: 728 YIIEGNEKGY 737
+++ +K +
Sbjct: 474 HVVPAQDKPH 483
>gi|359423234|ref|ZP_09214374.1| ATP-dependent DNA helicase RecG [Gordonia amarae NBRC 15530]
gi|358241404|dbj|GAB03956.1| ATP-dependent DNA helicase RecG [Gordonia amarae NBRC 15530]
Length = 745
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 173/546 (31%), Positives = 254/546 (46%), Gaps = 66/546 (12%)
Query: 215 PG--LSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID----LDDGQYFIFIGEIIS 268
PG L K+ L + T+ +LL + PR Y +Q +D L+ G++ +G I +
Sbjct: 8 PGVLLDKKTTAGLASLNITTVGELLRYPPRRY--MQQGHLDQRERLEAGEWTTVVGTITA 65
Query: 269 SRGMKAGCSFS-FLEVIVGCEIADTETTSGD-EVVNIDSGQKKKIYLHLK-KFFRGTRFT 325
S+ + FL+V+V E T + + ++ L K K+FR
Sbjct: 66 SQMISMKRKHGQFLKVVVDDGHQRVEATFFNPRAIRRALQPGARVMLAGKVKYFREQVQL 125
Query: 326 SIPFLKSI-EGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY- 383
S P I +G G+ V S EM Y D E+ A RP
Sbjct: 126 SHPQWAVIPDGDGDAGKVVG---------SAMAAEM--YTADTELAEEGHETAAFDRPII 174
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
P+YP+ + + + + R L LP D + + GLL +A IH P D+
Sbjct: 175 PMYPASSEIQTWTIWNAVRRVLAQLPPQPDVLDDAWRRSRGLLTADEALRKIHLPDTEDD 234
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
AR+RL FDE +Q + + G +R+ + + L K
Sbjct: 235 ITAARERLKFDEALAIQTVLAQRRIAG-------------HREQSVACPPVS--DGLEAK 279
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
LL+ LP+ LT Q ++EI DL PM+RLLQG+VG GKT+V+ L + V+ +G+Q
Sbjct: 280 LLQRLPFELTDGQKEVVAEIGDDLASTAPMSRLLQGEVGSGKTLVSLLTMLRVVDNGHQC 339
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEE------DKHKPKIALLTGSTPVKQSRMIRKDLQT 617
M PTE+LA QHY + +L ++ E + KIALLTGS K R D+ T
Sbjct: 340 VLMAPTEVLAAQHYRTIRSMLGDLAEAGELTAAEGATKIALLTGSMKTKGKRQTLLDVVT 399
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
G+ +VIGTH+L+ EKV F L + +VDEQ RFGV QR
Sbjct: 400 GEAGIVIGTHALLEEKVSFFDLGMVVVDEQHRFGVEQRDVLR------------------ 441
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE-GNEKG 736
G KD H PH L M+ATPIPRT+A+ +GD+ + + +LP GR PI T ++ G+ K
Sbjct: 442 GRGKDGVH--PHFLVMTATPIPRTVAMTAFGDLDTSTLRELPRGRQPISTTVVPMGSSKW 499
Query: 737 YENVYK 742
+ V++
Sbjct: 500 VDRVWE 505
>gi|226185028|dbj|BAH33132.1| ATP-dependent DNA helicase RecG [Rhodococcus erythropolis PR4]
Length = 758
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 155/524 (29%), Positives = 253/524 (48%), Gaps = 67/524 (12%)
Query: 232 TLRKLLHHFPRTYADL--QNAQIDLDDGQYFIFIGEIISSRGMK-AGCSFSFLEVIVGCE 288
T+ LL H+P YA + A+ + +G++ I + S+ +K L V + +
Sbjct: 33 TVEDLLRHYPHRYASAGKELAEKEPPEGEHITIIARVASAAVVKMKNRPGQMLRVSLATD 92
Query: 289 IADTETT--SGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIP-FLKSIEGKHKVGEFVCV 345
+ T + +V ++ + ++ K+FRG + P +L I + +VGE V
Sbjct: 93 SQTVDVTFFNPQKVRHVIKPGVRAMFSGTVKYFRGKWSLTHPSYL--ILPEPRVGEEDSV 150
Query: 346 --------SGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLL 397
+G + + N E ++ V D +L P+YP+ + + +
Sbjct: 151 VPLASIKGAGDLAGLARANQDPGAELDLSVF----DRAL------IPLYPATREVESWTI 200
Query: 398 RDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFF 457
+ + L L +P+P E E G + L +A +H P ++ + ++ RL FDE
Sbjct: 201 MRCVRQVLDQLDPIEEPLPAETRAEHGFIGLDEALRTVHLPDTKEDIERSQDRLRFDEAL 260
Query: 458 YLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQL 517
LQL + M ++ R+ A + + LP++LT Q
Sbjct: 261 SLQL--VLAMRRHDNSE-------------RVAPACAPVAGGIADQFEEMLPFTLTEGQQ 305
Query: 518 SAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHY 577
+ EI DL +P PM+RLLQG+VG GKT+VA A ++V+ +GYQ A + PTE+LA QH
Sbjct: 306 AVAEEISSDLARPHPMSRLLQGEVGSGKTIVALRAMLQVVDAGYQCALLAPTEVLANQHA 365
Query: 578 EHLLKLL------DNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIA 631
L K++ + +H +IALLTGS PV R + TGD +VIGTH+LI
Sbjct: 366 RSLRKMMGPLAAGGELGSAEHSTRIALLTGSLPVAAKRAALLEAVTGDAGIVIGTHALIQ 425
Query: 632 EKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVL 691
+ VEF L + +VDEQ RFGV QR + S+ + ++PH+L
Sbjct: 426 DNVEFFNLGMVVVDEQHRFGVEQRDQLRSRAR--------------------EGLSPHLL 465
Query: 692 AMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
M+ATPIPRT+A+ + GD+ ++ + +LP GR PIK+ ++ +K
Sbjct: 466 VMTATPIPRTIAMTVLGDLEVSTLRELPRGRTPIKSSVVPAKQK 509
>gi|118587509|ref|ZP_01544933.1| ATP-dependent DNA helicase RecG [Oenococcus oeni ATCC BAA-1163]
gi|421186076|ref|ZP_15643471.1| ATP-dependent DNA helicase RecG [Oenococcus oeni AWRIB418]
gi|118431960|gb|EAV38702.1| ATP-dependent DNA helicase RecG [Oenococcus oeni ATCC BAA-1163]
gi|399967720|gb|EJO02186.1| ATP-dependent DNA helicase RecG [Oenococcus oeni AWRIB418]
Length = 676
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 172/540 (31%), Positives = 249/540 (46%), Gaps = 101/540 (18%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNA-QIDLDDGQYFIFIGEI-- 266
I+ + G+ ++ L+ G + LL ++P Y DL++ DDGQ F G +
Sbjct: 6 SITELSGVGQKRAEILKQLGILNIEDLLTYYPFRYDDLESRLPSQTDDGQKVTFKGMVSS 65
Query: 267 ---ISSRGMKAG-CSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGT 322
IS G K +F L +G + NI
Sbjct: 66 QPTISRFGYKKSRIAFRLL---IGHD-------------NI-----------------SV 92
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+LK + ++G+ + + G A+ H ++ I + E+D SL A
Sbjct: 93 SFFNQPWLKE---QIEIGKEMAIFGTYDAV----HEALKGQRI--IHAEND-SLAA---- 138
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
IYPS ++ ++ I A D +P+ + + LL +H P
Sbjct: 139 --IYPSNQAIHQKTIQQLIENAYAKYADQINDIIPRRLMLAYRLLSRKKQIHDMHFPDSA 196
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
+ A LAR+ F+EFF Q+ RL M G +E +E S +
Sbjct: 197 ENAKLARRSAAFEEFFIFQM-RLQLMRISAGKNRGRE---------------IEYNSEIL 240
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
+ LPYSLT +Q I EI+ DLK+P+ MNRLLQGDVG GKTVVA +A + +G
Sbjct: 241 NDFIAKLPYSLTDAQKKVIQEILLDLKRPIHMNRLLQGDVGSGKTVVAAIAMLACYSAGL 300
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
QAA MVPTE+LA QH +L L + +I LLT R I DL++G+I
Sbjct: 301 QAAIMVPTEILAQQHAINLSNL---YQSAGLNLRIELLTSGLKAAARRQILADLESGEID 357
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+V+GTH+LI V F L LA++DEQ RFGV QR R
Sbjct: 358 IVVGTHALIQADVHFHNLGLAVIDEQHRFGVKQRARLR---------------------- 395
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVY 741
+Q P +LAM+ATPIPRTLA+ YG+M ++ I LP GR PI T ++ N+ ++NV+
Sbjct: 396 -EQGQNPDILAMTATPIPRTLAITAYGEMDVSTIDQLPNGRRPIITKWVKSNQ--FDNVF 452
>gi|300775765|ref|ZP_07085626.1| DNA helicase RecG [Chryseobacterium gleum ATCC 35910]
gi|300505792|gb|EFK36929.1| DNA helicase RecG [Chryseobacterium gleum ATCC 35910]
Length = 695
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 154/537 (28%), Positives = 252/537 (46%), Gaps = 100/537 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENC-GFYTLRKLLHHFPRTYADLQN----AQIDLDDGQYFI 261
L+ I V G+ ++N G T+ +L+ +P Y D +Q+ + Q
Sbjct: 3 LETSIEYVKGIGPERAKLIKNVLGLSTVEDMLNFYPIRYLDKSKIYKISQLQEESSQEIQ 62
Query: 262 FIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRG 321
G+I + ++ G +T N D+G ++ K+ +
Sbjct: 63 LKGKITQVQEIQTG-----------------KTKRLSAKFNDDTGSMDLVWFQYSKWLK- 104
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVL-KDEDDLSLRAKG 380
+P V + V + GK+ N + M I+ K E D L+
Sbjct: 105 ---EQLP----------VNKEVYIFGKINVF--NRQFSMPHPEIEAEEKKEGDTRLK--- 146
Query: 381 RPYPIYPS-----KGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMG 434
PIYPS K GLN ++ + + +P + P + + F + A++
Sbjct: 147 ---PIYPSSEKLTKRGLNQRFFQNALRNICKEIPGLIEENFPDYLMKTFKFMSRQHAFLN 203
Query: 435 IHQPKHIDEADLARKRLIFDEFFYLQLG----RLYQMLEGLGTQFEKEGLLDKYRKPRLN 490
+H PK ++ + A RL F+E F+ QLG +L+ + G F P +
Sbjct: 204 VHFPKDMEHFNKADYRLKFEESFFFQLGYGLKKLHHKTQSHGNPF-----------PIIG 252
Query: 491 AAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAF 550
+ + + + LP+ LT++Q + EI D+K+ + MNRLLQGDVG GKT+VA
Sbjct: 253 DHFNDFYEN-------HLPFDLTNAQKRVLKEIRMDMKRSIQMNRLLQGDVGSGKTMVAL 305
Query: 551 LACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRM 610
L + + +G+Q+ M PTE+LA QHY + +LL +K I LLTGST + R+
Sbjct: 306 LTMLIAMDNGFQSCLMAPTEILAQQHYNGIKELL-----EKTGINIRLLTGSTKASERRV 360
Query: 611 IRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSG 670
I ++L+ G +++++GTH+++ +KV+F L LAI+DEQ RFGV QR + +K
Sbjct: 361 IHEELENGTLSILVGTHAVLEDKVKFKNLGLAIIDEQHRFGVAQRAKLWAK--------- 411
Query: 671 MAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PH+L M+ATPIPRTLA++ Y D+ ++ I ++P GR PI T
Sbjct: 412 -------------NKIPPHILIMTATPIPRTLAMSFYSDLDVSVIDEMPVGRKPIIT 455
>gi|15901531|ref|NP_346135.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae TIGR4]
gi|111657513|ref|ZP_01408256.1| hypothetical protein SpneT_02001279 [Streptococcus pneumoniae
TIGR4]
gi|225857310|ref|YP_002738821.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae P1031]
gi|418130844|ref|ZP_12767727.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA07643]
gi|418187675|ref|ZP_12824198.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47360]
gi|418230468|ref|ZP_12857067.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae EU-NP01]
gi|419478337|ref|ZP_14018160.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA18068]
gi|419480535|ref|ZP_14020339.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA19101]
gi|419500240|ref|ZP_14039934.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47597]
gi|421243629|ref|ZP_15700141.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2081074]
gi|421247966|ref|ZP_15704444.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2082170]
gi|18279285|sp|Q54900.2|RECG_STRPN RecName: Full=ATP-dependent DNA helicase RecG
gi|14973191|gb|AAK75775.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae TIGR4]
gi|225725262|gb|ACO21114.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae P1031]
gi|353802168|gb|EHD82468.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA07643]
gi|353849660|gb|EHE29665.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47360]
gi|353885349|gb|EHE65138.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae EU-NP01]
gi|379564849|gb|EHZ29844.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA18068]
gi|379569704|gb|EHZ34671.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA19101]
gi|379599548|gb|EHZ64331.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47597]
gi|395606278|gb|EJG66385.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2081074]
gi|395612840|gb|EJG72874.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2082170]
gi|429316540|emb|CCP36247.1| ATP-dependent DNA helicase [Streptococcus pneumoniae SPN034156]
Length = 671
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 163/531 (30%), Positives = 257/531 (48%), Gaps = 97/531 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK+
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKY 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ QML+ + + GL+ + + ++ A +
Sbjct: 197 LAEYKQALRRIKFEELFYFQMQ--LQMLKS-ENRVQGSGLVLNWSQEKVTAVKV------ 247
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
+LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +G
Sbjct: 248 ------SLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTAG 301
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+
Sbjct: 302 YQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGEA 354
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 355 DLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN-- 398
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 -------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|334131186|ref|ZP_08504952.1| ATP-dependent DNA helicase recG [Methyloversatilis universalis
FAM5]
gi|333443816|gb|EGK71777.1| ATP-dependent DNA helicase recG [Methyloversatilis universalis
FAM5]
Length = 678
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 130/362 (35%), Positives = 192/362 (53%), Gaps = 46/362 (12%)
Query: 381 RPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPK- 439
R P+YP+ GL+ + LR I AL+ D +P+ + + + L+ A +H+P+
Sbjct: 132 RLTPVYPATAGLSQASLRRAIDDALERTDLA-DSLPEALRRHYALVPFGAAVQALHRPRP 190
Query: 440 -----HIDEA-DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAY 493
+DE A +R+ FDE QL ++ + R +
Sbjct: 191 GESLRDLDERLAPAWRRIKFDELLAQQLS------------LKRAHAARRNRDAPVLPQP 238
Query: 494 MEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLAC 553
+ SL + L+ LP++LT +Q A +EI DL QP PM RLLQGDVG GKTVVA LAC
Sbjct: 239 ADTDGSLIDRFLQQLPFALTGAQARAWAEIAADLSQPYPMQRLLQGDVGSGKTVVAALAC 298
Query: 554 MEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRK 613
+ + +GYQAAFM PTE+LA QH+ L L + ++A L+GS V++ R +++
Sbjct: 299 LRAVEAGYQAAFMAPTEILAEQHFRKLADWLAPL-----GIQVAWLSGSLKVREKRAMKE 353
Query: 614 DLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAM 673
+ +G + +GTH+LI + V+F+ L +A+VDEQ RFGV QR +K S
Sbjct: 354 AIASGAAPIAVGTHALIEDAVDFARLGVAVVDEQHRFGVRQRLALRAKAGDVS------- 406
Query: 674 VNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN 733
PH L MSATPIPRTLA++ Y D+ ++ I +LPPGR P+ T +I
Sbjct: 407 --------------PHQLMMSATPIPRTLAMSFYADLDVSVIDELPPGRTPVLTKLIAAA 452
Query: 734 EK 735
+
Sbjct: 453 RR 454
>gi|421271108|ref|ZP_15721962.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae SPAR48]
gi|395867322|gb|EJG78446.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae SPAR48]
Length = 671
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 163/531 (30%), Positives = 257/531 (48%), Gaps = 97/531 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK+
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKY 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ QML+ + + GL+ + + ++ A +
Sbjct: 197 LAEYKQALRRIKFEELFYFQMQ--LQMLKS-ENRVQGSGLVLNWSQEKVTAVKV------ 247
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
+LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +G
Sbjct: 248 ------SLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTAG 301
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+
Sbjct: 302 YQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGEA 354
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 355 DLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN-- 398
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 -------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|335049189|ref|ZP_08542194.1| putative ATP-dependent DNA helicase RecG [Megasphaera sp. UPII
199-6]
gi|333763897|gb|EGL41316.1| putative ATP-dependent DNA helicase RecG [Megasphaera sp. UPII
199-6]
Length = 563
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 132/350 (37%), Positives = 188/350 (53%), Gaps = 46/350 (13%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALP--ANFDPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
P+Y GL LR+ I AL + + E+ + + L++AY IH P +
Sbjct: 27 PVYGLTEGLRQKELRNFIRDALNYMEEHSGLTEADTEVPFLYPTMSLYEAYRTIHFPDSL 86
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
+ + AR++L F E F LQLG L + EK +K + A G L
Sbjct: 87 EAREKARRQLAFQELFDLQLGL------ALRRRGEK-------KKAGIKCAPNGG---LL 130
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
+ +++ LP+ LT Q +A +I D++ VPM RL+QGDVG GKT VA LA +++ +GY
Sbjct: 131 QAVVKNLPFLLTQGQTNAFLDIQSDMESEVPMQRLVQGDVGSGKTAVAALALAKIVENGY 190
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q A M PTE+LATQH E L +L + K ALLTG K+ + + +++ G I
Sbjct: 191 QGALMAPTEILATQHAEELARLFQGI-----PIKTALLTGRIGAKERQRVLQEIADGSIQ 245
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+VIGTH+L+ E V+F+ L L + DEQ RFGV QR K
Sbjct: 246 VVIGTHALLQEDVQFAHLGLVVTDEQHRFGVKQRAALQEK-------------------- 285
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
APH L M+ATPIPRTLAL++YGD+ ++ I +LPPGR P+KTY ++
Sbjct: 286 ---GRAPHGLFMTATPIPRTLALSVYGDLDVSSIRELPPGRKPVKTYAVK 332
>gi|42519402|ref|NP_965332.1| ATP-dependent DNA helicase RecG [Lactobacillus johnsonii NCC 533]
gi|41583690|gb|AAS09298.1| ATP-dependent DNA helicase RecG [Lactobacillus johnsonii NCC 533]
Length = 679
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 169/524 (32%), Positives = 252/524 (48%), Gaps = 101/524 (19%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGEIIS- 268
++ + G+ + L + G T+ LL +FP Y DL+ +D ++DGQ + G +++
Sbjct: 12 VTELKGVGAKTATALASLGINTIYDLLFYFPFRYDDLETIPLDQIEDGQKVLLKGMVVTD 71
Query: 269 ---SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFT 325
SR SF ++ + +I +VN F
Sbjct: 72 PFVSRFGYRKTRLSF-KIKIDHDII---------MVN---------------------FF 100
Query: 326 SIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPI 385
+ P+LK K + G+ V V GK + R + + + K + + PI
Sbjct: 101 NQPWLKD---KVESGKEVAVYGKYQVARQS----FSGFKLVAEKKDSGFA--------PI 145
Query: 386 YPSKGGLNASLLRDTIARALQ-ALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
Y L + L+ I ALQ A+ + +P I +++ LL +H PK+ +EA
Sbjct: 146 YSVNRHLKQNKLQKLIDLALQEAINEVGETIPASIREKYRLLSDRVLVEKMHHPKNGNEA 205
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
+AR+ IF EFF Q+ +L Q+L + G+ KY + K+L
Sbjct: 206 KIARRSAIFREFFLFQM-QLAQLLSQRNE--DAPGVEKKYD------------LAAVKEL 250
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
+ +P+ L+ Q ++EI DL M RLLQGDVG GKTVVA A + +GYQAA
Sbjct: 251 IEEIPFELSDDQKKVVNEIFADLHSKRQMRRLLQGDVGSGKTVVAVFAIYAAVTAGYQAA 310
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKP---KIALLTGSTPVKQSRMIRKDLQTGDIT 621
MVPTE+LA QH+ + +LL KP ++ALLTG T + + I ++L G I
Sbjct: 311 LMVPTEILAQQHFAKIDELL--------KPLGVRVALLTGDTKDLEKKEIYRELADGTIN 362
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+VIGTH+LI ++V F L L I+DEQ RFGV QR T + G
Sbjct: 363 VVIGTHALIQKEVHFKNLGLVIIDEQHRFGVNQRN--------TLIKKG----------- 403
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
AP +LAM+ATPIPRTLAL +YGDM++++I LP GR P+
Sbjct: 404 ----DAPDILAMTATPIPRTLALTVYGDMAVSEIRHLPKGRKPV 443
>gi|421290257|ref|ZP_15741007.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA54354]
gi|421305649|ref|ZP_15756303.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA62331]
gi|395887942|gb|EJG98956.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA54354]
gi|395904607|gb|EJH15521.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA62331]
Length = 671
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 164/531 (30%), Positives = 256/531 (48%), Gaps = 97/531 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S N ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLNGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ QML+ + + GL+ + + ++ A
Sbjct: 197 LAEYKQALRRIKFEELFYFQMQ--LQMLKS-ENRVQGSGLVLDWSQEKVTAVKA------ 247
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
+LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +G
Sbjct: 248 ------SLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTAG 301
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+
Sbjct: 302 YQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGEA 354
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 355 DLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN-- 398
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 -------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|406969319|gb|EKD93995.1| hypothetical protein ACD_28C00010G0007 [uncultured bacterium]
Length = 683
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 165/517 (31%), Positives = 237/517 (45%), Gaps = 99/517 (19%)
Query: 225 LENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFIGEI--ISSRGMKAGCSFSF 280
L G +T+ H+FPR+Y D + +L Q + G++ I R +G +
Sbjct: 26 LRYLGLHTIEDFFHYFPRSYRDQTDLSTVAELRTDQLNVVQGKLSGIFHRTTHSGKFMTL 85
Query: 281 LEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVG 340
+++T+ EV+ + HLK+ R G
Sbjct: 86 AHF--------SDSTASVEVMWFNQP-------HLKQLLRN------------------G 112
Query: 341 EFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAK----GRPYPIYPSKGGLNASL 396
+ V ++GK + + H I ++ + LR K R P+Y + +
Sbjct: 113 DEVILTGKAKW---DGH------KITLMSPRYE-PLRVKQLHTARLVPVYHEHNRVTSKW 162
Query: 397 LRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEF 456
+R+ I L+ D +P I GL+ A +H PK+ ++ AR+RL FDE
Sbjct: 163 IREKINPLLKGTALLEDYMPSWIVAGDGLMPYTLAVRTVHDPKNEEKLFAARQRLAFDEL 222
Query: 457 FYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQ 516
F LQL L + LE +E + RK L+ + + LP+ LT +Q
Sbjct: 223 FLLQLNALQKRLEF------RESSRNNQRKMELDPEW-------KPSFYQQLPFPLTQAQ 269
Query: 517 LSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQH 576
+ EI DL+ P PM RLLQGDVG GKTVVA I +G+Q M PTE+LA QH
Sbjct: 270 QRVMQEIWEDLRSPYPMMRLLQGDVGSGKTVVAAFGLFHSIKAGFQGVLMAPTEILAKQH 329
Query: 577 YEHLLKLLDNMEEDKHKP---KIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEK 633
+E KLL KP I LTGS Q M+ + + TG + LVIGTH+LI E+
Sbjct: 330 FESFSKLL--------KPFGFNIQFLTGSLSGSQKEMVLRQIATGTVDLVIGTHALIQER 381
Query: 634 VEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAM 693
V F+ L L +VDEQ RFGV QR R + GS PH+L +
Sbjct: 382 VCFAKLGLVVVDEQHRFGVKQRERLQEQ----------------GS--------PHILHL 417
Query: 694 SATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
SATPIPRTLA+ +YGD ++ + +LPPGR I T ++
Sbjct: 418 SATPIPRTLAMVVYGDQDVSILDELPPGRQTIITRLV 454
>gi|402831680|ref|ZP_10880357.1| ATP-dependent DNA helicase RecG [Capnocytophaga sp. CM59]
gi|402281067|gb|EJU29759.1| ATP-dependent DNA helicase RecG [Capnocytophaga sp. CM59]
Length = 700
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 140/374 (37%), Positives = 203/374 (54%), Gaps = 58/374 (15%)
Query: 379 KGRPYPIYPS-----KGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAY 432
+G +YPS K G++ ++R + + +F + +P E+ Q LL +A
Sbjct: 146 QGNIQAVYPSTEKLTKKGISQRVMRKFLENLFTEVGKHFQETLPHEMIQPLRLLPKGEAL 205
Query: 433 MGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDK----YRKPR 488
+ IH P+ + A+ RL +E FY+QL Q ++ L+K Y P+
Sbjct: 206 LQIHFPQSQELLAKAQFRLKVEELFYIQL------------QLIQKNYLNKKLQGYVFPK 253
Query: 489 LNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVV 548
+ + + + LP+ LT++Q I EI D+ MNRLLQGDVG GKT+V
Sbjct: 254 VGDYFNTFYH-------QYLPFPLTNAQKRVIKEIRNDVATGAQMNRLLQGDVGAGKTIV 306
Query: 549 AFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQS 608
A A + + + +QA M PTE+LA QHYE + LL M+ +IALLTGST K+
Sbjct: 307 ALFAMLLALDNQFQACLMAPTEILAQQHYESIASLLAPMD-----IRIALLTGSTKTKER 361
Query: 609 RMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMS 668
R I + L++G + +V+GTH+L+ +KV+F L LAI+DEQ RFGV QR SKL++ +
Sbjct: 362 REIHEGLESGQLQIVVGTHALLEDKVKFQNLGLAIIDEQHRFGVEQR----SKLWHKN-- 415
Query: 669 SGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTY 728
+ PHVL MSATPIPRTLA++LYGD+ ++ I +LPPGR PIKT
Sbjct: 416 ----------------QLPPHVLIMSATPIPRTLAMSLYGDLDVSVIDELPPGRKPIKT- 458
Query: 729 IIEGNEKGYENVYK 742
I E VY+
Sbjct: 459 -IHQYETHRARVYQ 471
>gi|319405607|emb|CBI79230.1| ATP-dependent DNA helicase [Bartonella sp. AR 15-3]
Length = 701
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 150/396 (37%), Positives = 203/396 (51%), Gaps = 57/396 (14%)
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY--PIYPSKGGLNASLL 397
G+ V +SGKV R M + V ++ D P+ PIYPS GL+ L
Sbjct: 121 GKKVIISGKVE--RFKGQLSMIHPDHIVFHEQLD------QMPFIEPIYPSTAGLSTKTL 172
Query: 398 RDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL---ARKRLIFD 454
R + +AL+ +P+ + + + I +E + IH P + D+ L ARKRL +D
Sbjct: 173 RRAMQKALEYIPSLPEWIEESIKKEHNFSSFPVSLRRIHAPINPDDLALESTARKRLAYD 232
Query: 455 EFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTS 514
EFF Q+ LG K L +P G+ TKKLL ALP+ LTS
Sbjct: 233 EFFANQIA--------LGLVRLKTKLFSGTSRPP------TGF--YTKKLLEALPFQLTS 276
Query: 515 SQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLAT 574
Q+ +I +I DL P PM RLLQGDVG GKT+VA +A ++ + Q+A MVPTE+LA
Sbjct: 277 GQIQSIKDIANDLASPTPMLRLLQGDVGAGKTIVALMAIAQIAENSGQSALMVPTEVLAR 336
Query: 575 QHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKV 634
QH+ + L +K + LLTG K I + +G+ +++IGTH+LI E V
Sbjct: 337 QHFATITPL-----AEKIGLQTVLLTGREKGKVRANILDTILSGEASIIIGTHALIQENV 391
Query: 635 EFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMS 694
++ L LAI+DEQ RFGV QR K G+ P +L M+
Sbjct: 392 TYNNLALAIIDEQHRFGVQQRLTLTEK----------------GN-------KPDILVMT 428
Query: 695 ATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
ATPIPRTL L YGDM ++QITD P GR PIKT I
Sbjct: 429 ATPIPRTLVLTSYGDMDVSQITDKPTGRQPIKTATI 464
>gi|383826414|ref|ZP_09981541.1| ATP-dependent DNA helicase RecG [Mycobacterium xenopi RIVM700367]
gi|383332714|gb|EID11189.1| ATP-dependent DNA helicase RecG [Mycobacterium xenopi RIVM700367]
Length = 740
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 161/537 (29%), Positives = 258/537 (48%), Gaps = 87/537 (16%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNAQIDLDD----GQYFIFIGEIIS--SRGMKAGCSFS 279
E G T++ LL H+PRTY + + D+ G++ + + SR MK
Sbjct: 22 EAFGIRTVQDLLRHYPRTYVEGAAVRGVGDERPPAGEHITLVDTVTGAVSRPMKKRPKEK 81
Query: 280 FLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYL-HLKK-----------FFRGTRFTSI 327
+L + +G SG V K+ ++ L K +FRGT +
Sbjct: 82 YLVITIG---------SGRNRVTATFFNVKQWFVDQLAKGTRIMLSGEVSYFRGTMQLTH 132
Query: 328 P---FLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
P L S +GK +++RS H ++ + +VL+ + + YP
Sbjct: 133 PDFLILNSPDGKDH---------GSKSLRSIAHAS-KKISGEVLQSAFERAF------YP 176
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
IYP+ + + + + + L L DP+P+ + E+GL+ A IH + E
Sbjct: 177 IYPASTKVQSWDIYACVRQVLAVLDPVPDPLPESVVAEYGLISEDQALHAIHLSESESER 236
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
ARKRL FDE LQ + ++ + + G PR + L ++L
Sbjct: 237 QRARKRLTFDEAVGLQ----WALVTRRHGELSESG---PSAPPRSDG--------LAQEL 281
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
L+ LP+ LT Q + + +L PMNRLLQG+VG GKT+VA LA ++++ +GYQ A
Sbjct: 282 LQQLPFELTVGQREVLEVLRRELAATRPMNRLLQGEVGSGKTIVAVLAMLQMVDAGYQCA 341
Query: 565 FMVPTELLATQHYEHLLKLL------DNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+ PTE+LA QH + ++L + ++ ++A+LTGS Q + +R ++ +G
Sbjct: 342 LLAPTEVLAAQHVLSINEVLGPLAMGGQLGGAENATRVAMLTGSMSPAQKKQVRAEITSG 401
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+V+GTH+L+ + VEF L + +VDEQ RFGV QR + +K
Sbjct: 402 QAGIVVGTHALLQDAVEFHRLGMVVVDEQHRFGVEQRDQLRAK----------------- 444
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
+P + PH+L M+ATPIPRT+AL +YGD+ + + +LP GR PI T I N+K
Sbjct: 445 APAG---ITPHLLVMTATPIPRTVALTVYGDLETSTLRELPRGRQPITTTAIFVNDK 498
>gi|392988140|ref|YP_006486733.1| ATP-dependent DNA helicase RecG [Enterococcus hirae ATCC 9790]
gi|392335560|gb|AFM69842.1| ATP-dependent DNA helicase RecG [Enterococcus hirae ATCC 9790]
Length = 678
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 172/529 (32%), Positives = 256/529 (48%), Gaps = 99/529 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L+ ++ + G+ + L + G T+ LL ++P Y D+Q + ++ D + G
Sbjct: 4 LNDPVTMLAGVGAKRADSLASLGIQTIEDLLTYYPFRYEDIQERNLNEILDQEKVTLKGL 63
Query: 266 IISSRGM-KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
++S M + G + L+ + + A V N+ F
Sbjct: 64 VVSPPVMSRFGYKKNRLQFRMMQDHA---------VFNVS-------------------F 95
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDE--DDLSLRAKGRP 382
+ P+LK K + E + V GK A R + + + +L + DD S
Sbjct: 96 FNQPYLKD---KVILSEEIAVYGKWDAKRKSLN------GMKILGSQAVDDFS------- 139
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHI 441
PIY + + L D I R + + +P + +++ LL A +H PK+
Sbjct: 140 -PIYHVNKSIRQTTLVDLIRRGFEEYGDLIEENLPNGLVEKYRLLDRPTAVKSMHFPKNH 198
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQM-LEGL--GTQFEKEGLLDKYRKPRLNAAYMEGWS 498
+E A++R++F+EFF L+QM L+GL + E G+ Y RL
Sbjct: 199 EENHQAKRRIVFEEFF------LFQMRLQGLKKSEKAETNGIEILYDIQRL--------- 243
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
K+ ++ LP+ LT +Q +EI DL+ P M RLLQGDVG GKT+VA +A +
Sbjct: 244 ---KQFIQKLPFELTDAQKRVTNEICRDLRSPQHMQRLLQGDVGSGKTIVAAIALYAAVT 300
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+G+Q A MVPTE+LA QH E LL+L D E K+ALLTGST K+ R + + L+ G
Sbjct: 301 AGFQGALMVPTEILAQQHMESLLQLFDAQE-----VKLALLTGSTKAKERRELLELLEQG 355
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+I +V+GTH+LI E VEF L L I DEQ RFGV QR K +
Sbjct: 356 EIDIVVGTHALIQEGVEFQHLGLVITDEQHRFGVNQRKVLREKGW--------------- 400
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLA+ YG+M ++ I +LP GRIPI+T
Sbjct: 401 --------RPDVLFMTATPIPRTLAITAYGEMDVSVIDELPAGRIPIET 441
>gi|365828021|ref|ZP_09369854.1| hypothetical protein HMPREF0975_01637 [Actinomyces sp. oral taxon
849 str. F0330]
gi|365264531|gb|EHM94337.1| hypothetical protein HMPREF0975_01637 [Actinomyces sp. oral taxon
849 str. F0330]
Length = 605
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 174/548 (31%), Positives = 258/548 (47%), Gaps = 94/548 (17%)
Query: 182 PALPNESSTSSEVGSLPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFP 241
P+ P+ S+ + GS +L++ ++ + L KR QL G T LL P
Sbjct: 2 PSSPDRSTRAPRPGS-------ADVLERPVTRL--LGKRTAAQLAKQGVETGADLLRLLP 52
Query: 242 R---TYADLQNAQIDLDDGQYFIFIGEII--SSRGMKAGCSFSFLEVIVGCEIADTETTS 296
R T+ +L + + L G+ +I+ SSR ++G + + +E V T+ S
Sbjct: 53 RRYDTWGELTDMRT-LAKGEQATIQAQIVRASSRRTRSGRAPAIMEATV------TDGVS 105
Query: 297 GDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNN 356
+VV + + + R TR G V +SGKV R
Sbjct: 106 TMDVVQFGAAGQMRA--------RATRLAP-------------GTTVLMSGKVGLHRGRR 144
Query: 357 HYEM-REYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPV 415
R Y +D L + + +L A RP PIYP L + ++A+A++ + D V
Sbjct: 145 QLSNPRLYVLDELDEAERDALLA--RPMPIYPGTEALPSW----SVAKAVRTV---LDQV 195
Query: 416 ---------PKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQ 466
P E+ + GL+ + AY +H+P+ D+ ARKRL +E LQ+
Sbjct: 196 GPDDVPDPLPDELRRSCGLVDAYTAYRWVHRPEDADQWKAARKRLRHEEALILQVA---- 251
Query: 467 MLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWD 526
+ L + + + E SL L ALPY LT Q+ EI D
Sbjct: 252 --------LAQRRALHEATRTAVAWPEPEATGSLRADLDAALPYELTVGQVRVGREIAAD 303
Query: 527 LKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDN 586
L + VPM RLLQGDVG GKT+VA A ++V+G+G QAA + PTE+LA QH+ L LL
Sbjct: 304 LARAVPMQRLLQGDVGSGKTLVALRAMLQVVGAGGQAALLAPTEVLAAQHHSSLEALLGP 363
Query: 587 ------MEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALR 640
++ + ++ LLTGSTPV Q R I DL G+ +V+GTH+L+++ V+ L
Sbjct: 364 LARYGMLDGAERATRVHLLTGSTPVAQRRRILADLAAGEPAIVVGTHALLSDTVQIPFLG 423
Query: 641 LAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPR 700
L +VDEQ RFGV QR + T ++G Q PH+L M+ATPIPR
Sbjct: 424 LVVVDEQHRFGVAQRDALRERGGVTDPATG-------------QRHTPHLLVMTATPIPR 470
Query: 701 TLALALYG 708
T +A+YG
Sbjct: 471 T--IAMYG 476
>gi|423321947|ref|ZP_17299818.1| ATP-dependent DNA helicase RecG [Lactobacillus crispatus FB077-07]
gi|405591401|gb|EKB64903.1| ATP-dependent DNA helicase RecG [Lactobacillus crispatus FB077-07]
Length = 678
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 167/517 (32%), Positives = 250/517 (48%), Gaps = 87/517 (16%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGEIISS 269
++ + G+ + L + G Y++ LL +FP Y +LQ +D + DGQ + G I+++
Sbjct: 10 VTDLKGVGTKTTAALGSLGIYSIYDLLFYFPFRYDELQTLPLDQIMDGQKVMLKG-IVAT 68
Query: 270 RGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPF 329
+ + + I +V+ ++ F + P+
Sbjct: 69 EAFVSRFGYKKTRLSFKMRI-------DHDVIMVN-------------------FFNQPW 102
Query: 330 LKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSK 389
LK+ K ++G+ V + GK R + + + K+ D PIYP
Sbjct: 103 LKN---KIEIGQEVAIYGKYNVARQS----LTAFKFVAAKEND-------SGMAPIYPVN 148
Query: 390 GGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLAR 448
+ L D I A+ D V +++ QE+ LL +H PK+ EA+LA+
Sbjct: 149 RHVKQKKLVDLINVAIDDFIDQVQDIVSEKLRQEYRLLKDQVIIEKMHHPKNSHEAELAK 208
Query: 449 KRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRAL 508
+ IF EFF +L +L + G Q G KY + +L ++L
Sbjct: 209 RSAIFREFFIFEL-QLALLTRNDGKQM---GYAKKYDLTEI------------AQLTKSL 252
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
P+ L+ Q ++EI D+ M RLLQGDVG GKTVVA A I +GYQAA MVP
Sbjct: 253 PFELSDDQKHVVNEIFADMHSDGQMRRLLQGDVGSGKTVVAVYAIFAAITAGYQAALMVP 312
Query: 569 TELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHS 628
TE+LATQH++ + +LL + ++ALLTG+T + I ++L G I +VIGTH+
Sbjct: 313 TEILATQHFKKIDELLRPL-----GVRVALLTGNTKTLERCEIYRELTDGTINVVIGTHA 367
Query: 629 LIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAP 688
LI + V F L L I+DEQ RFGV QR A++N K DQ P
Sbjct: 368 LIQDSVIFKKLGLVIIDEQHRFGVGQR---------------QALIN-----KGDQ---P 404
Query: 689 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
+LAM+ATPIPRTLAL +YGDM++++I LP GR PI
Sbjct: 405 DILAMTATPIPRTLALTVYGDMTVSEIHHLPAGRKPI 441
>gi|403510489|ref|YP_006642127.1| helicase conserved C-terminal domain protein [Nocardiopsis alba
ATCC BAA-2165]
gi|402799496|gb|AFR06906.1| helicase conserved C-terminal domain protein [Nocardiopsis alba
ATCC BAA-2165]
Length = 739
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 146/436 (33%), Positives = 216/436 (49%), Gaps = 64/436 (14%)
Query: 313 LHLKKFFRGTRFTS--IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKD 370
LHL F RG+ + +P G SG+V + + EY VL D
Sbjct: 96 LHLTFFNRGSYHQNALVP-----------GRLAMFSGRVSTFKGRRQLDHPEY---VLLD 141
Query: 371 EDDLSLRAKGRPY-----PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGL 425
ED A R Y P+YP+ GL+++ + +I AL DP+P + ++ GL
Sbjct: 142 EDGSEGEA-ARAYADEVIPVYPAVKGLDSATIARSIGVALDYAVDIPDPLPPRLREDRGL 200
Query: 426 LCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYR 485
L + +A IH+P+ +D+ AR+RL +DE F LQL + + E E L + R
Sbjct: 201 LGVHEALTRIHRPRDMDQLRPARRRLKWDEAFVLQLALARR-------RRESEDLPARPR 253
Query: 486 KPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGK 545
P ++ + + LP++LT Q + L PM+ LLQGDVG GK
Sbjct: 254 -PGTEGGILDAFDA-------RLPFTLTDGQREVGDRLAERLDATHPMHCLLQGDVGAGK 305
Query: 546 TVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNM------EEDKHKPKIALL 599
T+VA A + V+ SG QA + PTE+LA QH+ + +L ++ + ++ ++ALL
Sbjct: 306 TLVALRAMLRVVDSGGQAVMLAPTEVLAQQHHRSIGAMLGDLARAGQIDGAENATRVALL 365
Query: 600 TGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFN 659
TGS R D +G +V+GTH+L+ E V F+ L L +VDEQ RFGV QR
Sbjct: 366 TGSMNAASRREALLDAASGAAGIVVGTHALLQEHVSFADLGLVVVDEQHRFGVEQRDALR 425
Query: 660 SKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLP 719
K +DG PHVL M+ATPIPRT+A+ +YGD+ + +T LP
Sbjct: 426 EK-------------ATDGR--------PHVLVMTATPIPRTVAMTVYGDLDVVALTQLP 464
Query: 720 PGRIPIKTYIIEGNEK 735
GR P+ T+++ EK
Sbjct: 465 QGRSPVSTHVVPAGEK 480
>gi|390955045|ref|YP_006418803.1| ATP-dependent DNA helicase RecG [Aequorivita sublithincola DSM
14238]
gi|390421031|gb|AFL81788.1| ATP-dependent DNA helicase RecG [Aequorivita sublithincola DSM
14238]
Length = 716
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 174/518 (33%), Positives = 249/518 (48%), Gaps = 104/518 (20%)
Query: 228 CGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEV-IVG 286
G +T + LL+ FP Y LD QY+ A + EV I+G
Sbjct: 43 LGIHTFQDLLNLFPNRY---------LDRTQYYKI-----------AQLQQTNSEVQIIG 82
Query: 287 --CEIADTETTSGDEVVNI---DSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGE 341
I E G +V ++G + ++ +K+ R ++P++ + + G
Sbjct: 83 KITHIKTVEQKRGKRLVATFIDETGSIELVWFRGQKWIRENLKLNVPYVIFGKTNYFNGS 142
Query: 342 FVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGL-NASLLRDT 400
F S H EM L D + S+R+ +P +YPS L N+ +
Sbjct: 143 F-----------SMPHPEME------LLDAHEKSIRSAMQP--VYPSTEKLGNSGITNRV 183
Query: 401 IARALQAL----PANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARK--RLIF 453
I +Q L NF + + K + E L +A IH PK +A LAR RL F
Sbjct: 184 INGLMQQLFLESKNNFAETLSKPLLDELKLASKREALFNIHFPK--SQAHLARAQYRLKF 241
Query: 454 DEFFYLQLGRLYQML----EGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALP 509
+E FY+QL + + L + G F+K G N + E LP
Sbjct: 242 EELFYIQLQLIRKNLLHKSKIKGYPFDKIG-------DHFNTFFSE-----------HLP 283
Query: 510 YSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPT 569
+ LT +Q I EI DL MNRLLQGDVG GKT+VA +A + + +G+QA M PT
Sbjct: 284 FELTEAQKRVIKEIRNDLGSNAQMNRLLQGDVGSGKTIVAIMAMLIALDNGFQACLMAPT 343
Query: 570 ELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSL 629
E+L+ QHY L+++ N+ I LLTGST + R I + L+ G++ ++IGTH+L
Sbjct: 344 EILSVQHYNGLVEMCKNL-----NTSIELLTGSTKTSKRREIHEKLENGELDMLIGTHAL 398
Query: 630 IAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPH 689
+ EKV+F L LAIVDEQ RFGV QR SKL++ + PH
Sbjct: 399 LEEKVKFKNLGLAIVDEQHRFGVEQR----SKLWHKN------------------EYPPH 436
Query: 690 VLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
VL M+ATPIPRTLA+++YGD+ ++ I +LPPGR IKT
Sbjct: 437 VLVMTATPIPRTLAMSVYGDLDISVIDELPPGRKDIKT 474
>gi|421872892|ref|ZP_16304509.1| ATP-dependent DNA helicase RecG [Brevibacillus laterosporus GI-9]
gi|372458307|emb|CCF14058.1| ATP-dependent DNA helicase RecG [Brevibacillus laterosporus GI-9]
Length = 684
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 161/532 (30%), Positives = 249/532 (46%), Gaps = 98/532 (18%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIG 264
LL +S + G+ LE G Y+++ L+ +FP Y D + + ++ + +G
Sbjct: 4 LLAGPVSNLYGIGAERAKDLEALGIYSIKDLVEYFPSRYEDYRIRDLTEVKHEERVTLVG 63
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
T G+ V KKK + +K
Sbjct: 64 -----------------------------TVYGEPSVRFFG--KKKSRISVKLVMDRVVV 92
Query: 325 TSIPFLKS-IEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP- 382
T++ F + ++ + G+ + V+GK ++ + I V + S RAK R
Sbjct: 93 TAVWFNQMYVKTQLSTGKEIVVTGK---------WDKHKLQITVSEMTQKDSPRAKKRND 143
Query: 383 -YPIYPSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKH 440
P+YP G+N LR TI AL+ + P E+ + + LL +A IH P +
Sbjct: 144 LVPVYPLSAGVNLLFLRKTIQHALEKYGKLIPEILPPELVERYRLLPRHEAIELIHFPGN 203
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSS- 499
E AR+R++F+E F Q+ + +R R+ EG +
Sbjct: 204 AQEGHQARRRIMFEELFLFQVK------------------MQAFR--RITRQQTEGIAQA 243
Query: 500 ----LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
L ++ +R+LP+ LT +Q + E++ D++ P MNRLLQGDVG GKTVVA +A
Sbjct: 244 IPLELVREFVRSLPFPLTGAQKRVVKEVLDDMQAPYAMNRLLQGDVGSGKTVVAAIALYA 303
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
+ +G+Q A MVPTE+LA QH L LL+ + +IALL+GS K+ + + L
Sbjct: 304 TVKAGFQGALMVPTEILAEQHLHSLTGLLEPL-----GLRIALLSGSVTGKKRCELLETL 358
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
Q+G + +V+GTH+LI + V FS L L I DEQ RFGV QR +K
Sbjct: 359 QSGSLDVVVGTHALIQDDVFFSKLGLVITDEQHRFGVEQRRVLRNK-------------- 404
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ P VL M+ATPIPRTLA+ +GDM ++ I ++P GR P++T
Sbjct: 405 ---------GLCPDVLFMTATPIPRTLAITAFGDMDVSVIDEMPAGRKPVET 447
>gi|116490527|ref|YP_810071.1| ATP-dependent DNA helicase RecG [Oenococcus oeni PSU-1]
gi|421187974|ref|ZP_15645315.1| ATP-dependent DNA helicase RecG [Oenococcus oeni AWRIB419]
gi|421190073|ref|ZP_15647377.1| ATP-dependent DNA helicase RecG [Oenococcus oeni AWRIB422]
gi|421192053|ref|ZP_15649322.1| ATP-dependent DNA helicase RecG [Oenococcus oeni AWRIB548]
gi|421193198|ref|ZP_15650449.1| ATP-dependent DNA helicase RecG [Oenococcus oeni AWRIB553]
gi|116091252|gb|ABJ56406.1| ATP-dependent DNA helicase RecG [Oenococcus oeni PSU-1]
gi|399966647|gb|EJO01167.1| ATP-dependent DNA helicase RecG [Oenococcus oeni AWRIB419]
gi|399970000|gb|EJO04306.1| ATP-dependent DNA helicase RecG [Oenococcus oeni AWRIB548]
gi|399970873|gb|EJO05163.1| ATP-dependent DNA helicase RecG [Oenococcus oeni AWRIB422]
gi|399973180|gb|EJO07366.1| ATP-dependent DNA helicase RecG [Oenococcus oeni AWRIB553]
Length = 676
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 172/540 (31%), Positives = 249/540 (46%), Gaps = 101/540 (18%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNA-QIDLDDGQYFIFIGEI-- 266
I+ + G+ ++ L+ G + LL ++P Y DL++ DDGQ F G +
Sbjct: 6 SITELSGVGQKRAEILKQLGILNIEDLLTYYPFRYDDLESRLPSQTDDGQKVTFKGMVSS 65
Query: 267 ---ISSRGMKAG-CSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGT 322
IS G K +F L +G + NI
Sbjct: 66 QPTISRFGYKKSRIAFRLL---IGHD-------------NI-----------------SV 92
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+LK + ++G+ + + G A+ H ++ I + E+D SL A
Sbjct: 93 SFFNQPWLKE---QIEIGKEMAIFGTYDAV----HEALKGQRI--IHAEND-SLAA---- 138
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
IYPS ++ ++ I A D +P+ + + LL +H P
Sbjct: 139 --IYPSNQAIHQKTIQQLIENAYAKYADQINDIIPRRLMLAYRLLSRKKQIHDMHFPDSA 196
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
+ A LAR+ F+EFF Q+ RL M G +E +E S +
Sbjct: 197 ENAKLARRSAAFEEFFIFQM-RLQLMRISAGKNRGRE---------------IEYNSEIL 240
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
+ LPYSLT +Q I EI+ DLK+P+ MNRLLQGDVG GKTVVA +A + +G
Sbjct: 241 NDFIAKLPYSLTDAQKKVIQEILLDLKRPIHMNRLLQGDVGSGKTVVAAIAMLACYSAGL 300
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
QAA MVPTE+LA QH +L L + +I LLT R I DL++G+I
Sbjct: 301 QAAIMVPTEILAQQHAINLSNL---YQSAGLNLRIELLTSGLKAAARRQILADLESGEID 357
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+V+GTH+LI V F L LA++DEQ RFGV QR R
Sbjct: 358 IVVGTHALIQADVHFYNLGLAVIDEQHRFGVKQRARLR---------------------- 395
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVY 741
+Q P +LAM+ATPIPRTLA+ YG+M ++ I LP GR PI T ++ N+ ++NV+
Sbjct: 396 -EQGQNPDILAMTATPIPRTLAITAYGEMDVSTIDQLPNGRRPIITKWVKSNQ--FDNVF 452
>gi|435853929|ref|YP_007315248.1| ATP-dependent DNA helicase RecG [Halobacteroides halobius DSM 5150]
gi|433670340|gb|AGB41155.1| ATP-dependent DNA helicase RecG [Halobacteroides halobius DSM 5150]
Length = 808
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 141/401 (35%), Positives = 208/401 (51%), Gaps = 60/401 (14%)
Query: 333 IEGKHKVGEFVCVSGKVR----AMRSNN-HYEMREYNIDVLKDEDDLSLRAKGRPYPIYP 387
I+ + G+ + SG+V+ + NN HYE + D SL R PIYP
Sbjct: 223 IKKQFNKGDIILFSGEVKYNYGQLEINNPHYE----------EIDGESLHT-NRIVPIYP 271
Query: 388 SKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL 446
+ GLN +R + R L A + +P+ I ++ CL +A +H P + L
Sbjct: 272 TTKGLNQKQVRKIVKRVLDQYRAKVPEFLPEFILDKYSFPCLQEALGQVHFPDSKKDLKL 331
Query: 447 ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLR 506
AR+R ++E F LQLG L T+ +++ L K+ + + L + L
Sbjct: 332 ARRRFAYEELFILQLG-----LALRKTEVQEKVLGLKHDQN----------NQLVNQFLT 376
Query: 507 ALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFM 566
+LP+ LT++Q +I D++ MNRLLQGDVG GKTV+A L ++ + SG+Q A M
Sbjct: 377 SLPFELTAAQSRVWQDIKGDMESTYQMNRLLQGDVGAGKTVIATLGLLKTVQSGWQGALM 436
Query: 567 VPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGT 626
PTE+LA QH+ L + L+++ I LL GS K+ R + ++++G + +VIGT
Sbjct: 437 APTEILAEQHFLGLEEDLESL-----GITIKLLVGSLTAKEKREVIAEIESGAVDIVIGT 491
Query: 627 HSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHM 686
H+LI + + F+ L L IVDEQ RFGV QR K D
Sbjct: 492 HALIQQGINFAQLGLVIVDEQHRFGVRQRATLQEK--------------GDN-------- 529
Query: 687 APHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLAL +YGD+ ++ I +LPPGR P+ T
Sbjct: 530 -PDVLVMTATPIPRTLALTVYGDLDVSVIDELPPGRKPVVT 569
>gi|189501758|ref|YP_001957475.1| ATP-dependent DNA helicase RecG [Candidatus Amoebophilus asiaticus
5a2]
gi|189497199|gb|ACE05746.1| hypothetical protein Aasi_0311 [Candidatus Amoebophilus asiaticus
5a2]
Length = 695
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 134/355 (37%), Positives = 191/355 (53%), Gaps = 56/355 (15%)
Query: 384 PIYPSKGGLNASLLRDTIARALQA-----LPANF-DPVPKEITQEFGLLCLFDAYMGIHQ 437
P+Y + L AS + R +QA P + + +P+++ ++ ++ A IH
Sbjct: 148 PVYHTTEKLKASYIDSKYIRRVQANLIEQFPIHLPETLPEDLCAQYKIIDKKTALANIHF 207
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGW 497
P + AR RL F+E FY+QL ++L+ + EK+ + AAY +
Sbjct: 208 PATPEILQKARFRLKFEELFYVQL----RLLQARQLRLEKQ----------IGAAYKD-- 251
Query: 498 SSLTKKLLR-----ALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLA 552
KLL+ +P+ LT +Q + EI DLK MNRLLQGDVG GKT+VAFL+
Sbjct: 252 ----TKLLQDFYQNVIPFELTGAQKRVVKEIYADLKSGKQMNRLLQGDVGSGKTMVAFLS 307
Query: 553 CMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIR 612
+ V+GSG Q A M PTE+L QHY+ L + + +I +LTGST + R I
Sbjct: 308 MLIVLGSGAQVAMMAPTEILVEQHYKKLQEFAAPLS-----LQIGILTGSTKTSERRKIL 362
Query: 613 KDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMA 672
+L G + +++GTHSLI E V F L LA++DEQ RFGV+QR +F
Sbjct: 363 DELAQGTLQIIVGTHSLINENVVFKNLGLAVIDEQHRFGVMQRAKFWQ------------ 410
Query: 673 MVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+DD PHVL MSATPIPRTLA+ LYGD+ ++ + ++P GR PIKT
Sbjct: 411 --------RDDVQPVPHVLIMSATPIPRTLAMTLYGDLDVSVVDEMPAGRKPIKT 457
>gi|312984225|ref|ZP_07791571.1| ATP-dependent DNA helicase RecG [Lactobacillus crispatus CTV-05]
gi|423318417|ref|ZP_17296294.1| ATP-dependent DNA helicase RecG [Lactobacillus crispatus FB049-03]
gi|310894444|gb|EFQ43520.1| ATP-dependent DNA helicase RecG [Lactobacillus crispatus CTV-05]
gi|405596141|gb|EKB69498.1| ATP-dependent DNA helicase RecG [Lactobacillus crispatus FB049-03]
Length = 678
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 167/517 (32%), Positives = 250/517 (48%), Gaps = 87/517 (16%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGEIISS 269
++ + G+ + L + G Y++ LL +FP Y +LQ +D + DGQ + G I+++
Sbjct: 10 VTDLKGVGTKTTAALGSLGIYSIYDLLFYFPFRYDELQTLPLDQIMDGQKVMLKG-IVAT 68
Query: 270 RGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPF 329
+ + + I +V+ ++ F + P+
Sbjct: 69 EAFVSRFGYKKTRLSFKMRI-------DHDVIMVN-------------------FFNQPW 102
Query: 330 LKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSK 389
LK+ K ++G+ V + GK R + + + K+ D PIYP
Sbjct: 103 LKN---KIEIGQEVAIYGKYNVARQS----LTAFKFVAAKEND-------SGMAPIYPVN 148
Query: 390 GGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLAR 448
+ L D I A+ D V +++ QE+ LL +H PK+ EA+LA+
Sbjct: 149 RHVKQKKLVDLINVAIDDFIDQVQDIVSEKLRQEYRLLKDQVIIEKMHHPKNSHEAELAK 208
Query: 449 KRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRAL 508
+ IF EFF +L +L + G Q G KY + +L ++L
Sbjct: 209 RSAIFREFFIFEL-QLALLTRNDGKQM---GYAKKYDLTEI------------AQLTKSL 252
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
P+ L+ Q ++EI D+ M RLLQGDVG GKTVVA A I +GYQAA MVP
Sbjct: 253 PFELSDDQKHVVNEIFADMHSDGQMRRLLQGDVGSGKTVVAVYAIFAAITAGYQAALMVP 312
Query: 569 TELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHS 628
TE+LATQH++ + +LL + ++ALLTG+T + I ++L G I +VIGTH+
Sbjct: 313 TEILATQHFKKIDELLRPL-----GVRVALLTGNTKTLERCEIYRELTDGTINVVIGTHA 367
Query: 629 LIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAP 688
LI + V F L L I+DEQ RFGV QR A++N K DQ P
Sbjct: 368 LIQDSVIFKKLGLVIIDEQHRFGVGQR---------------QALIN-----KGDQ---P 404
Query: 689 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
+LAM+ATPIPRTLAL +YGDM++++I LP GR PI
Sbjct: 405 DILAMTATPIPRTLALTVYGDMTVSEIHHLPAGRKPI 441
>gi|307690625|ref|ZP_07633071.1| ATP-dependent DNA helicase RecG [Clostridium cellulovorans 743B]
Length = 681
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 164/532 (30%), Positives = 247/532 (46%), Gaps = 80/532 (15%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
I + G+ + L G Y L LL +FPR Y ++ +++ I I
Sbjct: 7 IKNLKGVGPKALQLLNKSGIYNLLDLLLYFPREYENITSSED----------ITNINGKE 56
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFL 330
+K C L + D+ + + F G F P++
Sbjct: 57 KLKIKC--KVLRIF------------PDKRTKTGKTITTIAFSDGENTFYGKWFNQ-PYV 101
Query: 331 KSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKG 390
K K+ + + + G+V+ + + YE+ N K+++D ++ P YP K
Sbjct: 102 KK---KYFIDKEYTLIGEVKKVGKD--YEIS--NPKDFKEKEDKE-KSDKNIIPKYPLKA 153
Query: 391 GLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKR 450
GL + I L+A+ + +P+ I +++ L L A IH PK + A +R
Sbjct: 154 GLTNNFFIKLITSILEAMFIR-ENLPEWIIEKYKLCSLDYAIRNIHYPKEENALRAAERR 212
Query: 451 LIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPY 510
L F E F L L +L +Y K + L L +LP+
Sbjct: 213 LKFQELFTYSLKIL---------------MLKEYVKSNKEGIAFKIAPELV-DLKNSLPF 256
Query: 511 SLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTE 570
LT +Q A+ EI+ D+K+P PMNRLLQGDVG GKT+VA +A + YQ M PTE
Sbjct: 257 QLTDAQSKAVREILSDMKKPTPMNRLLQGDVGSGKTIVALIALFNAAKNQYQGVLMAPTE 316
Query: 571 LLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLI 630
+LA QHY ++++ KI LLTGST KQ I+++++ G I ++IGTH+LI
Sbjct: 317 ILANQHYHEFIRIMAPF-----NIKIELLTGSTTKKQKERIKEEIKGGKIDILIGTHALI 371
Query: 631 AEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHV 690
+ V+F L + + DEQ RFGV+QR + +K G D V
Sbjct: 372 EDDVQFENLGIIVTDEQHRFGVMQRNKLFNK----------------GKNID-------V 408
Query: 691 LAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYK 742
L M+ATPIPRTLAL LYGD+ ++ I LPPGR I+T G +K +N+Y+
Sbjct: 409 LVMTATPIPRTLALYLYGDLEVSIIDQLPPGREKIETK--HGTKKQRDNIYE 458
>gi|331698532|ref|YP_004334771.1| ATP-dependent DNA helicase RecG [Pseudonocardia dioxanivorans
CB1190]
gi|326953221|gb|AEA26918.1| ATP-dependent DNA helicase RecG [Pseudonocardia dioxanivorans
CB1190]
Length = 748
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 164/526 (31%), Positives = 243/526 (46%), Gaps = 105/526 (19%)
Query: 230 FYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEI 289
+T+ LL H+PR Y D G++ G++ G + + + +
Sbjct: 37 LHTVGDLLRHYPRRYVDR----------------GKLSDISGLEIGEHVTVVAKVEKATL 80
Query: 290 ADTETTSG---DEVVNIDSGQKKKIYLHLKKFFRGTRFTSI--PFLKSIEGKHKVGEFVC 344
D + G + V+ D G + FF G + + + P ++++
Sbjct: 81 RDMRSRRGKLLNVVIRDDKGGRLSCT-----FFNGYKVSHVLTPGVRAL----------- 124
Query: 345 VSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY-PIYPSKGGLNASLLRDTIAR 403
SGKV +S E+ + L++ +D+ RP+ +YP+ LN+ + + +
Sbjct: 125 FSGKVGVFQSQLQLTHPEF--EPLEEGEDV------RPFVSVYPAVDKLNSWDIARCVRQ 176
Query: 404 ALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLG- 462
L L DP+P++I + L L A IH P+ + AR RL++DE +QL
Sbjct: 177 VLDQLDDPTDPLPEDIRRREKLPELGRALRRIHLPETEADHHAARARLVWDEALGVQLAL 236
Query: 463 --RLYQMLEGLGTQF--EKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLS 518
R E GT GLLD + LP++LT Q +
Sbjct: 237 ALRRRHATERPGTASPPRAGGLLDAFDA--------------------RLPFALTDGQRA 276
Query: 519 AISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYE 578
+EI DL + PMNRL+QGDVG GKTVVA A ++V+ SG QAA + PTE+LA QH
Sbjct: 277 VGTEIAADLARETPMNRLVQGDVGAGKTVVALRAMLQVVDSGRQAAMLAPTEVLAAQHAR 336
Query: 579 HLLKL---------LDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSL 629
L L LD EE +I LLTGS R D+Q+G +V+GTH+L
Sbjct: 337 SLRSLLGPLGRAGELDGAEE---ATRITLLTGSLGTAARRQAMLDVQSGAAGIVVGTHAL 393
Query: 630 IAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPH 689
I +KV F+ L L +VDEQ RFGV QR + T PH
Sbjct: 394 IQDKVGFADLGLVVVDEQHRFGVEQRDALRGRGERT----------------------PH 431
Query: 690 VLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
+L M+ATPIPRT+A+ +YGD+ ++ +T+LP GR PI T ++ EK
Sbjct: 432 MLVMTATPIPRTVAMTVYGDLEVSALTELPRGRSPISTTVVPAGEK 477
>gi|329957261|ref|ZP_08297781.1| ATP-dependent DNA helicase RecG [Bacteroides clarus YIT 12056]
gi|328522974|gb|EGF50077.1| ATP-dependent DNA helicase RecG [Bacteroides clarus YIT 12056]
Length = 698
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 166/516 (32%), Positives = 249/516 (48%), Gaps = 97/516 (18%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEV-- 283
+ G ++ LL++FP Y D +I EI + ++++
Sbjct: 25 KELGIFSFHDLLYYFPYKYVDRSR----------IYYIQEI--------DGTMPYIQLKG 66
Query: 284 -IVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIE---GKHKV 339
I+G E T+G+ G+++++ H F GT + + + I+ GK+KV
Sbjct: 67 EILGFE------TAGE-------GRQRRLIAH---FSDGTGVVDLIWFQGIKYLIGKYKV 110
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG-RPYPIYPSK---GGLNA- 394
+ V GK N + +ID +L L A G +PY K LN+
Sbjct: 111 HQEYIVFGKPSVF--NGRINIAHPDID---PASELKLSAMGLQPYYNTTEKMKRSSLNSH 165
Query: 395 ---SLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRL 451
++++ + + + LP P + E L+ L DA + IH P D A RL
Sbjct: 166 AMEKMMKNIVRQLNEPLPETLSPA---LLAEHHLMPLTDALLNIHFPVSPDALRKAEYRL 222
Query: 452 IFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYS 511
F+E FY+QL L ++ K D+ RK R + + + R LP+
Sbjct: 223 KFEELFYVQLNIL---------RYAK----DRQRKYR-GYVFEKIGETFNGFYSRNLPFE 268
Query: 512 LTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTEL 571
LT++Q + EI DL MNRLLQGDVG GKT+VA ++ + + +GYQA M PTE+
Sbjct: 269 LTNAQKRVLKEIRRDLGSGKQMNRLLQGDVGSGKTLVALMSMLIALDNGYQACMMAPTEI 328
Query: 572 LATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIA 631
LA QHYE + +LL M+ ++ LLTGS K+ I L TGD+ ++IGTH++I
Sbjct: 329 LANQHYETIRELLYGMD-----VRVELLTGSIKGKRREAILSGLLTGDVQILIGTHAVIE 383
Query: 632 EKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVL 691
+ V F++L L ++DEQ RFGV QR R +K PH+L
Sbjct: 384 DTVNFASLGLVVIDEQHRFGVAQRARLWTK----------------------SVQPPHIL 421
Query: 692 AMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
M+ATPIPRTLA+ LYGD+ ++ I +LPPGR PI T
Sbjct: 422 VMTATPIPRTLAMTLYGDLDVSVIDELPPGRKPIAT 457
>gi|255690507|ref|ZP_05414182.1| ATP-dependent DNA helicase RecG [Bacteroides finegoldii DSM 17565]
gi|260623959|gb|EEX46830.1| ATP-dependent DNA helicase RecG [Bacteroides finegoldii DSM 17565]
Length = 698
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 173/535 (32%), Positives = 253/535 (47%), Gaps = 107/535 (20%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNAQ-IDLDDGQ--YFIFIGEIISSRGMKAGCSFSFLE 282
+ G Y+L L+++FP Y D I DG Y GEI+ G +A
Sbjct: 25 KELGIYSLHDLIYYFPYKYVDRSRVYYIHEIDGNMPYIQLKGEIL---GFEA-------- 73
Query: 283 VIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIE---GKHKV 339
I G+++++ H F GT + + + I+ GK+K+
Sbjct: 74 --------------------IGEGRQRRLTAH---FSDGTGVVDLVWFQGIKYILGKYKL 110
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG-RPYPIYPSK---GGLNAS 395
E + GK N + +ID D+L L + G +PY K LN+
Sbjct: 111 HEEYIIFGKPTVF--NGRINVAHPDID---KSDELKLSSVGLQPYYNTTEKMKRSFLNSH 165
Query: 396 LLRDTIARALQALPANFDPVPKEIT----QEFGLLCLFDAYMGIHQPKHIDEADLARKRL 451
+ +A +Q + +P+P+ ++ E L+ L +A IH P + D A+ RL
Sbjct: 166 AIEKMMATVIQQIQ---EPLPETLSPKLLAEHHLMPLTEALRNIHFPANPDLLRRAQYRL 222
Query: 452 IFDEFFYLQLGRLY----QMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRA 507
F+E FY+QL L + G FEK G + N Y +
Sbjct: 223 KFEELFYVQLNILRYAKDRQRRYRGYVFEKVGDV-------FNTFYA-----------KN 264
Query: 508 LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMV 567
LP+ LT +Q + EI D+ MNRLLQGDVG GKT+VA ++ + + +GYQA M
Sbjct: 265 LPFQLTGAQKRVLKEIRNDVGSGRQMNRLLQGDVGSGKTLVALMSMLLALDNGYQACMMA 324
Query: 568 PTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTH 627
PTE+LA QHYE + +LL M+ ++ LLTGS K+ I L TGD+ ++IGTH
Sbjct: 325 PTEILANQHYETIKELLFGMD-----IRVELLTGSIKGKKREAILSGLLTGDVHILIGTH 379
Query: 628 SLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMA 687
++I + V FS+L ++DEQ RFGV QR R SK +
Sbjct: 380 AVIEDTVNFSSLGFVVIDEQHRFGVAQRARLWSK----------------------NNQP 417
Query: 688 PHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYK 742
PHVL M+ATPIPRTLA+ LYGD+ ++ I +LPPGR PI T N + E++Y+
Sbjct: 418 PHVLVMTATPIPRTLAMTLYGDLDVSVIDELPPGRKPITTVHQFDNRR--ESIYR 470
>gi|417694571|ref|ZP_12343758.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47901]
gi|332201120|gb|EGJ15191.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47901]
Length = 671
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 163/531 (30%), Positives = 256/531 (48%), Gaps = 97/531 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEIVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ QML+ + + GL+ + + ++ A +
Sbjct: 197 LAEYKQALRRIKFEELFYFQMQ--LQMLKS-ENRVQGSGLVLNWSQEKVTAVKV------ 247
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
+LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +G
Sbjct: 248 ------SLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTAG 301
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+
Sbjct: 302 YQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGEA 354
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 355 DLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN-- 398
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 -------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|86133709|ref|ZP_01052291.1| DEAD/DEAH box helicase [Polaribacter sp. MED152]
gi|85820572|gb|EAQ41719.1| DEAD/DEAH box helicase [Polaribacter sp. MED152]
Length = 698
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 131/354 (37%), Positives = 191/354 (53%), Gaps = 55/354 (15%)
Query: 384 PIYPS-----KGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQ 437
PIY S G++ ++R I + LQ + + EI +F L+ DA + +H
Sbjct: 148 PIYHSTEKLTNSGVSNKMIRSYIQKLLQQFYDGIQESLSTEIINDFKLMKKRDALLNVHF 207
Query: 438 PKHIDEADLARKRLIFDEFFYLQL----GRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAY 493
PK + A+ RL F+E F++QL +L + G FE G + N Y
Sbjct: 208 PKSQENLAKAQNRLKFEELFFIQLQLVRKKLINKAKIKGFVFENVGAI-------FNQFY 260
Query: 494 MEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLAC 553
E LP++LT++Q + EI D+ MNRLLQGDVG GKT+VA L
Sbjct: 261 SE-----------KLPFNLTNAQKRVLKEIRKDVASGAHMNRLLQGDVGSGKTIVALLTT 309
Query: 554 MEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRK 613
+ I +GYQA M PTE+LA QH+ + +L++ M K+ +LTGS K+ R I +
Sbjct: 310 LLAIDNGYQATIMAPTEILANQHFIAVSELVEGMN-----IKVDILTGSVRTKKRREIHE 364
Query: 614 DLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAM 673
L+ G + ++IGTH+L+ +KV+F L +AI+DEQ RFGV QR + +K
Sbjct: 365 GLEDGKLHILIGTHALLEDKVKFKNLGIAIIDEQHRFGVKQRAKLWAK------------ 412
Query: 674 VNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
NS + PH+L M+ATPIPRTLA+++YGD+ ++ I +LPPGR IKT
Sbjct: 413 -NS---------LPPHILVMTATPIPRTLAMSVYGDLDISVIDELPPGRKEIKT 456
>gi|145219225|ref|YP_001129934.1| ATP-dependent DNA helicase RecG [Chlorobium phaeovibrioides DSM
265]
gi|145205389|gb|ABP36432.1| ATP-dependent DNA helicase RecG [Chlorobium phaeovibrioides DSM
265]
Length = 705
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 161/544 (29%), Positives = 250/544 (45%), Gaps = 91/544 (16%)
Query: 208 DKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQ--NAQIDLDDGQYFIFIGE 265
+ + + GL + L+ G +L L ++PR Y D + N+ L G+ +G
Sbjct: 4 NSSLQALKGLGPKKIEILQEAGISSLENLFDYWPRRYLDRRAMNSIAGLRMGEMATVVGT 63
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFT 325
+ S+ + G + +V ++AD SG V+++ +FRG R+
Sbjct: 64 VRSAGIEQGGRGMARFKV----KLADR---SG--VLDL-------------TWFRGARYF 101
Query: 326 SIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVL--------KDEDDLSLR 377
S + G+ + V GKV +M+ + D L K+ D L
Sbjct: 102 SRAIVP--------GDILAVYGKVGYF--GRQAQMQHPDFDRLGREGADRDKEGSDAELF 151
Query: 378 AKGRPYPIYPS-----KGGLNASLLRDTIARALQAL-PANFDPVPKEITQEFGLLCLFDA 431
GR P+YP+ + GL + LR IARA P + + I + L+ L +A
Sbjct: 152 NTGRIIPLYPTSEAMKRSGLASRQLRGLIARAFDIRQPGGTENLSSGILKAHSLMPLSEA 211
Query: 432 YMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNA 491
Y +HQP + +A R+ + E FY QL L + + A
Sbjct: 212 YRELHQPSSPERLQMAEYRMKWTELFYAQL---------------SFALRRRALRHTRTA 256
Query: 492 AYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFL 551
T L ALPYSLT +Q +AI E+ DLK PM RL+QGDVG GKT+VA
Sbjct: 257 VQFSHSGEFTAALHAALPYSLTGAQKNAIRELYRDLKGESPMQRLVQGDVGSGKTIVAMF 316
Query: 552 ACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMI 611
A + Q+ FM PTE+LA QH+ + +L + + ++ LLTG P K +
Sbjct: 317 AMALAADNNLQSVFMAPTEILAVQHWLGMKRLFEPL-----GIQVCLLTGRQPKKVREAL 371
Query: 612 RKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGM 671
+L+ G + + +GTH+L+ V+F +L L ++DEQ RFGV+QR K
Sbjct: 372 LMELREGRVHIAVGTHALLQHDVDFHSLGLVVIDEQHRFGVLQRKTLQDKA--------- 422
Query: 672 AMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
QH PHVL M+ATPIPRTL + ++GD+ ++ I ++P GR P++T + +
Sbjct: 423 ------------QH--PHVLLMTATPIPRTLTMGVFGDLDVSLIREMPTGRQPVRTLVQQ 468
Query: 732 GNEK 735
+K
Sbjct: 469 EADK 472
>gi|239826579|ref|YP_002949203.1| ATP-dependent DNA helicase RecG [Geobacillus sp. WCH70]
gi|239806872|gb|ACS23937.1| ATP-dependent DNA helicase RecG [Geobacillus sp. WCH70]
Length = 682
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 129/349 (36%), Positives = 185/349 (53%), Gaps = 44/349 (12%)
Query: 384 PIYPSKGGLNASLLRDTIARAL-QALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHID 442
P+Y +G + +R I AL Q A DP+P I Q + L+ +A IH P+ +
Sbjct: 143 PVYSVRGSITVKGMRRFIKLALTQYGEAIVDPLPLSIRQTYRLISKQEAIRAIHFPRSHE 202
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
E AR+RL+++EF QL L + ++ EG+ + + +L+A
Sbjct: 203 ELKQARRRLVYEEFLLFQLK--IHALRKVQREY-SEGIAHSFSEEKLHA----------- 248
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
++ LP+SLT +Q + EI+ D++ P MNRLLQGDVG GKTVVA + + SGYQ
Sbjct: 249 -FIQQLPFSLTKAQQRVVHEILADMRSPYRMNRLLQGDVGSGKTVVAAIVLYAAVLSGYQ 307
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
A MVPTE+LA QH + L L + +ALLT S K+ + I + L GDI +
Sbjct: 308 GALMVPTEILAEQHAQSLQTLFAST-----NVAVALLTSSVKGKKRKEILEQLACGDIDI 362
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
+IGTH+LI E+V F L L I DEQ RFGV QR K
Sbjct: 363 IIGTHALIQEEVNFKKLGLVITDEQHRFGVEQRRILREK--------------------- 401
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
+P VL M+ATPIPRTLA+ +G+M ++ I ++P GR ++TY ++
Sbjct: 402 --GQSPDVLMMTATPIPRTLAITAFGEMDVSVIDEMPAGRKKVQTYWVK 448
>gi|442804248|ref|YP_007372397.1| ATP-dependent DNA helicase RecG [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442740098|gb|AGC67787.1| ATP-dependent DNA helicase RecG [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 715
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 133/353 (37%), Positives = 187/353 (52%), Gaps = 54/353 (15%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKHID 442
P+YP G+ S +R AL + + P+E+ + + L + + IH P +
Sbjct: 176 PVYPLTAGITQSYMRMIQRNALNLVIGKLTEILPEELRRRYSLAEINFSLENIHFPSSFE 235
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGL---GTQFEKEGLLDKYRKPRLNAAYMEGWSS 499
+ + ARKRL+F+E LQLG L + G + EK L+D++
Sbjct: 236 DKERARKRLVFEELLMLQLGLLQLKTKQTAVSGIKMEKRSLVDRF--------------- 280
Query: 500 LTKKLLRALPYSLTSSQLSAISEIIWDLKQ-PVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
+ LP+ LT++QL EI D+ MNRL+QGDVG GKT+VA LA + +
Sbjct: 281 -----IEQLPFRLTNAQLRVYREIEEDMTSGEKQMNRLIQGDVGSGKTIVAALAILLTVL 335
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+GYQA FMVPTE+LA QHY + LL N + K ALLTGS K+ I++ ++
Sbjct: 336 NGYQAVFMVPTEILAEQHYRSITPLLGN-----YGVKTALLTGSVSRKEKEKIKEGIRNN 390
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+ LVIGTH+L+ E VEF+ L L + DEQ RFGV QR SK
Sbjct: 391 EYHLVIGTHALLEEDVEFARLGLVVTDEQHRFGVKQRAVLASK----------------- 433
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
PH+L M+ATPIPRTL+L LYGD+ ++ I +LPP R P+KTY ++
Sbjct: 434 -------ANPHILVMTATPIPRTLSLILYGDLDISVIDELPPDRKPVKTYAVD 479
>gi|398828362|ref|ZP_10586563.1| ATP-dependent DNA helicase RecG [Phyllobacterium sp. YR531]
gi|398218397|gb|EJN04907.1| ATP-dependent DNA helicase RecG [Phyllobacterium sp. YR531]
Length = 702
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 150/432 (34%), Positives = 216/432 (50%), Gaps = 70/432 (16%)
Query: 304 DSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREY 363
D+G+ + H K+ + +E VGE V VSG + +
Sbjct: 99 DTGEISLTFFHAKQTW-------------LEKAMPVGETVIVSGTMEWFNGRPSM-VHPD 144
Query: 364 NIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEF 423
+I ++D LSL P+YP GL+ +L I AL P + + + +++
Sbjct: 145 HIASIEDAASLSLVE-----PVYPLTAGLSPKVLARGIQEALGKTPDMPEWIEAPVLEKY 199
Query: 424 GLLCLFDAYMGIHQPKHIDEADLA-----RKRLIFDEFFYLQLGRLYQMLEGLGTQFEKE 478
L A +H P+ D +D+A R+RL +DEF QL
Sbjct: 200 SLPAHRQALQVLHNPR--DPSDIALDHPARQRLAYDEFLAGQLALA-------------- 243
Query: 479 GLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQ 538
L + + RL+ +EG + K++ ALPYSLT+SQ AI EII DL++P M RLLQ
Sbjct: 244 --LVRMKTRRLSGRKLEGDGHIKAKIIAALPYSLTNSQQQAIKEIIVDLREPDRMLRLLQ 301
Query: 539 GDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIAL 598
GDVG GKT+V LA +G Q+A MVPTE+LA QH+ ++ L K ++AL
Sbjct: 302 GDVGSGKTIVGLLAMAHAAEAGGQSALMVPTEVLARQHFATIMPL-----AQKAGLRVAL 356
Query: 599 LTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRF 658
LTG ++ I + L++G I +++GTH+L EKV + L L IVDEQ RFGV QR
Sbjct: 357 LTGREKGREREEILEGLRSGAIHIIVGTHALFQEKVNYHDLVLVIVDEQHRFGVHQR--- 413
Query: 659 NSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDL 718
++ S GS AP +L M+ATPIPRTL L +GDM ++++T+
Sbjct: 414 -------------LLLTSKGS-------APDMLVMTATPIPRTLVLTAFGDMDVSKLTEK 453
Query: 719 PPGRIPIKTYII 730
P GR PI T I+
Sbjct: 454 PAGRRPITTAIL 465
>gi|297184106|gb|ADI20225.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11]
Length = 696
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 133/353 (37%), Positives = 191/353 (54%), Gaps = 53/353 (15%)
Query: 384 PIYPS-----KGGLN----ASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMG 434
P+Y + K GLN A ++++ + + L F + Q L+ A
Sbjct: 146 PVYSTTEKLTKRGLNSKGIARVMKEVLKKELGQFEETFSEAFRTKHQ---LISKIQALNW 202
Query: 435 IHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYM 494
IH P + ARKR+ F+EFF+LQL + L ++ + Y + ++
Sbjct: 203 IHFPPSAQHLEAARKRIKFEEFFFLQLTQQRNKLR-------QKTAIKGYTFKEVGQFFL 255
Query: 495 EGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACM 554
+S+ LP+ LT +Q + EI D++ MNRL+QGDVG GKT+VA LA +
Sbjct: 256 NFYSN-------HLPFKLTQAQKRVVKEIRGDVRTGAQMNRLVQGDVGSGKTIVALLAML 308
Query: 555 EVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKD 614
I +GYQAA M PTE+LATQHY L +L D +ALLTGSTP + I
Sbjct: 309 LAIDNGYQAALMAPTEILATQHYNGLKELCDPA-----GISVALLTGSTPAARRAEIHTG 363
Query: 615 LQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMV 674
L+ G + ++IGTH+LI V+F+ L LA++DEQ RFGV QR +KL+
Sbjct: 364 LKEGSLQILIGTHALIEPTVKFANLGLAVIDEQHRFGVAQR----AKLW----------- 408
Query: 675 NSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
K ++H PHVL M+ATPIPRTLA+++YGD+ ++ I +LPPGR P+KT
Sbjct: 409 ------KKNEH-PPHVLVMTATPIPRTLAMSVYGDLDISVIDELPPGRKPVKT 454
>gi|163788712|ref|ZP_02183157.1| ATP-dependent DNA helicase [Flavobacteriales bacterium ALC-1]
gi|159875949|gb|EDP70008.1| ATP-dependent DNA helicase [Flavobacteriales bacterium ALC-1]
Length = 700
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 149/420 (35%), Positives = 218/420 (51%), Gaps = 68/420 (16%)
Query: 318 FFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLR 377
+FRG ++ I K G+ + GK S Y M I+ L+ E D +LR
Sbjct: 97 WFRGQKW--------IRESLKTGKPYVIFGKTNWFSSK--YSMPHPEIE-LQTEHDNNLR 145
Query: 378 AKGRPYPIYPSKGGL-NASLLRDTIARALQALPAN-----FDPVPKEITQEFGLLCLFDA 431
+ + IYPS L N + I + +Q L + + + + +E L+ DA
Sbjct: 146 SAMQA--IYPSTEKLSNKGITNRVITKIMQQLFLDTKGKFVETLSDLVMRELKLISKSDA 203
Query: 432 YMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQML----EGLGTQFEKEGLLDKYRKP 487
IH PK + A+ RL F+E FY+QL + + L + G FEK G
Sbjct: 204 LFNIHFPKTPELLSKAQFRLKFEELFYIQLQLILKNLIHKSKIKGFPFEKVG-------D 256
Query: 488 RLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTV 547
N Y LP+ LT++Q + EI DL MNRLLQGDVG GKT+
Sbjct: 257 YFNTFYNS-----------HLPFELTNAQKRVLKEIRQDLGSNAQMNRLLQGDVGSGKTI 305
Query: 548 VAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQ 607
VAF++ + + +G+Q M PTE+L+ QHY L +L + + +I+LLTGS+ +
Sbjct: 306 VAFMSMLVGLDNGFQCCLMAPTEILSVQHYNGLKELCNKLN-----IRISLLTGSSKTSE 360
Query: 608 SRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSM 667
R I ++L+ G++ ++IGTH+L+ +KV+F L LAI+DEQ RFGV QR SKL++ +
Sbjct: 361 RRKIHENLENGNLQILIGTHALLEDKVKFKNLGLAIIDEQHRFGVQQR----SKLWHKNT 416
Query: 668 SSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
S PHVL M+ATPIPRTLA+++YGD+ ++ I +LP GR PIKT
Sbjct: 417 S------------------PPHVLVMTATPIPRTLAMSVYGDLDISVIDELPAGRKPIKT 458
>gi|358063805|ref|ZP_09150406.1| ATP-dependent DNA helicase RecG [Clostridium hathewayi WAL-18680]
gi|356698004|gb|EHI59563.1| ATP-dependent DNA helicase RecG [Clostridium hathewayi WAL-18680]
Length = 711
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 140/408 (34%), Positives = 213/408 (52%), Gaps = 55/408 (13%)
Query: 326 SIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPI 385
++PFL++ K+G + G+V ++ NN M + I + L + P+
Sbjct: 123 NMPFLRTT---LKMGTYHIFCGRV--VKKNNRLTMEQPEIFTKESYGALMESMQ----PV 173
Query: 386 YPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
Y GLN + +++AL+ + +P ++ +++ L A IH P + E
Sbjct: 174 YGQTRGLNNKTITKAVSQALENRTMEREYLPADLRRKYELAEYNFAIQHIHFPDNQQELL 233
Query: 446 LARKRLIFDEFFYLQLG--RLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
ARKRL+FDEFF L RL EK G D++ +++ + +
Sbjct: 234 FARKRLVFDEFFMFILAVRRLK----------EKRG--DRH------SSFTIAMAPEVEA 275
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
L LPYSLT +Q +SE+ DL+ + MNRL+QGDVG GKT++A L+ + +GYQ
Sbjct: 276 LKERLPYSLTGAQQKTLSEVEHDLESGLVMNRLIQGDVGSGKTIIAILSLLHAAYNGYQG 335
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A MVPTE+LA QHYE++L+L EE + L+TGS K+ R+ + + + ++
Sbjct: 336 ALMVPTEVLARQHYENMLELF---EEQGIEKVPVLVTGSMTAKEKRIAYEKIANHEADII 392
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GTH+LI +KV + L L I DEQ RFGV QR M+ G
Sbjct: 393 VGTHALIQDKVVYDNLALVITDEQHRFGVGQR----------------EMLGQKGQ---- 432
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
PHVL MSATPIPRTLA+ +YGD+ ++ I +LP R+PIK +++
Sbjct: 433 ---MPHVLVMSATPIPRTLAIIIYGDLDISVIDELPANRLPIKNCVVD 477
>gi|150019944|ref|YP_001305298.1| ATP-dependent DNA helicase RecG [Thermosipho melanesiensis BI429]
gi|149792465|gb|ABR29913.1| ATP-dependent DNA helicase RecG [Thermosipho melanesiensis BI429]
Length = 773
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 128/364 (35%), Positives = 196/364 (53%), Gaps = 56/364 (15%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
P+Y G+ +++R I L + D +P E+ + LL ++ AY G+H P +
Sbjct: 239 PVYSLTEGIKQNVIRRIIKENLYNIYNFKDYLPDELKGKRRLLDVYQAYTGMHFPLSMYH 298
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLE-----GLGTQFEKEGLLDKYRKPRLNAAYMEGWS 498
++R RL ++E YLQL E G+ FE
Sbjct: 299 QKMSRFRLAYEEILYLQLAFFLSKKENENIGGISKNFE---------------------G 337
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
L+ +LL+ LP+ LT++QL+A EI DLK PMNRLLQGDVG GKT+V+ LA ++
Sbjct: 338 KLSSELLKQLPFKLTNAQLNAYEEIKKDLKSDKPMNRLLQGDVGSGKTIVSELAILDNYE 397
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+G+Q+A MVPT +LA Q+++ + + L + ++ALL G+T + I++ L+ G
Sbjct: 398 AGFQSAVMVPTSILAIQNFKKMFEHL-----SRFGIRVALLLGATSTTEKNRIKQMLKNG 452
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
D+ +V+GTH+LI E V F L L ++DEQ RFGV QR +K G
Sbjct: 453 DLDVVVGTHALIQEDVHFKNLGLVVIDEQHRFGVRQRKELIAK----------------G 496
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYE 738
D L M+ATPIPRTL+L++YGD+ ++ I ++P GR PIKT+++ ++ +
Sbjct: 497 KLVD-------TLVMTATPIPRTLSLSVYGDLDVSIIDEMPKGRKPIKTFVV--HQTKID 547
Query: 739 NVYK 742
VYK
Sbjct: 548 EVYK 551
>gi|403378871|ref|ZP_10920928.1| protein RecG [Paenibacillus sp. JC66]
Length = 685
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 163/532 (30%), Positives = 244/532 (45%), Gaps = 98/532 (18%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIIS 268
+ + G+ + LE G +T ++LL +FP Y D + + + DG+ G+I
Sbjct: 7 AVKQIKGVGPKKAEDLEQLGIHTAQQLLEYFPFRYEDYRIRDLAQVADGEKATVEGKIYG 66
Query: 269 SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIP 328
+ ++ + G +KK L K T++
Sbjct: 67 TPSLQ----------MYG---------------------RKKSRLTCKVVVNDVMVTAVW 95
Query: 329 FLKS-IEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYP 387
F + I+ + + GE + ++GK + R E+ + G P+Y
Sbjct: 96 FNRHFIKDQLQPGETIVLNGKWDSRRQQLTVSEHEFPAKASRQGP-----RSGTLQPVYS 150
Query: 388 SKGGLNASLLRDTIARALQALPANFDPVPKEITQ-EFGLLCLFDAYMGIHQPKHIDEADL 446
G ++ + +R TI AL+ + + + E ++ L+ +A +H+P + ++
Sbjct: 151 VAGPISQAWMRKTIKTALERYGSYVEELLPEELLGKYKLISRKEAVAHVHRPDNFEDGRQ 210
Query: 447 ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWS-----SLT 501
AR+RL+++E F QL + YR LN +G +
Sbjct: 211 ARRRLVYEELFLFQLK------------------MQAYRA--LNRGRTDGVAHALDMEAI 250
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
+ +R+LP+ LT SQ ++EI DLK+P MNRLLQGDVG GKT VA ++ V+ +G
Sbjct: 251 RSFIRSLPFELTDSQKKVLAEIFRDLKEPYSMNRLLQGDVGSGKTAVAAVSLFAVVKAGK 310
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKP---KIALLTGSTPVKQSRMIRKDLQTG 618
Q A MVPTE+LA QH L E+ P ++ALLTGS K R LQ G
Sbjct: 311 QGALMVPTEILAEQHKRSL--------EEMFAPFGIQVALLTGSLREKARRETLASLQMG 362
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
LVIGTH+LI E V F +L L I DEQ RFGV QRG SK
Sbjct: 363 LTDLVIGTHALIQEDVVFRSLGLVITDEQHRFGVNQRGILRSK----------------- 405
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+ P VL M+ATPIPRTLA+ +GDM ++ +T+LP GR PIKTY +
Sbjct: 406 ------GLNPDVLTMTATPIPRTLAITAFGDMDVSTLTELPKGRKPIKTYSV 451
>gi|444409911|ref|ZP_21206490.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae PNI0076]
gi|444412841|ref|ZP_21209160.1| putative ATP-dependent DNA helicase RecG [Streptococcus pneumoniae
PNI0153]
gi|444422712|ref|ZP_21218357.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae PNI0446]
gi|444274080|gb|ELU79735.1| putative ATP-dependent DNA helicase RecG [Streptococcus pneumoniae
PNI0153]
gi|444278588|gb|ELU84028.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae PNI0076]
gi|444287930|gb|ELU92836.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae PNI0446]
Length = 671
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 163/531 (30%), Positives = 256/531 (48%), Gaps = 97/531 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ QML+ + + GL+ + + ++ A +
Sbjct: 197 LAEYKQALRRIKFEELFYFQMQ--LQMLKS-ENRVQGSGLVLNWSQEKVTAVKV------ 247
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
+LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +G
Sbjct: 248 ------SLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTAG 301
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+
Sbjct: 302 YQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGEA 354
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 355 DLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN-- 398
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 -------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|404420393|ref|ZP_11002134.1| ATP-dependent DNA helicase RecG [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
gi|403660051|gb|EJZ14645.1| ATP-dependent DNA helicase RecG [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
Length = 749
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 162/541 (29%), Positives = 249/541 (46%), Gaps = 100/541 (18%)
Query: 227 NCGFYTLRKLLHHFPRTYAD-----LQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFL 281
N G T+ LL H+PR Y+D + +DL++G++ FI
Sbjct: 23 NFGLRTVNDLLRHYPRKYSDGMTVREEGEALDLEEGEHVTFI------------------ 64
Query: 282 EVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKS-IEGKHKVG 340
+V+ EI + +T V G ++ YL + T+ F + K + G
Sbjct: 65 DVVTKAEIGEMRST----VRTKSGGTRRAKYLRVALGDHRPAVTATFFNAGWMADKVEKG 120
Query: 341 EFVCVSGKVRAMRSN---NHYEMREYNIDVLKDEDDLSLR-------AKGRP-------- 382
+ +SG+V+ R+N NH N K SL A G
Sbjct: 121 TRLMLSGEVKYFRNNLQLNHPAFLVLNPPPGKQIGTKSLTTIASASGASGEEMLAAFERD 180
Query: 383 -YPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
+PIYP+ + + + + + L L DP+P++ ++ L+ +A IH ++
Sbjct: 181 FFPIYPASSKIQSWDIYACVRQTLDLLDPVPDPLPEDFVRQHNLMSEDEALRAIHLAENA 240
Query: 442 DEADLARKRLIFDEFFYLQLG---RLYQMLEGLGTQFEKEGLLDKYRKPRLN---AAYME 495
+ + A +RL +DE LQ G R Y L G PR++ AA M
Sbjct: 241 TQRERASERLTYDEAIGLQWGLVARRYSELSESGPA-----------APRIDDGLAAAMR 289
Query: 496 GWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
G LP+ LT+ Q + I +L PMNR+LQG+VG GKT+V+ LA ++
Sbjct: 290 G----------RLPFELTTGQAEVLEVISDELASTRPMNRMLQGEVGSGKTIVSVLAMLQ 339
Query: 556 VIGSGYQAAFMVPTELLATQHYEHL------LKLLDNMEEDKHKPKIALLTGSTPVKQSR 609
++ +GYQ A + PTE+LA QH + L + + + +ALLTGS V Q R
Sbjct: 340 MVDAGYQCALLAPTEVLAVQHARSIRDVLGPLAMAGQLGGVESATGVALLTGSMTVPQKR 399
Query: 610 MIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSS 669
+R ++ +G +V+GTH+++ E VEF L + +VDEQ RFGV QR +K
Sbjct: 400 AVRNEVASGQAGIVVGTHAVLQEAVEFHNLGMVVVDEQHRFGVEQRDTLRAK-------- 451
Query: 670 GMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYI 729
DG + PH+L M+ATPIPRT+AL +YGD+ + + +LP GR PI T
Sbjct: 452 -----ARDG-------LTPHLLVMTATPIPRTVALTVYGDLETSTLRELPRGRQPITTNT 499
Query: 730 I 730
I
Sbjct: 500 I 500
>gi|225859451|ref|YP_002740961.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 70585]
gi|418200726|ref|ZP_12837169.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47976]
gi|419443221|ref|ZP_13983247.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA13224]
gi|419523968|ref|ZP_14063543.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA13723]
gi|225721463|gb|ACO17317.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 70585]
gi|353864267|gb|EHE44185.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47976]
gi|379550686|gb|EHZ15783.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA13224]
gi|379556376|gb|EHZ21431.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA13723]
Length = 671
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 163/531 (30%), Positives = 256/531 (48%), Gaps = 97/531 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ QML+ + + GL+ + + ++ A +
Sbjct: 197 LAEYKQALRRIKFEELFYFQMQ--LQMLKS-ENRVQGSGLVLNWSQEKVTAVKV------ 247
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
+LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +G
Sbjct: 248 ------SLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTAG 301
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+
Sbjct: 302 YQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGEA 354
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 355 DLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN-- 398
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 -------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|302874760|ref|YP_003843393.1| ATP-dependent DNA helicase RecG [Clostridium cellulovorans 743B]
gi|302577617|gb|ADL51629.1| ATP-dependent DNA helicase RecG [Clostridium cellulovorans 743B]
Length = 687
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 164/532 (30%), Positives = 247/532 (46%), Gaps = 80/532 (15%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
I + G+ + L G Y L LL +FPR Y ++ +++ I I
Sbjct: 13 IKNLKGVGPKALQLLNKSGIYNLLDLLLYFPREYENITSSED----------ITNINGKE 62
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFL 330
+K C L + D+ + + F G F P++
Sbjct: 63 KLKIKC--KVLRIF------------PDKRTKTGKTITTIAFSDGENTFYGKWFNQ-PYV 107
Query: 331 KSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKG 390
K K+ + + + G+V+ + + YE+ N K+++D ++ P YP K
Sbjct: 108 KK---KYFIDKEYTLIGEVKKVGKD--YEIS--NPKDFKEKEDKE-KSDKNIIPKYPLKA 159
Query: 391 GLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKR 450
GL + I L+A+ + +P+ I +++ L L A IH PK + A +R
Sbjct: 160 GLTNNFFIKLITSILEAMFIR-ENLPEWIIEKYKLCSLDYAIRNIHYPKEENALRAAERR 218
Query: 451 LIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPY 510
L F E F L L +L +Y K + L L +LP+
Sbjct: 219 LKFQELFTYSLKIL---------------MLKEYVKSNKEGIAFKIAPELV-DLKNSLPF 262
Query: 511 SLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTE 570
LT +Q A+ EI+ D+K+P PMNRLLQGDVG GKT+VA +A + YQ M PTE
Sbjct: 263 QLTDAQSKAVREILSDMKKPTPMNRLLQGDVGSGKTIVALIALFNAAKNQYQGVLMAPTE 322
Query: 571 LLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLI 630
+LA QHY ++++ KI LLTGST KQ I+++++ G I ++IGTH+LI
Sbjct: 323 ILANQHYHEFIRIMAPFN-----IKIELLTGSTTKKQKERIKEEIKGGKIDILIGTHALI 377
Query: 631 AEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHV 690
+ V+F L + + DEQ RFGV+QR + +K G D V
Sbjct: 378 EDDVQFENLGIIVTDEQHRFGVMQRNKLFNK----------------GKNID-------V 414
Query: 691 LAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYK 742
L M+ATPIPRTLAL LYGD+ ++ I LPPGR I+T G +K +N+Y+
Sbjct: 415 LVMTATPIPRTLALYLYGDLEVSIIDQLPPGREKIETK--HGTKKQRDNIYE 464
>gi|421211566|ref|ZP_15668548.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2070035]
gi|421232400|ref|ZP_15689041.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2080076]
gi|395572674|gb|EJG33269.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2070035]
gi|395594903|gb|EJG55138.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2080076]
Length = 671
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 163/531 (30%), Positives = 256/531 (48%), Gaps = 97/531 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ QML+ + + GL+ + + ++ A +
Sbjct: 197 LAEYKQALRRIKFEELFYFQMQ--LQMLKS-ENRVQGSGLVLNWSQEKVTAVKV------ 247
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
+LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +G
Sbjct: 248 ------SLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTAG 301
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+
Sbjct: 302 YQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGEA 354
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 355 DLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN-- 398
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 -------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|421268856|ref|ZP_15719725.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae SPAR95]
gi|395869110|gb|EJG80226.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae SPAR95]
Length = 671
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 163/531 (30%), Positives = 256/531 (48%), Gaps = 97/531 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ QML+ + + GL+ + + ++ A +
Sbjct: 197 LAEYKQALRRIKFEELFYFQMQ--LQMLKS-ENRVQGSGLVLNWSQEKVTAVKV------ 247
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
+LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +G
Sbjct: 248 ------SLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTAG 301
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+
Sbjct: 302 YQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGEA 354
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 355 DLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN-- 398
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 -------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|427400308|ref|ZP_18891546.1| ATP-dependent DNA helicase RecG [Massilia timonae CCUG 45783]
gi|425720582|gb|EKU83501.1| ATP-dependent DNA helicase RecG [Massilia timonae CCUG 45783]
Length = 686
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/357 (38%), Positives = 189/357 (52%), Gaps = 53/357 (14%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIH-QPKHID 442
P+YP+ GL+ ++LR IA A++ + + D VP I + GL+ A +H P +D
Sbjct: 142 PVYPAGEGLSQTVLRRAIADAMKRIDWS-DTVPAGIRAKMGLIDFEPAVKLLHYPPADVD 200
Query: 443 EADLARK------RLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLN--AAYM 494
E L K R+ FDE QL L + ++ R A ++
Sbjct: 201 EHALGEKSHPAWERMKFDELLAQQLS------------------LKRAQRARREKGAPHL 242
Query: 495 EGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACM 554
L++ L ALP+ LT +Q + EI DL + PM RLLQGDVG GKTVV+ LA
Sbjct: 243 RAVGKLSEAFLAALPFKLTGAQQRVVEEIRTDLAEGYPMQRLLQGDVGSGKTVVSALAAA 302
Query: 555 EVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKD 614
+ I SGYQAA M PTE+LA QH+ + ++ + K+A LTGS K+ +
Sbjct: 303 QAIDSGYQAALMAPTEILAEQHFRKIAAWMEPL-----GVKVAWLTGSLKKKEKAASNEL 357
Query: 615 LQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMV 674
+++G+ LVIGTH+LI + V+F+ L L IVDEQ RFGV QR +K
Sbjct: 358 IESGEANLVIGTHALIQDTVQFAKLGLVIVDEQHRFGVGQRLTLRNK------------- 404
Query: 675 NSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
SDG + PH L MSATPIPRTLA+ Y D+ ++ I +LPPGR PI T I+
Sbjct: 405 GSDG-------LVPHQLMMSATPIPRTLAMTYYADLEVSVIDELPPGRSPIVTRAID 454
>gi|338211991|ref|YP_004656044.1| ATP-dependent DNA helicase RecG [Runella slithyformis DSM 19594]
gi|336305810|gb|AEI48912.1| ATP-dependent DNA helicase RecG [Runella slithyformis DSM 19594]
Length = 703
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 149/442 (33%), Positives = 224/442 (50%), Gaps = 68/442 (15%)
Query: 300 VVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEG--KH--KVGEFVCVSGKVRAMRSN 355
+V + G K+++ + +F GT + +SI+ KH + GE++ + R
Sbjct: 76 MVVVGEGYKRRLTV---EFTDGTGVVEFVYFQSIDWHLKHFKEGGEYIAYG---KPQRYG 129
Query: 356 NHYEMREYNIDVLKDEDDLSLRAKGRPYPIYP-----SKGGLNASLLRDTIARALQALPA 410
+ I+ + E++ G P+Y K L++ L + L+
Sbjct: 130 QRFNFSHPEIETINPENE----NGGYFQPVYNLTETLRKKHLDSRFLSKIMRTLLELSTP 185
Query: 411 NF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQL----GRLY 465
+F + +P+E+ ++F L DA IH P+ + A +RL F+E FY QL ++
Sbjct: 186 HFKETLPEELVRKFRLFSKTDAMWNIHLPESEAALNQALRRLKFEELFYNQLRLIKNKIL 245
Query: 466 QMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIW 525
E G F L+ ++ Y EG ++P+ LT++Q + EI
Sbjct: 246 HKTEYPGQIFTNLDLVKQF--------YTEG----------SMPFELTNAQKRVLREIHD 287
Query: 526 DLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLD 585
DLK MNRLLQGDVG GKT+VAF+A + IG+G QA M PTE+LA QHY L +
Sbjct: 288 DLKTGKHMNRLLQGDVGSGKTIVAFIAMLMAIGNGAQACIMAPTEILADQHYRGLKGFAE 347
Query: 586 NMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVD 645
+ KIALLTGST K ++I DL G+I +++GTH+L+ + V+F L L I+D
Sbjct: 348 AL-----GLKIALLTGSTTKKGRKLIFPDLADGNIHIIVGTHALLEDPVQFKNLGLCIID 402
Query: 646 EQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALA 705
EQ RFGV QR + +K + + PH+L M+ATPIPRTLA+
Sbjct: 403 EQHRFGVAQRAKLWAK---------------------NPTIPPHILVMTATPIPRTLAMT 441
Query: 706 LYGDMSLTQITDLPPGRIPIKT 727
LYGD+ ++ I +LP GR PIKT
Sbjct: 442 LYGDLDVSIIDELPAGRKPIKT 463
>gi|429757452|ref|ZP_19289988.1| putative ATP-dependent DNA helicase RecG [Actinomyces sp. oral
taxon 181 str. F0379]
gi|429175122|gb|EKY16575.1| putative ATP-dependent DNA helicase RecG [Actinomyces sp. oral
taxon 181 str. F0379]
Length = 718
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 169/540 (31%), Positives = 255/540 (47%), Gaps = 84/540 (15%)
Query: 217 LSKRLYHQLENCGFYTLRKLLHHFPRTY---ADLQNAQIDLDDGQYFIFIGEIISSRGM- 272
L +L +LE G T+ LL+ PR Y L + L G+ + E++S+R +
Sbjct: 12 LPAKLAKKLEKAGILTVGDLLYDAPRRYYHWGALTPMHV-LRPGEDVTILAEVVSARLIP 70
Query: 273 ---KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPF 329
+AG F V + G + T F S P+
Sbjct: 71 NRSRAGVRFE---------------------VRLTDGSSE---------MTATFFASSPY 100
Query: 330 LKSI-EGKHKVGEFVCVSGKVRAMRSNNHYEMREYN-IDVLKDEDDLSLRAKGRPYPIYP 387
S+ E + GE +GKV R N E+ +D + D+ R+ RP PIY
Sbjct: 101 KLSVHERLLQPGESFLFAGKVGEYRGNLQLVHPEFEGVDDEQAAPDIEKRSN-RPIPIYS 159
Query: 388 SKGGLNASLLRDTIARALQALPANF--DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
S+GG+ + ++ IA L +L + DPVP +I F + L A +HQ +
Sbjct: 160 SRGGVTSWVIARAIAVVLDSLDLDALPDPVPMQIRLRFDIEALGHALRLLHQGSTDQDVA 219
Query: 446 LARKRLIFDEFFYLQ--LGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
A++ + + E F LQ L + + L Q E P L A +++G
Sbjct: 220 RAKRSMRWREAFVLQAFLAKRRLGNDALRAQSCPEN------PPELQA-FLDG------- 265
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
LP++LT SQ SAIS I D+ PM RLL+GDVG GKTVVA A ++VI +G+Q
Sbjct: 266 ----LPFTLTPSQRSAISAIGADIASSHPMQRLLEGDVGSGKTVVACAALIQVIAAGHQG 321
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A + PTE+LA QH + + LL +E + LLT STP R I + L +G +V
Sbjct: 322 ALLAPTEVLARQHADSIRTLLKPLESVGFPVDLRLLTSSTPAPARREIERLLASGMPIIV 381
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GTH+L+ + F+ L LA++DEQ RFGV QR +DG
Sbjct: 382 VGTHALLYARNLFADLALAVIDEQHRFGVQQRDALRES-------------RNDG----- 423
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE-GNEKGYENVYK 742
+ H L M+ATPIPR++A+ ++GD+ +T + LP GR P+ T++++ GN E +++
Sbjct: 424 --LLVHQLVMTATPIPRSVAMTIFGDLDVTVMKGLPSGRKPVTTFVVDAGNAVWMERMWQ 481
>gi|167759036|ref|ZP_02431163.1| hypothetical protein CLOSCI_01383 [Clostridium scindens ATCC 35704]
gi|167663443|gb|EDS07573.1| ATP-dependent DNA helicase RecG [Clostridium scindens ATCC 35704]
Length = 676
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 133/350 (38%), Positives = 190/350 (54%), Gaps = 46/350 (13%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
P+Y GL+ +++ + +AL L + +P E+ ++GL A GIH P+ +
Sbjct: 146 PVYGLTAGLSNNVVAKAMHQALSQLDLTRETLPDELRLKYGLAEYNYAIRGIHFPEDKEV 205
Query: 444 ADLARKRLIFDEF--FYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
AR+RL+F+EF F L + ++ E + E E ++ RKP ++
Sbjct: 206 FYHARERLVFEEFLEFILSIRKMKDKNE----RIENEYIVQ--RKPEVD----------- 248
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
+L+ LPY LT +Q EI D+ M+RL+QGDVG GKT+VA LA + V +GY
Sbjct: 249 -ELIGRLPYELTKAQKKVWDEIAHDMASDTAMSRLVQGDVGSGKTIVAVLALISVALNGY 307
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q A M PTE+LA QHY+ + +LL EE K K+ LLTGS K+ R ++ G
Sbjct: 308 QGAMMAPTEVLARQHYDSITRLL---EEYGIKIKVELLTGSMTAKEKRRAYDRIECGYAR 364
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
++IGTH+LI ++V + L L + DEQ RFGV QR F K GM
Sbjct: 365 IIIGTHALIQDRVYYDCLALVVTDEQHRFGVKQREAFARK-------GGM---------- 407
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
PHVL MSATPIPRTLA+ LYGD+ ++ I +LP R+PIK ++E
Sbjct: 408 ------PHVLVMSATPIPRTLAIILYGDLDISVIDELPANRLPIKNCVVE 451
>gi|237649235|ref|ZP_04523487.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae CCRI
1974]
gi|237821995|ref|ZP_04597840.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae CCRI
1974M2]
Length = 671
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 163/531 (30%), Positives = 256/531 (48%), Gaps = 97/531 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ QML+ + + GL+ + + ++ A +
Sbjct: 197 LAEYKQALRRIKFEELFYFQMQ--LQMLKS-ENRVQGSGLVLNWSQEKVTAVKV------ 247
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
+LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +G
Sbjct: 248 ------SLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTAG 301
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+
Sbjct: 302 YQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGEA 354
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 355 DLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN-- 398
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 -------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|336320279|ref|YP_004600247.1| DEAD/DEAH box helicase domain protein [[Cellvibrio] gilvus ATCC
13127]
gi|336103860|gb|AEI11679.1| DEAD/DEAH box helicase domain protein [[Cellvibrio] gilvus ATCC
13127]
Length = 745
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 160/546 (29%), Positives = 255/546 (46%), Gaps = 93/546 (17%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN----AQIDLDDGQYFIF 262
LD+ I V + RL + E G + LL ++PR YAD A +++D +
Sbjct: 14 LDRPIGKV---APRLGPKFEALGVHVAGDLLRYYPRRYADPSRLTDIAGLEID--EKASI 68
Query: 263 IGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNI-----DSGQKKKIYLHLKK 317
+ E+ SS G+ + L V + + T G V+++ G K ++
Sbjct: 69 VAEVRSSSGVLRARTSGKLRV-------EAQVTDGHAVLHLAFFAQREGMAKAFAAQMRP 121
Query: 318 FFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDD--LS 375
RG FT KVG F N ++ + V D DD +
Sbjct: 122 GRRGL-FTG-----------KVGWF------------NGRAQLANPAV-VWFDADDEGAA 156
Query: 376 LRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANF--DPVPKEITQEFGLLCLFDAYM 433
+ RP P+YP+ L+++ + T+ L L DPVP E+ QE G L A
Sbjct: 157 IEHAERPIPVYPASATLDSAKIATTVQVVLDGLRDGDVPDPVPAEVRQERGYGELLPALR 216
Query: 434 GIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAY 493
+H+P+ + +A++R ++E F LQ L + + +P +
Sbjct: 217 RLHRPETEQDWRVAQQRQRYEEAFVLQ--------AELARRRVRAAAQAAVARPPVPGGL 268
Query: 494 MEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLAC 553
++ + + LP++LT+ Q +I ++ +PVPM RLLQG+VG GKTVVA A
Sbjct: 269 LDAFDAR-------LPFALTAGQREVGEQIAQEIARPVPMQRLLQGEVGSGKTVVALRAM 321
Query: 554 MEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEED------KHKPKIALLTGSTPVKQ 607
++V+ +G QAA + PTE+LA QH L LL ++ E +H ++ LLTGS
Sbjct: 322 LQVVDAGGQAALLAPTEVLAAQHARSLRALLGDLAEGGLLGGAEHGTRVTLLTGSVTGAA 381
Query: 608 SRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSM 667
R D +G +V+GTH+L+ + V+F+ L L +VDEQ RFGV QR +K
Sbjct: 382 RRTALLDAASGAAGIVVGTHALLEKNVQFAELGLVVVDEQHRFGVEQRDALRAKAAAQ-- 439
Query: 668 SSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
PH+LAM+ATPIPRT+A+ ++GD+ + + +LP GR PI +
Sbjct: 440 --------------------PHLLAMTATPIPRTVAMTVFGDLETSVLRELPAGRSPITS 479
Query: 728 YIIEGN 733
+++ +
Sbjct: 480 FVVPAD 485
>gi|315640125|ref|ZP_07895247.1| DNA helicase RecG [Enterococcus italicus DSM 15952]
gi|315484102|gb|EFU74576.1| DNA helicase RecG [Enterococcus italicus DSM 15952]
Length = 674
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 160/524 (30%), Positives = 244/524 (46%), Gaps = 93/524 (17%)
Query: 209 KCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEII 267
+ ++ + G+ K+ L G ++ LL ++P Y D+Q Q+ ++ D + G ++
Sbjct: 2 QSVAVLAGVGKKRQQALAELGIESIESLLTYYPFRYEDVQQRQLAEIQDQEKVTLKGTVV 61
Query: 268 SSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
S M F + + + + Q + ++ F +
Sbjct: 62 SPAVM---SRFGYKKTRLQFRMM----------------QDRDVF--------QVSFFNQ 94
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYP 387
P+LK K + E + V GK A R + I +D + P+Y
Sbjct: 95 PYLKD---KIILSEEIVVYGKWDAKRKA----LTGMKIFGSGKQDSFA--------PVYH 139
Query: 388 SKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKHIDEADL 446
+ + L+D I +A + + P ++ ++ L+ A +H P +D
Sbjct: 140 VSKKIRQATLQDLIKQAFAQFGEQIEEILPVQLVDKYRLMERKQAIYAMHFPDDMDTYRQ 199
Query: 447 ARKRLIFDEFFYLQLGRLYQM-LEGL--GTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
A++R++F+EFF L+QM L+GL + E GL Y +L A
Sbjct: 200 AKRRVVFEEFF------LFQMKLQGLKQAEKAEVNGLCLSYDAKQLKA------------ 241
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
++ LP+ LT +Q +EI DLK P M RLLQGDVG GKT+VA +A I +G+Q
Sbjct: 242 FIQKLPFELTDAQKRVTNEICADLKSPKHMQRLLQGDVGSGKTIVAAIALYATITAGFQG 301
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A MVPTE+LA QH E + L M+ +ALLTGST K+ + I ++ G I ++
Sbjct: 302 ALMVPTEILAQQHMESFVSLFAAMD-----VTVALLTGSTKTKERKHILAGIKDGSIDIL 356
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
IGTH+LI E V+F+ L L I DEQ RFGV QR K +
Sbjct: 357 IGTHALIQEDVDFAQLGLVITDEQHRFGVNQRKVLREKGW-------------------- 396
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLA+ YG+M ++ I +LP GRIPI+T
Sbjct: 397 ---KPDVLFMTATPIPRTLAITAYGEMDVSLIDELPKGRIPIET 437
>gi|423301660|ref|ZP_17279683.1| ATP-dependent DNA helicase RecG [Bacteroides finegoldii CL09T03C10]
gi|408471653|gb|EKJ90184.1| ATP-dependent DNA helicase RecG [Bacteroides finegoldii CL09T03C10]
Length = 698
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 170/520 (32%), Positives = 246/520 (47%), Gaps = 105/520 (20%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNAQ-IDLDDGQ--YFIFIGEIISSRGMKAGCSFSFLE 282
+ G Y+L L+++FP Y D I DG Y GEI+ G +A
Sbjct: 25 KELGIYSLHDLIYYFPYKYVDRSRIYYIHEIDGNMPYIQLKGEIL---GFEA-------- 73
Query: 283 VIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIE---GKHKV 339
I G+++++ H F GT + + + I+ GK+K+
Sbjct: 74 --------------------IGEGRQRRLTAH---FSDGTGVVDLVWFQGIKYILGKYKL 110
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG-RPYPIYPSK---GGLNAS 395
E + GK N + +ID D+L L + G +PY K LN+
Sbjct: 111 HEEYIIFGKPTVF--NGRINVAHPDID---KSDELKLSSVGLQPYYNTTEKMKRSFLNSH 165
Query: 396 LLRDTIARALQALPANFDPVPKEIT----QEFGLLCLFDAYMGIHQPKHIDEADLARKRL 451
+ +A +Q + +P+P+ ++ E L+ L +A IH P + D A+ RL
Sbjct: 166 AIEKMMATVIQQIQ---EPLPETLSPKLLAEHHLMPLTEALRNIHFPANPDLLRRAQYRL 222
Query: 452 IFDEFFYLQLGRLY----QMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRA 507
F+E FY+QL L + G FEK G + N Y +
Sbjct: 223 KFEELFYVQLNILRYAKDRQRRYRGYVFEKVGDV-------FNTFYA-----------KN 264
Query: 508 LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMV 567
LP+ LT +Q + EI D+ MNRLLQGDVG GKT+VA ++ + + +GYQA M
Sbjct: 265 LPFQLTGAQKRVLKEIRNDVGSGRQMNRLLQGDVGSGKTLVALMSMLLALDNGYQACMMA 324
Query: 568 PTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTH 627
PTE+LA QHYE + +LL M+ ++ LLTGS K+ I L TGD+ ++IGTH
Sbjct: 325 PTEILANQHYETIKELLFGMD-----IRVELLTGSIKGKKREAILSGLLTGDVHILIGTH 379
Query: 628 SLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMA 687
++I + V FS+L ++DEQ RFGV QR R SK +
Sbjct: 380 AVIEDTVNFSSLGFVVIDEQHRFGVAQRARLWSK----------------------NNQP 417
Query: 688 PHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
PHVL M+ATPIPRTLA+ LYGD+ ++ I +LPPGR PI T
Sbjct: 418 PHVLVMTATPIPRTLAMTLYGDLDVSVIDELPPGRKPITT 457
>gi|291531081|emb|CBK96666.1| ATP-dependent DNA helicase RecG [Eubacterium siraeum 70/3]
Length = 677
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 171/547 (31%), Positives = 257/547 (46%), Gaps = 102/547 (18%)
Query: 203 IEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQ--NAQIDL-DDGQY 259
I+ + D + + G+ ++ LE G T +L H+PR Y D A DL +DG+
Sbjct: 4 IKKIPDSPVCYIKGVGEKRAKLLEKLGITTALQLAEHYPRGYIDFNETTAISDLVNDGEN 63
Query: 260 FIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFF 319
+ + I++ + + +V+V +GD ++ F
Sbjct: 64 HV-VKAIVTKKFPAYYGRINIFKVLVS-------DGTGDMLITF--------------FN 101
Query: 320 RGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAK 379
FT + K+ C GK+ + +E N V D D
Sbjct: 102 SDYSFTRL----------KLDNEYCFYGKMAG-----DFLRKEMNSPVFIDSQD-----P 141
Query: 380 GRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEIT----QEFGLLCLFDAYMGI 435
+ P Y G++ ++ + I L+ P+ +T +++ L+ +A I
Sbjct: 142 NKLMPRYSLTTGISQGIMSNCIKNVLRDFT-----FPEHLTDTLMKKYSLISYDNALRWI 196
Query: 436 HQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYME 495
H P++ ++ D A+ RL F+E F LQLG L M K RK RL A ME
Sbjct: 197 HFPENKEQYDKAKYRLTFEELFLLQLG-LKSM---------------KNRKKRLAGAPME 240
Query: 496 GWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
S + +LP++LT +Q+ AISE D+++ VPMNRLLQGDVG GKT VA A
Sbjct: 241 NKS--IDEYYSSLPFTLTGAQIRAISECCDDMQKSVPMNRLLQGDVGSGKTAVAAGAAYF 298
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
+GYQ+ M PTE+LA QHY+ L K L + IALLTGS Q + IR+ +
Sbjct: 299 AYLNGYQSTLMAPTEILAKQHYDTLYKFLAPL-----GVTIALLTGSQTPAQKKQIRQLI 353
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
G I + +GT +LI + FS+L L I DEQ RFGV QR SK
Sbjct: 354 ADGQIDVAVGTQALIQKSTRFSSLGLVITDEQHRFGVGQRAALGSK-------------- 399
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
G+ PH+L MSATPIPRTL + +YGD+ ++ + ++P GR+PI+TY ++ + +
Sbjct: 400 --GN-------EPHILVMSATPIPRTLGMIIYGDLDISILDEMPKGRLPIRTYAVDTSYR 450
Query: 736 GYENVYK 742
E +YK
Sbjct: 451 --ERLYK 455
>gi|406939550|gb|EKD72547.1| hypothetical protein ACD_45C00646G0002 [uncultured bacterium]
Length = 699
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 164/536 (30%), Positives = 250/536 (46%), Gaps = 96/536 (17%)
Query: 216 GLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFIGEIISSRGMK 273
G+ KR+ +L + G + ++ LL H P Y D DL G++ + GEI ++ K
Sbjct: 20 GVGKRIAERLAHIGIWHVQDLLFHLPLRYQDRTRVYPIRDLIPGEHVVVEGEIETTMMPK 79
Query: 274 AGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSI 333
G + L C I D+ +G+ + + ++ R
Sbjct: 80 GGRTRLLL-----C-IKDS------------TGRLRLRFFYVNTLQRNAL---------- 111
Query: 334 EGKHKVGEFVCVSGKVRAM---RSNNHYEMREYNID-VLKDEDDLSLRAKGRPYPIYPSK 389
++G + G+VR H E R D V E++L+ PIYP+
Sbjct: 112 ----QIGARIRCYGEVRLGPYGLEMIHPEYRIVTADFVAPTEENLT--------PIYPAT 159
Query: 390 GGLNASLLRDTIARALQALPAN---FDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL 446
GL+ +LR +ALQ + + +P I Q+ L DA +H+P D+
Sbjct: 160 DGLSQLMLRKLTQQALQLMATGGLLHEILPTTILQKLTFPSLKDALQFVHRPPKNAPLDM 219
Query: 447 -------ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSS 499
++KRL+F+E +L L+ L F+ + A +
Sbjct: 220 LVAGRHVSQKRLVFEELLAHRLSLLH-----LKNTFQVQ-----------QAVALNNPGC 263
Query: 500 LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
L ++ + ALP+ LTS+Q EI +DL Q PM RL+QGDVG GKTVVA LA ++ + S
Sbjct: 264 LLQQFITALPFQLTSAQKKVAEEIRYDLLQSHPMLRLVQGDVGSGKTVVAVLAMLQAVES 323
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
GYQAA + PTELLA QHY+ L K L+ + K K+ LL+G R + +
Sbjct: 324 GYQAAMLAPTELLAVQHYQVLQKWLEPL-----KIKVVLLSGRMKAALRRAALTRIAAHE 378
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
+V+GTH++ ++VEF+ L L IVDEQ RFGV QR K +
Sbjct: 379 AHVVVGTHAIFQKEVEFAKLVLVIVDEQHRFGVQQRALLREKGVH--------------- 423
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
+ PH L M+ATPIPRTLA+++Y D+ + I +LPPGR P+ T ++ + +
Sbjct: 424 ----EQYCPHQLIMTATPIPRTLAMSVYADLDYSVINELPPGRTPVITRVMANSHR 475
>gi|421236785|ref|ZP_15693382.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2071004]
gi|395601548|gb|EJG61695.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2071004]
Length = 671
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 165/532 (31%), Positives = 257/532 (48%), Gaps = 99/532 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK---FFRGT 322
+++ ++ + F ++ ++ LK+ F T
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVT 93
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
F P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQ-PYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------ 137
Query: 382 PYPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPK 439
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 --PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPK 195
Query: 440 HIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSS 499
+ E A +R+ F+E FY Q+ QML+ + + GL+ + + ++ A +
Sbjct: 196 DLAEYKQALRRIKFEELFYFQMQ--LQMLKS-ENRVQGSGLVLNWSQEKVTAVKV----- 247
Query: 500 LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
+LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +
Sbjct: 248 -------SLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTA 300
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
GYQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+
Sbjct: 301 GYQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGE 353
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 354 ADLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN- 398
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 --------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|410477066|ref|YP_006743825.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae
gamPNI0373]
gi|444388779|ref|ZP_21186751.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae
PCS125219]
gi|444389202|ref|ZP_21187119.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae PCS70012]
gi|444392729|ref|ZP_21190427.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae PCS81218]
gi|444394879|ref|ZP_21192429.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae PNI0002]
gi|444398148|ref|ZP_21195631.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae PNI0006]
gi|444399767|ref|ZP_21197202.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae PNI0007]
gi|444402578|ref|ZP_21199738.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae PNI0008]
gi|444405612|ref|ZP_21202480.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae PNI0009]
gi|444407768|ref|ZP_21204435.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae PNI0010]
gi|444418278|ref|ZP_21214265.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae PNI0360]
gi|444419694|ref|ZP_21215538.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae PNI0427]
gi|406370011|gb|AFS43701.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae
gamPNI0373]
gi|444248181|gb|ELU54696.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae
PCS125219]
gi|444257802|gb|ELU64135.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae PCS70012]
gi|444259497|gb|ELU65811.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae PNI0002]
gi|444260805|gb|ELU67113.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae PNI0006]
gi|444262959|gb|ELU69204.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae PCS81218]
gi|444266253|gb|ELU72218.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae PNI0008]
gi|444268243|gb|ELU74116.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae PNI0007]
gi|444271364|gb|ELU77115.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae PNI0010]
gi|444272633|gb|ELU78326.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae PNI0009]
gi|444281784|gb|ELU87083.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae PNI0360]
gi|444286349|gb|ELU91337.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae PNI0427]
Length = 671
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 163/531 (30%), Positives = 256/531 (48%), Gaps = 97/531 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKVLD------QVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ QML+ + + GL+ + + ++ A +
Sbjct: 197 LAEYKQALRRIKFEELFYFQMQ--LQMLKS-ENRVQGSGLVLNWSQEKVTAVKV------ 247
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
+LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +G
Sbjct: 248 ------SLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTAG 301
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+
Sbjct: 302 YQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGEA 354
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 355 DLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN-- 398
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 -------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|28210919|ref|NP_781863.1| ATP-dependent DNA helicase RecG [Clostridium tetani E88]
gi|28203358|gb|AAO35800.1| ATP-dependent DNA helicase recG [Clostridium tetani E88]
Length = 683
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 155/534 (29%), Positives = 249/534 (46%), Gaps = 84/534 (15%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN--AQIDLDDGQYFIFIGEIIS 268
+ + G+ + L CG +T+ LL +FPR Y ++ + D + Q I E++
Sbjct: 7 VGVLKGVGPKTLENLNKCGIFTIIDLLLYFPRDYKIIKTCTSLKDALEKQEIIITAEVLE 66
Query: 269 SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNID-SGQKKKIYLHLKKFFRGTRFTSI 327
+ D T SG + I ++++I R+ +
Sbjct: 67 IK-------------------RDVRTRSGKVISTIILQNEEERI---------KCRWFNQ 98
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYP 387
P++K+ + ++G+ ++GK+ + E N ++ + + K PIYP
Sbjct: 99 PYIKN---RFRIGKKYTLNGKLDVYKG----EKLIINPKTVEKNAEATNCTKEIVIPIYP 151
Query: 388 SKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA 447
+ G+ + L I L L + + +P I +++ L ++ IH P + + A
Sbjct: 152 LREGVKNNTLVKLIKDVLDKLIID-ENLPTWIMKKYNFCSLDESIRAIHNPISESQLEFA 210
Query: 448 RKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRA 507
++RL F E F L K LL + RK + + KL
Sbjct: 211 KRRLKFQELFTYSL---------------KIALLKESRKQSNKGISFKIYKEEINKLQDK 255
Query: 508 LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMV 567
L + LT +Q + EI+ D + + MNRL+QGDVG GKT++A + + V +GYQ MV
Sbjct: 256 LNFQLTKAQKIVLEEILKDQNKNISMNRLVQGDVGSGKTILAIITLLNVAMNGYQGVLMV 315
Query: 568 PTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTH 627
PTE+LA QH+ + LL + ++ LL GST K+ I+ L+ G+I ++IGTH
Sbjct: 316 PTEILAQQHFIEIKNLL-----SEFNIRVELLCGSTSNKEKSNIKAALKGGEIDIIIGTH 370
Query: 628 SLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMA 687
+LI + VEF L + I DEQ RFGV+QR + +K G D
Sbjct: 371 ALIEDDVEFEKLGIVITDEQHRFGVMQRNKLFTK----------------GEGAD----- 409
Query: 688 PHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVY 741
+L M+ATPIPRTL+L LYGD+ ++ I +LPPGR + TY I NEK + +Y
Sbjct: 410 --ILVMTATPIPRTLSLYLYGDLDISIIDELPPGRQKVDTYFI--NEKKRDRIY 459
>gi|403251466|ref|ZP_10917806.1| RecG-like helicase [actinobacterium SCGC AAA027-L06]
gi|402915226|gb|EJX36209.1| RecG-like helicase [actinobacterium SCGC AAA027-L06]
Length = 728
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 162/528 (30%), Positives = 238/528 (45%), Gaps = 79/528 (14%)
Query: 220 RLYHQLENC-GFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSF 278
R L+N G T+ LL H+PR Y + GE+ + A
Sbjct: 15 RTAQVLDNSFGISTVNDLLRHYPRRY----------------VVRGELTDISTLVADDEV 58
Query: 279 SFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHK 338
+ L I ++ + EV+ D L L F + R E +
Sbjct: 59 TILAEIEAVKLRRANGKNILEVIVTDGSAN----LSLTFFNQAWR----------EKDLR 104
Query: 339 VGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDE-DDLSLRAKGRPYPIYPSKGGLNASLL 397
G +GK+ + +Y + D D+ G+ P+YP+ L + +
Sbjct: 105 AGRVGLFAGKIGVFKGRRQLSHPDYQLIPDGDNVDEAVAEFAGKFLPVYPATAKLPSWKI 164
Query: 398 RDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDE-- 455
+ AL +L D +P EITQ+F L A++ IHQP + A+ AR RL FDE
Sbjct: 165 MQCMKLALDSLDDFPDYLPSEITQQFAYPILKKAFLDIHQPPDLQSAENARNRLTFDEAL 224
Query: 456 FFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSS 515
L LG+ + L T+ P L AA+ + LP+ T+
Sbjct: 225 LLQLLLGQRRAEIVKLSTKSRTPN------TPLLVAAFE-----------KTLPFEFTAG 267
Query: 516 QLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQ 575
Q + EI DL PM+RLLQG+VG GKTVVA A + V+ SG Q A + PTE+LA Q
Sbjct: 268 QSAVNDEIEKDLSNNYPMHRLLQGEVGSGKTVVALRAMLSVVDSGGQTALLAPTEVLAQQ 327
Query: 576 HYEHLLKLL------DNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSL 629
HY + +LL +E K+ LLTGS + ++I +L +G+ +VIGTH+L
Sbjct: 328 HYRTITQLLGKLAQAGTLEASDIGTKVELLTGSLSTAEKKLIHSNLASGETGIVIGTHAL 387
Query: 630 IAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPH 689
I++ V F L L +VDEQ RFGV QR K PH
Sbjct: 388 ISDGVVFKDLGLVVVDEQHRFGVEQRDALRMK----------------------AKQPPH 425
Query: 690 VLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGY 737
+L M+ATPIPRT+A+ ++GD+ ++ + +LP GR+ I T++I EK +
Sbjct: 426 LLVMTATPIPRTVAMTVFGDLDISTLKELPKGRVAITTHVIPVLEKPH 473
>gi|182684639|ref|YP_001836386.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae CGSP14]
gi|303254307|ref|ZP_07340415.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae BS455]
gi|303258630|ref|ZP_07344610.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae SP-BS293]
gi|303261793|ref|ZP_07347739.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae
SP14-BS292]
gi|303263657|ref|ZP_07349579.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae BS397]
gi|303266833|ref|ZP_07352712.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae BS457]
gi|303269890|ref|ZP_07355632.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae BS458]
gi|387759808|ref|YP_006066786.1| ATP-dependent DNA helicase [Streptococcus pneumoniae INV200]
gi|418140021|ref|ZP_12776846.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA13338]
gi|418181051|ref|ZP_12817620.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA41688]
gi|419515201|ref|ZP_14054826.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae
England14-9]
gi|421296529|ref|ZP_15747238.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA58581]
gi|182629973|gb|ACB90921.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae CGSP14]
gi|301802397|emb|CBW35151.1| ATP-dependent DNA helicase [Streptococcus pneumoniae INV200]
gi|302598658|gb|EFL65696.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae BS455]
gi|302636876|gb|EFL67365.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae
SP14-BS292]
gi|302640131|gb|EFL70586.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae SP-BS293]
gi|302640568|gb|EFL70973.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae BS458]
gi|302643601|gb|EFL73869.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae BS457]
gi|302646695|gb|EFL76920.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae BS397]
gi|353843123|gb|EHE23168.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA41688]
gi|353904800|gb|EHE80250.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA13338]
gi|379635750|gb|EIA00309.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae
England14-9]
gi|395895402|gb|EJH06377.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA58581]
Length = 671
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 163/531 (30%), Positives = 256/531 (48%), Gaps = 97/531 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMFRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ QML+ + + GL+ + + ++ A +
Sbjct: 197 LAEYKQALRRIKFEELFYFQMQ--LQMLKS-ENRVQGSGLVLNWSQEKVTAVKV------ 247
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
+LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +G
Sbjct: 248 ------SLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTAG 301
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+
Sbjct: 302 YQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGEA 354
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 355 DLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN-- 398
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 -------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|383807630|ref|ZP_09963190.1| ATP-dependent DNA helicase RecG [Candidatus Aquiluna sp. IMCC13023]
gi|383298984|gb|EIC91599.1| ATP-dependent DNA helicase RecG [Candidatus Aquiluna sp. IMCC13023]
Length = 709
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 160/514 (31%), Positives = 252/514 (49%), Gaps = 83/514 (16%)
Query: 229 GFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFIGEIISS--RGMKAGCSFSFLEVI 284
G T+ LL HFPR Y+ L G+ +G++ S+ R MK G S EV+
Sbjct: 25 GIKTVADLLLHFPRRYSKRGELTDFASLPIGEVVTVVGQVQSTNQRSMK-GRKGSIFEVV 83
Query: 285 VGCEIADTETTSGDEVVNIDSGQKKKIYLH--LKKFFRGTRFTSIPFLKSIEGKHKVGEF 342
+G +G + + ++ LH ++ F G K+G F
Sbjct: 84 LG-------DGNGQLTLAFFNQTWRQAELHAGVQGLFSG----------------KIGAF 120
Query: 343 VCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR-PYPIYPSKGGLNASLLRDTI 401
SG+++ ++ YE+ ++ +++ D +A P PIYP+ G L++ ++ I
Sbjct: 121 ---SGRLQL--THPDYEL--FDAEII----DQQAKAWAELPIPIYPATGTLSSWRIQKAI 169
Query: 402 ARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQL 461
+ L A + +P ++ ++ L+ L + IH+PK + + A K L F E LQL
Sbjct: 170 EKVLDAGHEAQEVIPADLLEQQKLMPLLMSIEMIHRPKKDSDWERATKSLKFHEAMLLQL 229
Query: 462 GRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAIS 521
G LL++ + L A + +L K ALP+ LT Q+ A
Sbjct: 230 G-----------------LLERRKNAELEKAAVYRSGALLSKFDEALPFELTPGQVVAGD 272
Query: 522 EIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLL 581
+I DL + PMNR+LQG+VG GKTVVA A + V SG Q+A + PTE+LA+QH+ +
Sbjct: 273 QIAADLSKGHPMNRMLQGEVGSGKTVVALRAVLAVAESGGQSALLAPTEVLASQHFRSIA 332
Query: 582 KLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRL 641
+ L + + LLTG P+ + D+ +G+ LVIGTH+L++E V F L L
Sbjct: 333 QALGPAV--TKELGVRLLTGQQPLAVRKKTLLDMASGNCRLVIGTHALLSENVSFFDLGL 390
Query: 642 AIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRT 701
I+DEQ RFGV QR SK ++ PH L M+ATPIPRT
Sbjct: 391 VIIDEQHRFGVGQREALKSKAKHS----------------------PHSLVMTATPIPRT 428
Query: 702 LALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
LA+ ++GD+ ++ + +LP GR PI T++++ + K
Sbjct: 429 LAVTVFGDLDVSSLRELPKGRQPIVTHVVDISRK 462
>gi|227535922|ref|ZP_03965971.1| DNA helicase RecG [Sphingobacterium spiritivorum ATCC 33300]
gi|227244165|gb|EEI94180.1| DNA helicase RecG [Sphingobacterium spiritivorum ATCC 33300]
Length = 701
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 150/417 (35%), Positives = 218/417 (52%), Gaps = 68/417 (16%)
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKVRAMR---SNNHYEMREYNIDVLKDEDDLSLRAKG 380
F SIP+LK K+G + GK S H EM YN K + SL+
Sbjct: 99 FQSIPWLKK---SLKIGSPYILYGKPTEFNGHISITHPEMELYNAQEQKIGNQ-SLQ--- 151
Query: 381 RPYPIYPS-----KGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMG 434
P+Y S K L+ ++ AL+ + + D +P + QE L+ A +
Sbjct: 152 ---PVYSSTEKLKKFNLDTRGIQRLQQTALETVYRSIGDMLPPYLIQEHRLIDYPKALLA 208
Query: 435 IHQPKHIDEADLARKRLIFDEFFYLQL----GRLYQMLEGLGTQFEKEGLLDKYRKPRLN 490
IH PK E D A +RL F+E F++QL + L+ G +F++ G ++N
Sbjct: 209 IHFPKSQQELDQAIRRLKFEELFFIQLRLLNNKQLNTLKFKGHRFDQVG-------EKVN 261
Query: 491 AAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAF 550
+ E LP+ LT++Q I EI D MNRL+QGDVG GKTVVA
Sbjct: 262 TFFNE-----------KLPFPLTNAQKRVIKEIRQDTNTGAQMNRLVQGDVGSGKTVVAL 310
Query: 551 LACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRM 610
++ + I +G+QA M PTE+LATQHY + +LL + K+ LLTGSTP K+ R+
Sbjct: 311 MSMLLAIDNGFQACMMAPTEILATQHYASVSELL-----GEGFAKVRLLTGSTPAKERRI 365
Query: 611 IRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSG 670
I ++L+ G + ++IGTH+LI +KV F + ++DEQ RFGV QR +KL+ ++
Sbjct: 366 IHQELEEGTLDILIGTHALIEDKVRFKNIGFVVIDEQHRFGVEQR----AKLWRKNV--- 418
Query: 671 MAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PH+L M+ATPIPRTLA+ +YGD+ ++ I +LP GR PIKT
Sbjct: 419 ---------------IPPHMLVMTATPIPRTLAMTMYGDLDISVIDELPAGRKPIKT 460
>gi|429751935|ref|ZP_19284824.1| ATP-dependent DNA helicase RecG [Capnocytophaga sp. oral taxon 326
str. F0382]
gi|429178370|gb|EKY19649.1| ATP-dependent DNA helicase RecG [Capnocytophaga sp. oral taxon 326
str. F0382]
Length = 704
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 163/545 (29%), Positives = 259/545 (47%), Gaps = 107/545 (19%)
Query: 204 EPLLDKCISCVPGLSKRLYHQLEN-CGFYTLRKLLHHFPRTYAD---------LQNAQID 253
E +L IS + G+ + L+ G Y + LL+ FP Y D LQN +
Sbjct: 4 ENILHTSISHLRGVGTQRAELLKTELGIYEYQDLLNLFPNRYIDRTKFYKINELQNNNAE 63
Query: 254 LDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYL 313
+ +G+I++ R +++ S +V + +T T E+V
Sbjct: 64 VQ------LVGKIVNLRTVESAHQKS--NRLVATFVDETGTM---ELV------------ 100
Query: 314 HLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDD 373
+F+G LK + K+ E + GK+ + M +D+L +
Sbjct: 101 ----WFKG--------LKWLRDSLKINEPYVIFGKLNFFGGT--FSMPHPEMDLL---SE 143
Query: 374 LSLRAKGRPYPIYPS-----KGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLC 427
P+YPS K + ++R + + + NF + +P I L+
Sbjct: 144 FKKTGHSSIQPVYPSTEKLAKRNITNRVMRQLVQTVFEEIGYNFSENLPDTILTAMNLIS 203
Query: 428 LFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYR-- 485
+A IH P + A RL F+E FY+Q+ Q ++ LL K +
Sbjct: 204 KREAMRNIHFPTNQSLLTKASIRLKFEELFYIQV------------QLVRKNLLHKQKFQ 251
Query: 486 -KP--RLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVG 542
+P ++ A+M ++ LP+ LT++Q + EI D+ MNRLLQGDVG
Sbjct: 252 GQPFKKVGDAFMNFYN-------HHLPFPLTNAQKRVLKEIRADVGSNAQMNRLLQGDVG 304
Query: 543 CGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGS 602
GKT+VA + + + + QA M PTE+LA QHY+ + +LL N +ALLTGS
Sbjct: 305 SGKTIVALMTMLLAVDNHCQACLMAPTEILANQHYQTISELLKNT-----GVTVALLTGS 359
Query: 603 TPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKL 662
+ K+ R++ + LQ+G+++++IGTH+L+ EKV+F L LAI+DEQ RFGV QR + K
Sbjct: 360 SKTKERRILDEQLQSGELSILIGTHALLEEKVQFQNLGLAIIDEQHRFGVEQRAKLWRK- 418
Query: 663 YYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGR 722
+ PH+L M+ATPIPRTLA+++YGD+ ++ I +LPPGR
Sbjct: 419 ---------------------NTIPPHILVMTATPIPRTLAMSVYGDLDVSVIDELPPGR 457
Query: 723 IPIKT 727
PI+T
Sbjct: 458 KPIQT 462
>gi|302389602|ref|YP_003825423.1| ATP-dependent DNA helicase RecG [Thermosediminibacter oceani DSM
16646]
gi|302200230|gb|ADL07800.1| ATP-dependent DNA helicase RecG [Thermosediminibacter oceani DSM
16646]
Length = 674
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 172/523 (32%), Positives = 239/523 (45%), Gaps = 91/523 (17%)
Query: 225 LENCGFYTLRKLLHHFPRTYADLQ--NAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLE 282
L + G T+ LLH FPR Y DL N + DD +G +F +
Sbjct: 21 LRSLGINTVMDLLHFFPRRYLDLTPLNFEQGHDDS-----VG------------AFPCIV 63
Query: 283 VIVGCEIADTETTSGDEVVNI--DSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVG 340
G E+ T S +V I G++K F + P++K K G
Sbjct: 64 ADYGYEVL---TRSRMRIVKIPVTDGRRKG----------SAVFFNQPYMKD---AFKPG 107
Query: 341 EFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDT 400
+ + + GK+R ++ YE+ + D + R P+YP GL ++R
Sbjct: 108 DKLVLIGKIR--KNYGEYEILNPEWQKFEKTDYVDY---ARICPVYPLTKGLTQKIMRKI 162
Query: 401 IARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYL 459
I LQ P D V P+ + +E+ L+ A IH P+ ++ A++R F+E
Sbjct: 163 IKSVLQD-PLEVDEVLPQSVLKEYRLMPKASALRNIHFPESWEKLTKAQERFAFEELLLF 221
Query: 460 QLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSA 519
QL + +G E + Y+ L K L+ LP+SLT Q
Sbjct: 222 QLAMMITRRHLMG-----EKRKNTYKDFDL------------KPFLKNLPFSLTEGQKKV 264
Query: 520 ISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEH 579
I EII DLK MNRL+QGDVG GKTVVA +A + +GYQ AFMVPTE+L+ QH
Sbjct: 265 IKEIISDLKSDRIMNRLIQGDVGSGKTVVASIALYLAVKNGYQGAFMVPTEILSIQHGAT 324
Query: 580 LLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSAL 639
L K L + H K+ +L G P I DL+ G I +V+GTH+LI E V+F L
Sbjct: 325 LKKFL-----NPHGIKVEVLKGDMPKAVKEQILCDLEKGRIDVVVGTHALIQENVKFYRL 379
Query: 640 RLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIP 699
+ + DEQ RFGV QR K YY P VL MSATPIP
Sbjct: 380 GMVVTDEQHRFGVRQREALVKKGYY-----------------------PDVLVMSATPIP 416
Query: 700 RTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYK 742
RTLAL +Y D+ ++ I +P GR + TY++ +E VYK
Sbjct: 417 RTLALTIYSDLDISVIDTMPRGRQKVDTYVV--DESMRTRVYK 457
>gi|374308571|ref|YP_005055002.1| ATP-dependent DNA helicase RecG [Filifactor alocis ATCC 35896]
gi|291166899|gb|EFE28945.1| ATP-dependent DNA helicase RecG [Filifactor alocis ATCC 35896]
Length = 684
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 133/349 (38%), Positives = 178/349 (51%), Gaps = 44/349 (12%)
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHID 442
YPIYP GL+ + + + LQ+L + P+ + Q+ L A IH P +
Sbjct: 144 YPIYPLVKGLSNHDMVNAMRTILQSLGELEEVFPESLLQKRSLAPFDFAVRNIHFPHSVS 203
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
AR RLI+ EFF LQ+ LL+ K +++ K
Sbjct: 204 ALKSARYRLIYQEFFMLQMH-----------------LLNLRNKDETARSFVLKELEQAK 246
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
+P+ LT++Q + E+ DLKQ PM RL+QGDVG GKTV+A+ A +GYQ
Sbjct: 247 SFFDKIPFELTNAQKRVLQEMTEDLKQEKPMQRLVQGDVGSGKTVLAWYATYLTFLNGYQ 306
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
M PTE+LA QHYE KL + +IA L+GS K+ I + + GD L
Sbjct: 307 TVLMAPTEVLAKQHYEGAKKLFEG-----SGVRIAFLSGSISKKKKEEIYQGISDGDYDL 361
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
VIGTH++I E V FS L LAI DEQ RFGV QRG+ SK Y
Sbjct: 362 VIGTHAVIQEGVHFSKLALAITDEQHRFGVKQRGKL-SKQY------------------- 401
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
++PH+L M+ATPIPRTL L L GD+ ++ I +LP GR I+TY IE
Sbjct: 402 --EISPHILVMTATPIPRTLTLVLQGDLDISIIDELPKGRKQIETYAIE 448
>gi|168335018|ref|ZP_02693133.1| RecG-like helicase [Epulopiscium sp. 'N.t. morphotype B']
Length = 677
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 169/552 (30%), Positives = 258/552 (46%), Gaps = 111/552 (20%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYAD------LQNAQIDLDDGQY 259
+L + I+ + G+ ++ + G YT+ +L+ +FP+ + D ++ A +D +
Sbjct: 1 MLKESITTLSGMGEQTAKRFYRLGIYTIAELMEYFPKKHEDRSKVTPIEAAVLDEANN-- 58
Query: 260 FIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFF 319
+ +I +K + V+V E++D G E + I
Sbjct: 59 --IVATVIKEPILKKVNN----RVMVSFEVSD-----GTEQMTI---------------- 91
Query: 320 RGTRFTSIPFLKSIEGKHKVGEFVCVSGKVR------AMRSNNHYEMREYNIDVLKDEDD 373
F P++K+ VG G V+ M S ++ + +Y
Sbjct: 92 ---IFFEQPYMKN---NFHVGLIYNFYGTVKLKYNKLNMVSPSYQTLEKYT--------- 136
Query: 374 LSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAY 432
+ + P+Y S L+ ++R I A+ N D +P +I + L+ A
Sbjct: 137 ----QQTKLIPVYASTYQLSQFIIRKHIKNAIDIAICNVSDVIPTDIVAKHNLMPKRQAI 192
Query: 433 MGIHQPKHIDEADL--ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLN 490
IH PK D+A AR+RL+F+E F LQL L L + F ++ + P
Sbjct: 193 ENIHFPK--DDASFVEARRRLVFEELFLLQLS-----LYILKSDFRQKQAGTVKQSPVDL 245
Query: 491 AAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAF 550
A++E LP+ LT++Q + E+ DLK NRL+QGDVG GKTVVA
Sbjct: 246 EAFVE-----------TLPFKLTAAQQRVVKEVAADLKLLGAANRLIQGDVGSGKTVVAA 294
Query: 551 LACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRM 610
+A V+ +G+Q+ M PTE+LA QH+E L K + + +ALLTGST KQ
Sbjct: 295 IALFIVVRNGFQSTLMAPTEVLARQHFEFLEKTFEAFD-----ISVALLTGSTTKKQKMG 349
Query: 611 IRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSG 670
+ + L GDI +++GTH+LI + V ++ L L I DEQ RFGV QR K +
Sbjct: 350 LLEKLAKGDIDILVGTHALIEDNVVYAKLGLVITDEQHRFGVRQRLSLAQKGDF------ 403
Query: 671 MAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
P VLAM+ATPIPRTLAL LYGDM ++ I +LPPGR PIKT +
Sbjct: 404 -----------------PDVLAMTATPIPRTLALILYGDMDISTIDELPPGRTPIKTNAV 446
Query: 731 EGNEKGYENVYK 742
+ + Y +YK
Sbjct: 447 DS--RYYARIYK 456
>gi|418110664|ref|ZP_12747683.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA49447]
gi|419423658|ref|ZP_13963871.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA43264]
gi|353781285|gb|EHD61730.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA49447]
gi|379586230|gb|EHZ51084.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA43264]
Length = 671
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 163/531 (30%), Positives = 256/531 (48%), Gaps = 97/531 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMFRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ QML+ + + GL+ + + ++ A +
Sbjct: 197 LAEYKQALRRIKFEELFYFQMQ--LQMLKS-ENRVQGSGLVLNWSQEKVTAVKV------ 247
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
+LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +G
Sbjct: 248 ------SLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTAG 301
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+
Sbjct: 302 YQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGEA 354
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 355 DLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN-- 398
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 -------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|343127882|ref|YP_004777813.1| ATP-dependent DNA helicase RecG [Borrelia bissettii DN127]
gi|342222570|gb|AEL18748.1| ATP-dependent DNA helicase RecG [Borrelia bissettii DN127]
Length = 686
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 161/533 (30%), Positives = 253/533 (47%), Gaps = 82/533 (15%)
Query: 214 VPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMK 273
+ GL ++ +L N + ++ L+ FP Y D QN Q
Sbjct: 13 ISGLGEKGVERLNNLQIFNVKDLIEFFPVKYEDRQNMQ---------------------- 50
Query: 274 AGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKS- 332
+F + C++ T G + KK + L + T F + F ++
Sbjct: 51 ---TFPDFSKVKSCDMMTVFTVVGHK--KFGDSSKKNLKLTARSVNDET-FEILLFNRAF 104
Query: 333 IEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGL 392
+E K+ + + K + + ++ +V D+ + R K + +P+Y GL
Sbjct: 105 LENVFKIDKKFYIYSKFTYNDYSGLWSCSNFDSEVYSDKPE---RFK-KIFPVYSLTEGL 160
Query: 393 NASLLRDTIARALQA-LPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRL 451
+ + + AL+ L +PK + +++ LL L DA IH P ++ + A+K L
Sbjct: 161 TSKKISLYVREALEYFLKFGQTDIPKFLIEKYSLLSLSDALKEIHFPSSLEMLERAKKTL 220
Query: 452 IFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYS 511
I+ E F LQ Y+ + L +R+ R N + L ++++ +LP+
Sbjct: 221 IYREIFLLQFFSRYRSSKVL------------FREKR-NLS-----KDLLERVVSSLPFE 262
Query: 512 LTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTEL 571
LT Q ++ EI +DL PMNRLLQGDVG GKT+VA L+ + +I +GYQ AFM PT+L
Sbjct: 263 LTEDQKISVDEIFFDLNSSKPMNRLLQGDVGSGKTLVALLSGLPLIEAGYQVAFMAPTDL 322
Query: 572 LATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIA 631
LA QHY++L +L + + LLTGS K ++++ G L++GTH++
Sbjct: 323 LARQHYDNLSNILSSF-----NISVTLLTGSLKKKDKEQALENIRNGTSDLIVGTHAIFY 377
Query: 632 EKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVL 691
E EF L I+DEQ +FGVVQR +K G+ M L
Sbjct: 378 ESTEFKRLAYVIIDEQHKFGVVQREELKNK------GEGVDM-----------------L 414
Query: 692 AMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE-GNE-KGYENVYK 742
MSATPIPR+ AL L+GD+ ++ I LP GR+PI TY+ + GNE K YE + K
Sbjct: 415 LMSATPIPRSFALTLFGDLEISFIKTLPEGRLPITTYLAKHGNEDKVYEFLRK 467
>gi|253575788|ref|ZP_04853123.1| ATP-dependent DNA helicase RecG [Paenibacillus sp. oral taxon 786
str. D14]
gi|251844831|gb|EES72844.1| ATP-dependent DNA helicase RecG [Paenibacillus sp. oral taxon 786
str. D14]
Length = 683
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 133/382 (34%), Positives = 198/382 (51%), Gaps = 57/382 (14%)
Query: 358 YEMREYNIDVLKDE--DDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPV 415
++MR + V + E D +LR+ G P+Y G + +R TI +ALQ +
Sbjct: 118 WDMRRSQLTVSESEFPDRGTLRS-GSLQPVYSVGGKITQQWMRKTIGQALQQYGEMIPEI 176
Query: 416 -PKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQ 474
P E+ +++GL+ A + +HQP+ +E AR+R++++E F QL
Sbjct: 177 LPPELLRKYGLMPRKTAILRLHQPQDSEEGQQARRRMVYEELFLFQLK------------ 224
Query: 475 FEKEGLLDKYRKPRLNAAYMEGWSSLT-----KKLLRALPYSLTSSQLSAISEIIWDLKQ 529
L YR +N M+G + + ++ +R+LP+ LT +Q EI+ D++
Sbjct: 225 ------LQAYRA--MNHERMDGVAHVVDNATIREFVRSLPFELTDAQKKVELEILKDMRS 276
Query: 530 PVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEE 589
P MNRLLQGDVG GKTV+A +A + SG+Q FMVPTE+LA QH L +L +
Sbjct: 277 PYCMNRLLQGDVGSGKTVIAAIALYAAVKSGHQGTFMVPTEILAEQHMRSLSRLFEPF-- 334
Query: 590 DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQR 649
+ LLTGS ++ + + LQ G +V+GTH+LI E V F +L L I DEQ R
Sbjct: 335 ---GITVGLLTGSVTGRKRKDLLGSLQMGLTDIVVGTHALIQEDVFFRSLSLVITDEQHR 391
Query: 650 FGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGD 709
FGV QR K + P VL M+ATPIPRTLA+ +GD
Sbjct: 392 FGVNQRSILRRKGF-----------------------NPDVLTMTATPIPRTLAITAFGD 428
Query: 710 MSLTQITDLPPGRIPIKTYIIE 731
M ++ +++ P GR PI TY ++
Sbjct: 429 MDVSTLSERPKGRKPITTYWVK 450
>gi|352518405|ref|YP_004887722.1| ATP-dependent DNA helicase RecG [Tetragenococcus halophilus NBRC
12172]
gi|348602512|dbj|BAK95558.1| ATP-dependent DNA helicase RecG [Tetragenococcus halophilus NBRC
12172]
Length = 676
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 165/533 (30%), Positives = 253/533 (47%), Gaps = 97/533 (18%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIG 264
+L + I+ + G+ ++ L + G T+ LL+++P Y D++ + +++D + G
Sbjct: 1 MLQEPITKLSGVGEKRAQALADLGIETIENLLNYYPFRYDDIKERNLAEINDQEKVTIKG 60
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFR--GT 322
++S VVN +K ++ + +
Sbjct: 61 VVVSP-----------------------------PVVNRFGYKKSRLQFRMMQDHDVFSV 91
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+LK K + E + V GK R + L L + +G
Sbjct: 92 SFFNQPYLKD---KIVLSEDIAVFGKWDGKRKS------------LTGMKILGAKQEGDF 136
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHI 441
PIY + L D I +A + +P + +++ L+ +A +H P
Sbjct: 137 APIYHVSKAVRQQTLVDLIKKAFVHFGDQIEENLPLSLIEKYRLMEKKEAMYAMHFPNTP 196
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQM-LEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWS 498
+E A++R++F+EFF L+QM ++GL + EK G++ Y R+ A
Sbjct: 197 EEHHQAKRRVVFEEFF------LFQMKIQGLKKEEKSEKHGIVIDYDVERVKA------- 243
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
T+KL P+SLT++Q +EI D Q M RLLQGDVG GKTVVA +A +
Sbjct: 244 -FTQKL----PFSLTNAQKRVTNEICRDFLQAKHMQRLLQGDVGSGKTVVAAIALYAAVT 298
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+G+Q A MVPTE+LA QH L +L D +E ALLT ST K+ + I + LQ G
Sbjct: 299 AGFQGALMVPTEILAQQHLASLNQLFDPLE-----IHTALLTSSTKAKERQEIIEKLQQG 353
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+I +V+GTHSLI E V+FS L L I DEQ RFGV QR K +
Sbjct: 354 EIDVVVGTHSLIQEGVDFSNLGLVITDEQHRFGVNQRRGLREKGF--------------- 398
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ YG+M ++ I ++P GR+P+KT+ I+
Sbjct: 399 --------QPDVLFMTATPIPRTLAITAYGEMDVSVIDEMPAGRLPVKTHWIK 443
>gi|300771630|ref|ZP_07081505.1| DNA helicase RecG [Sphingobacterium spiritivorum ATCC 33861]
gi|300761619|gb|EFK58440.1| DNA helicase RecG [Sphingobacterium spiritivorum ATCC 33861]
Length = 701
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 150/417 (35%), Positives = 218/417 (52%), Gaps = 68/417 (16%)
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKVRAMR---SNNHYEMREYNIDVLKDEDDLSLRAKG 380
F SIP+LK K+G + GK S H EM YN K + SL+
Sbjct: 99 FQSIPWLKK---SLKIGSPYILYGKPTEFNGHISITHPEMELYNAQEQKIGNQ-SLQ--- 151
Query: 381 RPYPIYPS-----KGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMG 434
P+Y S K L+ ++ AL+ + + D +P + QE L+ A +
Sbjct: 152 ---PVYSSTEKLKKFNLDTRGIQRLQQTALETVYRSIGDMLPVYLIQEHRLIEYPKALLA 208
Query: 435 IHQPKHIDEADLARKRLIFDEFFYLQL----GRLYQMLEGLGTQFEKEGLLDKYRKPRLN 490
IH PK E D A +RL F+E F++QL + L+ G +F++ G ++N
Sbjct: 209 IHFPKSQQELDQAIRRLKFEELFFIQLRLLNNKQLNTLKFKGHRFDQVG-------EKVN 261
Query: 491 AAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAF 550
+ E LP+ LT++Q I EI D MNRL+QGDVG GKTVVA
Sbjct: 262 TFFNE-----------KLPFPLTNAQKRVIKEIRQDTNTGAQMNRLVQGDVGSGKTVVAL 310
Query: 551 LACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRM 610
++ + I +G+QA M PTE+LATQHY + +LL + K+ LLTGSTP K+ R+
Sbjct: 311 MSMLLAIDNGFQACMMAPTEILATQHYASVSELL-----GEGFAKVRLLTGSTPAKERRI 365
Query: 611 IRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSG 670
I ++L+ G + ++IGTH+LI +KV F + ++DEQ RFGV QR +KL+ ++
Sbjct: 366 IHQELEEGTLDILIGTHALIEDKVRFKNIGFVVIDEQHRFGVEQR----AKLWRKNV--- 418
Query: 671 MAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PH+L M+ATPIPRTLA+ +YGD+ ++ I +LP GR PIKT
Sbjct: 419 ---------------IPPHMLVMTATPIPRTLAMTMYGDLDISVIDELPAGRKPIKT 460
>gi|145350405|ref|XP_001419597.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579829|gb|ABO97890.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 539
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/323 (41%), Positives = 190/323 (58%), Gaps = 42/323 (13%)
Query: 422 EFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQM--LEGLGTQFEKEG 479
E GLL +A IH+P++++ AR+RL F+E LQ+ L + L+ L EG
Sbjct: 10 ELGLLSHSEAVKNIHRPRNVEAVAQARERLAFEELVLLQVALLQERSRLQALPVSESTEG 69
Query: 480 LLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQG 539
+ ++LT +L LP++LT SQ S++ EI+ D+ P PM RLLQG
Sbjct: 70 VCIV-------------GTALTDELRSELPFALTRSQESSLEEILSDMAGPAPMLRLLQG 116
Query: 540 DVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALL 599
DVGCGKTVVA +A + +G+G+Q AFM PTE+LATQH+ L LL M + PK+ALL
Sbjct: 117 DVGCGKTVVAAMALLAAVGAGHQGAFMAPTEVLATQHHRVLTDLLSQM---RDPPKVALL 173
Query: 600 TGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFN 659
TGST + I +DL G I +++GTH+LI EKV FS+L +A+VDEQ RFGV QR
Sbjct: 174 TGSTKTAERAQILEDLNDGKIGIIVGTHALIHEKVVFSSLGIAVVDEQHRFGVEQRAGLL 233
Query: 660 SKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLP 719
+K + PH+L MSATPIPRTLA+ +G+M+L+ I + P
Sbjct: 234 AK----------------------GKLPPHMLTMSATPIPRTLAMTKFGEMALSVIDEKP 271
Query: 720 PGRIPIKTYI--IEGNEKGYENV 740
GR+PI T + ++ + + Y+++
Sbjct: 272 AGRLPIITTVCGVDEHSQAYDSM 294
>gi|385825629|ref|YP_005861971.1| ATP-dependent DNA helicase RecG [Lactobacillus johnsonii DPC 6026]
gi|329667073|gb|AEB93021.1| ATP-dependent DNA helicase RecG [Lactobacillus johnsonii DPC 6026]
Length = 679
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 168/524 (32%), Positives = 252/524 (48%), Gaps = 101/524 (19%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGEIIS- 268
++ + G+ + L + G T+ LL +FP Y DL+ +D ++DGQ + G +++
Sbjct: 12 VTELKGVGAKTATALASLGINTIYDLLFYFPFRYDDLETIPLDQIEDGQKVLLKGMVVTD 71
Query: 269 ---SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFT 325
SR SF ++ + +I +VN F
Sbjct: 72 PFVSRFGYRKTRLSF-KMKIDHDII---------MVN---------------------FF 100
Query: 326 SIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPI 385
+ P+LK K + G+ V V GK + R + + + + K + + PI
Sbjct: 101 NQPWLKD---KVESGKEVAVYGKYQVARQS----LSGFKLVAEKKDSGFA--------PI 145
Query: 386 YPSKGGLNASLLRDTIARALQ-ALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
Y L + L+ I AL+ A+ + +P I +++ LL +H PK+ +EA
Sbjct: 146 YSVNRHLKQNKLQKLIDLALEEAINEVGETIPASIREKYRLLSDRVLVEKMHHPKNDNEA 205
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
+AR+ IF EFF Q+ +L Q+L + G+ KY + K+L
Sbjct: 206 KIARRSAIFREFFLFQM-QLAQLLSQRNE--DAPGVEKKYD------------LAAVKEL 250
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
+ +P+ L+ Q ++EI DL M RLLQGDVG GKTVVA A + +GYQAA
Sbjct: 251 IEEIPFELSDDQKKVVNEIFADLHSKRQMRRLLQGDVGSGKTVVAVFAIYAAVTAGYQAA 310
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKP---KIALLTGSTPVKQSRMIRKDLQTGDIT 621
MVPTE+LA QH+ + +LL KP ++ALLTG T + + I ++L G I
Sbjct: 311 LMVPTEILAQQHFAKIDELL--------KPLGVRVALLTGDTKDLEKKEIYRELADGTIN 362
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+VIGTH+LI + V F L L I+DEQ RFGV QR T + G
Sbjct: 363 VVIGTHALIQKDVHFKNLGLVIIDEQHRFGVNQRN--------TLIKKG----------- 403
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
AP +LAM+ATPIPRTLAL +YGDM++++I LP GR P+
Sbjct: 404 ----DAPDILAMTATPIPRTLALTVYGDMAVSEIRHLPKGRKPV 443
>gi|183981755|ref|YP_001850046.1| ATP-dependent DNA helicase RecG [Mycobacterium marinum M]
gi|183175081|gb|ACC40191.1| ATP-dependent DNA helicase RecG [Mycobacterium marinum M]
Length = 743
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 159/525 (30%), Positives = 250/525 (47%), Gaps = 74/525 (14%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNAQIDLDD-----GQYFIFIGEIISSRG--MKAGCSF 278
E G T+ LL H+PR+Y + A+ DD G++ + I ++ MK
Sbjct: 22 EEFGIRTVDDLLRHYPRSYVE-GGARRGTDDEQPEVGEHITIVDVITETKSFPMKKTPRR 80
Query: 279 SFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK---FFRGTRFTSIP---FLKS 332
L + +G + T + I G K + L +F+G + P L S
Sbjct: 81 LCLRITLGSG-RNKVTATFFNADYIKKGLTKNTRVMLSGEVGYFKGVMQLTHPAFLILDS 139
Query: 333 IEGKHK-VGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGG 391
+G+H ++ +A+ + M E+ + R +PIYP+
Sbjct: 140 PDGQHHGTKSLKSIADASQAI--SGELAMEEF---------------ERRFFPIYPASTK 182
Query: 392 LNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRL 451
+ + + + + L+ L DP+P + E GL+ DA IH + E + AR+RL
Sbjct: 183 VQSWDIFKCVRQVLEVLDPVDDPLPAALRAEHGLISEDDALRAIHLAEDESEREQARRRL 242
Query: 452 IFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYS 511
FDE LQ + + + G L + P A +G L +LL LP+
Sbjct: 243 TFDEAVGLQWALVAR----------RHGELSESGPP--APARADG---LAAELLARLPFE 287
Query: 512 LTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTEL 571
LT+ Q + E+ L PMNRLLQG+VG GKT+VA LA ++++ +GYQ A + PTE+
Sbjct: 288 LTAGQREVLDELSDGLAATRPMNRLLQGEVGSGKTIVAVLAMLQMVDAGYQCALLAPTEV 347
Query: 572 LATQHYEHL------LKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIG 625
LA QH + L + + + ++ALLTGS Q + +R ++ +G + +VIG
Sbjct: 348 LAAQHLLSINDVLGPLAMGGQLGGADNATRVALLTGSMTAGQKKQVRAEIASGQVGIVIG 407
Query: 626 THSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQH 685
TH+L+ + VEF L + +VDEQ RFGV QR + +K +P
Sbjct: 408 THALLQDAVEFHNLGMVVVDEQHRFGVEQRDQLRAK-----------------APAG--- 447
Query: 686 MAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+ PH+L M+ATPIPRT+AL +YGD+ + + +LP GR PI T +I
Sbjct: 448 ITPHLLVMTATPIPRTVALTVYGDLETSTLRELPRGRQPITTNVI 492
>gi|238916890|ref|YP_002930407.1| ATP-dependent DNA helicase RecG [Eubacterium eligens ATCC 27750]
gi|238872250|gb|ACR71960.1| ATP-dependent DNA helicase RecG [Eubacterium eligens ATCC 27750]
Length = 685
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/355 (36%), Positives = 184/355 (51%), Gaps = 44/355 (12%)
Query: 379 KGRPYPIYPSKGGLNASLLRDTIARALQALPANFDP--VPKEITQEFGLLCLFDAYMGIH 436
+G PIYP GL + + +A+AL+ A + +P I + + L + + IH
Sbjct: 139 QGTLQPIYPLTKGLTNNTVTKAVAQALEKYSAGLEKEYIPDYIRKRYSLAEHNFSIVNIH 198
Query: 437 QPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG 496
PK ++E AR RL F+EFF L L + E + + Y P
Sbjct: 199 FPKTMEEYVQARHRLAFEEFFLFTLATL-------SLKSANEHIPNSYVIPE-------- 243
Query: 497 WSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEV 556
S + L +L YSLT++QL +SE+ D+ +RL+QGDVG GKTVVA +A +
Sbjct: 244 -SKEKDQFLESLSYSLTNAQLRTVSEVAQDMSGEHLCSRLIQGDVGSGKTVVATIALINT 302
Query: 557 IGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQ 616
+ +GYQ A M PTE+LA QHYE +K + D ++ LL GS KQ + +
Sbjct: 303 VIAGYQGALMAPTEVLARQHYESFVKGFEKAGLD---IRVELLVGSMTAKQKKEAYARIA 359
Query: 617 TGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNS 676
G +++GTH+LI EKVE+ L L I DEQ RFGV QR F+ K
Sbjct: 360 DGTAGIIVGTHALIQEKVEYKELALVITDEQHRFGVNQRRDFSQK--------------- 404
Query: 677 DGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
+PH+L MSATPIPRTLA+ LYGD+ ++ I ++P R+PIK +++
Sbjct: 405 --------GKSPHILVMSATPIPRTLAIILYGDLDISIIDEMPANRLPIKNCVVD 451
>gi|386821685|ref|ZP_10108901.1| ATP-dependent DNA helicase RecG [Joostella marina DSM 19592]
gi|386426791|gb|EIJ40621.1| ATP-dependent DNA helicase RecG [Joostella marina DSM 19592]
Length = 700
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 163/519 (31%), Positives = 248/519 (47%), Gaps = 107/519 (20%)
Query: 228 CGFYTLRKLLHHFPRTYAD------LQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFL 281
G +T + L++ FP Y D + Q + D Q IG+I S + ++ +
Sbjct: 28 LGVHTYQDLINLFPNRYIDKTRYYKINELQRNNADVQ---VIGKITSLKTVEQKRGKRLV 84
Query: 282 EVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGE 341
V D+GQ + ++ FRG ++ I K+ +
Sbjct: 85 ATFVD-----------------DTGQMELVW------FRGHKW--------IRESIKINQ 113
Query: 342 FVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGL-NASLLRDT 400
+ GK N + M +++L +E + SLR +P +YPS L N +
Sbjct: 114 PYVIFGKTNWF---NGFSMPHPEMELL-EEHEKSLRTAMQP--VYPSTEKLTNKGITNKV 167
Query: 401 IARALQALPAN-----FDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDE 455
I + +Q L FD + E+ E L+ A IH P+ + A+ RL F+E
Sbjct: 168 INKIMQQLFVETKARFFDTLSAELLDELKLISKSKALFNIHFPQSQELLAKAQYRLKFEE 227
Query: 456 FFYLQLGRLYQML----EGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYS 511
FY+QL + + L + G F++ G L N Y E LP+
Sbjct: 228 LFYIQLQLISKNLTRKNKIKGFNFDQVGTL-------FNTFYAE-----------HLPFK 269
Query: 512 LTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTEL 571
LT++Q I EI DL MNRLLQGDVG GKT+VA ++ + I +G+QA + PTE+
Sbjct: 270 LTNAQKRVIKEIRNDLGSNAQMNRLLQGDVGSGKTIVALMSMLLAIDNGFQACLVAPTEI 329
Query: 572 LATQHYEHLLKLLDNMEEDKHKP---KIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHS 628
L+ QHY +L+L+ KP K+ LLTGS+ + + I + L+ G++ ++IGTH+
Sbjct: 330 LSQQHYNGILELV--------KPLNIKVKLLTGSSKSSERKEIHEALENGELQILIGTHA 381
Query: 629 LIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAP 688
++ +KV F L LAI+DEQ RFGV QR + K ++ P
Sbjct: 382 ILEDKVLFKNLGLAIIDEQHRFGVAQRAKLWRK----------------------NNIPP 419
Query: 689 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
H+L M+ATPIPRTLA++LYGD+ ++ I +LPPGR IKT
Sbjct: 420 HILVMTATPIPRTLAMSLYGDLDISVIDELPPGRKAIKT 458
>gi|224535823|ref|ZP_03676362.1| hypothetical protein BACCELL_00687 [Bacteroides cellulosilyticus
DSM 14838]
gi|423226158|ref|ZP_17212624.1| ATP-dependent DNA helicase RecG [Bacteroides cellulosilyticus
CL02T12C19]
gi|224522546|gb|EEF91651.1| hypothetical protein BACCELL_00687 [Bacteroides cellulosilyticus
DSM 14838]
gi|392630269|gb|EIY24263.1| ATP-dependent DNA helicase RecG [Bacteroides cellulosilyticus
CL02T12C19]
Length = 698
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 169/515 (32%), Positives = 252/515 (48%), Gaps = 95/515 (18%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIV 285
+ Y+L LL++FP Y D +I EI + ++++
Sbjct: 25 KELNIYSLHDLLYYFPYKYVDRSR----------IYYIHEI--------DGTMPYIQL-- 64
Query: 286 GCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIE---GKHKVGEF 342
EI ET I G+++++ H F GT + + + I+ GK+KV +
Sbjct: 65 KGEILGFET--------IGEGRQRRLIAH---FSDGTGIVDLVWFQGIKFLVGKYKVHQE 113
Query: 343 VCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG-RPYPIYPSK---GGLNASLLR 398
V GK N + +ID + +L L G +PY K LN+ +
Sbjct: 114 YIVFGKPSVF--NGRINIAHPDID---NASELKLSTMGLQPYYNTTEKMKRSSLNSHAIE 168
Query: 399 DTIARALQALPANFDPVPKE----ITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFD 454
++ +Q L +P+P+ I E L+ L +A M IH P + + A+ RL F+
Sbjct: 169 KMMSAVVQQLR---EPLPETLSPAILTEHHLMPLTEALMNIHFPANPELLRKAQYRLKFE 225
Query: 455 EFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPR--LNAAYMEGWSSLTKKLLRALPYSL 512
E FY+QL L ++ K D+ RK R + E +++ K LP+ L
Sbjct: 226 ELFYVQLNIL---------RYAK----DRQRKYRGYVFETVGEIFNTFYAK---NLPFEL 269
Query: 513 TSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELL 572
T +Q + EI D+ MNRLLQGDVG GKT+VA ++ + + +GYQA M PTE+L
Sbjct: 270 TGAQKRVLKEIRRDVGSGKQMNRLLQGDVGSGKTLVALMSMLIALDNGYQACMMAPTEIL 329
Query: 573 ATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAE 632
A QH+E + +LL M+ ++ LLTGS K+ I L TGD+ ++IGTH++I +
Sbjct: 330 ANQHFETIRELLYGMD-----IRVELLTGSVKGKKREAILTGLLTGDVRILIGTHAVIED 384
Query: 633 KVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLA 692
V FS+L L ++DEQ RFGV QR R +K + P PHVL
Sbjct: 385 TVNFSSLGLVVIDEQHRFGVAQRARLWTK---------------NAQP-------PHVLV 422
Query: 693 MSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
M+ATPIPRTLA+ LYGD+ ++ I +LPPGR PI T
Sbjct: 423 MTATPIPRTLAMTLYGDLDVSVIDELPPGRKPIVT 457
>gi|399524960|ref|ZP_10765446.1| putative ATP-dependent DNA helicase RecG [Atopobium sp. ICM58]
gi|398373660|gb|EJN51554.1| putative ATP-dependent DNA helicase RecG [Atopobium sp. ICM58]
Length = 715
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 159/524 (30%), Positives = 236/524 (45%), Gaps = 69/524 (13%)
Query: 217 LSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGC 276
L KR LE +T+ LL PR Y G + ++ G
Sbjct: 15 LPKRTAKALEGASIFTVGDLLLVAPRRY----------------YHWGRLTPLSSLREGE 58
Query: 277 SFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGK 336
+ L + G + + SG V ++ + FF ++F P IE
Sbjct: 59 DATILAEVAGTHLVANRSGSG---VRLEVSLTDGVQFLSATFFAKSQFKLAP----IERL 111
Query: 337 HKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASL 396
G +GKV A R ++ + + + ED +R RP PIYP+ G L +
Sbjct: 112 LTPGASFLFAGKVGAYRGK--LQLTHPSFEGVDGED--IVRIATRPIPIYPATGKLTSWA 167
Query: 397 LRDTIARALQAL-PANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFD 454
+ + L+ L A+ D VP ++ + + +HQP+ ++ AR+ L F
Sbjct: 168 IARAVGMVLEHLDEADVPDVVPADVRGRQRIDSYAQSLRRLHQPETDEDYQRARRALAFT 227
Query: 455 EFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSS-LTKKLLRALPYSLT 513
E F LQ+G L + R R A + L ++ RALP+ LT
Sbjct: 228 EAFVLQVG-----------------LAARRRGARSTPALASPREAPLLERFQRALPFELT 270
Query: 514 SSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLA 573
SQ A+++I DL VPM RLLQGDVG GKTVVA LA ++VI +G+Q A + PTE+LA
Sbjct: 271 HSQSEAVAQIGADLAGEVPMQRLLQGDVGSGKTVVALLALLQVIAAGHQGALVAPTEVLA 330
Query: 574 TQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEK 633
QH + LL + +D P + LLTGST R I + + +V+GTH+L +
Sbjct: 331 EQHAASVRNLLAPLGDD--TPDVRLLTGSTTPAVRREIAAAMTSNAPLIVVGTHALFQDS 388
Query: 634 VEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAM 693
V F+ L L +VDEQ RFGV QR DG H L M
Sbjct: 389 VRFADLALVVVDEQHRFGVEQRAALRD-------------ARQDGR-------GVHELVM 428
Query: 694 SATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGY 737
+ATPIPRT+A+ ++GD+ T++ +P GR P+ T++ + +
Sbjct: 429 TATPIPRTIAMTVFGDLDETRMAGMPKGRTPVATFLADAANAAW 472
>gi|310642729|ref|YP_003947487.1| ATP-dependent DNA helicase recg [Paenibacillus polymyxa SC2]
gi|386041809|ref|YP_005960763.1| ATP-dependent DNA helicase RecG [Paenibacillus polymyxa M1]
gi|309247679|gb|ADO57246.1| ATP-dependent DNA helicase RecG [Paenibacillus polymyxa SC2]
gi|343097847|emb|CCC86056.1| ATP-dependent DNA helicase RecG [Paenibacillus polymyxa M1]
Length = 682
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 134/394 (34%), Positives = 195/394 (49%), Gaps = 54/394 (13%)
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDE-DDLSLRAKGRPYPIYPSKGGLNASLLR 398
G + V+GK ++++ + V E D + G P+Y G + S +R
Sbjct: 108 GREIVVTGK---------WDLKRMQMTVADSEFPDKGVARSGTIQPVYSIGGKITQSWMR 158
Query: 399 DTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFF 457
T+ + LQ + +P + +++ ++ A GIHQP+ E AR+R++++E F
Sbjct: 159 KTMNQTLQQFGEMIPEILPDLLVRKYSMMPRKQAIAGIHQPQDNREGQEARRRMVYEELF 218
Query: 458 YLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQL 517
QL K + R + ++ ++ +RALP+ LT +Q
Sbjct: 219 LFQL---------------KMQAFRALNRGRADGVVHTVDNATIREFVRALPFELTDAQK 263
Query: 518 SAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHY 577
EI+ DL+ P MNRLLQGDVG GKTVVA + + SG+Q A MVPTE+LA QH
Sbjct: 264 KVELEILHDLRSPYCMNRLLQGDVGSGKTVVAAIGLFATVRSGFQGALMVPTEILAEQHM 323
Query: 578 EHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFS 637
L KL + + LLTGST K+ + + LQ G + +V+GTH+LI E V F
Sbjct: 324 RSLHKLFEPF-----GISVGLLTGSTTGKKRKELLAALQMGLLDIVVGTHALIQEDVYFR 378
Query: 638 ALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATP 697
L L + DEQ RFGV QR K Y P VL M+ATP
Sbjct: 379 QLGLVVTDEQHRFGVNQRSVLRRKGY-----------------------NPDVLTMTATP 415
Query: 698 IPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
IPRTLA+ +GDM ++ I++ P GRIPI TY ++
Sbjct: 416 IPRTLAITAFGDMDVSTISERPKGRIPISTYWVK 449
>gi|302670822|ref|YP_003830782.1| ATP-dependent DNA helicase RecG1 [Butyrivibrio proteoclasticus
B316]
gi|302395295|gb|ADL34200.1| ATP-dependent DNA helicase RecG1 [Butyrivibrio proteoclasticus
B316]
Length = 689
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 168/536 (31%), Positives = 240/536 (44%), Gaps = 100/536 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTY---------ADLQNAQIDLDDG 257
LD+ + + G+ ++ E CG T+ LL ++PR Y +D++ QI+
Sbjct: 6 LDENVINLKGIGEKTAKLFEKCGVRTVGDLLSYYPRCYDGYEIPVRASDVRPGQIN---S 62
Query: 258 QYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK 317
IG II R I+ E AD +G+ K Y +
Sbjct: 63 VKLTIIGSIIKRRVRNLS--------IIAFEAAD------------QTGKIKMTYFN--- 99
Query: 318 FFRGTRFTSIPFLKSI---EGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDL 374
P+L S H V G M Y EY V
Sbjct: 100 ---------APYLASSLKSGTTHIFRGMVQKKGSFYTMDQPKMYSQEEYASLV------- 143
Query: 375 SLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMG 434
GR P YP GL +++ + +A + + VP+ I L+ +A
Sbjct: 144 -----GRLMPRYPLVKGLTNNIVIKAVEQAFLNIGKLEEFVPQTILDRLSLIGYSEAARS 198
Query: 435 IHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYM 494
IH P++ + + AR+RL +DEF L + TQ E ++ ++
Sbjct: 199 IHFPENDKKLEEARRRLAYDEFLLFVLKLRLLKM----TQEE------------ISNSFP 242
Query: 495 EGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACM 554
S TK+LL LPY LT++Q A +I DL+ P MNRL+QGDVG GKTV+A LA +
Sbjct: 243 MVEVSETKRLLEVLPYKLTNAQSLAWKDIQNDLQGPSVMNRLIQGDVGSGKTVIAMLALL 302
Query: 555 EVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKD 614
+GYQ A M PTE+LA QH+E+ +L+D KP LLTG+ K + ++
Sbjct: 303 TTAANGYQGALMAPTEVLAAQHFENFKELIDKYNIQHLKP--ILLTGALSAKDKKEAQRL 360
Query: 615 LQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMV 674
+ G+ +IGT++LI EKV + L L + DEQ RFGV QR K T
Sbjct: 361 ISEGEANCIIGTNALIQEKVSYKNLALVVTDEQHRFGVRQREALAGKGLNT--------- 411
Query: 675 NSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
HVLAMSATPIPRTLA+ LYGD+ ++ I +LP GR+PIK ++
Sbjct: 412 --------------HVLAMSATPIPRTLAIILYGDLHISVINELPGGRLPIKNCVV 453
>gi|189463789|ref|ZP_03012574.1| hypothetical protein BACINT_00122 [Bacteroides intestinalis DSM
17393]
gi|189438739|gb|EDV07724.1| ATP-dependent DNA helicase RecG [Bacteroides intestinalis DSM
17393]
Length = 698
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 169/515 (32%), Positives = 252/515 (48%), Gaps = 95/515 (18%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIV 285
+ Y+L LL++FP Y D +I EI + ++++
Sbjct: 25 KELNIYSLHDLLYYFPYKYVDRSR----------IYYIHEI--------DGTMPYIQL-- 64
Query: 286 GCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIE---GKHKVGEF 342
EI ET I G+++++ H F GT + + + I+ GK+KV +
Sbjct: 65 KGEILGFET--------IGEGRQRRLIAH---FSDGTGIVDLVWFQGIKFLVGKYKVHQE 113
Query: 343 VCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG-RPYPIYPSK---GGLNASLLR 398
V GK N + +ID + +L L G +PY K LN+ +
Sbjct: 114 YIVFGKPSVF--NGRINIAHPDID---NASELKLSTMGLQPYYNTTEKMKRSSLNSHAIE 168
Query: 399 DTIARALQALPANFDPVPKE----ITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFD 454
++ +Q L +P+P+ I E L+ L +A M IH P + + A+ RL F+
Sbjct: 169 KMMSAVVQQLR---EPLPETLSPAILTEHHLMPLTEALMNIHFPANPELLRKAQYRLKFE 225
Query: 455 EFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPR--LNAAYMEGWSSLTKKLLRALPYSL 512
E FY+QL L ++ K D+ RK R + E +++ K LP+ L
Sbjct: 226 ELFYVQLNIL---------RYAK----DRQRKYRGYVFETVGEIFNTFYAK---NLPFEL 269
Query: 513 TSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELL 572
T +Q + EI D+ MNRLLQGDVG GKT+VA ++ + + +GYQA M PTE+L
Sbjct: 270 TGAQKRVLKEIRRDVGSGKQMNRLLQGDVGSGKTLVALMSMLIALDNGYQACMMAPTEIL 329
Query: 573 ATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAE 632
A QH+E + +LL M+ ++ LLTGS K+ I L TGD+ ++IGTH++I +
Sbjct: 330 ANQHFETIRELLYGMD-----IRVELLTGSVKGKKREAILTGLLTGDVRILIGTHAVIED 384
Query: 633 KVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLA 692
V FS+L L ++DEQ RFGV QR R +K + P PHVL
Sbjct: 385 TVNFSSLGLVVIDEQHRFGVAQRARLWTK---------------NAQP-------PHVLV 422
Query: 693 MSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
M+ATPIPRTLA+ LYGD+ ++ I +LPPGR PI T
Sbjct: 423 MTATPIPRTLAMTLYGDLDVSVIDELPPGRKPIVT 457
>gi|169834385|ref|YP_001695073.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae
Hungary19A-6]
gi|168996887|gb|ACA37499.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae
Hungary19A-6]
Length = 671
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 164/532 (30%), Positives = 255/532 (47%), Gaps = 99/532 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S N ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLNGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ L+ L ++ +G + + WS
Sbjct: 197 LAEYKQALRRIKFEELFYFQM-----QLQTLKSENRVQG-----------SGLVLDWSQE 240
Query: 501 TKKLLRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
++A LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +
Sbjct: 241 KVTAVKASLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTA 300
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
GYQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+
Sbjct: 301 GYQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGE 353
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 354 ADLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN- 398
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 --------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|427385577|ref|ZP_18881884.1| ATP-dependent DNA helicase RecG [Bacteroides oleiciplenus YIT
12058]
gi|425726616|gb|EKU89479.1| ATP-dependent DNA helicase RecG [Bacteroides oleiciplenus YIT
12058]
Length = 698
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 169/515 (32%), Positives = 251/515 (48%), Gaps = 95/515 (18%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIV 285
+ G Y+L LL++FP Y D +I EI + ++++
Sbjct: 25 KELGIYSLHDLLYYFPYKYVDRSR----------IYYIHEI--------DGAMPYIQL-- 64
Query: 286 GCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIE---GKHKVGEF 342
EI ET + G+++++ H F GT + + + I+ GK+KV +
Sbjct: 65 KGEILSFET--------VGEGRQRRLVAH---FSDGTGVVDLVWFQGIKFLIGKYKVHQE 113
Query: 343 VCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG-RPYPIYPSK---GGLNASLLR 398
V GK N + +ID D +L L G +PY K LN+ +
Sbjct: 114 YIVFGKPSVF--NGRINIAHPDID---DASELKLSTMGLQPYYNTSDKMKRSSLNSHAIE 168
Query: 399 DTIARALQALPANFDPVPKE----ITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFD 454
++ +Q L +P+P+ I E L+ L DA IH P + + A+ RL F+
Sbjct: 169 KMMSAVVQQLR---EPLPETLSPAILAEHHLMPLTDALRNIHFPANPELLRKAQYRLKFE 225
Query: 455 EFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPR--LNAAYMEGWSSLTKKLLRALPYSL 512
E FY+QL L ++ + D+ RK R + E +++ K LP+ L
Sbjct: 226 ELFYVQLNIL---------RYAR----DRQRKYRGYIFETVGEIFNTFYAK---NLPFEL 269
Query: 513 TSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELL 572
T +Q + EI D+ MNRLLQGDVG GKT+VA ++ + + +GYQA M PTE+L
Sbjct: 270 TGAQKRVLKEIRRDVGSGKQMNRLLQGDVGSGKTLVALMSMLIALDNGYQACMMAPTEIL 329
Query: 573 ATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAE 632
A QHYE + + L M+ ++ LLTGS K+ I L TGD+ ++IGTH++I +
Sbjct: 330 ANQHYETIREFLYGMD-----IRVELLTGSIKGKKREAILTGLLTGDVHILIGTHAVIED 384
Query: 633 KVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLA 692
V FS+L L ++DEQ RFGV QR R +K + P PHVL
Sbjct: 385 TVNFSSLGLVVIDEQHRFGVAQRARLWTK---------------NVQP-------PHVLV 422
Query: 693 MSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
M+ATPIPRTLA+ LYGD+ ++ I +LPPGR PI T
Sbjct: 423 MTATPIPRTLAMTLYGDLDVSVIDELPPGRKPIVT 457
>gi|322419244|ref|YP_004198467.1| ATP-dependent DNA helicase RecG [Geobacter sp. M18]
gi|320125631|gb|ADW13191.1| ATP-dependent DNA helicase RecG [Geobacter sp. M18]
Length = 769
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 180/599 (30%), Positives = 272/599 (45%), Gaps = 122/599 (20%)
Query: 162 MDAELRVDRFGLSEAWPSLYPALPNESSTSSEVGSLPSEASIEPLLDKCISCVPGLSKRL 221
+D LRV R + PA P ++ V S P E L ++ + G+ +L
Sbjct: 35 VDGTLRVTRHAPVKETKR-TPAKP----AAAAVISAPEE------LKTPMTAIKGVGPKL 83
Query: 222 YHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFIGEIISSRGMKAGCSFS 279
L G T+ L+ P Y D + + +L G F ++S+ +
Sbjct: 84 ADLLAKKGIVTVEDALYLLPNRYEDRRQLKRIAELRPGNSEAFFATVVSAEALTTKGGRR 143
Query: 280 FLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKV 339
+ E IV E +G + H F +FT +
Sbjct: 144 YFEAIVKDE----------------TGSLPLKWFHFHPQFLKKQFTP----------GRR 177
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNID-------VLKDEDDLSLRAKGRPYPIYPSKGGL 392
G F+ + R +H E+ E+ + + +D D+ GR P+YP G+
Sbjct: 178 GIFIGDVSQFGFQREMHHPEV-EWAAEGEDLEQVMARDPDNF-----GRILPVYPLTEGV 231
Query: 393 NAS----LLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE-ADL- 446
+ ++RDT+ R + L + P+E+ + L L A HQP ADL
Sbjct: 232 SQKVMRRIMRDTVQRYSRYLKGSL---PEELLRRHRLSSLPVAMREAHQPDPSGSIADLN 288
Query: 447 -----ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWS--- 498
A + L FDE F+LQLG +K G+ A +G S
Sbjct: 289 NGRSEAHRSLAFDELFFLQLG----------LAMKKRGI-----------ALEDGISFKV 327
Query: 499 --SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEV 556
TK+LL+ LP+SLT +Q +SEI D+ P PM+RL+QGDVGCGKT+VA +A +
Sbjct: 328 THRYTKELLKLLPFSLTGAQKRVLSEIKEDMIAPHPMHRLVQGDVGCGKTLVALMAALIC 387
Query: 557 IGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQ 616
+ + YQ A M PTELL+ QHY ++ + + +ALLT S K + + +
Sbjct: 388 VENDYQVAIMAPTELLSEQHYLNIHGYCERL-----GISVALLTASVKGKSDTL--EKIA 440
Query: 617 TGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNS 676
+G +V+GTH++I EKVEF L L I+DEQ RFGVVQR A++
Sbjct: 441 SGQTRVVVGTHAVIQEKVEFHRLGLGIIDEQHRFGVVQR----------------ALLKK 484
Query: 677 DGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
GS P +L M+ATPIPRTL++ ++GD+SL+ I +LPPGR PI+T ++ + +
Sbjct: 485 KGS-------NPDILVMTATPIPRTLSMTVFGDLSLSVIDELPPGRTPIETRMVRESRR 536
>gi|304437335|ref|ZP_07397294.1| DNA helicase RecG [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304369591|gb|EFM23257.1| DNA helicase RecG [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 706
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 165/534 (30%), Positives = 253/534 (47%), Gaps = 91/534 (17%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFIG 264
L ++ V G+ + L G T+ LL +PR Y D +DL G G
Sbjct: 21 LTDSVNAVRGVGVKKAALLARLGVRTVYDLLTFYPRAYEDQSRITRIMDLAAGTRATVHG 80
Query: 265 ---EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRG 321
+++ + + G F+ L +VG +G + ++ + +
Sbjct: 81 VIQQVVERQTRRRG--FTVLTALVGD----------------GTGYAQAVWFNQR----- 117
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVR-AMRSNNHYEMREY-NIDVLKDEDDLSLRAK 379
FLK GK + G+ + ++GKV A + +L ++D + A
Sbjct: 118 -------FLK---GKLRAGQRILLTGKVDYAYGGGGQMAFSPVTSFALLGSQEDAT--AH 165
Query: 380 GRPYPIYPSKGGLNASLLR----DTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGI 435
P+Y + GL LR D +A A +AL + +P++I E+ L+ A+ I
Sbjct: 166 LGILPVYAATEGLTQKQLRQMTADVLAHAGEAL---METLPEQIRAEYHLIGRAAAFRQI 222
Query: 436 HQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYME 495
H PK +E AR+RL F+E + +Q G L + T +EG+ R N A
Sbjct: 223 HFPKDTEELAAARRRLAFEELYLIQCGLLALKKQ---TAEHEEGIAH-----RANGA--- 271
Query: 496 GWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
L ++ ALP++LT Q +EI D++ P+PM RL+QGDVG GKT +A LA ++
Sbjct: 272 ----LIARVRDALPFALTEDQEKVWAEISRDMEAPLPMRRLVQGDVGSGKTAIALLALVK 327
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
+ SG Q A M PTE+LA QHY+ L +LL + ++ L+G K+ + L
Sbjct: 328 TVESGCQGALMAPTEILARQHYDGLRELLTPL-----GIRVGFLSGRLTKKEHTEVLSAL 382
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
+I ++IGTH+LI E V F +L L + DEQ RFGV QR K SG
Sbjct: 383 AAHEIDIIIGTHALIQEGVAFDSLGLVVTDEQHRFGVAQRSALEKK-------SG----- 430
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYI 729
+ P VL M+ATPIPRT+ L +YGD+ +++I LPPGR PI+T++
Sbjct: 431 ----------VVPDVLVMTATPIPRTMTLTVYGDLDVSRIEHLPPGRQPIRTFL 474
>gi|254383283|ref|ZP_04998636.1| ATP-dependent DNA helicase [Streptomyces sp. Mg1]
gi|194342181|gb|EDX23147.1| ATP-dependent DNA helicase [Streptomyces sp. Mg1]
Length = 738
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 163/550 (29%), Positives = 247/550 (44%), Gaps = 89/550 (16%)
Query: 205 PLLDKCI--SCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIF 262
P LD+ + + P +K L QL G +T LLHH+PR YA+
Sbjct: 12 PALDEDLKKTLGPATAKVLAEQL---GLHTALDLLHHYPRKYAER--------------- 53
Query: 263 IGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGT 322
GE+ + + V V ++AD ++ + G+ K++ + +
Sbjct: 54 -GELTALTELADQLDE---HVTVVAQVADAR------ILTFNGGRGKRLEVTITDG--NG 101
Query: 323 RFTSIPFLKSIEGKHKV---GEFVCVSGKVRAMRSNNHYEMREYN-IDVLKDEDDLSLRA 378
R + F + HK G +GKV Y + + D +
Sbjct: 102 RLQLVFFGAGVHKPHKELLPGTRAMFAGKVGMFNRKLQLSHPAYEPLGADASDQDAATAF 161
Query: 379 KGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQP 438
GR PIYP+ L + + + L + DP+P + + GL+ L +A + IH+P
Sbjct: 162 AGRLIPIYPACAKLESWKIAKCVDAVLPSARETVDPLPPALREGRGLVPLTEALLKIHRP 221
Query: 439 KHIDEADLARKRLIFDEFFYLQLG-----RLYQMLEGLGTQFEKEGLLDKYRKPRLNAAY 493
+ + AR+RL +DE F LQ+ R L + + GLLD +
Sbjct: 222 ATKADVEDARQRLKWDEAFVLQVALARRRRADSQLPAVPRRPVPGGLLDAFDA------- 274
Query: 494 MEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLAC 553
LP++LT Q + EI DL PM+RLLQG+VG GKT+VA A
Sbjct: 275 -------------KLPFTLTEGQQTVSKEIFDDLATEHPMHRLLQGEVGSGKTMVALRAM 321
Query: 554 MEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEE------DKHKPKIALLTGSTPVKQ 607
+ V+ G QAA + PTE+LA QH+ + +++ + E K+ LLTGS +
Sbjct: 322 LAVVDCGGQAAMLAPTEVLAQQHHRSITEMMGELAEGGMLGGSDQGTKVVLLTGSMGMPA 381
Query: 608 SRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSM 667
R DL TG+ +VIGTH+LI +KV+F L L +VDEQ RFGV QR SK
Sbjct: 382 RRKALLDLVTGEAGIVIGTHALIEDKVQFHDLGLVVVDEQHRFGVEQRDALRSK------ 435
Query: 668 SSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
PH+L M+ATPIPRT+A+ ++GD+ + + LP GR PI T
Sbjct: 436 ----------------GKQPPHLLVMTATPIPRTVAMTVFGDLETSVLDQLPAGRSPIAT 479
Query: 728 YIIEGNEKGY 737
+++ +K +
Sbjct: 480 HVVPAKDKPH 489
>gi|407452287|ref|YP_006724012.1| recG-like helicase [Riemerella anatipestifer RA-CH-1]
gi|403313271|gb|AFR36112.1| RecG-like helicase [Riemerella anatipestifer RA-CH-1]
Length = 696
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 131/359 (36%), Positives = 195/359 (54%), Gaps = 65/359 (18%)
Query: 384 PIYP-----SKGGLN----ASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMG 434
PIY +K G+N +++R+ I + L N +P I L+ +AY
Sbjct: 148 PIYSGSEKLTKRGVNNKFFQTIIREVIKQTSFFLEEN---LPSNILSSLKLIGRREAYQN 204
Query: 435 IHQPKHIDEADLARKRLIFDEFFYLQLG----RLYQMLEGLGTQFEKEGLLDKYRKPRLN 490
IH P++I+ D A KRL F+E F+ QLG + YQ + +G F L+ Y N
Sbjct: 205 IHFPQNINWIDEANKRLKFEEAFFFQLGYGLKKQYQKVSNVGIPFP---LVGDY----FN 257
Query: 491 AAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAF 550
Y LP+ LT++Q + EI D+K+P+ MNRLLQGDVG GKT+VA
Sbjct: 258 NFYQ-----------NKLPFELTNAQKRVLKEIRNDMKKPIQMNRLLQGDVGSGKTMVAL 306
Query: 551 LACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLD--NMEEDKHKPKIALLTGSTPVKQS 608
L+ + + +G QA M PTE+LA QHY +++LL+ N+E + LLTGST +
Sbjct: 307 LSMLLALDNGTQACLMAPTEILAQQHYNSIVELLEGTNIE-------VRLLTGSTKKSER 359
Query: 609 RMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMS 668
+ I + L++G +++++GTH+++ + V+F L L I+DEQ RFGV QR + SK
Sbjct: 360 KDIHEGLESGRLSILVGTHAILEDAVKFKNLGLGIIDEQHRFGVAQRAKLWSK------- 412
Query: 669 SGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PH+L M+ATPIPRTLA++ Y D+ ++ I +LP GR PI T
Sbjct: 413 ---------------NKIPPHILIMTATPIPRTLAMSFYSDLDVSVIDELPTGRKPIIT 456
>gi|326330642|ref|ZP_08196946.1| ATP-dependent DNA helicase RecG [Nocardioidaceae bacterium Broad-1]
gi|325951483|gb|EGD43519.1| ATP-dependent DNA helicase RecG [Nocardioidaceae bacterium Broad-1]
Length = 754
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 163/552 (29%), Positives = 252/552 (45%), Gaps = 93/552 (16%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTY---ADL-QNAQIDLDDGQYFIF 262
L+ I V G SK + G T+ LL+HFPR Y ADL Q Q L +G+
Sbjct: 5 LESPIEAVLGNSKHATKFTKGLGLRTVGDLLYHFPRRYLRTADLSQTPQ--LHEGEMLTV 62
Query: 263 IGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIY-LHLKKFFRG 321
+GE++ S T+ +G +++ K L L F +
Sbjct: 63 LGEVVRS-----------------VVRQHTDRRTGRPAYRVETQLKAGTADLQLTFFSKS 105
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDD-------- 373
R + + + G FV +G R +++ + V D D
Sbjct: 106 QRIAE--WRRGVLAPGVRGVFVGKAGSFR-----GEWQLANPQMVVFGDPSDSENAAEAA 158
Query: 374 ---LSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFD 430
+++ +PIYP GL + + A Q + D +P+++ + + + L D
Sbjct: 159 DNQMAVEELTELFPIYPLTAGLQHWDVMRAVRFARQVVEDVTDVLPEQLRETYDVPGLRD 218
Query: 431 AYMGIHQPKHIDEADLARKRLIFDEFFYLQL--GRLYQMLEGLGTQFEKEGLLDKYRKPR 488
A IH P + + A+ R F+E LQL GR + L+ LGT
Sbjct: 219 ALDLIHAPHELKDVQRAQHRFRFEEALGLQLVLGRRRRALQALGT--------------- 263
Query: 489 LNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVV 548
A G L + LP++LT Q + E+ L QP PMNRLLQG+VG GKT+V
Sbjct: 264 --TARTGGVHHLLEAFDARLPFTLTKGQETIGEELETALAQPHPMNRLLQGEVGSGKTLV 321
Query: 549 AFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEE----------DKHKPKIAL 598
A A + V+ SG QAA + PTE+LA QH+ + +L ++ D+ + + L
Sbjct: 322 ALRAMLRVVDSGGQAALLAPTEVLAQQHHRSITAMLGDLAASGLAGGLFAGDQEQTHVEL 381
Query: 599 LTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRF 658
LTGS Q + + TG+ +V+GTH+L+ ++V F L L +VDEQ RFGV QR
Sbjct: 382 LTGSMTKTQRKGPLSRIATGEAGIVVGTHALLQDQVMFDDLGLVVVDEQHRFGVEQRA-- 439
Query: 659 NSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDL 718
A+ + G+P PH+L M+ATPIPRT+A+ ++GD+ ++ +T+L
Sbjct: 440 -------------ALTDKAGTP-------PHLLVMTATPIPRTVAMTVFGDLEVSTLTEL 479
Query: 719 PPGRIPIKTYII 730
P GR I+T ++
Sbjct: 480 PAGRAEIQTNLV 491
>gi|417837324|ref|ZP_12483563.1| ATP-dependent DNA helicase RecG [Lactobacillus johnsonii pf01]
gi|338762519|gb|EGP13787.1| ATP-dependent DNA helicase RecG [Lactobacillus johnsonii pf01]
Length = 679
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 168/524 (32%), Positives = 252/524 (48%), Gaps = 101/524 (19%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGEIIS- 268
++ + G+ + L + G T+ LL +FP Y DL+ +D ++DGQ + G +++
Sbjct: 12 VTELKGVGAKTATALASLGINTIYDLLFYFPFRYDDLETIPLDQIEDGQKVLLKGMVVTD 71
Query: 269 ---SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFT 325
SR SF ++ + +I +VN F
Sbjct: 72 PFVSRFGYRKTRLSF-KMKIDHDII---------MVN---------------------FF 100
Query: 326 SIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPI 385
+ P+LK K + G+ V V GK + R + + + + K + + PI
Sbjct: 101 NQPWLKD---KVESGKEVAVYGKYQVARQS----LSGFKLVAEKKDSGFA--------PI 145
Query: 386 YPSKGGLNASLLRDTIARALQ-ALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
Y L + L+ I AL+ A+ + +P I +++ LL +H PK+ +EA
Sbjct: 146 YSVNRHLKQNKLQKLIDLALEEAINEVGETIPASIREKYRLLSDRVLVEKMHHPKNGNEA 205
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
+AR+ IF EFF Q+ +L Q+L + G+ KY + K+L
Sbjct: 206 KIARRSAIFREFFLFQM-QLAQLLSQRNE--DAPGVEKKYD------------LAAVKEL 250
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
+ +P+ L+ Q ++EI DL M RLLQGDVG GKTVVA A + +GYQAA
Sbjct: 251 IEEIPFELSDDQKKVVNEIFADLHSKRQMRRLLQGDVGSGKTVVAVFAIYAAVTAGYQAA 310
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKP---KIALLTGSTPVKQSRMIRKDLQTGDIT 621
MVPTE+LA QH+ + +LL KP ++ALLTG T + + I ++L G I
Sbjct: 311 LMVPTEILAQQHFAKIDELL--------KPLGVRVALLTGDTKDLEKKEIYRELADGTIN 362
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+VIGTH+LI + V F L L I+DEQ RFGV QR T + G
Sbjct: 363 VVIGTHALIQKDVHFKNLGLVIIDEQHRFGVNQRN--------TLIKKG----------- 403
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
AP +LAM+ATPIPRTLAL +YGDM++++I LP GR P+
Sbjct: 404 ----DAPDILAMTATPIPRTLALTVYGDMAVSEIRHLPKGRKPV 443
>gi|317059561|ref|ZP_07924046.1| ATP-dependent DNA helicase recG [Fusobacterium sp. 3_1_5R]
gi|313685237|gb|EFS22072.1| ATP-dependent DNA helicase recG [Fusobacterium sp. 3_1_5R]
Length = 679
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 160/521 (30%), Positives = 253/521 (48%), Gaps = 84/521 (16%)
Query: 217 LSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFIGEIISSRGMKA 274
L + Y L+ G T+ LL++FPR Y + N + +L +Y + +++
Sbjct: 12 LDSKKYKGLKALGIKTVHDLLYYFPRAYDNRSNIKKIAELRMEEYAVIHAKLLHVYSAPT 71
Query: 275 GCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFL-KSI 333
+G ++ T G SG F + +P+L KS+
Sbjct: 72 K---------LGRKMTKATATDG-------SG------------FLEIVWFGMPYLQKSL 103
Query: 334 EGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLN 393
+ + E++ V RAM + ++M + K + + +G PIY S L+
Sbjct: 104 KLQE---EYIFVGTVKRAMGA---FQMTNPEFKLSKGQ-----KMRGEILPIYSSHKNLS 152
Query: 394 ASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIF 453
+ LR + L + +PKEI Q++ +L A IH P + A++R
Sbjct: 153 QNRLRKYLKEILFENSLLSENIPKEICQKYNILGRNQALSEIHFPSSEKILEEAKRRFAI 212
Query: 454 DEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLT 513
+E +++G L +F + L + ++EG +L K+ L +LP+ LT
Sbjct: 213 EELLIIEMGIL-------KNRFLTDALTQAF-------YHLEGKKTLVKQYLSSLPFQLT 258
Query: 514 SSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLA 573
+Q I+EI DL+Q +NRL+QGDVG GKT+VA + + +I +GYQ A M PTE+LA
Sbjct: 259 KAQKKVITEIYKDLEQGRIVNRLVQGDVGSGKTMVAMVLLLYMIENGYQGALMAPTEILA 318
Query: 574 TQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEK 633
QHY L + M+E ++ LLTGS K+ R + DL+ G+I L+IGTH+L+ E+
Sbjct: 319 IQHY---LGIYSKMQE--LGLRVELLTGSIRGKKRRKLLDDLKEGNIDLLIGTHALLEEE 373
Query: 634 VEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAM 693
V F L ++DEQ RFGV+QR + K T++ L M
Sbjct: 374 VRFHQLGFIVIDEQHRFGVLQRKKLREKGILTNL-----------------------LVM 410
Query: 694 SATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
+ATPIPR+LAL++YGD+ ++ + +LPPGR PIKT I E
Sbjct: 411 TATPIPRSLALSIYGDLDVSILDELPPGRSPIKTKWISTKE 451
>gi|241895658|ref|ZP_04782954.1| ATP-dependent DNA helicase RecG [Weissella paramesenteroides ATCC
33313]
gi|241871025|gb|EER74776.1| ATP-dependent DNA helicase RecG [Weissella paramesenteroides ATCC
33313]
Length = 678
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 171/535 (31%), Positives = 254/535 (47%), Gaps = 93/535 (17%)
Query: 205 PLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADL-QNAQIDLDDGQYFIFI 263
P L IS + G+ + L G +T+ LL ++PR Y DL Q + DG+ F
Sbjct: 2 PSLLDSISELSGVGPKREQALNKLGVFTIDDLLTYYPRRYNDLAQKLPSETLDGEKVTFK 61
Query: 264 GEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTR 323
G +++S + + F + + T + + I
Sbjct: 62 G-LVTSPPVVSRLGFKKTRL-------NFRLTVSHDTIQIS------------------- 94
Query: 324 FTSIPFL-KSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
F + P+L K+I VGE V + G +A +S + +M N +E++L
Sbjct: 95 FFNQPWLSKNI----VVGEEVAIYGTYNKAHQSLSAIKMMPKN-----NENELE------ 139
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALP--ANFDPVPKEITQEFGLLCLFDAYMGIHQPK 439
IYPS + A ++D I +AL + +P +I + + L+ D G+H P+
Sbjct: 140 --AIYPSSKEIKAGTIKDLIFQALGKYGDLLTQEIIPSDIRRRYRLMNYHDTVFGMHAPE 197
Query: 440 HIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSS 499
+ A AR+ F EFF Q+ RL Q K+ +D++ + R + +
Sbjct: 198 NEFLAGEARRTASFMEFFVFQM-RL---------QVIKQ--MDRHNQGR----SVNFDNQ 241
Query: 500 LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
K ++ LP+ LT++Q ++EI+ D+++PV MNRLLQGDVG GKTVVA LA I +
Sbjct: 242 QLKSFIKVLPFELTAAQKKVVNEIVRDMRRPVHMNRLLQGDVGSGKTVVAALAMYAAITA 301
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
G QA M PTE+LA QH + D E ++ +LTG+T R I DL GD
Sbjct: 302 GMQATLMAPTEILAQQHARTIGNYFDPSE-----VRVEILTGTTKAAARRQILADLAEGD 356
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
I ++IGTH+LI + F L LA++DEQ RFGV QR VN
Sbjct: 357 IDILIGTHALIQPDIAFHNLGLAVIDEQHRFGVQQRATLRK-----------VGVN---- 401
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
P +LAM+ATPIPRTLA+ YG+M ++ I LP GR IKTY + N+
Sbjct: 402 --------PDILAMTATPIPRTLAITAYGEMDVSIIDQLPAGRKKIKTYWLRHNK 448
>gi|387626889|ref|YP_006063065.1| ATP-dependent DNA helicase [Streptococcus pneumoniae INV104]
gi|444382330|ref|ZP_21180533.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae PCS8106]
gi|444385567|ref|ZP_21183639.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae PCS8203]
gi|301794675|emb|CBW37126.1| ATP-dependent DNA helicase [Streptococcus pneumoniae INV104]
gi|444249637|gb|ELU56125.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae PCS8203]
gi|444252604|gb|ELU59066.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae PCS8106]
Length = 671
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 163/531 (30%), Positives = 256/531 (48%), Gaps = 97/531 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKIKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ QML+ + + GL+ + + ++ A +
Sbjct: 197 LAEYKQALRRIKFEELFYFQMQ--LQMLKS-ENRVQGSGLVLNWSQEKVTAVKV------ 247
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
+LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +G
Sbjct: 248 ------SLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTAG 301
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+
Sbjct: 302 YQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGEA 354
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 355 DLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN-- 398
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 -------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|423292441|ref|ZP_17271019.1| ATP-dependent DNA helicase RecG [Bacteroides ovatus CL02T12C04]
gi|423294631|ref|ZP_17272758.1| ATP-dependent DNA helicase RecG [Bacteroides ovatus CL03T12C18]
gi|392661676|gb|EIY55252.1| ATP-dependent DNA helicase RecG [Bacteroides ovatus CL02T12C04]
gi|392675822|gb|EIY69263.1| ATP-dependent DNA helicase RecG [Bacteroides ovatus CL03T12C18]
Length = 698
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 173/532 (32%), Positives = 257/532 (48%), Gaps = 97/532 (18%)
Query: 209 KCISCV-PGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEII 267
K IS V P + L +LE Y+L L+++FP Y D +I EI
Sbjct: 10 KFISGVGPQKAAVLNKELE---IYSLHDLIYYFPYKYIDRSR----------IYYIHEI- 55
Query: 268 SSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ ++++ EI ET I G+++++ H F GT +
Sbjct: 56 -------DGNMPYIQL--KGEILGFET--------IGEGRQRRLTAH---FSDGTGVVDL 95
Query: 328 PFLKSIE---GKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG-RPY 383
+ + I+ GK+K+ E + GK N + ++D DDL L + G +PY
Sbjct: 96 VWFQGIKYILGKYKLHEEYIIFGKPTVF--NGRINVAHPDVD---KPDDLKLSSVGLQPY 150
Query: 384 PIYPSK---GGLNASLLRDTIARALQALPANFDPVPKEIT----QEFGLLCLFDAYMGIH 436
K LN+ + +A +Q + +P+P+ ++ E L+ L +A IH
Sbjct: 151 YSTTEKMKRSFLNSHAIEKMMATVIQQIQ---EPLPETLSPKLLTEHHLMPLTEALWNIH 207
Query: 437 QPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG 496
P + D A+ RL F+E FY+QL L ++ K+ R+ R E
Sbjct: 208 FPTNPDVLRRAQYRLKFEELFYVQLNIL---------RYAKD------RQKRYRGYIFEK 252
Query: 497 WSSLTKKLL-RALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
+ + LP+ LT +Q + EI D+ MNRLLQGDVG GKT+VA ++ +
Sbjct: 253 VGDVFNTFYTKNLPFQLTGAQKRVLKEIRNDVGSGRQMNRLLQGDVGSGKTLVALMSMLL 312
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
+ +GYQA M PTE+LA QHYE + +LL M+ ++ LLTGS K+ I L
Sbjct: 313 ALDNGYQACMMAPTEILANQHYETIKELLFGMD-----IRVELLTGSIKGKRREAILTGL 367
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
TGD+ ++IGTH++I + V FS+L ++DEQ RFGV QR R SK
Sbjct: 368 LTGDVKILIGTHAVIEDTVNFSSLGFVVIDEQHRFGVAQRARLWSK-------------- 413
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ P PHVL M+ATPIPRTLA+ LYGD+ ++ I +LPPGR PI T
Sbjct: 414 -NVQP-------PHVLVMTATPIPRTLAMTLYGDLDVSVIDELPPGRKPITT 457
>gi|392390702|ref|YP_006427305.1| ATP-dependent DNA helicase RecG [Ornithobacterium rhinotracheale
DSM 15997]
gi|390521780|gb|AFL97511.1| ATP-dependent DNA helicase RecG [Ornithobacterium rhinotracheale
DSM 15997]
Length = 701
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 129/352 (36%), Positives = 191/352 (54%), Gaps = 49/352 (13%)
Query: 384 PIYPS-----KGGLNASLLRDTIARALQAL-PANFDPVPKEITQEFGLLCLFDAYMGIHQ 437
P+Y + K G+ + R I + L+ + P + + EI +++ L+ A+ IH
Sbjct: 151 PVYSTTEKIQKKGITPRIWRGMIEQVLEMVNPYIRENLSSEIKRKYDLIDRNKAFYQIHF 210
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGW 497
PK+ +E + A+KRL F+EF++L L QM + +G +K + A+
Sbjct: 211 PKNAEELNQAQKRLKFEEFYFLHLS--LQMQKAIG------------KKKFKSQAFSSVG 256
Query: 498 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
L + LT++Q I EI D+ + MNRLLQGDVG GKT+VAF++ +
Sbjct: 257 DYFNDFYHHHLGFELTNAQKRVIREIRSDMAKSSQMNRLLQGDVGSGKTIVAFMSMLIAA 316
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
+G+Q+ M PTE+LA QHY L E DK +IALLTGST + R I + L+
Sbjct: 317 DNGFQSLLMAPTEILAQQHYYGL-----KQEADKMGLEIALLTGSTKTAERREIHQKLED 371
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGR-FNSKLYYTSMSSGMAMVNS 676
G + ++GTH+LI +KV+F L AI+DEQ RFGV QR + FN +
Sbjct: 372 GSLHFLVGTHALIEDKVKFKNLGFAIIDEQHRFGVAQRAKIFNKGI-------------- 417
Query: 677 DGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTY 728
+ PH+L M+ATPIPRTLA+ LYGD+ ++ I +LP GR PI+T+
Sbjct: 418 ---------LPPHMLIMTATPIPRTLAMTLYGDLDISIIDELPAGRKPIQTH 460
>gi|291459590|ref|ZP_06598980.1| ATP-dependent DNA helicase RecG [Oribacterium sp. oral taxon 078
str. F0262]
gi|291417868|gb|EFE91587.1| ATP-dependent DNA helicase RecG [Oribacterium sp. oral taxon 078
str. F0262]
Length = 564
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/364 (36%), Positives = 190/364 (52%), Gaps = 48/364 (13%)
Query: 379 KGRPYPIYPSKGGLNASLLRDTIARALQALPAN------FDPVPKEITQEFGLLCLFDAY 432
+G P P+YP GL+ +R + AL + FD VP+ + + L L+++
Sbjct: 16 QGVPEPVYPKSAGLSGQTIRKAVRAALLGFSEDPSPLHAFDFVPETLRRRRDLPGLYESL 75
Query: 433 MGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAA 492
+H P +EA LAR+R ++E L L + E G + +
Sbjct: 76 SAVHCPGSEEEALLARERFSYEELLLFSLALLRRKRERSGER----------------SR 119
Query: 493 YMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLA 552
++ ++ L +LP+SLT Q AI EI +L MNRLLQGDVG GKTVVAF A
Sbjct: 120 FLLTERGEAERFLHSLPFSLTEGQREAIREIEGELSGGFVMNRLLQGDVGSGKTVVAFYA 179
Query: 553 CMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIR 612
SG+QAA M PTELLA QHYE L ++L + + ALLTGS + R +
Sbjct: 180 LFLAASSGFQAAMMAPTELLARQHYEKLREILKKI---SLPWEAALLTGSLSRGEKRELC 236
Query: 613 KDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMA 672
+ ++ G++ L++GTH+L E + + AL L + DEQQRFGV+QR F+ K
Sbjct: 237 RRIEEGELRLILGTHALFQEGIHYPALSLVVTDEQQRFGVLQRKAFSEK----------- 285
Query: 673 MVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEG 732
GS PH+L +SATPIPRTL+L LY DM +++I P R+P+K +I
Sbjct: 286 -----GS-------RPHILLLSATPIPRTLSLLLYQDMQVSRIPGRPAERLPVKNALIGA 333
Query: 733 NEKG 736
E+G
Sbjct: 334 GERG 337
>gi|256372288|ref|YP_003110112.1| DEAD/DEAH box helicase domain-containing protein [Acidimicrobium
ferrooxidans DSM 10331]
gi|256008872|gb|ACU54439.1| DEAD/DEAH box helicase domain protein [Acidimicrobium ferrooxidans
DSM 10331]
Length = 720
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 159/536 (29%), Positives = 244/536 (45%), Gaps = 102/536 (19%)
Query: 218 SKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDD--GQYFIFIGEIISSRGMKAG 275
S ++ LE T L+ ++PR Y D + D G+ + IG I S
Sbjct: 21 SPKVVKGLEALDVVTAYDLVTYYPRRYVDRTRHVMIADAVPGEEVVLIGRIAS------- 73
Query: 276 CSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEG 335
V + +K+ + L + T + F +
Sbjct: 74 -------------------------VRVVPTRKRSMTLVEARLVDETGSVGLRFFRQPWR 108
Query: 336 KHKVGEF---VCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGL 392
++G + V GKV R ++ +D + D GR P+YP + G
Sbjct: 109 AKQLGRLHGDIAVFGKVELFRKER--QLVNPLVDPIGDR-------TGRIVPLYPLRDG- 158
Query: 393 NASLLRDTIARALQALPANFDPV----PKEITQEFGLLCLFDAYMGIHQPKHIDEADLAR 448
A + IA A+ L F P+ P+ + GLL +A IH P +++ AR
Sbjct: 159 -AGIDSGAIASAVLGLLERFSPIAETIPRAVRDALGLLGREEALRAIHAPATLEQRLEAR 217
Query: 449 KRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLN------AAYMEGWSSLTK 502
+R+ F+E F +Q+ ML GL+ + R A + G
Sbjct: 218 RRIAFEELFRIQV-----ML----------GLVRRERDAHQRGFAHDVAPFGPGTGRRVA 262
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
+LL LP+SLT++Q +++I D+++ PM+RLLQGDVG GKT+VA +A + I G+Q
Sbjct: 263 ELLARLPFSLTAAQRRVVTDIAGDMQRDRPMHRLLQGDVGAGKTLVALIAALFAIQGGHQ 322
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKP-----------KIALLTGSTPVKQSRMI 611
AA + PTE+LA QH+ +L LL E + + ++ALLTG+ K+ I
Sbjct: 323 AALLAPTEVLAEQHFRTILSLLGTAREARERTPGLFDDEVAPIEVALLTGTVASKRRADI 382
Query: 612 RKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGM 671
+ L G I LV+GTH+L+ E V ++L L +VDEQ RFGV QR + + ++ +
Sbjct: 383 VEGLARGTIDLVVGTHALLTEGVNLASLGLVVVDEQHRFGVEQRSLLRDR--HAEIAGRV 440
Query: 672 AMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
A L M+ATPIPRT A+ +YGD+ L+ I +LPPGR PI+T
Sbjct: 441 A----------------DTLVMTATPIPRTAAMTVYGDLDLSVIDELPPGRTPIRT 480
>gi|89891409|ref|ZP_01202915.1| ATP-dependent DNA helicase RecG [Flavobacteria bacterium BBFL7]
gi|89516440|gb|EAS19101.1| ATP-dependent DNA helicase RecG [Flavobacteria bacterium BBFL7]
Length = 701
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 139/397 (35%), Positives = 202/397 (50%), Gaps = 54/397 (13%)
Query: 338 KVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNA-SL 396
K+ E V GKV + + Y + ++++LK+ R + PIYPS L ++
Sbjct: 110 KLNEPYVVYGKVS--KYGSKYNIAHPDVELLKEHRS---RQQSAMTPIYPSTEQLTKRNV 164
Query: 397 LRDTIARALQALPANF-----DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRL 451
+ R +Q L + + + +I + L+ A H PK + RL
Sbjct: 165 TNKMVVRMMQQLFSEVQNSFTETLSGQIRAQHQLVDKNTAMYNAHFPKSAALLQQSIYRL 224
Query: 452 IFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNA-AYMEGWSSLTKKLLRALPY 510
F+E F++Q+ L Q ++ RK R+ A+ + LP+
Sbjct: 225 KFEELFFIQMELLLQ---------------NRIRKSRIKGYAFEKVGEQFNDFYSNHLPF 269
Query: 511 SLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTE 570
LT +Q + EI D+ MNRLLQGDVG GKT+VA L C+ I +G+QA M PTE
Sbjct: 270 ELTGAQKRVVKEIRADMGTGAHMNRLLQGDVGSGKTIVAILTCLLAIDNGFQACIMAPTE 329
Query: 571 LLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLI 630
+LA QH++ + +LL N ++ALLTGS K R+I DL+ G + ++IGTH+LI
Sbjct: 330 ILAQQHFQGVSELLKNT-----GLQVALLTGSVKTKARRVIHSDLEDGSLNILIGTHALI 384
Query: 631 AEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHV 690
+KV F L +AIVDEQ RFGV QR + K ++ PHV
Sbjct: 385 EDKVIFKNLGVAIVDEQHRFGVAQRAKLWKK----------------------NNLPPHV 422
Query: 691 LAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
L M+ATPIPRTLA++LYGD+ ++ I +LPPGR IKT
Sbjct: 423 LVMTATPIPRTLAMSLYGDLDISVIDELPPGRKEIKT 459
>gi|300783675|ref|YP_003763966.1| ATP-dependent DNA helicase RecG [Amycolatopsis mediterranei U32]
gi|384146911|ref|YP_005529727.1| ATP-dependent DNA helicase RecG [Amycolatopsis mediterranei S699]
gi|399535559|ref|YP_006548221.1| ATP-dependent DNA helicase RecG [Amycolatopsis mediterranei S699]
gi|299793189|gb|ADJ43564.1| ATP-dependent DNA helicase RecG [Amycolatopsis mediterranei U32]
gi|340525065|gb|AEK40270.1| ATP-dependent DNA helicase RecG [Amycolatopsis mediterranei S699]
gi|398316329|gb|AFO75276.1| ATP-dependent DNA helicase RecG [Amycolatopsis mediterranei S699]
Length = 717
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 153/521 (29%), Positives = 250/521 (47%), Gaps = 75/521 (14%)
Query: 232 TLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIAD 291
T+ LL H+PR YA+ GE+ G++ G + L I
Sbjct: 28 TVSDLLRHYPRRYAER----------------GELTDIAGLELGEHATVLARIEKVSKRR 71
Query: 292 TETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKV-GEFVCVSGKVR 350
+ +G + + + K+ R T F ++ K V G+ +GKV
Sbjct: 72 MKARNGTIIDMVITDGKR-------------RLTCAFFNQAWREKDLVPGKTGLFAGKVS 118
Query: 351 AMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPA 410
A R EY + ++E + P+YP+ G+ + + + L L
Sbjct: 119 AFRDTLQLTNPEYELFDAENEAEAMDNFLAAIIPVYPAAQGMPTWSIAKCVRQVLDVLEV 178
Query: 411 NFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEG 470
+ DP+P E+ + L L +A GIH+P++ + ++KRL +DE +QL
Sbjct: 179 DDDPMPAELRRLHKLSDLDNALRGIHRPENWAHLEASKKRLKWDEAMAVQL--------- 229
Query: 471 LGTQFEKEGLLDKYR-KPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQ 529
+ Q + + P ++ ME + + LP+ LT+ Q EI DL
Sbjct: 230 IFAQRRHSAISRPAKANPHVSGGLMEAFD-------KRLPFDLTAGQRGIGDEIAADLAS 282
Query: 530 PVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEE 589
PMNRLLQG+VG GKTVVA A ++V+ +G QAA + PTE+LA QH L ++L ++ +
Sbjct: 283 EHPMNRLLQGEVGSGKTVVALRAMLQVVDNGRQAAMLAPTEVLAAQHARSLREMLGDLGQ 342
Query: 590 ------DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAI 643
++ ++ LLTGS K+ + ++ +G+ +V+GTH+LI + VEF+ L LA+
Sbjct: 343 AGELGAAENATRVTLLTGSMGAKERKKALLEIVSGEAGIVVGTHALIQDHVEFADLGLAV 402
Query: 644 VDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLA 703
VDEQ RFGV QR ++ +G +PHVL M+ATPIPRT+A
Sbjct: 403 VDEQHRFGVEQRDALRTR------GAG--------------DTSPHVLVMTATPIPRTVA 442
Query: 704 LALYGDMSLTQITDLPPGRIPIKTYIIEGNEK--GYENVYK 742
+ +YGD+ ++ + ++P GR PI T ++ EK +E +++
Sbjct: 443 MTVYGDLEVSALREMPVGRSPIATTVVPVAEKPAWFERIWQ 483
>gi|418189933|ref|ZP_12826445.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47373]
gi|353853660|gb|EHE33641.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47373]
Length = 671
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 163/531 (30%), Positives = 255/531 (48%), Gaps = 97/531 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ QML+ + + GL+ + + ++ A
Sbjct: 197 LAEYKQALRRIKFEELFYFQMQ--LQMLKS-ENRVQGSGLVLNWSQEKVTAVKA------ 247
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
+LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +G
Sbjct: 248 ------SLPFALTQAQEKSLQEILTDMKSDHYMNRLLQGDVGSGKTVVAGLAMFAAVTAG 301
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+
Sbjct: 302 YQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGEA 354
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 355 DLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN-- 398
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 -------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|21674393|ref|NP_662458.1| ATP-dependent DNA helicase RecG [Chlorobium tepidum TLS]
gi|21647574|gb|AAM72800.1| ATP-dependent DNA helicase RecG [Chlorobium tepidum TLS]
Length = 704
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 163/537 (30%), Positives = 240/537 (44%), Gaps = 96/537 (17%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFIGEIIS 268
+ + G+ + L G ++ L FPR Y D + L DG+ +G +
Sbjct: 7 LQVIKGVGPKRAVILAEAGIRSIADLYDCFPRRYLDRTTIKKIGALRDGETVTVVGSVTG 66
Query: 269 SR---GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFT 325
+R G + G F + T G V+ + +FRG +
Sbjct: 67 TRFEGGGRGGSRFK------------AQITDGSGVLEL-------------TWFRGVHY- 100
Query: 326 SIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDED-------DLSLRA 378
F K+I + GE V G+V M+ + D L +D D L
Sbjct: 101 ---FSKTI----RSGELVAAHGRVTFF--GRTPGMQHPDFDKLGGDDESGDGQRDDELYK 151
Query: 379 KGRPYPIYPS-----KGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAY 432
G PIYP+ + GLN++ LR + RA + P + + EI L+ + +AY
Sbjct: 152 TGAIIPIYPTTEAMKQAGLNSAALRRIVHRAFREHPLRITEYLSPEIIAANNLMPIGEAY 211
Query: 433 MGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAA 492
+H P ++ + AR R+ + E F+ QL + E + L +
Sbjct: 212 RQLHFPDSAEQLERARYRMKWSELFFAQLFFALRRTE---------------ERRHLTSV 256
Query: 493 YMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLA 552
E T L LP+++TS+Q A+ EI DLK MNRLLQGDVG GKT+VA A
Sbjct: 257 RFERSGEKTASLHERLPFTMTSAQKQAVREIYHDLKSGRQMNRLLQGDVGSGKTLVAQFA 316
Query: 553 CMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIR 612
+ +G QAAFM PTE+LA QHY L L+ + ++ALLTG K+
Sbjct: 317 MTLAVDNGLQAAFMAPTEILAFQHYAGLKNSLEPL-----GIRVALLTGRQKKKEREEKL 371
Query: 613 KDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMA 672
L+ G+I + +GTH++I V+F L L I+DEQ RFGV+QR K
Sbjct: 372 ARLERGEIDIAVGTHAIIEAGVQFRRLGLVIIDEQHRFGVLQRKALQEKAE--------- 422
Query: 673 MVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYI 729
PHVL M+ATPIPRTL + +YGD+ ++ I ++P GR PI+T +
Sbjct: 423 --------------NPHVLLMTATPIPRTLTMGIYGDLDVSIIAEMPAGRKPIQTRL 465
>gi|443318971|ref|ZP_21048210.1| ATP-dependent DNA helicase RecG [Leptolyngbya sp. PCC 6406]
gi|442781391|gb|ELR91492.1| ATP-dependent DNA helicase RecG [Leptolyngbya sp. PCC 6406]
Length = 575
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 143/356 (40%), Positives = 192/356 (53%), Gaps = 52/356 (14%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
P+Y G++A LR I AL P DP+P ++ + +GL+ L A IH P+ E
Sbjct: 39 PVYRLSRGIDAEDLRHRIQVALAQTPLPDDPLPAKVKRRYGLVDLKIALKQIHFPETETE 98
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
+ AR+RL+FDEFFYL L L L + R P ++ L +
Sbjct: 99 LEAARQRLVFDEFFYLHLALL----------------LHRGRTPVAPGRPLK--LELLGQ 140
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
LP++LT +Q I +I+ DL QP PMNRL+QGDVG GKTVVA AC+ VI G+QA
Sbjct: 141 FQANLPFTLTQAQQRVIVDILDDLAQPFPMNRLVQGDVGSGKTVVAVAACLAVIAQGHQA 200
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKP---KIALLTGSTPVKQSRMIRKDLQTGDI 620
A M PTE LA QHY + L KP ALL G+T K R + DL +G I
Sbjct: 201 ALMAPTETLAEQHYHKVKGWL--------KPLGMTTALLMGATRAKARRALLADLASGQI 252
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
LV+GTH+L++ V ++ L LA++DEQ RFGV QR +K P
Sbjct: 253 DLVVGTHALVSANVTYANLGLAVIDEQHRFGVKQRNALVAK-----------------GP 295
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKG 736
PH+L+M+ATPIPRTLALAL+ D+ ++ I +LPPGR I T ++ +G
Sbjct: 296 N------PHLLSMTATPIPRTLALALHQDVDVSLIDELPPGRKAIITQVLGPEGQG 345
>gi|397690822|ref|YP_006528076.1| ATP-dependent DNA helicase RecG [Melioribacter roseus P3M]
gi|395812314|gb|AFN75063.1| ATP-dependent DNA helicase RecG [Melioribacter roseus P3M]
Length = 723
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 144/426 (33%), Positives = 212/426 (49%), Gaps = 60/426 (14%)
Query: 319 FRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRA 378
F F IP+ K + G + +S K + H + + D + D++
Sbjct: 95 FECVWFQGIPYFKDV---FNPGNYFAISAK-PTITKYGHLQFVHPDFDRISDKESNDFLN 150
Query: 379 KGRPYPIYPSKGGLNASLLRDTIARAL--QALPANFDPV----PKEITQEFGLLCLFDAY 432
G+ P Y L + L D R + QA+ D V P+ I +++ LL L A
Sbjct: 151 TGKIIPFYRIPKELRSINLGDLGLRRIVAQAVSDFADSVKETLPQNIIKDYDLLPLNLAL 210
Query: 433 MGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAA 492
IH P+ ++ + AR R F+E FY +++L L Q L +K L
Sbjct: 211 KNIHFPESLENLERARYRFKFEELFY------FEILVALRKQ-----QLKIQKKTNLYKT 259
Query: 493 YMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLA 552
E L K L+ LP+ LT +QL + EI D++ PMNRLLQGDVG GKTVVA ++
Sbjct: 260 NTE----LLKNFLKLLPFELTQAQLKVLHEIRLDMESDRPMNRLLQGDVGSGKTVVALIS 315
Query: 553 CMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKP---KIALLTGSTPVKQSR 609
+ GSGYQAA M PTE+LA QHY+ + LL KP ++ALL G K+
Sbjct: 316 MLIAAGSGYQAALMAPTEILADQHYKKISGLL--------KPLGIEVALLIGGQKKKERE 367
Query: 610 MIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSS 669
D+++G ++IGTH++I + VEF L L ++DEQ RFGV+QR + +K
Sbjct: 368 RFLDDIKSGKAKIIIGTHAIIEDNVEFDKLGLVVIDEQHRFGVLQRSQLINK-------- 419
Query: 670 GMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYI 729
+ P +L M+ATPIPRTL++ LYGD+ ++ I ++P R P+KT +
Sbjct: 420 ---------------GLNPDILIMTATPIPRTLSMTLYGDLDVSVIDEMPANRKPVKT-V 463
Query: 730 IEGNEK 735
+ G K
Sbjct: 464 LRGESK 469
>gi|398378733|ref|ZP_10536889.1| ATP-dependent DNA helicase RecG [Rhizobium sp. AP16]
gi|397724385|gb|EJK84856.1| ATP-dependent DNA helicase RecG [Rhizobium sp. AP16]
Length = 700
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 149/443 (33%), Positives = 222/443 (50%), Gaps = 80/443 (18%)
Query: 310 KIYLHLKK------FFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKV-----RAMRSNNHY 358
+++LH + FFRG + +E + + E V VSGKV R + Y
Sbjct: 91 RVFLHDETGELGLVFFRGK-------AQWLEKQLPIDETVTVSGKVDWFNGRPSMVHPDY 143
Query: 359 EMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKE 418
MRE + +L L P+YP GL LR T+ AL LP + +
Sbjct: 144 IMRE------NEAQNLPLVE-----PVYPLTAGLALKFLRKTVEAALARLPQLPEWDDEA 192
Query: 419 ITQEFGLLCLFDAYMGIHQPKHIDEADL-----ARKRLIFDEFFYLQLGRLYQMLEGLGT 473
+ Q+ G + D++ +H P+ D AD+ AR+RL +DEF QL
Sbjct: 193 LAQKQGFPSISDSFHMLHAPR--DAADIDPQAPARRRLAYDEFLAGQLSLA--------- 241
Query: 474 QFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPM 533
L + R ++ + +++K+L +LP+SLT+SQ +AI++I+ D+ M
Sbjct: 242 -------LVRQRLRKVAGQPVHPTGDISRKILESLPFSLTNSQTAAIADILKDMAGTDRM 294
Query: 534 NRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHK 593
RLLQGDVG GKT+VA +A VI SG QA M PTE+LA QHY + K +
Sbjct: 295 LRLLQGDVGAGKTLVALMAIAAVIESGGQAVLMAPTEILARQHYATIAKFAASA-----N 349
Query: 594 PKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVV 653
+ +LTG T ++ I + + +G+ ++IGTH+L + V ++ L LA+VDEQ RFGV
Sbjct: 350 LSVEVLTGRTKGRERDAILERIASGEAQIIIGTHALFQDSVSYANLMLAVVDEQHRFGVH 409
Query: 654 QRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLT 713
QR R +K ++PH+L M+ATPIPRTL LA +GDM ++
Sbjct: 410 QRLRLTAK-----------------------GISPHMLVMTATPIPRTLVLAAFGDMDVS 446
Query: 714 QITDLPPGRIPIKTYIIEGNEKG 736
++T+ P GR PI+T I G
Sbjct: 447 KLTEKPAGRKPIQTITIPTERTG 469
>gi|396584050|ref|ZP_10484550.1| putative ATP-dependent DNA helicase RecG [Actinomyces sp. ICM47]
gi|395548385|gb|EJG15657.1| putative ATP-dependent DNA helicase RecG [Actinomyces sp. ICM47]
Length = 712
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 157/524 (29%), Positives = 237/524 (45%), Gaps = 69/524 (13%)
Query: 217 LSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGC 276
L K++ L N T+ LL PR Y G + ++ G
Sbjct: 12 LPKKIAKALHNADIVTVGDLLMVAPRRY----------------YHWGRLTPLSSLREGE 55
Query: 277 SFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGK 336
+ L + G + + SG V ++ + FF ++F P IE
Sbjct: 56 DVTILAEVAGAHLVANRSGSG---VRLEVSLTDGVQYLSATFFAKSQFKLAP----IERL 108
Query: 337 HKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASL 396
G+ +GKV A R ++ + + + ED R RP PIYP G L +
Sbjct: 109 LVPGQSFLFAGKVGAYRGK--LQLTHPSFEGVDGED--IERIASRPIPIYPVTGTLTSWA 164
Query: 397 LRDTIARALQALPAN--FDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFD 454
+ + L L + D VP I + + +HQP+ ++ AR+ L F
Sbjct: 165 IARAVGMVLDHLDDSDVSDTVPAAIRERQRIGTYAQCLRRLHQPESDEDYQQARRALAFT 224
Query: 455 EFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPR-LNAAYMEGWSSLTKKLLRALPYSLT 513
E F LQ+G L + R R + A L + ++ LP++LT
Sbjct: 225 EAFVLQVG-----------------LAAQRRGARSIPALASPADVPLVDRFIQGLPFTLT 267
Query: 514 SSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLA 573
+Q A+ +I DL VPM RLLQGDVG GKTVVA +A ++V+ +G+Q AF+ PTE+LA
Sbjct: 268 DAQRGAVDQIGADLADEVPMQRLLQGDVGSGKTVVALIAFLQVVAAGHQGAFVAPTEVLA 327
Query: 574 TQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEK 633
QH L LL + +D P + LLTGST R I + + + +V+GTH+L E
Sbjct: 328 EQHTASLRALLAPLGDD--APDVRLLTGSTTPAARREIAQAMASSAPLIVVGTHALFQES 385
Query: 634 VEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAM 693
V F+ L L +VDEQ RFGV QR G+ +D + + H L M
Sbjct: 386 VRFADLALVVVDEQHRFGVEQRAVLR------------------GAREDGRGV--HELVM 425
Query: 694 SATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGY 737
+ATPIPRT+A+ ++GD+ T++ +P GR P+ TY+ + +
Sbjct: 426 TATPIPRTIAMTVFGDLDETRMGGMPAGRAPVATYLADAANAAW 469
>gi|290889928|ref|ZP_06553015.1| hypothetical protein AWRIB429_0405 [Oenococcus oeni AWRIB429]
gi|419757841|ref|ZP_14284166.1| ATP-dependent DNA helicase RecG [Oenococcus oeni AWRIB304]
gi|419857512|ref|ZP_14380218.1| ATP-dependent DNA helicase RecG [Oenococcus oeni AWRIB202]
gi|419858993|ref|ZP_14381650.1| ATP-dependent DNA helicase RecG [Oenococcus oeni DSM 20252 =
AWRIB129]
gi|421184282|ref|ZP_15641706.1| ATP-dependent DNA helicase RecG [Oenococcus oeni AWRIB318]
gi|421194491|ref|ZP_15651711.1| ATP-dependent DNA helicase RecG [Oenococcus oeni AWRIB568]
gi|421197340|ref|ZP_15654517.1| ATP-dependent DNA helicase RecG [Oenococcus oeni AWRIB576]
gi|290480538|gb|EFD89175.1| hypothetical protein AWRIB429_0405 [Oenococcus oeni AWRIB429]
gi|399905350|gb|EJN92793.1| ATP-dependent DNA helicase RecG [Oenococcus oeni AWRIB304]
gi|399967566|gb|EJO02039.1| ATP-dependent DNA helicase RecG [Oenococcus oeni AWRIB318]
gi|399975568|gb|EJO09619.1| ATP-dependent DNA helicase RecG [Oenococcus oeni AWRIB576]
gi|399977909|gb|EJO11880.1| ATP-dependent DNA helicase RecG [Oenococcus oeni AWRIB568]
gi|410497354|gb|EKP88828.1| ATP-dependent DNA helicase RecG [Oenococcus oeni DSM 20252 =
AWRIB129]
gi|410497776|gb|EKP89245.1| ATP-dependent DNA helicase RecG [Oenococcus oeni AWRIB202]
Length = 676
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 171/540 (31%), Positives = 248/540 (45%), Gaps = 101/540 (18%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNA-QIDLDDGQYFIFIGEI-- 266
I+ + G+ ++ L+ G + LL ++P Y DL++ DDGQ F G +
Sbjct: 6 SITELSGVGQKRAEILKQLGILNIEDLLTYYPFRYDDLESRLPSQTDDGQKVTFKGMVSS 65
Query: 267 ---ISSRGMKAG-CSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGT 322
IS G K +F L +G + NI
Sbjct: 66 QPTISRFGYKKSRIAFRLL---IGHD-------------NI-----------------SV 92
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+LK + ++G+ + + G A+ H ++ I + E+D SL A
Sbjct: 93 SFFNQPWLKE---QIEIGKEMAIFGTYDAV----HEALKGQRI--IHAEND-SLAA---- 138
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
IYPS ++ ++ I A D +P+ + + LL +H P
Sbjct: 139 --IYPSNQAIHQKTIQQLIENAYAKYADQINDIIPRRLMLAYRLLSRKKQIHDMHFPDSA 196
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
+ A LAR+ F+EFF Q+ RL M G +E +E S +
Sbjct: 197 ENAKLARRSAAFEEFFIFQM-RLQLMRISAGKNRGRE---------------IEYNSEIL 240
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
+ LPYSLT +Q I EI+ DLK+P+ MNRLLQGDVG GKTVVA +A + +G
Sbjct: 241 NDFIAKLPYSLTDAQKKVIQEILLDLKRPIHMNRLLQGDVGSGKTVVAAIAMLACYSAGL 300
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
QAA MVPTE+LA QH +L L + +I LLT R I DL++G+I
Sbjct: 301 QAAIMVPTEILAQQHAINLSNL---YQSAGLNLRIELLTSGLKAAARRQILADLESGEID 357
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+ +GTH+LI V F L LA++DEQ RFGV QR R
Sbjct: 358 IAVGTHALIQADVHFYNLGLAVIDEQHRFGVKQRARLR---------------------- 395
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVY 741
+Q P +LAM+ATPIPRTLA+ YG+M ++ I LP GR PI T ++ N+ ++NV+
Sbjct: 396 -EQGQNPDILAMTATPIPRTLAITAYGEMDVSTIDQLPNGRRPIITKWVKSNQ--FDNVF 452
>gi|222085971|ref|YP_002544503.1| ATP-dependent DNA helicase RecG [Agrobacterium radiobacter K84]
gi|221723419|gb|ACM26575.1| ATP-dependent DNA helicase RecG [Agrobacterium radiobacter K84]
Length = 701
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 151/453 (33%), Positives = 223/453 (49%), Gaps = 84/453 (18%)
Query: 302 NIDSGQKKKIYLHLKK------FFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKV-----R 350
N S +++LH + FFRG + +E + + E V VSGKV R
Sbjct: 84 NPRSNVPYRVFLHDETGELGLVFFRGK-------AQWLEKQLPIDETVTVSGKVDWFNGR 136
Query: 351 AMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY--PIYPSKGGLNASLLRDTIARALQAL 408
+ Y MRE A+ P P+YP GL LR T+ AL L
Sbjct: 137 PSMVHPDYIMRESE-------------AQNLPLVEPVYPLTAGLALKFLRKTVEAALARL 183
Query: 409 PANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL-----ARKRLIFDEFFYLQLGR 463
P + + + Q+ G + D++ +H P +D AD+ AR+RL +DEF QL
Sbjct: 184 PQLPEWDDEALAQKQGFPSISDSFHMLHAP--LDAADIDPQAPARRRLAYDEFLAGQLSL 241
Query: 464 LYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEI 523
L + R ++ + +++K+L +LP+SLT+SQ +AI++I
Sbjct: 242 A----------------LVRQRLRKVAGQPVHPTGDISRKILESLPFSLTNSQTAAIADI 285
Query: 524 IWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKL 583
+ D+ M RLLQGDVG GKT+VA +A VI SG QA M PTE+LA QHY + K
Sbjct: 286 LKDMAGTDRMLRLLQGDVGAGKTLVALMAIAAVIESGGQAVLMAPTEILARQHYATIAKF 345
Query: 584 LDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAI 643
+ + +LTG T ++ I + + +G+ +VIGTH+L + V ++ L LA+
Sbjct: 346 AASANL-----SVEVLTGRTKGRERDAILERIASGEAQIVIGTHALFQDSVSYANLMLAV 400
Query: 644 VDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLA 703
VDEQ RFGV QR R +K ++PH+L M+ATPIPRTL
Sbjct: 401 VDEQHRFGVHQRLRLTAK-----------------------GISPHMLVMTATPIPRTLV 437
Query: 704 LALYGDMSLTQITDLPPGRIPIKTYIIEGNEKG 736
LA +GDM ++++T+ P GR PI+T + G
Sbjct: 438 LAAFGDMDVSKLTEKPAGRKPIQTITVPTERTG 470
>gi|407010489|gb|EKE25370.1| hypothetical protein ACD_5C00189G0003 [uncultured bacterium]
Length = 722
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 180/577 (31%), Positives = 266/577 (46%), Gaps = 124/577 (21%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFIG 264
LD +S VP + K+ LE G T+ L HFP Y D + DL +G
Sbjct: 4 LDSKLSEVPRIGKKYGPILEKLGLQTIEDFLLHFPFRYEDYSERILISDLTANTTATVMG 63
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
E++ S+ ++ ++ +I C ++D G +V R F
Sbjct: 64 EVMQSKLVR---TWKKKMMITECYVSD-----GSAMV------------------RAVWF 97
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRA-----MRSNNHYEMREYNIDVLKDEDDLSLRA- 378
P++ K G+ V +SGKV SN +E LS R
Sbjct: 98 NQ-PYVSDSLTK---GKGVRLSGKVSKDIKGLFFSNPAWE--------------LSSREP 139
Query: 379 --KGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIH 436
GR PIYP GL + +R + + DP+P+ I + L L A IH
Sbjct: 140 TNTGRLVPIYPETEGLTSRFIRWQMQTLVGFADKMEDPIPENILRGLHLPNLSQALKQIH 199
Query: 437 QPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG 496
PK + E + A+KR F + + +Q+ QM++ +D ++ + + EG
Sbjct: 200 FPKSVQEYEAAQKRFSFQQMYLVQIAS--QMVK-----------MDWDKQNAVKIIFDEG 246
Query: 497 WSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEV 556
+ KK + +LP+ LT++Q A +I D+++ PMNRLL GDVG GKTVVA +A +
Sbjct: 247 F---IKKFVASLPFPLTNAQRKAAFQIFLDMEKDFPMNRLLNGDVGSGKTVVAAMAALAA 303
Query: 557 IGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPV-----KQSRMI 611
+ +Q+A M PTE+LA QH+E +LKL K IALLT S + QS +I
Sbjct: 304 SHTKFQSAIMAPTEVLARQHFESMLKLFAG-----QKINIALLTNSYQIIKVIGHQSSVI 358
Query: 612 RKD----------------------------LQTGDITLVIGTHSLIAEKVEFSALRLAI 643
+K L++G+I ++IGTH+LI E V+F L L I
Sbjct: 359 KKQNSKDDRLLMTDDKKSTSKKLLRNELLSKLKSGEINILIGTHALIQEAVKFKNLALVI 418
Query: 644 VDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLA 703
VDEQ RFGV QR K+ +N DG P PH+L+M+ATPIPRTL
Sbjct: 419 VDEQHRFGVAQRAYLQQKI---------EQIN-DGIPGK----IPHLLSMTATPIPRTLT 464
Query: 704 LALYGDMSLTQITDLPPGRIPIKTYIIE--GNEKGYE 738
LA +G+++L+ + ++P R I T II G +K Y+
Sbjct: 465 LAFFGNLNLSVLNEMPKNRKQIITEIIRTTGRQKTYD 501
>gi|342214773|ref|ZP_08707446.1| ATP-dependent DNA helicase RecG [Veillonella sp. oral taxon 780
str. F0422]
gi|341590596|gb|EGS33833.1| ATP-dependent DNA helicase RecG [Veillonella sp. oral taxon 780
str. F0422]
Length = 678
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 156/539 (28%), Positives = 258/539 (47%), Gaps = 101/539 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
+++ + + + + QL G YT+ LLH+FPRT+ D +
Sbjct: 1 MNEQLQSIKSVGPQRVKQLNKLGIYTVTGLLHYFPRTFEDRR------------------ 42
Query: 267 ISSRGMKAGCSFSFLEVIVGCE--IADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
+V CE I + +G + + + ++++ G R
Sbjct: 43 ---------------QVYTTCEAPIGEMVGVTGQVLRVSEKRPRPRMHILTVTLSDGIRQ 87
Query: 325 TSIPFLKSIEGK--HKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDED--DLSLRAKG 380
++ F K +K G+ + GK+ + Y+M ++++++ D S+
Sbjct: 88 LNLTFFNQAYKKNFYKPGQHIYAYGKIE--HAYGAYQMNTPQVEMIEEGQIIDRSI---- 141
Query: 381 RPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G+ +R I D VP+++ + + +DA+ +H P
Sbjct: 142 --VPVYGLTEGMKQWGIRVAIKNWFDHNSTLEDVVPQDVMGDKFTMSRYDAFREMHFPTS 199
Query: 441 IDEADLARKRLIFDEFFYLQLG----RLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG 496
+ ARK+L ++E + +Q+G R ++ +G G K G
Sbjct: 200 WERYQEARKQLAYEELWIMQMGLLLLRAHEQGQG-GFPMTKNG----------------- 241
Query: 497 WSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEV 556
SL +++ + LP++LT Q A+ EI D++QP M RL+QGDVG GKTVVA LA +
Sbjct: 242 --SLVERIRQGLPFTLTGDQEKALGEIAKDMEQPQAMQRLVQGDVGSGKTVVAALALAKA 299
Query: 557 IGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQ 616
+ +G+Q A M PTE+LATQH+E +L + ++ALLTGST KQ + + L+
Sbjct: 300 VENGFQGAIMAPTEILATQHFESFQELFQDA-----PIRMALLTGSTKKKQD--LYEALE 352
Query: 617 TGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNS 676
GDI +++GTH+LI ++V F L L +VDEQ RFGV QR + K +
Sbjct: 353 RGDIDVLVGTHALIQDRVIFHQLGLIVVDEQHRFGVEQRAKLQRKGDH------------ 400
Query: 677 DGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
PHVL M+ATPIPRT+ L++YGD+ ++ I ++PPGR P+KTY ++ + K
Sbjct: 401 -----------PHVLIMTATPIPRTMTLSIYGDLEVSLIKEMPPGRKPVKTYAVDSSYK 448
>gi|375309194|ref|ZP_09774475.1| ATP-dependent DNA helicase recg [Paenibacillus sp. Aloe-11]
gi|375078503|gb|EHS56730.1| ATP-dependent DNA helicase recg [Paenibacillus sp. Aloe-11]
Length = 682
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 133/394 (33%), Positives = 196/394 (49%), Gaps = 54/394 (13%)
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDE-DDLSLRAKGRPYPIYPSKGGLNASLLR 398
G + V+GK ++++ + V E D + G P+Y G + S +R
Sbjct: 108 GREIVVTGK---------WDLKRMQMTVSDSEFPDKGVARSGTLQPVYSIGGKITQSWMR 158
Query: 399 DTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFF 457
T+ + LQ + +P+ + +++ ++ A GIHQP+ E AR+R++++E F
Sbjct: 159 KTMNQTLQQFGEMIPEILPELLVRKYSMMPRKKAITGIHQPEDNREGQEARRRMVYEELF 218
Query: 458 YLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQL 517
QL K + R + ++ ++ +R+LP+ LT +Q
Sbjct: 219 LFQL---------------KMQAFRALNRGRADGVVHTVDNATVREFVRSLPFELTDAQK 263
Query: 518 SAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHY 577
EI+ DL+ P MNRLLQGDVG GKTVVA + + SG+Q A MVPTE+LA QH
Sbjct: 264 KVELEILHDLRSPYCMNRLLQGDVGSGKTVVAAIGLFATVRSGFQGALMVPTEILAEQHM 323
Query: 578 EHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFS 637
L KL + + LLTGST K+ + + LQ G + +V+GTH+LI E V F
Sbjct: 324 RSLQKLFEPF-----GISVGLLTGSTTGKKRKELLASLQMGLLDIVVGTHALIQEDVYFR 378
Query: 638 ALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATP 697
L L + DEQ RFGV QR K Y P VL M+ATP
Sbjct: 379 QLGLVVTDEQHRFGVNQRSILRRKGY-----------------------NPDVLTMTATP 415
Query: 698 IPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
IPRTLA+ +GDM ++ I++ P GRIPI TY ++
Sbjct: 416 IPRTLAITAFGDMDVSTISERPKGRIPISTYWVK 449
>gi|325955344|ref|YP_004239004.1| ATP-dependent DNA helicase RecG [Weeksella virosa DSM 16922]
gi|323437962|gb|ADX68426.1| ATP-dependent DNA helicase RecG [Weeksella virosa DSM 16922]
Length = 701
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 123/350 (35%), Positives = 193/350 (55%), Gaps = 46/350 (13%)
Query: 383 YPIYPS-----KGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQ 437
+P+YPS K G+ +++ I + Q + + + + L+ AY IH
Sbjct: 151 FPVYPSTELLAKKGITNRMMQKIILQLFQESIMIEENLSTSLVDQLKLISRAKAYAQIHF 210
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGW 497
PK+ +E A RL F+E F+ QL ++ +G Q + PR+ + +
Sbjct: 211 PKNAEELRQAEFRLKFEELFFFQLS---MFVKKIGHQQTNKS----QAFPRVGEYFNTFY 263
Query: 498 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
++ +P+ LT++Q + EI DL+Q MNRLLQGDVG GKT+VA L+ + I
Sbjct: 264 NNY-------IPFELTNAQKRVVKEIYRDLRQHKQMNRLLQGDVGSGKTMVALLSMLLAI 316
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
+ +QA + PTE+LA QHY+ +++ L +++ K+AL+TGST Q + I + L +
Sbjct: 317 DNNFQATLIAPTEILAQQHYQSVVEYLGDLD-----VKVALITGSTTKSQRQPIHEGLLS 371
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
G+I ++IGTH+++ + V+F+ L LAI+DEQ RFGV QR +F K
Sbjct: 372 GEINILIGTHAILEDTVQFNNLGLAIIDEQHRFGVAQRAKFWRK---------------- 415
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
PH+L M+ATPIPRTLA++LYGD+ ++ I +LP GR PI+T
Sbjct: 416 ------AKQPPHILVMTATPIPRTLAMSLYGDLDISVIDELPKGRKPIQT 459
>gi|418183220|ref|ZP_12819778.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA43380]
gi|353848203|gb|EHE28220.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA43380]
Length = 671
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 164/532 (30%), Positives = 254/532 (47%), Gaps = 99/532 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K K+G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIKLGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ L+ L ++ +G + + WS
Sbjct: 197 LAEYKQALRRIKFEELFYFQM-----QLQTLKSENRVQG-----------SGLVLDWSQE 240
Query: 501 TKKLLRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
++A LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +
Sbjct: 241 KVTAVKASLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTA 300
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
GYQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+
Sbjct: 301 GYQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGE 353
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 354 ADLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN- 398
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 --------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|334127462|ref|ZP_08501374.1| DNA helicase RecG [Centipeda periodontii DSM 2778]
gi|333389416|gb|EGK60581.1| DNA helicase RecG [Centipeda periodontii DSM 2778]
Length = 688
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 131/359 (36%), Positives = 189/359 (52%), Gaps = 45/359 (12%)
Query: 384 PIYPSKGGLNASLLRDTIARAL-QALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHID 442
P+Y + GL LR + AL QA + +P+ I +E+ L+ A+ IH P+ +
Sbjct: 152 PVYAATEGLTQKQLRQMMEYALAQAGGELAENLPQRIREEYHLVGRMAAFRQIHFPRREE 211
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
E AR+RL F+E + +Q G L T E+EG+ +AA E L
Sbjct: 212 ELRAARRRLAFEELYLIQCGLLALKKR---TAEEQEGIA--------HAANGE----LVA 256
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
++L ALP+ LT Q EI D++ P+PM RL+QGDVG GKT +A LA ++ + +G+Q
Sbjct: 257 RVLAALPFDLTEDQAKVWGEIARDMESPLPMRRLVQGDVGSGKTAIALLALVKTVENGHQ 316
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
A M PTE+LA QHY+ L +LL + +I LTG K+ L ++ +
Sbjct: 317 GALMAPTEILAHQHYDTLRELLTPL-----GVRIGFLTGRLAKKERTEAAAALAAHEVDI 371
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
V+GTH+LI + V F AL L + DEQ RFGV QR K T
Sbjct: 372 VVGTHALIQDGVSFDALGLVVTDEQHRFGVAQRAALEKKSVVT----------------- 414
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVY 741
P VL M+ATPIPRT+ L +YGD+ +++I LPPGR P++T++ +E E +Y
Sbjct: 415 -----PDVLVMTATPIPRTMTLTVYGDLDVSRIEHLPPGRQPVRTFL--RDETAREKIY 466
>gi|386382915|ref|ZP_10068474.1| ATP-dependent DNA helicase RecG [Streptomyces tsukubaensis
NRRL18488]
gi|385669625|gb|EIF92809.1| ATP-dependent DNA helicase RecG [Streptomyces tsukubaensis
NRRL18488]
Length = 742
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 162/551 (29%), Positives = 249/551 (45%), Gaps = 109/551 (19%)
Query: 215 PGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN----AQIDLDDGQYFIFIGEIISSR 270
P +K L QL G +T+ LLHH+PR Y + +++ LD+
Sbjct: 17 PATAKVLGEQL---GLHTVGDLLHHYPRRYEERGQLTRLSELPLDE-------------- 59
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFL 330
+V V ++AD+ V + G+ K++ L + G+ + F
Sbjct: 60 -----------DVTVVAQVADSR------VHTFNGGRGKRLELTITD---GSGRLQLVFF 99
Query: 331 KSIEGKHKV------GEFVCVSGKVRAMRSNNHYEMREY------NIDVLKDEDDLSLRA 378
G HK G +GKV Y + + D ++ +
Sbjct: 100 G--RGVHKPQSELPPGSRAMFAGKVSVFNRKLQLAHPTYAKLGADGTEAAEGADSSAVES 157
Query: 379 -KGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQ 437
G PIYP+ G+ + + + L DP+P + + G + L +A + +H+
Sbjct: 158 WAGALIPIYPACKGMESWKIAKAVDAVLPRAGEAVDPLPPALREGRGFVPLPEALLKVHR 217
Query: 438 PKHIDEADLARKRLIFDEFFYLQLG---RLYQ--MLEGLGTQFEKEGLLDKYRKPRLNAA 492
P+ + + AR RL +DE F LQ+ R Y L + + +GLL +
Sbjct: 218 PQTKADIEDARARLKWDEAFVLQVALARRRYADAQLPAVARRPAPDGLLTAFDA------ 271
Query: 493 YMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLA 552
LP++LT Q +EI DL PM+RLLQG+VG GKT+VA A
Sbjct: 272 --------------RLPFTLTEGQQKVTAEIFGDLATEHPMHRLLQGEVGSGKTLVALRA 317
Query: 553 CMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEED------KHKPKIALLTGSTPVK 606
+ V+ +G QAA + PTE+LA QH+ +++++ ++ E +H KI LLTGS V
Sbjct: 318 MLAVVDAGGQAAMLAPTEVLAQQHHRSIVEMMGDLAEGGMLGGVEHATKIVLLTGSMGVP 377
Query: 607 QSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTS 666
R DL TGD +VIGTH+LI +KV F L L +VDEQ RFGV QR SK
Sbjct: 378 ARRQALLDLVTGDAGIVIGTHALIEDKVRFHDLGLVVVDEQHRFGVEQRDALRSK----- 432
Query: 667 MSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIK 726
PH+L M+ATPIPRT+A+ ++GD+ + + LP GR PI
Sbjct: 433 -----------------GQQPPHLLVMTATPIPRTVAMTVFGDLETSVLDQLPAGRSPIA 475
Query: 727 TYIIEGNEKGY 737
++++ +K +
Sbjct: 476 SHVVPAQDKPH 486
>gi|317475642|ref|ZP_07934903.1| ATP-dependent DNA helicase RecG [Bacteroides eggerthii 1_2_48FAA]
gi|316908212|gb|EFV29905.1| ATP-dependent DNA helicase RecG [Bacteroides eggerthii 1_2_48FAA]
Length = 698
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 168/516 (32%), Positives = 246/516 (47%), Gaps = 97/516 (18%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNAQ-IDLDDGQ--YFIFIGEIISSRGMKAGCSFSFLE 282
+ G ++ LL++FP Y D I DG Y GEI+
Sbjct: 25 KELGIFSFHDLLYYFPYKYVDRSRIYYIQEIDGTMPYIQLKGEIL--------------- 69
Query: 283 VIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIE---GKHKV 339
G E T+G+ G+++++ H F GT + + + I+ GK+KV
Sbjct: 70 ---GFE------TAGE-------GRQRRLIAH---FSDGTGVVDLIWFQGIKYLIGKYKV 110
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG-RPYPIYPSK---GGLNA- 394
+ V GK N + +ID +L L A G +PY K LN+
Sbjct: 111 HQEYIVFGKPSVF--NGRINIAHPDID---PASELKLSAMGLQPYYNTTEKMKRSSLNSH 165
Query: 395 ---SLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRL 451
++++ + + + LP P + E L+ L +A M IH P D A RL
Sbjct: 166 AIEKMMKNIVRQLDEPLPETLSPA---LLAEHHLMPLTEALMNIHFPVSPDVLRKAEYRL 222
Query: 452 IFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYS 511
F+E FY+QL L ++ K D+ RK R + + + R LP+
Sbjct: 223 KFEELFYVQLNIL---------RYAK----DRQRKYR-GYVFEKVGDTFNGFYSRNLPFE 268
Query: 512 LTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTEL 571
LT++Q + EI DL MNRLLQGDVG GKT+VA ++ + + +GYQA M PTE+
Sbjct: 269 LTNAQKRVLKEIRRDLGSGRQMNRLLQGDVGSGKTLVALMSMLMALDNGYQACMMAPTEI 328
Query: 572 LATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIA 631
LA QHY+ + +LL M+ ++ LLTGS K+ I L TGD+ ++IGTH++I
Sbjct: 329 LANQHYDTIRELLYGMD-----VRVELLTGSIKGKRREAILSGLLTGDVQILIGTHAVIE 383
Query: 632 EKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVL 691
+ V F++L L ++DEQ RFGV QR R +K PH+L
Sbjct: 384 DTVNFASLGLVVIDEQHRFGVAQRARLWAK----------------------STQPPHIL 421
Query: 692 AMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
M+ATPIPRTLA+ LYGD+ ++ I +LPPGR PI T
Sbjct: 422 VMTATPIPRTLAMTLYGDLDVSVIDELPPGRKPIAT 457
>gi|256820801|ref|YP_003142080.1| ATP-dependent DNA helicase RecG [Capnocytophaga ochracea DSM 7271]
gi|256582384|gb|ACU93519.1| ATP-dependent DNA helicase RecG [Capnocytophaga ochracea DSM 7271]
Length = 704
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 129/355 (36%), Positives = 196/355 (55%), Gaps = 57/355 (16%)
Query: 384 PIYPS-----KGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQ 437
P+YPS K + ++R + + + +F + +P I L+ +A IH
Sbjct: 154 PVYPSTEKLAKRNITNRVMRQLVQTVFEEVGNSFAENLPDNILVSMNLISKQEAMRNIHF 213
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYR---KPRLNA--A 492
P + A RL F+E FY+Q+ Q ++ LL K + +P N A
Sbjct: 214 PTNQTLLTKASVRLKFEELFYIQV------------QLVRKNLLHKQKFQGQPFKNVGDA 261
Query: 493 YMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLA 552
+M ++ LP+ LT +Q + EI D+ V MNRLLQGDVG GKT+VA +
Sbjct: 262 FMNFYN-------HHLPFPLTDAQKRVLKEIRADVGSNVQMNRLLQGDVGSGKTIVALMT 314
Query: 553 CMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIR 612
+ + +G QA M PTE+LA QHY+++ +LL + +ALLTGS+ K+ +M+
Sbjct: 315 MLLAVDNGCQACLMAPTEILANQHYQNISELL-----KETGVTVALLTGSSKTKERKMLD 369
Query: 613 KDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMA 672
+ LQ+G+++++IGTH+L+ KV+F L LAI+DEQ RFGV QR SKL++ +
Sbjct: 370 EQLQSGELSILIGTHALLENKVQFRNLGLAIIDEQHRFGVEQR----SKLWHKNT----- 420
Query: 673 MVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PH+L M+ATPIPRTLA+++YGD+ ++ I +LPPGR PIKT
Sbjct: 421 -------------IPPHILVMTATPIPRTLAMSVYGDLDISIIDELPPGRKPIKT 462
>gi|167750970|ref|ZP_02423097.1| hypothetical protein EUBSIR_01955 [Eubacterium siraeum DSM 15702]
gi|167656149|gb|EDS00279.1| ATP-dependent DNA helicase RecG [Eubacterium siraeum DSM 15702]
Length = 677
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 167/534 (31%), Positives = 247/534 (46%), Gaps = 96/534 (17%)
Query: 203 IEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQ--NAQIDL-DDGQY 259
I+ + D + + G+ ++ LE G T +L H+PR Y D A DL +DG+
Sbjct: 4 IKKIPDSPVCYIKGVGEKRAKLLEKLGITTALQLAEHYPRGYIDFNETTAISDLVNDGEN 63
Query: 260 FIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFF 319
+ + I++ + + +V+V +GD ++ F
Sbjct: 64 HV-VKAIVTKKFPAYYGRINIFKVLVS-------DGTGDMLITF--------------FN 101
Query: 320 RGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAK 379
FT + K+ C GK+ + +E N V D D
Sbjct: 102 SDYSFTRL----------KLDNEYCFYGKMAG-----DFLRKEMNSPVFIDSQD-----P 141
Query: 380 GRPYPIYPSKGGLNASLLRDTIARALQ--ALPANFDPVPKEITQEFGLLCLFDAYMGIHQ 437
+ P Y G++ ++ + I L+ P + + ++ L+ +A IH
Sbjct: 142 NKLMPRYSLTTGISQGIMSNCIKNVLRDFTFPEHLSDT---LMDKYSLISYDNALRWIHF 198
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGW 497
P++ ++ D A+ RL F+E F LQLG L M K RK RL A ME
Sbjct: 199 PENKEQYDKAKYRLTFEELFLLQLG-LKSM---------------KNRKKRLAGAPMESK 242
Query: 498 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
S + +LP++LT +Q+ AISE D+++ VPMNRLLQGDVG GKT VA A
Sbjct: 243 S--IDEYYSSLPFTLTGAQIRAISECCDDMQKSVPMNRLLQGDVGSGKTAVAAGAAYFAY 300
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
+GYQ+ M PTE+LA QHY+ L K L + IALLTGS Q + IR+ +
Sbjct: 301 LNGYQSTLMAPTEILAKQHYDTLYKFLAPL-----GVTIALLTGSQTPAQKKQIRQLIAD 355
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
G I + +GT +LI + FS+L L I DEQ RFGV QR SK
Sbjct: 356 GQIDVAVGTQALIQKSTRFSSLGLVITDEQHRFGVGQRAALGSK---------------- 399
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
PHVL MSATPIPRTL + +YGD+ ++ + ++P GR+PI+TY ++
Sbjct: 400 -------GNEPHVLVMSATPIPRTLGMIIYGDLDISILDEMPKGRLPIRTYAVD 446
>gi|374316433|ref|YP_005062861.1| ATP-dependent DNA helicase RecG [Sphaerochaeta pleomorpha str.
Grapes]
gi|359352077|gb|AEV29851.1| ATP-dependent DNA helicase RecG [Sphaerochaeta pleomorpha str.
Grapes]
Length = 696
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 163/541 (30%), Positives = 258/541 (47%), Gaps = 83/541 (15%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYAD--LQNAQIDLDDGQYFIFIG 264
L IS +P + G +T LL PR + D + +A +L+DG +
Sbjct: 7 LKDSISTLPKVGPSATKCYSEMGIFTFSDLLSLSPRAWEDRSMIHALGELEDGMTANTLV 66
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
E+++ G + ++ T +++ D QK L L F R
Sbjct: 67 EVVA-------------HSYFGPKFSNKRTL---KILVKDVSQKGYGRLSLVCFGRN--- 107
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
FL E KVG + G V R + ++ + ++ D + G+ P
Sbjct: 108 ----FL---EKTLKVGHIYYLYGTVS--RHMGELQCSQFEMTPATEDGDFP-DSFGKILP 157
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
IYP KG L+ ++R + L + + +P I + LL +A H P +
Sbjct: 158 IYPLKGTLSQRIIRRDVLAILSKVDRFEEELPLSIRTKHSLLSFDEALRIWHFPPSLSSH 217
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK-- 502
D ARK L F E FYLQL + + R L +G S+ TK
Sbjct: 218 DHARKTLAFSELFYLQL-------------------VARRRNVSLARGTSQGPSTPTKLE 258
Query: 503 -KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
K + LP+ LT+ Q++ + EI DL MNRLLQGDVG GKT+VA+++ + V+ +G
Sbjct: 259 LKFIEDLPFPLTADQMTVLKEIRKDLDSEQAMNRLLQGDVGSGKTLVAWISSLHVLSTGA 318
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q AFM PTELL+ QH E +LL+ + +IA LTGS K+ +++ + + G++
Sbjct: 319 QVAFMAPTELLSRQHAESAARLLEPL-----GIRIAFLTGSVKGKERKLLLQAIAKGNVD 373
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
++IGTH+L +++V F LR I+DEQ RFGV QR +A++
Sbjct: 374 IIIGTHALFSKEVSFKNLRYVIIDEQHRFGVEQR---------------LALLQ------ 412
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVY 741
+ P +L M+ATPIPRTL+L ++G+++++ I +PP R+PI T+++ +E E +Y
Sbjct: 413 --KAEVPDLLLMTATPIPRTLSLTVFGNLNVSTIRTMPPQRVPIVTHLV--SEGSRERMY 468
Query: 742 K 742
K
Sbjct: 469 K 469
>gi|308069664|ref|YP_003871269.1| ATP-dependent DNA helicase recG [Paenibacillus polymyxa E681]
gi|305858943|gb|ADM70731.1| ATP-dependent DNA helicase recG [Paenibacillus polymyxa E681]
Length = 695
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 133/394 (33%), Positives = 196/394 (49%), Gaps = 54/394 (13%)
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDE-DDLSLRAKGRPYPIYPSKGGLNASLLR 398
G + V+GK ++++ + V E D G P+Y G + S +R
Sbjct: 121 GREIVVTGK---------WDLKRMQMTVADSEFPDKGAARSGTLQPVYSIGGKITQSWMR 171
Query: 399 DTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFF 457
T+++ LQ + +P+ + +++ ++ A GIHQP+ E AR+R++++E F
Sbjct: 172 KTMSQTLQQFGEMIPEILPELLVRKYSMMPRKQAIAGIHQPQDNREGQEARRRMVYEELF 231
Query: 458 YLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQL 517
QL K + R + ++ ++ +RALP+ LT +Q
Sbjct: 232 LFQL---------------KMQAFRALNRGRADGVVHTVDNATIREFVRALPFELTDAQK 276
Query: 518 SAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHY 577
EI+ DL+ P MNRLLQGDVG GKTVVA + + SG+Q A MVPTE+LA QH
Sbjct: 277 KVELEILHDLRSPYCMNRLLQGDVGSGKTVVAAIGLFATVRSGFQGALMVPTEILAEQHM 336
Query: 578 EHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFS 637
L KL + + LLTGST K+ + + LQ G + +V+GTH+LI E V F
Sbjct: 337 RSLHKLFEPF-----GISVGLLTGSTTGKKRKELLAALQMGLLDIVVGTHALIQEDVYFR 391
Query: 638 ALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATP 697
L L + DEQ RFGV QR K Y P VL M+ATP
Sbjct: 392 QLGLVVTDEQHRFGVNQRSVLRRKGY-----------------------NPDVLTMTATP 428
Query: 698 IPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
IPRTLA+ +GDM ++ +++ P GRIPI TY ++
Sbjct: 429 IPRTLAITAFGDMDVSTLSERPKGRIPISTYWVK 462
>gi|429746372|ref|ZP_19279725.1| ATP-dependent DNA helicase RecG [Capnocytophaga sp. oral taxon 380
str. F0488]
gi|429166321|gb|EKY08311.1| ATP-dependent DNA helicase RecG [Capnocytophaga sp. oral taxon 380
str. F0488]
Length = 704
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 162/545 (29%), Positives = 262/545 (48%), Gaps = 107/545 (19%)
Query: 204 EPLLDKCISCVPGLSKRLYHQLEN-CGFYTLRKLLHHFPRTYAD---------LQNAQID 253
E +L I+ + G+ + L+ G Y + LL+ FP Y D LQN +
Sbjct: 4 ENILHTPINYLRGVGNQRAELLKTELGIYEYQDLLNLFPNRYIDRTKFYKINELQNNNTE 63
Query: 254 LDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYL 313
+ +G+I++ R +++ G + T D+G + ++
Sbjct: 64 VQ------LVGKIVNLRTVESAHQ-------KGTRLVATFVD--------DTGAMELVW- 101
Query: 314 HLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDD 373
F+G LK + K+ E + GK+ + M +D+L++
Sbjct: 102 -----FKG--------LKWLRESLKINEPYVIFGKLNFFGGT--FSMPHPEMDLLRE--- 143
Query: 374 LSLRAKGRPYPIYPS-----KGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLC 427
+ P+YPS K + ++R + + + +F + +P I L+
Sbjct: 144 FNKAGHSSIQPVYPSTEKLAKRNITNRVMRQLVQTVFEEIGNSFAENLPDNILASMNLIS 203
Query: 428 LFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYR-- 485
+A IH P + A RL F+E FY+Q+ Q ++ LL K +
Sbjct: 204 KQEAMRNIHFPTNQTLLTKASVRLKFEELFYIQV------------QLVRKNLLHKQKFQ 251
Query: 486 -KPRLNA--AYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVG 542
+P N A+M ++ LP+ LT +Q + EI D+ MNRLLQGDVG
Sbjct: 252 GQPFKNVGDAFMNFYN-------HHLPFPLTDAQKRVLKEIRADVGSNAQMNRLLQGDVG 304
Query: 543 CGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGS 602
GKT+VA + + + +G QA M PTE+LA QHY+++ +LL + +ALLTGS
Sbjct: 305 SGKTIVALMTMLLAVDNGCQACLMAPTEILANQHYQNISELL-----KETGVTVALLTGS 359
Query: 603 TPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKL 662
+ K+ +M+ + LQ+G+++++IGTH+L+ KV+F L LAI+DEQ RFGV QR SKL
Sbjct: 360 SKTKERKMLDEQLQSGELSILIGTHALLENKVQFRNLGLAIIDEQHRFGVEQR----SKL 415
Query: 663 YYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGR 722
++ + + PH+L M+ATPIPRTLA+++YGD+ ++ I +LPPGR
Sbjct: 416 WHKNT------------------IPPHILVMTATPIPRTLAMSVYGDLDVSIIDELPPGR 457
Query: 723 IPIKT 727
PIKT
Sbjct: 458 KPIKT 462
>gi|153809138|ref|ZP_01961806.1| hypothetical protein BACCAC_03448 [Bacteroides caccae ATCC 43185]
gi|423216806|ref|ZP_17203302.1| ATP-dependent DNA helicase RecG [Bacteroides caccae CL03T12C61]
gi|149128471|gb|EDM19690.1| ATP-dependent DNA helicase RecG [Bacteroides caccae ATCC 43185]
gi|392629336|gb|EIY23343.1| ATP-dependent DNA helicase RecG [Bacteroides caccae CL03T12C61]
Length = 698
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 168/519 (32%), Positives = 248/519 (47%), Gaps = 103/519 (19%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIV 285
+ G Y+L L+++FP Y D +I EI + ++++
Sbjct: 25 KELGIYSLHDLIYYFPYKYVDRSR----------IYYIHEI--------DGNMPYIQL-- 64
Query: 286 GCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIE---GKHKVGEF 342
EI ET I G+++++ H F GT + + + I+ GK+K+ E
Sbjct: 65 KGEILGFET--------IGEGRQRRLTAH---FSDGTGVVDLVWFQGIKYILGKYKLHEE 113
Query: 343 VCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG-RPYPIYPSKGGLNASLLRDTI 401
+ GK N + ++D DDL L + G +PY Y + + S L
Sbjct: 114 YIIFGKPTVF--NGRINLAHPDVD---KTDDLKLSSVGLQPY--YNTTEKMKRSFLN--- 163
Query: 402 ARALQALPANF-----DPVPKEIT----QEFGLLCLFDAYMGIHQPKHIDEADLARKRLI 452
+ A++ + A +P+P+ ++ E L+ L +A IH P + D A+ RL
Sbjct: 164 SHAIEKMMATVILQIQEPLPETLSPKLLSEHHLMPLTEALRNIHFPTNPDLLRRAQYRLK 223
Query: 453 FDEFFYLQLGRLY----QMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRAL 508
F+E FY+QL L + G FEK G + N Y + L
Sbjct: 224 FEELFYVQLNILRYAKDRQRRYRGYIFEKVGDV-------FNTFYT-----------KNL 265
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
P+ LT +Q + EI D+ MNRLLQGDVG GKT+VA ++ + + +GYQA M P
Sbjct: 266 PFQLTGAQKRVLKEIRNDVGSGRQMNRLLQGDVGSGKTLVALMSMLLALDNGYQACMMAP 325
Query: 569 TELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHS 628
TE+LA QHYE + +LL M+ ++ LLTGS K+ I L TGD+ ++IGTH+
Sbjct: 326 TEILANQHYETIKELLFGMD-----IRVELLTGSIKGKRREAILTGLLTGDVKILIGTHA 380
Query: 629 LIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAP 688
+I + V FS+L ++DEQ RFGV QR R SK P
Sbjct: 381 VIEDTVNFSSLGFVVIDEQHRFGVAQRARLWSK----------------------NIQPP 418
Query: 689 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
HVL M+ATPIPRTLA+ LYGD+ ++ I +LPPGR PI T
Sbjct: 419 HVLVMTATPIPRTLAMTLYGDLDVSVIDELPPGRKPIAT 457
>gi|218128542|ref|ZP_03457346.1| hypothetical protein BACEGG_00112 [Bacteroides eggerthii DSM 20697]
gi|217989266|gb|EEC55580.1| ATP-dependent DNA helicase RecG [Bacteroides eggerthii DSM 20697]
Length = 698
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 168/516 (32%), Positives = 246/516 (47%), Gaps = 97/516 (18%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNAQ-IDLDDGQ--YFIFIGEIISSRGMKAGCSFSFLE 282
+ G ++ LL++FP Y D I DG Y GEI+
Sbjct: 25 KELGIFSFHDLLYYFPYKYVDRSRIYYIQEIDGTMPYIQLKGEIL--------------- 69
Query: 283 VIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIE---GKHKV 339
G E T+G+ G+++++ H F GT + + + I+ GK+KV
Sbjct: 70 ---GFE------TAGE-------GRQRRLIAH---FSDGTGVVDLIWFQGIKYLIGKYKV 110
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG-RPYPIYPSK---GGLNA- 394
+ V GK N + +ID +L L A G +PY K LN+
Sbjct: 111 HQEYIVFGKPSVF--NGRINIAHPDID---PASELKLSAMGLQPYYNTTEKMKRSSLNSH 165
Query: 395 ---SLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRL 451
++++ + + + LP P + E L+ L +A M IH P D A RL
Sbjct: 166 AIEKMMKNIVRQLDEPLPETLSPA---LLAEHHLMPLTEALMNIHFPVSPDVLRKAEYRL 222
Query: 452 IFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYS 511
F+E FY+QL L ++ K D+ RK R + + + R LP+
Sbjct: 223 KFEELFYVQLNIL---------RYAK----DRQRKYR-GYVFEKVGDTFNGFYSRNLPFE 268
Query: 512 LTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTEL 571
LT++Q + EI DL MNRLLQGDVG GKT+VA ++ + + +GYQA M PTE+
Sbjct: 269 LTNAQKRVLKEIRRDLGSGRQMNRLLQGDVGSGKTLVALMSMLMALDNGYQACMMAPTEI 328
Query: 572 LATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIA 631
LA QHY+ + +LL M+ ++ LLTGS K+ I L TGD+ ++IGTH++I
Sbjct: 329 LANQHYDTIRELLYGMD-----VRVELLTGSIKGKRREAILSGLLTGDVQILIGTHAVIE 383
Query: 632 EKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVL 691
+ V F++L L ++DEQ RFGV QR R +K PH+L
Sbjct: 384 DTVNFASLGLVVIDEQHRFGVAQRARLWAK----------------------STQPPHIL 421
Query: 692 AMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
M+ATPIPRTLA+ LYGD+ ++ I +LPPGR PI T
Sbjct: 422 VMTATPIPRTLAMTLYGDLDVSVIDELPPGRKPIAT 457
>gi|124002554|ref|ZP_01687407.1| ATP-dependent DNA helicase RecG [Microscilla marina ATCC 23134]
gi|123992383|gb|EAY31751.1| ATP-dependent DNA helicase RecG [Microscilla marina ATCC 23134]
Length = 698
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 126/334 (37%), Positives = 180/334 (53%), Gaps = 43/334 (12%)
Query: 394 ASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIF 453
+ +LR + A Q + N + + I Q + L+ DA + IH PK A RL F
Sbjct: 168 SKMLRTLLPMAYQHIEEN---LSEAILQRYRLIARRDAVVNIHFPKDQQWLKRATTRLKF 224
Query: 454 DEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLT 513
+E FY+QL L + K++K + S + + LP+ LT
Sbjct: 225 EELFYIQLKLLKE---------------QKHKKKIYQGQTFKDTSLIKDFYEKHLPFELT 269
Query: 514 SSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLA 573
+Q EI D+ MNRLLQGDVG GKT+VAF++ + IGSG QA + PTE+LA
Sbjct: 270 DAQKRVCREIYRDMASGKQMNRLLQGDVGSGKTIVAFISMLSAIGSGAQACMVAPTEILA 329
Query: 574 TQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEK 633
QHY+ L K D + I +LTGST + R++ L+ G++ +++GTH+L +K
Sbjct: 330 EQHYQGLKKFADKL-----GITIDILTGSTRTRDRRVLHARLENGNLKILVGTHALFEDK 384
Query: 634 VEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAM 693
V+F L L IVDEQ RFGV QR SKL+ ++ +++ PH+L M
Sbjct: 385 VQFDNLGLCIVDEQHRFGVEQR----SKLW----------------KRNSENLYPHILVM 424
Query: 694 SATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ATPIPRTLA+ LYGD+ ++ I +LP GR PIKT
Sbjct: 425 TATPIPRTLAMTLYGDLDVSVIDELPAGRKPIKT 458
>gi|146300684|ref|YP_001195275.1| ATP-dependent DNA helicase RecG [Flavobacterium johnsoniae UW101]
gi|146155102|gb|ABQ05956.1| ATP-dependent DNA helicase RecG [Flavobacterium johnsoniae UW101]
Length = 702
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 149/407 (36%), Positives = 212/407 (52%), Gaps = 60/407 (14%)
Query: 331 KSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKG 390
K I K+ E + + GK S + M I++L E + SLR+ +P +YPS
Sbjct: 104 KWIRESLKLNEPLVIFGKCSLYGS--QFSMAHPEIELL-SEHEKSLRSAMQP--VYPSTE 158
Query: 391 GL-NASLLRDTIARALQAL----PANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
L N + TI + ++ L A F + P + +E L+ A IH PK D
Sbjct: 159 TLTNRGISNRTINKMMEQLFIETGALFTETFPPYLLEEVKLISKRAALFNIHFPKSADAL 218
Query: 445 DLARKRLIFDEFFYLQLGRLYQML----EGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
A+ RL F+E F++QL + + L + G F K G L N Y
Sbjct: 219 AKAQFRLKFEELFFIQLQLITKNLIRKHKIKGHPFTKVGEL-------FNEFYQN----- 266
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
LP+ LT++Q I EI D+ MNRLLQGDVG GKT+V F++ + I +G
Sbjct: 267 ------HLPFDLTNAQKRVIKEIRSDMGSNAQMNRLLQGDVGSGKTIVGFMSMLLAIDNG 320
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
+QA M PTE+LA QH+ L + + + I +LTGST + R+I +DL+ G +
Sbjct: 321 FQACLMAPTEILANQHFIGLSEFANTL-----NISIKILTGSTKTSERRIIHEDLENGSL 375
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
++IGTH+L+ +KV+F L LAI+DEQ RFGV QR SKL+
Sbjct: 376 QILIGTHALLEDKVKFKNLGLAIIDEQHRFGVEQR----SKLW----------------- 414
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PHVL M+ATPIPRTLA++LYGD+ ++ I +LPPGR PI+T
Sbjct: 415 -KKNEIPPHVLVMTATPIPRTLAMSLYGDLDVSVIDELPPGRKPIQT 460
>gi|429756094|ref|ZP_19288706.1| ATP-dependent DNA helicase RecG [Capnocytophaga sp. oral taxon 324
str. F0483]
gi|429172036|gb|EKY13619.1| ATP-dependent DNA helicase RecG [Capnocytophaga sp. oral taxon 324
str. F0483]
Length = 704
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 129/355 (36%), Positives = 194/355 (54%), Gaps = 57/355 (16%)
Query: 384 PIYPS-----KGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQ 437
P+YPS K + ++R + + + +F + +P I L+ +A IH
Sbjct: 154 PVYPSTEKLAKRNITNRVIRQLVQTVFEEIGNSFAENLPDNILTSMNLISKQEAMRNIHF 213
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYR---KPRLNA--A 492
P + A RL F+E FY+Q+ Q ++ LL K + +P N A
Sbjct: 214 PTNQTLLTKASVRLKFEELFYIQV------------QLVRKNLLHKQKFQGQPFKNVGDA 261
Query: 493 YMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLA 552
+M ++ LP+SLT +Q + EI D+ MNRLLQGDVG GKT+VA +
Sbjct: 262 FMNFYN-------HHLPFSLTDAQKRVLKEIRADVGSNAQMNRLLQGDVGSGKTIVALMT 314
Query: 553 CMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIR 612
+ + +G QA M PTE+LA QHY+++ +LL +ALLTGS+ K+ +M+
Sbjct: 315 MLLAVDNGCQACLMAPTEILANQHYQNISELLKGT-----GVTVALLTGSSKTKERKMLD 369
Query: 613 KDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMA 672
+ LQ+G ++++IGTH+L+ KV+F L LAI+DEQ RFGV QR SKL++ +
Sbjct: 370 EQLQSGKLSILIGTHALLENKVQFRNLGLAIIDEQHRFGVEQR----SKLWHKNT----- 420
Query: 673 MVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PH+L M+ATPIPRTLA+++YGD+ ++ I +LPPGR PIKT
Sbjct: 421 -------------IPPHILVMTATPIPRTLAMSVYGDLDVSIIDELPPGRKPIKT 462
>gi|270292353|ref|ZP_06198564.1| ATP-dependent DNA helicase RecG [Streptococcus sp. M143]
gi|270278332|gb|EFA24178.1| ATP-dependent DNA helicase RecG [Streptococcus sp. M143]
Length = 671
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 164/533 (30%), Positives = 256/533 (48%), Gaps = 101/533 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ DL+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLDLEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L + I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQAGLVNVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWS 498
+ E A +R+ F+E FY Q+ L+ L ++ + GL+ + K ++ AA
Sbjct: 197 LAEYKQALRRIKFEELFYFQM-----QLQTLKSENRVQGSGLVLNWSKEKVTAAK----- 246
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
LP+SLT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA +
Sbjct: 247 -------ENLPFSLTPAQEKSLREILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVT 299
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+GYQAA MVPTE+LA QH+E L L ++ K+ALLTGS + R + + + G
Sbjct: 300 AGYQAALMVPTEILAEQHFESLQNLFPDL-------KLALLTGSLKAAEKREVLETIAKG 352
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+ L+IGTH+LI + V+++ L L I+DEQ RFGV QR K D
Sbjct: 353 EADLIIGTHALIQDGVDYARLGLIIIDEQHRFGVGQRRVLREK--------------GDN 398
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 ---------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|198277587|ref|ZP_03210118.1| hypothetical protein BACPLE_03809 [Bacteroides plebeius DSM 17135]
gi|198270085|gb|EDY94355.1| ATP-dependent DNA helicase RecG [Bacteroides plebeius DSM 17135]
Length = 699
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 169/512 (33%), Positives = 241/512 (47%), Gaps = 88/512 (17%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNAQ-IDLDDGQ--YFIFIGEIISSRGMKAGCSFSFLE 282
+ Y+LR LL++FP Y D I DG Y G I+S G
Sbjct: 25 KELNIYSLRDLLYYFPYKYVDRSRLYYIHEIDGNMPYIQLRGRILSFEMFGEGRQ----R 80
Query: 283 VIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEF 342
+VG T G VV++ +F+G LK I GK+K E
Sbjct: 81 RLVG------HFTDGTGVVDL-------------VWFQG--------LKYITGKYKANEE 113
Query: 343 VCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG-RPYPIYPSK---GGLNASLLR 398
V GK N + +ID ++ L+L G +PY K LN+ L
Sbjct: 114 YIVFGKPTVF--NGRINVAHPDIDPAQE---LTLSTMGLQPYYNTTEKMKRTSLNSHALE 168
Query: 399 DTIARALQALPANF--DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEF 456
+ QAL + + + L+ L DA IH P++ + A+ RL F+E
Sbjct: 169 KLMKNLFQALQKESFEETLSPSLIAAHQLMPLTDALYNIHFPQNPELLRKAQYRLKFEEL 228
Query: 457 FYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLL-RALPYSLTSS 515
FY+QL L ++ KE R+ + E + LP+ LT +
Sbjct: 229 FYVQLNIL---------RYTKE------RRNKFRGLVFERVGEIFNTFYAHHLPFQLTGA 273
Query: 516 QLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQ 575
Q I E+ D+ MNRLLQGDVG GKT+VA + + + +G+QA M PTE+LATQ
Sbjct: 274 QKRVIKEMRRDMGSGRQMNRLLQGDVGSGKTLVALMTMLIALDNGFQACMMAPTEILATQ 333
Query: 576 HYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVE 635
HYE + + L+ M ++ LLTG+ K+ I +DL TGD+ ++IGTH++I + V
Sbjct: 334 HYETIRRFLNGM-----PVRVELLTGNVKGKRRETILRDLLTGDVHILIGTHAVIEDTVN 388
Query: 636 FSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSA 695
FS+L L ++DEQ RFGV QR + +K + P PHVL M+A
Sbjct: 389 FSSLGLVVIDEQHRFGVAQRAKLWAK---------------NTRP-------PHVLVMTA 426
Query: 696 TPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
TPIPRTLA+ LYGD+ ++ I +LPPGR PI+T
Sbjct: 427 TPIPRTLAMTLYGDLDVSVIDELPPGRKPIQT 458
>gi|418048300|ref|ZP_12686388.1| ATP-dependent DNA helicase RecG [Mycobacterium rhodesiae JS60]
gi|353193970|gb|EHB59474.1| ATP-dependent DNA helicase RecG [Mycobacterium rhodesiae JS60]
Length = 738
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 161/537 (29%), Positives = 244/537 (45%), Gaps = 98/537 (18%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNA----QIDLDDGQYFIFIGEIISSRGMKAGCSFSFL 281
E G T+ LL H+PR Y + ++ ++G++ +GEI +
Sbjct: 22 EVFGIRTVDDLLRHYPRKYIHGMSVWGEDEVPPEEGEHITLVGEIDKAE----------- 70
Query: 282 EVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKV-- 339
V + Q K+ YL + G R + F + K+++
Sbjct: 71 -------------------VRWTNRQPKREYLVIT-LGTGRRKVTATFFNAKYLKNELVK 110
Query: 340 GEFVCVSGKVRAMRSN-----------NHYEMREYNIDVLKDEDDLSLRAKGRP------ 382
G + +SG+V + N N + R + LK D S G
Sbjct: 111 GVRLMLSGEVGFFKGNMQLTHPDFLVLNSPKGRVFGSKSLKTIADTSTSQSGELAMSAFE 170
Query: 383 ---YPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPK 439
+PIYP+ L + + + + L L DP+PK + ++ GL+ A IH +
Sbjct: 171 RDFFPIYPASSKLQSWDIYACVQQVLAVLDPIADPLPKTVVEQRGLIDEGTALRDIHVAE 230
Query: 440 HIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSS 499
E + AR RL FDE +Q L Q G + + G +R L AA M+
Sbjct: 231 REPEREAARARLRFDEAVGMQWA-LAQRRHG---ELGESGPPAPHRDDGLAAALMQ---- 282
Query: 500 LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
LP+ LT+ Q + + +L PMNRLLQG+VG GKT+V+ LA ++++ +
Sbjct: 283 -------RLPFELTAGQREVLGVVTAELAATKPMNRLLQGEVGSGKTIVSVLAMLQMVDA 335
Query: 560 GYQAAFMVPTELLATQHYEHL------LKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRK 613
GYQ A + PTE+LA QH + L + + ++ ++ALLTGS Q R +R
Sbjct: 336 GYQCALLAPTEVLAAQHARSIRDVLGPLAMAGQLGGEEGATRVALLTGSMSAAQKRQVRD 395
Query: 614 DLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAM 673
++ G+ +VIGTH+L+ E VEF L +VDEQ RFGV QR R +K
Sbjct: 396 EVAAGEAGIVIGTHALLQEAVEFHRLGFVVVDEQHRFGVEQRDRLRAK------------ 443
Query: 674 VNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
DG + PH+L M+ATPIPRT+AL +YGD+ + + +LP GR PI T I
Sbjct: 444 -APDG-------LTPHLLVMTATPIPRTVALTVYGDLETSTMRELPRGRQPITTNTI 492
>gi|336415689|ref|ZP_08596028.1| ATP-dependent DNA helicase RecG [Bacteroides ovatus 3_8_47FAA]
gi|335940568|gb|EGN02435.1| ATP-dependent DNA helicase RecG [Bacteroides ovatus 3_8_47FAA]
Length = 698
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 173/532 (32%), Positives = 257/532 (48%), Gaps = 97/532 (18%)
Query: 209 KCISCV-PGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEII 267
K IS V P + L +LE Y+L L+++FP Y D +I EI
Sbjct: 10 KFISGVGPQKAAVLNKELE---IYSLHDLIYYFPYKYIDRSR----------IYYIHEI- 55
Query: 268 SSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ ++++ EI ET I G+++++ H F GT +
Sbjct: 56 -------DGNMPYIQL--KGEILGFET--------IGEGRQRRLTAH---FSDGTGVVDL 95
Query: 328 PFLKSIE---GKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG-RPY 383
+ + I+ GK+K+ E + GK N + ++D DDL L + G +PY
Sbjct: 96 VWFQGIKYILGKYKLHEEYIIFGKPTVF--NGRINVAHPDVD---KPDDLKLSSVGLQPY 150
Query: 384 PIYPSK---GGLNASLLRDTIARALQALPANFDPVPKEIT----QEFGLLCLFDAYMGIH 436
K LN+ + +A +Q + +P+P+ ++ E L+ L +A IH
Sbjct: 151 YSTTEKMKRSFLNSHAIEKMMATVIQQIQ---EPLPETLSPKLLTEHHLMPLTEALRNIH 207
Query: 437 QPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG 496
P + D A+ RL F+E FY+QL L ++ K+ R+ R E
Sbjct: 208 FPTNPDVLRRAQYRLKFEELFYVQLNIL---------RYAKD------RQKRYRGYIFEK 252
Query: 497 WSSLTKKLL-RALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
+ + LP+ LT +Q + EI D+ MNRLLQGDVG GKT+VA ++ +
Sbjct: 253 VGDVFNTFYTKNLPFQLTGAQKRVLKEIRNDVGSGRQMNRLLQGDVGSGKTLVALMSMLL 312
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
+ +GYQA M PTE+LA QHYE + +LL M+ ++ LLTGS K+ I L
Sbjct: 313 ALDNGYQACMMAPTEILANQHYETIKELLFGMD-----IRVELLTGSIKGKRREAILAGL 367
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
TGD+ ++IGTH++I + V FS+L ++DEQ RFGV QR R SK
Sbjct: 368 LTGDVQMLIGTHAVIEDTVNFSSLGFVVIDEQHRFGVAQRARLWSK-------------- 413
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ P PHVL M+ATPIPRTLA+ LYGD+ ++ I +LPPGR PI T
Sbjct: 414 -NVQP-------PHVLVMTATPIPRTLAMTLYGDLDVSVIDELPPGRKPITT 457
>gi|332654548|ref|ZP_08420291.1| ATP-dependent DNA helicase RecG [Ruminococcaceae bacterium D16]
gi|332516512|gb|EGJ46118.1| ATP-dependent DNA helicase RecG [Ruminococcaceae bacterium D16]
Length = 694
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 166/530 (31%), Positives = 242/530 (45%), Gaps = 82/530 (15%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L+ ++ PG+ +LE G +R L+ +FPR Y D + +I
Sbjct: 5 LNTPLTDFPGVGPARSAKLEKLGLTRVRDLMTYFPRDYEDRR----------------KI 48
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
S R G ++ + + G E+V + + LH+ FF +
Sbjct: 49 WSIRSAPLGVKVC-VQAMAAEHPRLSRIRKGMELVKVKAVDHAGA-LHIT-FFNQS---- 101
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
+E + GE G V S R ++ + + D G P+Y
Sbjct: 102 -----YVERAIQAGEEYVFWGVVEEQGS------RRTMVNPIFERTDRQA-VTGCILPVY 149
Query: 387 PSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
P G++ LL I A++A + + +P+ + E L ++ IH P + D
Sbjct: 150 PLTAGISNHLLCSLIRPAVEACASQMPESLPRSVRLEHELAQTEFSFRNIHFPDSPESLD 209
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLL 505
LAR+RL F+E FYL G ML K+R R +AA S ++ L
Sbjct: 210 LARRRLTFEELFYLSTG--LAML--------------KHR--RGDAAGRVVPSRPLEEFL 251
Query: 506 RALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAF 565
LP+ T +Q + E+ DL MNRL+QGDVG GKTVVA SG Q A
Sbjct: 252 SLLPFPPTQAQRRVMGEVAADLSSGRSMNRLVQGDVGSGKTVVAAWGAYLAAKSGMQTAL 311
Query: 566 MVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIG 625
M PTE+LA QH L LL+ ++ LLTGS Q + +R+ + GD+ LV+G
Sbjct: 312 MAPTEVLAQQHARSLSALLEPA-----GVRVGLLTGSFTPAQKKRLRQAIAQGDVDLVVG 366
Query: 626 THSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQH 685
TH+LI++ VEF L L + DEQ RFGV QR +K +
Sbjct: 367 THALISQDVEFHDLGLMVADEQHRFGVAQRSALAAKGH---------------------- 404
Query: 686 MAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
APHVL MSATPIPRTLAL +YGD+ ++ I LPPGR P++TY++ +++
Sbjct: 405 -APHVLVMSATPIPRTLALIIYGDLDVSVIDQLPPGRTPVETYVVHEDKR 453
>gi|383114173|ref|ZP_09934938.1| ATP-dependent DNA helicase RecG [Bacteroides sp. D2]
gi|313694118|gb|EFS30953.1| ATP-dependent DNA helicase RecG [Bacteroides sp. D2]
Length = 698
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 173/532 (32%), Positives = 257/532 (48%), Gaps = 97/532 (18%)
Query: 209 KCISCV-PGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEII 267
K IS V P + L +LE Y+L L+++FP Y D +I EI
Sbjct: 10 KFISGVGPQKAAVLNKELE---IYSLHDLIYYFPYKYIDRSR----------IYYIHEI- 55
Query: 268 SSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ ++++ EI ET I G+++++ H F GT +
Sbjct: 56 -------DGNMPYIQL--KGEILGFET--------IGEGRQRRLTAH---FSDGTGVVDL 95
Query: 328 PFLKSIE---GKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG-RPY 383
+ + I+ GK+K+ E + GK N + ++D DDL L + G +PY
Sbjct: 96 VWFQGIKYILGKYKLHEEYIIFGKPTVF--NGRINVAHPDVD---KPDDLKLSSVGLQPY 150
Query: 384 PIYPSK---GGLNASLLRDTIARALQALPANFDPVPKEIT----QEFGLLCLFDAYMGIH 436
K LN+ + +A +Q + +P+P+ ++ E L+ L +A IH
Sbjct: 151 YSTTEKMKRSFLNSHAIEKMMATVIQQIQ---EPLPETLSPKLLTEHHLMPLTEALRNIH 207
Query: 437 QPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG 496
P + D A+ RL F+E FY+QL L ++ K+ R+ R E
Sbjct: 208 FPTNPDVLRRAQYRLKFEELFYVQLNIL---------RYAKD------RQKRYRGYIFEK 252
Query: 497 WSSLTKKLL-RALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
+ + LP+ LT +Q + EI D+ MNRLLQGDVG GKT+VA ++ +
Sbjct: 253 VGDVFNTFYTKNLPFQLTGAQKRVLKEIRNDVGSGRQMNRLLQGDVGSGKTLVALMSMLL 312
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
+ +GYQA M PTE+LA QHYE + +LL M+ ++ LLTGS K+ I L
Sbjct: 313 ALDNGYQACMMAPTEILANQHYETIKELLFGMD-----IRVELLTGSIKGKRREAILSGL 367
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
TGD+ ++IGTH++I + V FS+L ++DEQ RFGV QR R SK
Sbjct: 368 LTGDVQILIGTHAVIEDTVNFSSLGFVVIDEQHRFGVAQRARLWSK-------------- 413
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ P PHVL M+ATPIPRTLA+ LYGD+ ++ I +LPPGR PI T
Sbjct: 414 -NVQP-------PHVLVMTATPIPRTLAMTLYGDLDVSVIDELPPGRKPITT 457
>gi|157150698|ref|YP_001449735.1| ATP-dependent DNA helicase RecG [Streptococcus gordonii str.
Challis substr. CH1]
gi|157075492|gb|ABV10175.1| ATP-dependent DNA helicase RecG [Streptococcus gordonii str.
Challis substr. CH1]
Length = 671
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 167/527 (31%), Positives = 255/527 (48%), Gaps = 97/527 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + +S +PG+ + + G TL+ LL +FP Y D Q+ Q+ DL+DG+ + G
Sbjct: 3 LHQPLSVLPGVGPKSAEKFAKLGIETLQDLLLYFPFRYEDFQSKQVLDLEDGEKAVISGI 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+ + ++ + F ++ ++ +K+
Sbjct: 63 VATPANVQ---YYGF--------------------------KRNRLRFSIKQGEVILAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K +VG + V GK +A S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIEVGANIAVFGKWDKAKASLTGMKL------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ L I A Q L + +P+ + + + LL +A +H PK
Sbjct: 138 -PVYRVAQGISQISLIKLIKTAFDQGLDLLIEENLPQVLLERYHLLSRAEAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ Q+L+ + T+ GL+ +++ +L +
Sbjct: 197 LAEYKQALRRVKFEELFYFQMQ--LQVLK-METKDVSNGLVLDWQEEQLQEKKSQ----- 248
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
LP+ LT +Q A++EI+ DLK P MNRLLQGDVG GKTVVA LA V +G
Sbjct: 249 -------LPFPLTGAQERALAEILSDLKSPAHMNRLLQGDVGSGKTVVAGLAMYAVYTAG 301
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQ+A MVPTE+LA QH+E L +L ++ K+ALLTGS + + ++ G +
Sbjct: 302 YQSALMVPTEILAEQHFESLSQLFPDL-------KLALLTGSMKTAERKETLLAIELGQV 354
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+LI + V++ L L IVDEQ RFGV QR K D
Sbjct: 355 DMVIGTHALIQDGVQYHRLGLVIVDEQHRFGVAQRRILREK--------------GDN-- 398
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T
Sbjct: 399 -------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIIT 438
>gi|444415045|ref|ZP_21211291.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae PNI0199]
gi|444280728|gb|ELU86083.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae PNI0199]
Length = 671
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 162/533 (30%), Positives = 256/533 (48%), Gaps = 101/533 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQLLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWS 498
+ E A +R+ F+E FY Q+ L+ L ++ + GL+ + + ++ A +
Sbjct: 197 LAEYKQALRRIKFEELFYFQM-----QLQTLKSENRVQGSGLVLNWSQEKVTAVKV---- 247
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
+LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA +
Sbjct: 248 --------SLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVT 299
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+GYQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G
Sbjct: 300 AGYQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKG 352
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+ L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 353 EADLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN 398
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 ---------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|340620514|ref|YP_004738967.1| ATP-dependent DNA helicase RecG [Zobellia galactanivorans]
gi|339735311|emb|CAZ98688.1| ATP-dependent DNA helicase RecG [Zobellia galactanivorans]
Length = 701
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 164/514 (31%), Positives = 254/514 (49%), Gaps = 96/514 (18%)
Query: 228 CGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGC 287
G +T + LL+ FP Y +D +Y+ IG++ ++ + +V
Sbjct: 28 LGIHTFQDLLNLFPNRY---------IDKTRYYK-IGQL-----QRSNADVQIIGKVV-- 70
Query: 288 EIADTETTSGDEVVNI---DSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVC 344
I E G +V ++G+ + ++ +K+ R + P++
Sbjct: 71 HIKTVEQKKGKRLVASFVDETGEMELVWFRGQKWIRENLKLNTPYV-------------- 116
Query: 345 VSGKVRAMRSNNHYEMREYNIDVLKD-EDDLSLRAKGRPYPIYPSKGGLN-ASLLRDTIA 402
+ GK N + M +++LKD E L + + P+YPS LN + I+
Sbjct: 117 IFGKCNWF--NGKFSMPHPEMELLKDHEQGLKVLMQ----PVYPSTEKLNNKGITNRVIS 170
Query: 403 RALQAL----PANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFF 457
+ +Q + F + + +++ E L+ +A IH PK+ + A+ RL F+E F
Sbjct: 171 KLVQQIFIETKGKFTETLSEKLMFELKLIPKSEALFNIHFPKNQELLAKAQFRLKFEELF 230
Query: 458 YLQLGRLYQ-MLEGL---GTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLT 513
Y+QL + + ML G F++ G+L N Y LP+ LT
Sbjct: 231 YIQLQLIAKNMLHKQKIKGFNFDQVGVL-------FNDFYKN-----------HLPFELT 272
Query: 514 SSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLA 573
+Q I EI DL MNRLLQGDVG GKT+VA + + I +G+QA M PTE+LA
Sbjct: 273 GAQKRVIKEIRADLGSNAQMNRLLQGDVGSGKTIVAVMTMLLAIDNGFQACLMAPTEILA 332
Query: 574 TQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEK 633
QHY +++LL+ + ALLTGS R I + L++G++ ++IGTH+L+ +K
Sbjct: 333 NQHYTGIVELLEGTGIN-----CALLTGSVKQAHRRPIHEKLESGELNIIIGTHALLEDK 387
Query: 634 VEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAM 693
V+F L LAIVDEQ RFGV QR SKL++ + + PH+L M
Sbjct: 388 VKFKNLGLAIVDEQHRFGVAQR----SKLWHKN------------------QIPPHILIM 425
Query: 694 SATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ATPIPRTLA++LYGD+ ++ I +LPPGR PIKT
Sbjct: 426 TATPIPRTLAMSLYGDLDVSIIDELPPGRKPIKT 459
>gi|403383377|ref|ZP_10925434.1| ATP-dependent DNA helicase RecG [Kurthia sp. JC30]
Length = 682
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 133/352 (37%), Positives = 189/352 (53%), Gaps = 44/352 (12%)
Query: 384 PIYPSKGGLNASLLRDTIARAL-QALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHID 442
P+Y +G LN R I +AL + A D +P+++ ++ LL + +A GIH PK
Sbjct: 143 PVYSLRGKLNQKKYRSFIRQALDECGEAVKDVLPEQLRTQYQLLPMHEALEGIHFPKSAA 202
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
A AR+R +++EF QL Q + + + +++GL Y RL A +
Sbjct: 203 HAKQARRRFVYEEFLVFQLK--MQAIRKVRKE-DEQGLAIHYDVERLRAFFA-------- 251
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
+LPY LT +Q ++EI DL P MNRLLQGDVG GKTVVA A + +GYQ
Sbjct: 252 ----SLPYDLTGAQKRVVNEICKDLLTPQRMNRLLQGDVGSGKTVVAASALYAAVTAGYQ 307
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
A M PTE+LA QH E+L L M+ ++ LL+GST K R I DL +G+I +
Sbjct: 308 GALMAPTEILAEQHLENLRAWLQEMD-----VRVELLSGSTRPKARREILADLASGEIDI 362
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
+IGTH+LI V FS L L I DEQ RFGV QR
Sbjct: 363 LIGTHALIQPNVIFSKLGLVITDEQHRFGVNQRRVLR----------------------- 399
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
D+ +P L M+ATPIPRTL++ +G+M ++ I ++P GR PI+T+ ++ +
Sbjct: 400 DKGESPDQLFMTATPIPRTLSITAFGEMDVSIIDEMPAGRKPIETHWMKAEQ 451
>gi|302525016|ref|ZP_07277358.1| ATP-dependent DNA helicase RecG [Streptomyces sp. AA4]
gi|302433911|gb|EFL05727.1| ATP-dependent DNA helicase RecG [Streptomyces sp. AA4]
Length = 717
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 155/523 (29%), Positives = 252/523 (48%), Gaps = 79/523 (15%)
Query: 232 TLRKLLHHFPRTYADLQN----AQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGC 287
T+ LL H+PR YA+ A ++L + + E IS R MK+ + + L+++
Sbjct: 28 TVSDLLRHYPRRYAERGELTDIAGLELGEHATVLARIEKISKRRMKS-RNGTILDMV--- 83
Query: 288 EIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSG 347
I G+++ + +R E + G+ +G
Sbjct: 84 ---------------ITDGKRRLACAFFNQAWR-------------EKELAPGKTGLFAG 115
Query: 348 KVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQA 407
KV A R EY + + E + P+YP+ G+ + + + L
Sbjct: 116 KVTAFRDTLQLANPEYELLDAEREAEAVDNFLAEIIPVYPAAQGMPTWSIAKCVRQVLDV 175
Query: 408 LPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQM 467
L DP+P+++ + GL L A GIH+P+ + +R RL +DE +QL
Sbjct: 176 LEVGEDPMPEDLRKRHGLPGLERALRGIHRPEDWAHLESSRHRLKWDEAMAVQL------ 229
Query: 468 LEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDL 527
+ Q + +P + +++G L + LP+ LT+ Q + EI DL
Sbjct: 230 ---IFAQRRHSAV----SRPAKASPHVDG--GLLDAFDKRLPFDLTAGQRAIGDEIAADL 280
Query: 528 KQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNM 587
PMNRLLQG+VG GKTVVA A ++V+ SG QAA + PTE+LA QH L ++L ++
Sbjct: 281 STEHPMNRLLQGEVGSGKTVVALRAMLQVVDSGRQAAMLAPTEVLAAQHARSLREMLGDL 340
Query: 588 EE------DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRL 641
++ +I LLTGS K+ + + +G+ +V+GTH+LI + V+F+ L L
Sbjct: 341 GRAGELGAAENATRITLLTGSMGAKERKKALLETVSGEAGIVVGTHALIQDTVQFADLGL 400
Query: 642 AIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRT 701
+VDEQ RFGV QR S+ +D + +PHVL M+ATPIPRT
Sbjct: 401 VVVDEQHRFGVEQRDALRSR-------------GADST-------SPHVLVMTATPIPRT 440
Query: 702 LALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK--GYENVYK 742
+A+ +YGD+ ++ + ++P GR PIKT ++ EK ++ V++
Sbjct: 441 VAMTVYGDLEISALREMPVGRSPIKTTVVPVAEKPAWFDRVWQ 483
>gi|262408219|ref|ZP_06084766.1| ATP-dependent DNA helicase RecG [Bacteroides sp. 2_1_22]
gi|294646288|ref|ZP_06723940.1| ATP-dependent DNA helicase RecG [Bacteroides ovatus SD CC 2a]
gi|294806775|ref|ZP_06765602.1| ATP-dependent DNA helicase RecG [Bacteroides xylanisolvens SD CC
1b]
gi|345510221|ref|ZP_08789789.1| ATP-dependent DNA helicase RecG [Bacteroides sp. D1]
gi|229445551|gb|EEO51342.1| ATP-dependent DNA helicase RecG [Bacteroides sp. D1]
gi|262353771|gb|EEZ02864.1| ATP-dependent DNA helicase RecG [Bacteroides sp. 2_1_22]
gi|292638369|gb|EFF56735.1| ATP-dependent DNA helicase RecG [Bacteroides ovatus SD CC 2a]
gi|294446057|gb|EFG14697.1| ATP-dependent DNA helicase RecG [Bacteroides xylanisolvens SD CC
1b]
Length = 698
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 173/532 (32%), Positives = 257/532 (48%), Gaps = 97/532 (18%)
Query: 209 KCISCV-PGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEII 267
K IS V P + L +LE Y+L L+++FP Y D +I EI
Sbjct: 10 KFISGVGPQKAAVLNKELE---IYSLHDLIYYFPYKYIDRSR----------IYYIHEI- 55
Query: 268 SSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ ++++ EI ET I G+++++ H F GT +
Sbjct: 56 -------DGNMPYIQL--KGEILGFET--------IGEGRQRRLTAH---FSDGTGVVDL 95
Query: 328 PFLKSIE---GKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG-RPY 383
+ + I+ GK+K+ E + GK N + ++D DDL L + G +PY
Sbjct: 96 VWFQGIKYILGKYKLHEEYIIFGKPTVF--NGRINVAHPDVD---KPDDLKLSSVGLQPY 150
Query: 384 PIYPSK---GGLNASLLRDTIARALQALPANFDPVPKEIT----QEFGLLCLFDAYMGIH 436
K LN+ + +A +Q + +P+P+ ++ E L+ L +A IH
Sbjct: 151 YSTTEKMKRSFLNSHAIEKMMATVIQQIQ---EPLPETLSPKLLTEHHLMPLTEALRNIH 207
Query: 437 QPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG 496
P + D A+ RL F+E FY+QL L ++ K+ R+ R E
Sbjct: 208 FPTNPDVLRRAQYRLKFEELFYVQLNIL---------RYAKD------RQKRYRGYIFEK 252
Query: 497 WSSLTKKLL-RALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
+ + LP+ LT +Q + EI D+ MNRLLQGDVG GKT+VA ++ +
Sbjct: 253 VGDVFNTFYAKNLPFQLTGAQKRVLKEIRNDVGSGRQMNRLLQGDVGSGKTLVALMSMLL 312
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
+ +GYQA M PTE+LA QHYE + +LL M+ ++ LLTGS K+ I L
Sbjct: 313 ALDNGYQACMMAPTEILANQHYETIKELLFGMD-----IRVELLTGSIKGKRREAILAGL 367
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
TGD+ ++IGTH++I + V FS+L ++DEQ RFGV QR R SK
Sbjct: 368 LTGDVQILIGTHAVIEDTVNFSSLGFVVIDEQHRFGVAQRARLWSK-------------- 413
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ P PHVL M+ATPIPRTLA+ LYGD+ ++ I +LPPGR PI T
Sbjct: 414 -NVQP-------PHVLVMTATPIPRTLAMTLYGDLDVSVIDELPPGRKPITT 457
>gi|94971548|ref|YP_593596.1| ATP-dependent DNA helicase RecG [Candidatus Koribacter versatilis
Ellin345]
gi|94553598|gb|ABF43522.1| ATP-dependent DNA helicase RecG [Candidatus Koribacter versatilis
Ellin345]
Length = 753
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 180/541 (33%), Positives = 245/541 (45%), Gaps = 92/541 (17%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L + V G+ R L G T+ LL++ P Y D N + IGE
Sbjct: 39 LSTSVQYVKGIGPRTAETLATKGISTVEDLLYYLPFRYEDRLNPR----------GIGE- 87
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
++ G S V+ + T + + GQ + L +F G
Sbjct: 88 -----LRPGEMAS---VVAEVRTSGLFRTRAGPMFQLTVGQGHQTLKCL--WFHGA---- 133
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNI-----DVLKDEDDLSLRAK-- 379
+LK + K G+ + + GKV + + RE I +VL D D+ + A
Sbjct: 134 --YLKD---RFKPGQLLAMYGKV----EESKFGRRELQIIQPQFEVLHDPDEPAEDADSG 184
Query: 380 -------GRPYPIYPSKGG--LNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLF 429
GR PIY + G L + R I AL+ L DP+P LL
Sbjct: 185 KLKTLEIGRIVPIYETAGNGKLTSKYFRRVIYGALENLTDEIPDPIPPVTRSHVDLLERR 244
Query: 430 DAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLD--KYRKP 487
A+ H P DE + F LQ R + + + L K RK
Sbjct: 245 AAFSKAHWP---DEGE---------SFTRLQSARSAAHIRLIFEELFFLELGLELKRRKM 292
Query: 488 RLNAAY-MEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKT 546
R A + + + R LP+ T++Q + EI+ D+KQP PM RLLQGDVG GKT
Sbjct: 293 RAQAGIPFRVDDQVREAIKRILPFHPTAAQKRVLGEIVADMKQPSPMRRLLQGDVGSGKT 352
Query: 547 VVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVK 606
+VAF A + I +GYQ A M PTE+LATQHY ++L+ +I LLTGS
Sbjct: 353 IVAFEAAVIAIENGYQVALMAPTEILATQHYLSARRILEGAGY-----RIVLLTGSVEQD 407
Query: 607 QSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTS 666
+ R IR+ + G+ LVIGTH+LI E VEF AL L IVDEQ RFGV+QR +
Sbjct: 408 RKREIRRHIAQGNAQLVIGTHALIQEGVEFDALGLVIVDEQHRFGVMQRFKL-------- 459
Query: 667 MSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIK 726
M +D + P VL M+ATPIPRTLAL LYGD+ ++ + +LPPGR PI
Sbjct: 460 ------MKKTDAA-------EPDVLVMTATPIPRTLALTLYGDLDVSILNELPPGRTPIV 506
Query: 727 T 727
T
Sbjct: 507 T 507
>gi|330826895|ref|YP_004390198.1| ATP-dependent DNA helicase RecG [Alicycliphilus denitrificans K601]
gi|329312267|gb|AEB86682.1| ATP-dependent DNA helicase RecG [Alicycliphilus denitrificans K601]
Length = 705
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 137/368 (37%), Positives = 193/368 (52%), Gaps = 49/368 (13%)
Query: 384 PIYPSKGGLNASLLRDTIARAL------QALPANFDPVPKEITQEFGL---LCLFDAYMG 434
P+YP+ L + LR +A AL + LP +P E GL L ++ +
Sbjct: 143 PVYPTVAQLPQAYLRRAVASALARVDLPETLPPGLEPPLARFDSENGLHRPWGLRESLLF 202
Query: 435 IHQPKH-------IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKP 487
+H P D + A +RL +E QL +L E + R P
Sbjct: 203 LHNPAPDVALATLQDHSHPAWQRLKAEELLAQQLSQLVSKRE-----------RARLRAP 251
Query: 488 RLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTV 547
RL+ A G +L ++LL ALP+SLT++Q EI DL + VPM+RLLQGDVG GKTV
Sbjct: 252 RLSPA--PGAQALHEQLLAALPFSLTAAQRRVGEEIARDLARAVPMHRLLQGDVGSGKTV 309
Query: 548 VAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQ 607
VA LA + +G+Q A M PTE+LA QH+ L+ L + + + ++A L G K+
Sbjct: 310 VAALAAARCMDAGWQCALMAPTEILAEQHFAKLIGWLAPLLAARGR-QVAWLAGGQKKKE 368
Query: 608 SRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSM 667
+ + + +G LV+GTH++I E+V F L LA++DEQ RFGV QR KL +
Sbjct: 369 RAAMLERIASGGAALVVGTHAVIQEQVRFRNLALAVIDEQHRFGVAQRLALRQKLQH--- 425
Query: 668 SSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
DG M PH+L MSATPIPRTLA++ Y D+ ++ I +LPPGR PI T
Sbjct: 426 ---------DG-------MEPHLLMMSATPIPRTLAMSYYADLDVSTIDELPPGRTPIVT 469
Query: 728 YIIEGNEK 735
+I + K
Sbjct: 470 KLIADSRK 477
>gi|221232431|ref|YP_002511584.1| ATP-dependent DNA helicase [Streptococcus pneumoniae ATCC 700669]
gi|225855125|ref|YP_002736637.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae JJA]
gi|298229863|ref|ZP_06963544.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae str.
Canada MDR_19F]
gi|298255737|ref|ZP_06979323.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae str.
Canada MDR_19A]
gi|298503441|ref|YP_003725381.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae
TCH8431/19A]
gi|415700158|ref|ZP_11457872.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 459-5]
gi|415750083|ref|ZP_11478027.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae SV35]
gi|415752896|ref|ZP_11479878.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae SV36]
gi|417699076|ref|ZP_12348247.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA41317]
gi|418083501|ref|ZP_12720698.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA44288]
gi|418101156|ref|ZP_12738239.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 7286-06]
gi|418124019|ref|ZP_12760950.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA44378]
gi|418128563|ref|ZP_12765456.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae NP170]
gi|418137759|ref|ZP_12774597.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA11663]
gi|418164992|ref|ZP_12801660.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA17371]
gi|418178739|ref|ZP_12815322.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA41565]
gi|418196355|ref|ZP_12832831.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47688]
gi|418198524|ref|ZP_12834982.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47778]
gi|418223898|ref|ZP_12850538.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 5185-06]
gi|419425639|ref|ZP_13965835.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 7533-05]
gi|419427751|ref|ZP_13967932.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 5652-06]
gi|419436493|ref|ZP_13976580.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 8190-05]
gi|419445202|ref|ZP_13985217.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA19923]
gi|419447355|ref|ZP_13987360.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 7879-04]
gi|419450922|ref|ZP_13990908.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae EU-NP02]
gi|419453963|ref|ZP_13993933.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae EU-NP03]
gi|419473749|ref|ZP_14013598.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA13430]
gi|419476025|ref|ZP_14015861.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA14688]
gi|419506577|ref|ZP_14046238.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA49194]
gi|421287964|ref|ZP_15738727.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA58771]
gi|220674892|emb|CAR69467.1| ATP-dependent DNA helicase [Streptococcus pneumoniae ATCC 700669]
gi|225723598|gb|ACO19451.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae JJA]
gi|298239036|gb|ADI70167.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae
TCH8431/19A]
gi|332199722|gb|EGJ13797.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA41317]
gi|353754721|gb|EHD35333.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA44288]
gi|353770656|gb|EHD51168.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 7286-06]
gi|353795839|gb|EHD76185.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA44378]
gi|353799062|gb|EHD79385.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae NP170]
gi|353828824|gb|EHE08960.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA17371]
gi|353842798|gb|EHE22844.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA41565]
gi|353860366|gb|EHE40311.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47688]
gi|353861634|gb|EHE41569.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47778]
gi|353878696|gb|EHE58526.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 5185-06]
gi|353900714|gb|EHE76265.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA11663]
gi|379550913|gb|EHZ16009.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA13430]
gi|379558807|gb|EHZ23839.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA14688]
gi|379572895|gb|EHZ37852.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA19923]
gi|379608491|gb|EHZ73237.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA49194]
gi|379612932|gb|EHZ77647.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 8190-05]
gi|379614895|gb|EHZ79605.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 7879-04]
gi|379617944|gb|EHZ82624.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 5652-06]
gi|379619100|gb|EHZ83774.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 7533-05]
gi|379622627|gb|EHZ87261.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae EU-NP02]
gi|379626033|gb|EHZ90659.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae EU-NP03]
gi|381308543|gb|EIC49386.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae SV36]
gi|381314854|gb|EIC55620.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 459-5]
gi|381318377|gb|EIC59102.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae SV35]
gi|395886527|gb|EJG97543.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA58771]
Length = 671
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 162/531 (30%), Positives = 255/531 (48%), Gaps = 97/531 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ QML+ + + GL+ + + ++ A +
Sbjct: 197 LAEYKQALRRIKFEELFYFQMQ--LQMLKS-ENRVQGSGLVLNWSQEKVTAVKV------ 247
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
+LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +G
Sbjct: 248 ------SLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTAG 301
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQAA MVPTE+LA QH+E L L N+ K+ALL GS + R + + + G+
Sbjct: 302 YQAALMVPTEILAEQHFESLQNLFPNL-------KLALLIGSLKAAEKREVLETIAKGEA 354
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 355 DLIIGTHALIQDGVEYARLALIIIDEQHRFGVGQRRILREK--------------GDN-- 398
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 -------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|256004524|ref|ZP_05429503.1| ATP-dependent DNA helicase RecG [Clostridium thermocellum DSM 2360]
gi|255991529|gb|EEU01632.1| ATP-dependent DNA helicase RecG [Clostridium thermocellum DSM 2360]
Length = 689
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 173/550 (31%), Positives = 270/550 (49%), Gaps = 109/550 (19%)
Query: 201 ASIEPLLDKCISCVPGLSK---RLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLD 255
++ +L K I V G+ +L+H+L G +++ L+ HFP Y D N + L
Sbjct: 3 GDMKEILKKSIKNVKGVGDARAKLFHKL---GIFSIEDLITHFPYDYEDRSNIKKICQLT 59
Query: 256 DGQYFIFIGEIIS---SRGMKAGCSF--SFLEVIVGCEIADTETTSGDEVVNIDSGQKKK 310
+G+ F G I+S R ++ G + ++++ G IA + V + G+
Sbjct: 60 EGESCTFEGIIMSKVTERKIRQGLTLYQAYIKDDTGTIIATWYNQPYIKKV-LTVGES-- 116
Query: 311 IYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKD 370
Y+ K RG K++E ++ V E C K+
Sbjct: 117 -YIFYGKIVRG--------YKTLEVQNPVYEKAC------------------------KE 143
Query: 371 EDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLF 429
E +++ P+Y + L + +R + AL+ + N D +P + +++ L +
Sbjct: 144 EHKNTMKI----VPVYHATANLTQNTIRTVMQNALELVDGNLEDVLPLWVRKKYCLCDIN 199
Query: 430 DAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGR------LYQMLEGLGTQFEKEGLLDK 483
A+ IH P++ + AR RL+F+E F LQLG L EG+ ++ ++D
Sbjct: 200 YAFSNIHFPRNDGDIKNARYRLVFEELFLLQLGLLSVKTVLSDGKEGIAFAPNRKEMVD- 258
Query: 484 YRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGC 543
+ ++ ++LT++Q EI D++ MNRL+QGDVG
Sbjct: 259 --------------------FINSIGFTLTNAQKRVWEEIEKDMESNRVMNRLVQGDVGS 298
Query: 544 GKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGST 603
GKT+VA LA + + SGYQ A MVPTE+LA QHYE L ++ KH +ALL GS
Sbjct: 299 GKTIVAALALAKAVKSGYQGAMMVPTEILAKQHYESLKDIM-----GKHGINVALLVGSQ 353
Query: 604 PVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLY 663
KQ I +++G++ +VIGTH+LI EKV+FS L L I DEQ RFGV QR
Sbjct: 354 TKKQRSEILSKIESGEVNIVIGTHALIEEKVKFSKLGLVITDEQHRFGVRQR-------- 405
Query: 664 YTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRI 723
AM+++ G + P +L M+ATPIPRTLAL LYGD+ ++ I +LPPGR
Sbjct: 406 --------AMLSNKG-------INPDILVMTATPIPRTLALILYGDLDISIIDELPPGRK 450
Query: 724 PIKTYIIEGN 733
P+KTY ++ +
Sbjct: 451 PVKTYAVDNS 460
>gi|262282056|ref|ZP_06059825.1| ATP-dependent DNA helicase RecG [Streptococcus sp. 2_1_36FAA]
gi|262262510|gb|EEY81207.1| ATP-dependent DNA helicase RecG [Streptococcus sp. 2_1_36FAA]
Length = 671
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 164/526 (31%), Positives = 254/526 (48%), Gaps = 95/526 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + +S +PG+ + + G TL+ LL +FP Y D Q+ Q+ DL+DG+ + G
Sbjct: 3 LHQPLSVLPGVGPKSAEKFAKLGIETLQDLLLYFPFRYEDFQSKQVLDLEDGEKAVIFGI 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+ + ++ + F ++ ++ +K+
Sbjct: 63 VATPANVQ---YYGF--------------------------KRNRLRFSIKQGEVILAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY 383
F + P+L K +VG + V GK ++ + ++ +K L + K
Sbjct: 94 FFNQPYLAD---KVEVGANIAVFGK---------WDKAKASLTGMK----LLAQVKDDLQ 137
Query: 384 PIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHI 441
P+Y G++ + L I A Q L + +P+ + + + LL +A +H PK +
Sbjct: 138 PVYRVAQGISQTSLIKLIKTAFDQGLDLLIEENLPQVLLERYQLLSRAEAVRAMHFPKDL 197
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
E A +R+ F+E FY Q+ Q+L+ + T+ GL+ +++ +L +
Sbjct: 198 AEYKQALRRVKFEELFYFQMQ--LQVLK-METKDVSNGLVLDWQEEQLQEKKSQ------ 248
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
LP+ LT +Q A++EI+ DLK P MNRLLQGDVG GKTVVA LA V +GY
Sbjct: 249 ------LPFPLTGAQERALAEILSDLKSPAHMNRLLQGDVGSGKTVVAGLAMYAVHTAGY 302
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q+A MVPTE+LA QH+E L L ++ K+ALLTGS + + ++ G +
Sbjct: 303 QSALMVPTEILAEQHFESLSHLFPDL-------KLALLTGSMKAAERKETLLAIELGQVD 355
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+VIGTH+LI + V++ L L IVDEQ RFGV QR K D
Sbjct: 356 MVIGTHALIQDGVQYHHLGLVIVDEQHRFGVAQRRILREK--------------GDN--- 398
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T
Sbjct: 399 ------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIIT 438
>gi|295086530|emb|CBK68053.1| ATP-dependent DNA helicase RecG [Bacteroides xylanisolvens XB1A]
Length = 698
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 172/532 (32%), Positives = 258/532 (48%), Gaps = 97/532 (18%)
Query: 209 KCISCV-PGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEII 267
K IS V P + L +LE Y+L L+++FP Y D +I EI
Sbjct: 10 KFISGVGPQKAAVLNKELE---IYSLHDLIYYFPYKYIDRSR----------IYYIHEI- 55
Query: 268 SSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ ++++ EI ET I G+++++ H F GT +
Sbjct: 56 -------DGNMPYIQL--KGEILGFET--------IGEGRQRRLTAH---FSDGTGVVDL 95
Query: 328 PFLKSIE---GKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG-RPY 383
+ + I+ GK+K+ E + GK N + ++D +DL L + G +PY
Sbjct: 96 VWFQGIKYILGKYKLHEEYIIFGKPTVF--NGRINVAHPDVD---KPEDLKLSSVGLQPY 150
Query: 384 PIYPSK---GGLNASLLRDTIARALQALPANFDPVPKEITQ----EFGLLCLFDAYMGIH 436
K LN+ + +A +Q + +P+P+ ++ E+ L+ L +A IH
Sbjct: 151 YNTTEKMKRSFLNSHAIEKMMATVIQQIQ---EPLPETLSSKLLAEYHLMPLTEALRNIH 207
Query: 437 QPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG 496
P + D A+ RL F+E FY+QL L ++ K+ R+ R E
Sbjct: 208 FPTNPDVLRRAQYRLKFEELFYVQLNIL---------RYAKD------RQKRYRGYIFEK 252
Query: 497 WSSLTKKLL-RALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
+ + LP+ LT +Q + EI D+ MNRLLQGDVG GKT+VA ++ +
Sbjct: 253 VGDVFNTFYTKNLPFQLTGAQKRVLKEIRNDVGSGRQMNRLLQGDVGSGKTLVALMSMLL 312
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
+ +GYQA M PTE+LA QHYE + +LL M+ ++ LLTGS K+ I L
Sbjct: 313 ALDNGYQACMMAPTEILANQHYETIKELLFGMD-----IRVELLTGSIKGKRREAILTGL 367
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
TGD+ ++IGTH++I + V FS+L ++DEQ RFGV QR R SK
Sbjct: 368 LTGDVKILIGTHAVIEDTVNFSSLGFVVIDEQHRFGVAQRARLWSK-------------- 413
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ P PHVL M+ATPIPRTLA+ LYGD+ ++ I +LPPGR PI T
Sbjct: 414 -NVQP-------PHVLVMTATPIPRTLAMTLYGDLDVSVIDELPPGRKPITT 457
>gi|418185450|ref|ZP_12821991.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47283]
gi|419510960|ref|ZP_14050601.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae NP141]
gi|419530827|ref|ZP_14070353.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA40028]
gi|421213634|ref|ZP_15670588.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2070108]
gi|421215793|ref|ZP_15672714.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2070109]
gi|353848734|gb|EHE28746.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47283]
gi|379571236|gb|EHZ36194.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA40028]
gi|379631563|gb|EHZ96140.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae NP141]
gi|395578865|gb|EJG39375.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2070108]
gi|395580000|gb|EJG40495.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2070109]
Length = 671
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 162/531 (30%), Positives = 254/531 (47%), Gaps = 97/531 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGSKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ QML+ + + GL+ + + ++ A
Sbjct: 197 LAEYKQALRRIKFEELFYFQMQ--LQMLKS-ENRVQGSGLVLNWSQEKVTAVKA------ 247
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
+LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +G
Sbjct: 248 ------SLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTAG 301
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQAA MVPTE+LA QH+E L L N+ K+ LLTGS + R + + + G+
Sbjct: 302 YQAALMVPTEILAEQHFESLQNLFPNL-------KLVLLTGSLKAAEKREVLETIAKGEA 354
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 355 DLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN-- 398
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 -------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|319764638|ref|YP_004128575.1| ATP-dependent DNA helicase RecG [Alicycliphilus denitrificans BC]
gi|317119199|gb|ADV01688.1| ATP-dependent DNA helicase RecG [Alicycliphilus denitrificans BC]
Length = 705
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 137/368 (37%), Positives = 193/368 (52%), Gaps = 49/368 (13%)
Query: 384 PIYPSKGGLNASLLRDTIARAL------QALPANFDPVPKEITQEFGL---LCLFDAYMG 434
P+YP+ L + LR +A AL + LP +P E GL L ++ +
Sbjct: 143 PVYPTVAQLPQAYLRRAVASALARVDLPETLPPGLEPPLARFDSENGLHRPWGLRESLLF 202
Query: 435 IHQPKH-------IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKP 487
+H P D + A +RL +E QL +L E + R P
Sbjct: 203 LHNPAPDVALATLQDHSHPAWQRLKAEELLAQQLSQLVSKRE-----------RARLRAP 251
Query: 488 RLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTV 547
RL+ A G +L ++LL ALP+SLT++Q EI DL + VPM+RLLQGDVG GKTV
Sbjct: 252 RLSPA--PGAQALHEQLLAALPFSLTAAQRRVGEEIARDLARAVPMHRLLQGDVGSGKTV 309
Query: 548 VAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQ 607
VA LA + +G+Q A M PTE+LA QH+ L+ L + + + ++A L G K+
Sbjct: 310 VAALAAARCMDAGWQCALMAPTEILAEQHFAKLIGWLAPLLAARGQ-QVAWLAGGQKKKE 368
Query: 608 SRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSM 667
+ + + +G LV+GTH++I E+V F L LA++DEQ RFGV QR KL +
Sbjct: 369 RAAMLERIASGGAALVVGTHAVIQEQVRFRNLALAVIDEQHRFGVAQRLALRQKLQH--- 425
Query: 668 SSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
DG M PH+L MSATPIPRTLA++ Y D+ ++ I +LPPGR PI T
Sbjct: 426 ---------DG-------MEPHLLMMSATPIPRTLAMSYYADLDVSTIDELPPGRTPIVT 469
Query: 728 YIIEGNEK 735
+I + K
Sbjct: 470 KLIADSRK 477
>gi|333371205|ref|ZP_08463167.1| DNA helicase RecG [Desmospora sp. 8437]
gi|332976649|gb|EGK13490.1| DNA helicase RecG [Desmospora sp. 8437]
Length = 681
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 163/530 (30%), Positives = 247/530 (46%), Gaps = 93/530 (17%)
Query: 209 KCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIIS 268
+ ++ VPG+ + +LE G T+ LL +FP Y D + ID+ + I
Sbjct: 6 RPVTEVPGVGPKRAEELEKLGIRTVADLLGYFPYRYDDFR--VIDISEA--------IHD 55
Query: 269 SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKI--YLHLKKFFRGTRFTS 326
+ G + G + +K ++ + + G + +
Sbjct: 56 DKATLEGVLY------------------GPPSIRWYGKKKSRLTARIEVNGVHVGVVWFN 97
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY--- 383
PFL+ K K G + VSG A R + + D + +KGR
Sbjct: 98 QPFLRK---KLKPGLRIIVSGTWDAHR-----------LQLTADRSWIGDESKGRVNRME 143
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKHID 442
P+Y G + S LR TI +A A + V P+ I + + LL A +H PK D
Sbjct: 144 PVYSVTGSIQVSWLRRTIHQAFAAFGREIEEVLPEGIRRRYRLLDRAKAMYYLHFPKGRD 203
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKE-GLLDKYRKPRLNAAYMEGWSSLT 501
E AR+R++++E F +L L+ + Q E++ G+ ++ + R+ A
Sbjct: 204 EGKQARRRMVYEELFLYELRLLWHRKQ----QKERDRGIAHRFDRERVEA---------- 249
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
L+R LP+ LT +Q + EI+ D++ MNRLLQGDVG GKTVVA + SGY
Sbjct: 250 --LIRDLPFPLTGAQRRVVEEILADMEAGSRMNRLLQGDVGSGKTVVAAIILYANWLSGY 307
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q A MVPTE+LA QH L + L + + LLTGS ++ R + +Q G
Sbjct: 308 QGALMVPTEILAEQHLRSLQETLAPV-----GIHLELLTGSMTTREKRDVLSRIQMGLAD 362
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
LV+GTH+LI E V + L L I DEQ RFGV QR +++ G
Sbjct: 363 LVVGTHALIQENVHYRNLGLVITDEQHRFGVRQR----------------SILREKGE-- 404
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
+P VL M+ATPIPRTLA+ YGDM ++ I ++P GR P++T+ ++
Sbjct: 405 -----SPDVLHMTATPIPRTLAITAYGDMDISTIDEMPAGRQPVETFWVK 449
>gi|340360347|ref|ZP_08682817.1| DNA helicase RecG [Actinomyces sp. oral taxon 448 str. F0400]
gi|339883548|gb|EGQ73391.1| DNA helicase RecG [Actinomyces sp. oral taxon 448 str. F0400]
Length = 762
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 169/565 (29%), Positives = 249/565 (44%), Gaps = 72/565 (12%)
Query: 194 VGSLPSEASIE---PLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPR---TYADL 247
+G P AS PLLD+ + L KR QL G T LL PR T+ +L
Sbjct: 2 IGVSPRTASARGTVPLLDRPLDKT--LGKRTADQLAKQGVRTAGGLLRLLPRRYDTWGEL 59
Query: 248 QNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQ 307
+ + D Q + + + S G G A E T D +D
Sbjct: 60 TDLRTLADGEQATVQVRVVRSRARRTRG----------GRPPAIMEATVTDGAATMDV-- 107
Query: 308 KKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDV 367
F ++ + + G +SG+V R + I
Sbjct: 108 --------------VMFGTVGLMNHQVDQLSPGTTALMSGRVGLHRGRKQLAGPRFQI-- 151
Query: 368 LKDEDDLSLRAK-GRPYPIYPSKGGLNASLLRDTIARALQAL-PANF-DPVPKEITQEFG 424
L D D+ A RP PIYP+ L + L + L L PA+ DP+P+ + + G
Sbjct: 152 LDDLDEAEREALLARPLPIYPATEALPSWRLAKAVRTVLDQLEPADVPDPLPEHVREAHG 211
Query: 425 LLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKY 484
L+ AY IH P++ ++ LAR+R +E LQ L Q
Sbjct: 212 LVDALTAYRWIHAPENAEQWRLARRRFRHEEALVLQTA-LIQRRARHRATRTA------- 263
Query: 485 RKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCG 544
A + G SL L +LPY LT+ Q ++ L+ VPM LLQGDVG G
Sbjct: 264 -----VAWPVPGADSLRADLDASLPYELTAGQERVGRDLARALETTVPMQILLQGDVGAG 318
Query: 545 KTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEE------DKHKPKIAL 598
KT+VA A +V+G+G QAA + PTE+LA QH L LL + + ++ L
Sbjct: 319 KTLVALRAMAQVVGAGGQAALLAPTEVLAAQHQASLEALLGPLGRAGMLGGAQRATRVML 378
Query: 599 LTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRF 658
LTGSTP + R I + G+ +V+GTH+L++E V L L +VDEQ RFGV QR
Sbjct: 379 LTGSTPAARRREILTAVAGGEPAIVVGTHALLSETVRMPLLGLVVVDEQHRFGVAQRDAL 438
Query: 659 NSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDL 718
+ T ++G PH+L M+ATPIPRT+A+ ++GD+ + +L
Sbjct: 439 RERQGVTDPATGA-------------ERTPHLLVMTATPIPRTIAMTVFGDLDTAVLDEL 485
Query: 719 PPGRIPIKTYIIEGNEKGY-ENVYK 742
P GR P+ T+++ + + E +++
Sbjct: 486 PAGRRPVVTHLVPWERRSWVEGIWR 510
>gi|119953366|ref|YP_945575.1| ATP-dependent DNA helicase RecG [Borrelia turicatae 91E135]
gi|119862137|gb|AAX17905.1| ATP-dependent DNA helicase RecG [Borrelia turicatae 91E135]
Length = 689
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 167/532 (31%), Positives = 246/532 (46%), Gaps = 88/532 (16%)
Query: 214 VPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMK 273
+ GL + +L N +++L+ +FP+ Y D QN + D +
Sbjct: 15 ISGLGNKGIDRLHNLNITNIKELIEYFPKKYEDRQNIKTFPDPLEV-------------- 60
Query: 274 AGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSI 333
C + V V E + + S + I + +I+ + F RG +
Sbjct: 61 RSCEL--MTVFVVLEHRNFGSNSKKNLKIIAQSENDEIF-EILLFNRGF----------L 107
Query: 334 EGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLN 393
EG KVG+ + K + ++ +V + R K + P+Y GL
Sbjct: 108 EGVFKVGQKFYIYSKFNYSDYTQMWSCSNFDSEVFSYNPE---RFK-KIMPVYSLGEGLT 163
Query: 394 ASLLRDTIARAL-QALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLI 452
+ + + AL L +P + ++ LL L DA IH P ++ D A+K LI
Sbjct: 164 SKKISSYVKEALIYFLKFGKSDIPDFLINKYSLLSLHDALNEIHFPTSLEMLDRAKKTLI 223
Query: 453 FDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLR----AL 508
+ E F LQ + + + + ++ L LL L
Sbjct: 224 YREIFLLQF----------------------FSRGKSSLVFLRKEKHLPMNLLDQVVLKL 261
Query: 509 PYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVP 568
P+ LT Q ISEII DLK PMNRLLQGDVG GKT+VAFL+ + +I +GYQ A MVP
Sbjct: 262 PFRLTKDQEVVISEIIDDLKSNKPMNRLLQGDVGSGKTLVAFLSSIPLIEAGYQVALMVP 321
Query: 569 TELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHS 628
T+LLA QHY + L NM +D IALLTGS K + + +Q+G +LVIGTH+
Sbjct: 322 TDLLARQHYNN----LSNMLKD-FNISIALLTGSLKTKNRNDVLEKIQSGTYSLVIGTHA 376
Query: 629 LIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAP 688
+ +++ +F L I+DEQ +FGV QR + +K G D
Sbjct: 377 IFSQRTKFKKLAYVIIDEQHKFGVEQREKLKNK----------------GEEVD------ 414
Query: 689 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE-GNE-KGYE 738
+L MSATPIPR+LAL L+GD+ ++ I P GR P+ TY+ + GNE K YE
Sbjct: 415 -MLLMSATPIPRSLALTLFGDLEVSLIKRGPAGRRPVTTYLAKHGNEDKVYE 465
>gi|418202905|ref|ZP_12839334.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA52306]
gi|419456047|ref|ZP_13996004.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae EU-NP04]
gi|421285886|ref|ZP_15736662.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA60190]
gi|353867462|gb|EHE47357.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA52306]
gi|379628023|gb|EHZ92629.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae EU-NP04]
gi|395885873|gb|EJG96894.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA60190]
Length = 671
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 164/532 (30%), Positives = 256/532 (48%), Gaps = 99/532 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK---FFRGT 322
+++ ++ + F ++ ++ LK+ F T
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVT 93
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
F P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQ-PYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------ 137
Query: 382 PYPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPK 439
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 --PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPK 195
Query: 440 HIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSS 499
+ E A +R+ F+E FY Q+ QML+ + + GL+ + + ++ A +
Sbjct: 196 DLAEYKQALRRIKFEELFYFQMQ--LQMLKS-ENRVQGSGLVLNWSQEKVTAVKV----- 247
Query: 500 LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
+LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +
Sbjct: 248 -------SLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTA 300
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
GYQA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+
Sbjct: 301 GYQATLMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGE 353
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 354 ADLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN- 398
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 --------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|206895105|ref|YP_002246645.1| ATP-dependent DNA helicase RecG [Coprothermobacter proteolyticus
DSM 5265]
gi|206737722|gb|ACI16800.1| ATP-dependent DNA helicase RecG [Coprothermobacter proteolyticus
DSM 5265]
Length = 793
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 161/570 (28%), Positives = 268/570 (47%), Gaps = 106/570 (18%)
Query: 188 SSTSSEVGSLPSEASIEP--LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYA 245
S + E G+ + EP L ++ +S + G+ ++ LE T+ L+H+ P +
Sbjct: 88 SKEADEGGAGVQQRPYEPAELWEEPVSKLKGVGSKVGASLEKLDVTTVWDLIHYVPMRFV 147
Query: 246 DLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNI-- 303
D +I+ + ++ G + L +V ++ +T G ++ +
Sbjct: 148 DR----------------SKILKVKQLRTGIDATVLGTVVDVKL--QKTYRGYRLLTVTL 189
Query: 304 --DSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMR 361
D+G+ ++ + + R K + G+ V V+GKV +NH ++
Sbjct: 190 QDDTGRVDLVFFNQEFLAR---------------KFRRGQLVMVTGKV----ESNHGRLQ 230
Query: 362 EYNIDVLKDEDDLSLRAKGRPY----PIYPSKGGLNASLLRDTIARALQALPANFDPVPK 417
N+ D + G+ P+Y + G + +R I AL P
Sbjct: 231 LTNLR----SDSFEVLEPGKEILPMIPVYRAGAGTTTNTIRKVIFNALDQYSHKV-PEIF 285
Query: 418 EITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQL-----GRLYQMLEGLG 472
QE G L DA +H+P++ + + AR + + E F LQ+ ++ +G+
Sbjct: 286 PYWQEKGFLSYPDAVEKLHRPENQAQFEKARSEIAYREIFVLQVLLALRKKVIGQAQGIS 345
Query: 473 TQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVP 532
+ E++ W ++L R LP++LT++Q I EI+ D+++ P
Sbjct: 346 FRVERD------------------W---IEELERKLPFTLTNAQKRVILEILNDMQKSKP 384
Query: 533 MNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKH 592
MNRLLQGDVG GKTVVA A +G Q+A MVPTE+LA QHY ++ + ++
Sbjct: 385 MNRLLQGDVGSGKTVVAMFAMFVAAKNGKQSAVMVPTEVLAFQHY-----MVFSQWAEQF 439
Query: 593 KPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGV 652
++ LL GS + +++ L++G + +V+GTH+LI E F L L I+DEQ RFGV
Sbjct: 440 GLRVGLLVGSLSASEKSKVKRYLKSGQLDIVVGTHALIQEDTSFKDLGLVIIDEQHRFGV 499
Query: 653 VQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSL 712
QR A+++ D S + P VL MSATPIPRTL L YGD+ +
Sbjct: 500 YQRA---------------ALISMDKSKQ------PDVLVMSATPIPRTLVLTYYGDLDV 538
Query: 713 TQITDLPPGRIPIKTYIIEGNEKGYENVYK 742
+ I +LPP R P+KT+ + +EK +VY+
Sbjct: 539 SVIDELPPNRKPVKTFWV--SEKRRSSVYE 566
>gi|184200687|ref|YP_001854894.1| ATP-dependent DNA helicase RecG [Kocuria rhizophila DC2201]
gi|183580917|dbj|BAG29388.1| ATP-dependent DNA helicase RecG [Kocuria rhizophila DC2201]
Length = 753
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 182/570 (31%), Positives = 257/570 (45%), Gaps = 96/570 (16%)
Query: 188 SSTSSEVGSLPSEASIEPLLDKCIS-CVPGLSKRLYHQL--ENCGFYTLRKLLHHFPRTY 244
+S + E G LP+ A LLD+ ++ +PG S R L ++ G T+ +LL H PR Y
Sbjct: 4 ASAAGEAG-LPAFAG---LLDQPLTRWIPGTSPRSTVALLAKDLGITTVGQLLDHAPRRY 59
Query: 245 ADLQNAQ--IDLDDGQYFIFIGEIISS--RGMKAGCSFSFLEVIVGCEIADTETTSGDEV 300
Q +L G+ F+ + SS R M++ S +V+V AD
Sbjct: 60 IHRGRIQALTELVAGERTSFVARVESSSTRRMRSDPRRSLTDVVV----AD--------- 106
Query: 301 VNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEM 360
DSG + KI FF S + VG +GK R
Sbjct: 107 ---DSGAQLKI-----TFFNA---------YSAQKDLPVGSLALFTGKPEFYRGELSMTG 149
Query: 361 REYNIDVLKDEDDLSLRAKGR--PYPIYPSKGGLNASLLRDTIARALQALPANFD----- 413
+Y D S G P P+YP G L I +A+Q L D
Sbjct: 150 ADYAPVDTPDAVAGSTSESGELLPIPVYPEAGKLTTP----RIGKAVQQLLLTVDLDGLE 205
Query: 414 -PVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLG 472
P+ ++ + L L AY +H P+ ++ + A++R F E F LQ + + E
Sbjct: 206 DPLSPQLREAEDLPPLGRAYRDLHLPETVEAYERAQRRFRFQEAFVLQTELVRRRAEHAS 265
Query: 473 TQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVP 532
+ PR A + +LP+ LT Q +I +L P
Sbjct: 266 HPAD----------PRPPCA-----DGVLASFDASLPFELTPGQREVGVQISSELAGTAP 310
Query: 533 MNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEE--- 589
MNRLLQGDVG GKTVVA A ++V+ +G QAA + PTE+LATQHYE + L + E
Sbjct: 311 MNRLLQGDVGSGKTVVALRAMLQVVDNGGQAAMLAPTEVLATQHYEKITSALGPLAEPGV 370
Query: 590 ---DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDE 646
D + LLTGS V R D+ +G +V+GTH+LI E V+F+ L LA+VDE
Sbjct: 371 LGGDPRATGVTLLTGSMSVPARRKALLDIASGASGIVVGTHALIQETVQFADLGLAVVDE 430
Query: 647 QQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALAL 706
Q RFGV QR K GS APH L M+ATPIPRT+A+ +
Sbjct: 431 QHRFGVEQRDALRGKA---------------GS-------APHTLVMTATPIPRTVAMTV 468
Query: 707 YGDMSLTQITDLPPGRIPIKTYIIEGNEKG 736
+GD+ ++ + +LP GR PI T+++ E G
Sbjct: 469 FGDLDVSTLRELPGGRRPIATHVVGLAEHG 498
>gi|423212029|ref|ZP_17198558.1| ATP-dependent DNA helicase RecG [Bacteroides xylanisolvens
CL03T12C04]
gi|392695234|gb|EIY88458.1| ATP-dependent DNA helicase RecG [Bacteroides xylanisolvens
CL03T12C04]
Length = 698
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 172/532 (32%), Positives = 258/532 (48%), Gaps = 97/532 (18%)
Query: 209 KCISCV-PGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEII 267
K IS V P + L +LE Y+L L+++FP Y D +I EI
Sbjct: 10 KFISGVGPQKAAVLNKELE---IYSLHDLIYYFPYKYIDRSR----------IYYIHEI- 55
Query: 268 SSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ ++++ EI ET I G+++++ H F GT +
Sbjct: 56 -------DGNMPYIQL--KGEILGFET--------IGEGRQRRLTAH---FSDGTGVVDL 95
Query: 328 PFLKSIE---GKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG-RPY 383
+ + I+ GK+K+ E + GK N + ++D +DL L + G +PY
Sbjct: 96 VWFQGIKYILGKYKLHEEYIIFGKPTVF--NGRINVAHPDVD---KPEDLKLSSVGLQPY 150
Query: 384 PIYPSK---GGLNASLLRDTIARALQALPANFDPVPKEITQ----EFGLLCLFDAYMGIH 436
K LN+ + +A +Q + +P+P+ ++ E+ L+ L +A IH
Sbjct: 151 YNTTEKMKRSFLNSHAIEKMMATVIQQIQ---EPLPETLSSKLLAEYHLMPLTEALRNIH 207
Query: 437 QPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG 496
P + D A+ RL F+E FY+QL L ++ K+ R+ R E
Sbjct: 208 FPTNPDVLRRAQYRLKFEELFYVQLNIL---------RYAKD------RQKRYRGYIFEK 252
Query: 497 WSSLTKKLL-RALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
+ + LP+ LT +Q + EI D+ MNRLLQGDVG GKT+VA ++ +
Sbjct: 253 VGEVFNTFYTKNLPFQLTGAQKRVLKEIRNDVGSGRQMNRLLQGDVGSGKTLVALMSMLL 312
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
+ +GYQA M PTE+LA QHYE + +LL M+ ++ LLTGS K+ I L
Sbjct: 313 ALDNGYQACMMAPTEILANQHYETIKELLFGMD-----IRVELLTGSIKGKRREAILTGL 367
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
TGD+ ++IGTH++I + V FS+L ++DEQ RFGV QR R SK
Sbjct: 368 LTGDVKILIGTHAVIEDTVNFSSLGFVVIDEQHRFGVAQRARLWSK-------------- 413
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ P PHVL M+ATPIPRTLA+ LYGD+ ++ I +LPPGR PI T
Sbjct: 414 -NVQP-------PHVLVMTATPIPRTLAMTLYGDLDVSIIDELPPGRKPITT 457
>gi|222109587|ref|YP_002551851.1| ATP-dependent DNA helicase recg [Acidovorax ebreus TPSY]
gi|221729031|gb|ACM31851.1| ATP-dependent DNA helicase RecG [Acidovorax ebreus TPSY]
Length = 723
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 136/372 (36%), Positives = 193/372 (51%), Gaps = 51/372 (13%)
Query: 384 PIYPSKGGLNASLLRDTIARAL------QALPANFDP--VPKEI--TQEFGLL---CLFD 430
P+YP+ L + LR +A AL + LP +P VP + + GLL L +
Sbjct: 147 PVYPTVAQLPQAYLRRAVASALTRVELPETLPPGLEPPAVPSWVRGNGQNGLLRPWSLRE 206
Query: 431 AYMGIHQPKH-------IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDK 483
A + +H P D + A +RL +E QL +L E +
Sbjct: 207 ALLFLHHPAPDVALATLQDHSHPAWQRLKAEELLAQQLSQLTAKRE-----------RAR 255
Query: 484 YRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGC 543
R P L G + L ++LL LP+SLT++Q EI DL +PVPM+RLLQGDVG
Sbjct: 256 LRAPALRPQAQAGSTPLHEQLLGVLPFSLTAAQRRVGEEIARDLARPVPMHRLLQGDVGS 315
Query: 544 GKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGST 603
GKTVVA LA + +G+Q A M PTE+LA QH+ L+ L + + + ++A L G
Sbjct: 316 GKTVVAALAATVCMDAGWQCALMAPTEILAEQHFAKLIGWLQPLLAARGR-QVAWLVGGQ 374
Query: 604 PVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLY 663
K+ + +++G+ LV+GTH++I E+V F L LA++DEQ RFGV QR KL
Sbjct: 375 KKKERAEMLARIESGEAALVVGTHAVIQEQVRFKNLALAVIDEQHRFGVAQRLALRKKLQ 434
Query: 664 YTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRI 723
+ M PH+L MSATPIPRTLA++ Y D+ ++ I +LPPGR
Sbjct: 435 HAGME-------------------PHLLMMSATPIPRTLAMSYYADLDVSTIDELPPGRT 475
Query: 724 PIKTYIIEGNEK 735
PI T +I + K
Sbjct: 476 PIVTKLIADSRK 487
>gi|374324689|ref|YP_005077818.1| ATP-dependent DNA helicase recg [Paenibacillus terrae HPL-003]
gi|357203698|gb|AET61595.1| ATP-dependent DNA helicase recg [Paenibacillus terrae HPL-003]
Length = 682
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 132/394 (33%), Positives = 195/394 (49%), Gaps = 54/394 (13%)
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDE-DDLSLRAKGRPYPIYPSKGGLNASLLR 398
G + V+GK ++++ + V E D + G P+Y G + + +R
Sbjct: 108 GREIVVTGK---------WDLKRMQMTVSDSEFPDKGVARSGTLQPVYSVGGKITQTWMR 158
Query: 399 DTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFF 457
T+ + LQ + +P+ + +++ ++ A GIHQP+ E AR+R++++E F
Sbjct: 159 KTMNQTLQQFGEMIPEILPESLVRKYSMVPRKQAIAGIHQPQDNREGQEARRRMVYEELF 218
Query: 458 YLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQL 517
QL K + R + + ++ +RALP+ LT +Q
Sbjct: 219 LFQL---------------KMQAFRALNRGRADGVVHTVDNVTVREFVRALPFELTDAQK 263
Query: 518 SAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHY 577
EI+ DL+ P MNRLLQGDVG GKTVVA + + SG+Q A MVPTE+LA QH
Sbjct: 264 KVELEILHDLRSPYCMNRLLQGDVGSGKTVVAAIGLFATVRSGFQGALMVPTEILAEQHM 323
Query: 578 EHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFS 637
L KL + + LLTGST K+ + + LQ G + +V+GTH+LI E V F
Sbjct: 324 RSLHKLFEPF-----GISVGLLTGSTTGKKRKELLASLQMGLLDIVVGTHALIQEDVYFR 378
Query: 638 ALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATP 697
L L + DEQ RFGV QR K Y P VL M+ATP
Sbjct: 379 QLGLVVTDEQHRFGVNQRSILRRKGY-----------------------NPDVLTMTATP 415
Query: 698 IPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
IPRTLA+ +GDM ++ +++ P GRIPI TY ++
Sbjct: 416 IPRTLAITAFGDMDVSTLSERPKGRIPISTYWVK 449
>gi|88856719|ref|ZP_01131374.1| ATP-dependent DNA helicase RecG [marine actinobacterium PHSC20C1]
gi|88814016|gb|EAR23883.1| ATP-dependent DNA helicase RecG [marine actinobacterium PHSC20C1]
Length = 724
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 162/534 (30%), Positives = 241/534 (45%), Gaps = 76/534 (14%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN----AQIDLDDGQYFIF 262
LD+ +S V G Q G T+ L+ HFPR YA AQ+ LD+ +
Sbjct: 5 LDQKLSAVLGGRTATSMQ-RGLGLLTVGDLMTHFPRRYARRGELTALAQLPLDEAVTIVA 63
Query: 263 IGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGT 322
+ +R M+ S LEV +I G + +R
Sbjct: 64 EVREVRNRPMR-NKRGSILEV------------------SISDGTGILTLTFFNQAWRAN 104
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG-R 381
+ P ++ I F G+ R R H + ++ D L+ + +A +
Sbjct: 105 ELS--PGVRGI--------FAGKVGQYRGTRQLAHPDYELFDRDALELKKPEQAKAWAEQ 154
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
P PIYP+ + + ++ + L L DPVP + +E LL A +H+PK
Sbjct: 155 PIPIYPATSTVASWQIQKAVEVVLDTLGPLDDPVPDAVRRERELLPFAKALESVHRPKVD 214
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
+ AR L F E F LQ LL + +K R + A SL
Sbjct: 215 SDWRTARDALRFQEAFVLQ-----------------SALLQQRQKQRESEAIARTAGSLL 257
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
+ ALP+ LT Q + +I D+ +PVPMNRL+QG+VG GKT+VA A + V SG
Sbjct: 258 EAFDAALPFVLTGDQQTVGEQIFRDMAEPVPMNRLVQGEVGSGKTLVALRAMLAVAQSGG 317
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q+A + PTE+LA QH+ +++ L + +P I +TG P + + +G
Sbjct: 318 QSALLAPTEVLAHQHFRSIVRTLGPDLSAQLRPTI--ITGQLPTAERKKALLASVSGASR 375
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
LVIGTH+L+ + V F L L +VDEQ RFGV QR K GS
Sbjct: 376 LVIGTHALLGDAVSFVDLGLVVVDEQHRFGVDQREALRLK----------------GS-- 417
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
PHVL ++ATPIPRT+A+ ++GD+ ++ I +LP GR PI ++++ EK
Sbjct: 418 ----KPPHVLVLTATPIPRTVAMTVFGDLDISSIAELPAGRQPISSHVVPLAEK 467
>gi|291557450|emb|CBL34567.1| ATP-dependent DNA helicase RecG [Eubacterium siraeum V10Sc8a]
Length = 677
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 168/536 (31%), Positives = 251/536 (46%), Gaps = 100/536 (18%)
Query: 203 IEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQ--NAQIDL-DDGQY 259
I+ + D + + G+ ++ LE G T +L H+PR Y D A DL +DG+
Sbjct: 4 IKKIPDSPVCYIKGVGEKRAKLLEKLGITTALQLAEHYPRGYIDFNETTAISDLVNDGEN 63
Query: 260 FIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFF 319
+ + I++ + + +V+V +GD ++ F
Sbjct: 64 HV-VKAIVTKKFPAYYGRINIFKVLVS-------DGTGDMLITF--------------FN 101
Query: 320 RGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAK 379
FT + K+ C GK+ + +E N V D D
Sbjct: 102 SDYSFTRL----------KLDNEYCFYGKMAG-----DFLRKEMNSPVFIDSQD-----P 141
Query: 380 GRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQ----EFGLLCLFDAYMGI 435
+ P Y G++ ++ + I L+ P+ +T ++ L+ +A I
Sbjct: 142 NKLMPRYSLTTGISQGIMSNCIKNVLRDFT-----FPEHLTDTLMDKYNLISYDNALRWI 196
Query: 436 HQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYME 495
H P++ ++ D A+ RL F+E F LQLG L M K RK +L A ME
Sbjct: 197 HFPENKEQYDKAKYRLTFEELFLLQLG-LKSM---------------KNRKKKLAGAPME 240
Query: 496 GWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
S + +LP++LT +Q+ AISE D+++ VPMNRLLQGDVG GKT VA A
Sbjct: 241 SKS--IDEYYSSLPFTLTGAQIRAISECCDDMQKSVPMNRLLQGDVGSGKTAVAAGAAYF 298
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
+GYQ+ M PTE+LA QHY+ L K L + IALLTGS Q + IR+ +
Sbjct: 299 AYLNGYQSTLMAPTEILAKQHYDTLYKFLAPL-----GVTIALLTGSQTPAQKKQIRQLI 353
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
G I + +GT +LI + +FS+L L I DEQ RFGV QR SK
Sbjct: 354 ADGQIDVAVGTQALIQKSTKFSSLGLVITDEQHRFGVGQRAALGSK-------------- 399
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
G+ PHVL MSATPIPRTL + +YGD+ ++ + ++P GR+PI+TY ++
Sbjct: 400 --GN-------EPHVLVMSATPIPRTLGMIIYGDLDISILDEMPKGRLPIRTYAVD 446
>gi|257124969|ref|YP_003163083.1| ATP-dependent DNA helicase RecG [Leptotrichia buccalis C-1013-b]
gi|257048908|gb|ACV38092.1| ATP-dependent DNA helicase RecG [Leptotrichia buccalis C-1013-b]
Length = 689
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 165/539 (30%), Positives = 257/539 (47%), Gaps = 97/539 (17%)
Query: 214 VPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN----AQIDLDDGQYFIFIGEIIS- 268
+ G++K + G + L LL+ FPR Y + N A+I D ++ I G I++
Sbjct: 16 IKGVTKTNIPKFRKLGVFILYDLLYFFPRAYENRSNHKKIAEILAD--EFVILQGTIVNV 73
Query: 269 -SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
++ +KAG T V++ DSG + ++ + RF
Sbjct: 74 VNQYIKAG------------------RTMFRAVLSDDSGMIELVWFN-------NRFVK- 107
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLK-DEDDLSLRAKGRPYPIY 386
G H +G+ + V GKVR + + N + K ++ + + + PIY
Sbjct: 108 ------NGIH-IGDEITVYGKVRKT-----VKFQLVNPEYKKINQASFDMHEQKQILPIY 155
Query: 387 PSKGGLNASLLRDTIARALQ----ALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHID 442
PS L ++R + AL L N +PKE Q+ LL +A + IH P+ +
Sbjct: 156 PSTESLRQQVIRKVMENALMDYGYLLQEN---LPKEFLQKEKLLGRKEAVLNIHFPESEE 212
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
+ ARKR + +E L++G L +DK K N +E SL
Sbjct: 213 KQSKARKRFMLEEILLLEMGILQNRFS-----------VDKANK---NLYKLEDNKSLVS 258
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
K +++L Y LT +Q I EI +LK +NRL+QGDVG GKT+V+F+ + ++ + YQ
Sbjct: 259 KFIKSLDYELTKAQKRVIKEIYSELKAGKIVNRLIQGDVGSGKTIVSFIMLLYMVENNYQ 318
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
M PTE+LATQHY ++ N++ ++ LLT S K+ + +++ G + +
Sbjct: 319 GVIMAPTEILATQHYLGIVDEFMNLD-----IRVELLTRSVKGKKKEKLLNEIKEGLVDI 373
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
VIGTHSLI + V F L L ++DEQ RFGV QR
Sbjct: 374 VIGTHSLIEDNVIFKNLGLIVIDEQHRFGVTQRKLLR----------------------- 410
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVY 741
D+ +++ MSATPIPR+LAL +YGD+ ++ I +LP GR PIKT I+ NE + +Y
Sbjct: 411 DKGNIANLIVMSATPIPRSLALTIYGDLDVSIIDELPAGRSPIKTKWIQ-NEIDRQKMY 468
>gi|125973793|ref|YP_001037703.1| ATP-dependent DNA helicase RecG [Clostridium thermocellum ATCC
27405]
gi|281417950|ref|ZP_06248970.1| ATP-dependent DNA helicase RecG [Clostridium thermocellum JW20]
gi|385778334|ref|YP_005687499.1| ATP-dependent DNA helicase RecG [Clostridium thermocellum DSM 1313]
gi|125714018|gb|ABN52510.1| ATP-dependent DNA helicase RecG [Clostridium thermocellum ATCC
27405]
gi|281409352|gb|EFB39610.1| ATP-dependent DNA helicase RecG [Clostridium thermocellum JW20]
gi|316940014|gb|ADU74048.1| ATP-dependent DNA helicase RecG [Clostridium thermocellum DSM 1313]
Length = 694
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 173/550 (31%), Positives = 270/550 (49%), Gaps = 109/550 (19%)
Query: 201 ASIEPLLDKCISCVPGLSK---RLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLD 255
++ +L K I V G+ +L+H+L G +++ L+ HFP Y D N + L
Sbjct: 3 GDMKEILKKSIKNVKGVGDARAKLFHKL---GIFSIEDLITHFPYDYEDRSNIKKICQLT 59
Query: 256 DGQYFIFIGEIIS---SRGMKAGCSF--SFLEVIVGCEIADTETTSGDEVVNIDSGQKKK 310
+G+ F G I+S R ++ G + ++++ G IA + V + G+
Sbjct: 60 EGESCTFEGIIMSKVTERKIRQGLTLYQAYIKDDTGTIIATWYNQPYIKKV-LTVGES-- 116
Query: 311 IYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKD 370
Y+ K RG K++E ++ V E C K+
Sbjct: 117 -YIFYGKIVRG--------YKTLEVQNPVYEKAC------------------------KE 143
Query: 371 EDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLF 429
E +++ P+Y + L + +R + AL+ + N D +P + +++ L +
Sbjct: 144 EHKNTMKI----VPVYHATANLTQNTIRTVMQNALELVDGNLEDVLPLWVRKKYCLCDIN 199
Query: 430 DAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGR------LYQMLEGLGTQFEKEGLLDK 483
A+ IH P++ + AR RL+F+E F LQLG L EG+ ++ ++D
Sbjct: 200 YAFSNIHFPRNDGDIKNARYRLVFEELFLLQLGLLSVKTVLSDGKEGIAFAPNRKEMVD- 258
Query: 484 YRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGC 543
+ ++ ++LT++Q EI D++ MNRL+QGDVG
Sbjct: 259 --------------------FINSIGFTLTNAQKRVWEEIEKDMESNRVMNRLVQGDVGS 298
Query: 544 GKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGST 603
GKT+VA LA + + SGYQ A MVPTE+LA QHYE L ++ KH +ALL GS
Sbjct: 299 GKTIVAALALAKAVKSGYQGAMMVPTEILAKQHYESLKDIM-----GKHGINVALLVGSQ 353
Query: 604 PVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLY 663
KQ I +++G++ +VIGTH+LI EKV+FS L L I DEQ RFGV QR
Sbjct: 354 TKKQRSEILSKIESGEVNIVIGTHALIEEKVKFSKLGLVITDEQHRFGVRQR-------- 405
Query: 664 YTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRI 723
AM+++ G + P +L M+ATPIPRTLAL LYGD+ ++ I +LPPGR
Sbjct: 406 --------AMLSNKG-------INPDILVMTATPIPRTLALILYGDLDISIIDELPPGRK 450
Query: 724 PIKTYIIEGN 733
P+KTY ++ +
Sbjct: 451 PVKTYAVDNS 460
>gi|297559189|ref|YP_003678163.1| DEAD/DEAH box helicase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296843637|gb|ADH65657.1| DEAD/DEAH box helicase domain protein [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 747
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 146/434 (33%), Positives = 208/434 (47%), Gaps = 60/434 (13%)
Query: 313 LHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDED 372
LHL F RG+ +G G SG+V + + +Y L DED
Sbjct: 108 LHLTFFNRGSYH---------QGALVPGRLAMFSGRVSTFKGRRQLDHPQYE---LLDED 155
Query: 373 DLSLRAKGRPY-----PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLC 427
+ R Y P+YP+ GL+++ + T+ L + + DP+P E+ + GLL
Sbjct: 156 GHEGE-RARAYAEELIPVYPAVKGLDSTTIARTVDIVLADVDSLPDPLPPELRERRGLLG 214
Query: 428 LFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKP 487
+ DA IH+P + AR+RL +DE F LQL L Q + D KP
Sbjct: 215 VADALRRIHRPAEWSDVGAARRRLKWDEAFVLQLA-LAQ---------RRHRAEDLPAKP 264
Query: 488 RLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTV 547
R A L LP++LT Q + L PM+ LLQGDVG GKT+
Sbjct: 265 RPGAV-----GGLLDAFDAQLPFTLTEGQREVGERLAERLDAAHPMHCLLQGDVGAGKTL 319
Query: 548 VAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLL------DNMEEDKHKPKIALLTG 601
VA A + V+ SG QA + PTE+LA QH+ + +L ++ ++ ++ALLTG
Sbjct: 320 VALRAMLRVVDSGGQAVMLAPTEVLAQQHHRSISAMLGALGRAGQIDGAENATRVALLTG 379
Query: 602 STPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSK 661
S R D +G +V+GTH+L+ E V F+ L L +VDEQ RFGV QR K
Sbjct: 380 SMNAAARREALLDAASGAAGIVVGTHALLQEHVSFADLGLVVVDEQHRFGVEQRDALREK 439
Query: 662 LYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPG 721
DG PHVL M+ATPIPRT+A+ +YGD+ + +T LP G
Sbjct: 440 AV-------------DGR--------PHVLVMTATPIPRTVAMTVYGDLDVVALTQLPTG 478
Query: 722 RIPIKTYIIEGNEK 735
R P+ T+++ +EK
Sbjct: 479 RAPVSTHVVPASEK 492
>gi|116617652|ref|YP_818023.1| ATP-dependent DNA helicase RecG [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|116096499|gb|ABJ61650.1| ATP-dependent DNA helicase RecG [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 676
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 161/538 (29%), Positives = 247/538 (45%), Gaps = 104/538 (19%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADL-QNAQIDLDDGQYFIFIG- 264
L+ ++ +PG+ + L G +T+ L+++FP Y DL + + DG+ F G
Sbjct: 4 LNDNVNILPGVGPKRLDALHEIGIFTIEDLINYFPFRYEDLGERLPSETLDGEKATFKGI 63
Query: 265 ----EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDE---VVNIDSGQKKKIYLHLKK 317
+++ G ++ F + E + + ++ N++ GQ+ +Y
Sbjct: 64 VSTPAVVTRFGKRSQTRFGLM-----IEHENVRVSFFNQPWIAQNVEVGQEVAVY----- 113
Query: 318 FFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLR 377
G + + KV + SN E++
Sbjct: 114 -----------------GTYDAAKASLTGMKVISKASN------EFD------------- 137
Query: 378 AKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIH 436
PIYPS ++A +R I A + VP +I Q++ LL +H
Sbjct: 138 ------PIYPSSKQISAKTIRHLIEIAWADVRGTVGSLVPDKIRQKYRLLDRNTQIENMH 191
Query: 437 QPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG 496
P +++A LAR+ + F+EFF Q+ RL Q+L+ F EG+ Y LN
Sbjct: 192 FPADMEQAKLARRSIAFEEFFIFQM-RL-QLLKLADKNFSGEGI--NYDSKALN------ 241
Query: 497 WSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEV 556
K LP++LT +Q +SEI+ D K+PV MNRLLQGDVG GKTVVA +A V
Sbjct: 242 ------KFEAGLPFTLTGAQQKVVSEILTDQKRPVHMNRLLQGDVGSGKTVVAAIALYAV 295
Query: 557 IGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQ 616
+ +G QAA M PTE+LA QH +L + + D +I LLT R + +DL
Sbjct: 296 VTAGMQAALMAPTEILAQQHAINLALMFEKSGVD---IRIELLTSGMKAAARRQLLEDLA 352
Query: 617 TGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNS 676
G I +++GTH+L+ V F L LA++DEQ RFGV QR +
Sbjct: 353 DGTIDILVGTHALLQPDVMFHHLGLAVIDEQHRFGVNQRAKLR----------------- 395
Query: 677 DGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
+ + P +LAM+ATPIPRTL++ YG+M ++ I LP GR I+T I N+
Sbjct: 396 ------ENGVNPDILAMTATPIPRTLSITTYGEMDVSIIDQLPNGRKQIQTRKISHNQ 447
>gi|299148213|ref|ZP_07041275.1| ATP-dependent DNA helicase RecG [Bacteroides sp. 3_1_23]
gi|298512974|gb|EFI36861.1| ATP-dependent DNA helicase RecG [Bacteroides sp. 3_1_23]
Length = 698
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 172/532 (32%), Positives = 257/532 (48%), Gaps = 97/532 (18%)
Query: 209 KCISCV-PGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEII 267
K IS V P + L +LE Y+L L+++FP Y D +I EI
Sbjct: 10 KFISGVGPQKAAVLNKELE---IYSLHDLIYYFPYKYIDRSR----------IYYIHEI- 55
Query: 268 SSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ ++++ EI ET I G+++++ H F GT +
Sbjct: 56 -------DGNMPYIQL--KGEILGFET--------IGEGRQRRLTAH---FSDGTGVVDL 95
Query: 328 PFLKSIE---GKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG-RPY 383
+ + I+ GK+K+ E + GK N + ++D DDL L + G +PY
Sbjct: 96 VWFQGIKYILGKYKLHEEYIIFGKPTVF--NGRINVAHPDVD---KPDDLKLSSVGLQPY 150
Query: 384 PIYPSK---GGLNASLLRDTIARALQALPANFDPVPKEIT----QEFGLLCLFDAYMGIH 436
K LN+ + +A +Q + +P+P+ ++ E L+ L +A IH
Sbjct: 151 YSTTEKMKRSFLNSHAIEKMMATVIQQIQ---EPLPETLSPKLLAEHHLMPLTEALRNIH 207
Query: 437 QPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG 496
P + D A+ RL F+E FY+QL L ++ K+ R+ R E
Sbjct: 208 FPTNPDVLRRAQYRLKFEELFYVQLNIL---------RYAKD------RQKRYRGYIFEK 252
Query: 497 WSSLTKKLL-RALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
+ + LP+ LT +Q + EI D+ MNRLLQGDVG GKT+VA ++ +
Sbjct: 253 VGDVFNTFYTKNLPFQLTGAQKRVLKEIRNDVGSGRQMNRLLQGDVGSGKTLVALMSMLL 312
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
+ +GYQA M PTE+LA QHYE + +LL M+ ++ LLTGS K+ I L
Sbjct: 313 ALDNGYQACMMAPTEILANQHYETIKELLFGMD-----IRVELLTGSIKGKRREAILAGL 367
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
TGD+ ++IGTH+++ + V FS+L ++DEQ RFGV QR R SK
Sbjct: 368 LTGDVQILIGTHAVVEDTVNFSSLGFVVIDEQHRFGVAQRARLWSK-------------- 413
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ P PHVL M+ATPIPRTLA+ LYGD+ ++ I +LPPGR PI T
Sbjct: 414 -NVQP-------PHVLVMTATPIPRTLAMTLYGDLDVSVIDELPPGRKPITT 457
>gi|419722228|ref|ZP_14249376.1| ATP-dependent DNA helicase RecG [Clostridium thermocellum AD2]
gi|419724326|ref|ZP_14251394.1| ATP-dependent DNA helicase RecG [Clostridium thermocellum YS]
gi|380772332|gb|EIC06184.1| ATP-dependent DNA helicase RecG [Clostridium thermocellum YS]
gi|380781799|gb|EIC11449.1| ATP-dependent DNA helicase RecG [Clostridium thermocellum AD2]
Length = 694
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 173/546 (31%), Positives = 270/546 (49%), Gaps = 101/546 (18%)
Query: 201 ASIEPLLDKCISCVPGLSK---RLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLD 255
++ +L K I V G+ +L+H+L G +++ L+ HFP Y D N + L
Sbjct: 3 GDMKEILKKSIKNVKGVGDARAKLFHKL---GIFSIEDLITHFPYDYEDRSNIKKICQLT 59
Query: 256 DGQYFIFIGEIIS---SRGMKAGCSF--SFLEVIVGCEIADTETTSGDEVVNIDSGQKKK 310
+G+ F G I+S R ++ G + ++++ G IA + V + G+
Sbjct: 60 EGESCTFEGIIMSKVTERKIRQGLTLYQAYIKDDTGTIIATWYNQPYIKKV-LTVGES-- 116
Query: 311 IYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKD 370
Y+ K RG K++E ++ V E C K+
Sbjct: 117 -YIFYGKIVRG--------YKTLEVQNPVYEKAC------------------------KE 143
Query: 371 EDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLF 429
E +++ P+Y + L + +R + AL+ + N D +P + +++ L +
Sbjct: 144 EHKNTMKI----VPVYHATANLTQNTIRTVMQNALELVDGNLEDVLPLWVRKKYCLCDIN 199
Query: 430 DAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFE--KEGLLDKYRKP 487
A+ IH P++ + AR RL+F+E F LQ L + T KEG+
Sbjct: 200 YAFSNIHFPRNDGDIKNARYRLVFEELFLLQ-----LGLLSVKTVLSDGKEGI------- 247
Query: 488 RLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTV 547
A++ + + ++ ++LT++Q EI D++ MNRL+QGDVG GKT+
Sbjct: 248 ----AFVPNRKEMVD-FINSIGFTLTNAQKRVWEEIEKDMESNRVMNRLVQGDVGSGKTI 302
Query: 548 VAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQ 607
VA LA + + SGYQ A MVPTE+LA QHYE L ++ KH +ALL GS KQ
Sbjct: 303 VAALALAKAVKSGYQGAMMVPTEILAKQHYESLKDIM-----GKHGINVALLVGSQTKKQ 357
Query: 608 SRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSM 667
I +++G++ +VIGTH+LI EKV+FS L L I DEQ RFGV QR
Sbjct: 358 RSEILSKIESGEVNIVIGTHALIEEKVKFSKLGLVITDEQHRFGVRQR------------ 405
Query: 668 SSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
AM+++ G + P +L M+ATPIPRTLAL LYGD+ ++ I +LPPGR P+KT
Sbjct: 406 ----AMLSNKG-------INPDILVMTATPIPRTLALILYGDLDISIIDELPPGRKPVKT 454
Query: 728 YIIEGN 733
Y ++ +
Sbjct: 455 YAVDNS 460
>gi|418074518|ref|ZP_12711770.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA11184]
gi|418217138|ref|ZP_12843818.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae
Netherlands15B-37]
gi|419432070|ref|ZP_13972203.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae EU-NP05]
gi|419469495|ref|ZP_14009363.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA06083]
gi|419498061|ref|ZP_14037768.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47522]
gi|353748206|gb|EHD28860.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA11184]
gi|353870411|gb|EHE50284.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae
Netherlands15B-37]
gi|379544299|gb|EHZ09444.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA06083]
gi|379598894|gb|EHZ63679.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47522]
gi|379629151|gb|EHZ93752.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae EU-NP05]
Length = 671
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 162/533 (30%), Positives = 256/533 (48%), Gaps = 101/533 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWS 498
+ E A +R+ F+E FY Q+ L+ L ++ + GL+ + + ++ A +
Sbjct: 197 LAEYKQALRRIKFEELFYFQM-----QLQTLKSENRVQGSGLVLNWSQEKVTAVKV---- 247
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
+LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA +
Sbjct: 248 --------SLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVT 299
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+GYQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G
Sbjct: 300 AGYQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKG 352
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+ L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 353 EADLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN 398
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 ---------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|187933724|ref|YP_001885426.1| ATP-dependent DNA helicase RecG [Clostridium botulinum B str.
Eklund 17B]
gi|187721877|gb|ACD23098.1| ATP-dependent DNA helicase RecG [Clostridium botulinum B str.
Eklund 17B]
Length = 677
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 133/357 (37%), Positives = 186/357 (52%), Gaps = 47/357 (13%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
P YP KG ++ ++ I + ++ + +P ++ ++ L+ L DA IH P++ D
Sbjct: 143 PKYPLKGDISNKVIEKLINLVIDSIIIK-ENLPLDMLNKYNLISLNDAIRSIHFPENKDL 201
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
+ A RL F E F L L + + N E W + K
Sbjct: 202 LEKAIIRLKFQELFTYSLKLLLVKHKLNKNK---------------NGICFE-WDNQLKV 245
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
L +PYSLT++Q + EI+ D K PMNRL+QGDVG GKT+VA ++ VI +GYQ
Sbjct: 246 LKDNIPYSLTNAQTKVVREILRDQKSQKPMNRLVQGDVGSGKTIVALISIFNVIKNGYQC 305
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
AFM PTE+LA QHYE KL + D I +LTGSTP+K+ R I++ ++ + L+
Sbjct: 306 AFMAPTEILANQHYEESKKLFQDFNID-----IEILTGSTPLKEKRRIKEKIKQENAMLI 360
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
IGTH+L + V F+ L L I DEQ RFGV QR + +K G D
Sbjct: 361 IGTHTLFQDDVIFNKLGLIITDEQHRFGVEQRSKLINK----------------GKKAD- 403
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK--GYE 738
L M+ATPIPRTLAL LY D+ ++ I +LPPGR I T + N + GYE
Sbjct: 404 ------CLVMTATPIPRTLALYLYSDLDVSIIDELPPGRKRIDTRFYQENNRDIGYE 454
>gi|420149002|ref|ZP_14656185.1| ATP-dependent DNA helicase RecG [Capnocytophaga sp. oral taxon 335
str. F0486]
gi|394754311|gb|EJF37726.1| ATP-dependent DNA helicase RecG [Capnocytophaga sp. oral taxon 335
str. F0486]
Length = 704
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 128/355 (36%), Positives = 195/355 (54%), Gaps = 57/355 (16%)
Query: 384 PIYPS-----KGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQ 437
P+YPS K + ++R + + + +F + +P I L+ +A IH
Sbjct: 154 PVYPSTEKLAKRNITNRVMRQLVQTVFEEIGNSFAENLPDNILASMNLISKQEAMRNIHF 213
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYR---KPRLNA--A 492
P + A RL F+E FY+Q+ Q ++ LL K + +P N A
Sbjct: 214 PTNQTLLTKASVRLKFEELFYIQV------------QLVRKNLLHKQKFQGQPFKNVGDA 261
Query: 493 YMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLA 552
+M ++ LP+ LT +Q + EI D+ MNRLLQGDVG GKT+VA +
Sbjct: 262 FMNFYN-------HHLPFPLTDAQKRVLKEIRADVGSNAQMNRLLQGDVGSGKTIVALMT 314
Query: 553 CMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIR 612
+ + +G QA M PTE+LA QHY+++ +LL + +ALLTGS+ K+ +M+
Sbjct: 315 MLLAVDNGCQACLMAPTEILANQHYQNISELL-----KETGVTVALLTGSSKTKERKMLD 369
Query: 613 KDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMA 672
+ LQ+G+++++IGTH+L+ KV+F L LAI+DEQ RFGV QR SKL++ +
Sbjct: 370 EQLQSGELSILIGTHALLENKVQFRNLGLAIIDEQHRFGVEQR----SKLWHKNT----- 420
Query: 673 MVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PH+L M+ATPIPRTLA+++YGD+ ++ I +LPPGR PIKT
Sbjct: 421 -------------IPPHILVMTATPIPRTLAMSVYGDLDVSIIDELPPGRKPIKT 462
>gi|379730217|ref|YP_005322413.1| ATP-dependent DNA helicase RecG [Saprospira grandis str. Lewin]
gi|378575828|gb|AFC24829.1| ATP-dependent DNA helicase RecG [Saprospira grandis str. Lewin]
Length = 702
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 126/315 (40%), Positives = 178/315 (56%), Gaps = 40/315 (12%)
Query: 413 DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLG 472
+ +P+ + L +A +GIH PK + + D AR+R IF+E F+LQL R+ Q + L
Sbjct: 184 ETLPQYLLDSMKLPSRLEALIGIHFPKTLAQKDQARRRFIFEELFFLQL-RILQR-KSL- 240
Query: 473 TQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVP 532
Q E +G L + N Y L + LT +Q + EI DL
Sbjct: 241 KQLETKGHLFPHIGGFFNGFYQNN-----------LKFELTGAQKRVLREIRKDLGSGQQ 289
Query: 533 MNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKH 592
MNRLLQGDVG GKTVV F++ + + + +QAA M PTE+LA QH+E LLK+ + ++
Sbjct: 290 MNRLLQGDVGSGKTVVGFMSMLMALDNDFQAALMAPTEILAQQHFESLLKMAEGLD---- 345
Query: 593 KPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGV 652
+I LLTGS Q R + +DL G I ++IGTH+LI + V F L L I+DEQ RFGV
Sbjct: 346 -IRIELLTGSIKGVQRRELLEDLAEGRIHILIGTHALIEDAVVFKNLGLVIIDEQHRFGV 404
Query: 653 VQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSL 712
+QR + K N+ G PH+L M+ATPIPRTLA+ +YGD+ +
Sbjct: 405 MQRAKMWKK-------------NAAGP--------PHILVMTATPIPRTLAMTVYGDLEV 443
Query: 713 TQITDLPPGRIPIKT 727
+ I ++PPGR+PI+T
Sbjct: 444 SAIDEMPPGRLPIQT 458
>gi|194396798|ref|YP_002038308.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae G54]
gi|418121752|ref|ZP_12758695.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA44194]
gi|419491595|ref|ZP_14031333.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47179]
gi|419493821|ref|ZP_14033546.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47210]
gi|419532894|ref|ZP_14072409.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47794]
gi|421275408|ref|ZP_15726237.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA52612]
gi|194356465|gb|ACF54913.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae G54]
gi|353792588|gb|EHD72960.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA44194]
gi|379592394|gb|EHZ57210.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47210]
gi|379592957|gb|EHZ57772.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47179]
gi|379605414|gb|EHZ70165.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47794]
gi|395873372|gb|EJG84464.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA52612]
Length = 671
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 162/533 (30%), Positives = 256/533 (48%), Gaps = 101/533 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWS 498
+ E A +R+ F+E FY Q+ L+ L ++ + GL+ + + ++ A +
Sbjct: 197 LAEYKQALRRIKFEELFYFQM-----QLQTLKSENRVQGSGLVLNWSQEKVTAVKV---- 247
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
+LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA +
Sbjct: 248 --------SLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVT 299
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+GYQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G
Sbjct: 300 AGYQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKG 352
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+ L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 353 EADLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN 398
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 ---------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|418167294|ref|ZP_12803949.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA17971]
gi|353829286|gb|EHE09420.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA17971]
Length = 671
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 163/532 (30%), Positives = 254/532 (47%), Gaps = 99/532 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEIVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ L+ L ++ +G + + WS
Sbjct: 197 LAEYKQALRRIKFEELFYFQM-----QLQTLKSENRVQG-----------SGLVLNWSQE 240
Query: 501 TKKLLRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
++A LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +
Sbjct: 241 KVTAVKASLPFALTQAQEKSLQEILTDMKSDHYMNRLLQGDVGSGKTVVAGLAMFAAVTA 300
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
GYQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+
Sbjct: 301 GYQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGE 353
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 354 ADLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN- 398
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 --------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|402492925|ref|ZP_10839682.1| ATP-dependent DNA helicase RecG [Aquimarina agarilytica ZC1]
Length = 701
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 133/354 (37%), Positives = 187/354 (52%), Gaps = 55/354 (15%)
Query: 384 PIYPSKGGLNA-SLLRDTIARALQALPAN----FD-PVPKEITQEFGLLCLFDAYMGIHQ 437
PIY S L ++ +++ +Q L FD +PK I + L+ +A + IH
Sbjct: 151 PIYSSTEMLQRRNITNKVVSKMVQNLFLTKGVFFDETLPKNILEHMKLIGKSEALLNIHF 210
Query: 438 PKHIDEADLARKRLIFDEFFYLQL----GRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAY 493
PK + A RL F+E FY+QL + Q + G FEK G L +
Sbjct: 211 PKSQELLTKASYRLKFEELFYIQLQLIRKNILQKQKIKGYAFEKVG--------ELFTNF 262
Query: 494 MEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLAC 553
E + LP+SLT +Q + EI D+ MNRLLQGDVG GKT+VA ++
Sbjct: 263 YENY----------LPFSLTGAQKRVVKEIRRDMGSEAQMNRLLQGDVGSGKTIVALMSM 312
Query: 554 MEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRK 613
+ I +GYQA M PT +LA QH++ + L+ ++ ++LL GST K R I
Sbjct: 313 LLAIDNGYQATLMAPTAILAKQHFDGISALVKDL-----PIHVSLLMGSTKTKARREIHA 367
Query: 614 DLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAM 673
DL+ G I ++IGTH+L+ +KV+F+ L LAI+DEQ RFGV QR + K
Sbjct: 368 DLENGQIHIIIGTHALLEDKVKFNNLGLAIIDEQHRFGVAQRAKLWRK------------ 415
Query: 674 VNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PHVL M+ATPIPRTLA++LYGD+ ++ I +LPPGR IKT
Sbjct: 416 ----------NELPPHVLVMTATPIPRTLAMSLYGDLDVSVIDELPPGRKSIKT 459
>gi|418087370|ref|ZP_12724539.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47033]
gi|353758386|gb|EHD38978.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47033]
Length = 671
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 162/533 (30%), Positives = 256/533 (48%), Gaps = 101/533 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWS 498
+ E A +R+ F+E FY Q+ L+ L ++ + GL+ + + ++ A +
Sbjct: 197 LAEYKQALRRIKFEELFYFQM-----QLQTLKSENRVQGSGLVLNWSQEKVTAVKV---- 247
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
+LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA +
Sbjct: 248 --------SLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVT 299
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+GYQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G
Sbjct: 300 AGYQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKG 352
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+ L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 353 EADLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN 398
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 ---------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|255658147|ref|ZP_05403556.1| ATP-dependent DNA helicase RecG [Mitsuokella multacida DSM 20544]
gi|260849454|gb|EEX69461.1| ATP-dependent DNA helicase RecG [Mitsuokella multacida DSM 20544]
Length = 687
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 154/523 (29%), Positives = 241/523 (46%), Gaps = 79/523 (15%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
+ + G+ + +L G + +L +FPRTY D Q+A + D
Sbjct: 7 VQYLKGVGPKKKAELARLGIARVYDVLTYFPRTYED-QSALTRIAD-------------- 51
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFR-GTRFTSIPF 329
++ G T T +VN+ ++ L + G+ + +
Sbjct: 52 -LRPG----------------TVATVAGTIVNLQEQTGRRGLTILTAYLNDGSGLLQVTW 94
Query: 330 L--KSIEGKHKVGEFVCVSGK-VRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
K ++ K KVG V VSGK A + + M + + DE + + G P+Y
Sbjct: 95 FNQKYLKNKLKVGRRVFVSGKPAYAYGGHGQFAMSQLRYFQILDEGEQAAGLCG-ILPVY 153
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL 446
+ LN R + AL+A + +P I E L+ +A +H PK +E
Sbjct: 154 AATERLNQKFFRTLVEEALEAADELPELIPARILAERKLMGRREALRAVHFPKDGEELKR 213
Query: 447 ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLR 506
AR RL F E + +Q G L + + ++ RL + L +L
Sbjct: 214 ARYRLAFSELYLIQCGLLL--------------IKKQSQQTRLGIRHQPN-GKLVAAVLS 258
Query: 507 ALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFM 566
LP++LT Q A EI D+++ VPM RL+QGDVG GKTV+A LA ++ + +G+Q A M
Sbjct: 259 GLPFTLTHDQQQAWQEICRDMERTVPMRRLVQGDVGSGKTVIAMLALVKTVETGWQGAMM 318
Query: 567 VPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGT 626
PTE+LA QHYE+L L + ++ L+G ++ R + + + ++ +VIGT
Sbjct: 319 APTEILAAQHYENLSAKLAPL-----GIRVGYLSGHLTPRERREMHEAIACHEVDIVIGT 373
Query: 627 HSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHM 686
H+LI + V F+ L L I DEQ RFG+ QR K +
Sbjct: 374 HALIQDDVHFARLGLVITDEQHRFGIAQRAALEKKGAHV--------------------- 412
Query: 687 APHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYI 729
P VL M+ATPIPRT+ L +YGD+ ++ I +LPPGR PI+T++
Sbjct: 413 -PDVLVMTATPIPRTMTLTVYGDLDVSLIRELPPGRQPIRTFV 454
>gi|387818718|ref|YP_005679065.1| ATP-dependent DNA helicase RecG [Clostridium botulinum H04402 065]
gi|322806762|emb|CBZ04331.1| ATP-dependent DNA helicase RecG [Clostridium botulinum H04402 065]
Length = 679
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 164/530 (30%), Positives = 252/530 (47%), Gaps = 100/530 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
I+ + G+ + QLE C + + LL +FPR Y + N D +++S +
Sbjct: 7 ITTLKGVGPKTKEQLEKCMIFNIMDLLLYFPRDYEFIDNYSKD-----------KLLSKK 55
Query: 271 GMKAGCSFSFLEVIVGCEIA----DTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
VI+ ++ D T +G + I I+ +K G+ F
Sbjct: 56 ------------VIIKVQVENIKRDIRTRTGKILTTI-------IFNDGEKAIVGSWFNQ 96
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
P++K+ K+GE + G ++ R N + N +LK++ + + R P Y
Sbjct: 97 -PYIKNY---FKIGEEYVLQGSLKEYRGN----LTINNAQILKNKCAEEVEER-RIIPKY 147
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL 446
P KG L +LL + L + + +P + +++ L L + IH+P++ E +
Sbjct: 148 PLKGDLKNNLLIKLVDSVLTNIDIG-ENLPIWLIEKYKFLSLDKSIRTIHKPENQKELEE 206
Query: 447 ARKRLIFDEF--FYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK- 503
+ +RL F E + L++ L + LE EG S + +
Sbjct: 207 SIRRLKFQELLAYCLKIAFLKEYLE----------------------TATEGISFIVSEE 244
Query: 504 ---LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
L+ LP+ LT++Q + EI D ++ PMNRLLQGDVG GKT++A ++ VI +G
Sbjct: 245 INNLIEVLPFKLTNAQNKVLQEIFKDQEKEKPMNRLLQGDVGSGKTIIALISLFNVIKNG 304
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQ + PTE+LA QHYE LKL + + I LL GS V + I++ L+ G I
Sbjct: 305 YQGVMLAPTEILAVQHYEEALKLFKDFNLN-----IELLIGSIKVSSKKEIKEKLKEGKI 359
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
L+IGTH+LI + VEF L + I DEQ RFGV+QR + M+N S
Sbjct: 360 DLIIGTHALIEDDVEFYNLGMVITDEQHRFGVMQRSK---------------MLNKGKS- 403
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
L MSATPIPR+L L+LYGD+ L+ I +LPPGR I TY +
Sbjct: 404 -------VDTLVMSATPIPRSLTLSLYGDLDLSIIDELPPGRQKIDTYYV 446
>gi|168493601|ref|ZP_02717744.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae
CDC3059-06]
gi|418090052|ref|ZP_12727206.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA43265]
gi|418099017|ref|ZP_12736114.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 6901-05]
gi|418105797|ref|ZP_12742853.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA44500]
gi|418115211|ref|ZP_12752197.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 5787-06]
gi|418117369|ref|ZP_12754338.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 6963-05]
gi|418134659|ref|ZP_12771516.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA11426]
gi|418174084|ref|ZP_12810696.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA41277]
gi|419433971|ref|ZP_13974089.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA40183]
gi|419440879|ref|ZP_13980924.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA40410]
gi|419465241|ref|ZP_14005132.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA04175]
gi|419535154|ref|ZP_14074653.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA17457]
gi|421281682|ref|ZP_15732479.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA04672]
gi|183576417|gb|EDT96945.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae
CDC3059-06]
gi|353761243|gb|EHD41815.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA43265]
gi|353768999|gb|EHD49521.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 6901-05]
gi|353775973|gb|EHD56452.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA44500]
gi|353785295|gb|EHD65714.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 5787-06]
gi|353788050|gb|EHD68448.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 6963-05]
gi|353838040|gb|EHE18121.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA41277]
gi|353901896|gb|EHE77426.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA11426]
gi|379536841|gb|EHZ02027.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA04175]
gi|379563315|gb|EHZ28319.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA17457]
gi|379576972|gb|EHZ41896.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA40183]
gi|379577949|gb|EHZ42866.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA40410]
gi|395880947|gb|EJG91998.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA04672]
Length = 671
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 162/533 (30%), Positives = 256/533 (48%), Gaps = 101/533 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWS 498
+ E A +R+ F+E FY Q+ L+ L ++ + GL+ + + ++ A +
Sbjct: 197 LAEYKQALRRIKFEELFYFQM-----QLQTLKSENRVQGSGLVLNWSQEKVTAVKV---- 247
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
+LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA +
Sbjct: 248 --------SLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVT 299
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+GYQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G
Sbjct: 300 AGYQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKG 352
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+ L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 353 EADLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN 398
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 ---------PDVLMMTATPIPRTLAITAFGDMDVSIIGQMPAGRKPIVTRWIK 442
>gi|111225168|ref|YP_715962.1| ATP-dependent DNA helicase RecG [Frankia alni ACN14a]
gi|111152700|emb|CAJ64443.1| ATP-dependent DNA helicase recG [Frankia alni ACN14a]
Length = 725
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 133/416 (31%), Positives = 204/416 (49%), Gaps = 58/416 (13%)
Query: 338 KVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDE---DDLSLRAKGRPYPIYPSKGGLNA 394
+ G +GKV R H ++ + +L+ E D + PIYP+ + +
Sbjct: 106 RAGTTALFAGKVDEYR--GHRQLTNPEVQLLESEVEGDVTGAQFANALVPIYPAAAKVPS 163
Query: 395 SLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFD 454
L + AL +L DP+P+++ + L L +AY +HQP E RKRL +D
Sbjct: 164 WTLARCVRLALDSLGPLEDPLPEDLRRRHRLCTLAEAYRLVHQPSSRVEVATGRKRLTWD 223
Query: 455 EFFYLQLG-----RLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALP 509
E LQ+ R Q L +GLL + ALP
Sbjct: 224 EALVLQVALARRRRDVQALATTARSARPDGLLAAFDA--------------------ALP 263
Query: 510 YSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPT 569
+ LT+ Q + I D+ +PVPM+RLLQG+VG GKTVVA + + V+ +G QA + PT
Sbjct: 264 FPLTAGQREVGATIAADIGRPVPMHRLLQGEVGSGKTVVALRSMLIVVDAGGQAVLLAPT 323
Query: 570 ELLATQHYEHLLKLLDNMEE------DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
E LA QHY L ++L ++ D+ ++ L+TGS + R D+ G LV
Sbjct: 324 ETLAAQHYRSLREMLGDLARSGELGADEQATRVILVTGSMGARARREALADISEGSAGLV 383
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GTH+L+ E+V F+ L L IVDEQ RFGV QR ++
Sbjct: 384 VGTHALLHEEVVFADLGLIIVDEQHRFGVEQRDALRAR---------------------- 421
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYEN 739
PH+L M+ATPIPRT+A+ ++GD+ ++++T+LP GR PI T+++ + + +
Sbjct: 422 GRRPPHLLVMTATPIPRTVAMTVFGDLEVSELTELPSGRSPIATFVVPAAIRSWAD 477
>gi|406959922|gb|EKD87143.1| hypothetical protein ACD_37C00027G0003 [uncultured bacterium]
Length = 670
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 161/532 (30%), Positives = 250/532 (46%), Gaps = 97/532 (18%)
Query: 205 PLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYAD--LQNAQIDLDDGQYFIF 262
P L + G+ KR + L+ G L+H P Y D + + +L +G+
Sbjct: 2 PDLSSPVVSAGGIYKRYANSLKKLGIDKFLDFLYHIPFRYEDYSIVSNVGNLQEGETVTI 61
Query: 263 IGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGT 322
G I +K + F + +IAD T +V+ +
Sbjct: 62 RGNI---SDLKNQYTRRF-RTLQKAKIADK--TGAIDVIWFNQ----------------- 98
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
PFL K G+ + +SGKV R N + ++ + ++ D L GR
Sbjct: 99 -----PFLLKT---FKTGDSISISGKVE--RQVNDFILKSPDYEM----DGEELIHTGRL 144
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHID 442
PIYP G+++ +R + L+ A D +P++I +E LL L D+ IH PK+++
Sbjct: 145 VPIYPETRGVSSRWIRRQVFFLLKENKAVKDFLPEKIKKENELLSLADSLQTIHFPKNLN 204
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGL----GTQFEKEGLLDKYRKPRLNAAYMEGWS 498
+ A+KRL FDE F LQL L + E G +F+ ++ +
Sbjct: 205 DVGSAKKRLSFDELFLLQLSALERKKEWAKNLKGIKFD-----------------VKSYK 247
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
++ + +LP+ LTS+Q A+ EI+ DL + PMNRLL+GDVG GKTVVA +A
Sbjct: 248 EKIEQFISSLPFELTSAQKKALQEILDDLSKNKPMNRLLEGDVGSGKTVVATVAMYLAFL 307
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+G ++ M PTE+LA QHY+ L LL K K+ L T + +K +
Sbjct: 308 NGLKSIIMAPTEILANQHYQTLSTLL-----SKFGVKVDLQTAN---------KKLSEKA 353
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+++GTH+++ K F + L ++DEQQRFGV QR +K
Sbjct: 354 SFDILVGTHAVLFGKRSFKKVGLVVIDEQQRFGVEQRSLLRAK----------------- 396
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
PHVL M+ATPIPRT+ALALYGD+ L+ + ++P GR +KT+++
Sbjct: 397 ------GQNPHVLTMTATPIPRTVALALYGDLDLSLLDEMPKGRKVVKTWLV 442
>gi|291543374|emb|CBL16483.1| ATP-dependent DNA helicase RecG [Ruminococcus champanellensis
18P13]
Length = 680
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 164/532 (30%), Positives = 244/532 (45%), Gaps = 94/532 (17%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L + IS + G+ ++ G T LL H PR+Y D +N E
Sbjct: 4 LFRPISALRGVGEKRAKAYARLGIQTPYDLLFHIPRSYLDFRNP--------------EP 49
Query: 267 ISSRGMKAGCSFSFLEVIVGC---EIADTETTSGDEVVNIDS--GQKKKIYLHLKKFFRG 321
+ S + C V+ GC ++ + G V + G+ + F+
Sbjct: 50 VLSAPLDTPC------VVEGCITRKLPEQRIRKGLSVFKATATDGESDFTVVFYNNFYA- 102
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
F ++ KVGE +GK+ +Y L+ + + ++
Sbjct: 103 --FDAL----------KVGETYRFAGKLTGTLLRREIHSPQY----LRADCPVLMK---- 142
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPAN-FDPVPKEITQEFGLLCLFDAYMGIHQPKH 440
P+YP GL +++ + +AL+ L FD +P I +++ L L +A +HQP
Sbjct: 143 --PVYPLTNGLTNPMVQANMRQALELLRREPFDGLPSGIRRQYDLCTLPEALGVVHQPAS 200
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
A++RL FD + G+L + R AY +
Sbjct: 201 EPILQEAKRRLAFD-----------------ALLQLQLGMLMLRNRSRAQTAYTMDPDTD 243
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
+LP++ T++Q +I+EI DL + VP NRLLQGDVG GKT VA AC +G
Sbjct: 244 LTPFYASLPFAPTNAQKRSIAEICGDLCRTVPANRLLQGDVGSGKTAVAAAACYFTCKNG 303
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
+Q+A M PTE+LATQHY L L + ++ LLTGS P K+ R IR LQ G++
Sbjct: 304 FQSALMAPTEILATQHYHTLEGFLSPL-----GIRVGLLTGSLPAKEKRRIRTALQAGEL 358
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+++GTH+LI + F AL L I DEQ RFGV QR A+ G+
Sbjct: 359 DVLVGTHALIQKDTVFPALGLVITDEQHRFGVGQRA---------------ALAQKGGT- 402
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEG 732
PH L MSATPIPRTLAL +YGD+ ++ + +LP GR+PI+TY + G
Sbjct: 403 -------PHKLVMSATPIPRTLALIVYGDLDISVLDELPVGRLPIRTYAVTG 447
>gi|168491421|ref|ZP_02715564.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae
CDC0288-04]
gi|418194262|ref|ZP_12830751.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47439]
gi|183574121|gb|EDT94649.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae
CDC0288-04]
gi|353857840|gb|EHE37802.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47439]
Length = 671
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 163/532 (30%), Positives = 254/532 (47%), Gaps = 99/532 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAAN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ L+ L ++ +G + + WS
Sbjct: 197 LAEYKQALRRIKFEELFYFQM-----QLQTLKSENRVQG-----------SGLVLNWSQE 240
Query: 501 TKKLLRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
++A LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +
Sbjct: 241 KVTAVKASLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTA 300
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
GYQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+
Sbjct: 301 GYQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGE 353
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 354 ADLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN- 398
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 --------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|339443360|ref|YP_004709365.1| hypothetical protein CXIVA_22960 [Clostridium sp. SY8519]
gi|338902761|dbj|BAK48263.1| hypothetical protein CXIVA_22960 [Clostridium sp. SY8519]
Length = 685
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 128/361 (35%), Positives = 189/361 (52%), Gaps = 44/361 (12%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
P+Y GL +R + L+ LP + + +P++I Q L+ A +H P+
Sbjct: 145 PVYALTKGLKNQAVRKAVTAVLEDLPRDMEYLPEDIRQRHHLMPYDFAVRNMHFPEDETA 204
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
AR R FDEF+ L QM ++ P + +G+ T +
Sbjct: 205 CIAARTRFAFDEFYLF----LLQMHRSRSQTLQE---------PNSFSFVDDGF---TDR 248
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
+R LPY+LT +QL + E+ D++ M RL+QGDVG GKT+VAFLA ++ + SGYQA
Sbjct: 249 RIRQLPYALTHAQLRTLREVQADMRGASVMQRLIQGDVGSGKTIVAFLAMLDAVHSGYQA 308
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A M PT++LA QHY+ KL D + ++ LLTGS R + ++TG L+
Sbjct: 309 AIMAPTDVLARQHYQ---KLTDFCQRAGADCEVVLLTGSLQAAARREALEKIRTGQGALI 365
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GTH+LI + V + L L + DEQ RFGV QR F +K
Sbjct: 366 VGTHALIQDAVAYRRLALVVTDEQHRFGVRQRAAFAAK---------------------G 404
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN--EKGYENVY 741
+H PH+L MSATPIPRTLA+ LYGD+ ++ I +LP R+P+K ++ G+ +K Y +
Sbjct: 405 EH--PHILVMSATPIPRTLAIILYGDLDISVIDELPARRLPVKNCVVTGSYRQKAYAFIE 462
Query: 742 K 742
K
Sbjct: 463 K 463
>gi|253700922|ref|YP_003022111.1| ATP-dependent DNA helicase RecG [Geobacter sp. M21]
gi|251775772|gb|ACT18353.1| ATP-dependent DNA helicase RecG [Geobacter sp. M21]
Length = 772
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 168/564 (29%), Positives = 265/564 (46%), Gaps = 107/564 (18%)
Query: 200 EASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQY 259
+A I L + + G+ +L L G T+ L+ P Y D +
Sbjct: 65 QAVIPEELKTPMQSIKGVGPKLAATLSKKGLNTVEDALYLLPNRYEDRR----------- 113
Query: 260 FIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSG-----DEVVNIDSGQKKKIYLH 314
E+ ++ G S +F +V A +TT G + +V ++G + H
Sbjct: 114 -----ELKKIAQLRPGNSEAFFATVVS---AGAQTTKGGRRYFEAIVKDETGSLPLKWFH 165
Query: 315 LKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNID-------V 367
F + +P K I F+ + R +H E+ E+ ++ +
Sbjct: 166 FHPNFLAKQL--VPGRKGI--------FIGDVAQFGFQREMHHPEV-EWAVEGEDLSQVM 214
Query: 368 LKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFD-PVPKEITQEFGLL 426
+D D+ G P+YP G++ ++R + A+Q +P E+ + LL
Sbjct: 215 ARDPDNF-----GSILPVYPLTEGVSQKVMRRIMRDAVQRYSRYVKGALPDELLRRHQLL 269
Query: 427 CLFDAYMGIHQPKHIDEADL---------ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEK 477
L A H P ++DL A + L FDE F+LQ+G +K
Sbjct: 270 PLPVALRDAHLPAQ--DSDLSALNSGRSAAHRSLAFDELFFLQMG----------LALKK 317
Query: 478 EGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLL 537
G+ + + + TK+LL+ LP+SLT++Q +SEI D+ P PM+RL+
Sbjct: 318 RGIAVE------DGISFQVTHRYTKELLKLLPFSLTAAQKRVLSEIKEDMMSPHPMHRLV 371
Query: 538 QGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIA 597
QGDVGCGKT+VA +A + + + YQ A M PTELLA QHY ++ +N+ + +A
Sbjct: 372 QGDVGCGKTLVALMAALVCVENDYQVAIMAPTELLAEQHYLNIHGYCENLGIN-----VA 426
Query: 598 LLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGR 657
LLT S K + + + +G +V+GTH++I EKVEF+ L L I+DEQ RFGVVQR
Sbjct: 427 LLTASVKGKGDTLDK--IASGATQIVVGTHAVIQEKVEFNRLGLGIIDEQHRFGVVQR-- 482
Query: 658 FNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITD 717
A++ G+ P +L M+ATPIPRTL++ ++GD+SL+ I +
Sbjct: 483 --------------ALLKKKGA-------NPDILVMTATPIPRTLSMTVFGDLSLSVIDE 521
Query: 718 LPPGRIPIKTYIIEGNEKGYENVY 741
LPPGR PI+T ++ E + VY
Sbjct: 522 LPPGRTPIETRMV--RESRRKEVY 543
>gi|418162740|ref|ZP_12799421.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA17328]
gi|419526410|ref|ZP_14065968.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA14373]
gi|353826802|gb|EHE06959.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA17328]
gi|379557050|gb|EHZ22097.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA14373]
Length = 671
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 163/532 (30%), Positives = 254/532 (47%), Gaps = 99/532 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ L+ L ++ +G + + WS
Sbjct: 197 LAEYKQALRRIKFEELFYFQM-----QLQTLKSENRIQG-----------SGLVLNWSQE 240
Query: 501 TKKLLRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
++A LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +
Sbjct: 241 KVTAVKASLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTA 300
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
GYQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+
Sbjct: 301 GYQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGE 353
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 354 ADLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN- 398
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 --------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|393757968|ref|ZP_10346792.1| ATP-dependent DNA helicase RecG [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393165660|gb|EJC65709.1| ATP-dependent DNA helicase RecG [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 693
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 132/359 (36%), Positives = 187/359 (52%), Gaps = 42/359 (11%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQP----- 438
P+YP+ GL+ + LR IA AL D +P+++ E+GL+ +A +H P
Sbjct: 146 PVYPTTDGLSQTQLRKAIADALNTADLR-DTLPEQVRAEYGLMPFNEAIRLLHYPPPELS 204
Query: 439 --KHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG 496
+ ++ A R+ FDE QL + + KP E
Sbjct: 205 YDELFEQGHPAWSRIKFDELLAQQLS----------LAQARAARQAQRAKP-----MREA 249
Query: 497 WSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEV 556
S L + LL +LP+SLT++Q + EI DLK+ PM+RLLQGDVG GKT+V+ +A ++
Sbjct: 250 KSDLLQSLLASLPFSLTAAQQRCVKEISADLKRSYPMHRLLQGDVGSGKTIVSAIAAVQA 309
Query: 557 IGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQ 616
I SG+Q A M PTE+LA QHY + L+ + ++A L+GS VK R+ + +
Sbjct: 310 IASGFQVALMAPTEILAEQHYLKMRTWLEPL-----GVELAWLSGSLGVKAKRLAYEAIH 364
Query: 617 TGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNS 676
+G L IGT +LI + V+F L L I+DEQ RFGV QR N K
Sbjct: 365 SGQARLAIGTQALIQDNVQFHKLGLVILDEQHRFGVGQRLELNRK--------------G 410
Query: 677 DGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
D Q PH L MSATPIPRTLA+A + D+ ++ I +LPPGR PI T + N +
Sbjct: 411 DAQDNKGQAYLPHQLNMSATPIPRTLAMAFFADLDVSAIDELPPGRSPIITKLAADNRR 469
>gi|306841771|ref|ZP_07474457.1| ATP-dependent DNA helicase RecG [Brucella sp. BO2]
gi|306288176|gb|EFM59563.1| ATP-dependent DNA helicase RecG [Brucella sp. BO2]
Length = 714
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 145/396 (36%), Positives = 197/396 (49%), Gaps = 57/396 (14%)
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRD 399
GE V VSGKV +Y I + D L L P+YP GL+ L
Sbjct: 134 GETVIVSGKVEWFNGRASMVHPDY-IASMDDAASLPLVE-----PVYPLTAGLSPKTLGR 187
Query: 400 TIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA-----RKRLIFD 454
I AL +P + + + G A +HQP+ D D+A R+RL +D
Sbjct: 188 AIKEALTRVPVLPEWIDAPLLAREGFPAFQQALNTLHQPE--DPGDIALESITRRRLAYD 245
Query: 455 EFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTS 514
EF QL L + + RL+ +EG ++ +++R LPY LT
Sbjct: 246 EFLAGQLALA----------------LVRAKTRRLSGRPLEGTGNIVAEIMRHLPYRLTK 289
Query: 515 SQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLAT 574
+Q A+ EII DLK P M RLLQGDVG GKTVV L+ SG Q+A M PTE+LA
Sbjct: 290 AQEQAVREIITDLKSPQRMLRLLQGDVGSGKTVVGLLSMAHAAESGGQSALMAPTEVLAR 349
Query: 575 QHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKV 634
QH+ + L +K K ALLTG ++ + + L++G+I +VIGTH+L EKV
Sbjct: 350 QHFATIAPL-----AEKAGLKAALLTGREKGRERNAVLEGLKSGEIDIVIGTHALFQEKV 404
Query: 635 EFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMS 694
E+ L I+DEQ RFGV QR M+ + GS AP +L M+
Sbjct: 405 EYHDLVFVIIDEQHRFGVHQR----------------LMLTAKGS-------APDMLVMT 441
Query: 695 ATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
ATPIPRTL L +GDM ++++T+ P GR PI T I+
Sbjct: 442 ATPIPRTLVLTAFGDMDVSKLTEKPVGRQPITTAIV 477
>gi|154493809|ref|ZP_02033129.1| hypothetical protein PARMER_03152 [Parabacteroides merdae ATCC
43184]
gi|423724575|ref|ZP_17698720.1| ATP-dependent DNA helicase RecG [Parabacteroides merdae CL09T00C40]
gi|154086422|gb|EDN85467.1| ATP-dependent DNA helicase RecG [Parabacteroides merdae ATCC 43184]
gi|409237556|gb|EKN30355.1| ATP-dependent DNA helicase RecG [Parabacteroides merdae CL09T00C40]
Length = 698
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 155/436 (35%), Positives = 214/436 (49%), Gaps = 70/436 (16%)
Query: 317 KFFRGTRFTSIPFLKSIE---GKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDD 373
KF GT + + K I K K G V GK + Y + +ID L D
Sbjct: 85 KFTDGTGTIDLVWFKGINYVLDKIKTGVDYIVFGK--PTEFGHIYNIPHPDIDPLDQADK 142
Query: 374 LSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANF---------DPVPKEITQEFG 424
+ A G P Y + + S L +RA+Q L + +P ++
Sbjct: 143 V---ANGLT-PFYNTSEKMKKSFLN---SRAIQNLQYTLLSGLNWTLPETLPPDVLNRIR 195
Query: 425 LLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRL----YQMLEGLGTQFEKEGL 480
++ +A +H P+ +D+ A+ RL FDE F++QL L + L+ G F G
Sbjct: 196 MMSFPEAIRNVHFPESVDKLRKAQLRLKFDELFFIQLNILRTSNLRKLKLRGIVFPSVG- 254
Query: 481 LDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGD 540
N Y E LP+ LT++Q + EI D+ MNRLLQGD
Sbjct: 255 ------DYFNTFYKE-----------YLPFELTNAQKRVVREIRADMGSGRQMNRLLQGD 297
Query: 541 VGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLT 600
VG GKT+VA L+ + + + QA M PTE+LATQHY ++ L +M+ K+ALLT
Sbjct: 298 VGSGKTLVALLSMLLAVDNHCQACMMAPTEILATQHYATVMGFLKDMD-----IKVALLT 352
Query: 601 GSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNS 660
GST K+ I + +G+I LVIGTH+LI E V FS+L LAI+DEQ RFGV QR R +
Sbjct: 353 GSTKKKERNKILPAIASGEIQLVIGTHALIEETVVFSSLGLAIIDEQHRFGVEQRSRLWT 412
Query: 661 KLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPP 720
K + PHVL M+ATPIPRTLA+ LYGD+ ++ I +LPP
Sbjct: 413 K----------------------NAVVPHVLVMTATPIPRTLAMTLYGDLDVSVIDELPP 450
Query: 721 GRIPIKTYIIEGNEKG 736
GR PI+T N+K
Sbjct: 451 GRKPIQTVHRYDNKKA 466
>gi|116516080|ref|YP_816963.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae D39]
gi|116076656|gb|ABJ54376.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae D39]
Length = 671
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 163/532 (30%), Positives = 254/532 (47%), Gaps = 99/532 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ L+ L ++ +G + + WS
Sbjct: 197 LAEYKQALRRIKFEELFYFQM-----QLQTLKSENRVQG-----------SGLVLNWSQE 240
Query: 501 TKKLLRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
++A LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +
Sbjct: 241 KVTAVKASLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTA 300
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
GYQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+
Sbjct: 301 GYQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGE 353
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 354 ADLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN- 398
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 --------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|418079118|ref|ZP_12716340.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 4027-06]
gi|418081316|ref|ZP_12718526.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 6735-05]
gi|353746645|gb|EHD27305.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 4027-06]
gi|353752055|gb|EHD32686.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 6735-05]
Length = 671
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 162/533 (30%), Positives = 256/533 (48%), Gaps = 101/533 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWS 498
+ E A +R+ F+E FY Q+ L+ L ++ + GL+ + + ++ A +
Sbjct: 197 LAEYKQALRRIKFEELFYFQM-----QLQTLKSENRVQGSGLVLNWSQEKVTAVKV---- 247
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
+LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA +
Sbjct: 248 --------SLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVT 299
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+GYQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G
Sbjct: 300 AGYQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKG 352
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+ L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 353 EADLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN 398
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 ---------PDVLMMTATPIPRTLAITAFGDMDVSIIGQMPAGRKPIVTRWIK 442
>gi|88811932|ref|ZP_01127185.1| ATP-dependent DNA helicase RecG [Nitrococcus mobilis Nb-231]
gi|88790816|gb|EAR21930.1| ATP-dependent DNA helicase RecG [Nitrococcus mobilis Nb-231]
Length = 697
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 141/376 (37%), Positives = 193/376 (51%), Gaps = 56/376 (14%)
Query: 378 AKGRPY-------PIYPSKGGLNASLLRDTIARALQ---ALPANFDPVPKEITQEFGLLC 427
A GRP P+YPS GL+ + LR RAL+ A A + +P+ + +E GL
Sbjct: 138 APGRPISGEKELTPVYPSTEGLDQASLRRLTRRALEEAMAGRAGVELLPRRLREELGLPK 197
Query: 428 LFDAYMGIHQPKHIDEA-DL------ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGL 480
L +A +H P A DL A +RLI +E +L L
Sbjct: 198 LIEALRLLHAPPSTASATDLIARRHPAVRRLILEELLAHRLSLLR--------------- 242
Query: 481 LDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGD 540
L +R+ +A ++G +L + L LP+ LTS+Q + E+ D+ Q PM RL+QGD
Sbjct: 243 LRDHRQLAKSAPKLQGTGALLEAWLARLPFRLTSAQRRVMREVAKDMGQARPMLRLVQGD 302
Query: 541 VGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLT 600
VGCGKTV+A LA + + +G+Q AFM PTELLA QHY + L + + A LT
Sbjct: 303 VGCGKTVIAALAALTTVEAGWQVAFMAPTELLAEQHYRTFQRWLAPLGVET-----AWLT 357
Query: 601 GSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNS 660
G R K L G+I +V+GTH+L ++V F L LAIVDEQ RFGV QR
Sbjct: 358 GRLAASSRREHIKRLANGEIRVVMGTHALFQDQVVFHRLGLAIVDEQHRFGVHQR----- 412
Query: 661 KLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPP 720
+A+ N G + + PH L M+ATPIPRTLA+ Y D+ ++ I +LPP
Sbjct: 413 ----------LALKNKSGV----EEIQPHQLIMTATPIPRTLAMTAYADLDVSVIDELPP 458
Query: 721 GRIPIKTYIIEGNEKG 736
GR PI T I +G
Sbjct: 459 GRKPIITVAISDARRG 474
>gi|225629077|ref|ZP_03787110.1| ATP-dependent DNA helicase RecG [Brucella ceti str. Cudo]
gi|225615573|gb|EEH12622.1| ATP-dependent DNA helicase RecG [Brucella ceti str. Cudo]
Length = 714
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 145/396 (36%), Positives = 197/396 (49%), Gaps = 57/396 (14%)
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRD 399
GE V VSGKV +Y I + D L L P+YP GL+ L
Sbjct: 134 GETVIVSGKVEWFNGRASMVHPDY-IASMDDAASLPLVE-----PVYPLTAGLSPKTLGR 187
Query: 400 TIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA-----RKRLIFD 454
I AL +P + + + G A +HQP+ D D+A R+RL +D
Sbjct: 188 AIKEALTRVPVLPEWIDAPLLAREGFPAFQQALNTLHQPE--DPGDIALESITRRRLAYD 245
Query: 455 EFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTS 514
EF QL L + + RL+ +EG ++ +++R LPY LT
Sbjct: 246 EFLAGQLALA----------------LVRAKTRRLSGRPLEGTGNIVAEIMRHLPYRLTK 289
Query: 515 SQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLAT 574
+Q A+ EII DLK P M RLLQGDVG GKTVV L+ SG Q+A M PTE+LA
Sbjct: 290 AQEQAVREIITDLKSPQRMLRLLQGDVGSGKTVVGLLSMAHAAESGGQSALMAPTEVLAR 349
Query: 575 QHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKV 634
QH+ + L +K K ALLTG ++ + + L++G+I +VIGTH+L EKV
Sbjct: 350 QHFATIAPL-----AEKAGLKAALLTGREKGRERNAVLEGLKSGEIDIVIGTHALFQEKV 404
Query: 635 EFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMS 694
E+ L I+DEQ RFGV QR M+ + GS AP +L M+
Sbjct: 405 EYHDLVFVIIDEQHRFGVHQR----------------LMLTAKGS-------APDMLVMT 441
Query: 695 ATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
ATPIPRTL L +GDM ++++T+ P GR PI T I+
Sbjct: 442 ATPIPRTLVLTAFGDMDVSKLTEKPVGRQPITTAIV 477
>gi|148984139|ref|ZP_01817434.1| N-acetylmannosamine-6-phosphate 2-epimerase [Streptococcus
pneumoniae SP3-BS71]
gi|225861521|ref|YP_002743030.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae
Taiwan19F-14]
gi|387757916|ref|YP_006064895.1| ATP-dependent DNA helicase [Streptococcus pneumoniae OXC141]
gi|387788741|ref|YP_006253809.1| N-acetylmannosamine-6-phosphate 2-epimerase [Streptococcus
pneumoniae ST556]
gi|417313174|ref|ZP_12099886.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA04375]
gi|417696857|ref|ZP_12346035.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47368]
gi|418085690|ref|ZP_12722869.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47281]
gi|418092300|ref|ZP_12729440.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA44452]
gi|418094488|ref|ZP_12731615.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA49138]
gi|418108126|ref|ZP_12745163.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA41410]
gi|418119146|ref|ZP_12756103.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA18523]
gi|418142210|ref|ZP_12779023.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA13455]
gi|418151203|ref|ZP_12787949.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA14798]
gi|418153436|ref|ZP_12790174.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA16121]
gi|418157995|ref|ZP_12794711.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA16833]
gi|418169797|ref|ZP_12806438.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA19077]
gi|418171833|ref|ZP_12808457.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA19451]
gi|418221727|ref|ZP_12848380.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47751]
gi|418228203|ref|ZP_12854820.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 3063-00]
gi|418232696|ref|ZP_12859282.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA07228]
gi|418237151|ref|ZP_12863717.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA19690]
gi|419429896|ref|ZP_13970060.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA11856]
gi|419438734|ref|ZP_13978802.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA13499]
gi|419449482|ref|ZP_13989478.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 4075-00]
gi|419502348|ref|ZP_14042032.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47628]
gi|421273351|ref|ZP_15724191.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae SPAR55]
gi|147923428|gb|EDK74541.1| N-acetylmannosamine-6-phosphate 2-epimerase [Streptococcus
pneumoniae SP3-BS71]
gi|225728405|gb|ACO24256.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae
Taiwan19F-14]
gi|301800505|emb|CBW33144.1| ATP-dependent DNA helicase [Streptococcus pneumoniae OXC141]
gi|327389882|gb|EGE88227.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA04375]
gi|332200255|gb|EGJ14328.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47368]
gi|353756399|gb|EHD37000.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47281]
gi|353763000|gb|EHD43557.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA44452]
gi|353764984|gb|EHD45532.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA49138]
gi|353778403|gb|EHD58871.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA41410]
gi|353791098|gb|EHD71479.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA18523]
gi|353806461|gb|EHD86735.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA13455]
gi|353814413|gb|EHD94639.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA14798]
gi|353816987|gb|EHD97195.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA16121]
gi|353824443|gb|EHE04617.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA16833]
gi|353833776|gb|EHE13884.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA19077]
gi|353835570|gb|EHE15664.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA19451]
gi|353875037|gb|EHE54891.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47751]
gi|353880598|gb|EHE60413.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 3063-00]
gi|353886009|gb|EHE65793.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA07228]
gi|353891589|gb|EHE71343.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA19690]
gi|379138483|gb|AFC95274.1| N-acetylmannosamine-6-phosphate 2-epimerase [Streptococcus
pneumoniae ST556]
gi|379537141|gb|EHZ02326.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA13499]
gi|379550074|gb|EHZ15176.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA11856]
gi|379600561|gb|EHZ65342.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47628]
gi|379622100|gb|EHZ86736.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 4075-00]
gi|395873782|gb|EJG84872.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae SPAR55]
gi|429319880|emb|CCP33198.1| ATP-dependent DNA helicase [Streptococcus pneumoniae SPN034183]
gi|429321697|emb|CCP35172.1| ATP-dependent DNA helicase [Streptococcus pneumoniae SPN994039]
gi|429323518|emb|CCP31213.1| ATP-dependent DNA helicase [Streptococcus pneumoniae SPN994038]
Length = 671
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 163/532 (30%), Positives = 254/532 (47%), Gaps = 99/532 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ L+ L ++ +G + + WS
Sbjct: 197 LAEYKQALRRIKFEELFYFQM-----QLQTLKSENRVQG-----------SGLVLDWSQE 240
Query: 501 TKKLLRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
++A LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +
Sbjct: 241 KVTAVKASLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTA 300
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
GYQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+
Sbjct: 301 GYQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGE 353
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 354 ADLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN- 398
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 --------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|326335996|ref|ZP_08202172.1| DNA helicase RecG [Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325691793|gb|EGD33756.1| DNA helicase RecG [Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 700
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 135/355 (38%), Positives = 190/355 (53%), Gaps = 48/355 (13%)
Query: 379 KGRPYPIYPS-----KGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAY 432
+G +YPS K G+ ++R + +F + +P E+ Q LL +A
Sbjct: 146 QGNIQAVYPSTEKLTKRGITQRVMRRLFETLFHEVGKDFQETLPNEMLQPLRLLPKGEAL 205
Query: 433 MGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAA 492
IH P+ D A+ RL +E FY+QL Q ++ L+K K L
Sbjct: 206 FQIHFPQSQDLLAKAQFRLKLEELFYIQL------------QLIQKNYLNKKLKGFLFPK 253
Query: 493 YMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLA 552
+ +++ + LP+ LT +Q I EI D+ MNRLLQGDVG GKT+VA A
Sbjct: 254 VGDYFNTF---YYQYLPFPLTEAQKRVIKEIRNDMATGAQMNRLLQGDVGAGKTIVALFA 310
Query: 553 CMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIR 612
+ + + YQA M PTE+LA QH++ + LL + IALLTGST K+ +I
Sbjct: 311 MLLALDNHYQACLMAPTEILAQQHFQGISSLLAHT-----NVHIALLTGSTKTKERHLIH 365
Query: 613 KDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMA 672
+ L+ G + +VIGTH+L+ +KV F L LAI+DEQ RFGV QR SKL++ +
Sbjct: 366 QSLENGQLQIVIGTHALLEDKVRFHNLGLAIIDEQHRFGVEQR----SKLWHKN------ 415
Query: 673 MVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PHVL MSATPIPRTLA++LYGD+ ++ I +LPPGR PIKT
Sbjct: 416 ------------ELPPHVLIMSATPIPRTLAMSLYGDLDISVIDELPPGRKPIKT 458
>gi|395238256|ref|ZP_10416194.1| DNA helicase RecG [Lactobacillus gigeriorum CRBIP 24.85]
gi|394477960|emb|CCI86171.1| DNA helicase RecG [Lactobacillus gigeriorum CRBIP 24.85]
Length = 679
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 172/525 (32%), Positives = 252/525 (48%), Gaps = 100/525 (19%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGEIIS 268
++ + G+ + L G Y++ LL++FP Y +LQ +D + DGQ + G + +
Sbjct: 9 AVTDLKGVGTKTAADLGGLGIYSIYDLLYYFPFRYDELQTLPLDQIMDGQKVLLKGLVAT 68
Query: 269 SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIP 328
+ F + + V ++ E++ ++ F + P
Sbjct: 69 QPYVN---RFGYKKSRVSFKL-----RIDHEIIMVN-------------------FFNQP 101
Query: 329 FL-KSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYP 387
+L K +E +G+ V V GK + + M + + V K E+D + PIY
Sbjct: 102 WLAKQLE----IGKEVAVYGKFELAKQS----MTAFKL-VAKKENDSGMA------PIYS 146
Query: 388 SKGGLNASLLRDTIARALQ-ALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL 446
+ L I +A++ L D VP I Q++ L+ +H PK EA L
Sbjct: 147 VSKNIRQKKLLSLIDQAIEFGLSELEDVVPLAIRQKYRLMSEQQLVYAMHHPKSAQEAKL 206
Query: 447 ARKRLIFDEFFY--LQLGRL-YQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
A++ IF EFF LQL +L YQ + +G K + LN +
Sbjct: 207 AKRSAIFREFFIFQLQLAQLTYQGQQKVG---------GKSKNYDLNE---------IAE 248
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
L +LP+ L+ Q ++EI DL M RLLQGDVG GKTVVA A I +GYQA
Sbjct: 249 LTASLPFQLSPDQKKVVNEIYADLHSQSQMRRLLQGDVGSGKTVVAVYAIYAAITAGYQA 308
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKP---KIALLTGSTPVKQSRMIRKDLQTGDI 620
MVPTE+LATQH+ + +LL KP ++ALLTG+T + R I ++L G I
Sbjct: 309 TLMVPTEILATQHFYKIEQLL--------KPLGVRVALLTGNTKALERREIYRELTDGTI 360
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+LI + V F L L I+DEQ RFGV QR A++N
Sbjct: 361 NVVIGTHALIQDNVIFKKLGLVIIDEQHRFGVAQR---------------QALIN----- 400
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
K D+ P +LAM+ATPIPRTLAL +YG+M +++I P GR PI
Sbjct: 401 KGDR---PDILAMTATPIPRTLALTVYGEMKVSEIRHSPAGRKPI 442
>gi|443490168|ref|YP_007368315.1| ATP-dependent DNA helicase RecG [Mycobacterium liflandii 128FXT]
gi|442582665|gb|AGC61808.1| ATP-dependent DNA helicase RecG [Mycobacterium liflandii 128FXT]
Length = 743
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 158/525 (30%), Positives = 250/525 (47%), Gaps = 74/525 (14%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNAQIDLDD-----GQYFIFIGEIISSRG--MKAGCSF 278
E G T+ LL H+PR+Y + A+ DD G++ + I ++ MK
Sbjct: 22 EEFGIRTVDDLLRHYPRSYVE-GGARRGTDDEQPEVGEHITIVDVITETKSFPMKKTPRR 80
Query: 279 SFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK---FFRGTRFTSIP---FLKS 332
L + +G + T + I G K + L +F+G + P L S
Sbjct: 81 LCLRITLGSG-RNKVTATFFNADYIKKGLTKNTRVMLSGEVGYFKGVMQLTHPAFLILDS 139
Query: 333 IEGKHK-VGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGG 391
+G+H ++ +A+ + M E+ + R +PIYP+
Sbjct: 140 PDGQHHGTKSLKSIADASQAI--SGELAMEEF---------------ERRFFPIYPASTK 182
Query: 392 LNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRL 451
+ + + + + L+ L +P+P + E GL+ DA IH + E + AR+RL
Sbjct: 183 VQSWDIFKCVRQVLEVLDPVDEPLPAALRAEHGLISEDDALRAIHLAEDESEREQARRRL 242
Query: 452 IFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYS 511
FDE LQ + + + G L + P A +G L +LL LP+
Sbjct: 243 TFDEAVGLQWALVAR----------RHGELSESGPP--APARSDG---LAAELLARLPFE 287
Query: 512 LTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTEL 571
LT+ Q + E+ L PMNRLLQG+VG GKT+VA LA ++++ +GYQ A + PTE+
Sbjct: 288 LTAGQREVLDELSDGLAATRPMNRLLQGEVGSGKTIVAVLAMLQMVDAGYQCALLAPTEV 347
Query: 572 LATQHYEHL------LKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIG 625
LA QH + L + + + ++ALLTGS Q + +R ++ +G + +VIG
Sbjct: 348 LAAQHLLSINDVLGPLAMGGQLGGADNATRVALLTGSMTAGQKKQVRAEIASGQVGIVIG 407
Query: 626 THSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQH 685
TH+L+ + VEF L + +VDEQ RFGV QR + +K +P
Sbjct: 408 THALLQDAVEFHNLGMVVVDEQHRFGVEQRDQLRAK-----------------APAG--- 447
Query: 686 MAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+ PH+L M+ATPIPRT+AL +YGD+ + + +LP GR PI T +I
Sbjct: 448 ITPHLLVMTATPIPRTVALTVYGDLETSTLRELPRGRQPITTNVI 492
>gi|225572202|ref|ZP_03781066.1| hypothetical protein RUMHYD_00496 [Blautia hydrogenotrophica DSM
10507]
gi|225040374|gb|EEG50620.1| ATP-dependent DNA helicase RecG [Blautia hydrogenotrophica DSM
10507]
Length = 685
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 136/356 (38%), Positives = 186/356 (52%), Gaps = 51/356 (14%)
Query: 380 GRPYPIYPSKGGLNASLLRDTIARALQALPANF----DPVPKEITQEFGLLCLFDAYMGI 435
R PIY GL A L T+ + ++ L N + +P ++ + + L A I
Sbjct: 141 NRMQPIY----GLTAGLTNKTVTKYVRLLLENQALEGEYLPLDVRERYRLADYNFAIQNI 196
Query: 436 HQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYME 495
H PK D AR RL+FDEF + L +L + + +N M+
Sbjct: 197 HFPKDRDSLIAARSRLVFDEFLFFILSVW---------------MLKEKTQSAVNYYPMK 241
Query: 496 G-WSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACM 554
W T+KLL LPY LT +Q + E+ DL + M+RL+QGDVG GKT++AFLA +
Sbjct: 242 PVWE--TEKLLENLPYRLTKAQRNVWREVEQDLCRDRLMSRLIQGDVGSGKTILAFLAMI 299
Query: 555 EVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKD 614
+GYQAA MVPTE+LA QHY+ L LL +P LLTGST K+ R
Sbjct: 300 LTAQNGYQAALMVPTEVLAVQHYKALCGLLSEHGLGDCRP--ILLTGSTTAKEKRERYAQ 357
Query: 615 LQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMV 674
+ +G++ L++GTH+LI EKVE+ L L I DEQ RFGV QR ++
Sbjct: 358 IASGEVNLIVGTHALIQEKVEYHKLALVITDEQHRFGVRQREALTTR------------- 404
Query: 675 NSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
PHVL MSATPIPRTLA+ LYGD+ ++ I +LP R+PIK ++
Sbjct: 405 ----------GAVPHVLVMSATPIPRTLAIILYGDLDISVIDELPASRLPIKNCVV 450
>gi|17989031|ref|NP_541664.1| ATP-dependent DNA helicase RecG [Brucella melitensis bv. 1 str.
16M]
gi|237817109|ref|ZP_04596101.1| ATP-dependent DNA helicase RecG [Brucella abortus str. 2308 A]
gi|17984872|gb|AAL53928.1| ATP-dependent DNA helicase recg [Brucella melitensis bv. 1 str.
16M]
gi|237787922|gb|EEP62138.1| ATP-dependent DNA helicase RecG [Brucella abortus str. 2308 A]
Length = 714
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 145/396 (36%), Positives = 197/396 (49%), Gaps = 57/396 (14%)
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRD 399
GE V VSGKV +Y I + D L L P+YP GL+ L
Sbjct: 134 GETVIVSGKVEWFNGRASMVHPDY-IASMDDAASLPLVE-----PVYPLTAGLSPKTLGR 187
Query: 400 TIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA-----RKRLIFD 454
I AL +P + + + G A +HQP+ D D+A R+RL +D
Sbjct: 188 AIKEALTRVPVLPEWIDAPLLAREGFPAFQQALNTLHQPE--DPGDIALESITRRRLAYD 245
Query: 455 EFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTS 514
EF QL L + + RL+ +EG ++ +++R LPY LT
Sbjct: 246 EFLAGQLALA----------------LVRAKTRRLSGRPLEGTGNIVAEIMRHLPYRLTK 289
Query: 515 SQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLAT 574
+Q A+ EII DLK P M RLLQGDVG GKTVV L+ SG Q+A M PTE+LA
Sbjct: 290 AQEQAVREIITDLKSPQRMLRLLQGDVGSGKTVVGLLSMAHAAESGGQSALMAPTEVLAR 349
Query: 575 QHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKV 634
QH+ + L +K K ALLTG ++ + + L++G+I +VIGTH+L EKV
Sbjct: 350 QHFATIAPL-----AEKAGLKAALLTGREKGRERNAVLEGLKSGEIDIVIGTHALFQEKV 404
Query: 635 EFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMS 694
E+ L I+DEQ RFGV QR M+ + GS AP +L M+
Sbjct: 405 EYHDLVFVIIDEQHRFGVHQR----------------LMLTAKGS-------APDMLVMT 441
Query: 695 ATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
ATPIPRTL L +GDM ++++T+ P GR PI T I+
Sbjct: 442 ATPIPRTLVLTAFGDMDVSKLTEKPVGRQPITTAIV 477
>gi|149277295|ref|ZP_01883437.1| ATP-dependent DNA helicase [Pedobacter sp. BAL39]
gi|149232172|gb|EDM37549.1| ATP-dependent DNA helicase [Pedobacter sp. BAL39]
Length = 701
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 130/364 (35%), Positives = 191/364 (52%), Gaps = 56/364 (15%)
Query: 381 RPYPIYPSKGGLNASLLRDTIARALQALPAN------FDPVPKEITQEFGLLCLFDAYMG 434
R P+Y S L L + LQ L + +P + Q++ ++ A +
Sbjct: 149 RLQPVYNSTEKLKKFFLDSKGIQKLQTLIIEQHLSEIRETLPMPVLQKYQMVSRKQALLN 208
Query: 435 IHQPKHIDEADLARKRLIFDEFFYLQLGRLY----QMLEGLGTQFEKEGLLDKYRKPRLN 490
IH PK ++ A +RL F+E F++QL L+ + L+ G +FE G R+N
Sbjct: 209 IHFPKDVEALKAAERRLKFEELFFIQLQLLHNKKLRELKFKGHRFEAVG-------SRVN 261
Query: 491 AAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAF 550
Y + LP+ +T +Q I EI D ++ + MNRL+QGDVG GKTVVA
Sbjct: 262 TFYKD-----------ILPFEMTGAQKRVIKEIRMDTQRGIQMNRLVQGDVGSGKTVVAL 310
Query: 551 LACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRM 610
++ + +G+QA M PTE+LA QH+E + LLD K+A+LTGST KQ
Sbjct: 311 MSMLLANDNGFQACMMAPTEILARQHHESITSLLDG-----KLSKVAVLTGSTTKKQRTK 365
Query: 611 IRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSG 670
+ +LQ G+I +++GTH+LI +KV F L + ++DEQ RFGV QR + K
Sbjct: 366 LHAELQNGEIDILVGTHALIEDKVVFKNLGMVVIDEQHRFGVEQRAKLWRK--------- 416
Query: 671 MAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT-YI 729
+ PH+L M+ATPIPRTLA+ LYGD+ ++ I +LP GR PI+T +
Sbjct: 417 -------------NTVPPHILVMTATPIPRTLAMTLYGDLDVSVIDELPVGRKPIETRHF 463
Query: 730 IEGN 733
EG
Sbjct: 464 FEGQ 467
>gi|421218333|ref|ZP_15675227.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2070335]
gi|395583102|gb|EJG43551.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2070335]
Length = 589
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 162/533 (30%), Positives = 257/533 (48%), Gaps = 101/533 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWS 498
+ E A +R+ F+E FY Q+ L+ L ++ + GL+ + + ++ A +
Sbjct: 197 LAEYKQALRRIKFEELFYFQM-----QLQTLKSENRVQGSGLVLNWSQEKVTAVKV---- 247
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
+LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA +
Sbjct: 248 --------SLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVT 299
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+GYQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G
Sbjct: 300 AGYQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKG 352
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+ L+IGTH+LI + VE++ L L I+DEQ RFGV QR K
Sbjct: 353 EADLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK----------------- 395
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
D+ P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 396 --GDN----PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|319640606|ref|ZP_07995325.1| ATP-dependent DNA helicase RecG [Bacteroides sp. 3_1_40A]
gi|345517937|ref|ZP_08797397.1| ATP-dependent DNA helicase RecG [Bacteroides sp. 4_3_47FAA]
gi|423313748|ref|ZP_17291684.1| ATP-dependent DNA helicase RecG [Bacteroides vulgatus CL09T03C04]
gi|254835135|gb|EET15444.1| ATP-dependent DNA helicase RecG [Bacteroides sp. 4_3_47FAA]
gi|317387776|gb|EFV68636.1| ATP-dependent DNA helicase RecG [Bacteroides sp. 3_1_40A]
gi|392684683|gb|EIY78007.1| ATP-dependent DNA helicase RecG [Bacteroides vulgatus CL09T03C04]
Length = 698
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 133/344 (38%), Positives = 187/344 (54%), Gaps = 50/344 (14%)
Query: 389 KGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA 447
+G LN+ L + AL L + +P + +E L+ L +A IH PK+ + A
Sbjct: 159 RGFLNSHGLEKLMKNALALLQEPLAETLPPRLVEEHHLMSLDEAIRNIHFPKNPELLRKA 218
Query: 448 RKRLIFDEFFYLQLGRLY----QMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
+ RL F+E FY+QL L + + G +FE+ G + N Y +
Sbjct: 219 QYRLKFEELFYVQLNILRYSKDRQRKYRGLRFERVGEI-------FNTFYSQN------- 264
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
LP+ LT +Q I EI D+ MNRLLQGDVG GKT+VA ++ + + +GYQA
Sbjct: 265 ----LPFELTGAQKRVIKEIRKDMGSGRQMNRLLQGDVGSGKTLVALMSMLIALDNGYQA 320
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
M PTE+LA QHYE + K L M+ ++ LL GS K+ I KDL TGD+ ++
Sbjct: 321 CMMAPTEILAAQHYETIRKFLFGMD-----VRVELLMGSVKGKKREKILKDLLTGDVQIL 375
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
IGTH+++ + V FS+L + I+DEQ RFGV QR + SK + P
Sbjct: 376 IGTHAVLEDTVGFSSLGMVIIDEQHRFGVAQRAKLWSK---------------NVCP--- 417
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
PHVL M+ATPIPRTLA+ LYGD+ ++ I +LPPGR PI+T
Sbjct: 418 ----PHVLVMTATPIPRTLAMTLYGDLDVSVIDELPPGRKPIQT 457
>gi|374374875|ref|ZP_09632533.1| ATP-dependent DNA helicase RecG [Niabella soli DSM 19437]
gi|373231715|gb|EHP51510.1| ATP-dependent DNA helicase RecG [Niabella soli DSM 19437]
Length = 686
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 152/424 (35%), Positives = 210/424 (49%), Gaps = 82/424 (19%)
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNN---HYEMREYNIDVLKDEDDLSLRAKG 380
F SI +K I G+ V GKV H EM ++ + LK +D L
Sbjct: 84 FQSINLIKKIVHP---GQPYLVYGKVSFFMGKPQMVHPEMEPWDPEKLKGKDFLE----- 135
Query: 381 RPYPIYPSK-------------GGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLC 427
P+YPS G L A+LL+ R + P N +P+ + +E L+
Sbjct: 136 ---PVYPSTEKLKTKNLGGRQVGKLTATLLQHLSERDI---PEN---LPQPLREELKLIP 186
Query: 428 LFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLG----RLYQMLEGLGTQFEKEGLLDK 483
F AY IH PK+ + + A +RL F+E F+ QL R + G FEK G L
Sbjct: 187 RFPAYQQIHFPKNKEAYEAAVRRLKFEEIFFAQLRMNLLRSERHRFSKGVVFEKVGDL-- 244
Query: 484 YRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGC 543
N Y E LP+ LT++Q + EI D + MNRLLQGDVG
Sbjct: 245 -----FNRFYSE-----------CLPFELTNAQKRVLKEIRIDTGRGKQMNRLLQGDVGS 288
Query: 544 GKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGST 603
GKTVVA L + +GYQ+ M PTE+LA QH++ + +LL+ + +A+LTG+T
Sbjct: 289 GKTVVALLCMLLAADNGYQSVLMAPTEILARQHFQGIKELLEPL-----PVTVAILTGTT 343
Query: 604 PVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLY 663
K+ R++ + L G+I ++IGTH++I + V F L L I+DEQ RFGV QR R K
Sbjct: 344 KGKERRLLLEQLANGEINILIGTHAVIEDPVVFQNLGLVIIDEQHRFGVAQRARLWEKAI 403
Query: 664 YTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRI 723
+ PHVL M+ATPIPRTLA+ YGD+ + I +LPPGR
Sbjct: 404 ----------------------IPPHVLVMTATPIPRTLAMTAYGDLDYSVIDELPPGRK 441
Query: 724 PIKT 727
PI+T
Sbjct: 442 PIQT 445
>gi|148558658|ref|YP_001257569.1| ATP-dependent DNA helicase RecG [Brucella ovis ATCC 25840]
gi|148369943|gb|ABQ62815.1| ATP-dependent DNA helicase RecG [Brucella ovis ATCC 25840]
Length = 706
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 162/488 (33%), Positives = 227/488 (46%), Gaps = 79/488 (16%)
Query: 257 GQYFIFIGEIISSRGMKAGCSFSFLEVIVGCE-IADTETTSGDEVVNI--------DSGQ 307
GQ I R + G +F+ IV E I D + N+ D+G+
Sbjct: 47 GQLLFLPPHSIIDRRNRPGIAFAQEGAIVTLEVIVDQRQPAPKGRGNVPHRVFAHDDTGE 106
Query: 308 KKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDV 367
+ H +P+L+ + + GE V VSGKV +Y I
Sbjct: 107 IALTFFH----------AQLPWLQKMLPE---GETVIVSGKVEWFNGRASMVHPDY-IAS 152
Query: 368 LKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLC 427
+ D L L P+YP GL+ L I AL +P + + + G
Sbjct: 153 MDDAASLPLVE-----PVYPLTAGLSPKTLGRAIKEALTRVPVLPEWIDAPLLAREGFPA 207
Query: 428 LFDAYMGIHQPKHIDEADLA-----RKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLD 482
A +HQP+ D D+A R+RL +DEF QL L
Sbjct: 208 FQQALNTLHQPE--DPGDIALESITRRRLAYDEFLAGQLALA----------------LV 249
Query: 483 KYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVG 542
+ + RL+ +EG ++ +++R LPY LT +Q A+ EII DLK P M RLLQGDVG
Sbjct: 250 RAKTRRLSGRPLEGTGNIVAEIMRHLPYRLTKAQEQAVREIITDLKSPQRMLRLLQGDVG 309
Query: 543 CGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGS 602
GKTVV L+ SG Q+A M PTE+LA QH+ + L +K K ALLTG
Sbjct: 310 SGKTVVGLLSMAHAAESGGQSALMAPTEVLARQHFATIAPL-----AEKAGLKAALLTGR 364
Query: 603 TPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKL 662
++ + + L++G+I +VIGTH+L EKVE+ L I+DEQ RFGV QR
Sbjct: 365 EKGRERNAVLEGLKSGEIDIVIGTHALFQEKVEYHDLVFVIIDEQHRFGVHQR------- 417
Query: 663 YYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGR 722
M+ + GS AP +L M+ATPIPRTL L +GDM ++++T+ P GR
Sbjct: 418 ---------LMLTAKGS-------APDMLVMTATPIPRTLVLTAFGDMDVSKLTEKPVGR 461
Query: 723 IPIKTYII 730
PI T I+
Sbjct: 462 QPITTAIV 469
>gi|429735419|ref|ZP_19269384.1| ATP-dependent DNA helicase RecG [Selenomonas sp. oral taxon 138
str. F0429]
gi|429158927|gb|EKY01453.1| ATP-dependent DNA helicase RecG [Selenomonas sp. oral taxon 138
str. F0429]
Length = 688
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 155/531 (29%), Positives = 251/531 (47%), Gaps = 85/531 (16%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN----AQIDLDDGQYFIF 262
L I+ V G+ + G T+ LL ++PR Y D AQ+ + +
Sbjct: 3 LSDSINKVRGVGVKKAAAFARLGIQTVYDLLTYYPRAYEDQSRVTPIAQLRAGERATVLA 62
Query: 263 IGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGT 322
+ + ++ R + F+ L ++G E +G + ++ + +
Sbjct: 63 VIQRVTERQARR-RGFTVLTALLGDE----------------TGYAQAVWFNQR------ 99
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNI---DVLKDEDDLSLRAK 379
FLK+ K + G + ++GK N ++ NI ++L E+D
Sbjct: 100 ------FLKT---KLREGRRILLTGKA-DYAYNGGGQLALTNITSFELLGAEEDAGEHLG 149
Query: 380 GRPYPIYPSKGGLNASLLRDTIARAL-QALPANFDPVPKEITQEFGLLCLFDAYMGIHQP 438
P+Y + GL LR + L Q + + +P+ + +E+ L+ A+ IH P
Sbjct: 150 --ILPVYAATEGLTQKQLRAMMEYVLLQTVDELEENLPQRVREEYRLIGRRSAFRHIHFP 207
Query: 439 KHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWS 498
K +E AR+RL F+E + +Q G L T E+EG+ P
Sbjct: 208 KEEEELRTARRRLAFEELYLIQCGLLALKKR---TAEEQEGIAHS---PN---------G 252
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
+L +++ ALP++LT+ Q EI D++ P+PM RL+QGDVG GKT +A LA ++ +
Sbjct: 253 ALVERVRAALPFTLTADQGQVWGEITHDMESPLPMRRLVQGDVGSGKTAIALLALVKTVE 312
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
SG+Q A M PTE+LA QHY++L +LL + ++ L+G K+ + L
Sbjct: 313 SGHQGAMMAPTEILARQHYDYLRELLTPL-----GVRVGFLSGRLTKKERTAMDAALAVH 367
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
++ + +GTH+LI + V F+AL L + DEQ RFGV QR K T
Sbjct: 368 EVDIAVGTHALIQDHVAFAALGLVVTDEQHRFGVAQRAELEKKSERT------------- 414
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYI 729
P VL M+ATPIPRT+ L +YGD+ +++I LPPGR PI+T++
Sbjct: 415 ---------PDVLVMTATPIPRTMTLTVYGDLDVSRIEHLPPGRQPIRTFL 456
>gi|315223950|ref|ZP_07865795.1| DNA helicase RecG [Capnocytophaga ochracea F0287]
gi|420158749|ref|ZP_14665563.1| ATP-dependent DNA helicase RecG [Capnocytophaga ochracea str. Holt
25]
gi|314946122|gb|EFS98126.1| DNA helicase RecG [Capnocytophaga ochracea F0287]
gi|394763236|gb|EJF45356.1| ATP-dependent DNA helicase RecG [Capnocytophaga ochracea str. Holt
25]
Length = 724
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 128/355 (36%), Positives = 195/355 (54%), Gaps = 57/355 (16%)
Query: 384 PIYPS-----KGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQ 437
P+YPS K + ++R + + + +F + +P I L+ +A IH
Sbjct: 174 PVYPSTEKLAKRNITNRVMRQLVQTVFEEIGNSFAENLPDNILASMNLISKQEAMRNIHF 233
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYR---KPRLNA--A 492
P + A RL F+E FY+Q+ Q ++ LL K + +P N A
Sbjct: 234 PTNQTLLTKASVRLKFEELFYIQV------------QLVRKNLLHKQKFQGQPFKNVGDA 281
Query: 493 YMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLA 552
+M ++ LP+ LT +Q + EI D+ MNRLLQGDVG GKT+VA +
Sbjct: 282 FMNFYN-------HHLPFPLTDAQKRVLKEIRADVGSNAQMNRLLQGDVGSGKTIVALMT 334
Query: 553 CMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIR 612
+ + +G QA M PTE+LA QHY+++ +LL + +ALLTGS+ K+ +M+
Sbjct: 335 MLLAVDNGCQACLMAPTEILANQHYQNISELL-----KETGVTVALLTGSSKTKERKMLD 389
Query: 613 KDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMA 672
+ LQ+G+++++IGTH+L+ KV+F L LAI+DEQ RFGV QR SKL++ +
Sbjct: 390 EQLQSGELSILIGTHALLENKVQFRNLGLAIIDEQHRFGVEQR----SKLWHKNT----- 440
Query: 673 MVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PH+L M+ATPIPRTLA+++YGD+ ++ I +LPPGR PIKT
Sbjct: 441 -------------IPPHILVMTATPIPRTLAMSVYGDLDVSIIDELPPGRKPIKT 482
>gi|150003059|ref|YP_001297803.1| ATP-dependent DNA helicase RecG [Bacteroides vulgatus ATCC 8482]
gi|294775914|ref|ZP_06741413.1| ATP-dependent DNA helicase RecG [Bacteroides vulgatus PC510]
gi|149931483|gb|ABR38181.1| ATP-dependent DNA helicase RecG [Bacteroides vulgatus ATCC 8482]
gi|294450283|gb|EFG18784.1| ATP-dependent DNA helicase RecG [Bacteroides vulgatus PC510]
Length = 698
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 133/344 (38%), Positives = 187/344 (54%), Gaps = 50/344 (14%)
Query: 389 KGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA 447
+G LN+ L + AL L + +P + +E L+ L +A IH PK+ + A
Sbjct: 159 RGFLNSHGLEKLMKNALALLQEPLAETLPPRLVEEHHLMSLDEAIRNIHFPKNPELLRKA 218
Query: 448 RKRLIFDEFFYLQLGRLY----QMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
+ RL F+E FY+QL L + + G +FE+ G + N Y +
Sbjct: 219 QYRLKFEELFYVQLNILRYSKDRQRKYRGLRFERVGEI-------FNTFYSQN------- 264
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
LP+ LT +Q I EI D+ MNRLLQGDVG GKT+VA ++ + + +GYQA
Sbjct: 265 ----LPFELTGAQKRVIKEIRKDMGSGRQMNRLLQGDVGSGKTLVALMSMLIALDNGYQA 320
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
M PTE+LA QHYE + K L M+ ++ LL GS K+ I KDL TGD+ ++
Sbjct: 321 CMMAPTEILAAQHYETIRKFLFGMD-----VRVELLMGSVKGKKREKILKDLLTGDVQIL 375
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
IGTH+++ + V FS+L + I+DEQ RFGV QR + SK + P
Sbjct: 376 IGTHAVLEDTVGFSSLGMVIIDEQHRFGVAQRAKLWSK---------------NVCP--- 417
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
PHVL M+ATPIPRTLA+ LYGD+ ++ I +LPPGR PI+T
Sbjct: 418 ----PHVLVMTATPIPRTLAMTLYGDLDVSVIDELPPGRKPIQT 457
>gi|418146937|ref|ZP_12783715.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA13637]
gi|419482732|ref|ZP_14022519.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA40563]
gi|419495878|ref|ZP_14035595.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47461]
gi|421234584|ref|ZP_15691202.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2061617]
gi|421249925|ref|ZP_15706382.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2082239]
gi|421302836|ref|ZP_15753500.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA17484]
gi|353812512|gb|EHD92747.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA13637]
gi|379579324|gb|EHZ44231.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA40563]
gi|379593964|gb|EHZ58775.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47461]
gi|395600438|gb|EJG60595.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2061617]
gi|395613619|gb|EJG73647.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2082239]
gi|395901458|gb|EJH12394.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA17484]
Length = 671
Score = 208 bits (530), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 163/532 (30%), Positives = 254/532 (47%), Gaps = 99/532 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ L+ L ++ +G + + WS
Sbjct: 197 LAEYKQALRRIKFEELFYFQM-----QLQTLKSENRIQG-----------SGLVLDWSQE 240
Query: 501 TKKLLRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
++A LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +
Sbjct: 241 KVTAVKASLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTA 300
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
GYQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+
Sbjct: 301 GYQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGE 353
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 354 ADLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN- 398
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 --------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|422852243|ref|ZP_16898913.1| DNA helicase RecG [Streptococcus sanguinis SK150]
gi|325693569|gb|EGD35488.1| DNA helicase RecG [Streptococcus sanguinis SK150]
Length = 671
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 160/530 (30%), Positives = 256/530 (48%), Gaps = 95/530 (17%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + ++ +PG+ + + G TL+ LL +FP Y D ++ + DL+DG+ + G+
Sbjct: 3 LHQPLTVLPGVGPKSAEKFTKLGLETLQDLLLYFPFRYEDFKSKNVLDLEDGEKAVVSGQ 62
Query: 266 IISSRGMKA-GCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
+++ ++ G + L + G+ V+ ++ F
Sbjct: 63 VVTPANVQYYGYKRNRLRFTI---------KQGEVVLAVN-------------------F 94
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY 383
+ P+L K +VG V V GK +A S ++ + + EDDL
Sbjct: 95 FNQPYLAD---KIEVGANVAVFGKWDKAKASLTGMKL------LAQVEDDLQ-------- 137
Query: 384 PIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHI 441
P+Y G++ + L I A Q L + +P+ + + + L+ +A +H PK +
Sbjct: 138 PVYRLAQGISQASLVKLIKTAFDQGLDLLLEENLPQPLLERYQLVSRVEAVRAMHFPKDL 197
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
+ A +R+ F+E FY Q+ Q + +L + K N ++ S
Sbjct: 198 ADYKQALRRVKFEELFYFQM------------QLQ---VLKRETKAVSNGLKIDWQSDAV 242
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
+ ++LP+ LTS+Q +++EI+ DL+ P MNRLLQGDVG GKTVVA LA V +G+
Sbjct: 243 AEKKQSLPFELTSAQERSLTEILHDLRSPGHMNRLLQGDVGSGKTVVAGLAMYAVYTAGF 302
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q+A MVPTE+LA QH++ L +L + K+ALLTG + R ++ G +
Sbjct: 303 QSALMVPTEILAEQHFDSLAQLFPEL-------KLALLTGGMKAAERRETLAAIENGQVD 355
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+++GTH+LI E V + AL L I+DEQ RFGV QR K D
Sbjct: 356 MIVGTHALIQEGVRYHALGLVIIDEQHRFGVEQRRILREK--------------GDN--- 398
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T ++
Sbjct: 399 ------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIITRWVK 442
>gi|261217197|ref|ZP_05931478.1| ATP-dependent DNA helicase RecG [Brucella ceti M13/05/1]
gi|261320068|ref|ZP_05959265.1| ATP-dependent DNA helicase RecG [Brucella ceti M644/93/1]
gi|260922286|gb|EEX88854.1| ATP-dependent DNA helicase RecG [Brucella ceti M13/05/1]
gi|261292758|gb|EEX96254.1| ATP-dependent DNA helicase RecG [Brucella ceti M644/93/1]
Length = 706
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 145/396 (36%), Positives = 197/396 (49%), Gaps = 57/396 (14%)
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRD 399
GE V VSGKV +Y I + D L L P+YP GL+ L
Sbjct: 126 GETVIVSGKVEWFNGRASMVHPDY-IASMDDAASLPLVE-----PVYPLTAGLSPKTLGR 179
Query: 400 TIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA-----RKRLIFD 454
I AL +P + + + G A +HQP+ D D+A R+RL +D
Sbjct: 180 AIKEALTRVPVLPEWIDAPLLAREGFPAFQQALNTLHQPE--DPGDIALESITRRRLAYD 237
Query: 455 EFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTS 514
EF QL L + + RL+ +EG ++ +++R LPY LT
Sbjct: 238 EFLAGQLALA----------------LVRAKTRRLSGRPLEGTGNIVAEIMRHLPYRLTK 281
Query: 515 SQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLAT 574
+Q A+ EII DLK P M RLLQGDVG GKTVV L+ SG Q+A M PTE+LA
Sbjct: 282 AQEQAVREIITDLKSPQRMLRLLQGDVGSGKTVVGLLSMAHAAESGGQSALMAPTEVLAR 341
Query: 575 QHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKV 634
QH+ + L +K K ALLTG ++ + + L++G+I +VIGTH+L EKV
Sbjct: 342 QHFATIAPL-----AEKAGLKAALLTGREKGRERNAVLEGLKSGEIDIVIGTHALFQEKV 396
Query: 635 EFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMS 694
E+ L I+DEQ RFGV QR M+ + GS AP +L M+
Sbjct: 397 EYHDLVFVIIDEQHRFGVHQR----------------LMLTAKGS-------APDMLVMT 433
Query: 695 ATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
ATPIPRTL L +GDM ++++T+ P GR PI T I+
Sbjct: 434 ATPIPRTLVLTAFGDMDVSKLTEKPVGRQPITTAIV 469
>gi|148989348|ref|ZP_01820716.1| hypothetical protein CGSSp6BS73_07619 [Streptococcus pneumoniae
SP6-BS73]
gi|149021207|ref|ZP_01835453.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae
SP23-BS72]
gi|418103385|ref|ZP_12740457.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae NP070]
gi|419487171|ref|ZP_14026933.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA44128]
gi|421207128|ref|ZP_15664180.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2090008]
gi|421209462|ref|ZP_15666475.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2070005]
gi|421225528|ref|ZP_15682266.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2070768]
gi|421230309|ref|ZP_15686973.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2061376]
gi|421241157|ref|ZP_15697702.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2080913]
gi|421312505|ref|ZP_15763107.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA58981]
gi|147925098|gb|EDK76178.1| hypothetical protein CGSSp6BS73_07619 [Streptococcus pneumoniae
SP6-BS73]
gi|147930308|gb|EDK81292.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae
SP23-BS72]
gi|353774686|gb|EHD55173.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae NP070]
gi|379585540|gb|EHZ50396.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA44128]
gi|395573558|gb|EJG34148.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2070005]
gi|395574464|gb|EJG35042.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2090008]
gi|395589015|gb|EJG49337.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2070768]
gi|395593835|gb|EJG54077.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2061376]
gi|395607535|gb|EJG67632.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2080913]
gi|395909359|gb|EJH20235.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA58981]
Length = 671
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 163/532 (30%), Positives = 254/532 (47%), Gaps = 99/532 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ L+ L ++ +G + + WS
Sbjct: 197 LAEYKQALRRIKFEELFYFQM-----QLQTLKSENRVQG-----------SGLVLDWSQE 240
Query: 501 TKKLLRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
++A LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +
Sbjct: 241 KVTAVKASLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTA 300
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
GYQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+
Sbjct: 301 GYQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGE 353
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 354 ADLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN- 398
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 --------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|261313354|ref|ZP_05952551.1| ATP-dependent DNA helicase RecG [Brucella pinnipedialis M163/99/10]
gi|261302380|gb|EEY05877.1| ATP-dependent DNA helicase RecG [Brucella pinnipedialis M163/99/10]
Length = 706
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 145/396 (36%), Positives = 197/396 (49%), Gaps = 57/396 (14%)
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRD 399
GE V VSGKV +Y I + D L L P+YP GL+ L
Sbjct: 126 GETVIVSGKVEWFNGRASMVHPDY-IASMDDAASLPLVE-----PVYPLTAGLSPKTLGR 179
Query: 400 TIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA-----RKRLIFD 454
I AL +P + + + G A +HQP+ D D+A R+RL +D
Sbjct: 180 AIKEALTRVPVLPEWIDAPLLAREGFPAFQQALNTLHQPE--DPGDIALESITRRRLAYD 237
Query: 455 EFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTS 514
EF QL L + + RL+ +EG ++ +++R LPY LT
Sbjct: 238 EFLAGQLALA----------------LVRAKTRRLSGRPLEGTGNIVAEIMRHLPYRLTK 281
Query: 515 SQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLAT 574
+Q A+ EII DLK P M RLLQGDVG GKTVV L+ SG Q+A M PTE+LA
Sbjct: 282 AQEQAVREIITDLKSPQRMLRLLQGDVGSGKTVVGLLSMAHAAESGGQSALMAPTEVLAR 341
Query: 575 QHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKV 634
QH+ + L +K K ALLTG ++ + + L++G+I +VIGTH+L EKV
Sbjct: 342 QHFATIAPL-----AEKAGLKAALLTGREKGRERNAVLEGLKSGEIDIVIGTHALFQEKV 396
Query: 635 EFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMS 694
E+ L I+DEQ RFGV QR M+ + GS AP +L M+
Sbjct: 397 EYHDLVFVIIDEQHRFGVHQR----------------LMLTAKGS-------APDMLVMT 433
Query: 695 ATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
ATPIPRTL L +GDM ++++T+ P GR PI T I+
Sbjct: 434 ATPIPRTLVLTAFGDMDVSKLTEKPVGRQPITTAIV 469
>gi|228473081|ref|ZP_04057838.1| ATP-dependent DNA helicase RecG [Capnocytophaga gingivalis ATCC
33624]
gi|228275663|gb|EEK14440.1| ATP-dependent DNA helicase RecG [Capnocytophaga gingivalis ATCC
33624]
Length = 698
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 135/355 (38%), Positives = 193/355 (54%), Gaps = 48/355 (13%)
Query: 379 KGRPYPIYPS-----KGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAY 432
+G +YPS K G+ ++R I Q + NF + +P ++ LL +A
Sbjct: 144 QGNIQAVYPSTEKLTKKGITQKVIRKLIESLFQEVGKNFFETLPPQLLTSLRLLPKGEAL 203
Query: 433 MGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAA 492
IH P+ + A+ RL +E FY+QL Q ++ L+K K
Sbjct: 204 FQIHFPQSQELLSKAQFRLKLEELFYIQL------------QLIQKNYLNKKLKGYPFPL 251
Query: 493 YMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLA 552
+ +++ K LP+ LT++Q I EI D+ MNRLLQGDVG GKT+VA A
Sbjct: 252 VGDYFNTFYHK---HLPFPLTNAQKRVIKEIRSDMATGAQMNRLLQGDVGAGKTIVALFA 308
Query: 553 CMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIR 612
+ + + YQA M PTE+LA QHY+ + LL M+ ALLTGST K+ R I
Sbjct: 309 MLLALDNQYQACLMAPTEILAQQHYQSIASLLAPMDIQP-----ALLTGSTKTKERRKIL 363
Query: 613 KDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMA 672
++L+ G + +VIGTH+L+ +KV+F L L+I+DEQ RFGV QR SKL++ +
Sbjct: 364 EELENGQLQIVIGTHALLEDKVKFHNLGLSIIDEQHRFGVEQR----SKLWHKNA----- 414
Query: 673 MVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PHVL MSATPIPRTLA++LYGD+ ++ I +LPPGR PI+T
Sbjct: 415 -------------LPPHVLIMSATPIPRTLAMSLYGDLDVSVIDELPPGRKPIQT 456
>gi|295396026|ref|ZP_06806210.1| DNA helicase RecG [Brevibacterium mcbrellneri ATCC 49030]
gi|294971114|gb|EFG47005.1| DNA helicase RecG [Brevibacterium mcbrellneri ATCC 49030]
Length = 737
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 162/533 (30%), Positives = 247/533 (46%), Gaps = 99/533 (18%)
Query: 227 NCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVG 286
N G T+ ++L H PRTY +F GE+ ++ + V++G
Sbjct: 24 NLGLSTVDQVLRHVPRTY----------------LFPGELTPMEELEPDTT----AVVLG 63
Query: 287 CEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI-------PFL-KSIEGKHK 338
+V+++D + + L K G R+T++ P+L K++E
Sbjct: 64 ------------KVLSVDLIRLRDRKRSLTKVKLGGRYTAVHLTFFNMPWLAKNLE---- 107
Query: 339 VGEFVCVSGKV------------RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
+G+ + VSGKV R + SN + E+ + ++ + +P PIY
Sbjct: 108 LGQNLAVSGKVVDTQYGRQINQPRILDSNLELDDGEWGKGSVSMHQEMQMT---KPMPIY 164
Query: 387 PSKGGLNASLLRDTIARALQALP--ANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
KG S + I R L LP A D +P+ + E GL +A GIH+P+ +
Sbjct: 165 SVKGKAKLSTVTRVIHRMLDRLPLEAFEDTMPQHVRSEMGLYSYKEALEGIHRPRDKAQL 224
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
AR+ F+E F LQ + + +K P L A M +
Sbjct: 225 QQAREWFAFEEAFALQ-----------SYMLSNKQVHEKEAAPVLAGAAMGKLDQFDQHQ 273
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
+ LT SQ A +EI DL + PMNRLL GDVG GKT+VA A ++ + SGYQAA
Sbjct: 274 ----TFELTRSQKQAGTEISRDLVRSTPMNRLLHGDVGSGKTLVALRAMLQAVDSGYQAA 329
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKP--KIALLTGSTPVKQSRMIRKDLQTGDITL 622
+ PTE+LATQH L LL + D +I LLTGS ++ + + +L G + +
Sbjct: 330 LLAPTEILATQHVGSLRSLLGELASDGFTDGVRIELLTGSMSGRERKRVATELAAGIVDI 389
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
V+GTH+L+++ F L L ++DEQ RFGV QR + K G K
Sbjct: 390 VVGTHTLLSDTTIFDKLGLVVIDEQHRFGVEQREQLREK----------------GGGK- 432
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
PH L M+ATPIPRT+AL +Y D+ ++ + +LP G + T+++ EK
Sbjct: 433 ----VPHTLVMTATPIPRTVALTVYSDLDVSTLRELPGGPKQVSTHVVPMYEK 481
>gi|298384865|ref|ZP_06994424.1| ATP-dependent DNA helicase RecG [Bacteroides sp. 1_1_14]
gi|383120254|ref|ZP_09940984.1| ATP-dependent DNA helicase RecG [Bacteroides sp. 1_1_6]
gi|251840702|gb|EES68784.1| ATP-dependent DNA helicase RecG [Bacteroides sp. 1_1_6]
gi|298262009|gb|EFI04874.1| ATP-dependent DNA helicase RecG [Bacteroides sp. 1_1_14]
Length = 698
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 150/437 (34%), Positives = 222/437 (50%), Gaps = 65/437 (14%)
Query: 303 IDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIE---GKHKVGEFVCVSGKVRAMRSNNHYE 359
I G+++++ H F GT + + + I+ GK+K+ E + GK N
Sbjct: 74 IGEGRQRRLTAH---FSDGTGIVDLVWFQGIKYILGKYKLHEEYIIFGKPTVF--NGRIN 128
Query: 360 MREYNIDVLKDEDDLSLRAKG-RPYPIYPSK---GGLNASLLRDTIARALQALPANFDPV 415
+ +ID DDL L + G +PY K LN+ + +A +Q + +P+
Sbjct: 129 VAHPDID---KPDDLKLSSVGLQPYYNTTEKMKRSFLNSHAIEKMMATVIQQIQ---EPL 182
Query: 416 PK----EITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGL 471
P+ +I + L+ L +A IH P + D A+ RL F+E FY+QL L
Sbjct: 183 PETLSPKILSDHHLMPLTEALRNIHFPTNPDSLRRAQYRLKFEELFYVQLNIL------- 235
Query: 472 GTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLL-RALPYSLTSSQLSAISEIIWDLKQP 530
++ K+ R+ R E + + LP+ LT +Q + EI D+
Sbjct: 236 --RYAKD------RQRRYRGYIFERVGDVFNTFYSQNLPFQLTGAQKRVLKEIRNDVGSG 287
Query: 531 VPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEED 590
MNRLLQGDVG GKT+VA ++ + + +G+QA M PTE+LA QHYE + +LL M+
Sbjct: 288 RQMNRLLQGDVGSGKTLVALMSMLLALDNGFQACMMAPTEILANQHYETIKELLFGMD-- 345
Query: 591 KHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRF 650
++ LLTGS K+ I L TGD+ ++IGTH++I + V FS+L L ++DEQ RF
Sbjct: 346 ---IRVELLTGSIKGKKREAILTGLLTGDVKILIGTHAVIEDTVNFSSLGLVVIDEQHRF 402
Query: 651 GVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDM 710
GV QR R +K PHVL M+ATPIPRTLA+ LYGD+
Sbjct: 403 GVAQRARLWTK----------------------NIQPPHVLVMTATPIPRTLAMTLYGDL 440
Query: 711 SLTQITDLPPGRIPIKT 727
++ I +LPPGR PI T
Sbjct: 441 DVSVIDELPPGRKPITT 457
>gi|290957125|ref|YP_003488307.1| ATP-dependent DNA helicase [Streptomyces scabiei 87.22]
gi|260646651|emb|CBG69748.1| putative ATP-dependent DNA helicase [Streptomyces scabiei 87.22]
Length = 751
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 157/558 (28%), Positives = 244/558 (43%), Gaps = 100/558 (17%)
Query: 210 CISCVPGLSKRLYHQL---------ENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQ 258
+ VP L + L + L E+ G +T+ LLHH+PR Y + DL +
Sbjct: 5 AMDPVPALEEPLKNSLGAATAKVMAEHLGLHTVGDLLHHYPRRYEERGRLTRLADLPMDE 64
Query: 259 YFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKF 318
+ + ++ +R L + + + + SG+ + ++
Sbjct: 65 HVTVVAQVADAR----------LHTFASAKAPRGKGQRLEVTITDGSGRLQLVF------ 108
Query: 319 FRGTRFTSIPFLKSIEGKHK---VGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLS 375
F + HK G +GKV N ++ ++L+ E D
Sbjct: 109 ----------FGHGVHKPHKDLLPGTRALFAGKVSVF--NRRLQLAHPAYELLRGEGDSE 156
Query: 376 LRAK-----GRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFD 430
G PIYP+ L + + + L + DP+P + + GL+ L D
Sbjct: 157 DTETVGTWAGALIPIYPATAKLESWKIAKAVQTVLPSAQEAVDPLPDSLREGRGLVSLPD 216
Query: 431 AYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQ-----MLEGLGTQFEKEGLLDKYR 485
A + IH+P + D AR RL +DE F LQ+ + L + + +GLL +
Sbjct: 217 ALVKIHRPHTKADRDSARDRLKWDEAFVLQVALARRRHADSQLPAVARRPASDGLLTAFD 276
Query: 486 KPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGK 545
LP++LT Q EI DL PM+RLLQG+VG GK
Sbjct: 277 A--------------------RLPFTLTDGQRKVSREIFDDLATEHPMHRLLQGEVGSGK 316
Query: 546 TVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEE------DKHKPKIALL 599
T+VA A + V+ +G QAA + PTE+LA QH+ + +++ + E +H K+ LL
Sbjct: 317 TLVALRAMLAVVDAGGQAAMLAPTEVLAQQHHRSVTEMMGELAEGGMLGGSEHATKVVLL 376
Query: 600 TGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFN 659
TGS R DL TG+ +VIGTH+LI +KV+F L L +VDEQ RFGV QR
Sbjct: 377 TGSMGAAGRRQALLDLVTGEAGIVIGTHALIEDKVQFHDLGLVVVDEQHRFGVEQRDALR 436
Query: 660 SKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLP 719
K PH+L M+ATPIPRT+A+ ++GD+ + + LP
Sbjct: 437 GK----------------------GKQPPHLLVMTATPIPRTVAMTVFGDLDTSVLDQLP 474
Query: 720 PGRIPIKTYIIEGNEKGY 737
GR PI ++++ +K +
Sbjct: 475 AGRSPIASHVVPAADKPH 492
>gi|261220417|ref|ZP_05934698.1| ATP-dependent DNA helicase RecG [Brucella ceti B1/94]
gi|261318742|ref|ZP_05957939.1| ATP-dependent DNA helicase RecG [Brucella pinnipedialis B2/94]
gi|261756787|ref|ZP_06000496.1| ATP-dependent DNA helicase RecG [Brucella sp. F5/99]
gi|265986540|ref|ZP_06099097.1| ATP-dependent DNA helicase RecG [Brucella pinnipedialis M292/94/1]
gi|265996232|ref|ZP_06108789.1| ATP-dependent DNA helicase RecG [Brucella ceti M490/95/1]
gi|340792365|ref|YP_004757829.1| ATP-dependent DNA helicase RecG [Brucella pinnipedialis B2/94]
gi|260919001|gb|EEX85654.1| ATP-dependent DNA helicase RecG [Brucella ceti B1/94]
gi|261297965|gb|EEY01462.1| ATP-dependent DNA helicase RecG [Brucella pinnipedialis B2/94]
gi|261736771|gb|EEY24767.1| ATP-dependent DNA helicase RecG [Brucella sp. F5/99]
gi|262550529|gb|EEZ06690.1| ATP-dependent DNA helicase RecG [Brucella ceti M490/95/1]
gi|264658737|gb|EEZ28998.1| ATP-dependent DNA helicase RecG [Brucella pinnipedialis M292/94/1]
gi|340560824|gb|AEK56061.1| ATP-dependent DNA helicase RecG [Brucella pinnipedialis B2/94]
Length = 706
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 145/396 (36%), Positives = 197/396 (49%), Gaps = 57/396 (14%)
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRD 399
GE V VSGKV +Y I + D L L P+YP GL+ L
Sbjct: 126 GETVIVSGKVEWFNGRASMVHPDY-IASMDDAASLPLVE-----PVYPLTAGLSPKTLGR 179
Query: 400 TIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA-----RKRLIFD 454
I AL +P + + + G A +HQP+ D D+A R+RL +D
Sbjct: 180 AIKEALTRVPVLPEWIDAPLLAREGFPAFQQALNTLHQPE--DPGDIALESITRRRLAYD 237
Query: 455 EFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTS 514
EF QL L + + RL+ +EG ++ +++R LPY LT
Sbjct: 238 EFLAGQLALA----------------LVRAKTRRLSGRPLEGTGNIVAEIMRHLPYRLTK 281
Query: 515 SQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLAT 574
+Q A+ EII DLK P M RLLQGDVG GKTVV L+ SG Q+A M PTE+LA
Sbjct: 282 AQEQAVREIITDLKSPQRMLRLLQGDVGSGKTVVGLLSMAHAAESGGQSALMAPTEVLAR 341
Query: 575 QHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKV 634
QH+ + L +K K ALLTG ++ + + L++G+I +VIGTH+L EKV
Sbjct: 342 QHFATIAPL-----AEKAGLKAALLTGREKGRERNAVLEGLKSGEIDIVIGTHALFQEKV 396
Query: 635 EFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMS 694
E+ L I+DEQ RFGV QR M+ + GS AP +L M+
Sbjct: 397 EYHDLVFVIIDEQHRFGVHQR----------------LMLTAKGS-------APDMLVMT 433
Query: 695 ATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
ATPIPRTL L +GDM ++++T+ P GR PI T I+
Sbjct: 434 ATPIPRTLVLTAFGDMDVSKLTEKPVGRQPITTAIV 469
>gi|260763325|ref|ZP_05875657.1| ATP-dependent DNA helicase RecG [Brucella abortus bv. 2 str.
86/8/59]
gi|260673746|gb|EEX60567.1| ATP-dependent DNA helicase RecG [Brucella abortus bv. 2 str.
86/8/59]
Length = 706
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 145/396 (36%), Positives = 197/396 (49%), Gaps = 57/396 (14%)
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRD 399
GE V VSGKV +Y I + D L L P+YP GL+ L
Sbjct: 126 GETVIVSGKVEWFNGRASMVHPDY-IASMDDAASLPLVE-----PVYPLTAGLSPKTLGR 179
Query: 400 TIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA-----RKRLIFD 454
I AL +P + + + G A +HQP+ D D+A R+RL +D
Sbjct: 180 AIKEALTRVPVLPEWIDAPLLAREGFPAFQQALNTLHQPE--DPGDIALESITRRRLAYD 237
Query: 455 EFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTS 514
EF QL L + + RL+ +EG ++ +++R LPY LT
Sbjct: 238 EFLAGQLALA----------------LVRAKTRRLSGRPLEGTGNIVAEIMRHLPYRLTK 281
Query: 515 SQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLAT 574
+Q A+ EII DLK P M RLLQGDVG GKTVV L+ SG Q+A M PTE+LA
Sbjct: 282 AQEQAVREIITDLKSPQRMLRLLQGDVGSGKTVVGLLSMAHAAESGGQSALMAPTEVLAR 341
Query: 575 QHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKV 634
QH+ + L +K K ALLTG ++ + + L++G+I +VIGTH+L EKV
Sbjct: 342 QHFATIAPL-----AEKAGLKAALLTGREKGRERNAVLEGLKSGEIDIVIGTHALFQEKV 396
Query: 635 EFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMS 694
E+ L I+DEQ RFGV QR M+ + GS AP +L M+
Sbjct: 397 EYHDLVFVIIDEQHRFGVHQR----------------LMLTAKGS-------APDMLVMT 433
Query: 695 ATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
ATPIPRTL L +GDM ++++T+ P GR PI T I+
Sbjct: 434 ATPIPRTLVLTAFGDMDVSKLTEKPVGRQPITTAIV 469
>gi|417687143|ref|ZP_12336417.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA41301]
gi|418160400|ref|ZP_12797099.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA17227]
gi|419521624|ref|ZP_14061219.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA05245]
gi|332074033|gb|EGI84511.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA41301]
gi|353822133|gb|EHE02309.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA17227]
gi|379538924|gb|EHZ04104.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA05245]
Length = 671
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 162/532 (30%), Positives = 254/532 (47%), Gaps = 99/532 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ L+ L ++ +G + + WS
Sbjct: 197 LAEYKQALRRIKFEELFYFQM-----QLQTLKSENRVQG-----------SGLVLNWSQE 240
Query: 501 TKKLLRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
++A LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +
Sbjct: 241 KVTAVKASLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTA 300
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
GYQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+
Sbjct: 301 GYQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGE 353
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
L++GTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 354 ADLIVGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN- 398
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 --------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|336421516|ref|ZP_08601673.1| ATP-dependent DNA helicase RecG [Lachnospiraceae bacterium
5_1_57FAA]
gi|336000400|gb|EGN30550.1| ATP-dependent DNA helicase RecG [Lachnospiraceae bacterium
5_1_57FAA]
Length = 676
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 131/350 (37%), Positives = 189/350 (54%), Gaps = 46/350 (13%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
P+Y GL+ +++ + +AL L + +P E+ ++GL GIH P+ +
Sbjct: 146 PVYGLTAGLSNNVVAKAMHQALSQLDLTRETLPDELRLKYGLAEYNYVIRGIHFPEDKEV 205
Query: 444 ADLARKRLIFDEF--FYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
AR+RL+F+EF F L + ++ E + E E ++ RKP ++
Sbjct: 206 FYHARERLVFEEFLEFILSIRKMKDKNE----RIENEYIVQ--RKPEVD----------- 248
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
+L+ LPY LT +Q EI D+ M+RL+QGDVG GKT+VA LA + V +GY
Sbjct: 249 -ELIGRLPYELTKAQKKVWDEIAHDMASDTAMSRLVQGDVGSGKTIVAVLALISVALNGY 307
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q A M PTE+LA QHY+ + +LL EE K K+ LLTGS K+ R ++ G
Sbjct: 308 QGAMMAPTEVLARQHYDSITRLL---EEYGIKIKVELLTGSMTAKEKRRAYDRIECGYAR 364
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
++IGTH+LI ++V + L L + DEQ RFGV QR F K GM
Sbjct: 365 IIIGTHALIQDRVYYDCLALVVTDEQHRFGVKQREAFARK-------GGM---------- 407
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
PHVL MSATPIPRTLA+ LYGD+ ++ I +LP R+PIK +++
Sbjct: 408 ------PHVLVMSATPIPRTLAIILYGDLDISVIDELPANRLPIKNCVVD 451
>gi|256015357|ref|YP_003105366.1| ATP-dependent DNA helicase RecG [Brucella microti CCM 4915]
gi|255998017|gb|ACU49704.1| ATP-dependent DNA helicase RecG [Brucella microti CCM 4915]
Length = 706
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 145/396 (36%), Positives = 197/396 (49%), Gaps = 57/396 (14%)
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRD 399
GE V VSGKV +Y I + D L L P+YP GL+ L
Sbjct: 126 GETVIVSGKVEWFNGRASMVHPDY-IASMDDAASLPLVE-----PVYPLTAGLSPKTLGR 179
Query: 400 TIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA-----RKRLIFD 454
I AL +P + + + G A +HQP+ D D+A R+RL +D
Sbjct: 180 AIKEALTRVPVLPEWIDAPLLAREGFPAFQQALNTLHQPE--DPGDIALESITRRRLAYD 237
Query: 455 EFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTS 514
EF QL L + + RL+ +EG ++ +++R LPY LT
Sbjct: 238 EFLAGQLALA----------------LVRAKTRRLSGRPLEGTGNIVAEIMRHLPYRLTK 281
Query: 515 SQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLAT 574
+Q A+ EII DLK P M RLLQGDVG GKTVV L+ SG Q+A M PTE+LA
Sbjct: 282 AQEQAVREIITDLKSPQRMLRLLQGDVGSGKTVVGLLSMAHAAESGGQSALMAPTEVLAR 341
Query: 575 QHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKV 634
QH+ + L +K K ALLTG ++ + + L++G+I +VIGTH+L EKV
Sbjct: 342 QHFATIAPL-----AEKAGLKAALLTGREKGRERNAVLEGLKSGEIDIVIGTHALFQEKV 396
Query: 635 EFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMS 694
E+ L I+DEQ RFGV QR M+ + GS AP +L M+
Sbjct: 397 EYHDLVFVIIDEQHRFGVHQR----------------LMLTAKGS-------APDMLVMT 433
Query: 695 ATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
ATPIPRTL L +GDM ++++T+ P GR PI T I+
Sbjct: 434 ATPIPRTLVLTAFGDMDVSKLTEKPVGRQPITTAIV 469
>gi|380693683|ref|ZP_09858542.1| ATP-dependent DNA helicase RecG [Bacteroides faecis MAJ27]
Length = 698
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 151/437 (34%), Positives = 224/437 (51%), Gaps = 65/437 (14%)
Query: 303 IDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIE---GKHKVGEFVCVSGKVRAMRSNNHYE 359
I G+++++ H F GT + + + I+ GK+K+ E + GK N
Sbjct: 74 IGEGRQRRLTAH---FSDGTGVVDLVWFQGIKYILGKYKLHEEYIIFGKPTVF--NGRIN 128
Query: 360 MREYNIDVLKDEDDLSLRAKG-RPYPIYPSK---GGLNASLLRDTIARALQALPANFDPV 415
+ +ID DDL L + G +PY K LN+ + +A +Q + +P+
Sbjct: 129 VAHPDID---KPDDLKLSSVGLQPYYNTTEKMKRSFLNSHAIEKMMATVIQQIQ---EPL 182
Query: 416 PK----EITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGL 471
P+ +I + L+ L +A IH P + D A+ RL F+E FY+QL L
Sbjct: 183 PETLSPKILSDHHLMPLTEALRNIHFPTNPDLLRRAQYRLKFEELFYVQLNIL------- 235
Query: 472 GTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLL-RALPYSLTSSQLSAISEIIWDLKQP 530
++ K+ R+ R E + + LP+ LT +Q + EI D+
Sbjct: 236 --RYAKD------RQRRYRGYIFERVGDIFNTFYSQNLPFQLTGAQKRVLKEIRNDVGSG 287
Query: 531 VPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEED 590
MNRLLQGDVG GKT+VA ++ + + +G+QA M PTE+LA QHYE + +LL M+
Sbjct: 288 RQMNRLLQGDVGSGKTLVALMSMLLALDNGFQACMMAPTEILANQHYETIRELLFGMD-- 345
Query: 591 KHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRF 650
++ LLTGS K+ I L TGD+ ++IGTH++I + V FS+L L ++DEQ RF
Sbjct: 346 ---IRVELLTGSVKGKKREAILSGLLTGDVKILIGTHAVIEDTVNFSSLGLVVIDEQHRF 402
Query: 651 GVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDM 710
GV QR R +K + P PHVL M+ATPIPRTLA+ LYGD+
Sbjct: 403 GVAQRARLWTK---------------NVQP-------PHVLVMTATPIPRTLAMTLYGDL 440
Query: 711 SLTQITDLPPGRIPIKT 727
++ I +LPPGR PI T
Sbjct: 441 DVSVIDELPPGRKPITT 457
>gi|283797869|ref|ZP_06347022.1| ATP-dependent DNA helicase RecG [Clostridium sp. M62/1]
gi|291074560|gb|EFE11924.1| ATP-dependent DNA helicase RecG [Clostridium sp. M62/1]
gi|295091919|emb|CBK78026.1| ATP-dependent DNA helicase RecG [Clostridium cf. saccharolyticum
K10]
Length = 722
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 162/523 (30%), Positives = 241/523 (46%), Gaps = 83/523 (15%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
++ + G+ ++ + +LLH++PR Y + Q + ++
Sbjct: 44 LTAIKGVGEKTARLFSKLNVTNVEELLHYYPRAYDAFREPQP----------VKSLVP-- 91
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFL 330
E E T+T +VV Q ++L + + ++PFL
Sbjct: 92 -----------ETTAAVEGVLTKTA---DVVRFSHLQVTMVHLRDETGTVQLNWYNMPFL 137
Query: 331 KSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKG 390
+S K GE GKV R E E S++ P+Y
Sbjct: 138 RST---LKAGERFVFRGKVAKKRGKLVMEQPEIYRPAQYSALVHSMQ------PVYGQTK 188
Query: 391 GLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL--AR 448
GL + +A+AL D +P+ + +++ L A IH PK DEA+L +R
Sbjct: 189 GLGNKTIAKAVAQALSERELERDYMPERLREKYELAEYNFALEHIHFPK--DEAELLFSR 246
Query: 449 KRLIFDEFFYLQLG-RLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRA 507
KRL+FDEFF L RL K +K + Y+ ++L +
Sbjct: 247 KRLVFDEFFMFLLSVRLL-----------------KEKKADTKSLYVMEPRPEVQRLKDS 289
Query: 508 LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMV 567
LPYSLT +Q + E+ DL MNRL+QGDVG GKT++A LA ++ +GYQ A MV
Sbjct: 290 LPYSLTKAQEKVLKEVYADLSGGQVMNRLVQGDVGSGKTIIAILALLQAAYNGYQGALMV 349
Query: 568 PTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTH 627
PTE+LA QH E + +L +K K LLTGS K+ RM + +++ + +++GTH
Sbjct: 350 PTEVLARQHLESMEELFAAHGIEK---KAILLTGSMTAKEKRMAYQKIESHEADIIVGTH 406
Query: 628 SLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMA 687
+LI EKV + L L I DEQ RFGV QR M+ + G+
Sbjct: 407 ALIQEKVIYDKLALVITDEQHRFGVAQR----------------EMLGNKGT-------E 443
Query: 688 PHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
PHVL MSATPIPRTLA+ +YGD+ ++ I +LP R PIK ++
Sbjct: 444 PHVLVMSATPIPRTLAIIIYGDLDISIIDELPANRKPIKNCVV 486
>gi|51849608|dbj|BAD42331.1| DNA helicase RecG [Nannochloris bacillaris]
Length = 1341
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/376 (36%), Positives = 193/376 (51%), Gaps = 76/376 (20%)
Query: 386 YPSKGG-LNASLLRDTIARALQALPANF----DPVPKEITQEFGLLCLFDAYMGIHQPKH 440
YP KG L + L + +ALQ L A DPVP+ I ++G + +A G+H+P
Sbjct: 731 YPQKGKVLTSDKLAEAAEKALQMLEAGSNQWEDPVPEHIRHKYGFMGYLEALRGMHRPTG 790
Query: 441 IDEADLARKRLIFDEFFY-----------LQLGRLYQMLEGLG-TQFEKEGLLDKYRKPR 488
+ + R+RL F E L+L ++G+ T F + +D R
Sbjct: 791 PEHYEACRRRLAFQELLVLQLKLLLQRATLRLPSNKNGIQGVAVTNFAQ---MDLVR--- 844
Query: 489 LNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVV 548
RALP+ LT +Q A+S + + PM LLQGDVGCGKT V
Sbjct: 845 -----------------RALPFELTGAQDRALSAVTDGMTGWPPMMALLQGDVGCGKTAV 887
Query: 549 AFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNME--------------EDKHKP 594
AFL+ + GSGYQAA M PTE+LA QH+ L +L++ + P
Sbjct: 888 AFLSVLAATGSGYQAAVMAPTEILAEQHFSVLKRLIEEAKAVAEADPDDRDAAAAAASLP 947
Query: 595 KIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQ 654
++ LLTGST + I+ L+ G I +++GTH+LI++ V FS L LAI+DEQ +FGV Q
Sbjct: 948 EVVLLTGSTKRAERNRIQAGLEDGSIGVIVGTHALISDNVAFSNLGLAIIDEQHKFGVGQ 1007
Query: 655 RGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQ 714
R +K SP +PH+L+MSATPIPR+LAL +G++SL
Sbjct: 1008 RAALLAK----------------ASP------SPHILSMSATPIPRSLALVAHGELSLVT 1045
Query: 715 ITDLPPGRIPIKTYII 730
I +LPPGRIP+ T ++
Sbjct: 1046 IDELPPGRIPVATQVV 1061
>gi|149001989|ref|ZP_01826943.1| N-acetylmannosamine-6-phosphate 2-epimerase [Streptococcus
pneumoniae SP14-BS69]
gi|418144644|ref|ZP_12781439.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA13494]
gi|419458284|ref|ZP_13998226.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA02254]
gi|147759798|gb|EDK66788.1| N-acetylmannosamine-6-phosphate 2-epimerase [Streptococcus
pneumoniae SP14-BS69]
gi|353807110|gb|EHD87382.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA13494]
gi|379529948|gb|EHY95189.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA02254]
Length = 671
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 162/531 (30%), Positives = 255/531 (48%), Gaps = 97/531 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + + + + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLSQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ QML+ + + GL+ + + ++ A +
Sbjct: 197 LAEYKQALRRIKFEELFYFQMQ--LQMLKS-ENRVQGSGLVLNWSQEKVTAVKV------ 247
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
+LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +G
Sbjct: 248 ------SLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTAG 301
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+
Sbjct: 302 YQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGEA 354
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 355 DLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN-- 398
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 -------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|319948348|ref|ZP_08022492.1| ATP-dependent DNA helicase RecG [Dietzia cinnamea P4]
gi|319437979|gb|EFV92955.1| ATP-dependent DNA helicase RecG [Dietzia cinnamea P4]
Length = 756
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 178/548 (32%), Positives = 254/548 (46%), Gaps = 88/548 (16%)
Query: 215 PGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI----DLDDGQYFIFIGEIISSR 270
PGL++R+ G T+ LLH PR Y Q+ Q L DG+ IG + ++R
Sbjct: 17 PGLAERITTAF---GHRTVGDLLHTLPRRYR--QHGQRYDKRQLVDGERVTVIGTVTTAR 71
Query: 271 G----MKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKF--FRGT-- 322
K G L + V E DTE V +G+ K L + F GT
Sbjct: 72 TRTYHTKKGQPREMLTLTV--EDGDTEFR-----VVFFAGRSIKYLLPVGTLAMFDGTVS 124
Query: 323 RFTSIPFLKSIEGKHKVGEFVCV---SGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAK 379
F P LK E F+ + SG+ ++ + + E SL
Sbjct: 125 HFRRAPDLKHPE-------FLVLRPASGQGGQLKGSGDLAALARLAAEIDAEGGPSL--F 175
Query: 380 GRPY-PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQP 438
RP P+Y +K G+ + L + AL+AL DP+ + GL+ L +A H P
Sbjct: 176 DRPLLPVYAAKEGVTSWDLLGAVVTALRALVPVVDPLDDTVRSAAGLMGLDEALRKAHLP 235
Query: 439 KHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWS 498
++ E D A RL FDE LQL + R A S
Sbjct: 236 ENAREKDHAGHRLRFDEALALQL--------------------LLGARRRFVARDPAPAS 275
Query: 499 SLTKKLLRA-----LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLAC 553
+ +RA +P+ LT Q + + EI DL + PMNRLLQG+VG GKTVVA LA
Sbjct: 276 PVRDDGIRAAMGARMPFELTDGQKAVLEEISADLARDEPMNRLLQGEVGSGKTVVALLAM 335
Query: 554 MEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEED------KHKPKIALLTGSTPVKQ 607
++V+ +G Q + PTE+LA QH+ L +L ++ E ++ LLTGS Q
Sbjct: 336 LQVLDAGRQCVMLAPTEVLAVQHHRSLTAMLGDLGERGRLGAPDEATRVVLLTGSMSTAQ 395
Query: 608 SRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSM 667
R D+ TG+ +V+GTH+LI + V+F L L +VDEQ RFGV QR R SK
Sbjct: 396 RRAALLDIVTGEAGIVVGTHALIQDSVDFFDLGLVVVDEQHRFGVRQRDRLRSK------ 449
Query: 668 SSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
G A M PH+L M+ATPIPRT+A+ ++GD+ ++++ +LP GR PI T
Sbjct: 450 --GRA------------GMVPHLLVMTATPIPRTIAMTVFGDLEVSELEELPGGRRPIST 495
Query: 728 YIIEGNEK 735
++ E+
Sbjct: 496 SVVPARER 503
>gi|268319221|ref|YP_003292877.1| ATP-dependent DNA helicase RecG [Lactobacillus johnsonii FI9785]
gi|262397596|emb|CAX66610.1| ATP-dependent DNA helicase RecG [Lactobacillus johnsonii FI9785]
Length = 679
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 168/524 (32%), Positives = 251/524 (47%), Gaps = 101/524 (19%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQID-LDDGQYFIFIGEIIS- 268
++ + G+ + L + G T+ LL +FP Y DL+ +D ++DGQ + G +++
Sbjct: 12 VTELKGVGAKTATALASLGINTIYDLLFYFPFRYDDLETIPLDQIEDGQKVLLKGMVVTD 71
Query: 269 ---SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFT 325
SR SF ++ + +I +VN F
Sbjct: 72 PFVSRFGYRKTRLSF-KMKIDHDII---------MVN---------------------FF 100
Query: 326 SIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPI 385
+ P+LK K + G+ V V GK + +R + + + K + + PI
Sbjct: 101 NQPWLKD---KVESGKEVAVYGKYQVVRQ----ALSGFKLVAEKKDSGFA--------PI 145
Query: 386 YPSKGGLNASLLRDTIARALQ-ALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
Y L + L+ I AL+ A+ + +P I +++ LL +H PK+ +EA
Sbjct: 146 YSVNRHLKQNKLQKLIDLALEEAINEVGETIPVSIREKYCLLSDRVLVEKMHHPKNGNEA 205
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
+AR+ IF EFF Q+ +L Q+L + G+ KY + K+L
Sbjct: 206 KIARRSAIFREFFLFQM-QLAQLLSQRNE--DAPGVEKKYD------------LAAVKEL 250
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
+ +P+ L+ Q ++EI DL M RLLQGDVG GKTVVA A + +GYQAA
Sbjct: 251 IEEIPFELSDDQKKVVNEIFADLHSKRQMRRLLQGDVGSGKTVVAVFAIYAAVTAGYQAA 310
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKP---KIALLTGSTPVKQSRMIRKDLQTGDIT 621
MVPTE+LA QH+ + +LL KP ++ALLTG T + + I +L G I
Sbjct: 311 LMVPTEILAQQHFAKIDELL--------KPLGVRVALLTGDTKDLEKKEIYHELADGTIN 362
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+VIGTH+LI + V F L L I+DEQ RFGV QR T + G
Sbjct: 363 VVIGTHALIQKDVHFKDLGLVIIDEQHRFGVNQRN--------TLIKKG----------- 403
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
AP +LAM+ATPIPRTLAL +YGDM++++I LP GR P+
Sbjct: 404 ----DAPDILAMTATPIPRTLALTVYGDMAVSEIRHLPKGRKPV 443
>gi|85818779|gb|EAQ39938.1| DEAD/DEAH box helicase [Dokdonia donghaensis MED134]
Length = 700
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 160/514 (31%), Positives = 249/514 (48%), Gaps = 97/514 (18%)
Query: 228 CGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRG-MKAGCSFSFLEVIVG 286
G +T + L+H FP Y +D +Y+ I E+ S ++ F+ +++I G
Sbjct: 28 LGIHTFQDLMHLFPHRY---------IDKTRYYK-ISELERSNAEVQIIGKFTSMKMIEG 77
Query: 287 CEIADTETTSGDEVVNI---DSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFV 343
G +V D GQ + ++ K+ + + P++ + + G+F
Sbjct: 78 ---------KGRRLVATFRDDGGQMELVWFRGHKWIKEGIKMNTPYVIFGKCNYYNGKF- 127
Query: 344 CVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGL-NASLLRDTIA 402
S H EM L E + S+R+ +P +YPS L N + +
Sbjct: 128 ----------SMPHPEME------LLSEHEKSIRSAMQP--VYPSTEKLSNRGITNKVVN 169
Query: 403 RALQALPAN-----FDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFF 457
+Q L F+ + K + E L+ +A + +H P+ + A+ RL F+EFF
Sbjct: 170 GVMQTLFMEAKNHLFESLSKPLVTELKLMPKREALLNVHFPQSQEHLARAQYRLKFEEFF 229
Query: 458 YLQLGRLYQMLEGL----GTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLT 513
Y+QL ++ + G FEK G P Y + LP+ LT
Sbjct: 230 YIQLQLAFKNVNHKTKIKGYPFEKVG-------PIFTEFYND-----------HLPFELT 271
Query: 514 SSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLA 573
+Q + EI DL MNRLLQGDVG GKT+VA ++ + + +G+QA M PT +LA
Sbjct: 272 GAQKRVLKEIRHDLGTNAQMNRLLQGDVGSGKTIVALMSMLMALDNGFQACLMAPTAILA 331
Query: 574 TQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEK 633
QHY+ LL+L + I+LL GST + ++I + L+ G++ ++IGTH+L+ +K
Sbjct: 332 VQHYQGLLELCKEL-----NTSISLLQGSTKTLERKIIHEQLENGELDILIGTHALLEDK 386
Query: 634 VEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAM 693
V+F L LA++DEQ RFGV QR SKL++ + PHVL M
Sbjct: 387 VKFKNLGLAVIDEQHRFGVKQR----SKLWHKN------------------EYPPHVLVM 424
Query: 694 SATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ATPIPRTLA+ +YGD+ ++ I +LPPGR IKT
Sbjct: 425 TATPIPRTLAMTVYGDLDVSVIDELPPGRKAIKT 458
>gi|23500325|ref|NP_699765.1| ATP-dependent DNA helicase RecG [Brucella suis 1330]
gi|62317562|ref|YP_223415.1| ATP-dependent DNA helicase RecG [Brucella abortus bv. 1 str. 9-941]
gi|83269543|ref|YP_418834.1| ATP-dependent DNA helicase RecG [Brucella melitensis biovar Abortus
2308]
gi|161620643|ref|YP_001594529.1| ATP-dependent DNA helicase RecG [Brucella canis ATCC 23365]
gi|189022816|ref|YP_001932557.1| ATP-dependent DNA helicase RecG [Brucella abortus S19]
gi|225686367|ref|YP_002734339.1| ATP-dependent DNA helicase RecG [Brucella melitensis ATCC 23457]
gi|256262492|ref|ZP_05465024.1| ATP-dependent DNA helicase RecG [Brucella melitensis bv. 2 str.
63/9]
gi|260544799|ref|ZP_05820620.1| ATP-dependent DNA helicase RecG [Brucella abortus NCTC 8038]
gi|260564672|ref|ZP_05835157.1| ATP-dependent DNA helicase RecG [Brucella melitensis bv. 1 str.
16M]
gi|260568132|ref|ZP_05838601.1| ATP-dependent DNA helicase RecG [Brucella suis bv. 4 str. 40]
gi|260756656|ref|ZP_05869004.1| ATP-dependent DNA helicase RecG [Brucella abortus bv. 6 str. 870]
gi|260760087|ref|ZP_05872435.1| ATP-dependent DNA helicase RecG [Brucella abortus bv. 4 str. 292]
gi|260882473|ref|ZP_05894087.1| ATP-dependent DNA helicase RecG [Brucella abortus bv. 9 str. C68]
gi|261216033|ref|ZP_05930314.1| ATP-dependent DNA helicase RecG [Brucella abortus bv. 3 str. Tulya]
gi|261323176|ref|ZP_05962373.1| ATP-dependent DNA helicase RecG [Brucella neotomae 5K33]
gi|261753563|ref|ZP_05997272.1| ATP-dependent DNA helicase RecG [Brucella suis bv. 3 str. 686]
gi|265989894|ref|ZP_06102451.1| ATP-dependent DNA helicase RecG [Brucella melitensis bv. 1 str.
Rev.1]
gi|265993000|ref|ZP_06105557.1| ATP-dependent DNA helicase RecG [Brucella melitensis bv. 3 str.
Ether]
gi|297249602|ref|ZP_06933303.1| ATP-dependent DNA helicase RecG [Brucella abortus bv. 5 str. B3196]
gi|376271202|ref|YP_005114247.1| ATP-dependent DNA helicase RecG [Brucella abortus A13334]
gi|376276720|ref|YP_005152781.1| ATP-dependent DNA helicase RecG [Brucella canis HSK A52141]
gi|376278547|ref|YP_005108580.1| ATP-dependent DNA helicase RecG [Brucella suis VBI22]
gi|384213091|ref|YP_005602174.1| ATP-dependent DNA helicase RecG [Brucella melitensis M5-90]
gi|384223108|ref|YP_005614273.1| ATP-dependent DNA helicase RecG [Brucella suis 1330]
gi|384410191|ref|YP_005598811.1| ATP-dependent DNA helicase RecG [Brucella melitensis M28]
gi|384446718|ref|YP_005660936.1| ATP-dependent DNA helicase RecG [Brucella melitensis NI]
gi|423168544|ref|ZP_17155246.1| ATP-dependent DNA helicase RecG [Brucella abortus bv. 1 str.
NI435a]
gi|423172023|ref|ZP_17158697.1| ATP-dependent DNA helicase RecG [Brucella abortus bv. 1 str. NI474]
gi|423174246|ref|ZP_17160916.1| ATP-dependent DNA helicase RecG [Brucella abortus bv. 1 str. NI486]
gi|423176123|ref|ZP_17162789.1| ATP-dependent DNA helicase RecG [Brucella abortus bv. 1 str. NI488]
gi|423181452|ref|ZP_17168092.1| ATP-dependent DNA helicase RecG [Brucella abortus bv. 1 str. NI010]
gi|423184585|ref|ZP_17171221.1| ATP-dependent DNA helicase RecG [Brucella abortus bv. 1 str. NI016]
gi|423187735|ref|ZP_17174348.1| ATP-dependent DNA helicase RecG [Brucella abortus bv. 1 str. NI021]
gi|423190156|ref|ZP_17176765.1| ATP-dependent DNA helicase RecG [Brucella abortus bv. 1 str. NI259]
gi|23463938|gb|AAN33770.1| ATP-dependent DNA helicase RecG [Brucella suis 1330]
gi|62197755|gb|AAX76054.1| RecG, ATP-dependent DNA helicase [Brucella abortus bv. 1 str.
9-941]
gi|82939817|emb|CAJ12825.1| DEAD/DEAH box helicase:RecA bacterial DNA recombination
protein:Helicase, C-terminal:ATP/GTP-binding site motif
A (P-loop):Ha [Brucella melitensis biovar Abortus 2308]
gi|161337454|gb|ABX63758.1| ATP-dependent DNA helicase RecG [Brucella canis ATCC 23365]
gi|189021390|gb|ACD74111.1| ATP-dependent DNA helicase RecG [Brucella abortus S19]
gi|225642472|gb|ACO02385.1| ATP-dependent DNA helicase RecG [Brucella melitensis ATCC 23457]
gi|260098070|gb|EEW81944.1| ATP-dependent DNA helicase RecG [Brucella abortus NCTC 8038]
gi|260152315|gb|EEW87408.1| ATP-dependent DNA helicase RecG [Brucella melitensis bv. 1 str.
16M]
gi|260154797|gb|EEW89878.1| ATP-dependent DNA helicase RecG [Brucella suis bv. 4 str. 40]
gi|260670405|gb|EEX57345.1| ATP-dependent DNA helicase RecG [Brucella abortus bv. 4 str. 292]
gi|260676764|gb|EEX63585.1| ATP-dependent DNA helicase RecG [Brucella abortus bv. 6 str. 870]
gi|260872001|gb|EEX79070.1| ATP-dependent DNA helicase RecG [Brucella abortus bv. 9 str. C68]
gi|260917640|gb|EEX84501.1| ATP-dependent DNA helicase RecG [Brucella abortus bv. 3 str. Tulya]
gi|261299156|gb|EEY02653.1| ATP-dependent DNA helicase RecG [Brucella neotomae 5K33]
gi|261743316|gb|EEY31242.1| ATP-dependent DNA helicase RecG [Brucella suis bv. 3 str. 686]
gi|262763870|gb|EEZ09902.1| ATP-dependent DNA helicase RecG [Brucella melitensis bv. 3 str.
Ether]
gi|263000563|gb|EEZ13253.1| ATP-dependent DNA helicase RecG [Brucella melitensis bv. 1 str.
Rev.1]
gi|263092229|gb|EEZ16526.1| ATP-dependent DNA helicase RecG [Brucella melitensis bv. 2 str.
63/9]
gi|297173471|gb|EFH32835.1| ATP-dependent DNA helicase RecG [Brucella abortus bv. 5 str. B3196]
gi|326410738|gb|ADZ67802.1| ATP-dependent DNA helicase RecG [Brucella melitensis M28]
gi|326554031|gb|ADZ88670.1| ATP-dependent DNA helicase RecG [Brucella melitensis M5-90]
gi|343384556|gb|AEM20047.1| ATP-dependent DNA helicase RecG [Brucella suis 1330]
gi|349744715|gb|AEQ10257.1| ATP-dependent DNA helicase RecG [Brucella melitensis NI]
gi|358259985|gb|AEU07718.1| ATP-dependent DNA helicase RecG [Brucella suis VBI22]
gi|363402374|gb|AEW19343.1| ATP-dependent DNA helicase RecG [Brucella abortus A13334]
gi|363405094|gb|AEW15388.1| ATP-dependent DNA helicase RecG [Brucella canis HSK A52141]
gi|374536445|gb|EHR07965.1| ATP-dependent DNA helicase RecG [Brucella abortus bv. 1 str. NI474]
gi|374537750|gb|EHR09260.1| ATP-dependent DNA helicase RecG [Brucella abortus bv. 1 str.
NI435a]
gi|374540247|gb|EHR11749.1| ATP-dependent DNA helicase RecG [Brucella abortus bv. 1 str. NI486]
gi|374546042|gb|EHR17502.1| ATP-dependent DNA helicase RecG [Brucella abortus bv. 1 str. NI010]
gi|374546885|gb|EHR18344.1| ATP-dependent DNA helicase RecG [Brucella abortus bv. 1 str. NI016]
gi|374554725|gb|EHR26135.1| ATP-dependent DNA helicase RecG [Brucella abortus bv. 1 str. NI488]
gi|374555539|gb|EHR26948.1| ATP-dependent DNA helicase RecG [Brucella abortus bv. 1 str. NI021]
gi|374556196|gb|EHR27601.1| ATP-dependent DNA helicase RecG [Brucella abortus bv. 1 str. NI259]
Length = 706
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 145/396 (36%), Positives = 197/396 (49%), Gaps = 57/396 (14%)
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRD 399
GE V VSGKV +Y I + D L L P+YP GL+ L
Sbjct: 126 GETVIVSGKVEWFNGRASMVHPDY-IASMDDAASLPLVE-----PVYPLTAGLSPKTLGR 179
Query: 400 TIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA-----RKRLIFD 454
I AL +P + + + G A +HQP+ D D+A R+RL +D
Sbjct: 180 AIKEALTRVPVLPEWIDAPLLAREGFPAFQQALNTLHQPE--DPGDIALESITRRRLAYD 237
Query: 455 EFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTS 514
EF QL L + + RL+ +EG ++ +++R LPY LT
Sbjct: 238 EFLAGQLALA----------------LVRAKTRRLSGRPLEGTGNIVAEIMRHLPYRLTK 281
Query: 515 SQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLAT 574
+Q A+ EII DLK P M RLLQGDVG GKTVV L+ SG Q+A M PTE+LA
Sbjct: 282 AQEQAVREIITDLKSPQRMLRLLQGDVGSGKTVVGLLSMAHAAESGGQSALMAPTEVLAR 341
Query: 575 QHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKV 634
QH+ + L +K K ALLTG ++ + + L++G+I +VIGTH+L EKV
Sbjct: 342 QHFATIAPL-----AEKAGLKAALLTGREKGRERNAVLEGLKSGEIDIVIGTHALFQEKV 396
Query: 635 EFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMS 694
E+ L I+DEQ RFGV QR M+ + GS AP +L M+
Sbjct: 397 EYHDLVFVIIDEQHRFGVHQR----------------LMLTAKGS-------APDMLVMT 433
Query: 695 ATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
ATPIPRTL L +GDM ++++T+ P GR PI T I+
Sbjct: 434 ATPIPRTLVLTAFGDMDVSKLTEKPVGRQPITTAIV 469
>gi|405760437|ref|YP_006701033.1| ATP-dependent DNA helicase [Streptococcus pneumoniae SPNA45]
gi|404277326|emb|CCM07836.1| ATP-dependent DNA helicase [Streptococcus pneumoniae SPNA45]
Length = 671
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 163/532 (30%), Positives = 254/532 (47%), Gaps = 99/532 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ L+ L ++ +G + + WS
Sbjct: 197 LAEYKQALRRIKFEELFYFQM-----QLQTLKSENRIQG-----------SGLVLDWSQE 240
Query: 501 TKKLLRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
++A LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +
Sbjct: 241 KVTAVKASLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTA 300
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
GYQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+
Sbjct: 301 GYQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGE 353
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 354 ADLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN- 398
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 --------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|306845912|ref|ZP_07478480.1| ATP-dependent DNA helicase RecG [Brucella inopinata BO1]
gi|306273804|gb|EFM55642.1| ATP-dependent DNA helicase RecG [Brucella inopinata BO1]
Length = 706
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 145/396 (36%), Positives = 197/396 (49%), Gaps = 57/396 (14%)
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRD 399
GE V VSGKV +Y I + D L L P+YP GL+ L
Sbjct: 126 GETVIVSGKVEWFNGRASMVHPDY-IASMDDAASLPLVE-----PVYPLTAGLSPKTLGR 179
Query: 400 TIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA-----RKRLIFD 454
I AL +P + + + G A +HQP+ D D+A R+RL +D
Sbjct: 180 AIKEALTRVPVLPEWIDAPLLAREGFPAFQQALNTLHQPE--DPGDIALESITRRRLAYD 237
Query: 455 EFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTS 514
EF QL L + + RL+ +EG ++ +++R LPY LT
Sbjct: 238 EFLAGQLALA----------------LVRAKTRRLSGRPLEGTGNIVAEIMRHLPYRLTK 281
Query: 515 SQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLAT 574
+Q A+ EII DLK P M RLLQGDVG GKTVV L+ SG Q+A M PTE+LA
Sbjct: 282 AQEQAVREIITDLKSPQRMLRLLQGDVGSGKTVVGLLSMAHAAESGGQSALMAPTEVLAR 341
Query: 575 QHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKV 634
QH+ + L +K K ALLTG ++ + + L++G+I +VIGTH+L EKV
Sbjct: 342 QHFATIAPL-----AEKAGLKAALLTGREKGRERNAVLEGLKSGEIDIVIGTHALFQEKV 396
Query: 635 EFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMS 694
E+ L I+DEQ RFGV QR M+ + GS AP +L M+
Sbjct: 397 EYHDLVFVIIDEQHRFGVHQR----------------LMLTAKGS-------APDMLVMT 433
Query: 695 ATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
ATPIPRTL L +GDM ++++T+ P GR PI T I+
Sbjct: 434 ATPIPRTLVLTAFGDMDVSKLTEKPVGRQPITTAIV 469
>gi|433546901|ref|ZP_20503197.1| ATP-dependent DNA helicase RecG [Brevibacillus agri BAB-2500]
gi|432181796|gb|ELK39401.1| ATP-dependent DNA helicase RecG [Brevibacillus agri BAB-2500]
Length = 684
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 163/527 (30%), Positives = 255/527 (48%), Gaps = 98/527 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIISS 269
+S + G+ + G +++ LL +FP Y D + + ++ DG+ G
Sbjct: 9 VSLLHGVGEERAKAFAGLGIHSIGDLLEYFPSRYEDYRVRDLTEVKDGERVTLAG----- 63
Query: 270 RGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPF 329
T G+ V K+K L +K T++ F
Sbjct: 64 ------------------------TVYGEPSVRFYG--KRKSRLSVKMVMDRVVVTAVWF 97
Query: 330 LKS-IEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRA--KGRPYPIY 386
++ ++ + G+ + V+GK ++ + I V + + S RA +G P+Y
Sbjct: 98 NQTFVKSRLSPGKEILVTGK---------WDKHKLQITVSEMTEVDSERATKRGELAPVY 148
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
P G + +LLR +I +AL+ + + P +I + + L+ A+ IH P++ ++
Sbjct: 149 PLGGDMTHTLLRKSIQQALRQYGKDIPEILPPDIVERYRLMPRVAAFHSIHFPENAEDGR 208
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGL-----LDKYRKPRLNAAYMEGWSSL 500
AR+R++F+E F QL Q L + Q + EG+ +D+ R+
Sbjct: 209 QARRRIMFEELFLFQLK--IQTLRRINRQ-QSEGVALAIPMDEVRQ-------------- 251
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
++ LP+ LT +Q + EI+ D++ P MNRLLQGDVG GKTVVA +A + + +G
Sbjct: 252 ---FVKGLPFPLTDAQKRVVKEILDDMRAPHAMNRLLQGDVGSGKTVVAAIALLAAVKAG 308
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQ A MVPTE+LA QH + L KLL + + ++ALL+GS K+ R + LQ G I
Sbjct: 309 YQGALMVPTEILAEQHVQSLTKLLAD-----YGIEVALLSGSLTAKRRREVIGSLQMGLI 363
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+V+GTH+LI E V FS L L I DEQ RFGV QR +K
Sbjct: 364 DVVVGTHALIQEDVFFSRLGLVITDEQHRFGVEQRRILRNK------------------- 404
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI+T
Sbjct: 405 ----GLTPDVLFMTATPIPRTLAITAFGDMDVSTIDQMPAGRKPIET 447
>gi|319892225|ref|YP_004149100.1| ATP-dependent DNA helicase RecG [Staphylococcus pseudintermedius
HKU10-03]
gi|386319507|ref|YP_006015670.1| ATP-dependent DNA helicase RecG [Staphylococcus pseudintermedius
ED99]
gi|317161921|gb|ADV05464.1| ATP-dependent DNA helicase RecG [Staphylococcus pseudintermedius
HKU10-03]
gi|323464678|gb|ADX76831.1| ATP-dependent DNA helicase RecG [Staphylococcus pseudintermedius
ED99]
Length = 681
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 141/411 (34%), Positives = 209/411 (50%), Gaps = 57/411 (13%)
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY 383
F + P+LK+ K ++ E V + GK + R+ I+ K DLS A +
Sbjct: 100 FFNQPYLKN---KIQLHETVVIKGK---------WSRRKQEINGQKMFFDLSQLADAQFT 147
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
P+Y K GL LRD I + LQ + + + +P + +++ L L D +H+ K
Sbjct: 148 PVYRVKEGLKQKTLRDMIQQTLQDITIH-EWLPASMREQYKLETLHDTIHALHEAKDQQS 206
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
AR+ F EFF +L + L++ K A ++ K
Sbjct: 207 LLRARRTFAFTEFFMFEL---------------RMQWLNRMEKMSEEAIEVQYDIQQVKT 251
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
+ LP+ LT Q +++EI DLK P+ M+RLLQGDVG GKTVVA + + +GYQ+
Sbjct: 252 FIETLPFELTEGQKQSVNEIFRDLKAPIRMHRLLQGDVGSGKTVVAAICMYAMKTAGYQS 311
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A MVPTE+LA QH E L++L +ALLTGS K+ +++ + L G+I +
Sbjct: 312 ALMVPTEILAEQHAESLVELFGPY------MNVALLTGSVKGKKRQLLLERLANGEIDCL 365
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
IGTH+LI + V F + L I DEQ RFGV QR + K A+ N
Sbjct: 366 IGTHALIQDDVAFHNVGLVITDEQHRFGVQQRQKLREK---------GALSN-------- 408
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
VL M+ATPIPRTLA++++G+M ++ I LP GR PI+TY ++ +
Sbjct: 409 ------VLFMTATPIPRTLAISVFGEMDVSSIKSLPKGRKPIETYWVKHEQ 453
>gi|160901684|ref|YP_001567265.1| ATP-dependent DNA helicase RecG [Petrotoga mobilis SJ95]
gi|160359328|gb|ABX30942.1| ATP-dependent DNA helicase RecG [Petrotoga mobilis SJ95]
Length = 781
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 168/545 (30%), Positives = 249/545 (45%), Gaps = 86/545 (15%)
Query: 200 EASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDG 257
E + PL D I + + + L G ++L+ ++ PR Y D + + +
Sbjct: 96 EKKLAPLTD--IKYIKKVGTKRALILNKLGIFSLKDFFYYPPRDYEDRRKVVKIFNAKED 153
Query: 258 QYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK 317
+ + IG ++ S +K + V E SG +V + K YL
Sbjct: 154 EKVVIIGNVVKSEEVKINKGLTIYNFSV-------EDDSGVIIVTFFNQDYVKSYLK--- 203
Query: 318 FFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLR 377
RG + GK+ S +M+ + V++ ++D
Sbjct: 204 --RGVK-------------------SAFYGKIEY--SYGMKQMKSPDFQVIESDEDF--- 237
Query: 378 AKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQ 437
K P+YP G+ + +R A+Q + +P+E QEF LL L GIH
Sbjct: 238 -KSEILPVYPLTFGIFQTTMRRIAKEAIQQTYFLEEFLPEEFVQEFNLLDLKKRIKGIHF 296
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGW 497
P I + + L ++E +L +Y L+ + E
Sbjct: 297 PLSIYHKERSWYSLKYEEAILFELAMIYLKLKMKEMK---------------KGETKEIK 341
Query: 498 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
LTKK L L + LT +Q + EI DL P PMNRLLQGDVG GKTVV+ LA ++V
Sbjct: 342 GELTKKFLNTLNFELTQAQKRSYEEIRKDLISPYPMNRLLQGDVGSGKTVVSELAIIDVC 401
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
+GYQAA M PT +LA Q ++ L K L+ + KI LLTG T +I++ L+
Sbjct: 402 EAGYQAAVMNPTSVLAKQQFKKLSKDLEPL-----GLKIVLLTGDTKESDKILIKEKLKL 456
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
G+I +V+GTH++I + VEF L L ++DEQ RFGV QR + ++
Sbjct: 457 GEIDVVVGTHAIIQQDVEFKKLGLVVIDEQHRFGVNQR---------------LELI--- 498
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII-EGNEKG 736
K H P +L M+ATPIPRTLA+ YGD+ ++ I ++P GR PIKT +I E N K
Sbjct: 499 ---KKGNH--PDILVMTATPIPRTLAMTFYGDLDVSLIDEMPKGRRPIKTILIAESNRKS 553
Query: 737 -YENV 740
YE V
Sbjct: 554 LYEFV 558
>gi|404450308|ref|ZP_11015292.1| ATP-dependent DNA helicase RecG [Indibacter alkaliphilus LW1]
gi|403764044|gb|EJZ24960.1| ATP-dependent DNA helicase RecG [Indibacter alkaliphilus LW1]
Length = 697
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 139/354 (39%), Positives = 189/354 (53%), Gaps = 55/354 (15%)
Query: 384 PIYPSKGGLNASLLRDT-IARALQ-----ALPANFDPVPKEITQEFGLLCLFDAYMGIHQ 437
P+Y + L A L I++ ++ ALP + + EI Q F L+ DA IH
Sbjct: 149 PVYSTTEKLRARYLDSKGISKIMEGLVQAALPQIQETLTLEIIQRFNLIGKRDAIRQIHF 208
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQML----EGLGTQFEKEGLLDKYRKPRLNAAY 493
P+ + AR RL F+EFFY+QL L L + G + LL+K+ Y
Sbjct: 209 PESPELLKRARFRLKFEEFFYVQLRLLKLKLTRTEKSQGQILNQTDLLNKF--------Y 260
Query: 494 MEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLAC 553
E +P+ LT +Q + E D+K MNRL+QGDVG GKT+VAF+
Sbjct: 261 NE-----------YIPFELTEAQKRVVREAFADMKSGKQMNRLIQGDVGSGKTMVAFICI 309
Query: 554 MEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRK 613
+ I SG QA M PTE+LA QHYE L + D M KIALLTGST ++I +
Sbjct: 310 LIAISSGAQACLMAPTEILANQHYEGLKEYADLM-----GLKIALLTGSTKKSARKIIHE 364
Query: 614 DLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAM 673
L +GD+ ++IGTH+L+ + V+F L LAIVDEQ RFGV QR + K
Sbjct: 365 MLLSGDLHIIIGTHALLEDIVQFKNLGLAIVDEQHRFGVAQRAKLWGK------------ 412
Query: 674 VNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+++ PHVL M+ATPIPRTLA+ LYGD+ ++ I +LP GR PI+T
Sbjct: 413 ---------NENFYPHVLVMTATPIPRTLAMTLYGDLDISVIDELPAGRKPIQT 457
>gi|319898844|ref|YP_004158937.1| ATP-dependent DNA helicase [Bartonella clarridgeiae 73]
gi|319402808|emb|CBI76359.1| ATP-dependent DNA helicase [Bartonella clarridgeiae 73]
Length = 701
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/350 (38%), Positives = 185/350 (52%), Gaps = 47/350 (13%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
PIYPS GL+ +R + +AL+ +P + + + + +E A IH P + D+
Sbjct: 159 PIYPSTAGLSTKTIRRAMQKALECIPPLPEWIEESVKKEHNFSSFPVALRRIHAPINPDD 218
Query: 444 ADL---ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
L ARKRL +DEFF Q+ LG L + L+ +
Sbjct: 219 LSLESTARKRLAYDEFFASQIA--------LG--------LVRLETKSLSGISRPSTGAY 262
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
TKKLL LP+ LT+ Q+ AI +I DL P PM RLLQGDVG GKTVVA +A ++ +
Sbjct: 263 TKKLLEVLPFQLTNGQIKAIKDIESDLASPEPMLRLLQGDVGTGKTVVALMAIAQIAENA 322
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
Q+A MVPTE+LA QH+ + L+ +K K ALLTG K I + +G+
Sbjct: 323 GQSALMVPTEVLARQHFATITPLV-----EKIGLKTALLTGREKGKVRANILDAILSGET 377
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+++IGTH+LI E V ++ L LAI+DEQ RFGV QR +K G+
Sbjct: 378 SIIIGTHALIQENVTYNNLALAIIDEQHRFGVHQRLTLTAK----------------GN- 420
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
P +L M+ATPIPRTL L YGDM +++ITD P GR PI T I
Sbjct: 421 ------KPDMLVMTATPIPRTLVLTSYGDMDVSKITDKPIGRQPITTATI 464
>gi|357043497|ref|ZP_09105190.1| ATP-dependent DNA helicase RecG [Prevotella histicola F0411]
gi|355368389|gb|EHG15808.1| ATP-dependent DNA helicase RecG [Prevotella histicola F0411]
Length = 698
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 166/536 (30%), Positives = 247/536 (46%), Gaps = 95/536 (17%)
Query: 206 LLDKCISCVPGLS-KRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIG 264
+L + I +PG+ KR + G T R LL +FP Y D + + Q F+
Sbjct: 3 ILSQDIMYLPGVGPKRKEILSKELGITTYRDLLEYFPYKYVDRTKVYLISELSQDMPFV- 61
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK------- 317
G SF E +G +KK+I H
Sbjct: 62 -------QIKGQILSFEEADMG-------------------RRKKRIIAHFSDGHGICDL 95
Query: 318 -FFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSL 376
+F GT++ I +++G+ V GK N ++ +ID D L L
Sbjct: 96 VWFNGTKY--------IYQNYQIGKEYIVFGKPTFF--NGRFQFTHPDID---DASQLQL 142
Query: 377 RAKG-RPYPIYPSK---GGLNASLLRDTIARALQALPANFD-PVPKEITQEFGLLCLFDA 431
G +P+ I K G+N+ + + L + +P IT L+ DA
Sbjct: 143 NDMGMQPFYITTEKMKKAGINSRAMEKLTKMLISKLTTPLEETLPPFITTHLHLISRDDA 202
Query: 432 YMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNA 491
IH PK +D+ AR RL F+E FY+QL L + + + G + + + N
Sbjct: 203 MRKIHYPKSVDDTQRARVRLKFEELFYVQLNILRYASD---HRRKYRGYIFNHIGAQFNW 259
Query: 492 AYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFL 551
Y + LP+ LT +Q + EI D+ MNRLLQGDVG GKT+VA +
Sbjct: 260 FYT-----------KNLPFELTGAQKRVMHEIRADMASGRQMNRLLQGDVGSGKTLVALM 308
Query: 552 ACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMI 611
+ + I +GYQA M PTE+LA QH + + + L M ++ LLTG K+ + +
Sbjct: 309 SMLIAIDNGYQACMMAPTEILAEQHLQTIKEFLKGM-----NLRVELLTGIVKGKKRKEV 363
Query: 612 RKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGM 671
L G + +V+GTH++I +KV+F +L +A+VDEQ RFGV QR +KL+ S +
Sbjct: 364 LDGLMDGSVNIVVGTHAIIEDKVQFHSLGMAVVDEQHRFGVAQR----AKLWGKSEN--- 416
Query: 672 AMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
PHVL M+ATPIPRTLA+ +YGD+ ++ I +LPPGR PI+T
Sbjct: 417 ---------------PPHVLVMTATPIPRTLAMTIYGDLDVSVIDELPPGRKPIQT 457
>gi|153938732|ref|YP_001391791.1| ATP-dependent DNA helicase RecG [Clostridium botulinum F str.
Langeland]
gi|384462800|ref|YP_005675395.1| ATP-dependent DNA helicase RecG [Clostridium botulinum F str.
230613]
gi|152934628|gb|ABS40126.1| ATP-dependent DNA helicase RecG [Clostridium botulinum F str.
Langeland]
gi|295319817|gb|ADG00195.1| ATP-dependent DNA helicase RecG [Clostridium botulinum F str.
230613]
Length = 679
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 163/530 (30%), Positives = 252/530 (47%), Gaps = 100/530 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
I+ + G+ + QLE C + + LL +FPR Y + N D +++S +
Sbjct: 7 ITTLKGVGPKTKEQLEKCMIFNIMDLLLYFPRDYEFIDNYSKD-----------KLLSKK 55
Query: 271 GMKAGCSFSFLEVIVGCEIA----DTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
VI+ ++ D T +G + I I+ +K G+ F
Sbjct: 56 ------------VIIKVQVENIKRDIRTRTGKVLTTI-------IFNDGEKAIVGSWFNQ 96
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
P++K+ K+GE + G ++ R N + N +LK++ + + + P Y
Sbjct: 97 -PYIKNY---FKIGEEYVLQGSLKEYRGN----LTINNAQILKNKCTEEVEER-KIIPKY 147
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL 446
P KG L +LL + L + + +P + +++ L L + IH+P++ E +
Sbjct: 148 PLKGDLKNNLLIKLVDSVLTNIDIG-ENLPIWLIEKYKFLSLDKSIRTIHKPENQKELEE 206
Query: 447 ARKRLIFDEF--FYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK- 503
+ +RL F E + L++ L + LE EG S + +
Sbjct: 207 SIRRLKFQELLAYCLKIAFLKEYLE----------------------TATEGISFIVSEE 244
Query: 504 ---LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
L+ LP+ LT++Q + EI D ++ PMNRLLQGDVG GKT++A ++ VI +G
Sbjct: 245 INNLIEVLPFKLTNAQNKVLQEIFKDQEKEKPMNRLLQGDVGSGKTIIALISLFNVIKNG 304
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQ + PTE+LA QHYE LKL + + I LL GS V + I++ L+ G I
Sbjct: 305 YQGVMLAPTEILAVQHYEEALKLFKDFNLN-----IELLIGSIKVSSKKEIKEKLKEGKI 359
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
L+IGTH+LI + VEF L + I DEQ RFGV+QR + M+N S
Sbjct: 360 DLIIGTHALIEDDVEFYNLGMVITDEQHRFGVMQRSK---------------MLNKGKS- 403
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
L MSATPIPR+L L+LYGD+ L+ I +LPPGR I TY +
Sbjct: 404 -------VDTLVMSATPIPRSLTLSLYGDLDLSIIDELPPGRQKIDTYYV 446
>gi|409911861|ref|YP_006890326.1| ATP-dependent DNA helicase RecG [Geobacter sulfurreducens KN400]
gi|298505437|gb|ADI84160.1| ATP-dependent DNA helicase RecG [Geobacter sulfurreducens KN400]
Length = 767
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 161/533 (30%), Positives = 247/533 (46%), Gaps = 79/533 (14%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNA--QIDLDDGQYFIFIG 264
L+ + + G+ ++ L G T+ L+ P Y D + L G+ +F G
Sbjct: 65 LETPMQFIKGVGPKMAEILARKGIVTVEDALYLLPNRYEDRRQVVPMNRLRPGETCVFAG 124
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
E++S+ + F EV+ D + N + +K + ++ +
Sbjct: 125 EVVSADVVTTKGGRRFFEVMA----RDASGVMSFKWFNYHAAFMRKAWQPGRRGIFTGQV 180
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
T + + H +++ V A + + GR P
Sbjct: 181 TQYGLQREVH--HPDVDWLAEGETVEAAMARDPVGF-------------------GRLVP 219
Query: 385 IYPSKGGLNASLLRDTIARALQAL-PANFDPVPKEITQEFGLLCLFDAYMGIH------Q 437
+YP GLN LR + + P +P + +E LL L +A +H
Sbjct: 220 VYPLTEGLNQKALRKVMKEVVDRFAPCVESALPARVIRERALLPLAEALGAVHFPAADAD 279
Query: 438 PKHIDEA-DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG 496
P+ ++E D A + L+FDEFF+L+LG L+ G E +N Y
Sbjct: 280 PRALEEGRDPAHRTLVFDEFFFLELG---LALKRRGVTLEPGIAFS------VNHTY--- 327
Query: 497 WSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEV 556
TK LL+ LP++LT +Q ++EI D+ P PM+RL+QGDVGCGKT+VA LA +
Sbjct: 328 ----TKPLLKLLPFALTEAQRRVLAEIKADMMAPHPMHRLVQGDVGCGKTLVALLAALVA 383
Query: 557 IGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQ 616
+ +GYQ A M PTE+LA QHY ++ + + + +ALLT S K + +
Sbjct: 384 VENGYQVAIMAPTEILAEQHYLNIHRWCEQL-----GVTVALLTSSLKGKAKAGALERVA 438
Query: 617 TGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNS 676
G++ +VIGTH++I +KVEF L L IVDEQ RFGV+QRG K
Sbjct: 439 RGEVQIVIGTHAVIQDKVEFHRLGLGIVDEQHRFGVLQRGLLRKK--------------- 483
Query: 677 DGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYI 729
P +L M+ATPIPRTLA+ ++GD+SL+ I +LPPGR P++T I
Sbjct: 484 --------GENPDILVMTATPIPRTLAMTVFGDLSLSVIDELPPGRTPVETKI 528
>gi|182435707|ref|YP_001823426.1| ATP-dependent DNA helicase RecG [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|178464223|dbj|BAG18743.1| putative ATP-dependent DNA helicase [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 734
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 153/531 (28%), Positives = 236/531 (44%), Gaps = 92/531 (17%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQ--NAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEV 283
E+ +T+ LLHH+PR Y + A DL ++ + ++ +R
Sbjct: 25 EHLDLHTVGDLLHHYPRRYEERGRLTALADLPLDEHVTVVAQVADAR------------- 71
Query: 284 IVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKV---G 340
++ ++G+ K++ + L R + F + HK G
Sbjct: 72 ----------------ILMFNNGRGKRLEVTLTDG--SGRLQLVFFGHGVHKPHKELLPG 113
Query: 341 EFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAK---GRPYPIYPSKGGLNASLL 397
+GKV Y + D D+ + GR PIYP+ L++ +
Sbjct: 114 RQAMFAGKVSVFNRKMQLAHPTYQLLDASDADEATEAVDAFAGRLLPIYPACKQLDSWRI 173
Query: 398 RDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFF 457
+ L + DP+P + + G L +A + H+P+ + + AR RL +DE F
Sbjct: 174 AKAVDAVLPSARDAVDPLPASLREGRGFTSLPEALLKAHRPQTKADIEDARARLKWDEAF 233
Query: 458 YLQLG---RLY--QMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSL 512
LQ+ R Y L + +GLLD + LP++L
Sbjct: 234 VLQVALARRRYADTQLPAAARRPVADGLLDAFDA--------------------KLPFTL 273
Query: 513 TSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELL 572
T Q EI DL PM+RLLQG+VG GKT+VA A + V+ +G QAA + PTE+L
Sbjct: 274 TEGQQKVSKEIFDDLATEHPMHRLLQGEVGSGKTMVALRAMLAVVDAGGQAAMLAPTEVL 333
Query: 573 ATQHYEHLLKLLDNMEE------DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGT 626
A QH+ + +++ + E H K+ LLTGS R DL TG+ +VIGT
Sbjct: 334 AQQHHRSITEMMGELAEGGMLGGSDHGTKVVLLTGSMGTAARRQALLDLVTGEAGIVIGT 393
Query: 627 HSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHM 686
H+LI +KV+F L L +VDEQ RFGV QR SK
Sbjct: 394 HALIEDKVQFHDLGLVVVDEQHRFGVEQRDALRSK----------------------GKQ 431
Query: 687 APHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGY 737
PH+L M+ATPIPRT+A+ ++GD+ + + LP GR PI ++++ +K +
Sbjct: 432 PPHLLVMTATPIPRTVAMTVFGDLETSVLDQLPAGRSPIASHVVPAKDKPH 482
>gi|163844733|ref|YP_001622388.1| ATP-dependent DNA helicase RecG [Brucella suis ATCC 23445]
gi|163675456|gb|ABY39566.1| ATP-dependent DNA helicase RecG [Brucella suis ATCC 23445]
Length = 706
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 145/396 (36%), Positives = 197/396 (49%), Gaps = 57/396 (14%)
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRD 399
GE V VSGKV +Y I + D L L P+YP GL+ L
Sbjct: 126 GETVIVSGKVEWFNGRASMVHPDY-IASMDDAASLPLVE-----PVYPLTAGLSPKTLGR 179
Query: 400 TIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA-----RKRLIFD 454
I AL +P + + + G A +HQP+ D D+A R+RL +D
Sbjct: 180 AIKEALTRVPVLPEWIDAPLLAREGFPAFQQALNTLHQPE--DPGDIALESITRRRLAYD 237
Query: 455 EFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTS 514
EF QL L + + RL+ +EG ++ +++R LPY LT
Sbjct: 238 EFLAGQLALA----------------LVRAKTRRLSGRPLEGTGNIVAEIMRHLPYRLTK 281
Query: 515 SQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLAT 574
+Q A+ EII DLK P M RLLQGDVG GKTVV L+ SG Q+A M PTE+LA
Sbjct: 282 AQEQAVREIITDLKSPQRMLRLLQGDVGSGKTVVGLLSMAHAAESGGQSALMAPTEVLAR 341
Query: 575 QHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKV 634
QH+ + L +K K ALLTG ++ + + L++G+I +VIGTH+L EKV
Sbjct: 342 QHFATIAPL-----AEKAGLKAALLTGREKGRERNAVLEGLKSGEIDIVIGTHALFQEKV 396
Query: 635 EFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMS 694
E+ L I+DEQ RFGV QR M+ + GS AP +L M+
Sbjct: 397 EYHDLVFVIIDEQHRFGVHQR----------------LMLTAKGS-------APDMLVMT 433
Query: 695 ATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
ATPIPRTL L +GDM ++++T+ P GR PI T I+
Sbjct: 434 ATPIPRTLVLTAFGDMDVSKLTEKPVGRQPITTAIV 469
>gi|400756495|ref|NP_952379.2| ATP-dependent DNA helicase RecG [Geobacter sulfurreducens PCA]
gi|399107806|gb|AAR34702.2| ATP-dependent DNA helicase RecG [Geobacter sulfurreducens PCA]
Length = 767
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 161/533 (30%), Positives = 247/533 (46%), Gaps = 79/533 (14%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNA--QIDLDDGQYFIFIG 264
L+ + + G+ ++ L G T+ L+ P Y D + L G+ +F G
Sbjct: 65 LETPMQFIKGVGPKMAEILARKGIVTVEDALYLLPNRYEDRRQVVPMNRLRPGETCVFAG 124
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
E++S+ + F EV+ D + N + +K + ++ +
Sbjct: 125 EVVSADVVTTKGGRRFFEVMA----RDASGVMSFKWFNYHAAFMRKAWQPGRRGIFTGQV 180
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
T + + H +++ V A + + GR P
Sbjct: 181 TQYGLQREVH--HPDVDWLAEGETVEAAMARDPVGF-------------------GRLVP 219
Query: 385 IYPSKGGLNASLLRDTIARALQAL-PANFDPVPKEITQEFGLLCLFDAYMGIH------Q 437
+YP GLN LR + + P +P + +E LL L +A +H
Sbjct: 220 VYPLTEGLNQKALRKVMKEVVDRFAPCVESALPARVIRERALLPLAEALGAVHFPAADAD 279
Query: 438 PKHIDEA-DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG 496
P+ ++E D A + L+FDEFF+L+LG L+ G E +N Y
Sbjct: 280 PRALEEGRDPAHRTLVFDEFFFLELG---LALKRRGVTLEPGIAFS------VNHTY--- 327
Query: 497 WSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEV 556
TK LL+ LP++LT +Q ++EI D+ P PM+RL+QGDVGCGKT+VA LA +
Sbjct: 328 ----TKPLLKLLPFALTEAQRRVLAEIKADMMAPHPMHRLVQGDVGCGKTLVALLAALVA 383
Query: 557 IGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQ 616
+ +GYQ A M PTE+LA QHY ++ + + + +ALLT S K + +
Sbjct: 384 VENGYQVAIMAPTEILAEQHYLNIHRWCEQL-----GVTVALLTSSLKGKAKAGALERVA 438
Query: 617 TGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNS 676
G++ +VIGTH++I +KVEF L L IVDEQ RFGV+QRG K
Sbjct: 439 RGEVQIVIGTHAVIQDKVEFHRLGLGIVDEQHRFGVLQRGLLRKK--------------- 483
Query: 677 DGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYI 729
P +L M+ATPIPRTLA+ ++GD+SL+ I +LPPGR P++T I
Sbjct: 484 --------GENPDILVMTATPIPRTLAMTVFGDLSLSVIDELPPGRTPVETKI 528
>gi|399048061|ref|ZP_10739791.1| ATP-dependent DNA helicase RecG [Brevibacillus sp. CF112]
gi|398053975|gb|EJL46121.1| ATP-dependent DNA helicase RecG [Brevibacillus sp. CF112]
Length = 684
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 163/527 (30%), Positives = 255/527 (48%), Gaps = 98/527 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIISS 269
+S + G+ + G +++ LL +FP Y D + + ++ DG+ G
Sbjct: 9 VSLLHGVGEERAKAFAGLGIHSIGDLLEYFPSRYEDYRVRDLTEVKDGERVTLAG----- 63
Query: 270 RGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPF 329
T G+ V K+K L +K T++ F
Sbjct: 64 ------------------------TVYGEPSVRFYG--KRKSRLSVKMVMDRVVVTAVWF 97
Query: 330 LKS-IEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRA--KGRPYPIY 386
++ ++ + G+ + V+GK ++ + I V + + S RA +G P+Y
Sbjct: 98 NQTFVKSRLSPGKEILVTGK---------WDKHKLQITVSEMTEVDSERATKRGELAPVY 148
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPKHIDEAD 445
P G + +LLR +I +AL+ + + P +I + + L+ A+ IH P++ ++
Sbjct: 149 PLGGDMTHTLLRKSIQQALRQYGKDIPEILPPDIVERYRLMPRVAAFHSIHFPENAEDGR 208
Query: 446 LARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGL-----LDKYRKPRLNAAYMEGWSSL 500
AR+R++F+E F QL Q L + Q + EG+ +D+ R+
Sbjct: 209 QARRRIMFEELFLFQLK--IQTLRRINRQ-QSEGVALAIPMDEVRQ-------------- 251
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
++ LP+ LT +Q + EI+ D++ P MNRLLQGDVG GKTVVA +A + + +G
Sbjct: 252 ---FVKGLPFPLTDAQKRVVKEILDDMRAPHAMNRLLQGDVGSGKTVVAAIALLAAVKAG 308
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQ A MVPTE+LA QH + L KLL + + ++ALL+GS K+ R + LQ G I
Sbjct: 309 YQGALMVPTEILAEQHVQSLTKLLAD-----YGIEVALLSGSLTAKRRREVIGSLQMGLI 363
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+V+GTH+LI E V FS L L I DEQ RFGV QR +K
Sbjct: 364 DVVVGTHALIQEDVFFSRLGLVITDEQHRFGVEQRRILRNK------------------- 404
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI+T
Sbjct: 405 ----GLTPDVLFMTATPIPRTLAITAFGDMDVSTIDQMPAGRKPIET 447
>gi|227432482|ref|ZP_03914468.1| ATP-dependent DNA helicase RecG [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
gi|227351753|gb|EEJ41993.1| ATP-dependent DNA helicase RecG [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
Length = 676
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 165/531 (31%), Positives = 250/531 (47%), Gaps = 90/531 (16%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L+ ++ +PG+ + L G +T+ L+++FP Y D +GE
Sbjct: 4 LNDNVNILPGVGPKRLDALHKIGIFTIEDLINYFPFRYED----------------LGER 47
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTR--F 324
+ S + G +F ++ S VV + G++ + L R F
Sbjct: 48 LPSETLD-GEKATFKGIV-----------SKPAVVTL-FGKRSQTRFGLMIDHENVRVLF 94
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYP 384
+ P+ I +VG+ V V G Y+ + + +K + +A P
Sbjct: 95 FNQPW---IAQNVEVGQEVAVYGT---------YDAAKVFLTGMK----VISKASNELDP 138
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
IYPS ++A +R I A + VP +I Q++ LL +H P +++
Sbjct: 139 IYPSSKQISAKTIRHLIEIAWDDVRGTVGSLVPDKIRQKYRLLDRNTQIENMHFPADMEQ 198
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
A LAR+ + F+EFF Q+ RL Q+L+ F EG+ Y LN K
Sbjct: 199 AKLARRSIAFEEFFIFQM-RL-QLLKLADKNFSGEGI--NYDSKALN------------K 242
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
LP++LT +Q +SEI+ D K+PV MNRLLQGDVG GKTVVA +A V+ +G QA
Sbjct: 243 FEAGLPFTLTVAQQKVVSEILKDQKRPVHMNRLLQGDVGSGKTVVAAIALYAVVTAGMQA 302
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A M PTE+LA QH +L + + D +I LLT R + +DL G I ++
Sbjct: 303 ALMAPTEILAQQHAINLASMFEKSGVD---IRIELLTSGMKAAARRQLLEDLADGTIDIL 359
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
+GTH+L+ V+F L LA++DEQ RFGV QR + +
Sbjct: 360 VGTHALLQPDVKFHHLGLAVIDEQHRFGVNQRAKLR-----------------------E 396
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
+ P +LAM+ATPIPRTL++ YG+M ++ I LP GR I+T I N+
Sbjct: 397 NGVNPDILAMTATPIPRTLSITAYGEMDVSIIDQLPNGRKQIQTRKISHNQ 447
>gi|336403830|ref|ZP_08584538.1| ATP-dependent DNA helicase RecG [Bacteroides sp. 1_1_30]
gi|335944642|gb|EGN06460.1| ATP-dependent DNA helicase RecG [Bacteroides sp. 1_1_30]
Length = 698
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 172/532 (32%), Positives = 257/532 (48%), Gaps = 97/532 (18%)
Query: 209 KCISCV-PGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEII 267
K IS V P + L +LE Y+L L+++FP Y D +I EI
Sbjct: 10 KFISGVGPQKAAVLNKELE---IYSLHDLIYYFPYKYIDRSR----------IYYIHEI- 55
Query: 268 SSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ ++++ EI ET I G+++++ H F GT +
Sbjct: 56 -------DGNMPYIQL--KGEILGFET--------IGEGRQRRLTAH---FSDGTGVVDL 95
Query: 328 PFLKSIE---GKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG-RPY 383
+ + I+ GK+K+ E + GK N + ++D +DL L + G +PY
Sbjct: 96 VWFQGIKYILGKYKLHEEYIIFGKPTVF--NGRINVAHPDVD---KPEDLKLSSVGLQPY 150
Query: 384 PIYPSK---GGLNASLLRDTIARALQALPANFDPVPKEITQ----EFGLLCLFDAYMGIH 436
K LN+ + +A +Q + +P+P+ ++ E L+ L +A IH
Sbjct: 151 YNTTEKMKRSFLNSHAIEKMMATVIQQIQ---EPLPETLSSKLLAEHHLMPLTEALRNIH 207
Query: 437 QPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG 496
P + D A+ RL F+E FY+QL L ++ K+ R+ R E
Sbjct: 208 FPTNPDVLRRAQYRLKFEELFYVQLNIL---------RYAKD------RQKRYRGYIFEK 252
Query: 497 WSSLTKKLL-RALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
+ + LP+ LT +Q + EI D+ MNRLLQGDVG GKT+VA ++ +
Sbjct: 253 VGDVFNTFYTKNLPFQLTGAQKRVLKEIRNDVGSGRQMNRLLQGDVGSGKTLVALMSMLL 312
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
+ +GYQA M PTE+LA QHYE + +LL M+ ++ LLTGS K+ I L
Sbjct: 313 ALDNGYQACMMAPTEILANQHYETIKELLFGMD-----IRVELLTGSIKGKRREAILTGL 367
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
TGD+ ++IGTH++I + V FS+L ++DEQ RFGV QR R SK
Sbjct: 368 LTGDVKILIGTHAVIEDTVNFSSLGFVVIDEQHRFGVAQRARLWSK-------------- 413
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ P PHVL M+ATPIPRTLA+ LYGD+ ++ I +LPPGR PI T
Sbjct: 414 -NVQP-------PHVLVMTATPIPRTLAMTLYGDLDVSVIDELPPGRKPITT 457
>gi|29349332|ref|NP_812835.1| ATP-dependent DNA helicase RecG [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341240|gb|AAO79029.1| ATP-dependent DNA helicase recG [Bacteroides thetaiotaomicron
VPI-5482]
Length = 698
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 153/445 (34%), Positives = 223/445 (50%), Gaps = 81/445 (18%)
Query: 303 IDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIE---GKHKVGEFVCVSGKVRAMRSNNHYE 359
I G+++++ H F GT + + + I+ GK+K+ E + GK N
Sbjct: 74 IGEGRQRRLTAH---FSDGTGIVDLVWFQGIKYILGKYKLHEEYIIFGKPTVF--NGRIN 128
Query: 360 MREYNIDVLKDEDDLSLRAKG-RPYPIYPSK---GGLNASLLRDTIARALQALPANFDPV 415
+ +ID DDL L + G +PY K LN+ + +A +Q + +P+
Sbjct: 129 VAHPDID---KPDDLKLSSVGLQPYYNTTEKMKRSFLNSHAIEKMMATVIQQIQ---EPL 182
Query: 416 PK----EITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLG--------- 462
P+ +I + L+ L +A IH P + D A+ RL F+E FY+QL
Sbjct: 183 PETLSPKILSDHHLMPLTEALRNIHFPTNPDSLRRAQYRLKFEELFYVQLNILCYAKDRQ 242
Query: 463 RLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISE 522
R Y+ G FE+ G + N Y + LP+ LT +Q + E
Sbjct: 243 RRYR-----GYIFERVGDV-------FNTFYSQN-----------LPFQLTGAQKRVLKE 279
Query: 523 IIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLK 582
I D+ MNRLLQGDVG GKT+VA ++ + + +G+QA M PTE+LA QHYE + +
Sbjct: 280 IRNDVGSGRQMNRLLQGDVGSGKTLVALMSMLLALDNGFQACMMAPTEILANQHYETIKE 339
Query: 583 LLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLA 642
LL M+ ++ LLTGS K+ I L TGD+ ++IGTH++I + V FS+L L
Sbjct: 340 LLFGMD-----IRVELLTGSIKGKKREAILTGLLTGDVKILIGTHAVIEDTVNFSSLGLV 394
Query: 643 IVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTL 702
++DEQ RFGV QR R +K PHVL M+ATPIPRTL
Sbjct: 395 VIDEQHRFGVAQRARLWTK----------------------NIQPPHVLVMTATPIPRTL 432
Query: 703 ALALYGDMSLTQITDLPPGRIPIKT 727
A+ LYGD+ ++ I +LPPGR PI T
Sbjct: 433 AMTLYGDLDVSVIDELPPGRKPITT 457
>gi|423347562|ref|ZP_17325248.1| ATP-dependent DNA helicase RecG [Parabacteroides merdae CL03T12C32]
gi|409216499|gb|EKN09484.1| ATP-dependent DNA helicase RecG [Parabacteroides merdae CL03T12C32]
Length = 698
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 154/436 (35%), Positives = 214/436 (49%), Gaps = 70/436 (16%)
Query: 317 KFFRGTRFTSIPFLKSIE---GKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDD 373
KF GT + + K I K K G V GK + Y + +ID L D
Sbjct: 85 KFTDGTGTIDLVWFKGINYVLDKIKTGVDYIVFGK--PTEFGHIYNIPHPDIDPLDQADK 142
Query: 374 LSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANF---------DPVPKEITQEFG 424
+ A G P Y + + S L +RA+Q L + +P ++
Sbjct: 143 V---ANGLT-PFYNTSEKMKKSFLN---SRAIQNLQYTLLSGLNWTLPETLPPDVLNRIR 195
Query: 425 LLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRL----YQMLEGLGTQFEKEGL 480
++ +A +H P+ +D+ A+ RL FDE F++QL L + L+ G F G
Sbjct: 196 MMSFPEAIRNVHFPESVDKLRKAQLRLKFDELFFIQLNILRTSNLRKLKLRGIVFPSVG- 254
Query: 481 LDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGD 540
N Y E LP+ LT++Q + EI D+ MNRLLQGD
Sbjct: 255 ------DYFNTFYKE-----------YLPFELTNAQKRVVREIRADMGSGRQMNRLLQGD 297
Query: 541 VGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLT 600
VG GKT+VA L+ + + + QA M PTE+LATQHY ++ L +M+ K+ALLT
Sbjct: 298 VGSGKTLVALLSMLLAVDNHCQACMMAPTEILATQHYATVMGFLKDMD-----IKVALLT 352
Query: 601 GSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNS 660
GST K+ I + +G+I +VIGTH+LI E V FS+L LAI+DEQ RFGV QR R +
Sbjct: 353 GSTKKKERNKILPAIASGEIQIVIGTHALIEETVVFSSLGLAIIDEQHRFGVEQRSRLWT 412
Query: 661 KLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPP 720
K + PHVL M+ATPIPRTLA+ LYGD+ ++ I +LPP
Sbjct: 413 K----------------------NAVVPHVLVMTATPIPRTLAMTLYGDLDVSVIDELPP 450
Query: 721 GRIPIKTYIIEGNEKG 736
GR PI+T N+K
Sbjct: 451 GRKPIQTVHRYDNKKA 466
>gi|325263998|ref|ZP_08130731.1| ATP-dependent DNA helicase RecG [Clostridium sp. D5]
gi|324031036|gb|EGB92318.1| ATP-dependent DNA helicase RecG [Clostridium sp. D5]
Length = 686
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 163/534 (30%), Positives = 249/534 (46%), Gaps = 87/534 (16%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
IS + G+ ++ E G T+ LL ++PR Y D+ D + +GE + +
Sbjct: 7 ISTLKGIGEKTQALFEKAGVRTIGDLLRYYPRGY--------DVYDDP--VLVGEAVEGK 56
Query: 271 -GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK-FFRGTRFTSIP 328
G F +++ G + + + K + LK +FR +P
Sbjct: 57 TATVTGAIFGRVQL------------GGSRNMQVTTLYVKDLTGTLKVIWFR------MP 98
Query: 329 FLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPS 388
FLK+ + G + + G++ R E E K E+ + P+YP
Sbjct: 99 FLKNTLAR---GGIITLRGRIVRKRDGLVMEHPEIFYPSAKYEEK-----RNTLQPVYPL 150
Query: 389 KGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLAR 448
GL + ++ + +A++ L + +P+EI + L A GIH P+ +E AR
Sbjct: 151 TAGLTNNAVKKAMMQAMEYLDLKQEFLPEEIRMRYHLAEYNYAVRGIHFPETKEEFYHAR 210
Query: 449 KRLIFDEFFYLQLGRLYQMLEGLGTQFEK-EGLLDKYRKPRLNAAYMEGWSSLTKKLLRA 507
+RL+F+EF L L L T+ +K E +P ++ K L +
Sbjct: 211 ERLVFEEFLIFILS-----LRKLKTREDKTENCFKFVERPEID------------KFLES 253
Query: 508 LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMV 567
LPY LT++Q +E+ D+ P M+RL+QGDVG GKT+VA L M +G+Q A M
Sbjct: 254 LPYELTNAQKKVWNEMKRDMSGPHVMSRLVQGDVGSGKTIVALLGLMYAGLNGFQGAMMA 313
Query: 568 PTELLATQHYEHLLKLLDNMEEDKHKP-KIALLTGSTPVKQSRMIRKDLQTGDITLVIGT 626
PTE+LA QHYE+ + +M E P K LLTGS K+ R + + +G +++GT
Sbjct: 314 PTEVLAKQHYEN----ITSMFEKYGIPLKTELLTGSMSAKEKREAYERISSGAADIIVGT 369
Query: 627 HSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHM 686
H+LI EK + L L + DEQ RFGV QR K
Sbjct: 370 HALIQEKAVYRNLALVVTDEQHRFGVKQRETLAGK-----------------------GQ 406
Query: 687 APHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENV 740
PH+L MSATPIPRTLA+ LYGD+ ++ I +LP R+PIK ++ + GY N
Sbjct: 407 MPHILVMSATPIPRTLAIILYGDLDISVIDELPSNRLPIKNCVV---DTGYRNT 457
>gi|298480238|ref|ZP_06998436.1| ATP-dependent DNA helicase RecG [Bacteroides sp. D22]
gi|298273519|gb|EFI15082.1| ATP-dependent DNA helicase RecG [Bacteroides sp. D22]
Length = 698
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 172/532 (32%), Positives = 257/532 (48%), Gaps = 97/532 (18%)
Query: 209 KCISCV-PGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEII 267
K IS V P + L +LE Y+L L+++FP Y D +I EI
Sbjct: 10 KFISGVGPQKAAVLNKELE---IYSLHDLIYYFPYKYIDRSR----------IYYIHEI- 55
Query: 268 SSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ ++++ EI ET I G+++++ H F GT +
Sbjct: 56 -------DGNMPYIQL--KGEILGFET--------IGEGRQRRLTAH---FSDGTGVVDL 95
Query: 328 PFLKSIE---GKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG-RPY 383
+ + I+ GK+K+ E + GK N + ++D +DL L + G +PY
Sbjct: 96 VWFQGIKYILGKYKLHEEYIIFGKPTVF--NGRINVAHPDVD---KPEDLKLSSVGLQPY 150
Query: 384 PIYPSK---GGLNASLLRDTIARALQALPANFDPVPKEITQ----EFGLLCLFDAYMGIH 436
K LN+ + +A +Q + +P+P+ ++ E L+ L +A IH
Sbjct: 151 YNTTEKMKRSFLNSHAIEKMMATVIQQIQ---EPLPETLSSKLLAEHHLMPLTEALRNIH 207
Query: 437 QPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG 496
P + D A+ RL F+E FY+QL L ++ K+ R+ R E
Sbjct: 208 FPTNPDVLRRAQYRLKFEELFYVQLNIL---------RYAKD------RQKRYRGYIFEK 252
Query: 497 WSSLTKKLL-RALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
+ + LP+ LT +Q + EI D+ MNRLLQGDVG GKT+VA ++ +
Sbjct: 253 VGDVFNTFYTKNLPFQLTGAQKRVLKEIRNDVGSGRQMNRLLQGDVGSGKTLVALMSMLL 312
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
+ +GYQA M PTE+LA QHYE + +LL M+ ++ LLTGS K+ I L
Sbjct: 313 ALDNGYQACMMAPTEILANQHYETIKELLFGMD-----IRVELLTGSIKGKRREAILTGL 367
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
TGD+ ++IGTH++I + V FS+L ++DEQ RFGV QR R SK
Sbjct: 368 LTGDVKILIGTHAVIEDTVNFSSLGFVVIDEQHRFGVAQRARLWSK-------------- 413
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ P PHVL M+ATPIPRTLA+ LYGD+ ++ I +LPPGR PI T
Sbjct: 414 -NVQP-------PHVLVMTATPIPRTLAMTLYGDLDVSVIDELPPGRKPITT 457
>gi|212691804|ref|ZP_03299932.1| hypothetical protein BACDOR_01299 [Bacteroides dorei DSM 17855]
gi|237708604|ref|ZP_04539085.1| ATP-dependent DNA helicase RecG [Bacteroides sp. 9_1_42FAA]
gi|265755202|ref|ZP_06089972.1| ATP-dependent DNA helicase RecG [Bacteroides sp. 3_1_33FAA]
gi|345513532|ref|ZP_08793052.1| ATP-dependent DNA helicase RecG [Bacteroides dorei 5_1_36/D4]
gi|423231097|ref|ZP_17217500.1| ATP-dependent DNA helicase RecG [Bacteroides dorei CL02T00C15]
gi|423242477|ref|ZP_17223585.1| ATP-dependent DNA helicase RecG [Bacteroides dorei CL03T12C01]
gi|423246772|ref|ZP_17227824.1| ATP-dependent DNA helicase RecG [Bacteroides dorei CL02T12C06]
gi|212665705|gb|EEB26277.1| ATP-dependent DNA helicase RecG [Bacteroides dorei DSM 17855]
gi|229437588|gb|EEO47665.1| ATP-dependent DNA helicase RecG [Bacteroides dorei 5_1_36/D4]
gi|229457304|gb|EEO63025.1| ATP-dependent DNA helicase RecG [Bacteroides sp. 9_1_42FAA]
gi|263234344|gb|EEZ19934.1| ATP-dependent DNA helicase RecG [Bacteroides sp. 3_1_33FAA]
gi|392629212|gb|EIY23222.1| ATP-dependent DNA helicase RecG [Bacteroides dorei CL02T00C15]
gi|392634649|gb|EIY28565.1| ATP-dependent DNA helicase RecG [Bacteroides dorei CL02T12C06]
gi|392639270|gb|EIY33096.1| ATP-dependent DNA helicase RecG [Bacteroides dorei CL03T12C01]
Length = 698
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 131/344 (38%), Positives = 188/344 (54%), Gaps = 50/344 (14%)
Query: 389 KGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA 447
+G LN+ L + AL L + +P ++ +E L+ L +A IH PK+ + A
Sbjct: 159 RGFLNSHGLERLMKNALALLQEPLAETLPPQLVEEHHLMSLDEAIRNIHFPKNPELLRKA 218
Query: 448 RKRLIFDEFFYLQLGRLY----QMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
+ RL F+E FY+QL L + + G +FE+ G + N Y +
Sbjct: 219 QYRLKFEELFYVQLNILRYSKDRQRKYRGLRFERVGEI-------FNTFYSQN------- 264
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
LP+ LT +Q I EI D+ MNRLLQGDVG GKT+VA ++ + + +GYQA
Sbjct: 265 ----LPFELTGAQKRVIKEIRKDMGSGRQMNRLLQGDVGSGKTLVALMSMLIALDNGYQA 320
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
M PTE+LA QHYE + K L M+ ++ LL GS K+ I +DL TGD+ ++
Sbjct: 321 CMMAPTEILAAQHYETIRKFLFGMD-----VRVELLMGSVKGKKREKILRDLLTGDVQIL 375
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
IGTH+++ + V FS+L + ++DEQ RFGV QR + SK + P
Sbjct: 376 IGTHAVLEDTVGFSSLGMVVIDEQHRFGVAQRAKLWSK---------------NVCP--- 417
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
PHVL M+ATPIPRTLA+ LYGD+ ++ I +LPPGR PI+T
Sbjct: 418 ----PHVLVMTATPIPRTLAMTLYGDLDVSVIDELPPGRKPIQT 457
>gi|390942450|ref|YP_006406211.1| ATP-dependent DNA helicase RecG [Belliella baltica DSM 15883]
gi|390415878|gb|AFL83456.1| ATP-dependent DNA helicase RecG [Belliella baltica DSM 15883]
Length = 697
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 154/440 (35%), Positives = 222/440 (50%), Gaps = 65/440 (14%)
Query: 300 VVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYE 359
V I G+KK++ H+ F T + + K I+ K V G V
Sbjct: 71 VETIGDGRKKRLVAHI---FDETGEMELTWFKGIQWVIKK----LVPGAVFVFFGKPAKY 123
Query: 360 MREYNIDVLKDEDDLSLRAKGRPY--PIYPSKGGLNASLLRDT-IARALQALPANFDP-- 414
R+++I + D L+ + R + P+YP+ L A L I+R ++ L A+ P
Sbjct: 124 GRKFSI-AHPEMDVLTAAQEERSFFQPVYPTTEKLRARFLDSKGISRIMEGLIASAYPQI 182
Query: 415 ---VPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQML--- 468
+P+ + Q F L+ +A IH P++ + AR RL F+EFFY+QL L L
Sbjct: 183 QETMPENVLQRFNLIPKKEALRQIHFPENPEILKRARYRLKFEEFFYVQLRLLKLKLTRT 242
Query: 469 -EGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDL 527
+ G + LL K+ K L P+ LT +Q + E D+
Sbjct: 243 EKSAGQILNQTELLTKFYKEHL-------------------PFELTEAQKRVVRESFGDM 283
Query: 528 KQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNM 587
K MNRL+QGDVG GKT+VAF+ + I SG QA M PTE+LA QHYE L + D M
Sbjct: 284 KSGKQMNRLIQGDVGSGKTMVAFICILIAISSGAQACLMAPTEILANQHYEGLKEYADLM 343
Query: 588 EEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQ 647
+ IALLTGS ++I + L +G++ ++IGTH+L+ + V+F L LAIVDEQ
Sbjct: 344 GLN-----IALLTGSVKKSARKVIHETLLSGNLHILIGTHALLEDIVQFKNLGLAIVDEQ 398
Query: 648 QRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALY 707
RFGV QR + +K ++ PHVL M+ATPIPRTLA+ LY
Sbjct: 399 HRFGVAQRAKLWAK---------------------NERFIPHVLVMTATPIPRTLAMTLY 437
Query: 708 GDMSLTQITDLPPGRIPIKT 727
GD+ ++ I ++P GR PI+T
Sbjct: 438 GDLDISVIDEMPLGRKPIQT 457
>gi|313887889|ref|ZP_07821568.1| ATP-dependent DNA helicase RecG [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312846055|gb|EFR33437.1| ATP-dependent DNA helicase RecG [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 676
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 166/522 (31%), Positives = 239/522 (45%), Gaps = 102/522 (19%)
Query: 221 LYHQLENCGFYTLRKLLHHFPRTYAD------LQNAQIDLDDGQYFIFIGEIISSRGMKA 274
L+H+L G YT+ LLH +PR Y D + A+I + + + I + +R ++
Sbjct: 20 LFHKL---GIYTIEDLLHFYPRRYEDSSKVTRVSEAKIG-EKNTFRVRILSKLQNRRIRK 75
Query: 275 GCSF-SFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSI 333
G + SFL E SG+ ++ YLH K +P
Sbjct: 76 GLTLTSFL----------AEDESGE----VELSFFNAFYLHNK---------ILP----- 107
Query: 334 EGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLN 393
G V GK R E E+ +L+ G+ PIY GLN
Sbjct: 108 ------GRCYLVYGKADYFRGRVTMSSPEI-------EEVDNLKKLGKISPIYNLTEGLN 154
Query: 394 ASLLRDTIARALQALPANF--DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRL 451
+ + Q + N + +PKEI +++ L DA IH PK AR+RL
Sbjct: 155 NFVFEKVVE---QVIGENLFRENLPKEILEKYSFLGKNDAIRAIHYPKSRKNYIQARERL 211
Query: 452 IFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYS 511
I++E F FE L +K + R +A E + + LP+
Sbjct: 212 IYEELFL----------------FELSILKNKVQNERRDAIKFEIKDQVFD-FINKLPFK 254
Query: 512 LTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTEL 571
LT Q + I EI D+K+ +NRL+QGDVG GKT++A + +GYQ++ M PTE+
Sbjct: 255 LTEGQDTVIKEIFSDMKEGKAINRLIQGDVGSGKTIIAIIIMYLAYLNGYQSSIMAPTEI 314
Query: 572 LATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIA 631
LA QH+E ++LL+ + K+ LL GST K R I +L+ G I ++IGTH+LI
Sbjct: 315 LAKQHFESFVELLEPL-----GIKVGLLIGSTSKKAKRDILDNLEMGSIDILIGTHALIE 369
Query: 632 EKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVL 691
E V F L + ++DEQ RFGVVQR +K N D + L
Sbjct: 370 ENVVFKKLGVNVIDEQHRFGVVQRNMLQNK-------------NKDAA----------TL 406
Query: 692 AMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN 733
MSATPIPR+L+L LY D+ ++ I +P GR PIKT I N
Sbjct: 407 VMSATPIPRSLSLVLYADLDVSIIKSMPKGRKPIKTIAINEN 448
>gi|237719141|ref|ZP_04549622.1| ATP-dependent DNA helicase recG [Bacteroides sp. 2_2_4]
gi|229451520|gb|EEO57311.1| ATP-dependent DNA helicase recG [Bacteroides sp. 2_2_4]
Length = 698
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 172/532 (32%), Positives = 257/532 (48%), Gaps = 97/532 (18%)
Query: 209 KCISCV-PGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEII 267
K IS V P + L +LE Y+L L+++FP Y D +I EI
Sbjct: 10 KFISGVGPQKAAVLNKELE---IYSLHDLIYYFPYKYIDRSR----------IYYIHEI- 55
Query: 268 SSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ ++++ EI ET I G+++++ H F GT +
Sbjct: 56 -------DGNMPYIQL--KGEILGFET--------IGEGRQRRLTAH---FSDGTGVVDL 95
Query: 328 PFLKSIE---GKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG-RPY 383
+ + I+ GK+K+ E + GK N + ++D +DL L + G +PY
Sbjct: 96 VWFQGIKYILGKYKLHEEYIIFGKPTVF--NGRINVAHPDVD---KPEDLKLSSVGLQPY 150
Query: 384 PIYPSK---GGLNASLLRDTIARALQALPANFDPVPKEITQ----EFGLLCLFDAYMGIH 436
K LN+ + +A +Q + +P+P+ ++ E L+ L +A IH
Sbjct: 151 YNTTEKMKRSFLNSHAIEKMMATVIQQIQ---EPLPETLSSKLLAEHHLMPLTEALRNIH 207
Query: 437 QPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG 496
P + D A+ RL F+E FY+QL L ++ K+ R+ R E
Sbjct: 208 FPTNPDVLRRAQYRLKFEELFYVQLNIL---------RYAKD------RQKRYRGYIFEK 252
Query: 497 WSSLTKKLL-RALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
+ + LP+ LT +Q + EI D+ MNRLLQGDVG GKT+VA ++ +
Sbjct: 253 VGDVFNTFYTKNLPFQLTGAQKRVLKEIRNDVGSGRQMNRLLQGDVGSGKTLVALMSMLL 312
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
+ +GYQA M PTE+LA QHYE + +LL M+ ++ LLTGS K+ I L
Sbjct: 313 ALDNGYQACMMAPTEILANQHYETIKELLFGMD-----IRVELLTGSIKGKRREAILTGL 367
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
TGD+ ++IGTH++I + V FS+L ++DEQ RFGV QR R SK
Sbjct: 368 LTGDVKILIGTHAVIEDTVNFSSLGFVVIDEQHRFGVAQRARLWSK-------------- 413
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ P PHVL M+ATPIPRTLA+ LYGD+ ++ I +LPPGR PI T
Sbjct: 414 -NVQP-------PHVLVMTATPIPRTLAMTLYGDLDVSVIDELPPGRKPITT 457
>gi|408371353|ref|ZP_11169120.1| ATP-dependent DNA helicase RecG [Galbibacter sp. ck-I2-15]
gi|407743183|gb|EKF54763.1| ATP-dependent DNA helicase RecG [Galbibacter sp. ck-I2-15]
Length = 700
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/350 (36%), Positives = 184/350 (52%), Gaps = 49/350 (14%)
Query: 385 IYPS-----KGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQP 438
IYPS + G++ ++ + + A F + +P+ I+QE L+ A IH P
Sbjct: 151 IYPSTEKLAQKGISNRVIIKLMEQLFMATKGRFLENLPQSISQELKLISKSKAMFNIHFP 210
Query: 439 KHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWS 498
+ D A+ RL F+E FY+QL L + + RK ++ E
Sbjct: 211 QSQDLLSRAQYRLKFEELFYIQLQLLSKNIN---------------RKSKIKGYVFETVG 255
Query: 499 SLTKKLLRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
K LP+ LT +Q I EI DL MNRLLQGDVG GKT+VA ++ + I
Sbjct: 256 VSFKTFYDTYLPFELTGAQKRVIKEIRNDLGSGAQMNRLLQGDVGSGKTIVALMSMLLAI 315
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
+G+Q + PTE+LATQHY +++L+ +M + LLTGST + I + L +
Sbjct: 316 DNGFQTTLVAPTEILATQHYNGIVELVKDM-----GLAVRLLTGSTKTSARKEIHQQLLS 370
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
G++ ++IGTH+++ +KV F L LAIVDEQ RFGV QR + K
Sbjct: 371 GELHILIGTHAVLEDKVSFKNLGLAIVDEQHRFGVAQRAKLWRK---------------- 414
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PH+L M+ATPIPRTLA++LYGD+ ++ I +LPPGR PI T
Sbjct: 415 ------NQIPPHILVMTATPIPRTLAMSLYGDLDISVIDELPPGRKPITT 458
>gi|395801518|ref|ZP_10480777.1| ATP-dependent DNA helicase RecG [Flavobacterium sp. F52]
gi|395436387|gb|EJG02322.1| ATP-dependent DNA helicase RecG [Flavobacterium sp. F52]
Length = 702
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 144/404 (35%), Positives = 217/404 (53%), Gaps = 54/404 (13%)
Query: 331 KSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKG 390
K I K+ E + + GK S + M I++L E + SLR+ +P +YPS
Sbjct: 104 KWIRESLKLNEPLVIFGKCSLYGS--QFSMAHPEIELL-SEHERSLRSAMQP--VYPSTE 158
Query: 391 GL-NASLLRDTIARALQAL----PANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
L N + TI + ++ L A F + P + +E L+ A IH PK +
Sbjct: 159 TLANKGISNRTINKLMEQLFLETQALFTETFPPFLIEELKLIPKRAALFNIHFPKSAEIL 218
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
A+ RL F+E F++QL + + L RK ++ + L +
Sbjct: 219 AKAQFRLKFEELFFIQLQLITKNL---------------IRKHKIKGHPFDKVGELFNEF 263
Query: 505 LRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
+ LP+ LT++Q I EI D+ MNRLLQGDVG GKT+VAF++ + I +G+QA
Sbjct: 264 YKNHLPFDLTNAQKRVIKEIRTDMGSNAQMNRLLQGDVGSGKTIVAFMSMLLAIDNGFQA 323
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
M PTE+LA QH+ L + + + I +LTGST + ++I +L++G++ ++
Sbjct: 324 CLMAPTEILANQHFLGLSEFAKTLNIN-----IRILTGSTKTSERKIIHDELESGELKIL 378
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
IGTH+L+ +KV+F L LA++DEQ RFGV QR SKL+ K+D
Sbjct: 379 IGTHALLEDKVQFQNLGLAVIDEQHRFGVEQR----SKLW----------------KKND 418
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PHVL M+ATPIPRTLA++LYGD+ ++ I +LPPGR PI+T
Sbjct: 419 --IPPHVLVMTATPIPRTLAMSLYGDLDISVIDELPPGRKPIQT 460
>gi|313205993|ref|YP_004045170.1| ATP-dependent DNA helicase recg [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|386322023|ref|YP_006018185.1| RecG-like helicase [Riemerella anatipestifer RA-GD]
gi|416112010|ref|ZP_11593034.1| ATP-dependent DNA helicase RecG [Riemerella anatipestifer RA-YM]
gi|442314819|ref|YP_007356122.1| RecG-like helicase [Riemerella anatipestifer RA-CH-2]
gi|312445309|gb|ADQ81664.1| ATP-dependent DNA helicase RecG [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|315022306|gb|EFT35334.1| ATP-dependent DNA helicase RecG [Riemerella anatipestifer RA-YM]
gi|325336566|gb|ADZ12840.1| RecG-like helicase [Riemerella anatipestifer RA-GD]
gi|441483742|gb|AGC40428.1| RecG-like helicase [Riemerella anatipestifer RA-CH-2]
Length = 696
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 130/357 (36%), Positives = 192/357 (53%), Gaps = 61/357 (17%)
Query: 384 PIYPS-----KGGLN----ASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMG 434
PIY K G+N +++R+ I +A L N +P I L+ +AY
Sbjct: 148 PIYSGSEKLIKRGVNNKFFQTIIREVIKQASFFLEEN---LPSNILSSLKLIGRREAYQN 204
Query: 435 IHQPKHIDEADLARKRLIFDEFFYLQLG----RLYQMLEGLGTQFEKEGLLDKYRKPRLN 490
IH P++I + A KRL F+E F+ QLG + YQ + +G F L+ Y N
Sbjct: 205 IHFPQNISWINEANKRLKFEEAFFFQLGYGLKKQYQKVSNVGIPFP---LVGDY----FN 257
Query: 491 AAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAF 550
Y LP+ LT++Q + EI D+K+P+ MNRLLQGDVG GKT+VA
Sbjct: 258 NFYQN-----------KLPFELTNAQKRVLKEIRNDMKKPIQMNRLLQGDVGSGKTMVAL 306
Query: 551 LACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRM 610
L+ + + +G QA M PTE+LA QHY +++LL+ +I LLTGST + +
Sbjct: 307 LSMLLALDNGTQACLMAPTEILAQQHYNSIVQLLEGT-----GIEIRLLTGSTKKSERKD 361
Query: 611 IRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSG 670
I + L++G +++++GTH+++ + V+F L L I+DEQ RFGV QR + SK
Sbjct: 362 IHEGLESGRLSILVGTHAILEDAVKFKNLGLGIIDEQHRFGVAQRAKLWSK--------- 412
Query: 671 MAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PH+L M+ATPIPRTLA++ Y D+ ++ I +LP GR PI T
Sbjct: 413 -------------NKIPPHILIMTATPIPRTLAMSFYSDLDVSVIDELPTGRKPIIT 456
>gi|419781877|ref|ZP_14307691.1| ATP-dependent DNA helicase RecG [Streptococcus oralis SK610]
gi|383183935|gb|EIC76467.1| ATP-dependent DNA helicase RecG [Streptococcus oralis SK610]
Length = 671
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 162/533 (30%), Positives = 255/533 (47%), Gaps = 101/533 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ DL+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLDLEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWS 498
+ E A +R+ F+E FY Q+ L+ L ++ + GL+ + + ++ A
Sbjct: 197 LAEYKQALRRIKFEELFYFQM-----QLQTLKSENRVQGSGLVLNWSQEKVTAVK----- 246
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA +
Sbjct: 247 -------ENLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVT 299
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+GYQAA MVPTE+LA QH+E L L ++ K+ALLTGS V + R + + + G
Sbjct: 300 AGYQAALMVPTEILAEQHFESLQNLFPDL-------KLALLTGSLKVAEKREVLETIAKG 352
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+ L+IGTH+LI + V+++ L L I+DEQ RFGV QR K D
Sbjct: 353 EADLIIGTHALIQDGVDYARLGLIIIDEQHRFGVGQRRILREK--------------GDN 398
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 ---------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|379726851|ref|YP_005319036.1| ATP-dependent DNA helicase RecG [Melissococcus plutonius DAT561]
gi|376317754|dbj|BAL61541.1| ATP-dependent DNA helicase RecG [Melissococcus plutonius DAT561]
Length = 679
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 165/532 (31%), Positives = 243/532 (45%), Gaps = 103/532 (19%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQY------F 260
L I+ +P + + L+ G YT+ LL ++P Y D+Q ++D Q F
Sbjct: 3 LSDVITKIPKIGSKRAENLQALGIYTVEDLLTYYPFRYEDIQEKELDEIQDQEKVTLKGF 62
Query: 261 IFIGEIISSRGMKAG-CSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFF 319
+ I++ G K F ++ V+N+ FF
Sbjct: 63 VVSEPIVTHYGYKKNRLVFRIMQ--------------EHAVINVS-------------FF 95
Query: 320 RGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAK 379
+ FLK K + E + + GK A R + + I +L +D K
Sbjct: 96 NQS------FLKE---KVHLSEEIAIYGKWDAKRKSLN------GIKILASKD-----GK 135
Query: 380 GRPY-PIYPSKGGLNASLLRDTIARALQAL-PANFDPVPKEITQEFGLLCLFDAYMGIHQ 437
+ PIY ++ S L I A A + +P + +++ LL +A +H
Sbjct: 136 TEDFSPIYHVNKKIHQSTLVQLIQTAFDLYGEAIEETLPNYLLKKYHLLSRKEAMFSMHF 195
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYME 495
P E A++R++F+EF QL ++GL Q E+ G+ Y RL
Sbjct: 196 PNLPSENYQAKRRIVFEEFLIFQL-----QIQGLKKQEKAEQNGISIHYDIKRL------ 244
Query: 496 GWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
K+ ++LP+ LT +Q +EI DL M RLLQGDVG GKT+VA +
Sbjct: 245 ------KQFTKSLPFQLTEAQKKVTNEICRDLLSANHMQRLLQGDVGSGKTIVAAIVLYA 298
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
V+ +G+Q A MVPTE+LA QH E KL + +E +IALLT ST +K+ R I + L
Sbjct: 299 VVTAGFQGALMVPTEILAQQHMESFQKLYNPLE-----VRIALLTSSTKLKERREILEQL 353
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
+ G I ++IGTH+LI E V F L L I DEQ RFGV QR K
Sbjct: 354 RNGAIDIIIGTHALIQEDVVFHQLGLVITDEQHRFGVNQRKILREK-------------- 399
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
M P VL M+ATPIPRTLA+ +G+M ++ I ++P GR P++T
Sbjct: 400 ---------GMRPDVLFMTATPIPRTLAITAFGEMDVSSIDEMPAGRQPVET 442
>gi|421307888|ref|ZP_15758530.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA60132]
gi|395907273|gb|EJH18167.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA60132]
Length = 665
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 162/528 (30%), Positives = 252/528 (47%), Gaps = 99/528 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIISS 269
+ +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G++++
Sbjct: 1 MHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQVVTP 60
Query: 270 RGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTRFTSI 327
++ + F ++ ++ LK+ F +
Sbjct: 61 ASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVNFFNQ 91
Query: 328 PFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
P+L K ++G + V GK RA S ++ + + EDDL P+Y
Sbjct: 92 PYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ--------PVY 134
Query: 387 PSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
G++ + L I A Q L + +P+ + ++ L+ A +H PK + E
Sbjct: 135 RLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKDLAEY 194
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
A +R+ F+E FY Q+ L+ L ++ +G + + WS
Sbjct: 195 KQALRRIKFEELFYFQM-----QLQTLKSENRVQG-----------SGLVLDWSQEKVTA 238
Query: 505 LRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
++A LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +GYQA
Sbjct: 239 VKASLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTAGYQA 298
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+ L+
Sbjct: 299 ALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGEADLI 351
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 352 IGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN----- 392
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 393 ----PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 436
>gi|90961599|ref|YP_535515.1| ATP-dependent DNA helicase [Lactobacillus salivarius UCC118]
gi|90820793|gb|ABD99432.1| ATP-dependent DNA helicase [Lactobacillus salivarius UCC118]
Length = 676
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 132/361 (36%), Positives = 192/361 (53%), Gaps = 49/361 (13%)
Query: 385 IYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
+Y S + S+++ + +A + D VP+ I ++ L IH P E
Sbjct: 139 VYRSSKDIKESIIKQLVKQAYDEYNSYIKDVVPESIRIKYRLENRKQMIHDIHFPSTKKE 198
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
ADLAR+ IFDEFF + G Q+L+ + GL KY +L K+
Sbjct: 199 ADLARRSAIFDEFFSFEAG--LQLLKR--DNHKNMGLRIKYNNEKL------------KE 242
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
++ LP+ LT +Q ++EI D+ P MNRLLQGDVG GKT++A +A + +G+QA
Sbjct: 243 FIKGLPFELTKAQKRVVNEICADMLSPNHMNRLLQGDVGSGKTIIAAIAMYATVTAGFQA 302
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGS--TPVKQSRMIRKDLQTGDIT 621
M PTE+LA QH E L L +++ +AL+T S + VK R + K L+ GDI
Sbjct: 303 VLMAPTEILAQQHAEKLANLF-----EQYGISVALMTSSSLSRVKVKRELLKHLKNGDID 357
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+VIGTH++I + +EF L LAI DEQ RFGV QR K
Sbjct: 358 IVIGTHAVIQDNIEFHNLGLAITDEQHRFGVNQRRILRKK-------------------- 397
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVY 741
+ P +LAM+ATPIPRTLA+ YG+M ++ I +LP GR P+KT ++ +K +NV+
Sbjct: 398 ---GVNPEILAMTATPIPRTLAITTYGEMDVSIIDELPKGRQPVKTSWVK--KKQVKNVF 452
Query: 742 K 742
+
Sbjct: 453 E 453
>gi|410456975|ref|ZP_11310822.1| ATP-dependent DNA helicase RecG [Bacillus bataviensis LMG 21833]
gi|409926949|gb|EKN64100.1| ATP-dependent DNA helicase RecG [Bacillus bataviensis LMG 21833]
Length = 682
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 161/529 (30%), Positives = 245/529 (46%), Gaps = 95/529 (17%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L+ ++ + G+ + L +T++ LL +FP Y D + DL + Q+ E
Sbjct: 5 LNHSVTALKGIGEETAEALAEMKIFTVQDLLEYFPYRYEDY--SLKDLTEVQH----DEK 58
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
++ G D + +K K+ L L F G+
Sbjct: 59 VTVEG----------------------KVHSDPSLTYYGRKKSKLMLRL---FVGSYLIK 93
Query: 327 IPFLKS--IEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY- 383
+ F ++ K + E + V+GK A R + +E AK + +
Sbjct: 94 VVFFNQPYLKNKININETITVTGKWDAHRQT-----------ISANEMQTGTNAKTKDFE 142
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFD-PVPKEITQEFGLLCLFDAYMGIHQPKHID 442
P+Y KG + +R I A Q + +P Q++ LL ++A +H P +
Sbjct: 143 PVYSLKGKITTKGMRKFIHLAFQQYGQFIEETLPVTFIQKYRLLNRYEAIKTMHFPISPE 202
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKE---GLLDKYRKPRLNAAYMEGWSS 499
E AR+R +++EF QL ++ L +FE+E G++ KY L
Sbjct: 203 EVKQARRRFVYEEFLLFQLK-----MQAL-RKFEREHSPGIIQKYDLANL---------- 246
Query: 500 LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
K+ + +LP+ LT++Q ++E++ +LK P MNRLLQGDVG GKTVVA + + +
Sbjct: 247 --KEFIDSLPFPLTNAQKRVVNEVLAELKSPYRMNRLLQGDVGSGKTVVAAIGLYASVTA 304
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
G+Q A MVPTE+LA QH E L LL+ K LLT S K+ R I +DL G
Sbjct: 305 GFQGALMVPTEILAEQHAESLKGLLEPF-----NVKCELLTSSIKGKRRREILQDLADGM 359
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
+ ++IGTH+LI E+V F L I DEQ RFGV QR K G
Sbjct: 360 VDILIGTHALIQEEVMFKKLGFVITDEQHRFGVEQRRVLREK----------------GE 403
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTY 728
P VL M+ATPIPRTLA+ ++G+M ++ I ++P GR I+TY
Sbjct: 404 -------NPDVLFMTATPIPRTLAITVFGEMDVSIIDEMPAGRKSIETY 445
>gi|320449878|ref|YP_004201974.1| ATP-dependent DNA helicase RecG [Thermus scotoductus SA-01]
gi|320150047|gb|ADW21425.1| ATP-dependent DNA helicase RecG [Thermus scotoductus SA-01]
Length = 775
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 178/544 (32%), Positives = 263/544 (48%), Gaps = 93/544 (17%)
Query: 192 SEVGSLPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ 251
++ SLPS + D VP S++ +L +T+R LLH++PR Y D +
Sbjct: 85 AQAASLPSPSRRLTPQDPAHLLVPPQSRK---KLAELSLHTVRDLLHYYPRRYEDRRTL- 140
Query: 252 IDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKI 311
G F+ G KA S ++ E+ T G ++V + +
Sbjct: 141 ----PGVRFL-------EDGQKATLSVK----VLSKELVKT-PKKGMQLVQVRAQDAW-- 182
Query: 312 YLHLKKFFRGTRFTSIPFLKS-IEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKD 370
G R T + F ++ + + + GE + V+G+V+ Y ++ ++
Sbjct: 183 ---------GFRITLVWFNQTWVLSQIQEGETLIVTGRVQRRNGVQLY------VEHFEN 227
Query: 371 EDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQ-ALPANFDPVPKEITQEFGLLCLF 429
E SL + GR PIYP+K G+ + LR T RAL+ ALP DP+ + +E LL
Sbjct: 228 EGTESL-STGRIVPIYPAKEGIGQAFLRRTAHRALETALPLP-DPL-EPYREEHRLLPYS 284
Query: 430 DAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEG---LGTQFEKEGLLDKYRK 486
+A IH P+ + A RL FDE+ L+L L G LG F+ E
Sbjct: 285 EALRQIHFPEDEEALKKALLRLKFDEYVLLELKALLDA--GGLVLGRSFKVE-------- 334
Query: 487 PRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKT 546
E W+ KK LP+ LT +Q ++EI D++ P M RLLQGDVG GKT
Sbjct: 335 --------ETWTETFKK---TLPFPLTRAQERVMAEIAQDMQSPRQMARLLQGDVGSGKT 383
Query: 547 VVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVK 606
VVA A +G Q A M PTE+LA QHY++L + L + ++ LL GS K
Sbjct: 384 VVAAYALYLAALNGAQGALMAPTEILAKQHYQNLSRYLFPL-----GVRVELLLGSMTPK 438
Query: 607 QSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTS 666
+ + + L +G+ + +GTH+LI E V F L LA+VDE+ RFGV+QR
Sbjct: 439 EREGVIERLLSGEAQVAVGTHALIQEGVGFKDLGLAVVDEEHRFGVLQR----------- 487
Query: 667 MSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIK 726
A++ P P VL MSATPIPR+LAL LYGD+ ++ + ++PPGR P+K
Sbjct: 488 ----RALLKLAKVP-------PDVLVMSATPIPRSLALTLYGDLEVSILDEMPPGRKPVK 536
Query: 727 TYII 730
T ++
Sbjct: 537 TKVL 540
>gi|148380449|ref|YP_001254990.1| ATP-dependent DNA helicase RecG [Clostridium botulinum A str. ATCC
3502]
gi|153931726|ref|YP_001384672.1| ATP-dependent DNA helicase RecG [Clostridium botulinum A str. ATCC
19397]
gi|153935165|ref|YP_001388193.1| ATP-dependent DNA helicase RecG [Clostridium botulinum A str. Hall]
gi|148289933|emb|CAL84046.1| putative ATP-dependent DNA helicase [Clostridium botulinum A str.
ATCC 3502]
gi|152927770|gb|ABS33270.1| ATP-dependent DNA helicase RecG [Clostridium botulinum A str. ATCC
19397]
gi|152931079|gb|ABS36578.1| ATP-dependent DNA helicase RecG [Clostridium botulinum A str. Hall]
Length = 679
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 163/530 (30%), Positives = 252/530 (47%), Gaps = 100/530 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
I+ + G+ + QLE C + + LL +FPR Y + N D +++S +
Sbjct: 7 ITTLKGVGPKTKEQLEKCMIFNIMDLLLYFPRDYEFIDNYSKD-----------KLLSKK 55
Query: 271 GMKAGCSFSFLEVIVGCEIA----DTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
VI+ ++ D T +G + I I+ +K G+ F
Sbjct: 56 ------------VIIKVQVENIKRDIRTRTGKILTTI-------IFNDGEKAIVGSWFNQ 96
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
P++K+ K+GE + G ++ R N + N +LK++ + + + P Y
Sbjct: 97 -PYIKNY---FKIGEEYVLQGSLKEYRGN----LTINNAQILKNKCGEEVEER-KIIPKY 147
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL 446
P KG L +LL + L + + +P + +++ L L + IH+P++ E +
Sbjct: 148 PLKGDLKNNLLIKLVDSVLTNIDIG-ENLPIWLIEKYKFLSLDKSIRTIHKPENQKELEE 206
Query: 447 ARKRLIFDEF--FYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK- 503
+ +RL F E + L++ L + LE EG S + +
Sbjct: 207 SIRRLKFQELLAYCLKIAFLKEYLE----------------------TATEGISFIVSEE 244
Query: 504 ---LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
L+ LP+ LT++Q + EI D ++ PMNRLLQGDVG GKT++A ++ VI +G
Sbjct: 245 INNLIEVLPFKLTNAQNKVLQEIFKDQEKEKPMNRLLQGDVGSGKTIIALISLFNVIKNG 304
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQ + PTE+LA QHYE LKL + + I LL GS V + I++ L+ G I
Sbjct: 305 YQGVMLAPTEILAVQHYEEALKLFKDFNLN-----IELLIGSIKVSSKKEIKEKLKEGKI 359
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
L+IGTH+LI + VEF L + I DEQ RFGV+QR + M+N S
Sbjct: 360 DLIIGTHALIEDDVEFYNLGMVITDEQHRFGVMQRSK---------------MLNKGKS- 403
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
L MSATPIPR+L L+LYGD+ L+ I +LPPGR I TY +
Sbjct: 404 -------VDTLVMSATPIPRSLTLSLYGDLDLSIIDELPPGRQKIDTYYV 446
>gi|354582488|ref|ZP_09001390.1| ATP-dependent DNA helicase RecG [Paenibacillus lactis 154]
gi|353199887|gb|EHB65349.1| ATP-dependent DNA helicase RecG [Paenibacillus lactis 154]
Length = 683
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 155/527 (29%), Positives = 240/527 (45%), Gaps = 90/527 (17%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIIS 268
+ + G+S +L G YT++ LL ++P Y D + + ++ DG ++ S
Sbjct: 9 SVRQINGVSALKEGELHAFGVYTVKDLLEYYPFRYEDYRLRSLSEVKDGDKITIQAKVAS 68
Query: 269 SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIP 328
V + +K L K FT+
Sbjct: 69 --------------------------------VPVLQRYGRKSRLTCKMLAESWMFTATW 96
Query: 329 FLKS-IEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDE--DDLSLRAKGRPYPI 385
F + ++ + G + ++GK ++ R + V + E D + R+ G P+
Sbjct: 97 FNRHFLKDQLTAGREIVLTGK---------WDQRRMQLTVSESEFPDKGAFRS-GTLQPV 146
Query: 386 YPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
Y G + S +R T+ +AL+ + +PK + Q++ L+ A M IHQP E
Sbjct: 147 YSIGGKITQSWIRKTMGQALEQYGEMIPEILPKSLLQKYDLMPRKRAIMTIHQPVDSREG 206
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
R+R++++E F QL Q L + R++ ++ ++
Sbjct: 207 QEGRRRMVYEELFLFQLK--MQAFRALN-------------RGRMDGVVHTADNATIREF 251
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
+R+LP+ LT +Q EI+ D++ P MNRLLQGDVG GKTVVA +A + SG+Q A
Sbjct: 252 VRSLPFELTDAQKKVELEILHDMRSPYCMNRLLQGDVGSGKTVVAAIALYTTVRSGFQGA 311
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
MVPTE+LA QH L KL + + LLTGS K+ + + LQ G +V+
Sbjct: 312 LMVPTEILAEQHMRSLQKLFEPF-----GITVGLLTGSVTGKKRKDLLASLQMGLTDVVV 366
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+LI + V F L L + DEQ RFGV QR K Y
Sbjct: 367 GTHALIQDDVFFRQLGLVVTDEQHRFGVNQRSILRRKGY--------------------- 405
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ +++ P GRIPI TY ++
Sbjct: 406 --NPDVLTMTATPIPRTLAITAFGDMDVSTLSERPKGRIPITTYWVK 450
>gi|71905998|ref|YP_283585.1| ATP-dependent DNA helicase RecG [Dechloromonas aromatica RCB]
gi|71845619|gb|AAZ45115.1| ATP-dependent DNA helicase RecG [Dechloromonas aromatica RCB]
Length = 683
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 143/360 (39%), Positives = 188/360 (52%), Gaps = 55/360 (15%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
PIYPS GL S L+ I +AL A+ D +P+ + Q L L + +H+P +
Sbjct: 147 PIYPSTAGLANSALQKLIGKAL-AVGDLSDTLPETLRQRLKLPGLARSLNFLHRPPPGTD 205
Query: 444 ADL-------ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAA-YME 495
D A +R+ FDE QL L Y R A +
Sbjct: 206 LDTLHARNHPAWRRVKFDEVLAQQLS-----------------LRRAYLARREQGAPVLV 248
Query: 496 GWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
L +LL LP+ LT +QL A++EI DL QP PM RLLQGDVG GKT+VA LA +
Sbjct: 249 AQDDLGARLLDQLPFGLTGAQLRAMAEIADDLAQPYPMQRLLQGDVGAGKTIVAALAACQ 308
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
I +G+QAAFM PTE+LA QHY LKL D +E K+A L+GS K R +
Sbjct: 309 AISAGWQAAFMAPTEILAEQHY---LKLKDWLE--PLGVKVAWLSGSLKTKAKRE-QLAA 362
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
+ LV+GTH+LI + V+F+ L LAIVDEQ RFGV QR +A+
Sbjct: 363 TAAEAQLVVGTHALIQDGVDFARLGLAIVDEQHRFGVAQR---------------LALRK 407
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
+ PH L MSATPIPRTLA++ Y D+ +T + +LPPGR PIKT ++ N +
Sbjct: 408 KGNN--------PHQLMMSATPIPRTLAMSYYADLDVTVLDELPPGRTPIKTRLVADNRR 459
>gi|332685789|ref|YP_004455563.1| ATP-dependent DNA helicase RecG [Melissococcus plutonius ATCC
35311]
gi|332369798|dbj|BAK20754.1| ATP-dependent DNA helicase RecG [Melissococcus plutonius ATCC
35311]
Length = 679
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 164/532 (30%), Positives = 242/532 (45%), Gaps = 103/532 (19%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQY------F 260
L I+ +P + + L+ G YT+ LL ++P Y D+Q ++D Q F
Sbjct: 3 LSDVITKIPKIGSKRAENLQALGIYTVEDLLTYYPFRYEDIQEKELDEIQDQEKVTLKGF 62
Query: 261 IFIGEIISSRGMKAG-CSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFF 319
+ I++ G K F ++ V+N+
Sbjct: 63 VVSEPIVTHYGYKKNRLVFRIMQ--------------EHAVINVS--------------- 93
Query: 320 RGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAK 379
F + FLK K + E + + GK A R + + I +L +D K
Sbjct: 94 ----FFNQSFLKE---KVHLSEEIAIYGKWDAKRKSLN------GIKILASKD-----GK 135
Query: 380 GRPY-PIYPSKGGLNASLLRDTIARALQAL-PANFDPVPKEITQEFGLLCLFDAYMGIHQ 437
+ PIY ++ S L I A A + +P + +++ LL +A +H
Sbjct: 136 TEDFSPIYHVNKKIHQSTLVQLIQTAFDLYGEAIEETLPNYLLKKYHLLSRKEAMFSMHF 195
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYME 495
P E A++R++F+EF QL ++GL Q E+ G+ Y RL
Sbjct: 196 PNLPSENYQAKRRIVFEEFLIFQL-----QIQGLKKQEKAEQNGISIHYDIKRL------ 244
Query: 496 GWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
K+ ++LP+ LT +Q +EI DL M RLLQGDVG GKT+VA +
Sbjct: 245 ------KQFTKSLPFQLTEAQKKVTNEICRDLLSANHMQRLLQGDVGSGKTIVAAIVLYA 298
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
V+ +G+Q A MVPTE+LA QH E KL + +E +IALLT ST +K+ R I + L
Sbjct: 299 VVTAGFQGALMVPTEILAQQHMESFQKLYNPLE-----VRIALLTSSTKLKERREILEQL 353
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
+ G I ++IGTH+LI E V F L L I DEQ RFGV QR K
Sbjct: 354 RNGAIDIIIGTHALIQEDVVFHQLGLVITDEQHRFGVNQRKILREK-------------- 399
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
M P VL M+ATPIPRTLA+ +G+M ++ I ++P GR P++T
Sbjct: 400 ---------GMRPDVLFMTATPIPRTLAITAFGEMDVSSIDEMPAGRQPVET 442
>gi|373857282|ref|ZP_09600024.1| ATP-dependent DNA helicase RecG [Bacillus sp. 1NLA3E]
gi|372452932|gb|EHP26401.1| ATP-dependent DNA helicase RecG [Bacillus sp. 1NLA3E]
Length = 682
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 159/527 (30%), Positives = 239/527 (45%), Gaps = 91/527 (17%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L + +S + G+ + L YT++ LL HFP + D + DL D
Sbjct: 5 LKEPVSVIKGIGEETAEMLAGMNIYTVQDLLEHFPYRFED--HRLRDLAD---------- 52
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKK---IYLHLKKFFRGTR 323
++ E E E + G+KK + L + ++
Sbjct: 53 -----------------VLHDERVTVEGKVHSEPSLVYYGRKKSRLTVRLLVDRYLVQVI 95
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY 383
F + PFLK+ K + + + V+GK R + +E ++G+
Sbjct: 96 FFNQPFLKN---KISLNQIITVTGKWDQHRQT-----------ITANEMKTGSFSQGQEI 141
Query: 384 -PIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
P+Y KG L +R I A + + +P+ I + LL DA +H P
Sbjct: 142 EPVYAVKGRLTVKGMRKFIKVAFAQYAHSLQETLPESIMNRYKLLKRRDALRALHFPLSQ 201
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
++ AR+R +++EF QL K L KY + + ++ +
Sbjct: 202 NDVKQARRRFVYEEFLLFQL---------------KMQALRKYEREQSAGVALQFDEHIV 246
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
++ + LP+ LT++Q + EI+ DLK P MNRLLQGDVG GKTVVA + +G+
Sbjct: 247 QQFIEGLPFPLTNAQNRVVDEILADLKSPYRMNRLLQGDVGSGKTVVAAIGLYASFIAGF 306
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q A MVPTE+LA QH E L LL+ + K LLT S K+ R I + L G+I
Sbjct: 307 QGALMVPTEILAEQHVESLKILLEPV-----GVKCELLTSSVKGKRRREILQQLSMGEIH 361
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
++IGTH+LI E+V+F L I DEQ RFGV QR K G+P
Sbjct: 362 VLIGTHALIQEEVQFQKLGFVITDEQHRFGVEQRRILREK---------------GGNPD 406
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTY 728
VL M+ATPIPRTLA+ ++G+M ++ I ++P GR I+TY
Sbjct: 407 --------VLFMTATPIPRTLAITVFGEMDVSVIDEMPAGRKAIETY 445
>gi|293368690|ref|ZP_06615296.1| ATP-dependent DNA helicase RecG [Bacteroides ovatus SD CMC 3f]
gi|292636231|gb|EFF54717.1| ATP-dependent DNA helicase RecG [Bacteroides ovatus SD CMC 3f]
Length = 698
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 172/532 (32%), Positives = 257/532 (48%), Gaps = 97/532 (18%)
Query: 209 KCISCV-PGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEII 267
K IS V P + L +LE Y+L L+++FP Y D +I EI
Sbjct: 10 KFISGVGPQKAAVLNKELE---IYSLHDLIYYFPYKYIDRSR----------IYYIHEI- 55
Query: 268 SSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSI 327
+ ++++ EI ET I G+++++ H F GT +
Sbjct: 56 -------DGNMPYIQL--KGEILGFET--------IGEGRQRRLTAH---FSDGTGVVDL 95
Query: 328 PFLKSIE---GKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG-RPY 383
+ + I+ GK+K+ E + GK N + ++D +DL L + G +PY
Sbjct: 96 VWFQGIKYILGKYKLHEEYIIFGKPTVF--NGRINVAHPDVD---KPEDLKLSSVGLQPY 150
Query: 384 PIYPSK---GGLNASLLRDTIARALQALPANFDPVPKEITQ----EFGLLCLFDAYMGIH 436
K LN+ + +A +Q + +P+P+ ++ E L+ L +A IH
Sbjct: 151 YNTTEKMKRSFLNSHAIEKMMATVIQQIQ---EPLPETLSSKLLAEHHLMPLTEALRNIH 207
Query: 437 QPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG 496
P + D A+ RL F+E FY+QL L ++ K+ R+ R E
Sbjct: 208 FPTNPDVLRRAQYRLKFEELFYVQLNIL---------RYAKD------RQKRYRGYIFEK 252
Query: 497 WSSLTKKLL-RALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACME 555
+ + LP+ LT +Q + EI D+ MNRLLQGDVG GKT+VA ++ +
Sbjct: 253 VGDVFNTFYTKNLPFQLTGAQKRVLKEIRNDVGSGRQMNRLLQGDVGSGKTLVALMSMLL 312
Query: 556 VIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
+ +GYQA M PTE+LA QHYE + +LL M+ ++ LLTGS K+ I L
Sbjct: 313 ALDNGYQACMMAPTEILANQHYETIKELLFGMD-----IRVELLTGSIKGKRREAILTGL 367
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
TGD+ ++IGTH++I + V FS+L ++DEQ RFGV QR R SK
Sbjct: 368 LTGDVKILIGTHAVIEDTVNFSSLGFVVIDEQHRFGVAQRARLWSK-------------- 413
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ P PHVL M+ATPIPRTLA+ LYGD+ ++ I +LPPGR PI T
Sbjct: 414 -NVQP-------PHVLVMTATPIPRTLAMTLYGDLDVSIIDELPPGRKPITT 457
>gi|170756283|ref|YP_001782038.1| ATP-dependent DNA helicase RecG [Clostridium botulinum B1 str.
Okra]
gi|429246595|ref|ZP_19209912.1| ATP-dependent DNA helicase RecG [Clostridium botulinum CFSAN001628]
gi|169121495|gb|ACA45331.1| ATP-dependent DNA helicase RecG [Clostridium botulinum B1 str.
Okra]
gi|428756388|gb|EKX78943.1| ATP-dependent DNA helicase RecG [Clostridium botulinum CFSAN001628]
Length = 679
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 163/530 (30%), Positives = 252/530 (47%), Gaps = 100/530 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
I+ + G+ + QLE C + + LL +FPR Y + N D +++S +
Sbjct: 7 ITTLKGVGPKTKEQLEKCMIFNIMDLLLYFPRDYEFIDNYSKD-----------KLLSKK 55
Query: 271 GMKAGCSFSFLEVIVGCEIA----DTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
VI+ ++ D T +G + I I+ +K G+ F
Sbjct: 56 ------------VIIKVQVENIKRDIRTRTGKILTTI-------IFNDGEKAIVGSWFNQ 96
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
P++K+ K+GE + G ++ R N + N +LK++ + + + P Y
Sbjct: 97 -PYIKNY---FKIGEEYVLQGSLKEYRGN----LTINNAQILKNKCAEEVEER-KIIPKY 147
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL 446
P KG L +LL + L + + +P + +++ L L + IH+P++ E +
Sbjct: 148 PLKGDLKNNLLIKLVDSVLTNIDIG-ENLPIWLIEKYKFLSLDKSIRTIHKPENQKELEE 206
Query: 447 ARKRLIFDEF--FYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK- 503
+ +RL F E + L++ L + LE EG S + +
Sbjct: 207 SIRRLKFQELLAYCLKIAFLKEYLE----------------------TATEGISFIVSEE 244
Query: 504 ---LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
L+ LP+ LT++Q + EI D ++ PMNRLLQGDVG GKT++A ++ VI +G
Sbjct: 245 INNLIEVLPFKLTNAQNKVLQEIFKDQEKEKPMNRLLQGDVGSGKTIIALISLFNVIKNG 304
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQ + PTE+LA QHYE LKL + + I LL GS V + I++ L+ G I
Sbjct: 305 YQGVMLAPTEILAVQHYEEALKLFKDFNLN-----IELLIGSIKVSSKKEIKEKLKEGKI 359
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
L+IGTH+LI + VEF L + I DEQ RFGV+QR + M+N S
Sbjct: 360 DLIIGTHALIEDDVEFYNLGMVITDEQHRFGVMQRSK---------------MLNKGKS- 403
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
L MSATPIPR+L L+LYGD+ L+ I +LPPGR I TY +
Sbjct: 404 -------VDTLVMSATPIPRSLTLSLYGDLDLSIIDELPPGRQKIDTYYV 446
>gi|421292568|ref|ZP_15743302.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA56348]
gi|395891875|gb|EJH02869.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA56348]
Length = 665
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 162/528 (30%), Positives = 252/528 (47%), Gaps = 99/528 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIISS 269
+ +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G++++
Sbjct: 1 MHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQVVTP 60
Query: 270 RGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTRFTSI 327
++ + F ++ ++ LK+ F +
Sbjct: 61 ASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVNFFNQ 91
Query: 328 PFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
P+L K ++G + V GK RA S ++ + + EDDL P+Y
Sbjct: 92 PYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ--------PVY 134
Query: 387 PSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
G++ + L I A Q L + +P+ + ++ L+ A +H PK + E
Sbjct: 135 RLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKDLAEY 194
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
A +R+ F+E FY Q+ L+ L ++ +G + + WS
Sbjct: 195 KQALRRIKFEELFYFQM-----QLQTLKSENRVQG-----------SGLVLDWSQEKVTA 238
Query: 505 LRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
++A LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +GYQA
Sbjct: 239 VKASLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTAGYQA 298
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+ L+
Sbjct: 299 ALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGEADLI 351
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 352 IGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN----- 392
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 393 ----PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 436
>gi|399033897|ref|ZP_10732378.1| ATP-dependent DNA helicase RecG [Flavobacterium sp. CF136]
gi|398067729|gb|EJL59208.1| ATP-dependent DNA helicase RecG [Flavobacterium sp. CF136]
Length = 702
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 146/407 (35%), Positives = 211/407 (51%), Gaps = 60/407 (14%)
Query: 331 KSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKG 390
K I K+ E + GK S + M I++L E + SLR+ +P +YPS
Sbjct: 104 KWIRESLKLNEVCVIFGKCSLYGS--QFSMAHPEIELL-SEHEKSLRSAMQP--VYPSTE 158
Query: 391 GL-NASLLRDTIARALQAL----PANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
L N + TI + ++ L A F + P + +E L+ A IH PK D
Sbjct: 159 TLTNRGISNRTINKLMEQLFIETQALFTETFPSYLIEELKLISKKAALFNIHFPKSADAL 218
Query: 445 DLARKRLIFDEFFYLQLGRLYQML----EGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
A+ RL F+E F++QL + + L + G F K G N Y
Sbjct: 219 AKAQFRLKFEELFFIQLQLITKNLIRKHKIKGHPFTKVG-------EYFNEFYQN----- 266
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
LP+ LT++Q + EI D+ MNRLLQGDVG GKT+VAF++ + I +G
Sbjct: 267 ------HLPFELTNAQKRVVKEIRSDMGSNAQMNRLLQGDVGSGKTIVAFMSMLLAIDNG 320
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
+QA M PTE+LA QH+ L +L + + I +LTGST ++I ++L+ G +
Sbjct: 321 FQACLMAPTEILANQHFIGLSELAKTLNIN-----IKILTGSTKTSARKIIHEELENGSL 375
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
++IGTH+L+ +KV+F L LA++DEQ RFGV QR SKL+
Sbjct: 376 HILIGTHALLEDKVKFQNLGLAVIDEQHRFGVEQR----SKLW----------------- 414
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PHVL M+ATPIPRTLA++LYGD+ ++ I +LPPGR PI+T
Sbjct: 415 -KKNEIPPHVLVMTATPIPRTLAMSLYGDLDISVIDELPPGRKPIQT 460
>gi|421310096|ref|ZP_15760721.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA62681]
gi|395909711|gb|EJH20586.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA62681]
Length = 662
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 161/526 (30%), Positives = 253/526 (48%), Gaps = 101/526 (19%)
Query: 214 VPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIISSRGM 272
+PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G++++ +
Sbjct: 1 MPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQVVTPASV 60
Query: 273 KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTRFTSIPFL 330
+ + F ++ ++ LK+ F + P+L
Sbjct: 61 Q---YYGF--------------------------KRNRLRFSLKQGEVVFAVNFFNQPYL 91
Query: 331 KSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSK 389
K ++G + V GK RA S ++ + + EDDL P+Y
Sbjct: 92 AD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ--------PVYRLA 134
Query: 390 GGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA 447
G++ + L I A Q L + +P+ + ++ L+ A +H PK + E A
Sbjct: 135 QGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKDLAEYKQA 194
Query: 448 RKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWSSLTKKLL 505
+R+ F+E FY Q+ L+ L ++ + GL+ + + ++ A +
Sbjct: 195 LRRIKFEELFYFQM-----QLQTLKSENRVQGSGLVLNWSQEKVTAVKV----------- 238
Query: 506 RALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAF 565
+LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +GYQAA
Sbjct: 239 -SLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTAGYQAAL 297
Query: 566 MVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIG 625
MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+ L+IG
Sbjct: 298 MVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGEADLIIG 350
Query: 626 THSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQH 685
TH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 351 THALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN------- 389
Query: 686 MAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 390 --PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 433
>gi|168180622|ref|ZP_02615286.1| ATP-dependent DNA helicase RecG [Clostridium botulinum NCTC 2916]
gi|421836111|ref|ZP_16270690.1| ATP-dependent DNA helicase RecG [Clostridium botulinum CFSAN001627]
gi|182668552|gb|EDT80531.1| ATP-dependent DNA helicase RecG [Clostridium botulinum NCTC 2916]
gi|409742095|gb|EKN41628.1| ATP-dependent DNA helicase RecG [Clostridium botulinum CFSAN001627]
Length = 679
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 163/530 (30%), Positives = 252/530 (47%), Gaps = 100/530 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
I+ + G+ + QLE C + + LL +FPR Y + N D +++S +
Sbjct: 7 ITTLKGVGPKTKEQLEKCMIFNIMDLLLYFPRDYEFIDNYSKD-----------KLLSKK 55
Query: 271 GMKAGCSFSFLEVIVGCEIA----DTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
VI+ ++ D T +G + I I+ +K G+ F
Sbjct: 56 ------------VIIKVQVENIKRDIRTRTGKILTTI-------IFNDGEKAIVGSWFNQ 96
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
P++K+ K+GE + G ++ R N + N +LK++ + + + P Y
Sbjct: 97 -PYIKNY---FKIGEEYVLQGSLKEYRGN----LTINNAQILKNKCAEEVEER-KIIPKY 147
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL 446
P KG L +LL + L + + +P + +++ L L + IH+P++ E +
Sbjct: 148 PLKGDLKNNLLIKLVDSVLTNIDIG-ENLPIWLIEKYKFLSLDKSIRTIHKPENQKELEE 206
Query: 447 ARKRLIFDEF--FYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK- 503
+ +RL F E + L++ L + LE EG S + +
Sbjct: 207 SIRRLKFQELLAYCLKIAFLKEYLE----------------------TATEGISFIVSEE 244
Query: 504 ---LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
L+ LP+ LT++Q + EI D ++ PMNRLLQGDVG GKT++A ++ VI +G
Sbjct: 245 INNLIEVLPFKLTNAQNKVLQEIFKDQEKEKPMNRLLQGDVGSGKTIIALISLFNVIKNG 304
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQ + PTE+LA QHYE LKL + + I LL GS V + I++ L+ G I
Sbjct: 305 YQGVMLAPTEILAVQHYEEALKLFKDFNLN-----IELLIGSIKVSSKKEIKEKLKEGKI 359
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
L+IGTH+LI + VEF L + I DEQ RFGV+QR + M+N S
Sbjct: 360 DLIIGTHALIEDDVEFYNLGMVITDEQHRFGVMQRSK---------------MLNKGKS- 403
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
L MSATPIPR+L L+LYGD+ L+ I +LPPGR I TY +
Sbjct: 404 -------VDTLVMSATPIPRSLTLSLYGDLDLSIIDELPPGRQKIDTYYV 446
>gi|88802792|ref|ZP_01118319.1| putative ATP-dependent DNA helicase [Polaribacter irgensii 23-P]
gi|88781650|gb|EAR12828.1| putative ATP-dependent DNA helicase [Polaribacter irgensii 23-P]
Length = 698
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/354 (35%), Positives = 189/354 (53%), Gaps = 55/354 (15%)
Query: 384 PIYPSKGGL-NASLLRDTIARALQALPANF-----DPVPKEITQEFGLLCLFDAYMGIHQ 437
P+Y + L NA + + +Q L F + + +EI ++F + +A + H
Sbjct: 148 PVYHTTERLVNAGISNKMMGNFIQRLLEQFYDSIQENLSQEILEDFKFMTKREALLNAHF 207
Query: 438 PKHIDEADLARKRLIFDEFFYLQL----GRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAY 493
PK + A RL F+E F++QL +L ++ G FEK G++ N Y
Sbjct: 208 PKSQEHLTKAENRLKFEELFFIQLQLLRKKLINKVKIKGVVFEKVGVI-------FNDFY 260
Query: 494 MEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLAC 553
LP+ LT++Q + E+ D+ MNRLLQGDVG GKT+VA LA
Sbjct: 261 KN-----------KLPFDLTNAQKRVLKEVRKDVASGAHMNRLLQGDVGSGKTIVAILAM 309
Query: 554 MEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRK 613
+ I +G+QA M PTE+LA QH+ + +L+ ME K+A+LTGS K+ R I
Sbjct: 310 LLAIDNGFQATIMAPTEILANQHFIAVSELVAGME-----LKVAILTGSVRTKRRREIHA 364
Query: 614 DLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAM 673
L+ G + ++IGTH+L+ +KV+F L +AI+DEQ RFGV QR + +K
Sbjct: 365 GLEDGTLNILIGTHALLEDKVQFKNLGIAIIDEQHRFGVKQRAKLWAK------------ 412
Query: 674 VNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PH+L M+ATPIPRTLA+++YGD+ ++ I +LPPGR +KT
Sbjct: 413 ----------NVLPPHILVMTATPIPRTLAMSVYGDLDISVIDELPPGRKEVKT 456
>gi|385261159|ref|ZP_10039290.1| ATP-dependent DNA helicase RecG [Streptococcus sp. SK140]
gi|385189244|gb|EIF36712.1| ATP-dependent DNA helicase RecG [Streptococcus sp. SK140]
Length = 671
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 160/531 (30%), Positives = 253/531 (47%), Gaps = 97/531 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKIGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGVSQAGLVKVIKTAFDQGLDLLIEENIPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ Q+L+ + GL+ + + +L A
Sbjct: 197 LAEYKQALRRIKFEELFYFQMQ--LQILKS-ENKIHGSGLVLNWSQEKLTAVK------- 246
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +G
Sbjct: 247 -----EKLPFALTKAQEKSLQEILTDMKSDQHMNRLLQGDVGSGKTVVAGLAMYAAVTAG 301
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQAA MVPTE+LA QH+E L L ++ K+ALLTGS + R + + + G+I
Sbjct: 302 YQAALMVPTEILAEQHFESLESLFPDL-------KLALLTGSLKAAEKRTVLETIAKGEI 354
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+++GTH+LI + VE++ L L I+DEQ RFGV QR K
Sbjct: 355 DVIVGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK------------------- 395
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 396 ----GENPDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|238927334|ref|ZP_04659094.1| DNA helicase RecG [Selenomonas flueggei ATCC 43531]
gi|238884616|gb|EEQ48254.1| DNA helicase RecG [Selenomonas flueggei ATCC 43531]
Length = 706
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 166/532 (31%), Positives = 248/532 (46%), Gaps = 87/532 (16%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFIG 264
L ++ V G+ R L G T+ LL +PR Y D +DL G +G
Sbjct: 21 LTDSVNAVRGVGVRKAALLARLGVRTVYDLLTFYPRAYEDQSRITRIMDLAAGTRATVLG 80
Query: 265 EI--ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGT 322
I ++ R + F+ L +VG +G + ++ + +
Sbjct: 81 MIQQVTERQTRR-RGFTVLTALVGD----------------GTGYAQAVWFNQR------ 117
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVR-AMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
FLK GK + G+ + ++GKV A VL + + G
Sbjct: 118 ------FLK---GKLRTGQRILLTGKVDYAYGGGGQMAFSPVTSFVLLGAQEDAAAHLG- 167
Query: 382 PYPIYPSKGGLNASLLR----DTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQ 437
PIY + GL LR D +A A + L + +P++I E+ L+ A+ IH
Sbjct: 168 ILPIYAATEGLTQKQLRQMTADVLAHAGEELT---ETLPEQIRAEYHLIGRSAAFSQIHF 224
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGW 497
PK +E AR+RL F+E + +Q G L + T ++EG+ R N A
Sbjct: 225 PKDTEELAAARRRLAFEELYLIQCGLLALKKQ---TAEDEEGIAH-----RANGA----- 271
Query: 498 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
L ++ ALP++LT Q +EI D++ P+PM RL+QGDVG GKT +A LA ++ +
Sbjct: 272 --LVARVRDALPFALTEDQEKVWAEISRDMEAPLPMRRLVQGDVGSGKTAIALLALVKTV 329
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
SG Q A M PTE+LA QHY+ L + L + ++ L+G K+ + L +
Sbjct: 330 ESGCQGALMAPTEILARQHYDGLREFLTPL-----GIRVGFLSGRLTKKEHAEVLSALAS 384
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
+ +VIGTH+LI E V F L L + DEQ RFGV QR K SG
Sbjct: 385 HESDVVIGTHALIQEGVAFDRLGLVVTDEQHRFGVAQRSALEKK-------SG------- 430
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYI 729
+ P VL M+ATPIPRT+ L +YGD+ +++I LPPGR PI+T++
Sbjct: 431 --------IVPDVLVMTATPIPRTMTLTVYGDLDVSRIEHLPPGRQPIRTFL 474
>gi|365157104|ref|ZP_09353385.1| ATP-dependent DNA helicase RecG [Bacillus smithii 7_3_47FAA]
gi|363625838|gb|EHL76849.1| ATP-dependent DNA helicase RecG [Bacillus smithii 7_3_47FAA]
Length = 724
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 164/543 (30%), Positives = 247/543 (45%), Gaps = 99/543 (18%)
Query: 195 GSLPSEASIEPLLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDL 254
G + ++ LL + + + G+ K H L Y+++ LL +FP Y D + DL
Sbjct: 35 GGRHRKITVNNLLSRDVGVLKGIGKETAHSLAEMNIYSIKDLLEYFPYRYEDYRLR--DL 92
Query: 255 DDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLH 314
D + E ++ G D V +K ++
Sbjct: 93 ADVPH----EERVTVEG----------------------KVHSDPSVMYYGRKKSRLTFK 126
Query: 315 L--KKFFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSN---NHYEMREYNIDVLK 369
L ++ F + PFLK K K+ + + V+GK R HY + Y
Sbjct: 127 LLVDRYLVTAVFFNQPFLKK---KIKLNDTITVTGKWDRHRQTITVQHYHLGPY------ 177
Query: 370 DEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCL 428
S R++ P +Y KG + +++L+ IA AL + +P + + L
Sbjct: 178 -----SYRSEFEP--VYSLKGNITSNMLKKFIATALNEYGDYIRENLPTAFLENYKLPGR 230
Query: 429 FDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKE---GLLDKYR 485
+A IH PK+ E AR+R +++EF Y QL ++ L +FE+E G Y
Sbjct: 231 REAIRAIHFPKNAQELKQARRRFVYEEFLYFQLK-----IQAL-RKFEREHSKGQEQHYD 284
Query: 486 KPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGK 545
+L ++ ++ LP+ LT++Q I+EI DLK P MNRLLQGDVG GK
Sbjct: 285 VKKL------------REFIQHLPFPLTNAQKRVINEICADLKSPYRMNRLLQGDVGSGK 332
Query: 546 TVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPV 605
TVVA + I +G Q A MVPTE+LA QH L +L + + + LL+ S
Sbjct: 333 TVVAAVCLYATITAGNQGALMVPTEILAEQHTSSLRELFEPFD-----VTVELLSSSVKG 387
Query: 606 KQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYT 665
K+ + + + L+ GDI +++GTH+LI E V F L I DEQ RFGV QR K
Sbjct: 388 KKRKQVLEQLENGDIDILVGTHALIQEDVNFKQLGTVITDEQHRFGVEQRRVLREK---- 443
Query: 666 SMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
P VL M+ATPIPRTLA+ +G+M ++ I ++P GR I
Sbjct: 444 -------------------GENPDVLFMTATPIPRTLAITAFGEMDVSVIDEMPKGRKAI 484
Query: 726 KTY 728
+TY
Sbjct: 485 ETY 487
>gi|168182572|ref|ZP_02617236.1| ATP-dependent DNA helicase RecG [Clostridium botulinum Bf]
gi|237795934|ref|YP_002863486.1| ATP-dependent DNA helicase RecG [Clostridium botulinum Ba4 str.
657]
gi|182674174|gb|EDT86135.1| ATP-dependent DNA helicase RecG [Clostridium botulinum Bf]
gi|229262431|gb|ACQ53464.1| ATP-dependent DNA helicase RecG [Clostridium botulinum Ba4 str.
657]
Length = 679
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 163/530 (30%), Positives = 252/530 (47%), Gaps = 100/530 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
I+ + G+ + QLE C + + LL +FPR Y + N D +++S +
Sbjct: 7 ITTLKGVGPKTKEQLEKCMIFNIMDLLLYFPRDYEFIDNYSKD-----------KLLSKK 55
Query: 271 GMKAGCSFSFLEVIVGCEIA----DTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
VI+ ++ D T +G + I I+ +K G+ F
Sbjct: 56 ------------VIIKVQVENIKRDIRTRTGKILTTI-------IFNDGEKAIVGSWFNQ 96
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
P++K+ K+GE + G ++ R N + N +LK++ + + + P Y
Sbjct: 97 -PYIKNY---FKIGEEYVLQGSLKEYRGN----LTINNAQILKNKCAEEVEER-KIIPKY 147
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL 446
P KG L +LL + L + + +P + +++ L L + IH+P++ E +
Sbjct: 148 PLKGDLKNNLLIKLVDSVLTNIDIG-ENLPIWLIEKYKFLSLDKSIRTIHKPENQKELEE 206
Query: 447 ARKRLIFDEF--FYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK- 503
+ +RL F E + L++ L + LE EG S + +
Sbjct: 207 SIRRLKFQELLAYCLKIAFLKEYLE----------------------TATEGISFIVSEE 244
Query: 504 ---LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
L+ LP+ LT++Q + EI D ++ PMNRLLQGDVG GKT++A ++ VI +G
Sbjct: 245 INNLIEVLPFKLTNAQNKVLQEIFKDQEKEKPMNRLLQGDVGSGKTIIALISLFNVIKNG 304
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
YQ + PTE+LA QHYE LKL + + I LL GS V + I++ L+ G I
Sbjct: 305 YQGVMLAPTEILAVQHYEEALKLFKDFNLN-----IELLIGSIKVSSKKEIKEKLKEGKI 359
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
L+IGTH+LI + VEF L + I DEQ RFGV+QR + M+N S
Sbjct: 360 DLIIGTHALIEDDVEFYNLGMVITDEQHRFGVMQRSK---------------MLNKGKS- 403
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
L MSATPIPR+L L+LYGD+ L+ I +LPPGR I TY +
Sbjct: 404 -------VDTLVMSATPIPRSLTLSLYGDLDLSIIDELPPGRQKIDTYYV 446
>gi|441178342|ref|ZP_20970018.1| ATP-dependent DNA helicase RecG [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440614515|gb|ELQ77780.1| ATP-dependent DNA helicase RecG [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 735
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 156/523 (29%), Positives = 236/523 (45%), Gaps = 79/523 (15%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLE--V 283
E G T+ LLHH+PR YA+ RG S L+ V
Sbjct: 22 EQLGLNTVGDLLHHYPRRYAE-----------------------RGELTRLSDLPLDEHV 58
Query: 284 IVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKV---G 340
V +AD V+ ++G+ +++ + L R + F K I HK G
Sbjct: 59 TVVARVADAR------VLKFNNGRGQRLEVTLTDG--SGRLQLVFFGKGIHKPHKELLPG 110
Query: 341 EFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDT 400
+GKV EY + +D + GR PIYP+ + + +
Sbjct: 111 RRAMFAGKVSVFNRKLQLAHPEYALLDGEDGEAAVDAFAGRLMPIYPACQQMASWKIAKA 170
Query: 401 IARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQ 460
+ L + DP+P+ + LL L +A +H+P+ + + AR RL +DE F LQ
Sbjct: 171 VDAVLPSAREALDPLPEALRAGRALLPLPEALEKVHRPRTKADIEDARSRLKWDEAFVLQ 230
Query: 461 LGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAI 520
+ L + E L +P ++ + + LP++LT Q
Sbjct: 231 VA--------LARRRMAETQLPATPRPLTPGGLLDAFDA-------KLPFTLTEGQQKVS 275
Query: 521 SEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHL 580
EI DL PM+RLLQG+VG GKT+VA A + V+ +G QAA + PTE+LA QH+ +
Sbjct: 276 REIFDDLATDHPMHRLLQGEVGSGKTMVALRAMLAVVDTGGQAAMLAPTEVLAQQHHRSI 335
Query: 581 LKLLDNMEED------KHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKV 634
+++ + E + K+ LLTGS R DL TG+ +VIGTH+LI +KV
Sbjct: 336 TEMMGELAEGGMLGGAEQGTKVVLLTGSMGAAARRQALLDLVTGEAGIVIGTHALIEDKV 395
Query: 635 EFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMS 694
+F L L +VDEQ RFGV QR K PH+L M+
Sbjct: 396 QFHDLGLVVVDEQHRFGVEQRDALRGK----------------------GKQPPHLLVMT 433
Query: 695 ATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGY 737
ATPIPRT+A+ ++GD+ + + LP GR PI ++++ +K +
Sbjct: 434 ATPIPRTVAMTVFGDLETSVLDQLPAGRSPIASHVVPAKDKPH 476
>gi|319955243|ref|YP_004166510.1| ATP-dependent DNA helicase recg [Cellulophaga algicola DSM 14237]
gi|319423903|gb|ADV51012.1| ATP-dependent DNA helicase RecG [Cellulophaga algicola DSM 14237]
Length = 701
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/355 (36%), Positives = 195/355 (54%), Gaps = 57/355 (16%)
Query: 384 PIYPS-----KGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQ 437
P+YPS G+ +L I + L F + + +I +E L+ +A IH
Sbjct: 151 PVYPSTEKLSNKGITNRVLSKLIQQIFVELNGKFTEALSPKIIEELHLISKSEAMFNIHF 210
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKP-----RLNAA 492
PK+ + A+ RL F+E FY+QL Q + +L K R ++
Sbjct: 211 PKNQELLAKAQFRLKFEELFYIQL------------QLIAKNMLHKKRIKGFPFDKVGTI 258
Query: 493 YMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLA 552
+ + +++ LP+ LT++Q + EI DL MNRLLQGDVG GKT+VA +A
Sbjct: 259 FTDFYNN-------HLPFELTNAQKRVLKEIRSDLGSNAQMNRLLQGDVGSGKTIVALMA 311
Query: 553 CMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIR 612
+ I +G+QA M PTE+LA QH+ + +LL+ + ++LLTGS ++I
Sbjct: 312 MLLAIDNGFQACLMAPTEILANQHFVGIQELLEGV-----GITVSLLTGSVKKSARKVIH 366
Query: 613 KDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMA 672
+ L++G++ ++IGTH+L+ +KV++ L LAIVDEQ RFGV QR SKL++ +
Sbjct: 367 EQLESGELQILIGTHALLEDKVQYKNLGLAIVDEQHRFGVAQR----SKLWHKNT----- 417
Query: 673 MVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PHVL M+ATPIPRTLA++LYGD+ ++ I +LPPGR PIKT
Sbjct: 418 -------------IPPHVLVMTATPIPRTLAMSLYGDLDISVIDELPPGRKPIKT 459
>gi|218265097|ref|ZP_03478685.1| hypothetical protein PRABACTJOHN_04395 [Parabacteroides johnsonii
DSM 18315]
gi|218221586|gb|EEC94236.1| hypothetical protein PRABACTJOHN_04395 [Parabacteroides johnsonii
DSM 18315]
Length = 698
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 156/436 (35%), Positives = 215/436 (49%), Gaps = 70/436 (16%)
Query: 317 KFFRGTRFTSIPFLKSIE---GKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDD 373
KF GT + + K I K K G V GK + Y + +ID L D
Sbjct: 85 KFTDGTGTIDLVWFKGINYVMDKIKTGVDYIVFGK--PTEFGHIYNIPHPDIDTLDQADK 142
Query: 374 LSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANF---------DPVPKEITQEFG 424
+ A G P Y + + S L +RA+Q L + +P +
Sbjct: 143 V---ANGLT-PFYNTSEKMKKSFLN---SRAVQNLQYTLLSGLNWTLPETLPPAVLNRIR 195
Query: 425 LLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRL----YQMLEGLGTQFEKEGL 480
++ +A +H P+ +D+ A+ RL FDE F++QL L + L+ G F G
Sbjct: 196 MMPFPEAIRNVHFPESVDKLRKAQLRLKFDELFFIQLNILRSSNLRKLKLKGIVFPSVG- 254
Query: 481 LDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGD 540
N Y E LP+ LT++Q + EI D+ MNRLLQGD
Sbjct: 255 ------DYFNTFYKE-----------YLPFELTNAQKRVVREIRADMGSGRQMNRLLQGD 297
Query: 541 VGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLT 600
VG GKT+VA L+ + + + QA M PTE+LATQHY ++ L +M+ K+ALLT
Sbjct: 298 VGSGKTLVALLSMLLAVDNHCQACMMAPTEILATQHYATVMGFLKDMD-----IKVALLT 352
Query: 601 GSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNS 660
GST K+ I + +G+I +VIGTH+LI E V FS+L LAI+DEQ RFGV QR R +
Sbjct: 353 GSTKKKERNKILPAIASGEIQIVIGTHALIEETVVFSSLGLAIIDEQHRFGVEQRSRLWT 412
Query: 661 KLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPP 720
K NS + PHVL M+ATPIPRTLA+ LYGD+ ++ I +LPP
Sbjct: 413 K-------------NS---------IVPHVLVMTATPIPRTLAMTLYGDLDVSVIDELPP 450
Query: 721 GRIPIKTYIIEGNEKG 736
GR PI+T N+K
Sbjct: 451 GRKPIQTVHRYDNKKA 466
>gi|15903582|ref|NP_359132.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae R6]
gi|421266688|ref|ZP_15717568.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae SPAR27]
gi|1150620|emb|CAA90280.1| MmsA [Streptococcus pneumoniae]
gi|15459203|gb|AAL00343.1| Branch migration of Holliday junctions, junction-specific DNA
helicase [Streptococcus pneumoniae R6]
gi|395866756|gb|EJG77884.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae SPAR27]
gi|1588991|prf||2209420A mmsA gene
Length = 671
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 163/532 (30%), Positives = 253/532 (47%), Gaps = 99/532 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F E FY Q+ L+ L ++ +G + + WS
Sbjct: 197 LAEYKQALRRIKFAELFYFQM-----QLQTLKSENRVQG-----------SGLVLNWSQE 240
Query: 501 TKKLLRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
++A LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +
Sbjct: 241 KVTAVKASLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTA 300
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
GYQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+
Sbjct: 301 GYQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGE 353
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 354 ADLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN- 398
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 --------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|424842063|ref|ZP_18266688.1| ATP-dependent DNA helicase RecG [Saprospira grandis DSM 2844]
gi|395320261|gb|EJF53182.1| ATP-dependent DNA helicase RecG [Saprospira grandis DSM 2844]
Length = 702
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 127/315 (40%), Positives = 177/315 (56%), Gaps = 40/315 (12%)
Query: 413 DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLG 472
+ +P+ + L +A +GIH PK + + D AR+R IF+E F+LQL R+ Q + L
Sbjct: 184 ETLPQYLLDSMKLPSRLEALIGIHFPKTLAQKDQARQRFIFEELFFLQL-RILQR-KSL- 240
Query: 473 TQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVP 532
Q E +G L + N Y L + LT +Q + EI DL
Sbjct: 241 KQLETKGHLFPHIGGFFNGFYQNN-----------LKFELTGAQKRVLREIRKDLGSGQQ 289
Query: 533 MNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKH 592
MNRLLQGDVG GKTVV F++ + + + +QAA M PTE+LA QH E LLK+ + ++
Sbjct: 290 MNRLLQGDVGSGKTVVGFMSMLMALDNDFQAALMAPTEILAQQHVESLLKMAEGLD---- 345
Query: 593 KPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGV 652
+I LLTGS Q R + +DL G I ++IGTH+LI + V F L L I+DEQ RFGV
Sbjct: 346 -IRIELLTGSIKGVQRRELLEDLAEGRIHILIGTHALIEDAVVFKNLGLVIIDEQHRFGV 404
Query: 653 VQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSL 712
+QR + K N+ G PHVL M+ATPIPRTLA+ +YGD+ +
Sbjct: 405 MQRAKMWKK-------------NAAGP--------PHVLVMTATPIPRTLAMTVYGDLEV 443
Query: 713 TQITDLPPGRIPIKT 727
+ I ++PPGR+PI+T
Sbjct: 444 SAIDEMPPGRLPIQT 458
>gi|268317690|ref|YP_003291409.1| ATP-dependent DNA helicase RecG [Rhodothermus marinus DSM 4252]
gi|262335224|gb|ACY49021.1| ATP-dependent DNA helicase RecG [Rhodothermus marinus DSM 4252]
Length = 700
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 167/542 (30%), Positives = 243/542 (44%), Gaps = 90/542 (16%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGE 265
+L + + G+ R L G +T+R LLH+FPR Y D
Sbjct: 6 ILSTEVRYLAGVGPRRAEVLARVGVHTVRDLLHYFPRRYLDRST---------------- 49
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFT 325
I+ R + E + + T +G + G+ +K + + + G R
Sbjct: 50 IVPLRRLD--------ERMGSVTVVGTVRVAG-----VVEGKGRKRFELILEDESGGRLK 96
Query: 326 SIPF--LKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY 383
+ F L + K G+ V GKV+ R + M + D L E + A GR
Sbjct: 97 CVWFNRLNWVAKAFKPGDRVAFHGKVQ--RFGYTFSMTHPDFDRLDGEG--AALATGRII 152
Query: 384 PIYPSKGGLN-ASLLRDTIARALQALPANF-----DPVPKEITQEFGLLCLFDAYMGIHQ 437
+YP L L T R L + +P+ I +GL+ A +H
Sbjct: 153 ALYPGGAALEKVGLTSRTFRRILYTFFKQHGLKLPEILPEWIRTRYGLMDGRVALRAVHF 212
Query: 438 PKHIDEADLARKRLIFDEFFYLQL--GRLYQMLEGL-GTQFEKEGLLDKYRKPRLNAAYM 494
P+ E AR+RL F+E F++QL R Q+ + + G +F G
Sbjct: 213 PRSQAELAQARERLKFEELFFIQLMLARTKQIRQAVAGPRFGPPG--------------- 257
Query: 495 EGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACM 554
+ L LP+ LT++Q A+ +II D + MNRL+QGDVG GKTVVA A +
Sbjct: 258 ---ERFHRFLNEILPFELTNAQKRALEDIIRDTTSGLQMNRLIQGDVGSGKTVVAMAAIL 314
Query: 555 EVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKD 614
+ +GYQ+AFMVPTE+LA QHY ++ + LD + ++ LL G I D
Sbjct: 315 HAVDNGYQSAFMVPTEILAEQHYANMRRYLDPL-----GVEVRLLLGGQRKSLREEILAD 369
Query: 615 LQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMV 674
L G + +GTH++I E V+F L LAIVDEQ RFGVVQR SK
Sbjct: 370 LAEGRAHVAVGTHAVIQETVQFHRLGLAIVDEQHRFGVVQRAELFSK------------- 416
Query: 675 NSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
PH+L M+ATPIPR+LA+ LYGD+ ++ I + P GR P+ T+I
Sbjct: 417 ----------GENPHMLLMTATPIPRSLAMTLYGDLDVSIIDERPAGRKPVITWIRSEKR 466
Query: 735 KG 736
+G
Sbjct: 467 RG 468
>gi|423340887|ref|ZP_17318602.1| ATP-dependent DNA helicase RecG [Parabacteroides johnsonii
CL02T12C29]
gi|409223349|gb|EKN16285.1| ATP-dependent DNA helicase RecG [Parabacteroides johnsonii
CL02T12C29]
Length = 698
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 156/436 (35%), Positives = 215/436 (49%), Gaps = 70/436 (16%)
Query: 317 KFFRGTRFTSIPFLKSIE---GKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDD 373
KF GT + + K I K K G V GK + Y + +ID L D
Sbjct: 85 KFTDGTGTIDLVWFKGINYVMDKIKTGVDYIVFGK--PTEFGHIYNIPHPDIDTLDQADK 142
Query: 374 LSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANF---------DPVPKEITQEFG 424
+ A G P Y + + S L +RA+Q L + +P +
Sbjct: 143 V---ANGLT-PFYNTSEKMKKSFLN---SRAVQNLQYTLLSGLNWTLPETLPPAVLNRIR 195
Query: 425 LLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRL----YQMLEGLGTQFEKEGL 480
++ +A +H P+ +D+ A+ RL FDE F++QL L + L+ G F G
Sbjct: 196 MMPFPEAIRNVHFPESVDKLRKAQLRLKFDELFFIQLNILRSSNLRKLKLKGIVFPSVG- 254
Query: 481 LDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGD 540
N Y E LP+ LT++Q + EI D+ MNRLLQGD
Sbjct: 255 ------DYFNTFYKE-----------YLPFELTNAQKRVVREIRADMGSGRQMNRLLQGD 297
Query: 541 VGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLT 600
VG GKT+VA L+ + + + QA M PTE+LATQHY ++ L +M+ K+ALLT
Sbjct: 298 VGSGKTLVALLSMLLAVDNHCQACMMAPTEILATQHYATVMGFLKDMD-----IKVALLT 352
Query: 601 GSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNS 660
GST K+ I + +G+I +VIGTH+LI E V FS+L LAI+DEQ RFGV QR R +
Sbjct: 353 GSTKKKERNKILPAIASGEIQIVIGTHALIEETVVFSSLGLAIIDEQHRFGVEQRSRLWT 412
Query: 661 KLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPP 720
K NS + PHVL M+ATPIPRTLA+ LYGD+ ++ I +LPP
Sbjct: 413 K-------------NS---------IVPHVLVMTATPIPRTLAMTLYGDLDVSVIDELPP 450
Query: 721 GRIPIKTYIIEGNEKG 736
GR PI+T N+K
Sbjct: 451 GRKPIQTVHRYDNKKA 466
>gi|194334659|ref|YP_002016519.1| ATP-dependent DNA helicase RecG [Prosthecochloris aestuarii DSM
271]
gi|194312477|gb|ACF46872.1| ATP-dependent DNA helicase RecG [Prosthecochloris aestuarii DSM
271]
Length = 712
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 169/546 (30%), Positives = 248/546 (45%), Gaps = 100/546 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI--DLDDGQYFIFIGEIIS 268
++ V G+ LE G ++R L +FPR Y D + L +G+ +G +
Sbjct: 13 LTFVKGVGPEKARVLEAEGLGSVRDLYEYFPRRYLDRSRLKSIGSLAEGELVTVVGTVSR 72
Query: 269 SRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIP 328
+ ++ + V + +G+ V+ +FRG ++
Sbjct: 73 AEKERSSSGKALFRVWL-------SDGTGNLVLT---------------WFRG----AVY 106
Query: 329 FLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDED---------DLSLRAK 379
F K + + G+ + V GKV H +M+ + D L+D D L
Sbjct: 107 FSKMV----RPGDLLAVHGKVGFF--CGHAQMQHPDFDRLQDASAESGAKGVSDADLFHT 160
Query: 380 GRPYPIYP-----SKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYM 433
G P+YP K GL++ LR I RA+++ PA D +P I GLL + AY
Sbjct: 161 GGIIPLYPVTDAMKKAGLDSRRLRAIILRAMESHPAFIDEHLPDSIIASHGLLEINLAYR 220
Query: 434 GIHQPKHIDEADLARKRLIFDEFFYLQLG---RLY-QMLEGLGTQFEKEGLLDKYRKPRL 489
IH P + + A R ++E FY QL R + Q +FE+ G DK
Sbjct: 221 QIHCPVSSEMLERAVHRFKWNELFYAQLFFALRYHAQKKNNAAVRFERSG--DK------ 272
Query: 490 NAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVA 549
T L LP+S+T +Q A+ EI DL+ MNRLLQGDVG GKT+VA
Sbjct: 273 -----------TALLYSLLPFSMTDAQKQAVREIYRDLRSGSQMNRLLQGDVGSGKTLVA 321
Query: 550 FLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSR 609
+ + +G QAA M PTE+LA QH+ + K + + ++ LLTGS K+
Sbjct: 322 MFSMALAVDNGLQAAIMAPTEILAFQHWLGIRKYCEPL-----GLRVGLLTGSQKKKERD 376
Query: 610 MIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSS 669
+I L+ G L +GTH++I E+V F L L I+DEQ RFGV+QR
Sbjct: 377 VILSGLEDGSYDLAVGTHAMIEERVRFKRLGLIIIDEQHRFGVLQRKALQ---------- 426
Query: 670 GMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYI 729
D+ + PHVL M+ATPIPRTL + +GD+ +T I +LP GR I T +
Sbjct: 427 -------------DKSVNPHVLLMTATPIPRTLCMGAFGDLDVTLIDELPGGRKAIVTRL 473
Query: 730 IEGNEK 735
N K
Sbjct: 474 CHENSK 479
>gi|443623862|ref|ZP_21108350.1| putative ATP-dependent DNA helicase RecG [Streptomyces
viridochromogenes Tue57]
gi|443342643|gb|ELS56797.1| putative ATP-dependent DNA helicase RecG [Streptomyces
viridochromogenes Tue57]
Length = 735
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 156/528 (29%), Positives = 246/528 (46%), Gaps = 85/528 (16%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNAQI----DLDDGQYFIFIGEIISSRGMKAGCSFSFL 281
E+ G +T+ LLHH+PR Y + Q+ DL ++ + ++ +R +F
Sbjct: 25 EHLGLHTVGDLLHHYPRRYE--ERGQLTHLADLPMDEHVTVVAQVADAR------LHTF- 75
Query: 282 EVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGT-RFTSIPFLKSIEGKHKV- 339
A T+ G GQ+ ++ + G+ R + F + HK
Sbjct: 76 --------ASTKAPRG-------KGQRLEVTI-----TDGSGRLQLVFFGNGVHKPHKEL 115
Query: 340 --GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRA-KGRPYPIYPSKGGLNASL 396
G +GKV N ++ ++L+ + + ++ G PIYP+ L +
Sbjct: 116 LPGTRAMFAGKVSVF--NRRLQLAHPAYELLRGDAEETVETWAGALIPIYPATAKLESWK 173
Query: 397 LRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEF 456
+ I L ++ DP+P + + GL+ L +A + IH+P + + AR RL +DE
Sbjct: 174 IGKAIQTVLPSVQEAVDPLPDSLREGRGLVSLPEALLKIHRPHTKADIEDARSRLKWDEA 233
Query: 457 FYLQLGRLYQMLEGLGTQFEKEGLLDKY-RKPRLNAAYMEGWSSLTKKLLRALPYSLTSS 515
F LQ+ L + + L R+P+ N L LP++LT
Sbjct: 234 FVLQVA--------LARRRHADAQLPAVARRPQPN--------GLLAAFDDRLPFTLTEG 277
Query: 516 QLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQ 575
Q EI DL PM+RLLQG+VG GKT+VA A + V+ +G QAA + PTE+LA Q
Sbjct: 278 QQKVSKEIFDDLATEHPMHRLLQGEVGSGKTMVALRAMLAVVDAGGQAAMLAPTEVLAQQ 337
Query: 576 HYEHLLKLLDNMEED------KHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSL 629
H+ +++++ + E K+ LLTGS R DL TG+ +VIGTH+L
Sbjct: 338 HHRSIVEMMGELAEGGMLGGADQATKVVLLTGSMGAAARRQALLDLVTGEAGIVIGTHAL 397
Query: 630 IAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPH 689
I +KV+F L L +VDEQ RFGV QR K PH
Sbjct: 398 IEDKVQFHDLGLVVVDEQHRFGVEQRDALRGK----------------------GKQPPH 435
Query: 690 VLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGY 737
+L M+ATPIPRT+A+ ++GD+ + + LP GR PI ++++ +K +
Sbjct: 436 LLVMTATPIPRTVAMTVFGDLETSVLDQLPAGRSPIASHVVPAADKPH 483
>gi|229552461|ref|ZP_04441186.1| DNA helicase RecG [Lactobacillus rhamnosus LMS2-1]
gi|258539832|ref|YP_003174331.1| ATP-dependent DNA helicase RecG [Lactobacillus rhamnosus Lc 705]
gi|385835484|ref|YP_005873258.1| ATP-dependent DNA helicase RecG [Lactobacillus rhamnosus ATCC 8530]
gi|229314198|gb|EEN80171.1| DNA helicase RecG [Lactobacillus rhamnosus LMS2-1]
gi|257151508|emb|CAR90480.1| ATP-dependent DNA helicase RecG [Lactobacillus rhamnosus Lc 705]
gi|355394975|gb|AER64405.1| ATP-dependent DNA helicase RecG [Lactobacillus rhamnosus ATCC 8530]
Length = 679
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 167/545 (30%), Positives = 243/545 (44%), Gaps = 101/545 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L + +PG+ + L + G +T+ +L +FP Y DL+ +
Sbjct: 3 LTDPVRVLPGVGPKREEGLASLGIHTVGDVLFYFPFRYDDLKVKDL-------------- 48
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNID--------SGQKKKIYLHLKKF 318
E AD E + VV D + + L +++
Sbjct: 49 --------------------AEAADQEKLTIKGVVVADPVISRFGPHRSRVNVKLQVERS 88
Query: 319 FRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRA 378
F + P+LK + ++G+ V GK A R + + I + +D S+ A
Sbjct: 89 VILVTFYNQPWLKD---RFQMGDEAAVFGKWDAQRRS----LTGMKILATQSQDQPSMAA 141
Query: 379 KGRPYPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQ 437
IY + L + I A N D +P I + L+ G+H
Sbjct: 142 ------IYTVNKNVRMGTLLELIKAAWARDHQNIHDLIPASIRAHYRLMSDEQLVHGMHF 195
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGW 497
P EA AR+ +F EFF QL Q L+ L GL Y L A
Sbjct: 196 PDTQQEAKAARRSGVFREFFLFQLQ--IQALKQLNDN-ANNGLAIPYDNQALRA------ 246
Query: 498 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
L+ LP+SLT++Q ++EI D+++P MNRLLQGDVG GKT+VA + +
Sbjct: 247 ------LIATLPFSLTNAQKRVVNEICADMRRPNHMNRLLQGDVGSGKTIVAAIVLYAAV 300
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
+GYQAA MVPTE+LA QH+ L L + K+ LLTGST K+ R + +L+
Sbjct: 301 TAGYQAALMVPTEVLAEQHFAKLEALFADF-----PVKLGLLTGSTTAKKRREMLAELRD 355
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
G + L+IGTH+LI + V+F AL L ++DEQ RFGV QR K
Sbjct: 356 GTLNLIIGTHALIQKGVDFKALGLVVIDEQHRFGVNQRKILQEK---------------- 399
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGY 737
P +L+M+ATPIPRTLA+ YG+M ++ I +LP GR PI T + N+ G
Sbjct: 400 -------GQKPDLLSMTATPIPRTLAITAYGEMDVSTIDELPAGRKPITTTWLRKNQVG- 451
Query: 738 ENVYK 742
VY+
Sbjct: 452 -QVYR 455
>gi|321315353|ref|YP_004207640.1| ATP-dependent DNA helicase RecG [Bacillus subtilis BSn5]
gi|320021627|gb|ADV96613.1| ATP-dependent DNA helicase RecG [Bacillus subtilis BSn5]
Length = 682
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 161/543 (29%), Positives = 249/543 (45%), Gaps = 119/543 (21%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISS 269
I+ + G+ L G Y + LL++FP Y D
Sbjct: 8 SIANIKGIGPETEKTLHELGIYDISDLLNYFPYRYDD----------------------- 44
Query: 270 RGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSG----------QKKKIYLHLKKFF 319
E+ D E DE V ++ KK+ L +
Sbjct: 45 -----------------YELRDLEEVKHDERVTVEGKVHSEPSLTYYGKKRNRLTFRLLV 87
Query: 320 RGTRFTSI----PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKD---ED 372
T++ P+LK K +G V VSGK R N ++ LK+ ++
Sbjct: 88 GHYLITAVCFNRPYLKK---KLSLGSVVTVSGKWDKHRQN-------ISVQELKNGPHQE 137
Query: 373 DLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDA 431
D S+ P+Y K + ++R I +AL + DP+P+++ + + L + A
Sbjct: 138 DKSIE------PVYSVKENVTVKMMRRFIQQALTQYADSLPDPLPEKLRKSYKLPDYYQA 191
Query: 432 YMGIHQPKHIDEADLARKRLIFDEFFYLQLG-RLYQMLEGLGTQFEKEGLLDKYRKPRLN 490
+HQP+ + LAR+R +++EF QL + ++ E TQ G+ ++ L
Sbjct: 192 LKAMHQPETREALKLARRRFVYEEFLLFQLKMQAFRKAEREQTQ----GIRQRFSNEEL- 246
Query: 491 AAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAF 550
+ +++LP+ LT++Q + EI D+ P MNRLLQGDVG GKT VA
Sbjct: 247 -----------MRFIKSLPFPLTNAQSRVLREITADMSSPYRMNRLLQGDVGSGKTAVAA 295
Query: 551 LACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRM 610
+A I SGYQ A MVPTE+LA QH + L+ L +K +ALLT S K+ +
Sbjct: 296 IALYAAILSGYQGALMVPTEILAEQHADSLVSLF-----EKWDVSVALLTSSVKGKRRKE 350
Query: 611 IRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSG 670
+ + L G+I +++GTH+LI ++VEF AL L I DEQ RFGV QR + +K
Sbjct: 351 LLERLAAGEIDILVGTHALIQDEVEFKALSLVITDEQHRFGVEQRKKLRNK--------- 401
Query: 671 MAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
P VL M+ATPIPRTLA+ ++G+M ++ I ++P GR I+TY +
Sbjct: 402 --------------GQDPDVLFMTATPIPRTLAITVFGEMDVSVIDEMPAGRKRIETYWV 447
Query: 731 EGN 733
+ +
Sbjct: 448 KHD 450
>gi|421768795|ref|ZP_16205505.1| ATP-dependent DNA helicase RecG [Lactobacillus rhamnosus LRHMDP2]
gi|421771053|ref|ZP_16207714.1| ATP-dependent DNA helicase RecG [Lactobacillus rhamnosus LRHMDP3]
gi|411185644|gb|EKS52771.1| ATP-dependent DNA helicase RecG [Lactobacillus rhamnosus LRHMDP2]
gi|411186488|gb|EKS53612.1| ATP-dependent DNA helicase RecG [Lactobacillus rhamnosus LRHMDP3]
Length = 679
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 167/545 (30%), Positives = 243/545 (44%), Gaps = 101/545 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L + +PG+ + L + G +T+ +L +FP Y DL+ +
Sbjct: 3 LTDPVRVLPGVGPKREEGLASLGIHTVGDVLFYFPFRYDDLKVKDL-------------- 48
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNID--------SGQKKKIYLHLKKF 318
E AD E + VV D + + L +++
Sbjct: 49 --------------------AEAADQEKLTIKGVVVADPVISRFGPHRSRVNVKLQVERS 88
Query: 319 FRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRA 378
F + P+LK + ++G+ V GK A R + + I + +D S+ A
Sbjct: 89 VILVTFYNQPWLKD---RFQMGDEAAVFGKWDAQRRS----LTGMKILATQSQDQPSMAA 141
Query: 379 KGRPYPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQ 437
IY + L + I A N D +P I + L+ G+H
Sbjct: 142 ------IYTVNKNVRMGTLLELIKAAWARDHQNIHDLIPASIRAHYRLMSDEQLVHGMHF 195
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGW 497
P EA AR+ +F EFF QL Q L+ L GL Y L A
Sbjct: 196 PDTPQEAKAARRSGVFREFFLFQLQ--IQALKQLNDN-ANNGLAIPYDNQALRA------ 246
Query: 498 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
L+ LP+SLT++Q ++EI D+++P MNRLLQGDVG GKT+VA + +
Sbjct: 247 ------LIATLPFSLTNAQKRVVNEICADMRRPNHMNRLLQGDVGSGKTIVAAIVLYAAV 300
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
+GYQAA MVPTE+LA QH+ L L + K+ LLTGST K+ R + +L+
Sbjct: 301 TAGYQAALMVPTEVLAEQHFAKLEALFADF-----PVKLGLLTGSTTAKKRREMLAELRD 355
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
G + L+IGTH+LI + V+F AL L ++DEQ RFGV QR K
Sbjct: 356 GTLNLIIGTHALIQKGVDFKALGLVVIDEQHRFGVNQRKILQEK---------------- 399
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGY 737
P +L+M+ATPIPRTLA+ YG+M ++ I +LP GR PI T + N+ G
Sbjct: 400 -------GQKPDLLSMTATPIPRTLAITAYGEMDVSTIDELPAGRKPITTTWLRKNQVG- 451
Query: 738 ENVYK 742
VY+
Sbjct: 452 -QVYR 455
>gi|376261485|ref|YP_005148205.1| ATP-dependent DNA helicase RecG [Clostridium sp. BNL1100]
gi|373945479|gb|AEY66400.1| ATP-dependent DNA helicase RecG [Clostridium sp. BNL1100]
Length = 690
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 170/557 (30%), Positives = 258/557 (46%), Gaps = 109/557 (19%)
Query: 202 SIEPLLDKCISCVPGLSKR---LYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDD 256
+I L K I + G+ + L+ +LE F+ LL ++PR Y D + + DL +
Sbjct: 5 TINDLKQKSIRYIKGVGESRESLFKKLEIHNFF---DLLTYYPRDYEDRSSIKNIADLQN 61
Query: 257 GQYFIFIGEIISSRGM---KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYL 313
G F G I+S+ + K G + S + + E ++G
Sbjct: 62 GVPCSFEGTIVSNVSLTRPKRGMTLSRVSI---------EDSTG---------------- 96
Query: 314 HLKKFFRGTRFTSIPFLKS-IEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDED 372
+ T+I F + ++ +GE GK A R N ++ V +
Sbjct: 97 ---------KITAIWFNQPYVKNSLALGENYIFFGK--AERKLNKLQIVN---PVFEKTS 142
Query: 373 DLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALP--ANFDPVPKEITQEFGLLCLFD 430
++ + P+Y S L +++R + A++ + D +P + + + L
Sbjct: 143 SKDMKKSLKILPVYSSTKDLGQNIIRSVVYEAIKGINDIELEDMIPLPVREAYKLADKIY 202
Query: 431 AYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLN 490
+ IH P + + AR RL+F+E F LQLG L + L T R+
Sbjct: 203 SIKQIHFPASTQDIERARFRLVFEELFMLQLGLLS--YKSLATD------------TRVG 248
Query: 491 AAY-----MEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGK 545
Y MEG+ + +LP+ LT++Q +E+ D++ MNRL+QGDVG GK
Sbjct: 249 IKYTHIDEMEGF-------IESLPFELTNAQKKVFAEVEKDMESSHVMNRLVQGDVGSGK 301
Query: 546 TVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPV 605
T++A LA + + GYQ A MVPTE+LA QH++ + L D+ + LL+ S
Sbjct: 302 TMIAVLALFKAVKCGYQGALMVPTEILAEQHFKSIKSLFDSF-----GISVELLSSSLTK 356
Query: 606 KQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYT 665
KQ ++I ++L+ G +VIGTH+LI + VEF L L I DEQ RFGV QR K
Sbjct: 357 KQKQLIVEELKEGKTDVVIGTHALIEDYVEFKQLGLVITDEQHRFGVRQRTILTEK---- 412
Query: 666 SMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
P VL M+ATPIPRTLAL LYGD+ ++ I +LPPGR PI
Sbjct: 413 -------------------GQNPDVLVMTATPIPRTLALILYGDLDISIIDELPPGRKPI 453
Query: 726 KTYIIEGNEKGYENVYK 742
KTY + NE E + K
Sbjct: 454 KTYSV--NETMRERINK 468
>gi|169827086|ref|YP_001697244.1| ATP-dependent DNA helicase RecG [Lysinibacillus sphaericus C3-41]
gi|168991574|gb|ACA39114.1| ATP-dependent DNA helicase recG [Lysinibacillus sphaericus C3-41]
Length = 688
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/354 (35%), Positives = 180/354 (50%), Gaps = 44/354 (12%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHID 442
P+Y KG + R + + L AN D +P+ + LL + + GIH P+
Sbjct: 149 PVYSLKGLIQQKRFRKYMRQVLDEYGANLPDAIPQHFQDSYKLLPIQEGLEGIHFPQDAQ 208
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
A AR+R ++E QL + L K RK ++ L +
Sbjct: 209 HAKQARRRFAYEELLNFQL---------------RMQALRKVRKENEQGTVIQYDVHLLR 253
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
+ + ALPY LT++Q ++EI DLK+P MNRLLQGDVG GKTVVA + + +GYQ
Sbjct: 254 EFIAALPYELTNAQKRVVNEICKDLKEPHRMNRLLQGDVGSGKTVVAAIGLYAAVSAGYQ 313
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
A M PTE+LA QH E+L + ++ALL+GST +K+ R+I DL G++ +
Sbjct: 314 GALMAPTEILAEQHLENLQEWFQPF-----GVRVALLSGSTKMKERRVILADLANGELDI 368
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
VIGTH+LI V F L I DEQ RFGV QR
Sbjct: 369 VIGTHALIQPDVIFKKLGFVITDEQHRFGVEQRRILR----------------------- 405
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKG 736
D+ P VL M+ATPIPRTLA+ +G+M ++ I ++P GR I+T+ ++ + G
Sbjct: 406 DKGENPDVLFMTATPIPRTLAITAFGEMDVSMIDEMPAGRKQIETHWMKKEQFG 459
>gi|408828131|ref|ZP_11213021.1| ATP-dependent DNA helicase RecG [Streptomyces somaliensis DSM
40738]
Length = 739
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 155/527 (29%), Positives = 239/527 (45%), Gaps = 90/527 (17%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQ--NAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEV 283
E +T+ LLHH+PR YA+ A DL ++ + ++ +R
Sbjct: 20 ETLDLHTVGDLLHHYPRRYAERGELTAMADLPLDEHVTVVAQVADAR------------- 66
Query: 284 IVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHK---VG 340
T SG GQ+ ++ + R + F K + HK G
Sbjct: 67 --------LHTYSGSR----GRGQRLEVTITDGS----GRLRLVFFGKGVHKPHKDLLPG 110
Query: 341 EFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRA-KGRPYPIYPSKGGLNASLLRD 399
+GKV N ++ ++L+ + ++ A G PIYP+ L + +
Sbjct: 111 TRAMFAGKVSLF--NRRLQLAHPAYELLRGDGGEAVDAWAGALIPIYPATTKLESWKIAK 168
Query: 400 TIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYL 459
+ L + DP+P + + GL L DA + IH+P+ + AR+RL +DE F L
Sbjct: 169 AVDAVLPRVHEAVDPLPPALREGRGLTALPDALLKIHRPRTRADVADARERLKWDEAFVL 228
Query: 460 QLG---RLY--QMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTS 514
Q+ R Y L + GLLD + LP++LT
Sbjct: 229 QVALARRRYADAQLPAVPRTPVPGGLLDAFDD--------------------RLPFTLTD 268
Query: 515 SQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLAT 574
Q + EI DL PM+RLLQG+VG GKT+VA A + V+ +G QAA + PTE+LA
Sbjct: 269 GQRAVSKEIFDDLATDHPMHRLLQGEVGSGKTMVALRAMLAVVDAGGQAAMLAPTEVLAQ 328
Query: 575 QHYEHLLKLLDNMEED------KHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHS 628
QH+ + +++ ++ + +H ++ LLTGS R DL TG+ +V+GTH+
Sbjct: 329 QHHRSITEMMGDLAQGGMLGGAEHATRVVLLTGSMGAAARRRALLDLATGEAGIVVGTHA 388
Query: 629 LIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAP 688
LI ++V F L L +VDEQ RFGV QR K P
Sbjct: 389 LIEDRVRFHDLGLVVVDEQHRFGVEQRDALRGK----------------------GEQPP 426
Query: 689 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
H+L M+ATPIPRT+A+ ++GD+ + + LP GR PI T+++ +K
Sbjct: 427 HLLVMTATPIPRTVAMTVFGDLETSVLDQLPAGRSPIATHVVPARDK 473
>gi|302879848|ref|YP_003848412.1| ATP-dependent DNA helicase RecG [Gallionella capsiferriformans
ES-2]
gi|302582637|gb|ADL56648.1| ATP-dependent DNA helicase RecG [Gallionella capsiferriformans
ES-2]
Length = 685
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/368 (37%), Positives = 193/368 (52%), Gaps = 48/368 (13%)
Query: 384 PIYPSKGGLNASLLRDTIARALQAL-PANFDPVPKEITQEFGLLCLFDAYMGIHQPKH-- 440
P+YP+ GL+ L+ IA AL+ L PA DP+P++ L FD+ +H P
Sbjct: 138 PVYPTTAGLSQLTLKKLIANALEVLNPA--DPLPEKFRHNLNLPGFFDSIRLLHNPTTDI 195
Query: 441 -----IDEADLARKRLIFDEFFYLQLG-RLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYM 494
D++ A +R+ FDE QL R++ K R R+ A +
Sbjct: 196 AACTLADKSHAAWRRIKFDELLAQQLSMRVHH----------------KERSRRIAPA-L 238
Query: 495 EGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACM 554
T LL+ LP+SLT +Q +EI DL +P PM RLL GDVG GKT+VA LA +
Sbjct: 239 PPQGHYTDSLLKILPFSLTKAQQKVYAEISADLARPHPMQRLLLGDVGSGKTIVAALAAL 298
Query: 555 EVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKD 614
+ I +GYQ A M PTE+LA QHY LKL + + P L+GS K R+ +
Sbjct: 299 QAIENGYQVALMAPTEILAEQHY---LKLTEWLSPLGIVP--VWLSGSLKKKDKRVAAEL 353
Query: 615 LQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMV 674
+ +G+ L IGTH+L E++ F L LAIVDEQ +FGV QR ++K
Sbjct: 354 IASGETWLAIGTHALFQEQITFHKLGLAIVDEQHKFGVQQRLALHAK------------- 400
Query: 675 NSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN- 733
D++ PH L MSATPIPRTLA++ Y D+ ++ I +LPPGR P+ T ++
Sbjct: 401 GKQPVAPDEKSSEPHQLMMSATPIPRTLAMSYYADLDVSVIDELPPGRTPVITKLVSDTR 460
Query: 734 -EKGYENV 740
E+ +E V
Sbjct: 461 REEVFERV 468
>gi|393785088|ref|ZP_10373242.1| ATP-dependent DNA helicase RecG [Bacteroides salyersiae CL02T12C01]
gi|392663109|gb|EIY56661.1| ATP-dependent DNA helicase RecG [Bacteroides salyersiae CL02T12C01]
Length = 698
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 156/437 (35%), Positives = 223/437 (51%), Gaps = 69/437 (15%)
Query: 305 SGQKKKIYLHLKKFFRGTRFTSIPFLKSIE---GKHKVGEFVCVSGK--VRAMRSNNHYE 359
G+++++ H F GT + + + I+ GK+KV E V GK V R N +
Sbjct: 76 EGRQRRLVAH---FSDGTGVVDLVWFQGIKFILGKYKVHEEYIVFGKPTVFGGRINVAHP 132
Query: 360 MREYNIDVLKDEDDLSLRAKG-RPYPIYPSK---GGLNASLLRDTIARALQALPANFDPV 415
+ID +L L A G +PY K LN+ + +A LQ + +P+
Sbjct: 133 ----DID---KTAELKLTATGLQPYYNTTEKMKRSFLNSHAIAKMMATVLQQIQ---EPL 182
Query: 416 PK----EITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGL 471
P+ +I + L+ L DA IH P + + A+ RL F+E FY+QL L
Sbjct: 183 PETLSSKILADHHLMPLTDALQNIHFPVNPEFLRKAQYRLKFEELFYVQLNIL------- 235
Query: 472 GTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLL-RALPYSLTSSQLSAISEIIWDLKQP 530
++ K+ R+ R E + R LP+ LT +Q + EI D+
Sbjct: 236 --RYSKD------RQRRYRGFVFETVGKVFNTFYSRNLPFELTGAQKRVLKEIRQDVGSG 287
Query: 531 VPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEED 590
MNRLLQGDVG GKT+VA ++ + + +GYQA M PTE+LA QHYE + +LL M+
Sbjct: 288 RQMNRLLQGDVGSGKTLVALMSMLMALDNGYQACMMAPTEILANQHYETIKELLFGMD-- 345
Query: 591 KHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRF 650
++ LLTGS K+ I L TGD+ ++IGTH++I + V FS+L ++DEQ RF
Sbjct: 346 ---IRVELLTGSVKGKKREAILSGLLTGDVRILIGTHAVIEDTVNFSSLGFVVIDEQHRF 402
Query: 651 GVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDM 710
GV QR R SK + P PHVL M+ATPIPRTLA+ LYGD+
Sbjct: 403 GVAQRARLWSK---------------NIQP-------PHVLVMTATPIPRTLAMTLYGDL 440
Query: 711 SLTQITDLPPGRIPIKT 727
++ I +LPPGR PI T
Sbjct: 441 DVSVIDELPPGRKPITT 457
>gi|424845008|ref|ZP_18269619.1| ATP-dependent DNA helicase RecG [Jonquetella anthropi DSM 22815]
gi|363986446|gb|EHM13276.1| ATP-dependent DNA helicase RecG [Jonquetella anthropi DSM 22815]
Length = 691
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 139/404 (34%), Positives = 203/404 (50%), Gaps = 46/404 (11%)
Query: 333 IEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGL 392
+E + G + + GKV R N E+ ++VL+ + ++ G PIYP L
Sbjct: 108 LERALQAGTELALWGKVN--RRGNRVELINPELEVLRGGQEPTI--IGTILPIYPGTAQL 163
Query: 393 NASLLRDTIARALQ-ALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRL 451
LR+ ++RA+ + + +P+ + E G A + +H+P AR RL
Sbjct: 164 PDRWLRELVSRAVDFGVSQLTETLPESLISERGWPDAKTAVLQMHRPTSRSGWLAARTRL 223
Query: 452 IFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYS 511
F+EF +LQ+G + G + R PRL+ L + L L +S
Sbjct: 224 AFEEFLWLQIG----------LALRRAGSDKEARAPRLDGLA----RPLRQAFLDRLGFS 269
Query: 512 LTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTEL 571
LT Q A +EI DL P MNRLLQGDVG GKT VA LA + + SG QA M PT++
Sbjct: 270 LTDDQRRATAEIDEDLMNPAGMNRLLQGDVGSGKTAVALLAMLRAVESGKQAVLMAPTQV 329
Query: 572 LATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIA 631
LA QH+ + + LD + K ALL G + I L G I L IGTH+L+
Sbjct: 330 LAFQHWMTVRRWLDPL-----GVKTALLAGGLKQSEKEEILTGLADGTIDLAIGTHALVQ 384
Query: 632 EKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVL 691
E V+F+ L + ++DEQ RFGV+QR +++ S G PH L
Sbjct: 385 EGVDFADLGVVVIDEQHRFGVLQRRTLSAR------SGGQ----------------PHRL 422
Query: 692 AMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
M+ATPIPRTLAL++YGD+SL+ + P GR+PI+T + +++
Sbjct: 423 VMTATPIPRTLALSIYGDLSLSTLRHKPAGRLPIRTSWVSESKR 466
>gi|418076911|ref|ZP_12714144.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47502]
gi|353747051|gb|EHD27709.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47502]
Length = 671
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 162/532 (30%), Positives = 253/532 (47%), Gaps = 99/532 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ L+ L ++ +G + + WS
Sbjct: 197 LAEYKQALRRIKFEELFYFQM-----QLQTLKSENRVQG-----------SGLVLDWSQE 240
Query: 501 TKKLLRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
++A LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +
Sbjct: 241 KVTAVKASLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTA 300
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
GYQAA MVPTE+LA QH+E L L N+ K+ LLTGS + R + + + G+
Sbjct: 301 GYQAALMVPTEILAEQHFESLQNLFPNL-------KLVLLTGSLKAAEKREVLETIAKGE 353
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 354 ADLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN- 398
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 --------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|381336129|ref|YP_005173904.1| ATP-dependent DNA helicase RecG [Leuconostoc mesenteroides subsp.
mesenteroides J18]
gi|356644095|gb|AET29938.1| ATP-dependent DNA helicase RecG [Leuconostoc mesenteroides subsp.
mesenteroides J18]
Length = 669
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 163/527 (30%), Positives = 250/527 (47%), Gaps = 90/527 (17%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADL-QNAQIDLDDGQYFIFIGEIISS 269
++ +PG+ + L G +T+ L+++FP Y DL + + DG+ F G I+S+
Sbjct: 1 MNILPGVGPKRLDALHEIGIFTIEDLINYFPFRYEDLGERLPSETLDGEKATFKG-IVST 59
Query: 270 RGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPF 329
+ F + + L ++ F + P+
Sbjct: 60 PAVVTRFGKRF---------------------------QTRFGLMIEHENVRVSFFNQPW 92
Query: 330 L-KSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPS 388
+ +++E VG+ V V G A +++ + + + KD ++L PIYPS
Sbjct: 93 IAQNVE----VGQEVAVYGTYDAAKAS----LTGMKV-ISKDSNELD--------PIYPS 135
Query: 389 KGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA 447
++A +R I A + VP +I Q++ LL +H P +++A LA
Sbjct: 136 SKQISAKTIRHLIEIAWADVRGTVGSLVPDKIRQKYRLLDRNTQIENMHFPADMEQAKLA 195
Query: 448 RKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRA 507
R+ + F+EFF Q+ RL Q+L+ F EG+ Y LN K
Sbjct: 196 RRSIAFEEFFIFQM-RL-QLLKLADKNFSGEGI--NYDSKALN------------KFEAG 239
Query: 508 LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMV 567
LP++LT +Q +SEI+ D K+PV MNRLLQGDVG GKTVVA +A V+ G QAA M
Sbjct: 240 LPFTLTGAQQKVVSEILKDQKRPVHMNRLLQGDVGSGKTVVAAIALYAVVTVGMQAALMA 299
Query: 568 PTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTH 627
PTE+LA QH +L + + D +I LLT R + +DL G I +++GTH
Sbjct: 300 PTEILAQQHAINLASMFEKSGVD---IRIELLTSGMKAAARRQLLEDLADGTIDILVGTH 356
Query: 628 SLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMA 687
+L+ V F L LA++DEQ RFGV QR + + +
Sbjct: 357 ALLQPDVMFHHLGLAVIDEQHRFGVNQRAKLR-----------------------ENGVN 393
Query: 688 PHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
P +LAM+ATPIPRTL++ YG+M ++ I LP GR I+T I N+
Sbjct: 394 PDILAMTATPIPRTLSITAYGEMDVSIIDQLPNGRKQIQTRKISHNQ 440
>gi|264680588|ref|YP_003280498.1| ATP-dependent DNA helicase RecG [Comamonas testosteroni CNB-2]
gi|262211104|gb|ACY35202.1| ATP-dependent DNA helicase RecG [Comamonas testosteroni CNB-2]
Length = 725
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 133/368 (36%), Positives = 193/368 (52%), Gaps = 49/368 (13%)
Query: 384 PIYPSKGGLNASLLRDTIARAL------QALPANFDPVPKEITQEFGLLCLFD---AYMG 434
P+YP+ L + LR IA AL + LP P + + GL +D A +
Sbjct: 163 PVYPATASLPQAYLRRAIASALLRADLSETLPPGQSPPIAQFYGQNGLQPAYDLRNALIF 222
Query: 435 IHQPKH-------IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKP 487
+H P D + A +RL +E QL +Q+E + + R P
Sbjct: 223 LHHPTPDVALVTLEDHSHPAWQRLKAEELLAQQL-----------SQYEAKRERARLRAP 271
Query: 488 RLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTV 547
L G + LT++ L LP+ LT +Q + EI D+++ +PM+RLLQGDVG GKTV
Sbjct: 272 VLRP--QAGMADLTQQFLAQLPFGLTGAQQRVVGEIRADMERRIPMHRLLQGDVGSGKTV 329
Query: 548 VAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQ 607
VA L+ + I +G+Q A M PTE+LA QH+ L+ L+ + K K+A L G+ K+
Sbjct: 330 VAALSAVACIEAGWQCALMAPTEILAEQHFGKLVGWLEPILAPLGK-KVAWLAGAQKKKE 388
Query: 608 SRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSM 667
+ +++G+ LV+GTH++I E+V+F L LA++DEQ RFGV QR KL T M
Sbjct: 389 RAAMLALVESGEAALVVGTHAVIQEQVQFKNLALAVIDEQHRFGVAQRLALRQKLAATGM 448
Query: 668 SSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
PH+L MSATPIPRTLA++ Y D+ ++ I +LPPGR PI T
Sbjct: 449 E-------------------PHLLMMSATPIPRTLAMSYYADLDVSTIDELPPGRTPIVT 489
Query: 728 YIIEGNEK 735
+I + K
Sbjct: 490 KLISDSRK 497
>gi|331085071|ref|ZP_08334158.1| ATP-dependent DNA helicase RecG [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330408771|gb|EGG88236.1| ATP-dependent DNA helicase RecG [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 685
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 157/524 (29%), Positives = 251/524 (47%), Gaps = 83/524 (15%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
+ + G+ ++ + G +T+ L+ +FPR Y D+ + + + + Q ++ + R
Sbjct: 7 VGELKGIGEKTEKLFQKLGVFTVGDLIRYFPRGY-DVYDPPVSIGEIQE----QKVQAVR 61
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFL 330
GM G L+V ++ G +V SG K + +K + +PFL
Sbjct: 62 GMIYGT----LQV----------SSRGAQVT---SGYLKDMTGTIK-----VVWYRMPFL 99
Query: 331 KSIEGKHKVGEFVCVSGKV---RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYP 387
++ + G+ V + G+V + +R H E+ K D L PIYP
Sbjct: 100 RNT---LQNGQIVILRGRVVTKKGVRVMEHPEIFSPADSYEKKLDTLQ--------PIYP 148
Query: 388 SKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA 447
GL + + + +AL+ L + +P + ++ L + GIH PK E A
Sbjct: 149 LTAGLTNNAVMKAVRQALEYLELQKEILPATVRMKYHLAEYNFSVRGIHFPKEKQEFYQA 208
Query: 448 RKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRA 507
R+RL+F+EF L L QM K +K R + S + L+
Sbjct: 209 RERLVFEEFLVFILS-LRQM---------------KEKKERSRNQFPIHPSEEIEAFLKK 252
Query: 508 LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMV 567
LPY LT++Q ++ D+ M RL+QGDVG GKT++A L+ M V G+Q A M
Sbjct: 253 LPYELTNAQKKVWEQLQKDMAGTHTMARLIQGDVGSGKTIIAVLSFMSVAFCGWQGAMMA 312
Query: 568 PTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTH 627
PTE+LA QH++ + ++ + E K+ LLTGS K+ R+ +++G +++GTH
Sbjct: 313 PTEVLARQHFDSITEMFEQYE---IPLKVELLTGSMTAKEKRLAYGRIESGQAQIIVGTH 369
Query: 628 SLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMA 687
+LI EKV ++ L L + DEQ RFGV QR +F K
Sbjct: 370 ALIQEKVTYANLALVVTDEQHRFGVKQREQFAGK-----------------------GEL 406
Query: 688 PHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
PH+L MSATPIPRTLA+ LYGD+ ++ I +LP R+PIK +++
Sbjct: 407 PHILVMSATPIPRTLAIILYGDLDVSVIDELPANRLPIKNCVVD 450
>gi|225389053|ref|ZP_03758777.1| hypothetical protein CLOSTASPAR_02798 [Clostridium asparagiforme
DSM 15981]
gi|225044875|gb|EEG55121.1| hypothetical protein CLOSTASPAR_02798 [Clostridium asparagiforme
DSM 15981]
Length = 685
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 134/347 (38%), Positives = 182/347 (52%), Gaps = 42/347 (12%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
PIY GL + +ALQ + +P + + + L + A IH P E
Sbjct: 145 PIYGQTRGLGNKAIVKAQTQALQLRQMEREYMPATLRKRYELAEINYAVEHIHFPADQSE 204
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
ARKRL+FDEFF L +G + KE DK R P Y+ + +
Sbjct: 205 LLYARKRLVFDEFF----------LFLVGVRKLKEKRADK-RSP-----YVMEFREEVAR 248
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
ALPY LT +Q + E+ DL + MNRL+QGDVG GKT++A LA + +GYQ
Sbjct: 249 FQEALPYRLTGAQERTLREVFDDLSGGLVMNRLIQGDVGSGKTIIAVLALLMAACNGYQG 308
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A M PTE+LA QH+E + +L + + +K KP L+TGS K+ R+ + ++ + +V
Sbjct: 309 ALMAPTEVLAKQHFESITQLFETYKIEK-KP--VLVTGSMTAKEKRLAYEQIERHEADIV 365
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
IGTH+LI EKV + L L I DEQ RFGV QR +SK D
Sbjct: 366 IGTHALIQEKVHYDNLALVITDEQHRFGVGQRELLSSK-------------GGD------ 406
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
PHVL MSATPIPRTLA+ LYGD+ ++ I +LP GR PIK ++
Sbjct: 407 ----PHVLVMSATPIPRTLAIILYGDLDISVIDELPQGRQPIKNCVV 449
>gi|410697257|gb|AFV76325.1| ATP-dependent DNA helicase RecG [Thermus oshimai JL-2]
Length = 770
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 177/513 (34%), Positives = 254/513 (49%), Gaps = 92/513 (17%)
Query: 224 QLENCGFYTLRKLLHHFPRTYADLQN--AQIDLDDGQYFIFIGEIISSRGMKAGCSFSFL 281
+L G T+R +L +FPR Y D + L+DGQ KA S
Sbjct: 109 RLAELGLRTVRDVLLYFPRRYEDRRALPGVRYLEDGQ--------------KATLSVK-- 152
Query: 282 EVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKS-IEGKHKVG 340
++ E+ T G +V + + G R T + F ++ + + + G
Sbjct: 153 --VLSKELVKT-PKKGMTLVQVRAVDAW-----------GWRLTLVWFNQTWVLNQIQEG 198
Query: 341 EFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDT 400
+ V+GKVR Y ++ +DE SL + GR PIYP+K G+ + LR T
Sbjct: 199 ASLIVTGKVRRQGGVQLY------VEHFEDEGTESL-STGRIVPIYPAKEGVGQAFLRRT 251
Query: 401 IARALQ-ALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARK--RLIFDEFF 457
+ RAL+ ALP DP+ +E GL+ A IH P+ DE +LAR RL FDE+
Sbjct: 252 VHRALEKALPLE-DPL-SAYREEHGLMDFSFALKAIHFPE--DERELARALLRLKFDEYL 307
Query: 458 YLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQL 517
L+L G L R R+ A++E + +ALP+ LT +Q
Sbjct: 308 LLEL-----------KALLDAGGLVLGRAFRVEEAWVEAFR-------KALPFPLTRAQE 349
Query: 518 SAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHY 577
+ EI D++ P M RLLQGDVG GKTVVA A +G Q A M PTE+LA QHY
Sbjct: 350 RVMGEIAKDMQSPRQMARLLQGDVGSGKTVVAAFALFLAAKNGAQGALMAPTEILARQHY 409
Query: 578 EHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFS 637
E+LL+ L + K+ LL GS ++ R + + L++G+ + +GTH+LI E V F
Sbjct: 410 ENLLRYLFPL-----GVKVELLLGSMGERERRGVLERLKSGEAQVAVGTHALIQEGVGFR 464
Query: 638 ALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATP 697
L LA+VDE+ RFGV+QR A++ P P VL MSATP
Sbjct: 465 DLGLAVVDEEHRFGVLQR---------------RALLKMAQHP-------PDVLVMSATP 502
Query: 698 IPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
IPR+LAL LYGD+ ++ + ++PPGR P+KT ++
Sbjct: 503 IPRSLALTLYGDLEVSVLDEMPPGRKPVKTKVL 535
>gi|398818301|ref|ZP_10576893.1| ATP-dependent DNA helicase RecG [Brevibacillus sp. BC25]
gi|398028069|gb|EJL21593.1| ATP-dependent DNA helicase RecG [Brevibacillus sp. BC25]
Length = 684
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 135/350 (38%), Positives = 193/350 (55%), Gaps = 44/350 (12%)
Query: 379 KGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQ 437
+G P+YP G + +LLR TI AL+ + P +I + + L+ +A+ IH
Sbjct: 141 RGELAPVYPLGGDVTHTLLRKTIQLALRQYGKEIPEILPADIVERYRLMPRINAFHSIHF 200
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGW 497
P++ ++ AR+R++F+E F QL Q L + Q + EG+ A ME
Sbjct: 201 PENAEDGRQARRRIMFEELFLFQLK--MQTLRKINRQ-QTEGVA--------LAIPMEE- 248
Query: 498 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
++ ++ LP+ LT +Q + EI+ D++ MNRLLQGDVG GKTVVA +A + +
Sbjct: 249 ---VREFVKGLPFPLTDAQKRVVKEILDDMRASHSMNRLLQGDVGSGKTVVAAIALIAAV 305
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
+GYQ A MVPTE+LA QH + L KLL N + ++ALL+GS K+ R + LQ
Sbjct: 306 KAGYQGALMVPTEILAEQHVQSLTKLLSN-----YGIQVALLSGSLTAKRRREVIGSLQM 360
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
G I +V+GTH+LI E V FS L L I DEQ RFGV QR +K
Sbjct: 361 GLIDVVVGTHALIQEDVFFSRLGLVITDEQHRFGVEQRRILRNK---------------- 404
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
++P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI+T
Sbjct: 405 -------GLSPDVLFMTATPIPRTLAITAFGDMDVSTIDQMPAGRKPIET 447
>gi|342164304|ref|YP_004768943.1| ATP-dependent DNA helicase RecG [Streptococcus pseudopneumoniae
IS7493]
gi|341934186|gb|AEL11083.1| ATP-dependent DNA helicase RecG [Streptococcus pseudopneumoniae
IS7493]
Length = 671
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 161/532 (30%), Positives = 253/532 (47%), Gaps = 99/532 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKD-EDDLSLRAKGRP 382
F + P+L K ++G + V GK +++ + VL EDDL
Sbjct: 94 FFNQPYLVD---KIELGATLAVFGKWERAKASL------TGMKVLAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ L+ L ++ +G + + WS
Sbjct: 197 LAEYKQALRRIKFEELFYFQM-----QLQTLKSENRVQG-----------SGLVLNWSQE 240
Query: 501 TKKLLRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
+++ LP+SLT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +
Sbjct: 241 KVTVVKENLPFSLTPAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTA 300
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
GYQ+A MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+
Sbjct: 301 GYQSALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGE 353
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 354 ADLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN- 398
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 --------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|422877058|ref|ZP_16923528.1| DNA helicase RecG [Streptococcus sanguinis SK1056]
gi|332360531|gb|EGJ38341.1| DNA helicase RecG [Streptococcus sanguinis SK1056]
Length = 671
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 158/530 (29%), Positives = 256/530 (48%), Gaps = 95/530 (17%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + ++ +PG+ + + G TL+ LL +FP Y D ++ + DL+DG+ + G+
Sbjct: 3 LHQPLTVLPGVGPKSAEKFAKLGLETLQDLLLYFPFRYEDFKSKNVLDLEDGEKAVVSGQ 62
Query: 266 IISSRGMKA-GCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
+++ ++ G + L + G+ + ++ F
Sbjct: 63 VVTPANVQYYGYKRNRLRFTI---------KQGEVALAVN-------------------F 94
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY 383
+ P+L K +VG + V GK +A S ++ + + EDDL
Sbjct: 95 FNQPYLAD---KIEVGANIAVFGKWDKAKASLTGMKL------LAQVEDDLQ-------- 137
Query: 384 PIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHI 441
P+Y G++ + L I A Q L + +P+ + + + L+ +A +H PK +
Sbjct: 138 PVYRLAQGISQASLVKLIKTAFDQGLDMLLEENLPQPLLERYQLVSRVEAVRAMHFPKDL 197
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
+ A +R+ F+E FY Q+ Q + +L + K N ++
Sbjct: 198 ADYKQALRRVKFEELFYFQM------------QLQ---VLKRETKAVSNGLKIDWQLDAV 242
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
+ ++LP+ LTS+Q +++EI+ DL+ P MNRLLQGDVG GKTVVA LA V +G+
Sbjct: 243 AEKKQSLPFELTSAQERSLTEILQDLRSPGHMNRLLQGDVGSGKTVVAGLAMYAVYTAGF 302
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q+A MVPTE+LA QH+++L +L + K+ALLTG + R I ++ G +
Sbjct: 303 QSALMVPTEILAEQHFDNLAQLFPEL-------KLALLTGGMKAAERRAILSAIENGQVD 355
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+++GTH+LI E V + AL L I+DEQ RFGV QR K D
Sbjct: 356 MIVGTHALIQEGVRYHALGLVIIDEQHRFGVEQRRILREK--------------GDN--- 398
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T ++
Sbjct: 399 ------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIITRWVK 442
>gi|153855287|ref|ZP_01996453.1| hypothetical protein DORLON_02467 [Dorea longicatena DSM 13814]
gi|149752286|gb|EDM62217.1| ATP-dependent DNA helicase RecG [Dorea longicatena DSM 13814]
Length = 677
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 134/359 (37%), Positives = 184/359 (51%), Gaps = 51/359 (14%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
P+Y GL+ +++ + +AL L + +P + ++GL A GIH P+ +
Sbjct: 147 PVYGLTAGLSNNMVMKAMKQALDGLDLTREILPDSLRLKYGLAEYNYAVRGIHFPEDKEV 206
Query: 444 ADLARKRLIFDEF--FYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
AR+RL+F+EF F L + RL K + RL+ Y
Sbjct: 207 FYHARERLVFEEFLEFILSIRRL------------------KEKNERLDNNYPMQSRPEV 248
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
+K L LP+ LT +Q EI DL M+RL+QGDVG GKT+VA LA M +GY
Sbjct: 249 QKFLENLPFELTGAQQKVWKEIEKDLGSDKTMSRLVQGDVGSGKTIVAVLALMNAAFNGY 308
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKP-KIALLTGSTPVKQSRMIRKDLQTGDI 620
Q A M PTE+LA QHYE++ K+ ED P K+ LLTGS K+ R ++ G
Sbjct: 309 QGAMMAPTEVLARQHYENITKMF----EDYDIPIKVELLTGSMTAKEKRRAYDRIECGLA 364
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
++IGTH+LI V + L L I DEQ RFGV QR F ++ G
Sbjct: 365 KIIIGTHALIQGAVSYDNLGLVITDEQHRFGVKQRETF-------ALKGG---------- 407
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYEN 739
PHVL MSATPIPRTLA+ LYGD+ ++ I +LP R+PIK ++ + GY N
Sbjct: 408 ------EPHVLVMSATPIPRTLAIILYGDLDISVIDELPANRLPIKNCVV---DTGYRN 457
>gi|399526679|ref|ZP_10766435.1| putative ATP-dependent DNA helicase RecG [Actinomyces sp. ICM39]
gi|398362788|gb|EJN46461.1| putative ATP-dependent DNA helicase RecG [Actinomyces sp. ICM39]
Length = 715
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 139/425 (32%), Positives = 210/425 (49%), Gaps = 47/425 (11%)
Query: 317 KFFRGTRFTSIPF-LKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLS 375
+F T F + L IE G+ +GKV A R ++ + + + ED
Sbjct: 91 QFLSATFFAKNQYKLAPIERILTPGQSFLFAGKVGAYRGK--LQLTHPSFEGVDGED--I 146
Query: 376 LRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANF--DPVPKEITQEFGLLCLFDAYM 433
R RP PIYP+ G L + + + L L + D VP ++ + +
Sbjct: 147 ERIASRPIPIYPATGSLASWAIARAVGMVLDQLDDSDVPDAVPAQVRERVRIPAHAQCLR 206
Query: 434 GIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAY 493
+HQP+ ++ AR+ L F E F LQ+G L + R R A
Sbjct: 207 RLHQPETDEDYQQARRALAFTEAFVLQVG-----------------LAMRRRGARATPAV 249
Query: 494 MEGWSS-LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLA 552
SS L + +LP+ LT SQ A+++I DL++ +PM RLLQGDVG GKTVVA ++
Sbjct: 250 SSPHSSPLLDRFRDSLPFQLTDSQKDAVAQISADLEREIPMQRLLQGDVGSGKTVVALMS 309
Query: 553 CMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIR 612
++V+ +G+Q A + PTE+LA QH L LL + E+ P + LLTGST R I+
Sbjct: 310 FLQVVAAGHQGALVAPTEVLAEQHTASLRALLAPLGEE--APDVRLLTGSTTPAARREIQ 367
Query: 613 KDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMA 672
+ + + +V+GTH+L E V F+ L L +VDEQ RFGV QR + +
Sbjct: 368 AAMNSAEPLIVVGTHALFQESVRFADLALVVVDEQHRFGVEQR-------------AALR 414
Query: 673 MVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEG 732
DG H L M+ATPIPRT+A+ ++GD+ T+++ +P GR P+ TY+ +
Sbjct: 415 RAREDGR-------GVHELVMTATPIPRTIAMTVFGDLDETRMSGMPKGRTPVATYLADA 467
Query: 733 NEKGY 737
+
Sbjct: 468 ANAAW 472
>gi|332981575|ref|YP_004463016.1| ATP-dependent DNA helicase RecG [Mahella australiensis 50-1 BON]
gi|332699253|gb|AEE96194.1| ATP-dependent DNA helicase RecG [Mahella australiensis 50-1 BON]
Length = 691
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/353 (34%), Positives = 190/353 (53%), Gaps = 54/353 (15%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHID 442
PIYPS ++ +LR+ + L+ + ++ +P E+ + + L + A IH P +
Sbjct: 150 PIYPSTADMSQKILRNIVKNVLELVKGQWEEYLPIELRKRYDLAEINFAINNIHFPVNAR 209
Query: 443 EADLARKRLIFDEFFYLQLGRLYQM-----LEGLGTQFEKEGLLDKYRKPRLNAAYMEGW 497
++AR+RL FDE F +QLG Y + ++ +G F R++ +E +
Sbjct: 210 SLNIARRRLAFDELFCMQLG-FYSIKGKNDVQKVGAPF------------RIHDIGLEAF 256
Query: 498 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
+R LP++LT +Q + EI+ D+ PMNRL+QGDVGCGKT++A LA
Sbjct: 257 -------IRRLPFALTGAQQRVLDEILADMSNTRPMNRLVQGDVGCGKTILAVLALYVAA 309
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
+ YQ A M PTE+LA QH++ L K D + IALL+G+ + + + ++
Sbjct: 310 SNCYQGAMMAPTEVLAQQHFQTLQKFFDG-----YDISIALLSGNMGENKKNEVLEAIKD 364
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
G I +V+GTH++I + VEF L L I DEQ RFGV QR A++
Sbjct: 365 GRIDVVVGTHAVIQDNVEFHRLGLVITDEQHRFGVRQR----------------AVLEKK 408
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
G PHVL MSATPIPR++AL YGD+ ++ + ++PPGR ++T+ I
Sbjct: 409 GG-------NPHVLVMSATPIPRSMALIFYGDLDVSIVDEMPPGRQQVETFFI 454
>gi|345882122|ref|ZP_08833628.1| ATP-dependent DNA helicase RecG [Prevotella oulorum F0390]
gi|343918085|gb|EGV28855.1| ATP-dependent DNA helicase RecG [Prevotella oulorum F0390]
Length = 700
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 133/369 (36%), Positives = 196/369 (53%), Gaps = 53/369 (14%)
Query: 368 LKDEDDLSLRAKG-RPYPIYPSK---GGLNA----SLLRDTIARALQ-ALPANFDPVPKE 418
+++ L L G +PY I + GG+ + L + IAR Q +LP P
Sbjct: 135 IEEATTLQLNEMGMQPYYITTERMKNGGITSRAIEKLTKTLIARLPQGSLPETLPPF--- 191
Query: 419 ITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKE 478
ITQ LL A+ GIH P +DE A+ RL F+E FY+QL L ++
Sbjct: 192 ITQPLHLLSREAAFHGIHYPHSLDELQRAQVRLKFEELFYVQLNILR-------YAHDRR 244
Query: 479 GLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQ 538
YR ++ + + + + LP++LT +Q + EI D+ MNRLLQ
Sbjct: 245 RKYSGYRFHQVGQVFHQFYEN-------NLPFALTGAQKRVMHEIRADMDSGKQMNRLLQ 297
Query: 539 GDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIAL 598
GDVG GKT+VA + + IG+G+QA M PTE+LA QH+ + + L +M + +AL
Sbjct: 298 GDVGSGKTLVALMTMLIAIGNGFQACIMAPTEILAEQHFVTIKEFLHDMPVE-----VAL 352
Query: 599 LTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRF 658
LTG K+ + + + L G+I +++GTH++I + V+F+ L LA+VDEQ RFGV QR R
Sbjct: 353 LTGVVKGKRRQTLLERLAKGEINILVGTHAVIEDTVQFARLGLAVVDEQHRFGVAQRARL 412
Query: 659 NSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDL 718
+K PH+L M+ATPIPRTLA+ +YGD+ ++ I +L
Sbjct: 413 WAK----------------------SEQPPHILVMTATPIPRTLAMTIYGDLEVSVIDEL 450
Query: 719 PPGRIPIKT 727
PPGR PI+T
Sbjct: 451 PPGRKPIET 459
>gi|301299276|ref|ZP_07205562.1| ATP-dependent DNA helicase RecG [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300853120|gb|EFK80718.1| ATP-dependent DNA helicase RecG [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 676
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 131/361 (36%), Positives = 193/361 (53%), Gaps = 49/361 (13%)
Query: 385 IYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
+Y S + S+++ + +A + + D VP+ I ++ L +H P E
Sbjct: 139 VYRSSKDIKESVVKQLVKQAYEEYNSYIRDVVPESIRIKYHLENRKQMIHDMHFPSTKKE 198
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
ADLAR+ IFDEFF + G Q+L+ + GL KY +L K+
Sbjct: 199 ADLARRSAIFDEFFSFEAG--LQLLKR--DNHKNMGLRIKYNNEKL------------KE 242
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
++ LP+ LT +Q ++EI D+ P MNRLLQGDVG GKT++A +A + +G+QA
Sbjct: 243 FIKGLPFELTKAQKRVVNEICADMLSPNHMNRLLQGDVGSGKTIIAAIAMYATVTAGFQA 302
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGS--TPVKQSRMIRKDLQTGDIT 621
M PTE+LA QH E L L +++ +AL+T S + VK R + K L+ GDI
Sbjct: 303 VLMAPTEILAQQHAEKLANLF-----EQYGISVALMTSSSLSRVKVKRELLKHLKNGDID 357
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+VIGTH++I + +EF L LAI DEQ RFGV QR K
Sbjct: 358 IVIGTHAVIQDNIEFHNLGLAITDEQHRFGVNQRRILRKK-------------------- 397
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVY 741
+ P +LAM+ATPIPRTLA+ YG+M ++ I +LP GR P+KT ++ +K +NV+
Sbjct: 398 ---GVNPEILAMTATPIPRTLAITTYGEMDVSIIDELPKGRQPVKTSWVK--KKQVKNVF 452
Query: 742 K 742
+
Sbjct: 453 E 453
>gi|226949848|ref|YP_002804939.1| ATP-dependent DNA helicase RecG [Clostridium botulinum A2 str.
Kyoto]
gi|226841536|gb|ACO84202.1| ATP-dependent DNA helicase RecG [Clostridium botulinum A2 str.
Kyoto]
Length = 679
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 163/526 (30%), Positives = 251/526 (47%), Gaps = 92/526 (17%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
I+ + G+ + QLE C + + LL +FPR Y + N D +++S +
Sbjct: 7 ITTLKGVGPKTKEQLEKCMIFNIMDLLLYFPRDYEFIDNYSKD-----------KLLSKK 55
Query: 271 GMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFL 330
++V V D T +G + I I+ +K G+ F P++
Sbjct: 56 --------VIIKVRVENIKRDIRTRTGKILTTI-------IFNDGEKAIVGSWFNQ-PYI 99
Query: 331 KSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKG 390
K+ K+GE + G ++ R N + N +LK++ + + + P YP KG
Sbjct: 100 KNY---FKIGEEYVLQGSLKEYRGN----LTINNAQILKNKCAEEVEER-KIIPKYPLKG 151
Query: 391 GLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKR 450
L +LL + L + + +P + +++ L L + IH+P++ E + + +R
Sbjct: 152 DLKNNLLIKLVDSVLTNIDIG-ENLPIWLIEKYKFLSLDKSIRTIHKPENQKELEESIRR 210
Query: 451 LIFDEF--FYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK----L 504
L F E + L++ L + LE EG S + + L
Sbjct: 211 LKFQELLAYCLKIAFLKEYLE----------------------TATEGISFIVSEEINNL 248
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
+ LP+ LT++Q + EI D ++ PMNRLLQGDVG GKT++A ++ VI +GYQ
Sbjct: 249 IEVLPFKLTNAQNKVLQEIFKDQEKEKPMNRLLQGDVGSGKTIIALISLFNVIKNGYQGV 308
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
+ PTE+LA QHYE LKL + + I LL GS V + I++ L+ G I L+I
Sbjct: 309 MLAPTEILAVQHYEEALKLFKDFNLN-----IELLIGSIKVSSKKEIKEKLKEGKIDLII 363
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+LI + VEF L + I DEQ RFGV+QR + M+N S
Sbjct: 364 GTHALIEDDVEFYNLGMVITDEQHRFGVMQRSK---------------MLNKGKS----- 403
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
L MSATPIPR+L L+LYGD+ L+ I +LPPGR I TY +
Sbjct: 404 ---VDTLVMSATPIPRSLTLSLYGDLDLSIIDELPPGRQKIDTYYV 446
>gi|417934698|ref|ZP_12578018.1| ATP-dependent DNA helicase RecG [Streptococcus mitis bv. 2 str.
F0392]
gi|340771268|gb|EGR93783.1| ATP-dependent DNA helicase RecG [Streptococcus mitis bv. 2 str.
F0392]
Length = 671
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 165/533 (30%), Positives = 255/533 (47%), Gaps = 101/533 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ DL+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLDLEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ S L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQSGLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSS- 499
+ E A +R+ F+E FY Q+ L+ L ++ +G + + WS
Sbjct: 197 LTEYKQALRRIKFEELFYFQM-----QLQTLKSENRVQG-----------SGLVLNWSED 240
Query: 500 -LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
LT+ + LP+ LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA +
Sbjct: 241 DLTR-VKENLPFPLTQAQEKSLREILADMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVT 299
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+GYQAA MVPTE+LA QH+E L L ++ K+ALLTGS V + R + + + G
Sbjct: 300 AGYQAALMVPTEILAEQHFESLQSLFPDL-------KLALLTGSLKVAEKREVLETIAKG 352
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+ L+IGTH+LI + V+++ L L I+DEQ RFGV QR K D
Sbjct: 353 EADLIIGTHALIQDGVDYARLGLIIIDEQHRFGVGQRRILREK--------------GDN 398
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 ---------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|322377446|ref|ZP_08051937.1| ATP-dependent DNA helicase RecG [Streptococcus sp. M334]
gi|321281646|gb|EFX58655.1| ATP-dependent DNA helicase RecG [Streptococcus sp. M334]
Length = 671
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 162/532 (30%), Positives = 255/532 (47%), Gaps = 99/532 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ L+ L ++ +G + + WS
Sbjct: 197 LAEYKQALRRIKFEELFYFQM-----QLQTLKSENRVQG-----------SGLVLNWSQE 240
Query: 501 TKKLLRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
++A LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +
Sbjct: 241 KVTAVKASLPFALTPAQEKSLQEILTDMKSDYHMNRLLQGDVGSGKTVVAGLAMFAAVTA 300
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
GYQAA MVPTE+LA QH+E L L ++ K+ALLTGS V + R + + + G+
Sbjct: 301 GYQAALMVPTEILAEQHFESLQGLFPDL-------KLALLTGSLKVAEKREVLETIAKGE 353
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
L+IGTH+LI + V+++ L L I+DEQ RFGV QR K D
Sbjct: 354 SDLIIGTHALIQDGVDYARLGLIIIDEQHRFGVGQRRVLREK--------------GDN- 398
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 --------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|226313294|ref|YP_002773188.1| ATP-dependent DNA helicase RecG [Brevibacillus brevis NBRC 100599]
gi|226096242|dbj|BAH44684.1| ATP-dependent DNA helicase [Brevibacillus brevis NBRC 100599]
Length = 684
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 135/350 (38%), Positives = 193/350 (55%), Gaps = 44/350 (12%)
Query: 379 KGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQ 437
+G P+YP G + +LLR TI AL+ + P +I + + L+ A+ IH
Sbjct: 141 RGELAPVYPLGGDVTHTLLRKTIQLALRQYGKEIPEILPADIVERYRLMPRIHAFHSIHF 200
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGW 497
P++ ++ AR+R++F+E F QL Q L + Q + EG+ A ME
Sbjct: 201 PENAEDGRQARRRIMFEELFLFQLK--MQTLRKINRQ-QTEGVA--------LAIPMEE- 248
Query: 498 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
++ ++ LP+ LT +Q + EI+ D++ P MNRLLQGDVG GKTVVA +A + +
Sbjct: 249 ---VREFVKGLPFPLTDAQKRVVKEILDDMRAPHAMNRLLQGDVGSGKTVVAAIALIAAV 305
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
+GYQ A MVPTE+LA QH + L KLL + + ++ALL+GS K+ R + LQ
Sbjct: 306 KAGYQGALMVPTEILAEQHVQSLTKLLSD-----YGIQVALLSGSLTAKRRREVIGSLQM 360
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
G I +V+GTH+LI E V FS L L I DEQ RFGV QR +K
Sbjct: 361 GLIDVVVGTHALIQEDVFFSRLGLVITDEQHRFGVEQRRILRNK---------------- 404
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
++P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI+T
Sbjct: 405 -------GLSPDVLFMTATPIPRTLAITAFGDMDVSTIDQMPAGRKPIET 447
>gi|328947379|ref|YP_004364716.1| ATP-dependent DNA helicase RecG [Treponema succinifaciens DSM 2489]
gi|328447703|gb|AEB13419.1| ATP-dependent DNA helicase RecG [Treponema succinifaciens DSM 2489]
Length = 728
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 136/392 (34%), Positives = 206/392 (52%), Gaps = 55/392 (14%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHID 442
PIYP GL + R T+A+AL+ N + +P +I +E LL +A + +HQP+ ++
Sbjct: 156 PIYPLTEGLTQKVYRKTVAQALKQYAKNISNEIPDKIIKERNLLNKSEAILFVHQPQTLN 215
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKY---RKP-------RLNAA 492
+A ARK LI++E + + L + L GT ++ + + Y P ++
Sbjct: 216 QAQEARKTLIYEELYLFEYKMLERALMHRGTLPLQDFVPEAYPYFSTPDSETGLEQIRNE 275
Query: 493 YMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDL------------------KQPVPMN 534
+ + S K++ +L + LT Q+++I E+ D+ K P M
Sbjct: 276 FQKSLSPRQKQIFSSLNFELTLDQMNSILEMNRDIDKSQTECNTMLNAPQKLSKPPFSMQ 335
Query: 535 RLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKP 594
RLLQGDVG GKT+V+F C I G Q A + PTELLA QH E+ KLL +
Sbjct: 336 RLLQGDVGSGKTLVSFFVCARTIDYGGQCAILAPTELLARQHAENAAKLL-----EPAGI 390
Query: 595 KIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQ 654
K A LTG+ + + L+ G+I +VIGTH+L + ++ L+LA++DEQ RFGV Q
Sbjct: 391 KTAFLTGNLKASGRQSLLNALRDGNIDIVIGTHALFSRNTQYKNLQLAVIDEQHRFGVTQ 450
Query: 655 RGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMA--PHVLAMSATPIPRTLALALYGDMSL 712
R SK + +HMA P +L MSATPIP+TLAL +GD+ +
Sbjct: 451 RESIISKGRISF-----------------KHMAHSPDLLMMSATPIPQTLALTAFGDLDI 493
Query: 713 TQITDLPPGRIPIKTYI-IEGNEKG-YENVYK 742
+ I +P GR+P+KTY+ + GNE+ YE + K
Sbjct: 494 SVIKTMPKGRLPVKTYLTVFGNERNVYEAIRK 525
>gi|383938317|ref|ZP_09991531.1| ATP-dependent DNA helicase RecG [Streptococcus pseudopneumoniae
SK674]
gi|383714810|gb|EID70802.1| ATP-dependent DNA helicase RecG [Streptococcus pseudopneumoniae
SK674]
Length = 671
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 162/532 (30%), Positives = 254/532 (47%), Gaps = 99/532 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ R + G L+ LL +FP Y D + Q+ DL+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPRSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLDLEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ L+ L ++ +G + + WS
Sbjct: 197 LAEYKQALRRIKFEELFYFQM-----QLQTLKSENRVQG-----------SGLVLNWSQE 240
Query: 501 TKKLLRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
+++ LP+SLT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +
Sbjct: 241 KVTVVKENLPFSLTPAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTA 300
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
GYQ+A MVPTE+LA QH+E L L ++ K+ALLTGS + R + + + G+
Sbjct: 301 GYQSALMVPTEILAEQHFESLQSLFPDL-------KLALLTGSLKAAEKREVLETIAKGE 353
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
L+IGTH+LI + V+++ L L I+DEQ RFGV QR K D
Sbjct: 354 ADLIIGTHALIQDGVDYARLGLIIIDEQHRFGVGQRRILREK--------------GDN- 398
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 --------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|422879467|ref|ZP_16925933.1| DNA helicase RecG [Streptococcus sanguinis SK1059]
gi|422929313|ref|ZP_16962255.1| DNA helicase RecG [Streptococcus sanguinis ATCC 29667]
gi|422932284|ref|ZP_16965215.1| DNA helicase RecG [Streptococcus sanguinis SK340]
gi|332365660|gb|EGJ43418.1| DNA helicase RecG [Streptococcus sanguinis SK1059]
gi|339615129|gb|EGQ19812.1| DNA helicase RecG [Streptococcus sanguinis ATCC 29667]
gi|339619068|gb|EGQ23658.1| DNA helicase RecG [Streptococcus sanguinis SK340]
Length = 671
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 158/530 (29%), Positives = 255/530 (48%), Gaps = 95/530 (17%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + ++ +PG+ + + G TL+ LL +FP Y D ++ + DL+DG+ + G+
Sbjct: 3 LHQPLTVLPGVGPKSAEKFTKLGLETLQDLLLYFPFRYEDFKSKNVLDLEDGEKAVVSGQ 62
Query: 266 IISSRGMKA-GCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
+++ ++ G + L + G+ + ++ F
Sbjct: 63 VVTPANVQYYGYKRNRLRFTI---------KQGEVALAVN-------------------F 94
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY 383
+ P+L K +VG + V GK +A S ++ + + EDDL
Sbjct: 95 FNQPYLAD---KIEVGANIAVFGKWDKAKASLTGMKL------LAQVEDDLQ-------- 137
Query: 384 PIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHI 441
P+Y G++ + L I A Q L + +P+ + + + L+ +A +H PK +
Sbjct: 138 PVYRLAQGISQANLVKLIKTAFDQGLDLLLEENLPQSLLERYQLVSRVEAVRAMHFPKDL 197
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
+ A +R+ F+E FY Q+ Q + +L + K N ++ S
Sbjct: 198 ADYKQALRRVKFEELFYFQM------------QLQ---VLKRETKAVSNGLKIDWQSDAV 242
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
+ ++LP+ LTS+Q +++EI+ DL+ P MNRLLQGDVG GKTVVA LA V +G+
Sbjct: 243 AEKKQSLPFELTSAQERSLTEILQDLRSPGHMNRLLQGDVGSGKTVVAGLAMYAVYTAGF 302
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q+A MVPTE+LA QH++ L +L + K+ALLTG + R ++ G +
Sbjct: 303 QSALMVPTEILAEQHFDSLAQLFPEL-------KLALLTGGMKAAERRETLAAIENGQVD 355
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+++GTH+LI E V + AL L I+DEQ RFGV QR K D
Sbjct: 356 MIVGTHALIQEAVRYHALGLVIIDEQHRFGVEQRRILREK--------------GDN--- 398
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T ++
Sbjct: 399 ------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIITRWVK 442
>gi|365904210|ref|ZP_09441969.1| ATP-dependent DNA helicase RecG [Lactobacillus versmoldensis KCTC
3814]
Length = 679
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 160/528 (30%), Positives = 247/528 (46%), Gaps = 88/528 (16%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGE 265
L + +S + G+ + LE+ G ++ LL +FP Y D++ ++ Q I +
Sbjct: 3 LQEISVSTLSGVGPKRISALESLGIKSIYDLLFYFPFRYEDMEVKSLNDAVDQEKILLKG 62
Query: 266 IISSRGMKA--GCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTR 323
+++S + A G + L V + E T
Sbjct: 63 VVASDPVVAHFGYRKNRLNVRILVENESIMVT---------------------------- 94
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY 383
F + P+LK K + G V V GK + NH + I V+ D ++G
Sbjct: 95 FFNQPWLKD---KFETGNEVAVYGK----WNENHRALT--GIKVIGDS-----HSEGSID 140
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHID 442
+Y + L + I A + +P+ I Q++ L+ G+H P+ +
Sbjct: 141 SVYSVNKNIRQKTLVNMIKEAFDKYHQDIISVIPESIIQKYQLMHDEQMVKGMHFPQDEN 200
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
E + AR+ F EFF + G Q ++ Q E +GL++ Y + ++
Sbjct: 201 ENEAARRSAKFREFFLFECG--IQSVKARDNQ-ENDGLVESYNQEFID------------ 245
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
+ + LP+ T++Q I EI+ D++ MNRLLQGDVG GKT+VA A + + +G+Q
Sbjct: 246 QFIDKLPFKPTNAQSRVIKEILDDMQSKHHMNRLLQGDVGSGKTIVAVTAMLASVTAGFQ 305
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
AA M PTE+LA QH++ + LL + K K+ +LTGS K+ I +++ G I +
Sbjct: 306 AAIMAPTEILAQQHFDKISSLLTPL-----KLKVGILTGSQTKKEHDTIAENVAQGRINV 360
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
V+GTH+LI E V F L L ++DEQ RFGV QR K G+
Sbjct: 361 VVGTHALIQESVSFKDLGLIVIDEQHRFGVNQRKALRLK----------------GN--- 401
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
P VLAM+ATPIPRTLA+ YGDM +++I +LP GR PI TY I
Sbjct: 402 ----NPDVLAMTATPIPRTLAITTYGDMDVSRIDELPAGRKPIDTYWI 445
>gi|49474349|ref|YP_032391.1| ATP-dependent DNA helicase RecG [Bartonella quintana str. Toulouse]
gi|49239853|emb|CAF26247.1| ATP-dependent DNA helicase recG [Bartonella quintana str. Toulouse]
Length = 702
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 154/418 (36%), Positives = 207/418 (49%), Gaps = 64/418 (15%)
Query: 318 FFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLR 377
FF R P+LK + G+ V VSGKV R N M + D S +
Sbjct: 107 FFHAQR----PWLKK---QLPEGKKVIVSGKVE--RFNGQLSM------IHPDHIAPSEQ 151
Query: 378 AKGRPY--PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGI 435
+ P P+YPS GL+A LR TI AL+ +P + + + + ++ A I
Sbjct: 152 SNQMPLIEPVYPSTAGLSAKTLRRTIQNALEYIPLLPEWIEESVKKQQNFSSFSVALHRI 211
Query: 436 HQPKHIDEADL---ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAA 492
H P + D+ L ARKRL +DE QL LG L + + L+ A
Sbjct: 212 HTPINPDDLSLKSAARKRLAYDELLACQLA--------LG--------LVRLKTKSLSGA 255
Query: 493 YMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLA 552
+ TKKLL+ALP+ LT+ Q AI +I DL P PM RLLQGDVG GKTVVA +A
Sbjct: 256 SRPPKGTYTKKLLKALPFQLTNGQKKAIQDIANDLASPEPMLRLLQGDVGAGKTVVALMA 315
Query: 553 CMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIR 612
++ + Q+A M PTE+LA QH+ + L +K + LLTG K I
Sbjct: 316 SAQIAENSGQSALMAPTEVLARQHFATIAPL-----AEKIGLQTVLLTGREKGKLRANIL 370
Query: 613 KDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMA 672
KD +G +++IGTH+LI V + L L I+DEQ RFGV QR +K
Sbjct: 371 KDTLSGQASIIIGTHALIQNNVAYKNLALTIIDEQHRFGVHQRLALTAK----------- 419
Query: 673 MVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
G+ P +L M+ATPIPRTL L +GDM ++QIT+ P GR PI T I+
Sbjct: 420 -----GN-------KPDMLVMTATPIPRTLVLTAFGDMDISQITEKPTGRQPITTAIL 465
>gi|411004912|ref|ZP_11381241.1| ATP-dependent DNA helicase RecG [Streptomyces globisporus C-1027]
Length = 737
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 152/531 (28%), Positives = 237/531 (44%), Gaps = 92/531 (17%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQ--NAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEV 283
E+ +T+ LLHH+PR Y + A DL ++ + ++ +R
Sbjct: 25 EHLDLHTVGDLLHHYPRRYEERGKLTALADLPLDEHVTVVAQVADAR------------- 71
Query: 284 IVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKV---G 340
++ ++G+ K++ + L R + F + HK G
Sbjct: 72 ----------------ILMFNNGRGKRLEVTLTDG--SGRLQLVFFGHGVHKPHKELLPG 113
Query: 341 EFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAK---GRPYPIYPSKGGLNASLL 397
+GKV Y + D D+ + GR PIYP+ L++ +
Sbjct: 114 RQAMFAGKVSVFNRKMQLAHPTYQLLDASDADEATEAVDAFAGRLLPIYPACKQLDSWRI 173
Query: 398 RDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFF 457
+ L + DP+P + + G L +A + +H+P+ + + A+ RL +DE F
Sbjct: 174 AKAVDAVLPSAQDAVDPLPAALREGRGFTPLPEALLKVHRPQTKADIEDAKARLKWDEAF 233
Query: 458 YLQLG---RLY--QMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSL 512
LQ+ R Y L + +GLLD + LP++L
Sbjct: 234 VLQVALARRRYADTQLPAAARRPVADGLLDAFDA--------------------KLPFTL 273
Query: 513 TSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELL 572
T Q EI DL PM+RLLQG+VG GKT+VA A + V+ +G QAA + PTE+L
Sbjct: 274 TEGQEKVSKEIFDDLATEHPMHRLLQGEVGSGKTMVALRAMLTVVDAGGQAAMLAPTEVL 333
Query: 573 ATQHYEHLLKLLDNMEE------DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGT 626
A QH+ + +++ + E H K+ LLTGS R DL TG+ +VIGT
Sbjct: 334 AQQHHRSITEMMGELAEGGMLGGSDHGTKVVLLTGSMGTAARRQALLDLVTGEAGIVIGT 393
Query: 627 HSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHM 686
H+LI +KV+F L L +VDEQ RFGV QR SK
Sbjct: 394 HALIEDKVQFHDLGLVVVDEQHRFGVEQRDALRSK----------------------GKQ 431
Query: 687 APHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGY 737
PH+L M+ATPIPRT+A+ ++GD+ + + LP GR PI ++++ +K +
Sbjct: 432 PPHLLVMTATPIPRTVAMTVFGDLETSVLDQLPAGRSPIASHVVPAKDKPH 482
>gi|402487701|ref|ZP_10834519.1| ATP-dependent DNA helicase RecG [Rhizobium sp. CCGE 510]
gi|401813570|gb|EJT05914.1| ATP-dependent DNA helicase RecG [Rhizobium sp. CCGE 510]
Length = 701
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 150/443 (33%), Positives = 219/443 (49%), Gaps = 70/443 (15%)
Query: 305 SGQKKKIYLHLKK------FFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHY 358
S +++LH + FFRG +E + + V VSGKV N
Sbjct: 87 SNNPYRVFLHDETGELALVFFRGQ-------AAWLEKQLPIDTEVTVSGKVDWF--NGRV 137
Query: 359 EMREYNIDVLKDEDDLSLRAKGRPY--PIYPSKGGLNASLLRDTIARALQALPANFDPVP 416
M + V +E A+ P PIYP GL+ LR I AL P + +
Sbjct: 138 SMVHPDYIVRAEE------AENLPLVEPIYPLTAGLSPKTLRKIIDAALPRFPELPEWID 191
Query: 417 KEITQEFGLLCLFDAYMGIHQPKH---IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGT 473
+TQ GL + D++ +H+P+ ID AR+RL +DEF QL
Sbjct: 192 LALTQREGLPSIRDSFHMLHEPRDPADIDAQAPARRRLAYDEFLAGQLSLS--------- 242
Query: 474 QFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPM 533
L + R ++ A + ++ K+L++LP+SLTSSQ AI+E++ D+ + M
Sbjct: 243 -------LVRQRLRKMAAQPVHATGDISGKILKSLPFSLTSSQNEAIAEVLKDMARAERM 295
Query: 534 NRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHK 593
RLLQGDVG GKT+VA +A VI SG QA M PTE+LA QH+ + K +
Sbjct: 296 LRLLQGDVGSGKTLVALMAMAAVIESGGQAVLMAPTEILARQHHATISKFAASA-----G 350
Query: 594 PKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVV 653
I +LTG T ++ I + + +G ++IGTH+L + V ++ L LA+VDEQ RFGV
Sbjct: 351 LGIEILTGRTKGREREDILERIASGAAQIIIGTHALFQDSVTYAKLMLAVVDEQHRFGVH 410
Query: 654 QRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLT 713
QR R +K ++PH+L M+ATPIPRTL LA +GDM ++
Sbjct: 411 QRLRLTAK-----------------------GISPHMLVMTATPIPRTLVLAAFGDMDVS 447
Query: 714 QITDLPPGRIPIKTYIIEGNEKG 736
++T+ P GR PI+T + G
Sbjct: 448 KLTEKPAGRKPIQTITVPMERTG 470
>gi|400975062|ref|ZP_10802293.1| ATP-dependent DNA helicase RecG [Salinibacterium sp. PAMC 21357]
Length = 725
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 163/535 (30%), Positives = 242/535 (45%), Gaps = 78/535 (14%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQN----AQIDLDDGQYFIF 262
LD+ +S V G Q G T+ L+ H+PR YA AQ+ LD+ +
Sbjct: 6 LDQKLSAVLGGRTATSMQ-RGLGLQTVGDLMTHYPRRYARRGELTALAQLPLDEAVTIVA 64
Query: 263 IGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGT 322
+ +R M+ S LEV +I G + +R
Sbjct: 65 EVREVRNRPMR-NKRGSILEV------------------SISDGTGILTLTFFNQAWRAN 105
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNH--YEMREYNIDVLKDEDDLSLRAKG 380
+ P ++ I F G+ R R H YE+ + + LK + A+
Sbjct: 106 ELS--PGVRGI--------FAGKVGQYRGTRQLAHPDYELFDRDALELKKPEQAKSWAE- 154
Query: 381 RPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKH 440
+P PIYP+ + + ++ + L L DPVP + +E LL A IH+PK
Sbjct: 155 QPIPIYPATSTVASWQIQKAVEVVLDTLGPLDDPVPDAVRRERELLPFAKALEQIHRPKV 214
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ AR L F E F LQ LL + +K R + A SL
Sbjct: 215 DSDWRAARDALRFQEAFVLQ-----------------SALLQQRQKQRESEAIARTAGSL 257
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
+ ALP++LT Q + +I DL +PVPMNRL+QG+VG GKT+VA A + V SG
Sbjct: 258 LEGFDAALPFTLTGDQQTVGEQIFLDLAEPVPMNRLVQGEVGSGKTLVALRAMLAVAQSG 317
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
Q+A + PTE+LA QH+ +++ L + +P I +TG P + + +G
Sbjct: 318 GQSALLAPTEVLAHQHFRSIVRTLGPDLAAELRPTI--ITGQLPTAERKKALLATISGAS 375
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+VIGTH+L+ + V F L L +VDEQ RFGV QR K P
Sbjct: 376 RIVIGTHALLGDAVSFIDLGLVVVDEQHRFGVDQREALRLK---------------GAKP 420
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
PHVL ++ATPIPRT+A+ ++GD+ ++ I +LP GR PI ++++ EK
Sbjct: 421 -------PHVLVLTATPIPRTVAMTVFGDLDISSIAELPAGRQPISSHVVPLAEK 468
>gi|410667349|ref|YP_006919720.1| ATP-dependent DNA helicase RecG [Thermacetogenium phaeum DSM 12270]
gi|409105096|gb|AFV11221.1| ATP-dependent DNA helicase RecG [Thermacetogenium phaeum DSM 12270]
Length = 628
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 133/404 (32%), Positives = 206/404 (50%), Gaps = 53/404 (13%)
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRD 399
G + V+GKV + +Y I K+ + GR P+Y + G L+ LR
Sbjct: 58 GTPLMVTGKVEKTLYGYEISVVDYEIGNCKEPVHV-----GRLVPVYGTTGELSQRYLRR 112
Query: 400 TIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFY 458
I + + + D + E+ Q F L +A IH P+ + AR+RL+F+E F
Sbjct: 113 VIFQLVHKYASRVKDVLSPELRQRFNLYSASEALREIHFPRDAVSLERARERLVFEELFL 172
Query: 459 LQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLS 518
+ G L + ++G+ R PR + L K +++LP+ LT++Q
Sbjct: 173 FEAG-----LSKIRESLRRDGVA---RPPR---------TDLAKAFIKSLPFPLTAAQRR 215
Query: 519 AISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYE 578
I+E+ DL M RL+QGDVGCGKT+VA A + V+ +GYQ A M PTE+LA QHY
Sbjct: 216 VIAEVERDLLSTRRMYRLVQGDVGCGKTIVAIYALLSVVAAGYQGALMAPTEILAEQHYL 275
Query: 579 HLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSA 638
+ +++ + ++ LLTGS K+ L++G+I ++IGTH+L+ +V F
Sbjct: 276 GINRIVSPL-----GVRVGLLTGSLSKKEREQNLAGLRSGEIDIIIGTHALLEREVAFRD 330
Query: 639 LRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPI 698
L L ++DEQ RFGV QR SK +P VL M+ATPI
Sbjct: 331 LGLIVIDEQHRFGVQQRDLLLSK-----------------------AASPDVLVMTATPI 367
Query: 699 PRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYK 742
PR++ + +YGD+ ++ I +LP GR P+KTY + +E+ VY+
Sbjct: 368 PRSMTMTVYGDLDVSVIDELPAGRKPVKTYFLPASERS--RVYR 409
>gi|456388609|gb|EMF54049.1| ATP-dependent DNA helicase [Streptomyces bottropensis ATCC 25435]
Length = 738
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 155/556 (27%), Positives = 248/556 (44%), Gaps = 101/556 (18%)
Query: 211 ISCVPGLSKRLYHQL---------ENCGFYTLRKLLHHFPRTYADLQNAQI----DLDDG 257
+ VP L + L + L E+ G +T+ LLHH+PR Y + Q+ DL
Sbjct: 1 MDLVPALEEPLKNSLGAATAKVMAEHLGLHTVGDLLHHYPRRYE--ERGQLTHLADLPMD 58
Query: 258 QYFIFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK 317
++ + ++ +R L + + + + SG+ + ++
Sbjct: 59 EHVTVVAQVADAR----------LHTFASAKAPRGKGQRLEVTITDGSGRLQLVF----- 103
Query: 318 FFRGTRFTSIPFLKSIEGKHK---VGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDED-- 372
F + HK G +GKV N ++ ++L+ +D
Sbjct: 104 -----------FGHGVHKPHKDLLPGTRALFAGKVSVF--NRRLQLAHPAYELLRGDDVT 150
Query: 373 DLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAY 432
+ G PIYP+ L + + + L + DP+P+ + + GL+ L +A
Sbjct: 151 ETVDTWAGALIPIYPATAKLESWKIAKAVQTVLPSAQDAVDPLPESLREGRGLVSLAEAL 210
Query: 433 MGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQ-----MLEGLGTQFEKEGLLDKYRKP 487
+ IH+P + D AR RL +DE F LQ+ + L + + +GLL +
Sbjct: 211 LKIHRPHTKADRDSARDRLKWDEAFVLQVALARRRHADSQLPAVARRPAPDGLLTAFDA- 269
Query: 488 RLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTV 547
LP++LT Q EI DL PM+RLLQG+VG GKT+
Sbjct: 270 -------------------RLPFTLTDGQRKVSREIFDDLATEHPMHRLLQGEVGSGKTM 310
Query: 548 VAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEED------KHKPKIALLTG 601
VA A + V+ +G QAA + PTE+LA QH+ + +++ + + +H K+ LLTG
Sbjct: 311 VALRAMLAVVDAGGQAAMLAPTEVLAQQHHRSVTEMMGELAQGGMLGGVEHATKVVLLTG 370
Query: 602 STPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSK 661
S R DL TG+ +VIGTH+LI +KV+F L L +VDEQ RFGV QR K
Sbjct: 371 SMGAAARRQALLDLVTGEAGIVIGTHALIEDKVQFHDLGLVVVDEQHRFGVEQRDALRGK 430
Query: 662 LYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPG 721
PH+L M+ATPIPRT+A+ ++GD+ + + LP G
Sbjct: 431 ----------------------GKQPPHLLVMTATPIPRTVAMTVFGDLDTSVLDQLPAG 468
Query: 722 RIPIKTYIIEGNEKGY 737
R PI ++++ +K +
Sbjct: 469 RSPIASHVVPAADKPH 484
>gi|419519407|ref|ZP_14059013.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA08825]
gi|379641244|gb|EIA05782.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA08825]
Length = 662
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 162/525 (30%), Positives = 251/525 (47%), Gaps = 99/525 (18%)
Query: 214 VPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIISSRGM 272
+PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G++++ +
Sbjct: 1 MPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQVVTPASV 60
Query: 273 KAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTRFTSIPFL 330
+ + F ++ ++ LK+ F + P+L
Sbjct: 61 Q---YYGF--------------------------KRNRLRFSLKQGEVVFAVNFFNQPYL 91
Query: 331 KSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSK 389
K ++G + V GK RA S ++ + + EDDL P+Y
Sbjct: 92 AD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ--------PVYRLA 134
Query: 390 GGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA 447
G++ + L I A Q L + +P+ + ++ L+ A +H PK + E A
Sbjct: 135 QGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKDLAEYKQA 194
Query: 448 RKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRA 507
+R+ F+E FY Q+ L+ L ++ +G + + WS ++A
Sbjct: 195 LRRIKFEELFYFQM-----QLQTLKSENRVQG-----------SGLVLDWSQEKVTAVKA 238
Query: 508 -LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFM 566
LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +GYQAA M
Sbjct: 239 SLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTAGYQAALM 298
Query: 567 VPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGT 626
VPTE+LA QH+E L L N+ K+ALLTGS + R + + + G+ L+IGT
Sbjct: 299 VPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGEADLIIGT 351
Query: 627 HSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHM 686
H+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 352 HALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN-------- 389
Query: 687 APHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 390 -PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 433
>gi|422849273|ref|ZP_16895949.1| DNA helicase RecG [Streptococcus sanguinis SK115]
gi|325690294|gb|EGD32298.1| DNA helicase RecG [Streptococcus sanguinis SK115]
Length = 671
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 158/530 (29%), Positives = 255/530 (48%), Gaps = 95/530 (17%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + ++ +PG+ + + G TL+ LL +FP Y D ++ + DL+DG+ + G+
Sbjct: 3 LHQPLTVLPGVGPKSAEKFAKLGLETLQDLLLYFPFRYEDFKSKNVLDLEDGEKAVVSGQ 62
Query: 266 IISSRGMKA-GCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
+++ ++ G + L + G+ + ++ F
Sbjct: 63 VVTPANVQYYGYKRNRLRFTI---------KQGEVALAVN-------------------F 94
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY 383
+ P+L K +VG + V GK +A S ++ + + EDDL
Sbjct: 95 FNQPYLAD---KIEVGANIAVFGKWDKAKASLTGMKL------LAQVEDDLQ-------- 137
Query: 384 PIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHI 441
P+Y G++ + L I A Q L + +P+ + + + L+ +A +H PK +
Sbjct: 138 PVYRLAQGISQASLVKLIKTAFDQGLDLLLEENLPQLLLERYQLVSRVEAVRAMHFPKDL 197
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
+ A +R+ F+E FY Q+ Q + +L + K N ++ S
Sbjct: 198 ADYKQALRRVKFEELFYFQM------------QLQ---VLKRESKAVSNGLKIDWQSDAV 242
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
+ ++LP+ LTS+Q +++EI+ DL+ P MNRLLQGDVG GKTVVA LA V +G+
Sbjct: 243 AEKKKSLPFELTSAQERSLAEILQDLRSPGHMNRLLQGDVGSGKTVVAGLAMYAVYTAGF 302
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q+A MVPTE+LA QH++ L +L + K+ALLTG + R ++ G +
Sbjct: 303 QSALMVPTEILAEQHFDSLAQLFPEL-------KLALLTGGMKAAERRETLAAIENGQVD 355
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+++GTH+LI E V + AL L I+DEQ RFGV QR K D
Sbjct: 356 MIVGTHALIQEAVRYHALGLVIIDEQHRFGVEQRRILREK--------------GDN--- 398
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T ++
Sbjct: 399 ------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIITRWVK 442
>gi|443673528|ref|ZP_21138589.1| ATP-dependent DNA helicase [Rhodococcus sp. AW25M09]
gi|443413868|emb|CCQ16927.1| ATP-dependent DNA helicase [Rhodococcus sp. AW25M09]
Length = 758
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 129/363 (35%), Positives = 187/363 (51%), Gaps = 51/363 (14%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
PIYP+ + + + +AL L DP+P+ + +E GL+ + A +H P +
Sbjct: 180 PIYPATKDVESWTFMRCVRQALDQLDDVTDPLPESVRRERGLVDIDTALRSVHFPDTPQD 239
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAA-----YMEGWS 498
D AR+RL FDE +QL L D+ R +A +G
Sbjct: 240 KDAARERLKFDEALAVQLV-----------------LADRRRDASTRSAPRCPPITDG-- 280
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
+ + R LP+ LT+ Q +EI DL P PM+RLLQG+VG GKT+VA A ++VI
Sbjct: 281 -IAAEFDRRLPFELTAGQHDVAAEIANDLSAPHPMSRLLQGEVGSGKTIVALRAMLQVID 339
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNM----EEDKHK--PKIALLTGSTPVKQSRMIR 612
+G+Q A + PTE+LA+QH + +L + E H+ K+ALLTGS R
Sbjct: 340 AGHQCALLAPTEVLASQHARSIRSMLGTLAAGGELGSHELATKVALLTGSMSTAAKRSAL 399
Query: 613 KDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMA 672
D TGD +VIGTH+LI ++VEF L + +VDEQ RFGV QR +K S
Sbjct: 400 LDAVTGDAGIVIGTHALIEDRVEFLDLAMVVVDEQHRFGVEQRDALRAKARGNS------ 453
Query: 673 MVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEG 732
+PH+L M+ATPIPRT+A++ GD+ + +T+LP GR PI + ++
Sbjct: 454 --------------SPHLLVMTATPIPRTIAMSTLGDLETSVLTELPRGRSPIISNVVPA 499
Query: 733 NEK 735
K
Sbjct: 500 RAK 502
>gi|407983079|ref|ZP_11163740.1| ATP-dependent DNA helicase RecG [Mycobacterium hassiacum DSM 44199]
gi|407375362|gb|EKF24317.1| ATP-dependent DNA helicase RecG [Mycobacterium hassiacum DSM 44199]
Length = 761
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 156/531 (29%), Positives = 243/531 (45%), Gaps = 70/531 (13%)
Query: 226 ENCGFYTLRKLLHHFPRTYAD---LQNAQIDLDDGQYFIFIGEIISSR--GMK------- 273
E+ G T+ LL H+PR Y+D + + +L++G++ F+ I + + MK
Sbjct: 22 EHLGIRTVNDLLRHYPRKYSDGTTVLDENDELEEGEHVTFVDVITAVKVGNMKPQYDKKT 81
Query: 274 -AGCSFSFLEVIVGCEIADTETT--SGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFL 330
+ ++ + +G T + D ++N + I +FRGT + P
Sbjct: 82 KRTRTRKYVRITLGRRKPVVTATFFNADWMLNDLVEGTRLILSGEVGYFRGTLQLTHPAF 141
Query: 331 KSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKG 390
+E SG++ +S M+ D+L +PIYP+
Sbjct: 142 LVLESP---------SGRMIGSKS-----MKTIASTAGATGDELLAAFDRDFFPIYPATA 187
Query: 391 GLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKR 450
L + + + L L +P+P+ +E L+ A IH + E D A R
Sbjct: 188 KLQTWEIYACVRQVLDVLDPIPEPLPESFLREHNLISEDQALRAIHTAERAVERDAAVAR 247
Query: 451 LIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPY 510
L FDE LQ + + L D L L + LP+
Sbjct: 248 LTFDEAIGLQWALVQRRFSDAAGSGPSAPLRD---------------DGLVAALRKQLPF 292
Query: 511 SLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTE 570
LT Q + I +L PMNR+LQG+VG GKT+V+ LA ++++ +GYQ A + PTE
Sbjct: 293 KLTDGQEDVLKVISAELAGTRPMNRMLQGEVGSGKTIVSVLAMLQMVDAGYQCALLAPTE 352
Query: 571 LLATQHYEHL------LKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
+LATQH + L + + + ++ALLTGS +Q R +R ++ +G+ +V+
Sbjct: 353 VLATQHARSIRDVLGPLAMAGQLGGAEGATRVALLTGSMSPQQKRAVRDEVASGEAGIVV 412
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+L+ + VEF L + +VDEQ RFGV QR R SK DG
Sbjct: 413 GTHALLQDAVEFHRLGMVVVDEQHRFGVEQRDRLRSK-------------APDG------ 453
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
+ PH+L M+ATPIPRT+AL YGD+ + + +LP GR PI T I +EK
Sbjct: 454 -ITPHLLVMTATPIPRTVALTHYGDLETSTLRELPRGRQPITTNTIFASEK 503
>gi|332638230|ref|ZP_08417093.1| ATP-dependent DNA helicase RecG [Weissella cibaria KACC 11862]
Length = 678
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 128/352 (36%), Positives = 181/352 (51%), Gaps = 46/352 (13%)
Query: 385 IYPSKGGLNASLLRDTIARALQALPA--NFDPVPKEITQEFGLLCLFDAYMGIHQPKHID 442
+YPS + A ++D I +AL D VP + + L+ D G+H P
Sbjct: 141 VYPSSKEIKAKTIKDLIIQALGKYGELLRTDIVPAYLRTRYKLMNHHDTVFGMHAPTDGQ 200
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
A AR+ F+EFF Q+ RL Q+++ + ++ R N + K
Sbjct: 201 VATEARRSASFEEFFVFQM-RL-QVIKSMDRD-------NRGRSINFNNDEL-------K 244
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
+ LP+ LT +Q ++EI+ D+++P+ MNRLLQGDVG GKTVVA LA I +G Q
Sbjct: 245 AFIATLPFELTDAQKRVVNEIVRDMRRPIHMNRLLQGDVGSGKTVVAALAMYAAITAGMQ 304
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
A M PTE+LA QH + + D K ++ LLTGST R I +D+ G++ +
Sbjct: 305 ATLMAPTEILAQQHAKTIGNFF-----DPDKVRVELLTGSTKTAARRQILEDVANGEVDI 359
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
+IGTH+LI + F L LA++DEQ RFGV QR
Sbjct: 360 LIGTHALIQPDIAFRNLGLAVIDEQHRFGVQQRATLR----------------------- 396
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
+ M P +LAM+ATPIPRTLA+ YG+M ++ I LP GR IKTY + NE
Sbjct: 397 EIGMNPDILAMTATPIPRTLAITAYGEMDVSIIDQLPAGRKQIKTYWLRSNE 448
>gi|365959520|ref|YP_004941087.1| ATP-dependent DNA helicase RecG [Flavobacterium columnare ATCC
49512]
gi|365736201|gb|AEW85294.1| ATP-dependent DNA helicase RecG [Flavobacterium columnare ATCC
49512]
Length = 700
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 142/408 (34%), Positives = 211/408 (51%), Gaps = 60/408 (14%)
Query: 330 LKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSK 389
+K I K+ + GK A N + M ++++ +E +LR + +YPS
Sbjct: 101 IKWIRENIKINTPYVIFGKTNAF--NGQFSMPHPEMELV-EEHKANLRTAMQA--VYPST 155
Query: 390 GGL-NASLLRDTIARALQALPAN-----FDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
L N + I + +Q L + +P + +E L+ A IH PK +
Sbjct: 156 EKLQNKGISNKVINKMMQQLFIETHTLFIETLPSYLLEELQLIPKNSALFNIHFPKSQEL 215
Query: 444 ADLARKRLIFDEFFYLQLGRLYQML----EGLGTQFEKEGLLDKYRKPRLNAAYMEGWSS 499
A+ RL F+E F++QL + + L + G FEK G N Y
Sbjct: 216 LQKAQFRLKFEELFFIQLQLISKNLLRKHKIKGHPFEKVGYY-------FNEMYT----- 263
Query: 500 LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
+ LP+ LT++Q + EI DL P MNRLLQGDVG GKT+VA ++ + + +
Sbjct: 264 ------KYLPFDLTNAQKKVLKEIRNDLGNPAQMNRLLQGDVGSGKTIVALMSMLLALDN 317
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
G+QA M PTE+LATQH+ + +L + + I LLT ST ++I ++LQ G
Sbjct: 318 GFQACIMAPTEILATQHFNGITELAKPLNIN-----IKLLTASTKTSDRKIIHEELQKGT 372
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
+ ++IGTH+L+ +KV+F L LAI+DEQ RFGV QR SKL+ +
Sbjct: 373 LHILIGTHALLEDKVQFKNLGLAIIDEQHRFGVEQR----SKLWKKA------------- 415
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PHVL M+ATPIPRTLA++LYGD+ ++ I +LPPGR PI+T
Sbjct: 416 -----ELPPHVLVMTATPIPRTLAMSLYGDLDVSVIDELPPGRKPIQT 458
>gi|422846063|ref|ZP_16892746.1| DNA helicase RecG [Streptococcus sanguinis SK72]
gi|325688114|gb|EGD30133.1| DNA helicase RecG [Streptococcus sanguinis SK72]
Length = 671
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 159/535 (29%), Positives = 257/535 (48%), Gaps = 95/535 (17%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + ++ +PG+ + + G TL+ LL +FP Y D ++ + DL+DG+ + G+
Sbjct: 3 LHQPLTVLPGVGPKSAEKFAKLGLETLQDLLLYFPFRYEDFKSKNVLDLEDGEKAVVSGQ 62
Query: 266 IISSRGMKA-GCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
+++ ++ G + L + G+ + ++ F
Sbjct: 63 VVTPANVQYYGYKRNRLRFTI---------KQGEVALAVN-------------------F 94
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY 383
+ P+L K +VG + V GK +A S ++ + + EDDL
Sbjct: 95 FNQPYLAE---KIEVGVNIAVFGKWDKAKASLTGMKL------LAQVEDDLQ-------- 137
Query: 384 PIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHI 441
P+Y G++ + L I A Q L + +P+ + + + L+ +A +H PK +
Sbjct: 138 PVYRLAQGISQASLVKLIKTAFDQGLDLLLEENLPQPLLERYQLVSRVEAVRAMHFPKDL 197
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
+ A +R+ F+E FY Q+ Q + +L + K N ++ S
Sbjct: 198 TDYKQALRRVKFEELFYFQM------------QLQ---VLKRESKAVSNGLKIDWQSDAV 242
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
+ ++LP+ LTS+Q +++EI+ DL+ P MNRLLQGDVG GKTVVA LA V +G+
Sbjct: 243 AEKKQSLPFELTSAQERSLAEILQDLRSPGHMNRLLQGDVGSGKTVVAGLAMYAVYTAGF 302
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q+A MVPTE+LA QH++ L +L + K+ALLTG + R ++ G +
Sbjct: 303 QSALMVPTEILAEQHFDSLAQLFPEL-------KLALLTGGMKAAERRETLSAIEKGQVD 355
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+++GTH+LI E V + AL L I+DEQ RFGV QR K D
Sbjct: 356 MIVGTHALIQEGVRYYALGLVIIDEQHRFGVEQRRILREK--------------GDN--- 398
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKG 736
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T ++ + G
Sbjct: 399 ------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIITRWVKHEQLG 447
>gi|209549324|ref|YP_002281241.1| ATP-dependent DNA helicase RecG [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209535080|gb|ACI55015.1| ATP-dependent DNA helicase RecG [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 701
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 149/438 (34%), Positives = 217/438 (49%), Gaps = 70/438 (15%)
Query: 310 KIYLHLKK------FFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREY 363
+++LH + FFRG +E + V V VSGKV N M
Sbjct: 92 RVFLHDETGELTLVFFRGQ-------AAWLEKQLPVDAEVTVSGKVDWF--NGRASMVHP 142
Query: 364 NIDVLKDEDDLSLRAKGRPY--PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQ 421
+ V DE A+ P PIYP GL+ LR I AL P + + + + Q
Sbjct: 143 DYIVRADE------AENLPLVEPIYPLTAGLSPKTLRKIIDAALPRFPELPEWIDQALAQ 196
Query: 422 EFGLLCLFDAYMGIHQPKH---IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKE 478
+ GL + D++ +H+P+ ID AR+RL +DEF QL
Sbjct: 197 KQGLPTIRDSFHMLHEPRDPADIDAQAPARRRLAYDEFLAGQLSLS-------------- 242
Query: 479 GLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQ 538
L + R ++ ++ ++ K+L++LP+SLTSSQ AI+E++ D+ M RLLQ
Sbjct: 243 --LVRQRLRKVAGQPVQATGEVSAKILKSLPFSLTSSQNEAIAEVLKDMAGTERMLRLLQ 300
Query: 539 GDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIAL 598
GDVG GKT+VA +A VI SG QA M PTE+LA QH+ + K + I +
Sbjct: 301 GDVGSGKTLVALMAMAAVIESGGQAVLMAPTEILARQHHATISKFAASA-----GLGIEI 355
Query: 599 LTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRF 658
LTG T ++ I + +G ++IGTH+L + V ++ L LA+VDEQ RFGV QR R
Sbjct: 356 LTGRTKGREREEILDRIASGAAQIIIGTHALFQDSVAYAKLMLAVVDEQHRFGVHQRLRL 415
Query: 659 NSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDL 718
+K ++PH+L M+ATPIPRTL LA +GDM ++++T+
Sbjct: 416 TAK-----------------------GISPHMLVMTATPIPRTLVLAAFGDMDVSKLTEK 452
Query: 719 PPGRIPIKTYIIEGNEKG 736
P GR PI+T + G
Sbjct: 453 PAGRKPIQTITVPMERTG 470
>gi|157362881|ref|YP_001469648.1| ATP-dependent DNA helicase RecG [Thermotoga lettingae TMO]
gi|157313485|gb|ABV32584.1| ATP-dependent DNA helicase RecG [Thermotoga lettingae TMO]
Length = 783
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 136/361 (37%), Positives = 192/361 (53%), Gaps = 46/361 (12%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
PIYP G++ +R + + + D +P+E+ ++ L+ + A +GIH PK
Sbjct: 249 PIYPLTHGISQKEIRRIVRENISCVCHYTDELPEELMKKRKLMDISRALLGIHFPKSNYH 308
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
+ +RL ++E F +Q L FE+ G L K + P L ++
Sbjct: 309 LKKSIERLAYEELFLMQFALLLSR-----KSFEEIGGLPK-KIP----------GKLAEE 352
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
LR LP+ LT SQ A +I DL PM+RLLQGDVGCGKTVVA LA ++ +G+Q+
Sbjct: 353 FLRKLPFKLTDSQKEAHRQIRADLMSNKPMSRLLQGDVGCGKTVVAQLAIVDNFEAGFQS 412
Query: 564 AFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLV 623
A M PT +LA QHY + + M + ALL G T ++ I++ L G+I++V
Sbjct: 413 AVMAPTSILAMQHYRRMSPAFEEM-----GIRTALLLGETSSREKEKIKRMLSDGEISVV 467
Query: 624 IGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDD 683
IGTH+LI E V FS L L I+DEQ RFGV QR SK G A+
Sbjct: 468 IGTHTLIQEDVSFSNLGLVIIDEQHRFGVKQREALVSK--------GKAL---------- 509
Query: 684 QHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN--EKGYENVY 741
L M+ATPIPRTLAL +YGD+ +T I ++PPGR +KT ++ + E+ YE V
Sbjct: 510 -----DTLVMTATPIPRTLALTIYGDLDITVIDEMPPGRKDVKTMLVSVSKLEQVYEFVK 564
Query: 742 K 742
K
Sbjct: 565 K 565
>gi|299532849|ref|ZP_07046236.1| ATP-dependent DNA helicase RecG [Comamonas testosteroni S44]
gi|298719073|gb|EFI60043.1| ATP-dependent DNA helicase RecG [Comamonas testosteroni S44]
Length = 701
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 133/368 (36%), Positives = 193/368 (52%), Gaps = 49/368 (13%)
Query: 384 PIYPSKGGLNASLLRDTIARAL------QALPANFDPVPKEITQEFGLLCLFD---AYMG 434
P+YP+ L + LR IA AL + LP P + + GL +D A +
Sbjct: 139 PVYPATASLPQAYLRRAIASALLRADLSETLPPGQSPPIAQFYGQNGLQPAYDLRNALIF 198
Query: 435 IHQPKH-------IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKP 487
+H P D + A +RL +E QL +Q+E + + R P
Sbjct: 199 LHHPTPDVALVTLEDHSHPAWQRLKAEELLAQQL-----------SQYEAKRERARLRAP 247
Query: 488 RLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTV 547
L G + LT++ L LP+ LT +Q + EI D+++ +PM+RLLQGDVG GKTV
Sbjct: 248 VLRP--QAGMADLTQQFLAQLPFGLTGAQQRVVGEIRADMERRIPMHRLLQGDVGSGKTV 305
Query: 548 VAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQ 607
VA L+ + I +G+Q A M PTE+LA QH+ L+ L+ + K K+A L G+ K+
Sbjct: 306 VAALSAVACIEAGWQCALMAPTEILAEQHFGKLVGWLEPILAPLGK-KVAWLAGAQKKKE 364
Query: 608 SRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSM 667
+ +++G+ LV+GTH++I E+V+F L LA++DEQ RFGV QR KL T M
Sbjct: 365 RAAMLALVESGEAALVVGTHAVIQEQVQFKNLALAVIDEQHRFGVAQRLALRQKLAATGM 424
Query: 668 SSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
PH+L MSATPIPRTLA++ Y D+ ++ I +LPPGR PI T
Sbjct: 425 E-------------------PHLLMMSATPIPRTLAMSYYADLDVSTIDELPPGRTPIVT 465
Query: 728 YIIEGNEK 735
+I + K
Sbjct: 466 KLISDSRK 473
>gi|121592808|ref|YP_984704.1| ATP-dependent DNA helicase RecG [Acidovorax sp. JS42]
gi|120604888|gb|ABM40628.1| ATP-dependent DNA helicase RecG [Acidovorax sp. JS42]
Length = 723
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 192/372 (51%), Gaps = 51/372 (13%)
Query: 384 PIYPSKGGLNASLLRDTIARAL------QALPANFDP--VPKEI--TQEFGL---LCLFD 430
P+YP+ L + LR +A AL + LP +P VP + + GL L +
Sbjct: 147 PVYPTVAQLPQAYLRRAVASALTRVELPETLPPGLEPPAVPSWVRGNGQNGLQRPWSLRE 206
Query: 431 AYMGIHQPKH-------IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDK 483
+ + +H P D + A +RL +E QL +L E +
Sbjct: 207 SLLFLHHPTPDVALATLQDHSHPAWQRLKAEELLAQQLSQLTAKRE-----------RAR 255
Query: 484 YRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGC 543
R P L G + L ++LL LP+SLT++Q EI DL +PVPM+RLLQGDVG
Sbjct: 256 LRAPALRPQAQAGSTPLHEQLLGVLPFSLTAAQRRVGEEIARDLARPVPMHRLLQGDVGS 315
Query: 544 GKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGST 603
GKTVVA LA + +G+Q A M PTE+LA QH+ L+ L + + + ++A L G
Sbjct: 316 GKTVVAALAATVCMDAGWQCALMAPTEILAEQHFAKLIGWLQPLLAARGR-QVAWLVGGQ 374
Query: 604 PVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLY 663
K+ + +++G+ LV+GTH++I E+V F L LA++DEQ RFGV QR KL
Sbjct: 375 KKKERAEMLARIESGEAALVVGTHAVIQEQVRFKNLALAVIDEQHRFGVAQRLALRKKLQ 434
Query: 664 YTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRI 723
+ M PH+L MSATPIPRTLA++ Y D+ ++ I +LPPGR
Sbjct: 435 HAGME-------------------PHLLMMSATPIPRTLAMSYYADLDVSTIDELPPGRT 475
Query: 724 PIKTYIIEGNEK 735
PI T +I + K
Sbjct: 476 PIVTKLIADSRK 487
>gi|83589774|ref|YP_429783.1| ATP-dependent DNA helicase RecG [Moorella thermoacetica ATCC 39073]
gi|83572688|gb|ABC19240.1| ATP-dependent DNA helicase RecG [Moorella thermoacetica ATCC 39073]
Length = 680
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 170/548 (31%), Positives = 261/548 (47%), Gaps = 99/548 (18%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGE 265
+LD ++ + + + +L G T+ LL HFPR Y D + + DL + GE
Sbjct: 2 ILDHPVATLKYVGHQRAARLSRLGIQTVGDLLWHFPRRYEDRRQLK-DLAA----VAPGE 56
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLK------KFF 319
+++ + V I + +++++ L+ +
Sbjct: 57 VVTVQ------------------------------VTIRAWEEREVRPRLRLIRALIQGR 86
Query: 320 RGTRFT---SIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSL 376
+GT F + P+LK + G V ++GKVR ++ +Y E D L
Sbjct: 87 QGTGFAVWFNQPYLKR---QMPPGTGVILTGKVRYRDYRPEIQVSDYEA---LGEGDPGL 140
Query: 377 RAKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGI 435
GR P Y GL+ LR I AL+A+ + V P + + + L+ A I
Sbjct: 141 HT-GRIVPFYALTAGLSQRWLRLVIHLALEAVAGDLPEVLPLSLCRRYRLIPRLQALKYI 199
Query: 436 HQPKHIDEADLARKRLIFDEFFYLQLG-RLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYM 494
H P AR+RL ++E +LG L+++ + G Q A+
Sbjct: 200 HFPPDAAGLHQARRRLKYEELLIWELGLNLHRVQQEQGRQ---------------GIAHT 244
Query: 495 EGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACM 554
++L +L+ +LP+ LTS+Q A++EI+ D++ P PM RLLQGDVG GKTVVA A +
Sbjct: 245 PA-NNLVNRLVDSLPFKLTSAQARALAEILADMEAPRPMARLLQGDVGSGKTVVAAAAMV 303
Query: 555 EVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKD 614
+ + G+QAA M PTE+LA QH L +LL + + + LTGSTP + I
Sbjct: 304 KAVAGGWQAALMAPTEVLAEQHGRTLGQLLAPL-----RLPVVTLTGSTPRTERENILAG 358
Query: 615 LQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMV 674
L +G + LV+GTH+LI + V F +L L ++DEQ RFGV QR +K
Sbjct: 359 LASGQLPLVVGTHALIQDDVSFKSLGLVVIDEQHRFGVDQRAALQTK------------- 405
Query: 675 NSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
P +L M+ATPIPRTLALA+YGD+ ++ + +LPPGR P+ TY+I E
Sbjct: 406 ----------GECPDLLVMTATPIPRTLALAIYGDLDISVLDELPPGRQPVATYVI--TE 453
Query: 735 KGYENVYK 742
K Y+
Sbjct: 454 KQRPRAYR 461
>gi|384159429|ref|YP_005541502.1| ATP-dependent DNA helicase RecG [Bacillus amyloliquefaciens TA208]
gi|328553517|gb|AEB24009.1| ATP-dependent DNA helicase RecG [Bacillus amyloliquefaciens TA208]
Length = 682
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 142/411 (34%), Positives = 213/411 (51%), Gaps = 65/411 (15%)
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKD---EDDLSLRAKGRPYP 384
P+LK K +G V +SGK R ++ LK+ ++D S+ P
Sbjct: 100 PYLKK---KLTLGSVVTISGKWDKHRQT-------VSVQELKNGPHQEDKSIE------P 143
Query: 385 IYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
+Y K + ++R I AL+ N DP+P+++ + L A +HQP+ +
Sbjct: 144 VYSVKENVTVKMMRRFIKEALKHHLDNIADPLPEKLRISYKLPDYKQALQTMHQPETRES 203
Query: 444 ADLARKRLIFDEFFYLQLG-RLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
AR+R +++EF QL + ++ E + + +G+ + +L A
Sbjct: 204 LQQARRRFVYEEFLLFQLKMQAFRKAE----REQSKGISHVFPAEKLAA----------- 248
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
+LP+SLT++Q+ + EI DL P MNRLLQGDVG GKT VA + I SGYQ
Sbjct: 249 -FTASLPFSLTNAQMRVLREITADLTSPYRMNRLLQGDVGSGKTAVAAITLYAAILSGYQ 307
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
A MVPTE+LA QH + L+ L N ED + IALLT S K+ R + + L G+I +
Sbjct: 308 GALMVPTEILAEQHADSLVSLFAN--EDVN---IALLTSSVKGKRRRELLERLALGEIDI 362
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
++GTH+LI ++VEF AL L I DEQ RFGV QR + +K
Sbjct: 363 LVGTHALIQDEVEFKALSLVITDEQHRFGVDQRKKLRNK--------------------- 401
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN 733
P VL M+ATPIPRTLA+ ++G+M ++ I ++P GR I+TY ++ +
Sbjct: 402 --GQDPDVLFMTATPIPRTLAITVFGEMDVSVIDEMPAGRKQIETYWVKHD 450
>gi|375086245|ref|ZP_09732663.1| ATP-dependent DNA helicase RecG [Megamonas funiformis YIT 11815]
gi|374565809|gb|EHR37069.1| ATP-dependent DNA helicase RecG [Megamonas funiformis YIT 11815]
Length = 693
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 123/317 (38%), Positives = 169/317 (53%), Gaps = 41/317 (12%)
Query: 413 DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLG 472
D VP I +++ L A IH P+ E + A+K LIF+E F +Q G L
Sbjct: 185 DVVPNFIREKYDLWDKQTAIKKIHFPQTRQELEKAKKSLIFEELFLIQAGLL-------- 236
Query: 473 TQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVP 532
LL K + + S L K + LP++LT+ Q EI D+++ V
Sbjct: 237 -------LLKKQHQVKNKGIKFLSNSELVKTVKNNLPFNLTAEQEKVWQEICLDMQKDVQ 289
Query: 533 MNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKH 592
M RL+QGDVG GKTV+A L+ ++ I +GYQ A M PTE+LA QHY + +LL+ +
Sbjct: 290 MQRLVQGDVGSGKTVIAILSLVKAIENGYQGALMAPTEILALQHYGKIKELLEPL----- 344
Query: 593 KPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGV 652
+ LLTGS VK+ R I + L G I LVIGTH+LI + V F L L + DEQ RFGV
Sbjct: 345 NIHVGLLTGSLKVKEKRQILEGLADGTIDLVIGTHALIQDNVIFKNLGLVVTDEQHRFGV 404
Query: 653 VQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSL 712
QR + K + P VL M+ATPIPRT+ L +YGD+ +
Sbjct: 405 NQRAKLEGK---------------------GEDFLPDVLVMTATPIPRTMTLTVYGDLDV 443
Query: 713 TQITDLPPGRIPIKTYI 729
+ I +LPPGR PI+T++
Sbjct: 444 SFIKELPPGRKPIRTFV 460
>gi|302558168|ref|ZP_07310510.1| ATP-dependent DNA helicase RecG [Streptomyces griseoflavus Tu4000]
gi|302475786|gb|EFL38879.1| ATP-dependent DNA helicase RecG [Streptomyces griseoflavus Tu4000]
Length = 740
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 154/528 (29%), Positives = 247/528 (46%), Gaps = 85/528 (16%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNAQI----DLDDGQYFIFIGEIISSRGMKAGCSFSFL 281
E+ G +T+ LLHH+PR Y + Q+ DL ++ + ++ +R +F+
Sbjct: 30 EHLGLHTVGDLLHHYPRRYE--ERGQLTHLADLPMDEHVTVVAQVADARLH----TFASA 83
Query: 282 EVIVG----CEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKH 337
+ G E+ T+ + ++V +G ++ K+ GTR
Sbjct: 84 KAPRGKGQRLEVTITDGSGRLQLVFFGAG----VHKPHKELLPGTR-------------- 125
Query: 338 KVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRA-KGRPYPIYPSKGGLNASL 396
+GKV N ++ ++L+D+ + ++ G PIYP+ L +
Sbjct: 126 -----AMFAGKVSVF--NRRVQLAHPAYELLRDDAEETVETWAGALIPIYPATAKLESWK 178
Query: 397 LRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEF 456
+ + L + DP+P + GL+ L +A + IH+P + + AR RL +DE
Sbjct: 179 IGKALQTVLPSAQEAVDPLPDSLRAGRGLVGLPEALLKIHRPHTKADVEDARARLKWDEA 238
Query: 457 FYLQLGRLYQMLEGLGTQFEKEGLLDKY-RKPRLNAAYMEGWSSLTKKLLRALPYSLTSS 515
F LQ+ L + + L R+P+ + L LP++LT
Sbjct: 239 FVLQVA--------LARRRHADAQLPAVARRPKPD--------GLLTAFDGRLPFTLTEG 282
Query: 516 QLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQ 575
Q +EI DL PM+RLLQG+VG GKT+VA A + V+ +G QAA + PTE+LA Q
Sbjct: 283 QRKVSAEIFTDLATEHPMHRLLQGEVGSGKTMVALRAMLAVVDAGGQAAMLAPTEVLAQQ 342
Query: 576 HYEHLLKLLDNMEED------KHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSL 629
H+ + +++ + E + K+ LLTGS R DL TG+ LVIGTH+L
Sbjct: 343 HHRSVTEMMGELAEGGMLGGAETATKVVLLTGSMGAAARRHALLDLATGEAGLVIGTHAL 402
Query: 630 IAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPH 689
I +KV+F L L +VDEQ RFGV QR K PH
Sbjct: 403 IEDKVKFHDLGLVVVDEQHRFGVEQRDALRGK----------------------GKQPPH 440
Query: 690 VLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGY 737
+L M+ATPIPRT+A+ ++GD+ + + LP GR PI ++++ +K +
Sbjct: 441 LLVMTATPIPRTVAMTVFGDLETSVLDQLPAGRSPIASHVVPAADKPH 488
>gi|269794445|ref|YP_003313900.1| ATP-dependent DNA helicase RecG [Sanguibacter keddieii DSM 10542]
gi|269096630|gb|ACZ21066.1| ATP-dependent DNA helicase RecG [Sanguibacter keddieii DSM 10542]
Length = 758
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 155/543 (28%), Positives = 241/543 (44%), Gaps = 75/543 (13%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
LD+ ++ V KR +QL G T LL H+PR YAD G +
Sbjct: 9 LDEPLTKV--FEKRTSNQLAKLGLTTTGDLLRHYPRRYAD----------------PGAM 50
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
+ G + + +V + + + G + + S ++ L T F
Sbjct: 51 SQLSTLVVGEHVTVMAQVVSATVREMRSRGGAMLQAVVSDGTDRLSL--------TFFAK 102
Query: 327 IP-FLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREY---NIDVLKDEDDLSLRAKGRP 382
P L++ E + K G +G V R+ +Y +DV + D +L R
Sbjct: 103 HPGALRTHESRLKPGRAGLFTGVVSEYRNERQLTHPDYLLPGVDVENEVD--ALLEVSRL 160
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPAN--FDPVPKEITQEFGLLCLFDAYMGIHQPKH 440
PIYP+ + + + + L L + DPVP ++ L+ L A+ IH P+
Sbjct: 161 MPIYPATASFASWKIHKCVRQVLDPLHVDDLADPVPADVLGRRNLVPLVQAFRDIHLPES 220
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
E +KRL ++E F LQ + E + L+ E S+
Sbjct: 221 ESEWHRGQKRLRYEEAFVLQTALALRRSEAAALEATSRTLV-------------EDGPSI 267
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
+ ALP++LT+ Q EI +L P PM RLLQG+VG GKTVVA A ++V+ +G
Sbjct: 268 LRDFDAALPFTLTTGQREVGDEIAAELAAPHPMQRLLQGEVGSGKTVVALRAMLQVVDAG 327
Query: 561 YQAAFMVPTELLATQHYE------HLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKD 614
QAA + PTE+LA QH L + H ++AL+TGS P + D
Sbjct: 328 GQAALLAPTEVLAAQHARTLAALLGDLAAGGMLGGAAHGTRVALVTGSQPAAVKKKNLLD 387
Query: 615 LQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMV 674
+G +V+GTH+L++ V+F+ L L +VDEQ RFGV QR +K
Sbjct: 388 AASGAAGIVVGTHALLSAGVQFAELGLVVVDEQHRFGVEQRDLLRAK------------- 434
Query: 675 NSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
PH+L M+ATPIPRT+A+ ++GD+ + + ++P GR I TY++ +
Sbjct: 435 ---------ARTVPHLLVMTATPIPRTVAMTVFGDLETSTLREIPAGRSGITTYVVPAQK 485
Query: 735 KGY 737
+
Sbjct: 486 PAW 488
>gi|403530631|ref|YP_006665160.1| ATP-dependent DNA helicase RecG [Bartonella quintana RM-11]
gi|403232702|gb|AFR26445.1| ATP-dependent DNA helicase RecG [Bartonella quintana RM-11]
Length = 702
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 154/418 (36%), Positives = 207/418 (49%), Gaps = 64/418 (15%)
Query: 318 FFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLR 377
FF R P+LK + G+ V VSGKV R N M + D S +
Sbjct: 107 FFHAQR----PWLKK---QLPEGKKVIVSGKVE--RFNGQLSM------IHPDHIAPSEQ 151
Query: 378 AKGRPY--PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGI 435
+ P P+YPS GL+A LR TI AL+ +P + + + + ++ A I
Sbjct: 152 SNQMPLIEPVYPSTAGLSAKTLRRTIQNALEYIPLLPEWIEESVKKQQNFSSFSVALHRI 211
Query: 436 HQPKHIDEADL---ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAA 492
H P + D+ L ARKRL +DE QL LG L + + L+ A
Sbjct: 212 HTPINPDDLSLKSAARKRLAYDELLACQLA--------LG--------LVRLKTKSLSGA 255
Query: 493 YMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLA 552
+ TKKLL+ALP+ LT+ Q AI +I DL P PM RLLQGDVG GKTVVA +A
Sbjct: 256 SRPPKGTYTKKLLKALPFQLTNGQKKAIQDIANDLASPEPMLRLLQGDVGAGKTVVALMA 315
Query: 553 CMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIR 612
++ + Q+A M PTE+LA QH+ + L +K + LLTG K I
Sbjct: 316 SAQIAENSGQSALMAPTEVLARQHFATIAPL-----AEKIGLQTVLLTGREKGKLRANIL 370
Query: 613 KDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMA 672
KD +G +++IGTH+LI V + L L I+DEQ RFGV QR +K
Sbjct: 371 KDTLSGQASIIIGTHALIQNNVAYKNLALTIIDEQHRFGVHQRLALTAK----------- 419
Query: 673 MVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
G+ P +L M+ATPIPRTL L +GDM ++QIT+ P GR PI T I+
Sbjct: 420 -----GN-------KPDMLVMTATPIPRTLVLTAFGDMDISQITEKPTGRQPITTAIL 465
>gi|387927072|ref|ZP_10129751.1| ATP-dependent DNA helicase RecG [Bacillus methanolicus PB1]
gi|387589216|gb|EIJ81536.1| ATP-dependent DNA helicase RecG [Bacillus methanolicus PB1]
Length = 682
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 158/530 (29%), Positives = 244/530 (46%), Gaps = 97/530 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L++ ++ + G+ + L T+ L HFP Y D + DL D ++
Sbjct: 5 LNQTVTAIKGIGEETAQILAEMNILTVNDLFEHFPYRYEDYRLR--DLADAKH------- 55
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKK---IYLHLKKFFRGTR 323
E E E + G+KK I L + ++
Sbjct: 56 --------------------EERVTVEGKVHSEPSLVYYGRKKSRLTIRLLVGRYLIQVI 95
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY 383
F + P+LK+ K + + V+GK R + + + +K + +
Sbjct: 96 FFNQPYLKN---KISINNTITVTGKWDQHRQS-----------ITANSIQFGPYSKNKEF 141
Query: 384 -PIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
P+Y KG L LR I A + + +P + +++ L+ DA IH P
Sbjct: 142 EPVYAVKGNLTVKGLRRLINLAFSQFGEDIHETLPVSLLKKYKLMNRRDALRAIHFPFTS 201
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKE---GLLDKYRKPRLNAAYMEGWS 498
++ AR+R +++EF Y Q+ ++ L +FE+E G+ KY ++
Sbjct: 202 EDIKQARRRFVYEEFLYFQIK-----MQAL-RKFERENSNGVAQKYDLEKV--------- 246
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
K+ + +LP+SLT++Q +EI++D+K MNRLLQGDVG GKT VA +A +
Sbjct: 247 ---KQFISSLPFSLTTAQKRVTNEILFDMKSQFRMNRLLQGDVGSGKTAVATIALFASVT 303
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+GYQ A MVPTE+LA QH E + LL+ + LLT + K+ R I + LQ G
Sbjct: 304 AGYQGALMVPTEILAEQHAESITSLLEPF-----GIRCELLTSAIKGKRRREILQQLQAG 358
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+I ++IGTH+LI ++V F L L I DEQ RFGV QR K G
Sbjct: 359 EIDILIGTHALIQDEVHFHQLGLVITDEQHRFGVEQRRVLREK----------------G 402
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTY 728
P VL M+ATPIPRTLA+ +G+M ++ I ++P GR I+TY
Sbjct: 403 EN-------PDVLFMTATPIPRTLAITAFGEMDVSVINEMPAGRKTIETY 445
>gi|212550469|ref|YP_002308786.1| ATP-dependent DNA helicase RecG [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212548707|dbj|BAG83375.1| ATP-dependent DNA helicase RecG [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 707
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 132/357 (36%), Positives = 195/357 (54%), Gaps = 45/357 (12%)
Query: 389 KGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA 447
K L++ ++ I L+ + + + +EI E+ L+ L +A IH PK D A
Sbjct: 168 KVSLHSRTIKQMIIEILENIKEPLSETLSREIINEYKLISLDEAIRNIHFPKSNDLLQEA 227
Query: 448 RKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRA 507
+ RL F+E FYLQL L +E +D +R + + L
Sbjct: 228 QYRLKFEELFYLQLSIL-------SAAKHREKHIDGFRFKEIGENFY--------FLKNN 272
Query: 508 LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMV 567
LP+ LT++Q ++EI ++ MNRLLQGDVG GKT++A L+ + +G+Q A MV
Sbjct: 273 LPFELTTAQKRVVNEIWKNMNTGKQMNRLLQGDVGSGKTLIALLSILLATDNGFQGAIMV 332
Query: 568 PTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTH 627
PTE+LA QHYE + ++L+ K++LLTGST K + +++G+I ++IGTH
Sbjct: 333 PTEVLAIQHYETISRMLNG-----SAIKVSLLTGSTKNKLREEMLPKVKSGEIQILIGTH 387
Query: 628 SLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMA 687
+LI + VEF+ L L +VDEQ RFGV QR + + N + +P
Sbjct: 388 ALIEDSVEFNNLGLVVVDEQHRFGVTQRAK---------------LWNKNSNP------- 425
Query: 688 PHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTY--IIEGNEKGYENVYK 742
PHVL M+ATPIPRTLA+ +YGD+ ++ I +LPPGR P+ TY E +K YE V K
Sbjct: 426 PHVLVMTATPIPRTLAMTIYGDLDVSIIDELPPGRKPVDTYHRYDEKRDKIYEYVRK 482
>gi|332297440|ref|YP_004439362.1| ATP-dependent DNA helicase RecG [Treponema brennaborense DSM 12168]
gi|332180543|gb|AEE16231.1| ATP-dependent DNA helicase RecG [Treponema brennaborense DSM 12168]
Length = 744
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 135/388 (34%), Positives = 196/388 (50%), Gaps = 49/388 (12%)
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
+P+Y GL+ + +R + +ALQ D +P ++ + LL A +H P+ +
Sbjct: 155 FPVYSLTAGLSQAQMRKAVRKALQEYARGIEDTLPADVIETRHLLRKQAALHAMHCPETL 214
Query: 442 DEADLARKRLIFDEFFYLQL----------GRL----YQMLEGLGTQFEKEGLLDKYRKP 487
+A AR+ LI++E ++ Q GRL Q G+ E ++ +
Sbjct: 215 RQALDARRTLIYEELYHFQTAIGLSALRHKGRLPDDEKQPFFATGSDVMPENSEREHTQE 274
Query: 488 RLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDL-------------KQPVPMN 534
L + S KKL +LP+ LT+ Q+ ISE+ D+ K M
Sbjct: 275 TLTETFARKLSPRQKKLFDSLPFELTADQMKCISEMNDDIDRAEQSRAKAAAGKPLYTMA 334
Query: 535 RLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKP 594
RL+QGDVG GKT+ AF AC+ G Q A + PTELLA QH E KLL+
Sbjct: 335 RLVQGDVGSGKTLTAFFACLRTADWGGQCALLAPTELLARQHAESAAKLLEQT-----GV 389
Query: 595 KIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQ 654
+A LTG+ + + K L+ GDI +VIGTH+L + V + LRLA++DEQ RFGV+Q
Sbjct: 390 TLAFLTGNITAESRGPLLKSLKAGDIDIVIGTHALFSRNVHYKDLRLAVIDEQHRFGVLQ 449
Query: 655 RGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQ 714
R K +P Q++ P +L +SATPIPRTLAL +GD+ ++
Sbjct: 450 RNAIIEK------------GRQPAAPDSPQYVVPSLLMLSATPIPRTLALTAFGDLDVSV 497
Query: 715 ITDLPPGRIPIKTYIIE-GNEKGYENVY 741
I +P GR+P+KTY+ GNEK NVY
Sbjct: 498 IRTMPRGRLPVKTYLTRMGNEK---NVY 522
>gi|325678863|ref|ZP_08158461.1| ATP-dependent DNA helicase RecG [Ruminococcus albus 8]
gi|324109367|gb|EGC03585.1| ATP-dependent DNA helicase RecG [Ruminococcus albus 8]
Length = 678
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 132/350 (37%), Positives = 180/350 (51%), Gaps = 47/350 (13%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPAN-FDPVPKEITQEFGLLCLFDAYMGIHQPKHID 442
P+Y G+ +LLR + AL +L A ++PVP EI +E L L A IH P +
Sbjct: 144 PVYRLTEGITQNLLRQNVHAALTSLGAQIYEPVPAEILRENELCSLGFAMQNIHFPTDMH 203
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
++A+ RL+FDE L LG L + K R M G S
Sbjct: 204 TLEMAKDRLVFDELLTLALGML----------------MMKSRCREHAGCVMTGES--ID 245
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
+ LP+ LT Q +AI++ I D+++ PMNRL+QGDVG GKT VA A +G Q
Sbjct: 246 EYYSGLPFELTDGQKNAINDCIADMQKNFPMNRLIQGDVGSGKTAVAAGAAFFAYKNGCQ 305
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
A M PTE+LA QHYE L L+ + K+ LLTGS K+ ++ + G+ ++
Sbjct: 306 TALMAPTEILAAQHYETLCGFLEPL-----GVKVVLLTGSMTAKKKEKVKAGIAAGEYSV 360
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
V+GTH+L+ F L L I DEQ RFGV QR AM+ G
Sbjct: 361 VVGTHALVQASTTFKKLGLVITDEQHRFGVGQR----------------AMLAGKGD--- 401
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEG 732
PH L MSATPIPRTLAL +YGD+ ++ + +LP GR P++TY + G
Sbjct: 402 ----NPHKLVMSATPIPRTLALMIYGDLDISVLKELPKGRQPVETYAVTG 447
>gi|293365912|ref|ZP_06612615.1| DNA helicase RecG [Streptococcus oralis ATCC 35037]
gi|307702316|ref|ZP_07639274.1| ATP-dependent DNA helicase RecG [Streptococcus oralis ATCC 35037]
gi|291315590|gb|EFE56040.1| DNA helicase RecG [Streptococcus oralis ATCC 35037]
gi|307624119|gb|EFO03098.1| ATP-dependent DNA helicase RecG [Streptococcus oralis ATCC 35037]
Length = 671
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 161/532 (30%), Positives = 254/532 (47%), Gaps = 99/532 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ L+ L ++ +G + + WS
Sbjct: 197 LAEYKQALRRIKFEELFYFQM-----QLQSLKSENRVQG-----------SGLVLNWSQE 240
Query: 501 TKKLLRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
+++ LP+SLT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +
Sbjct: 241 KVTVVKENLPFSLTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTA 300
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
GYQAA MVPTE+LA QH+E L L ++ K+ALLTGS + R + + + G+
Sbjct: 301 GYQAALMVPTEILAEQHFESLQNLFPDL-------KLALLTGSLKAAEKREVLETIAKGE 353
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
L+IGTH+LI + V+++ L L I+DEQ RFGV QR K D
Sbjct: 354 ADLIIGTHALIQDGVDYACLGLIIIDEQHRFGVGQRRILREK--------------GDN- 398
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 --------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|392529134|ref|ZP_10276271.1| ATP-dependent DNA helicase RecG [Carnobacterium maltaromaticum ATCC
35586]
gi|414083590|ref|YP_006992298.1| ATP-dependent DNA helicase RecG [Carnobacterium maltaromaticum
LMA28]
gi|412997174|emb|CCO10983.1| ATP-dependent DNA helicase RecG [Carnobacterium maltaromaticum
LMA28]
Length = 683
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 156/525 (29%), Positives = 243/525 (46%), Gaps = 96/525 (18%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGEIISS 269
I +P + + L G YT+ +L H+P Y D+Q + +++D + G+++S
Sbjct: 9 IELLPQVGPKRLEALHQLGIYTILDILSHYPFRYEDIQVKDLTEIEDQEKVTLKGDVVS- 67
Query: 270 RGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKK---IYLHLKKFFRGTRFTS 326
E V G KK L + F +
Sbjct: 68 -----------------------------EAVLTRFGPKKNRLVFRLVIDHAVIAVSFFN 98
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
P+LKS K GE + V GK R + + I + E + S IY
Sbjct: 99 QPYLKS---KIVAGEELAVFGKWDGKRKS----LTGIKILGIATEQEAS-----NFESIY 146
Query: 387 PSKGGLNASLLRDTIARALQ----ALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHID 442
G+ + + +A + +P + +P + +++ L+ +A +H P +
Sbjct: 147 NGNKGIKQKTIFQLVEQAYERYQDVIP---EIIPNYLREKYRLISHREAIYAMHFPTAEE 203
Query: 443 EADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
+ AR+ ++F+EF Q+ K +L K K + + +
Sbjct: 204 QTIQARREVVFEEFLVFQM---------------KMQVLRKQEKASGRGTAILYEVADLR 248
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
+ +++LP+ LT +Q ++EI DL+Q + M+RLLQGDVG GKT+VA +A + +G+Q
Sbjct: 249 RFIQSLPFELTKAQKRVVNEICSDLRQSLHMHRLLQGDVGSGKTIVAAIALFATVNAGFQ 308
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
A MVPT +LA QH E L +L D +E K+ALLTG+T K+ R I + L +G++ +
Sbjct: 309 GALMVPTGILAEQHMESLDQLFDPLE-----VKVALLTGATKTKERREILEQLASGELDV 363
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
+IGTH+LI E V F+ L L I DEQ RFGV QR K +
Sbjct: 364 IIGTHALIQEDVHFAKLGLVITDEQHRFGVNQRKILREKGTH------------------ 405
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
P VL M+ATPIPRTLA+ YG+M ++ I +LP GRIPI+T
Sbjct: 406 -----PDVLFMTATPIPRTLAITAYGEMDVSIIDELPAGRIPIET 445
>gi|451818120|ref|YP_007454321.1| ATP-dependent DNA helicase RecG [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451784099|gb|AGF55067.1| ATP-dependent DNA helicase RecG [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 677
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 159/521 (30%), Positives = 240/521 (46%), Gaps = 90/521 (17%)
Query: 211 ISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSR 270
IS + G+ + +L CG + + +L +FPR Y + ++ +D ++ GE
Sbjct: 7 ISVLKGVGPKSMEKLNKCGIFNILDILLYFPRDY-EFVDSNVDFEN-----ITGED---- 56
Query: 271 GMKAGCSFSFLEVIVGCEIA----DTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
+ I+ CE+ D T S + I+ + ++ +
Sbjct: 57 -----------KQILKCEVVSFGRDIRTKSRKILTTIE--------FNYNNHKVAGKWFN 97
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
P++K+ K+G+ + GK + R N E+ I E+ LS P Y
Sbjct: 98 QPYIKN---SFKLGQIYNLMGKFK--RIGNTLEVVNPTITC---EEALS----SEIIPKY 145
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL 446
P KG ++ LL I L + + +PK I +++ L+ L +A IH P++ + D
Sbjct: 146 PLKGDISNKLLEKLINEILAVMKIK-ENLPKNIVEKYSLISLDEAIRSIHFPENKEFLDK 204
Query: 447 ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLR 506
A RL F E F + L + Y E W+
Sbjct: 205 AIIRLKFQELFTYSMKLLLLKYKIKKNN---------------TGIYFE-WAKELNIFKE 248
Query: 507 ALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFM 566
LP+ LT++Q I +I+ D K MNRL+QGDVG GKT+VA +A VI +GYQ AFM
Sbjct: 249 RLPFPLTNAQTKVIRDILRDQKSNYSMNRLIQGDVGSGKTIVALIAIFNVIKNGYQCAFM 308
Query: 567 VPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGT 626
PTE+LA QH+E K+ + + I LLTGST K+ + I++ +++ + L+IGT
Sbjct: 309 APTEILANQHFEEAKKIYKDFD-----VAIELLTGSTSAKEKQRIKERIKSNETILLIGT 363
Query: 627 HSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHM 686
H+L + V FS L L + DEQ RFGV QR + +K G D
Sbjct: 364 HALFQDDVVFSKLGLIVTDEQHRFGVEQRSKLINK----------------GKRAD---- 403
Query: 687 APHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
L M+ATPIPRTLAL LY D+ ++ I +LPPGR I T
Sbjct: 404 ---CLVMTATPIPRTLALYLYSDLDVSIIDELPPGRKKIDT 441
>gi|319407173|emb|CBI80812.1| ATP-dependent DNA helicase [Bartonella sp. 1-1C]
Length = 701
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 138/351 (39%), Positives = 185/351 (52%), Gaps = 49/351 (13%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
PIYPS GL+ LR +AL ++P+ + + + I +E + IH P + D+
Sbjct: 159 PIYPSTAGLSTKTLRRATKKALDSIPSLPEWIEESIKKEHNFSSFAVSLRRIHDPINPDD 218
Query: 444 ADL---ARKRLIFDEFFYLQLGRLYQMLEGLG-TQFEKEGLLDKYRKPRLNAAYMEGWSS 499
L ARKRL +DEFF Q+ LG + E + L R P +
Sbjct: 219 LTLESTARKRLAYDEFFANQIA--------LGLVRLETKSLSGTSRPPT---------GT 261
Query: 500 LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
TKKLL LP+ LT+ Q+ AI +I DL P PM RLLQGDVG GKTVVA +A ++ +
Sbjct: 262 YTKKLLEILPFQLTNGQIKAIKDIENDLASPEPMLRLLQGDVGTGKTVVALMAIAQIAEN 321
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
Q+A MVPTE+LA QH+ + L +K + ALLTG K I + +G+
Sbjct: 322 SGQSALMVPTEVLARQHFATITPL-----AEKIGLQTALLTGREKGKVRARILDTILSGE 376
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
+++IGTH+LI E V ++ L LAI+DEQ RFGV QR +K G+
Sbjct: 377 ASIIIGTHALIQEHVTYNNLALAIIDEQHRFGVQQRLTLTAK----------------GN 420
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
P +L M+ATPIPRTL L YGDM ++ITD P GR PI T I
Sbjct: 421 -------KPDMLVMTATPIPRTLILTSYGDMDASKITDKPIGRHPITTATI 464
>gi|319946374|ref|ZP_08020612.1| DNA helicase RecG [Streptococcus australis ATCC 700641]
gi|417919968|ref|ZP_12563489.1| ATP-dependent DNA helicase RecG [Streptococcus australis ATCC
700641]
gi|319747527|gb|EFV99782.1| DNA helicase RecG [Streptococcus australis ATCC 700641]
gi|342831524|gb|EGU65840.1| ATP-dependent DNA helicase RecG [Streptococcus australis ATCC
700641]
Length = 671
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 165/535 (30%), Positives = 255/535 (47%), Gaps = 99/535 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + +S +PG+ + + + G T+ LL +FP Y D ++ + DL+DG+ + G
Sbjct: 3 LHQSLSVLPGIGPKSAEKYKKLGIETVEDLLLYFPFRYEDFKSKNVLDLEDGEKAVVSGL 62
Query: 266 IISSRGMKA-GCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
+ + ++ G + L + G+ V+ + F
Sbjct: 63 VATPANVQYYGYKRNRLRFTI---------KQGELVLAVS-------------------F 94
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY 383
+ P+L K ++G+ V V GK +A + ++ + + EDDL
Sbjct: 95 FNQPYLAD---KIELGQTVAVFGKWDKAKGALTGMKL------LAQVEDDLQ-------- 137
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANF--DPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
P+Y G++ S L I A +A + +P+ + ++ LL A +H PK +
Sbjct: 138 PVYRLSQGVSQSALVKVIKTAFEAGLDQLLEENLPQILMDKYHLLSRRQAVRAMHFPKDL 197
Query: 442 DEADLARKRLIFDE--FFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSS 499
+E A +R+ F+E FF LQL L + +G +G++ + + +L A
Sbjct: 198 EEYKQALRRVKFEELLFFQLQLQVLKEENRSVG-----QGIVLDWDEKKLKA-------- 244
Query: 500 LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
L +LP++LT +Q ++SEI+ D++ P MNRLLQGDVG GKTVVA LA + +
Sbjct: 245 ----LQASLPFALTEAQEKSLSEILADMRSPYHMNRLLQGDVGSGKTVVAGLAMYAAVTA 300
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
G QAA MVPTE+LA QH + L L N+ +I LLTGS + R + +QTG
Sbjct: 301 GKQAALMVPTEILAEQHLQSLTSLFSNL-------RILLLTGSLKAAERRERLELIQTGQ 353
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
+ LV+GTH+LI E V F L L I+DEQ RFGV QR K
Sbjct: 354 VDLVVGTHALIQEGVHFHDLGLVIIDEQHRFGVAQRRILREK------------------ 395
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
P VL M+ATPIPRTLA+ +GDM ++ I +P GR I T ++ +
Sbjct: 396 -----GQNPDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKEIITRWVKHQQ 445
>gi|256397125|ref|YP_003118689.1| ATP-dependent DNA helicase RecG [Catenulispora acidiphila DSM
44928]
gi|256363351|gb|ACU76848.1| ATP-dependent DNA helicase RecG [Catenulispora acidiphila DSM
44928]
Length = 746
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 158/535 (29%), Positives = 250/535 (46%), Gaps = 95/535 (17%)
Query: 227 NCGFYTLRKLLHHFPRTYADLQNAQI----DLDDGQYFIFIGEI--ISSRGMKAGCSFSF 280
G T+ LL H+PR Y ++ ++ +L+ G + ++ +S R M A
Sbjct: 24 GLGLDTVGDLLRHYPRKY--VKRGELTELSELEPGTEATIVAQVTKVSRRSMAARRGQ-- 79
Query: 281 LEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVG 340
++ E+ D T+ E+ + + + F G KVG
Sbjct: 80 ---MMTVEVRDAADTAV-EITFFNPRAANALKPGMLGMFAG----------------KVG 119
Query: 341 EFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDT 400
E+ GK++ + E + + D D G P+YPS GGL + +
Sbjct: 120 EY---HGKIQL----TNPEFAKLDADTEDAGDSPIDNWAGELMPLYPSTGGLPSWKIARC 172
Query: 401 IARALQALPANF--DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFY 458
+ + L A+ DP+P+ + GLL L +A+ IH+P E +ARKRL +DE
Sbjct: 173 VRMVIDQLDADIEDDPMPRPVRARQGLLTLTEAFRRIHRPDDWPEIAVARKRLKWDEALP 232
Query: 459 LQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLS 518
+Q+ L Q E L L + R+ ++ + + ALP++LT+ Q
Sbjct: 233 MQV-VLAQRREALKA-------LPAVPRRRVPGGLLDAFDA-------ALPFTLTAGQRQ 277
Query: 519 AISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYE 578
EI DL PM+RLLQGDVG GKT+VA A + V+ +G QA + PTE+LA QH+
Sbjct: 278 VGEEIEADLASEHPMHRLLQGDVGSGKTMVALRAMLAVVDAGGQAVMLAPTEVLAQQHHR 337
Query: 579 HLLKLLDN-------------------MEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
++++L + ++ + ++ALLTGS K R D +G
Sbjct: 338 SIVQMLGAGADVPMDLFSETAAPDAAPFDPNRKRVRVALLTGSQNAKDRRTNLLDAASGT 397
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
+VIGTH++I + V+F+ L L +VDEQ RFGV QR +K D
Sbjct: 398 AGIVIGTHAVIQDHVQFADLGLVVVDEQHRFGVEQRDALRAK-------------GED-- 442
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
PHVL M+ATPIPRT+A+ ++GD+ + +++LP GR PI T+++ +E
Sbjct: 443 -------PPHVLVMTATPIPRTVAMTVFGDLETSVLSELPAGRSPIATHVVAAHE 490
>gi|89902448|ref|YP_524919.1| ATP-dependent DNA helicase RecG [Rhodoferax ferrireducens T118]
gi|89347185|gb|ABD71388.1| ATP-dependent DNA helicase RecG [Rhodoferax ferrireducens T118]
Length = 747
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 150/395 (37%), Positives = 204/395 (51%), Gaps = 56/395 (14%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANF---DPVPKEITQEFGL---LCLFDAYMGIHQ 437
PIYP+ GL + LR RA+Q A D VP E E GL + +A + +H
Sbjct: 146 PIYPTVAGLPQAYLR----RAVQGGVARAELSDTVPLENLCEIGLQPSWNMRNALLFLHN 201
Query: 438 PKH-------IDEADLARKRLIFDEFFYL---------QLGRLY------QMLEGLGTQF 475
P D + A +RL +E + RL Q L+ L
Sbjct: 202 PTPEVALATLQDHSHPAWQRLKAEELLAQQLSQLQAKRERARLRAPVLHSQALDDLVDDA 261
Query: 476 EKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNR 535
G D KP L SL +LL LP+ LT++Q +EI DL +PVPM+R
Sbjct: 262 HAAGRRDARLKPGLP-------GSLRNRLLATLPFQLTAAQHRVSAEIARDLARPVPMHR 314
Query: 536 LLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPK 595
LLQGDVG GKTVVA LA I +G+Q A M PTE+LATQH+ L+ L+ + +
Sbjct: 315 LLQGDVGSGKTVVAALAAAICIDAGWQCALMAPTEILATQHFAKLVSWLEPL-----GIR 369
Query: 596 IALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQR 655
+A LTGS K+ R + + +G+ LVIGTH++I +KV+F L LAI+DEQ RFGV QR
Sbjct: 370 VAWLTGSQKAKERREMLALIASGEAGLVIGTHAVIQDKVQFKNLALAIIDEQHRFGVAQR 429
Query: 656 GRFNSKLY----YTSMSSGMAMVNSDGSPKDDQH------MAPHVLAMSATPIPRTLALA 705
SKL + + G A +S +D + PH+L M+ATPIPRTLA++
Sbjct: 430 LALRSKLSAQTDHPELVEGPAAASSLRQAQDQPSSVRTVGLEPHLLMMTATPIPRTLAMS 489
Query: 706 LYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENV 740
Y D+ ++ I +LPPGR PI T ++ N+ E V
Sbjct: 490 YYADLDVSTIDELPPGRTPIITKVV--NDARREEV 522
>gi|418967961|ref|ZP_13519591.1| ATP-dependent DNA helicase RecG [Streptococcus mitis SK616]
gi|383341674|gb|EID19927.1| ATP-dependent DNA helicase RecG [Streptococcus mitis SK616]
Length = 671
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 161/533 (30%), Positives = 255/533 (47%), Gaps = 101/533 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ DL+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLDLEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWS 498
+ E A +R+ F+E FY Q+ L+ L ++ + GL+ + + ++ A
Sbjct: 197 LAEYKQALRRIKFEELFYFQM-----QLQTLKSENRVQGSGLVLNWSQEKVTAVK----- 246
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
LP++LTS+Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA +
Sbjct: 247 -------ENLPFALTSAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMYATVT 299
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+GYQ+A MVPTE+LA QH+E L L ++ K+ALLTGS + R + + + G
Sbjct: 300 AGYQSALMVPTEILAEQHFESLKSLFPDL-------KLALLTGSLKAAEKREVLETIAKG 352
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+ L+IGTH+LI + V+++ L L I+DEQ RFGV QR K D
Sbjct: 353 EADLIIGTHALIQDGVDYARLGLIIIDEQHRFGVGQRRVLREK--------------GDN 398
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 ---------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|168484888|ref|ZP_02709833.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae
CDC1873-00]
gi|418176483|ref|ZP_12813074.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA41437]
gi|418219424|ref|ZP_12846089.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae NP127]
gi|418239221|ref|ZP_12865772.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|419460509|ref|ZP_14000437.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA02270]
gi|419462859|ref|ZP_14002762.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA02714]
gi|172041962|gb|EDT50008.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae
CDC1873-00]
gi|353840554|gb|EHE20618.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA41437]
gi|353873784|gb|EHE53643.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae NP127]
gi|353892212|gb|EHE71961.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|379530291|gb|EHY95531.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA02714]
gi|379530645|gb|EHY95884.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA02270]
Length = 671
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 161/533 (30%), Positives = 255/533 (47%), Gaps = 101/533 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWS 498
+ E A +R+ F+E FY Q+ L+ L ++ + GL+ + + ++ A +
Sbjct: 197 LAEYKQALRRIKFEELFYFQM-----QLQTLKSENRVQGSGLVLNWSQEKVTAVKV---- 247
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
+LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA +
Sbjct: 248 --------SLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVT 299
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+GYQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G
Sbjct: 300 AGYQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLQTIAKG 352
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+ L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 353 EADLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN 398
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR I T I+
Sbjct: 399 ---------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKSIVTRWIK 442
>gi|148994014|ref|ZP_01823370.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae SP9-BS68]
gi|168488586|ref|ZP_02712785.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae SP195]
gi|417679660|ref|ZP_12329056.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA17570]
gi|418126347|ref|ZP_12763252.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA44511]
gi|418192135|ref|ZP_12828637.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47388]
gi|418214891|ref|ZP_12841625.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA54644]
gi|418234894|ref|ZP_12861470.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA08780]
gi|419484924|ref|ZP_14024699.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA43257]
gi|419508793|ref|ZP_14048444.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA49542]
gi|421220779|ref|ZP_15677618.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2070425]
gi|421223034|ref|ZP_15679816.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2070531]
gi|421279471|ref|ZP_15730277.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA17301]
gi|421294713|ref|ZP_15745434.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA56113]
gi|147927481|gb|EDK78509.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae SP9-BS68]
gi|183572842|gb|EDT93370.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae SP195]
gi|332072525|gb|EGI83008.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA17570]
gi|353795411|gb|EHD75759.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA44511]
gi|353855221|gb|EHE35191.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA47388]
gi|353869621|gb|EHE49502.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA54644]
gi|353886516|gb|EHE66298.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA08780]
gi|379581677|gb|EHZ46561.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA43257]
gi|379610747|gb|EHZ75477.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA49542]
gi|395586689|gb|EJG47056.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2070425]
gi|395587014|gb|EJG47376.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae 2070531]
gi|395878964|gb|EJG90026.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA17301]
gi|395893282|gb|EJH04269.1| ATP-dependent DNA helicase RecG [Streptococcus pneumoniae GA56113]
Length = 671
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 161/533 (30%), Positives = 255/533 (47%), Gaps = 101/533 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWS 498
+ E A +R+ F+E FY Q+ L+ L ++ + GL+ + + ++ A +
Sbjct: 197 LAEYKQALRRIKFEELFYFQM-----QLQTLKSENRVQGSGLVLNWSQEKVTAVKV---- 247
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
+LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA +
Sbjct: 248 --------SLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVT 299
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+GYQAA MVPTE+LA QH+E L L N+ K+ALLTGS + R + + + G
Sbjct: 300 AGYQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLQTIAKG 352
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+ L+IGTH+LI + VE++ L L I+DEQ RFGV QR K D
Sbjct: 353 EADLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN 398
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR I T I+
Sbjct: 399 ---------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKSIVTRWIK 442
>gi|406577896|ref|ZP_11053475.1| ATP-dependent DNA helicase RecG [Streptococcus sp. GMD6S]
gi|404458962|gb|EKA05339.1| ATP-dependent DNA helicase RecG [Streptococcus sp. GMD6S]
Length = 671
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 163/533 (30%), Positives = 258/533 (48%), Gaps = 101/533 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + + GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAIFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQAGLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWS 498
+ E A +R+ F+E FY Q+ L+ L ++ + GL+ + K ++ A
Sbjct: 197 LAEYKQALRRIKFEELFYFQM-----QLQTLKSENRVQGSGLVLNWSKEKVTA------- 244
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
TK+ LP++LTS+Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA +
Sbjct: 245 --TKE---NLPFALTSAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVT 299
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+GYQAA MVPTE+LA QH+E L L ++ K+ALLTGS + R + + + G
Sbjct: 300 AGYQAALMVPTEILAEQHFESLQNLFPDL-------KLALLTGSLKAAEKREVLETIAKG 352
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+ L+IGTH+LI + V+++ L L I+DEQ RFGV QR K D
Sbjct: 353 EADLIIGTHALIQDGVDYARLGLIIIDEQHRFGVGQRRILREK--------------GDN 398
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 ---------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPVGRKPIVTRWIK 442
>gi|384168476|ref|YP_005549854.1| ATP-dependent DNA helicase RecG [Bacillus amyloliquefaciens XH7]
gi|341827755|gb|AEK89006.1| ATP-dependent DNA helicase RecG [Bacillus amyloliquefaciens XH7]
Length = 660
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 142/411 (34%), Positives = 213/411 (51%), Gaps = 65/411 (15%)
Query: 328 PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKD---EDDLSLRAKGRPYP 384
P+LK K +G V +SGK R ++ LK+ ++D S+ P
Sbjct: 78 PYLKK---KLTLGSVVTISGKWDKHRQT-------VSVQELKNGPHQEDKSIE------P 121
Query: 385 IYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
+Y K + ++R I AL+ N DP+P+++ + L A +HQP+ +
Sbjct: 122 VYSVKENVTVKMMRRFIKEALKHHLDNIADPLPEKLRISYKLPDYKQALQTMHQPETRES 181
Query: 444 ADLARKRLIFDEFFYLQLG-RLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTK 502
AR+R +++EF QL + ++ E + + +G+ + +L A
Sbjct: 182 LQQARRRFVYEEFLLFQLKMQAFRKAE----REQSKGISHVFPAEKLAA----------- 226
Query: 503 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 562
+LP+SLT++Q+ + EI DL P MNRLLQGDVG GKT VA + I SGYQ
Sbjct: 227 -FTASLPFSLTNAQMRVLREITADLTSPYRMNRLLQGDVGSGKTAVAAITLYAAILSGYQ 285
Query: 563 AAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITL 622
A MVPTE+LA QH + L+ L N ED + IALLT S K+ R + + L G+I +
Sbjct: 286 GALMVPTEILAEQHADSLVSLFAN--EDVN---IALLTSSVKGKRRRELLERLALGEIDI 340
Query: 623 VIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKD 682
++GTH+LI ++VEF AL L I DEQ RFGV QR + +K
Sbjct: 341 LVGTHALIQDEVEFKALSLVITDEQHRFGVDQRKKLRNK--------------------- 379
Query: 683 DQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN 733
P VL M+ATPIPRTLA+ ++G+M ++ I ++P GR I+TY ++ +
Sbjct: 380 --GQDPDVLFMTATPIPRTLAITVFGEMDVSVIDEMPAGRKQIETYWVKHD 428
>gi|84498316|ref|ZP_00997113.1| putative ATP-dependent DNA helicase [Janibacter sp. HTCC2649]
gi|84381816|gb|EAP97699.1| putative ATP-dependent DNA helicase [Janibacter sp. HTCC2649]
Length = 735
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 160/545 (29%), Positives = 247/545 (45%), Gaps = 91/545 (16%)
Query: 206 LLDKCISCVPGLSKRLYHQLENC-GFYTLRKLLHHFPRTY----ADLQNAQIDLDDGQYF 260
+ D+ L KR + ++ G T+ LL ++PR Y ++L A+I G Y
Sbjct: 1 MYDESTPLTKVLDKREAKKFKDARGIETVGDLLAYWPRRYQSPESNLAAARI----GSYI 56
Query: 261 IFIGEI--ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKF 318
+ + E+ ++R MK VI T G + + I
Sbjct: 57 VAVAEVKTATTRSMKNRRGRMLQAVI----------TDGSKDLEI--------------- 91
Query: 319 FRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRA 378
T F+S EGK G +GKV A NN ++ +L D D R
Sbjct: 92 ---TFFSS----HGHEGKLVPGARALFAGKVSAF--NNKLQLAHPGYSLLSDFDRGDRR- 141
Query: 379 KGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQP 438
PIY + G L+ + + + L L + + +P+++ L+ A GIH P
Sbjct: 142 --NLIPIYKAVGNLHTWTVTECVRMVLDLLDESPEAIPEDVLDRRDLVDRMAALRGIHTP 199
Query: 439 KHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWS 498
E D A KR+ ++E LQ+ L + KE L + +P
Sbjct: 200 DSRAEIDAAEKRMSYEEALILQVA-----LAQRRARQAKESTLARVPRP----------G 244
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
L + LP++LT+ Q+ + ++ + VPM+RLLQG+VG GKTV+A A + +
Sbjct: 245 GLLDAFDQRLPFTLTAGQVDIGETLATEMARDVPMHRLLQGEVGSGKTVIAVRAMLAAVD 304
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKH------KPKIALLTGSTPVKQSRMIR 612
+G QAA + PTE+LA+QH+ + +L ++ E ++ LLTGS + R
Sbjct: 305 AGGQAALLAPTEVLASQHHRSITTMLGDLAEGGMLGGSDIGTRVTLLTGSMSTQSRRKAM 364
Query: 613 KDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMA 672
D+ +GD +VIGTH+LI E V F L L +VDEQ RFGV QR K
Sbjct: 365 LDIASGDAGIVIGTHALIQEHVSFQDLALVVVDEQHRFGVEQRDALRGKAA--------- 415
Query: 673 MVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEG 732
PHVL M+ATPIPRT+A+ ++GDM + +++LP GR PI T+++
Sbjct: 416 -------------QPPHVLVMTATPIPRTVAMTVFGDMETSTLSELPAGRAPITTHVVPE 462
Query: 733 NEKGY 737
+ G+
Sbjct: 463 AKPGW 467
>gi|221064802|ref|ZP_03540907.1| ATP-dependent DNA helicase RecG [Comamonas testosteroni KF-1]
gi|220709825|gb|EED65193.1| ATP-dependent DNA helicase RecG [Comamonas testosteroni KF-1]
Length = 731
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 133/368 (36%), Positives = 192/368 (52%), Gaps = 49/368 (13%)
Query: 384 PIYPSKGGLNASLLRDTIARAL------QALPANFDPVPKEITQEFGLLCLFD---AYMG 434
P+YP+ L + LR IA AL + LP P + + GL +D A
Sbjct: 169 PVYPASASLPQAYLRRAIASALLRADLSETLPPEQSPPIAQFYGQDGLQPAYDLRNALTF 228
Query: 435 IHQPKH-------IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKP 487
+H P D + A +RL +E QL +Q+E + + R P
Sbjct: 229 LHHPTPDVALVTLEDHSHPAWQRLKAEELLAQQL-----------SQYEAKRERARLRAP 277
Query: 488 RLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTV 547
L G + LT++ L LP+ LT +Q + EI D+++ +PM+RLLQGDVG GKTV
Sbjct: 278 VLRP--QAGMADLTQQFLAQLPFGLTGAQQRVVGEIRADMERRIPMHRLLQGDVGSGKTV 335
Query: 548 VAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQ 607
VA L+ + I +G+Q A M PTE+LA QH+ L+ L+ + K K+A L G+ K+
Sbjct: 336 VAALSAVACIEAGWQCALMAPTEILAEQHFGKLVGWLEPILAPLGK-KVAWLAGAQKKKE 394
Query: 608 SRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSM 667
+ +++G+ LV+GTH++I E+V+F L LA++DEQ RFGV QR KL T M
Sbjct: 395 RAAMLALVESGEAALVVGTHAVIQEQVQFKNLALAVIDEQHRFGVAQRLALRQKLAATGM 454
Query: 668 SSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
PH+L MSATPIPRTLA++ Y D+ ++ I +LPPGR PI T
Sbjct: 455 E-------------------PHLLMMSATPIPRTLAMSYYADLDVSTIDELPPGRTPIVT 495
Query: 728 YIIEGNEK 735
+I + K
Sbjct: 496 KLISDSRK 503
>gi|120403147|ref|YP_952976.1| ATP-dependent DNA helicase RecG [Mycobacterium vanbaalenii PYR-1]
gi|119955965|gb|ABM12970.1| ATP-dependent DNA helicase RecG [Mycobacterium vanbaalenii PYR-1]
Length = 752
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 154/528 (29%), Positives = 246/528 (46%), Gaps = 72/528 (13%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIV 285
E+ G T+ LL +FPR Y+D + + +D ++ G +F++VI
Sbjct: 22 EHLGLRTVNDLLRYFPRKYSDAMTVRGEGED---------------LEVGEHVTFVDVID 66
Query: 286 GCEIADTETTSGDEVVNI---DSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEF 342
E+ E + + D K K+ + T + S E + G
Sbjct: 67 AAELKRVRNQPSREFLVVTLRDRRPKVTATFFNPKYLKNTLVEGAKVMLSGEVGYYRGTM 126
Query: 343 VCVSGKVRAMRSNNHYEMREYNIDVLKDE-----DDLSLRAKGRPYPIYPSKGGLNASLL 397
+ S + ++ ++ + D+L + +PIY G A +
Sbjct: 127 QLTHPAFMVLNSASGKKIGTKSLTSVASTTDATGDELLAEFEKDYFPIY----GATAKVQ 182
Query: 398 RDTIARALQALPANFDPVPKEI----TQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIF 453
I ++ + A DPVP+ + +E L+ +A +H ++ ++ D A +RL F
Sbjct: 183 TWDIYACVRQMLAVLDPVPETLPEWFVREHNLMSEDEALRAVHLSENAEDRDRAIERLTF 242
Query: 454 DEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLT 513
DE LQ G + + ++ G K R L AA M LP+ LT
Sbjct: 243 DEAVGLQWGLVVRR----HSELSASGPPAKRRGDGLMAAMMA-----------QLPFELT 287
Query: 514 SSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLA 573
+ Q + I +L P PMNR+LQG+VG GKTVV+ LA +++I +GYQ A + PTE+LA
Sbjct: 288 TGQREVLEVISAELSAPRPMNRMLQGEVGSGKTVVSLLAMLQMIDAGYQCALLAPTEVLA 347
Query: 574 TQHYEHLLKLLDNMEE------DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTH 627
QH + +L + + ++ALLTGS +Q R R+++ +G+ +VIGTH
Sbjct: 348 AQHALSIRSMLGPLATAGELGGADNATRVALLTGSMTAQQKRDARREVASGEAGIVIGTH 407
Query: 628 SLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMA 687
+L+ + VEF L + +VDEQ RFGV QR R +K +P + +
Sbjct: 408 ALLQDTVEFDNLGMVVVDEQHRFGVEQRDRLRAK-----------------AP---EGIT 447
Query: 688 PHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
PH+L M+ATPIPRT+AL +YGD+ + + +LP GR PI T I +K
Sbjct: 448 PHLLVMTATPIPRTVALTIYGDLETSILRELPRGRQPITTNTIFQTQK 495
>gi|393779629|ref|ZP_10367867.1| ATP-dependent DNA helicase RecG [Capnocytophaga sp. oral taxon 412
str. F0487]
gi|392609949|gb|EIW92744.1| ATP-dependent DNA helicase RecG [Capnocytophaga sp. oral taxon 412
str. F0487]
Length = 704
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 127/355 (35%), Positives = 194/355 (54%), Gaps = 57/355 (16%)
Query: 384 PIYPS-----KGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQ 437
P+YPS K + ++R + + + +F + +P I L+ +A IH
Sbjct: 154 PVYPSTEKLAKRNITNRVMRQLVQTVFEEIGNSFAENLPDNILASMNLISKQEAMRNIHF 213
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYR---KP--RLNAA 492
P A RL F+E FY+Q+ Q ++ LL K + +P + A
Sbjct: 214 PTDQTLLTKASVRLKFEELFYIQV------------QLVRKNLLHKQKFQGQPFKDVGDA 261
Query: 493 YMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLA 552
+M ++ LP+ LT +Q + EI D+ MNRLLQGDVG GKT+VA +
Sbjct: 262 FMNFYN-------HHLPFPLTDAQKRVLKEIRADVGSNAQMNRLLQGDVGSGKTIVALMT 314
Query: 553 CMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIR 612
+ + +G QA M PTE+LA QHY+++ +LL + +ALLTGS+ K+ +M+
Sbjct: 315 MLLAVDNGCQACLMAPTEILANQHYQNISELL-----KETGVTVALLTGSSKTKERKMLD 369
Query: 613 KDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMA 672
+ LQ+G+++++IGTH+L+ KV+F L LAI+DEQ RFGV QR SKL++ +
Sbjct: 370 EQLQSGELSILIGTHALLENKVQFRNLGLAIIDEQHRFGVEQR----SKLWHKNT----- 420
Query: 673 MVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+ PH+L M+ATPIPRTLA+++YGD+ ++ I +LPPGR PIKT
Sbjct: 421 -------------IPPHILVMTATPIPRTLAMSVYGDLDVSIIDELPPGRKPIKT 462
>gi|410460755|ref|ZP_11314428.1| ATP-dependent DNA helicase RecG [Bacillus azotoformans LMG 9581]
gi|409926685|gb|EKN63841.1| ATP-dependent DNA helicase RecG [Bacillus azotoformans LMG 9581]
Length = 681
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 160/531 (30%), Positives = 245/531 (46%), Gaps = 91/531 (17%)
Query: 206 LLDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIG 264
+L K I + G+ + L G YT+ +LL +FP Y D + + D+ + G
Sbjct: 3 ILSKEIIEIKGIGEETALSLNELGIYTIVQLLEYFPYRYEDYRICNLGDIKHDERITVEG 62
Query: 265 EIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKK---IYLHLKKFFRG 321
++ S S +F G+KK I + + +
Sbjct: 63 KVHSE------PSLTFY------------------------GRKKSRLLIRVFVNQLLIS 92
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGR 381
F + P+LK + +G+ V ++GK R +VLK S+ K +
Sbjct: 93 VVFFNQPYLKK---QITIGDTVTITGKWDQHRQT-------ITGNVLKKG---SVIRKQQ 139
Query: 382 PYPIYPSKGGLNASLLRDTIARALQALPANFD-PVPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y +G + ++ ++ L D P+P I + + LL +A IH P
Sbjct: 140 FEPVYSVRGKITVKGMQRLLSLGLHQYGEYIDDPLPSSILKRYKLLSKKEAIFQIHCPTS 199
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ AR+RL+++EF QL K L K+ + + E
Sbjct: 200 PEHLKQARRRLVYEEFLLFQL---------------KMQALRKFEREQSGGVAHEFSIGT 244
Query: 501 TKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 560
+ + +LP+ LT++Q + EI+ DL P MNRLLQGDVG GKTVVA +A +G
Sbjct: 245 VNQFINSLPFPLTNAQKRVVDEILNDLSSPYRMNRLLQGDVGSGKTVVAAIALYASKCAG 304
Query: 561 YQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
+Q A MVPTE+LA QH L +L + K K ALLT S K+ + I + L+ G I
Sbjct: 305 FQGALMVPTEILAEQHAASLSSIL-----EPQKIKTALLTSSVKGKKRQEILEQLKNGQI 359
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
++IGTH+LI ++V F+ L L I DEQ RFGV QR ++ G
Sbjct: 360 DILIGTHALIQDEVNFNKLGLVITDEQHRFGVEQR----------------RILREKGE- 402
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
+P VL M+ATPIPRTLA+ ++GDM ++ I ++P GR I+TY ++
Sbjct: 403 ------SPDVLFMTATPIPRTLAITVFGDMDVSVIDEMPAGRKQIETYWVK 447
>gi|319404154|emb|CBI77747.1| ATP-dependent DNA helicase [Bartonella rochalimae ATCC BAA-1498]
Length = 701
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 140/351 (39%), Positives = 185/351 (52%), Gaps = 49/351 (13%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
PIYPS GL+ LR +AL +P+ + + + I +E + IH P + D+
Sbjct: 159 PIYPSTAGLSTKTLRRATKKALDFIPSLPEWIEESIKKEHNFSSFAVSLRRIHDPINPDD 218
Query: 444 ADL---ARKRLIFDEFFYLQLGRLYQMLEGLG-TQFEKEGLLDKYRKPRLNAAYMEGWSS 499
L ARKRL +DEFF Q+ LG + E + L R P AY
Sbjct: 219 LTLESTARKRLAYDEFFANQIA--------LGLVRLETKSLSGTSRPP--TGAY------ 262
Query: 500 LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
TKKLL LP+ LT+ Q+ AI +I DL P PM RLLQGDVG GKTVVA +A ++ +
Sbjct: 263 -TKKLLEILPFQLTNGQIKAIKDIENDLASPEPMLRLLQGDVGTGKTVVALMAIAQIAEN 321
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
Q+A MVPTE+LA QH+ + L +K + ALLTG K I + +G+
Sbjct: 322 SGQSALMVPTEVLARQHFATIAPL-----AEKIGLQTALLTGREKGKVRAKILDTILSGE 376
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
+++IGTH+LI E V ++ L LAI+DEQ RFGV QR +K G+
Sbjct: 377 ASIIIGTHALIQEHVTYNNLALAIIDEQHRFGVHQRLTLTAK----------------GN 420
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
P +L M+ATPIPRTL L YGDM ++ITD P GR PI T I
Sbjct: 421 -------KPDMLVMTATPIPRTLILTSYGDMDASKITDKPIGRNPITTATI 464
>gi|419778517|ref|ZP_14304404.1| ATP-dependent DNA helicase RecG [Streptococcus oralis SK10]
gi|383186939|gb|EIC79398.1| ATP-dependent DNA helicase RecG [Streptococcus oralis SK10]
Length = 671
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 162/533 (30%), Positives = 254/533 (47%), Gaps = 101/533 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQAGLVKVIKTAFDQGLDLLIEENLPQSFLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWS 498
+ E A +R+ F+E FY Q+ L+ L ++ + GL+ + K ++ AA
Sbjct: 197 LAEYKQALRRIKFEELFYFQM-----QLQTLKSENRVQGSGLVLNWSKEKVTAAK----- 246
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA +
Sbjct: 247 -------ENLPFALTPAQEKSLQEILADMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVT 299
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+GYQAA MVPTE+LA QH+E L L ++ K+ALLTGS + R + + + G
Sbjct: 300 AGYQAALMVPTEILAEQHFESLQNLFPDL-------KLALLTGSLKAAEKREVLETIAKG 352
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+ L+IGTH+LI + V+++ L L I+DEQ RFGV QR K D
Sbjct: 353 EADLIIGTHALIQDGVQYARLGLIIIDEQHRFGVGQRRILREK--------------GDN 398
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 ---------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|386758310|ref|YP_006231526.1| ATP-dependent DNA helicase RecG [Bacillus sp. JS]
gi|384931592|gb|AFI28270.1| ATP-dependent DNA helicase RecG [Bacillus sp. JS]
Length = 682
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 161/551 (29%), Positives = 249/551 (45%), Gaps = 135/551 (24%)
Query: 210 CISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISS 269
I+ + G+ L G Y + LL++FP Y D
Sbjct: 8 SIANIKGIGPETEKTLHELGIYDISDLLNYFPYRYDD----------------------- 44
Query: 270 RGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSG----------QKKKIYLHLKKFF 319
E+ D E + DE V ++ KK+ L +
Sbjct: 45 -----------------YELRDLEEVAHDERVTVEGKVHSEPSLTYYGKKRNRLTFRVLV 87
Query: 320 RGTRFTSI----PFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKD---ED 372
T++ P+LK K +G V VSGK R ++ LK+ ++
Sbjct: 88 GNYLITAVCFNRPYLKK---KLSLGSVVTVSGKWDKHRQT-------ISVQELKNGPHQE 137
Query: 373 DLSLRAKGRPYPIYPSKGGLNASLLRDTIARAL----QALPANFDPVPKEITQEFGLLCL 428
D S+ P+Y K + ++R I +AL ++LP DP+P+++ + + L
Sbjct: 138 DKSIE------PVYSVKENVTVKMMRRFIQQALTQYAESLP---DPLPEKLRKSYKLPDY 188
Query: 429 FDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRL------YQMLEGLGTQFEKEGLLD 482
+ A +HQP+ + LAR+R +++EF QL + +G+ F E L+
Sbjct: 189 YQALKAMHQPETREALKLARRRFVYEEFLLFQLKMQAFRKAEREQTQGIRQVFSNEELM- 247
Query: 483 KYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVG 542
+ +++LP+ LT++Q + EI D+ P MNRLLQGDVG
Sbjct: 248 --------------------RFIKSLPFPLTNAQSRVLREITADMSSPYRMNRLLQGDVG 287
Query: 543 CGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGS 602
GKT VA +A I SGYQ A MVPTE+LA QH + L+ L +K +ALLT S
Sbjct: 288 SGKTAVAAIALYAAILSGYQGALMVPTEILAEQHADSLVSLF-----EKWDVSVALLTSS 342
Query: 603 TPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKL 662
K+ + + + L G+I +++GTH+LI ++VEF AL L I DEQ RFGV QR + +K
Sbjct: 343 VKGKRRKELLERLAAGEIDILVGTHALIQDEVEFKALSLVITDEQHRFGVEQRKKLRNK- 401
Query: 663 YYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGR 722
P VL M+ATPIPRTLA+ ++G+M ++ I ++P GR
Sbjct: 402 ----------------------GQDPDVLFMTATPIPRTLAITVFGEMDVSVIDEMPAGR 439
Query: 723 IPIKTYIIEGN 733
I+TY ++ +
Sbjct: 440 KQIETYWVKHD 450
>gi|239991053|ref|ZP_04711717.1| ATP-dependent DNA helicase RecG [Streptomyces roseosporus NRRL
11379]
gi|291448054|ref|ZP_06587444.1| ATP-dependent DNA helicase RecG [Streptomyces roseosporus NRRL
15998]
gi|291351001|gb|EFE77905.1| ATP-dependent DNA helicase RecG [Streptomyces roseosporus NRRL
15998]
Length = 734
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 151/531 (28%), Positives = 237/531 (44%), Gaps = 92/531 (17%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQ--NAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEV 283
E+ +T+ LLHH+PR Y + A DL ++ + ++ +R
Sbjct: 22 EHLDLHTVGDLLHHYPRRYEERGKLTALADLPLDEHVTVVAQVADAR------------- 68
Query: 284 IVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKV---G 340
++ ++G+ K++ + L R + F + HK G
Sbjct: 69 ----------------ILTFNNGRGKRLEVTLTDG--SGRLQLVFFGHGVHKPHKELLPG 110
Query: 341 EFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRA---KGRPYPIYPSKGGLNASLL 397
+GKV Y + D D+ + GR PIYP+ L++ +
Sbjct: 111 RQAMFAGKVSVFNRKMQLAHPTYQLLDASDADEATEAVDAFAGRLLPIYPACKQLDSWRI 170
Query: 398 RDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFF 457
+ L + DP+P + + G L +A + +H+P+ + + A+ RL +DE F
Sbjct: 171 AKAVDAVLPSAQDAVDPLPASLREGRGFTPLPEALLKVHRPQTKADIEDAKARLKWDEAF 230
Query: 458 YLQLG---RLY--QMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSL 512
LQ+ R Y L + +GLLD + LP++L
Sbjct: 231 VLQVALARRRYADTQLPAAARRPVADGLLDAFDA--------------------KLPFTL 270
Query: 513 TSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELL 572
T Q EI DL PM+RLLQG+VG GKT+VA A + V+ +G QAA + PTE+L
Sbjct: 271 TEGQEKVSKEIFDDLATEHPMHRLLQGEVGSGKTMVALRAMLAVVDAGGQAAMLAPTEVL 330
Query: 573 ATQHYEHLLKLLDNMEE------DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGT 626
A QH+ + +++ + E + K+ LLTGS R DL TG+ +VIGT
Sbjct: 331 AQQHHRSITEMMGELAEGGMLGGSEQGTKVVLLTGSMGTAARRQALLDLVTGEAGIVIGT 390
Query: 627 HSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHM 686
H+LI +KV+F L L +VDEQ RFGV QR SK
Sbjct: 391 HALIEDKVQFHDLGLVVVDEQHRFGVEQRDALRSK----------------------GKQ 428
Query: 687 APHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGY 737
PH+L M+ATPIPRT+A+ ++GD+ + + LP GR PI ++++ +K +
Sbjct: 429 PPHLLVMTATPIPRTVAMTVFGDLETSVLDQLPAGRSPIASHVVPAKDKPH 479
>gi|203284487|ref|YP_002222227.1| DNA recombinase [Borrelia duttonii Ly]
gi|203288021|ref|YP_002223036.1| DNA recombinase [Borrelia recurrentis A1]
gi|201083930|gb|ACH93521.1| DNA recombinase [Borrelia duttonii Ly]
gi|201085241|gb|ACH94815.1| DNA recombinase [Borrelia recurrentis A1]
Length = 687
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 168/539 (31%), Positives = 257/539 (47%), Gaps = 98/539 (18%)
Query: 214 VPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQY----FIFIGEIISS 269
+ GL R +L N +++L+ ++P+ Y D +N D Q + I +I
Sbjct: 13 INGLGSRGIDRLNNIRITNVKELIEYYPKKYEDRKNMAAFPDPLQVRICELMTIFTVIEH 72
Query: 270 RGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPF 329
R G +F I+G +E + E++ + ++I+ +KF+ RF+ +
Sbjct: 73 RDF--GNTFKRNLKIIG----RSENSELFEILLFNRSFLERIFKIGQKFYIYARFSYNDY 126
Query: 330 LKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSK 389
K + C SN E+ YN K + P+Y
Sbjct: 127 TKM---------WSC---------SNFDSEIFSYNPVKFK-----------KIMPVYSLS 157
Query: 390 GGLNASLLRDTIARALQALPANF--DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA 447
GL++ + + AL A F +PK + ++ LL L +A IH P ++ A
Sbjct: 158 EGLSSKKISSYVKGAL-AYFVKFGQSDIPKFLINKYSLLSLHEALNEIHFPSSLEMLRRA 216
Query: 448 RKRLIFDEFFYLQL---GRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
+K L++ E F LQ G+ Y++ + + N + + L K++
Sbjct: 217 KKTLVYREIFLLQFFSRGKSYRV----------------FLRAEKNLS-----NDLLKQI 255
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
+ L + LT Q AI+EII DLK PMNRLLQGDVG GKT+VAFL+ + +I +GYQ A
Sbjct: 256 ISKLSFELTRDQKIAITEIINDLKNNKPMNRLLQGDVGSGKTLVAFLSSIPLIEAGYQVA 315
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
FMVPT+LLA QHY L +L + + + LLTGS K + + +Q+G +LVI
Sbjct: 316 FMVPTDLLARQHYNSLTNILKDFD-----ISVVLLTGSLKKKDRDEVLEKIQSGICSLVI 370
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH++ ++ +F L I+DEQ +FGV QR +K G D
Sbjct: 371 GTHAIFSQGTKFKNLAYVIIDEQHKFGVEQREELRNK----------------GEEVD-- 412
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE-GNEKGYENVYK 742
VL MSATPIPR+LAL L+GD+ ++ I P GR+P+ TY+ + GNE E VY+
Sbjct: 413 -----VLLMSATPIPRSLALTLFGDLEVSLIKRGPEGRLPVTTYLAKHGNE---EKVYE 463
>gi|409437392|ref|ZP_11264506.1| ATP-dependent DNA helicase [Rhizobium mesoamericanum STM3625]
gi|408750820|emb|CCM75662.1| ATP-dependent DNA helicase [Rhizobium mesoamericanum STM3625]
Length = 701
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 143/416 (34%), Positives = 207/416 (49%), Gaps = 60/416 (14%)
Query: 318 FFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLR 377
FFRG +E + + E V VSGK+ +Y + + ++L L
Sbjct: 106 FFRGQ-------AAWLEKQLPLDEEVTVSGKIDWFNGRASMVHPDYIVKA-SEAENLPLV 157
Query: 378 AKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQ 437
PIYP GL+ LR I AL P + + + Q+ GL L DA+ G+H+
Sbjct: 158 E-----PIYPLTAGLSPKTLRKIIEAALPRTPELPEWIDSALAQKQGLPLLTDAFHGLHE 212
Query: 438 PKH---IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYM 494
P+ ID AR+RL +DEF QL L + R ++ +
Sbjct: 213 PRDPSDIDAQAPARRRLAYDEFLAGQLSLS----------------LVRQRLRKVTGQPV 256
Query: 495 EGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACM 554
L+ ++LRALP+S T SQ +AI++I+ D+ M RLLQGDVG GKT+VA +A
Sbjct: 257 HATGQLSSQILRALPFSPTKSQNTAIADILKDMAGEDRMLRLLQGDVGSGKTLVALMAMA 316
Query: 555 EVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKD 614
VI SG QA M PTE+LA QH+ + K + I +LTG T ++ I +
Sbjct: 317 AVIESGGQAVLMAPTEILARQHHATISKFAASA-----GLGIEVLTGRTKGREREDILER 371
Query: 615 LQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMV 674
+ +G +++GTH+L + V + L LA+VDEQ RFGV QR R +K
Sbjct: 372 IASGQAQIIVGTHALFQDSVSYRNLMLAVVDEQHRFGVHQRLRLTAK------------- 418
Query: 675 NSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
+ PH+L M+ATPIPRTL LA +GDM ++++T+ P GR PI+T +
Sbjct: 419 ----------GVTPHMLVMTATPIPRTLVLAAFGDMDVSKLTEKPAGRKPIQTITV 464
>gi|345849807|ref|ZP_08802814.1| ATP-dependent DNA helicase RecG [Streptomyces zinciresistens K42]
gi|345638788|gb|EGX60288.1| ATP-dependent DNA helicase RecG [Streptomyces zinciresistens K42]
Length = 735
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 154/523 (29%), Positives = 241/523 (46%), Gaps = 75/523 (14%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNAQI----DLDDGQYFIFIGEIISSRGMKAGCSFSFL 281
E+ G +T+ LLHH+PR Y + Q+ DL ++ + + +R S +
Sbjct: 25 EHLGLHTVGDLLHHYPRRYE--ERGQLTHLADLPMDEHVTVVAMVADARLHTFASSKAPR 82
Query: 282 EVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGE 341
E+ T+ + ++V +G ++ K GTR
Sbjct: 83 GKGQRLEVTITDGSGRLQLVFFGNG----VHKPHKDLLPGTR------------------ 120
Query: 342 FVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRA-KGRPYPIYPSKGGLNASLLRDT 400
+GKV N ++ ++L+ E + S+ + G P+YP+ L + +
Sbjct: 121 -AMFAGKVSVF--NRRLQLAHPAYELLRGEGEESVESWAGALIPLYPATAKLESWKIGKA 177
Query: 401 IARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQ 460
I L DP+P + + L+ L +A + IH+P + + AR RL +DE F LQ
Sbjct: 178 IQTVLPGAQEAVDPLPAALREGRALVTLPEALLKIHRPHTKADIEDARARLKWDEAFVLQ 237
Query: 461 LGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAI 520
+ L + +G L PR A L LP++LT Q
Sbjct: 238 VA--------LARRRHADGQLPAV--PRRPAP-----DGLLTAFDARLPFTLTEGQRKVS 282
Query: 521 SEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHL 580
+EI DL PM+RLLQG+VG GKT+VA A + V+ +G QAA + PTE+LA QH+ +
Sbjct: 283 AEIFADLATDHPMHRLLQGEVGSGKTMVALRAMLAVVDAGGQAAMLAPTEVLAQQHHRSV 342
Query: 581 LKLLDNMEED------KHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKV 634
++++ + E + K+ LLTGS R DL TG+ +VIGTH+LI +KV
Sbjct: 343 VEMMGGLAEGGMLGGAEQATKVVLLTGSMGAAARRQALLDLVTGEAGIVIGTHALIEDKV 402
Query: 635 EFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMS 694
F L L +VDEQ RFGV QR K + PH+L M+
Sbjct: 403 RFHDLGLVVVDEQHRFGVEQRDALRGK----------------------GNQPPHLLVMT 440
Query: 695 ATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGY 737
ATPIPRT+A+ ++GD+ + + LP GR PI ++++ +K +
Sbjct: 441 ATPIPRTVAMTVFGDLETSVLDQLPAGRSPIASHVVPAADKPH 483
>gi|399039377|ref|ZP_10734981.1| ATP-dependent DNA helicase RecG [Rhizobium sp. CF122]
gi|398062665|gb|EJL54435.1| ATP-dependent DNA helicase RecG [Rhizobium sp. CF122]
Length = 701
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 146/424 (34%), Positives = 213/424 (50%), Gaps = 64/424 (15%)
Query: 318 FFRGTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLR 377
FFRG +E + + E V VSGK+ +Y + + ++L L
Sbjct: 106 FFRGQ-------AAWLEKQLPLDEEVTVSGKIDWFNGRASMVHPDYIVKA-SEAENLPLV 157
Query: 378 AKGRPYPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQ 437
PIYP GL+ LR I AL P + + + Q+ GL + DA+ G+H+
Sbjct: 158 E-----PIYPLTAGLSPKTLRKIIEAALPRTPELPEWIDLALAQKQGLPSISDAFHGLHE 212
Query: 438 PKHIDEADL-----ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAA 492
P+ D +DL AR+RL +DEF QL L + R ++
Sbjct: 213 PR--DPSDLDAQAPARRRLAYDEFLAGQLSLS----------------LVRQRLRKVTGQ 254
Query: 493 YMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLA 552
+ ++K++L+ALP+S T+SQ +AI++I+ D+ M RLLQGDVG GKT+VA +A
Sbjct: 255 PVHATGQVSKQILQALPFSPTNSQNAAIADILKDMAGDDRMLRLLQGDVGSGKTLVALMA 314
Query: 553 CMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIR 612
VI SG QA M PTE+LA QH+ + K + I +LTG T ++ I
Sbjct: 315 MAAVIESGGQAVLMAPTEILARQHHATISKFAASA-----GLGIEVLTGRTKGREREDIL 369
Query: 613 KDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMA 672
+ + +G+ +VIGTH+L + V + L LA+VDEQ RFGV QR R +K
Sbjct: 370 ERIASGEAQIVIGTHALFQDSVNYRNLMLAVVDEQHRFGVHQRLRLTAK----------- 418
Query: 673 MVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEG 732
+ PH+L M+ATPIPRTL LA +GDM ++++T+ P GR PI+T I
Sbjct: 419 ------------GITPHMLVMTATPIPRTLVLAAFGDMDVSKLTEKPAGRKPIQTITIPT 466
Query: 733 NEKG 736
G
Sbjct: 467 ERTG 470
>gi|213964624|ref|ZP_03392824.1| ATP-dependent DNA helicase RecG [Corynebacterium amycolatum SK46]
gi|213952817|gb|EEB64199.1| ATP-dependent DNA helicase RecG [Corynebacterium amycolatum SK46]
Length = 716
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 136/357 (38%), Positives = 191/357 (53%), Gaps = 45/357 (12%)
Query: 381 RPY-PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPK 439
RPY PIY + G+ L + R L+ LP DP+P T E GL A G H P
Sbjct: 172 RPYLPIYRGRKGVAGIHLALYMQRILEWLPLQPDPLPA--TPE-GLTDFDSALRGAHFPS 228
Query: 440 HIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNA-AYMEGWS 498
I D+A RL +DE LQL +G + K + L A A ME
Sbjct: 229 -IAGPDIALARLKYDEALELQLA--------VGAR--------KRTQASLTAPACMEVAG 271
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
L +L R LP+SLT Q++ ++I D+ +P PMNRLL G+VG GKTVVA L ++ +
Sbjct: 272 GLRDELRRGLPFSLTDGQVAVAADIAHDMARPNPMNRLLAGEVGSGKTVVALLGMLQAVD 331
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+ Q A + PTE+LA QHY L +L E+ + LLTGS K+ R + G
Sbjct: 332 ASRQCAMLAPTEVLAQQHYRSLTAML---EQAGVAVTVRLLTGSMSTKERRATLLEAVNG 388
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+ +V+GTH+L++E VEF L L +VDEQ RFGV QR + S
Sbjct: 389 EADIVVGTHALLSEGVEFFDLGLVVVDEQHRFGVRQRDQLRS------------------ 430
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
+ M PH+L MSATPIPRT+A+ ++GD++++Q+T+LP GR I+++++ EK
Sbjct: 431 --RGRGGMTPHLLVMSATPIPRTVAMTIFGDLAVSQLTELPRGRQEIQSFVVPTLEK 485
>gi|262203090|ref|YP_003274298.1| DEAD/DEAH box helicase [Gordonia bronchialis DSM 43247]
gi|262086437|gb|ACY22405.1| DEAD/DEAH box helicase domain protein [Gordonia bronchialis DSM
43247]
Length = 752
Score = 206 bits (523), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 164/542 (30%), Positives = 249/542 (45%), Gaps = 61/542 (11%)
Query: 217 LSKRLYHQLENCGFYTLRKLLHHFPRTYADL-QNAQIDL-DDGQYFIFIGEIISSRGMKA 274
L +L L G T+ +LLH+ PR Y Q ++ +L + G+Y +G I + +
Sbjct: 12 LDAKLVTALATLGVATVGELLHYTPRRYVRQGQVSEAELPEAGEYLTIVGRITKADMIPM 71
Query: 275 -GCSFSFLEVIVGCEIADTETTSGDEV---VNIDSGQKKKIYLHLKKFFRGTRFTSIPFL 330
S FL+V V E E T + + G + + +K F + + ++
Sbjct: 72 RKRSGHFLKVTVTDEARTYEATFFNPRFIRTKLKPGARVMMAGTVKFFREQIQLSHPEWM 131
Query: 331 KSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLS---LRAKGRPY-PIY 386
+G +V R + S EM ++ D+D L RP P+Y
Sbjct: 132 VLPDGDPEVD---------RVVGSAMLTEMYAVEAELTDDQDGAGADFLAQFDRPIIPMY 182
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL 446
P+ + + + R L P D + + GL+ +A IH P+ D+
Sbjct: 183 PATRDIQTWDIWGAVRRVLAHRPQTADALSEADRNRRGLITTAEAIEKIHLPETDDDITA 242
Query: 447 ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLR 506
A RL FDE +Q + L G + AA L +L +
Sbjct: 243 ASARLKFDEALAIQTVLAQRRLAG---------------RNESAAACPHVPGGLEDRLAQ 287
Query: 507 ALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFM 566
LP+ LT+ Q + + E+ DL Q PM+RLLQG+VG GKT+V+ LA + V+ +G+Q A +
Sbjct: 288 RLPFELTAGQRTVVGELGEDLAQNRPMSRLLQGEVGSGKTLVSLLAMLRVVDNGHQCAIL 347
Query: 567 VPTELLATQHYEHLLKLLDNMEE------DKHKPKIALLTGSTPVKQSRMIRKDLQTGDI 620
PTE+LA QHY + +L ++ E + IALLTGS K R D+ TG
Sbjct: 348 APTEVLAAQHYRTMRTMLGDLAEAGELSAAEGATSIALLTGSMKTKGKRQTLLDVVTGTA 407
Query: 621 TLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSP 680
+V+GTH+L+ E VEF L + +VDEQ RFGV QR + DG
Sbjct: 408 GIVVGTHALLEENVEFFDLGMVVVDEQHRFGVEQRDVLRGR-------------GRDG-- 452
Query: 681 KDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE-GNEKGYEN 739
+ PH L M+ATPIPRT+A+ +GD+ + + +LP GR PI T ++ GNE+ E
Sbjct: 453 -----VMPHFLVMTATPIPRTVAMTAFGDLDTSVLRELPLGRQPITTNVVPMGNERWVER 507
Query: 740 VY 741
V+
Sbjct: 508 VW 509
>gi|406660453|ref|ZP_11068585.1| ATP-dependent DNA helicase recG [Cecembia lonarensis LW9]
gi|405555838|gb|EKB50844.1| ATP-dependent DNA helicase recG [Cecembia lonarensis LW9]
Length = 697
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 136/350 (38%), Positives = 188/350 (53%), Gaps = 47/350 (13%)
Query: 384 PIYPSKGGLNASLLRDT-IARALQAL-----PANFDPVPKEITQEFGLLCLFDAYMGIHQ 437
P+Y + L A L I++ ++ L P + +P +I F L+ DA IH
Sbjct: 149 PVYSTTEKLRARFLDSKGISKIMEGLIQACYPQIQETLPIDILHRFNLIPKRDALRQIHF 208
Query: 438 PKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGW 497
P++ + AR RL F+EFF++QL L L +K LN +
Sbjct: 209 PENPELLKRARFRLKFEEFFFVQLRLLKLKLT----------RTEKSHGQVLNQTEL--- 255
Query: 498 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVI 557
LTK LP+ LT +Q + E D+K MNRL+QGDVG GKT+VAF+ + I
Sbjct: 256 --LTKFYKEHLPFQLTEAQKRVVREAYGDMKSGKQMNRLIQGDVGSGKTMVAFICILIAI 313
Query: 558 GSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
SG QA M PTE+LA QHYE L + D M + IALLTGST ++I + L +
Sbjct: 314 SSGAQACLMAPTEILANQHYEGLKEYADLMGLN-----IALLTGSTKKSTRKVIHEMLLS 368
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
GD+ ++IGTH+L+ + V+F L LAIVDEQ RFGV QR + +K
Sbjct: 369 GDLHIIIGTHALLEDVVQFRNLGLAIVDEQHRFGVAQRAKLWAK---------------- 412
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
+++ PHVL M+ATPIPRTLA+ LYGD+ ++ I +LP GR PI+T
Sbjct: 413 -----NENFYPHVLVMTATPIPRTLAMTLYGDLDISVIDELPAGRKPIQT 457
>gi|225027125|ref|ZP_03716317.1| hypothetical protein EUBHAL_01381 [Eubacterium hallii DSM 3353]
gi|224955589|gb|EEG36798.1| ATP-dependent DNA helicase RecG [Eubacterium hallii DSM 3353]
Length = 682
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 160/524 (30%), Positives = 243/524 (46%), Gaps = 94/524 (17%)
Query: 214 VPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMK 273
+ G+ ++ L T+ +L+HH+PR Y E IS +K
Sbjct: 17 IKGIGEKTEKLLAKLDIETVDQLVHHYPRCYTTYP----------------EPISISEIK 60
Query: 274 AG--CSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRG---TRFTSIP 328
G CS + EIA +++ + +K K+ L G R+ ++P
Sbjct: 61 TGQRCS-------IEAEIASP--------IHLKTVRKLKLCTGLIADVSGQLFVRWFNMP 105
Query: 329 FLKSI--EGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
+L++ +G+ + + R M Y RE + +++ PIY
Sbjct: 106 YLRNTLKQGEQWIFTGTPIYKDGRLMLEQPEYCKREKYLQLMETFQ-----------PIY 154
Query: 387 PSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADL 446
P GL+ ++ A A + + +P+ + + L + A +H P +
Sbjct: 155 PLTTGLSNKTVQKAQAAAFEMYREE-EYLPETVRNYYDLEPVNTALREVHFPTGTEHLME 213
Query: 447 ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLR 506
A+KR+IFDEFF R + LE L K R+ + Y+ K+ +
Sbjct: 214 AKKRIIFDEFF-----RFFSALE-----------LVKDREEQALNHYIIPMEEPVKRFVE 257
Query: 507 ALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFM 566
LPY LT +Q ++EI D + MNRLLQGDVG GKT+VA A + +GYQAA M
Sbjct: 258 NLPYPLTGAQKKVLNEIRQDFSDTMAMNRLLQGDVGSGKTIVAMTAMYAAVLAGYQAALM 317
Query: 567 VPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGT 626
PTE+LA QHY++ +KLL + +ALLTGST K+ R I+ +G+I ++IGT
Sbjct: 318 APTEVLAEQHYQNFVKLLSPL-----GITVALLTGSTKAKEKREIKAACASGEIQILIGT 372
Query: 627 HSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHM 686
H++I + V F L + DEQ RFGV QR F M G KD
Sbjct: 373 HAVIQDDVAFDNLAFIVTDEQHRFGVKQRDAF--------MKKG----------KD---- 410
Query: 687 APHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
PHVL MSATPIPRTL + LY D+ ++ + ++P R+PIK ++
Sbjct: 411 -PHVLVMSATPIPRTLGIILYRDLDVSIMNEMPASRLPIKNSVV 453
>gi|386859814|ref|YP_006272520.1| DNA recombinase [Borrelia crocidurae str. Achema]
gi|384934695|gb|AFI31368.1| DNA recombinase [Borrelia crocidurae str. Achema]
Length = 687
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 168/539 (31%), Positives = 257/539 (47%), Gaps = 98/539 (18%)
Query: 214 VPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQY----FIFIGEIISS 269
+ GL R +L N +++L+ ++P+ Y D +N D Q + I +I
Sbjct: 13 INGLGSRGIDRLNNIRITNVKELIEYYPKKYEDRKNMAAFPDPLQVRICELMTIFTVIEH 72
Query: 270 RGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPF 329
R G +F I+G +E + E++ + ++I+ +KF+ RF+ +
Sbjct: 73 RDF--GNTFKRNLKIIG----RSENSELFEILLFNRSFLERIFKIGQKFYIYARFSYNDY 126
Query: 330 LKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSK 389
K + C SN E+ YN K + P+Y
Sbjct: 127 TKM---------WSC---------SNFDSEIFSYNPVKFK-----------KIMPVYSLS 157
Query: 390 GGLNASLLRDTIARALQALPANF--DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA 447
GL++ + + AL A F +PK + ++ LL L +A IH P ++ A
Sbjct: 158 EGLSSKKISSYVKGAL-AYFVKFGQSDIPKFLINKYSLLSLHEALNEIHFPSSLEMLRRA 216
Query: 448 RKRLIFDEFFYLQL---GRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
+K L++ E F LQ G+ Y++ + + N + + L K++
Sbjct: 217 KKTLVYREIFLLQFFSRGKSYRV----------------FLRAEKNLS-----NDLLKQI 255
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
+ L + LT Q AI+EII DLK PMNRLLQGDVG GKT+VAFL+ + +I +GYQ A
Sbjct: 256 ISKLSFELTRDQKIAITEIINDLKNNKPMNRLLQGDVGSGKTLVAFLSSIPLIEAGYQVA 315
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
FMVPT+LLA QHY L +L + + + LLTGS K + + +Q+G +LVI
Sbjct: 316 FMVPTDLLARQHYNSLTNILKDFD-----ISVVLLTGSLKKKDRDEVLEKIQSGICSLVI 370
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH++ ++ +F L I+DEQ +FGV QR +K G D
Sbjct: 371 GTHAIFSQGTKFKNLAYVIIDEQHKFGVEQREELRNK----------------GEEVD-- 412
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE-GNEKGYENVYK 742
VL MSATPIPR+LAL L+GD+ ++ I P GR+P+ TY+ + GNE E VY+
Sbjct: 413 -----VLLMSATPIPRSLALTLFGDLEVSLIKRGPEGRLPVTTYLAKHGNE---EKVYE 463
>gi|365861196|ref|ZP_09400973.1| ATP-dependent DNA helicase RecG [Streptomyces sp. W007]
gi|364009347|gb|EHM30310.1| ATP-dependent DNA helicase RecG [Streptomyces sp. W007]
Length = 737
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 152/531 (28%), Positives = 237/531 (44%), Gaps = 92/531 (17%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQ--NAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEV 283
E+ +T+ LLHH+PR Y + A DL ++ + ++ +R
Sbjct: 22 EHLDLHTVGDLLHHYPRRYEERGKLTALADLPLDEHVTVVAQVADAR------------- 68
Query: 284 IVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKV---G 340
++ ++G+ K++ + L R + F + HK G
Sbjct: 69 ----------------ILMFNNGRGKRLEVTLTDG--SGRLQLVFFGHGVHKPHKELIPG 110
Query: 341 EFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAK---GRPYPIYPSKGGLNASLL 397
+GKV Y + D D+ + GR PIYP+ L++ +
Sbjct: 111 RQAMFAGKVSVFNRKMQLAHPTYQLLDASDADEATEAVDAFAGRLLPIYPACKQLDSWRI 170
Query: 398 RDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFF 457
+ L + DP+P + + G L +A + +H+P+ + + AR RL +DE F
Sbjct: 171 AKAVDAVLPSARDAVDPLPASLREGRGFTPLPEALLKVHRPQTKADVEDARARLKWDEAF 230
Query: 458 YLQLG---RLY--QMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSL 512
LQ+ R Y L + + +GLLD + LP++L
Sbjct: 231 VLQVALARRRYADTQLPAVARRPVADGLLDAFDA--------------------KLPFTL 270
Query: 513 TSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELL 572
T Q EI DL PM+RLLQG+VG GKT+VA A + V+ +G QAA + PTE+L
Sbjct: 271 TEGQEKVSKEIFDDLATEHPMHRLLQGEVGSGKTMVALRAMLTVVDAGGQAAMLAPTEVL 330
Query: 573 ATQHYEHLLKLLDNMEE------DKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGT 626
A QH+ + +++ + E K+ LLTGS + R DL TG+ +VIGT
Sbjct: 331 AQQHHRSITEMMGELAEGGMLGGSDRGTKVVLLTGSMGMAARRQALLDLVTGEAGIVIGT 390
Query: 627 HSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHM 686
H+LI +KV F L L +VDEQ RFGV QR SK
Sbjct: 391 HALIEDKVRFHDLGLVVVDEQHRFGVEQRDALRSK----------------------GKQ 428
Query: 687 APHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGY 737
PH+L M+ATPIPRT+A+ ++GD+ + + LP GR PI ++++ +K +
Sbjct: 429 PPHLLVMTATPIPRTVAMTVFGDLETSVLDQLPAGRSPIASHVVPAKDKPH 479
>gi|256847363|ref|ZP_05552809.1| ATP-dependent DNA helicase RecG [Lactobacillus coleohominis
101-4-CHN]
gi|256716027|gb|EEU31002.1| ATP-dependent DNA helicase RecG [Lactobacillus coleohominis
101-4-CHN]
Length = 676
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 170/536 (31%), Positives = 246/536 (45%), Gaps = 100/536 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLD---DGQYFIFI 263
L +S + G+ + L G T+ LL +FP Y D A DL+ D Q
Sbjct: 4 LQDPVSTIRGVGPKTAEALTTLGIQTVEDLLTYFPSRYDDF--APTDLETAKDKQKVTIH 61
Query: 264 GEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTR 323
G I+S M F + +G + G VV + +Y +
Sbjct: 62 GTIVSEPVM---SRFGYRRTRLGFRV-----MVGHAVVQV-------VYFNQ-------- 98
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY 383
P+LK + + + V + G A R +L ++ D + A
Sbjct: 99 ----PYLKK---QAVMDQDVTIMGTWNASRQEIQ------GTKLLTNQQDQEMGA----- 140
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPV-----PKEITQEFGLLCLFDAYMGIHQP 438
IYP+ ++ + LR I A N+ V P + Q + LL +H P
Sbjct: 141 -IYPANKHVHQATLRKLIKIAYH----NYANVIATLLPISLRQRYQLLDRRTMIHDMHFP 195
Query: 439 KHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWS 498
K A AR+ ++EFF QL RL + +K+G Y L
Sbjct: 196 KDGSAARAARRTAAYEEFFLFQL-RLQSIRRA---NRQKDGNQILYNNQEL--------- 242
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
+ ++ +P+ LT +Q ++EI DL+QP MNRLLQGDVG GKT+VA +A V+
Sbjct: 243 ---RDFIKTIPFELTGAQKRVVNEICRDLRQPYQMNRLLQGDVGSGKTIVAAIAINAVVI 299
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+GYQAA M PTE+LA QH + L K+ + I LLTGS +Q R + K ++ G
Sbjct: 300 AGYQAALMAPTEILAAQHAQKLAKVFVGTHVN-----IGLLTGSMNTRQKRQMLKGIKDG 354
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
I L+IGTH+LI E+V+++ L LAI+DEQ RFGV QR + K +
Sbjct: 355 SINLIIGTHALIQEQVDYANLGLAIIDEQHRFGVNQRQQLRMKGVH-------------- 400
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
P VLAM+ATPIPRTLA+ YG+M ++ I +LP GR PIKT ++ N+
Sbjct: 401 ---------PDVLAMTATPIPRTLAITSYGEMDVSIIDELPAGRQPIKTTWLKSNQ 447
>gi|167769311|ref|ZP_02441364.1| hypothetical protein ANACOL_00636 [Anaerotruncus colihominis DSM
17241]
gi|167668279|gb|EDS12409.1| putative ATP-dependent DNA helicase RecG [Anaerotruncus colihominis
DSM 17241]
Length = 680
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 133/351 (37%), Positives = 177/351 (50%), Gaps = 46/351 (13%)
Query: 385 IYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEA 444
+YP GL + + +AL P + +P+ + GL + A IH+P
Sbjct: 145 VYPLTEGLTQKAFANLVEQALARAPRLPERIPETVRAGNGLEGIGQAVRDIHRPSDAAAL 204
Query: 445 DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKL 504
+ A++RLIF+E F L G GLL + R AA M+ S K
Sbjct: 205 ERAKRRLIFEELFMLAAG---------------VGLL-RTRARTEQAAPMQPHS--LKAF 246
Query: 505 LRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAA 564
ALP+ LT +Q AI+++ DL++P P NRL+QGDVG GKT+VA SG Q+A
Sbjct: 247 YTALPFELTGAQRRAIADLTDDLQKPTPANRLVQGDVGSGKTMVAAAGAYFAFLSGAQSA 306
Query: 565 FMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVI 624
M PTELLA QHYE L L + + K ALL GS Q R + L+TG+I L
Sbjct: 307 MMAPTELLARQHYEGLKPLCEKL-----GMKTALLIGSLTPAQKRAVYNALETGEIDLCF 361
Query: 625 GTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQ 684
GTH+LI++ V F L L I DEQ RFGV QR + K
Sbjct: 362 GTHALISQGVHFMNLGLVITDEQHRFGVAQRAKLRRK----------------------- 398
Query: 685 HMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
H L MSATPIPRTLAL +YG++ ++ I +LPPGR P+ TY I ++
Sbjct: 399 GRCAHTLVMSATPIPRTLALMIYGELDISVIDELPPGRSPVLTYKISSGKR 449
>gi|444914779|ref|ZP_21234919.1| ATP-dependent DNA helicase RecG [Cystobacter fuscus DSM 2262]
gi|444714288|gb|ELW55173.1| ATP-dependent DNA helicase RecG [Cystobacter fuscus DSM 2262]
Length = 938
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 149/437 (34%), Positives = 226/437 (51%), Gaps = 76/437 (17%)
Query: 322 TRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAK-- 379
T F + P+L+ + VG+ + +SG+VRA S RE + ++ +DL + +
Sbjct: 334 TYFNAGPWLQQ---RFPVGKRLVLSGEVRASLSG-----REISHPEIEPAEDLEVSSVHF 385
Query: 380 GRPYPIYPS--KGGLN-----ASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAY 432
R P+YP +G AS++ ++ A L+ +P+P + ++ L+ L +A
Sbjct: 386 NRIVPVYPGFERGDQRSFRELASVVSESYASHLE------EPLPNPLREKLELMTLPEAL 439
Query: 433 MGIHQPKHIDEADL-------ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYR 485
IH P + ++ A +RL FDE F+LQLG L+ G + EK + D
Sbjct: 440 RAIHFPAGSADPEMLDKHLSPAHRRLAFDELFFLQLG---MGLKRQGKKTEKGIVFD--- 493
Query: 486 KPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGK 545
++A+ +E + ALP+ LT +Q I EI D+ PMNRL+QGDVG GK
Sbjct: 494 ---VSASRLEQARA-------ALPFELTGAQKRVIEEIARDMGHDEPMNRLVQGDVGSGK 543
Query: 546 TVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPV 605
T VA ++ + + GYQ A M PTE+LA QH KLL+ + K+ L++ S
Sbjct: 544 TAVAVVSALVALRDGYQVAVMAPTEILAEQHERTFHKLLEPLGF-----KVGLVSASGTA 598
Query: 606 KQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYT 665
K+ R +R+ + G+I L +GTH+LI E + F L ++DEQ RFGV+QR SK +
Sbjct: 599 KKKREVREAVARGEIHLAVGTHALIQEGIAFDKLGFVVIDEQHRFGVLQRHMLMSKGVF- 657
Query: 666 SMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPI 725
P VL M+ATPIPRTLA+ LYGD+ ++ I +LPPGR P+
Sbjct: 658 ----------------------PDVLVMTATPIPRTLAMTLYGDLDVSVIDELPPGRTPV 695
Query: 726 KTYIIEGNEKGYENVYK 742
KT + N+K VY+
Sbjct: 696 KTRVF--NDKQRARVYE 710
>gi|395764278|ref|ZP_10444947.1| ATP-dependent DNA helicase RecG [Janthinobacterium lividum PAMC
25724]
Length = 700
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 138/361 (38%), Positives = 190/361 (52%), Gaps = 53/361 (14%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQP-KHID 442
P+YPS GL+ ++LR IA A+ + + D +P ++ ++ L A +H P + ID
Sbjct: 156 PVYPSGEGLSQNVLRREIAAAMHRIDWH-DTLPDDLLRQMQLSPFQAAVRLLHYPPQDID 214
Query: 443 EADL------ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLN--AAYM 494
E+ L A R+ FDE QL L + ++ R + AA +
Sbjct: 215 ESALMDRSHPAWVRMKFDELLAQQLS------------------LKRAQRTRRSKGAAQL 256
Query: 495 EGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACM 554
+L+ ALP+ LT +Q + EI DL QP PM RLLQGDVG GKTVVA L+
Sbjct: 257 PIVGTLSHAFGAALPFKLTGAQARVLEEIRADLHQPYPMQRLLQGDVGSGKTVVAALSAT 316
Query: 555 EVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKD 614
+ I SGYQAA M PTE+LA QH+ + ++ + K+A LTGS K+
Sbjct: 317 QAIDSGYQAALMAPTEILAEQHFRKIAAWMEPL-----GVKVAWLTGSLKKKEKTAALAL 371
Query: 615 LQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMV 674
+++G+ LVIGTH+LI + V F+ L L IVDEQ RFGV QR + +
Sbjct: 372 IESGEAQLVIGTHALIQDNVLFAKLGLVIVDEQHRFGVGQR---------------LTLR 416
Query: 675 NSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNE 734
N K D PH L MSATPIPRTLA+ Y D+ ++ I +LPPGR PI T I+ N
Sbjct: 417 N-----KGDSAAVPHQLMMSATPIPRTLAMTYYADLEVSVIDELPPGRSPIVTRSIDQNR 471
Query: 735 K 735
+
Sbjct: 472 R 472
>gi|258652096|ref|YP_003201252.1| ATP-dependent DNA helicase RecG [Nakamurella multipartita DSM
44233]
gi|258555321|gb|ACV78263.1| ATP-dependent DNA helicase RecG [Nakamurella multipartita DSM
44233]
Length = 760
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 129/358 (36%), Positives = 189/358 (52%), Gaps = 41/358 (11%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE 443
P+YP G+ ++L+ ++ L P DPVP+ + + GL+ L A IH+P+ +
Sbjct: 175 PVYPLVEGVTQAVLQRSVRLLLDLGPRIEDPVPEVLLAQRGLVDLATALHDIHRPRTQEH 234
Query: 444 ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKK 503
D A+ RL +DE +QL + + L +F E PR+ ++ + +
Sbjct: 235 LDRAKARLRYDEALSVQL--VLARRKALAREFPAEPC------PRVPGGLLDAFDA---- 282
Query: 504 LLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQA 563
LP+ LT+ Q + I DL PMNRLLQG+VG GKTVVA A ++VI SG QA
Sbjct: 283 ---NLPFELTAGQRAVGEAIGTDLATIHPMNRLLQGEVGSGKTVVALRAMLQVIDSGRQA 339
Query: 564 AFMVPTELLATQHYEHLLKLL------DNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQT 617
+ PTE+LA QH L ++L + I LLTGS P K ++ + +
Sbjct: 340 VMLAPTEVLAAQHARSLRQVLGPLGRGGELGAPAESTAITLLTGSLPAKARKLALLTIAS 399
Query: 618 GDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSD 677
G +V+GTH+L++E V F+ L L +VDEQ RFGV QR +K + D
Sbjct: 400 GQAGIVVGTHALLSEGVFFANLGLIVVDEQHRFGVEQRHALRTK-------------HPD 446
Query: 678 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
GSP PHVL M+ATPIPRT+A+ ++GD+ + + +LP GR PI T ++ EK
Sbjct: 447 GSP-------PHVLVMTATPIPRTVAMTVFGDLDTSTLDELPRGRSPIGTTVVPAAEK 497
>gi|189425013|ref|YP_001952190.1| ATP-dependent DNA helicase RecG [Geobacter lovleyi SZ]
gi|189421272|gb|ACD95670.1| ATP-dependent DNA helicase RecG [Geobacter lovleyi SZ]
Length = 765
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 161/552 (29%), Positives = 254/552 (46%), Gaps = 89/552 (16%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
L I + G+ +L L G ++ L P Y D + ++
Sbjct: 63 LTTGIQFIKGVGPKLAELLAKRGIRSVEDALFCLPHRYEDRR----------------QL 106
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSG----DEVVNIDSGQKKKIYLHLKKFFRGT 322
I R +K G + F ++ E TET G + VV +SG + H +
Sbjct: 107 IPIRQLKPGSNHVFQGTVISTE--STETRGGRKVFEAVVQDESGSIVLKWFHANGVWMKR 164
Query: 323 RFTSIPFLKSIEGKHKV--GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG 380
+ G+ V GE K + + + +++ + D ++ G
Sbjct: 165 TWQV--------GRQGVFTGELSSFGWKPEVHHPDVEWLEKGTDVNAVMTADPVNF---G 213
Query: 381 RPYPIYPSKGGLNASLLRDTIARALQALPANFDPV-PKEITQEFGLLCLFDAYMGIHQPK 439
R P+YP GL+ +R + + + N + + P+ + + + L L +A +H P
Sbjct: 214 RIVPVYPLTEGLHQKGMRRVMRQVVDTFLPNLENILPQSLLETYQYLPLREALGQVHLPP 273
Query: 440 H------IDEA-DLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAA 492
++E LA + L FDEFF+ +LG L+ G E EG+ R+
Sbjct: 274 SDAPLIDLNEGRTLAHRSLAFDEFFFWELG---LALKKRGVALE-EGI-----SFRVTHR 324
Query: 493 YMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLA 552
Y TK+L++ LP+ LT++Q +SEI D+ PM+RL+QGDVG GKT+VA +A
Sbjct: 325 Y-------TKELVKLLPFQLTAAQRRVLSEIKADMMASHPMHRLVQGDVGSGKTLVALMA 377
Query: 553 CMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIR 612
+ + + YQ A M PTE+LA QH+ ++ D + + + LLT K +
Sbjct: 378 ALVAVENDYQVAIMAPTEILAEQHWHNIHHWCDQLGVN-----VVLLTSGMRGKVKKEAL 432
Query: 613 KDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMA 672
+ + G ++VIGTH++I +KVEF L L IVDEQ RFGV+QRG K
Sbjct: 433 QQVADGRASIVIGTHAVIQDKVEFHRLGLGIVDEQHRFGVLQRGVLKKK----------- 481
Query: 673 MVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT--YII 730
P +L M+ATPIPRTLA+ L+GD++L+ I +LPPGR PI T Y
Sbjct: 482 ------------GANPDILVMTATPIPRTLAMTLFGDLALSVIDELPPGRTPINTKIYFE 529
Query: 731 EGNEKGYENVYK 742
++ YE +++
Sbjct: 530 SRRKQVYEMIHQ 541
>gi|406980369|gb|EKE01980.1| hypothetical protein ACD_21C00011G0005 [uncultured bacterium]
Length = 696
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 133/363 (36%), Positives = 191/363 (52%), Gaps = 52/363 (14%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPAN---FDPVPKEITQEFGLLCLFDAYMGIHQPK- 439
P+YP+ GL+ +LR+ +AL N + +P EI ++F L A +H+P
Sbjct: 150 PVYPTTDGLSQFVLRNLTTQALNISEKNQALAEYLPDEILEQFRFPDLRSALNFVHKPSP 209
Query: 440 HIDEADL------ARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAY 493
++D + AR+RLIF+E QL LL + ++++A
Sbjct: 210 NLDINAITSRDHPARRRLIFEELLAQQLS-----------------LLKLRAETQIHSAQ 252
Query: 494 MEGW-SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLA 552
W ++L K L L +SLT +Q + EII DL QP PM RLLQGDVGCGKTVVA LA
Sbjct: 253 PLLWDNALATKFLAGLAFSLTGAQQRVLQEIIKDLAQPKPMLRLLQGDVGCGKTVVAALA 312
Query: 553 CMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIR 612
+ + G+QAA M PTE+LA QH++++ L+ + K+ LLTG K +
Sbjct: 313 IAQTVHQGFQAAIMAPTEILAEQHFKNIAHWLEPL-----NIKVILLTGKIKGKTRQSTI 367
Query: 613 KDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMA 672
K++ G I +++GTH++ EKVEF L L I+DEQ RFGV QR + K + +G
Sbjct: 368 KNIADGSIQVIVGTHAIFQEKVEFKDLALTIIDEQHRFGVHQRLQLREK----GLKNG-- 421
Query: 673 MVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEG 732
PH L M+ATPIPRTLA+ +Y D+ + I +LP GR I T I+
Sbjct: 422 -------------RYPHQLIMTATPIPRTLAMTIYADLDCSIIDELPKGRASITTIIVSN 468
Query: 733 NEK 735
+
Sbjct: 469 KRR 471
>gi|422825746|ref|ZP_16873925.1| DNA helicase RecG [Streptococcus sanguinis SK678]
gi|422860747|ref|ZP_16907391.1| DNA helicase RecG [Streptococcus sanguinis SK330]
gi|422863212|ref|ZP_16909844.1| DNA helicase RecG [Streptococcus sanguinis SK408]
gi|324995182|gb|EGC27094.1| DNA helicase RecG [Streptococcus sanguinis SK678]
gi|327469130|gb|EGF14602.1| DNA helicase RecG [Streptococcus sanguinis SK330]
gi|327473512|gb|EGF18932.1| DNA helicase RecG [Streptococcus sanguinis SK408]
Length = 671
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 158/535 (29%), Positives = 256/535 (47%), Gaps = 95/535 (17%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + ++ +PG+ + + G TL+ LL +FP Y D ++ + DL+DG+ + G+
Sbjct: 3 LHQPLTVLPGVGPKSAEKFAKLGLETLQDLLLYFPFRYEDFKSKNVLDLEDGEKAVVSGQ 62
Query: 266 IISSRGMKA-GCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRF 324
+++ ++ G + L + G+ + ++ F
Sbjct: 63 VVTPANVQYYGYKRNRLRFTI---------KQGEVALAVN-------------------F 94
Query: 325 TSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPY 383
+ P+L K +VG + V GK +A S ++ + + EDDL
Sbjct: 95 FNQPYLAD---KIEVGANLAVFGKWDKAKASLTGMKL------LAQVEDDLQ-------- 137
Query: 384 PIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKHI 441
P+Y G++ + L I A Q L + +P+ + + + L+ +A +H PK +
Sbjct: 138 PVYRLAQGISQASLVKLIKTAFDQGLDLLLEENLPQSLLERYQLVSRVEAVRAMHFPKDL 197
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
+ A +R+ F+E FY Q+ Q + +L + K N ++
Sbjct: 198 TDYKQALRRVKFEELFYFQM------------QLQ---VLKRETKAVSNGLKIDWQLDAV 242
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
+ ++LP+ LTS+Q +++EI+ DL+ P MNRLLQGDVG GKTVVA LA V +G+
Sbjct: 243 AEKKKSLPFELTSAQERSLTEILQDLRSPGHMNRLLQGDVGSGKTVVAGLAMYAVYTAGF 302
Query: 562 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDIT 621
Q+A MVPTE+LA QH++ L +L + K+ALLTG + R ++ G +
Sbjct: 303 QSALMVPTEILAEQHFDSLAQLFPEL-------KLALLTGGMKAAERRETLAAIENGQVD 355
Query: 622 LVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPK 681
+++GTH+LI E V + AL L I+DEQ RFGV QR K D
Sbjct: 356 MIVGTHALIQEGVRYHALGLVIIDEQHRFGVEQRRILREK--------------GDN--- 398
Query: 682 DDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKG 736
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T ++ + G
Sbjct: 399 ------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIITRWVKHEQLG 447
>gi|333991317|ref|YP_004523931.1| ATP-dependent DNA helicase RecG [Mycobacterium sp. JDM601]
gi|333487285|gb|AEF36677.1| ATP-dependent DNA helicase RecG [Mycobacterium sp. JDM601]
Length = 742
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 161/540 (29%), Positives = 245/540 (45%), Gaps = 97/540 (17%)
Query: 229 GFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEIISSRGMKAGCSFSFLEVIVGCE 288
G T+ LL H+PR+Y + + D SR + G + ++ I
Sbjct: 25 GIRTVGDLLRHYPRSYVEGTGVRGAAD-------------SR-PEEGDHITVVDTIGSAV 70
Query: 289 IADTETTSGDEV-VNIDSGQKKKIYLHLKKFF--RGTRFTSIPFLKSIEGKHKVGEFVCV 345
+ D + G + V + SG+ K FF +G R+ P G V +
Sbjct: 71 LKDMQRRKGKYLAVTVGSGRNKVS----ATFFNPKGLRWRLTP-----------GTRVML 115
Query: 346 SGKVRAMR---------------SNNHYEMREYNIDVLKDEDDLSLRAKGRP-------- 382
SG+V+ R ++ + + L++ D S + G+
Sbjct: 116 SGEVKLYRGAIQLTHPDFLVLKEADGAAQQHNFGSSSLRNIADASQKVSGQISQADFERS 175
Query: 383 -YPIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
YPIYP+ L + + + + L L DP+P + E GLL +A IH +
Sbjct: 176 CYPIYPATAKLQSWDIFACVRQVLAVLDPVPDPLPAAVRTERGLLSEDEALRAIHLSEKA 235
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLT 501
E D AR RL DE F LQ + + ++ + GL R L
Sbjct: 236 VERDRARDRLAVDEAFGLQ----WALAMRRHSELSESGLPAPRRA-----------DGLV 280
Query: 502 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGY 561
+LLR LP+ LT+ Q + + +L + PMNRLLQG+VG GKT+VA LA ++++ +GY
Sbjct: 281 AELLRRLPFELTAGQRDVLDVLKAELGETRPMNRLLQGEVGSGKTIVALLAMLQLVDAGY 340
Query: 562 QAAFMVPTELLATQHYEHL------LKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDL 615
Q A + PTE+LA QH + L L + + + LLTGS + R ++
Sbjct: 341 QCALLAPTEVLAAQHVRSIRDMLGPLALGGQLGGSDNATAVTLLTGSMAAAAKKQARAEI 400
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
G +V+GTH+L+ + VEF+ L + +VDEQ RFGV QR R +K
Sbjct: 401 ADGRAGIVVGTHALLVDAVEFANLGMVVVDEQHRFGVEQRDRLRAK-------------A 447
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
DG + PH+L M+ATPIPRT+AL +YGD+ + + +LP GR PI + +I EK
Sbjct: 448 PDG-------ITPHLLVMTATPIPRTVALTVYGDLETSTLRELPRGRQPIVSSVIFEKEK 500
>gi|306829933|ref|ZP_07463120.1| DNA helicase RecG [Streptococcus mitis ATCC 6249]
gi|304427944|gb|EFM31037.1| DNA helicase RecG [Streptococcus mitis ATCC 6249]
Length = 671
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 160/532 (30%), Positives = 255/532 (47%), Gaps = 99/532 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQAGLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSL 500
+ E A +R+ F+E FY Q+ L+ L ++ +G + + WS
Sbjct: 197 LAEYKQALRRIKFEELFYFQM-----QLQTLKSENRVQG-----------SGLVLNWSQE 240
Query: 501 TKKLLRA-LPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
+++ LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA + +
Sbjct: 241 KVTVVKENLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTA 300
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
GYQAA MVPTE+LA QH+E L L ++ K+ALLTGS + R + + + G+
Sbjct: 301 GYQAALMVPTEILAEQHFESLQNLFPDL-------KLALLTGSLKASEKREVLETIAKGE 353
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
L+IGTH+LI + V+++ L L I+DEQ RFGV QR K D
Sbjct: 354 ADLIIGTHALIQDGVDYARLGLIIIDEQHRFGVGQRRILREK--------------GDN- 398
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ ++GDM ++ I +P GR PI T I+
Sbjct: 399 --------PDVLMMTATPIPRTLAITVFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|418977979|ref|ZP_13525785.1| ATP-dependent DNA helicase RecG [Streptococcus mitis SK575]
gi|383348795|gb|EID26749.1| ATP-dependent DNA helicase RecG [Streptococcus mitis SK575]
Length = 671
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 161/533 (30%), Positives = 255/533 (47%), Gaps = 101/533 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L + + +PG+ + + G L+ LL +FP Y D + Q+ +L+DG+ + G+
Sbjct: 3 LHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQ 62
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKK--FFRGTR 323
+++ ++ + F ++ ++ LK+
Sbjct: 63 VVTPASVQ---YYGF--------------------------KRNRLRFSLKQGEVVFAVN 93
Query: 324 FTSIPFLKSIEGKHKVGEFVCVSGKV-RAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+L K ++G + V GK RA S ++ + + EDDL
Sbjct: 94 FFNQPYLAD---KIELGATLAVFGKWDRAKASLTGMKV------LAQVEDDLQ------- 137
Query: 383 YPIYPSKGGLNASLLRDTIARAL-QALPANFDP-VPKEITQEFGLLCLFDAYMGIHQPKH 440
P+Y G++ + L I A Q L + +P+ + ++ L+ A +H PK
Sbjct: 138 -PVYRLAQGISQASLVKVIKTAFDQGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKD 196
Query: 441 IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQ--FEKEGLLDKYRKPRLNAAYMEGWS 498
+ E A +R+ F+E FY Q+ L+ L ++ + GL + + ++ A
Sbjct: 197 LAEYKQALRRIKFEELFYFQM-----QLQTLKSENRVQGSGLDLNWSQEKVTAVK----- 246
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
+LP++LT +Q ++ EI+ D+K MNRLLQGDVG GKTVVA LA +
Sbjct: 247 -------ESLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVT 299
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+GYQAA MVPTE+LA QH+E L L ++ K+ALLTGS V + R + + + G
Sbjct: 300 AGYQAALMVPTEILAEQHFESLQNLFPDL-------KLALLTGSLKVAEKREVLETIAKG 352
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+ L+IGTH+LI + V+++ L L I+DEQ RFGV QR K D
Sbjct: 353 EADLIIGTHALIQDGVDYARLSLIIIDEQHRFGVGQRRILREK--------------GDN 398
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIE 731
P VL M+ATPIPRTLA+ +GDM ++ I +P GR PI T I+
Sbjct: 399 ---------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIK 442
>gi|406915295|gb|EKD54390.1| hypothetical protein ACD_60C00087G0002 [uncultured bacterium]
Length = 692
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 163/537 (30%), Positives = 249/537 (46%), Gaps = 98/537 (18%)
Query: 216 GLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYFIFIGEIISSRGMK 273
G+ KR +L N G +++ LL H P Y D + D+ G++ + GEI S K
Sbjct: 13 GVGKRTAERLANIGICSIQDLLFHLPMRYQDRSHVHEICDVSPGEHVVVHGEIESVALPK 72
Query: 274 AGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSI 333
G + L + + + +L L+ F+ T
Sbjct: 73 GGRTRLLLSI-----------------------KDRTGHLRLRFFYVNT---------LQ 100
Query: 334 EGKHKVGEFVCVSGKVRAMRSNNHYEMREYNID----VLKDEDDLSLRAKGRPYPIYPSK 389
+ + G +C G+VR EY + + ++ L+ PIYP+
Sbjct: 101 RNQLQTGVRLCCYGEVRLGSQGLEMIHPEYQVMTPHFIAPMDEHLT--------PIYPAT 152
Query: 390 GGLNASLLRDTIARALQALP---ANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDE--- 443
L+ +LR +AL+ L A + VP+ + ++F L +A +H+P ID
Sbjct: 153 ERLSQLMLRKLTEQALRLLTLGGALHEIVPEILLKKFSFPSLKEALQFVHRPP-IDAPLP 211
Query: 444 -----ADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWS 498
+ +++KRL+F+E +L L L F+ + + ++ P
Sbjct: 212 SLAAGSHISQKRLVFEELLAHRLSLL-----NLKKNFQVQKAIS-FKSP----------D 255
Query: 499 SLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIG 558
L KK L ALP+ LT +Q EI DL + PM RL+QGDVG GKTVVA LA ++ +
Sbjct: 256 ELIKKFLIALPFKLTPAQEKVTREIQQDLSKSYPMLRLVQGDVGSGKTVVAVLAMLQAVE 315
Query: 559 SGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTG 618
+GYQAAFM PTELLA QH+ L K L + LL+G + R ++
Sbjct: 316 NGYQAAFMAPTELLAEQHFHLLEKWLTPF-----SVHVVLLSGRLKTEPRREALAAIKEQ 370
Query: 619 DITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDG 678
+VIGTH++ ++VEF+ L L ++DEQ RFGV QR AM+ G
Sbjct: 371 RAQMVIGTHAIFQKEVEFAKLALVVIDEQHRFGVQQR----------------AMLREKG 414
Query: 679 SPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
Q PH L M+ATPIPRTLA+++Y D+ + I +LPPGR+P+ T +I + +
Sbjct: 415 V---SQTHCPHQLIMTATPIPRTLAMSVYADLDCSVIDELPPGRMPVITRVIANHRR 468
>gi|167970005|ref|ZP_02552282.1| ATP-dependent DNA helicase recG [Mycobacterium tuberculosis H37Ra]
Length = 1293
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 160/564 (28%), Positives = 258/564 (45%), Gaps = 81/564 (14%)
Query: 195 GSLPSEASIEPLLDKCISCVPGLSKRLYHQL---------ENCGFYTLRKLLHHFPRTYA 245
G LP D+ V LS RL L E G T+ LL H+PR+Y
Sbjct: 538 GLLPHRTPRRRAADRGRVAVASLSDRLDRVLGATAADALDEQFGMRTVDDLLRHYPRSYV 597
Query: 246 DLQNAQIDLDD-----GQYFIFIGEIISSRG--MKAGCSFSFLEVIVGCEIADTETT--S 296
+ A++ + D G++ + I + MK + L + VG T +
Sbjct: 598 E-GAARVGIGDARPEAGEHITIVDVITDTYSFPMKKKPNRKCLRITVGGGRNKVTATFFN 656
Query: 297 GDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIP---FLKSIEGK-HKVGEFVCVSGKVRAM 352
D ++ + K + +++G + P L S +GK H ++ +A+
Sbjct: 657 ADYIMRDLTKHTKVMLSGEVGYYKGAMQLTHPAFLILDSPDGKNHGTRSLKSIADASKAI 716
Query: 353 RSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRDTIARALQALPANF 412
E E R +PIYP+ + + + + + L L
Sbjct: 717 SGELVVEEFER-----------------RFFPIYPASTKVQSWDIFKCVRQVLDVLDRVD 759
Query: 413 DPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLG 472
DP+P E+ + GL+ +A IH + + AR+RL FDE LQ + ++
Sbjct: 760 DPLPAELRAKHGLIPEDEALRAIHLAESQSLRERARERLTFDEAVGLQ----WALVARRH 815
Query: 473 TQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVP 532
+ + G ++ + L +LLR LP+ LT+ Q + + L P
Sbjct: 816 GELSESGPSAAWKS-----------NGLAAELLRRLPFELTAGQREVLDVLSDGLAANRP 864
Query: 533 MNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLL------DN 586
+NRLLQG+VG GKT+VA LA ++++ +GYQ A + PTE+LA QH + +L
Sbjct: 865 LNRLLQGEVGSGKTIVAVLAMLQMVDAGYQCALLAPTEVLAAQHLRSIRDVLGPLAMGGQ 924
Query: 587 MEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDE 646
+ ++ ++ALLTGS Q + +R ++ +G + +VIGTH+L+ E V+F L + +VDE
Sbjct: 925 LGGAENATRVALLTGSMTAGQKKQVRAEIASGQVGIVIGTHALLQEAVDFHNLGMVVVDE 984
Query: 647 QQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALAL 706
Q RFGV QR + +K +P + PH+L M+ATPIPRT+AL +
Sbjct: 985 QHRFGVEQRDQLRAK-----------------APAG---ITPHLLVMTATPIPRTVALTV 1024
Query: 707 YGDMSLTQITDLPPGRIPIKTYII 730
YGD+ + + +LP GR PI T +I
Sbjct: 1025 YGDLETSTLRELPLGRQPIATNVI 1048
>gi|444304779|ref|ZP_21140569.1| DEAD/DEAH box helicase [Arthrobacter sp. SJCon]
gi|443482972|gb|ELT45877.1| DEAD/DEAH box helicase [Arthrobacter sp. SJCon]
Length = 1081
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 161/535 (30%), Positives = 249/535 (46%), Gaps = 92/535 (17%)
Query: 226 ENCGFYTLRKLLHHFPRTYADLQNAQI----DLDDGQYFIFIGEIISS--RGMKAGCSFS 279
++ G T+ +LL++FPR Y L ++ D+ + I ++SS R M+A
Sbjct: 348 KHLGITTVEELLNYFPRRY--LTRGELTPISDIPLDEDVTLIARVLSSSTRTMRA----- 400
Query: 280 FLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS--IPFLKSIEGKH 337
+ T D V++ D GQ + L +RG + I F K
Sbjct: 401 ------------RKGTITDVVISDDDGQAG-LRLVGGTDYRGKAPGTLKISFFNGYRAKA 447
Query: 338 KV--GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSL------RAKGRPYPIYPSK 389
++ G SGKV + + + +Y++ DE+ S + P P+YP+
Sbjct: 448 ELLPGRRALFSGKVTSFKGSLGLTNPDYHV---LDEEPFSAGGQDAGKLAAMPIPVYPAT 504
Query: 390 GGLNASLLRDTIARALQA--LPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA 447
L + ++ +A L+ L + DPVP + + G L L AY IH P+ + A
Sbjct: 505 AKLPSWKIQKVVAALLETADLASLPDPVPAAVAEREGFLPLHQAYRLIHAPETAADWKQA 564
Query: 448 RKRLIFDEFFYLQ--LGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLL 505
R+RL + E LQ L R L +E + R + AA+
Sbjct: 565 RERLRYQEALVLQSALARRRAQLA------SEEATARRPRPDGVRAAFD----------- 607
Query: 506 RALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAF 565
R+LP++LT Q + + +L + PMNRLLQG+VG GKTVVA A ++V+ +G QAA
Sbjct: 608 RSLPFTLTDGQAAVGKTLAGELARDFPMNRLLQGEVGSGKTVVALRAMLQVVDAGGQAAL 667
Query: 566 MVPTELLATQHYEHLLKLLDNMEEDKHKP----------KIALLTGSTPVKQSRMIRKDL 615
+ PTE+LA QHY+ + + L + D ++ LLTGS P R D
Sbjct: 668 LAPTEVLAAQHYDSIRRTLGPLSRDGLLGGLGAGDDASVQVTLLTGSMPTAARRQAMLDA 727
Query: 616 QTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVN 675
+G +VIGTH+L+++ V F L L +VDEQ RFGV QR +K
Sbjct: 728 ASGTAGIVIGTHALLSDNVSFYDLGLIVVDEQHRFGVEQRDALRAK-------------- 773
Query: 676 SDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
PH+L M+ATPIPRT+A+ ++GD+ + + +LP GR PI T+++
Sbjct: 774 --------ARKPPHLLVMTATPIPRTVAMTVFGDLETSTLDELPKGRAPITTHLV 820
>gi|145593830|ref|YP_001158127.1| ATP-dependent DNA helicase RecG [Salinispora tropica CNB-440]
gi|145303167|gb|ABP53749.1| DEAD/DEAH box helicase domain protein [Salinispora tropica CNB-440]
Length = 733
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 158/522 (30%), Positives = 242/522 (46%), Gaps = 84/522 (16%)
Query: 230 FYTLRKLLHHFPRTYADLQNAQID---LDDGQYFIFIGEI--ISSRGMKAGCSFSFLEVI 284
+T LL+H PR Y D + D LD G+ + ++ + R M+ + LEV
Sbjct: 30 LHTAGDLLYHVPRRY-DERGEHTDIRSLDVGEQVTVLAQVQRTAVRPMRQ-RRGNLLEVT 87
Query: 285 VGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTSIPFLKSIEGKHKVGEFVC 344
VG SG + + +R E + G +
Sbjct: 88 VGD----------------GSGGALTLTFFGNQVWR-------------ERDLRPGRWGL 118
Query: 345 VSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRA-----KGRPYPIYPSKGGLNASLLRD 399
+GKV RS EY + DE +++ G P+YP+ + ++
Sbjct: 119 FAGKVTEFRSRRQLNGPEYVLLGAGDEGEVAASEEVEEFAGALIPVYPAAAAVPTWVIAR 178
Query: 400 TIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLARKRLIFDEFFYL 459
+ L + DPVP + L+ L A +H+P + AR+RL +DE F +
Sbjct: 179 CVRVVLDTVDPPADPVPATVRTTRNLVGLGAALREVHRPSSKEALYRARRRLKWDEAFAV 238
Query: 460 QLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSA 519
QL + + K D+ +PR ++G L LPY LT+ Q
Sbjct: 239 QLTLVRR----------KRQAADRPARPR---PVVDG--GLRDAFDARLPYQLTAGQREV 283
Query: 520 ISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEH 579
+EI DL PM+RLLQG+VG GKTVVA A ++V+ +G QAA + PTE+LA QHY
Sbjct: 284 GTEIATDLASAHPMHRLLQGEVGSGKTVVALRAMLQVVDAGGQAALLAPTEVLAAQHYRG 343
Query: 580 LLKLLDN------MEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEK 633
+L LL + ++ +H ++ L+TGS R ++++G +V+GTH+L+ E
Sbjct: 344 ILDLLGSLGRAGELDAAEHATRVELVTGSLGAVARRRALGEVRSGVAGIVLGTHALLYEG 403
Query: 634 VEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAM 693
V+F+ L L +VDEQ RFGV QR +K DQ PHVL M
Sbjct: 404 VDFADLGLVVVDEQHRFGVEQRDALRAKA--------------------DQ--PPHVLVM 441
Query: 694 SATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
+ATPIPRT+A+ +YGD+ ++ ++ LP GR PI ++++ EK
Sbjct: 442 TATPIPRTVAMTVYGDLEVSTLSQLPRGRSPIASHVVPAAEK 483
>gi|193222220|emb|CAL60528.2| ATP-dependent DNA helicase recG [Herminiimonas arsenicoxydans]
Length = 711
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 137/359 (38%), Positives = 190/359 (52%), Gaps = 42/359 (11%)
Query: 384 PIYPSKGGLNASLLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPK-HID 442
P+YP+ GL+ +LLR TI A+ + D + +++ L+ A +H P ID
Sbjct: 164 PVYPAGEGLSQTLLRKTIIDAMARIEWR-DTLSEQLRSSLDLMSFEPAVRLLHNPPPDID 222
Query: 443 EADLARK------RLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG 496
E+ LA + R+ FDE QL K + + K AA +
Sbjct: 223 ESVLADRSHAAWVRMKFDELLAQQLSM-------------KRAQIARREK---GAAVLPT 266
Query: 497 WSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEV 556
L+K L+ LP+SLT++Q + E+ DLKQ PM RLLQGDVG GKTVVA +A +
Sbjct: 267 IGKLSKAFLKQLPFSLTAAQQRVLEEVRADLKQSFPMQRLLQGDVGSGKTVVAAIAAAQA 326
Query: 557 IGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQ 616
I SG+QA M PTE+LA QH+ + ++ + + +A LTGS K+ + ++
Sbjct: 327 IDSGFQAVLMAPTEILADQHFRKIAGWMEPLGVN-----VAWLTGSLKKKEKLEAKARIE 381
Query: 617 TGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNS 676
+G L+IGTH+LI E V+FS L L IVDEQ RFGV QR +K
Sbjct: 382 SGVAQLIIGTHALIQEDVQFSKLGLVIVDEQHRFGVGQRLVLRNK-------------GL 428
Query: 677 DGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK 735
D S Q PH L MSATPIPRTLA+ Y D+ ++ I +LPPGR PI T +I+ N +
Sbjct: 429 DASAAAAQQKIPHQLMMSATPIPRTLAMTYYADLEVSVIDELPPGRTPIVTRVIDQNRR 487
>gi|83815366|ref|YP_444415.1| ATP-dependent DNA helicase RecG [Salinibacter ruber DSM 13855]
gi|83756760|gb|ABC44873.1| ATP-dependent DNA helicase RecG [Salinibacter ruber DSM 13855]
Length = 700
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 169/543 (31%), Positives = 246/543 (45%), Gaps = 87/543 (16%)
Query: 204 EPLLDKCISCVPGL-SKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQ--IDLDDGQYF 260
E L + + V G+ KR E G T+ LL +PR Y D L +G
Sbjct: 3 EDFLQQDVRYVKGVGEKRADVWAEQHGVRTVHDLLRFYPRRYLDRTTVTPVRQLQEGPDS 62
Query: 261 IFIGEIISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFR 320
+ + + S + G + LE+I+ E G + K
Sbjct: 63 VTVVGTVRSVNVVPGNNQKRLEIILEGE----------------QGGRMK---------- 96
Query: 321 GTRFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKG 380
GT F + +++ G+ V G V + + M + D L DE L G
Sbjct: 97 GTWFQGVWWVRK---AFDEGDRVAFHGTVE--KYGRWHSMTHPDFDRLNDEG--PLLDTG 149
Query: 381 RPYPIYPSKGGL-NASLLRDTIARALQALPANF-----DPVPKEITQEFGLLCLFDAYMG 434
R P+YP + N L T+ R L L + +P I + L+ A
Sbjct: 150 RIVPLYPGGEAMSNVGLTSRTVRRVLYDLFKEHGLKLTETMPDWIMDGYDLMEGRVALRA 209
Query: 435 IHQPKHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYM 494
IH PK E AR+RL F+E F++QL L QM E ++ +
Sbjct: 210 IHFPKTQQELSRARRRLKFEELFFIQL-LLAQMHE---------------QQEEVAGPAF 253
Query: 495 EGWSSLTKKLLR-ALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLAC 553
+ + T++ +R LP+ LT +Q A+ EII D++ MNRLLQGDVG GKTVVA A
Sbjct: 254 DDPGAYTREFVREVLPFELTGAQTRALREIIGDVQTGTQMNRLLQGDVGSGKTVVAVAAM 313
Query: 554 MEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRK 613
M SGYQ+AFM PTE+LA QH+ +L L + +P+ LL GS + +
Sbjct: 314 MHAYDSGYQSAFMAPTEILAEQHHANLQDYLQPL---GLEPR--LLIGSQTKAEREAALQ 368
Query: 614 DLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAM 673
+++G + +GTH+LI ++V F L LA+VDEQ RFGV QR K
Sbjct: 369 AVRSGASPVAVGTHALIQDEVAFDRLGLAVVDEQHRFGVAQRAEMFEK------------ 416
Query: 674 VNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGN 733
PH+L M+ATPIPR+LAL LYGD+ +++I ++PPGR P++T +
Sbjct: 417 -----------GERPHMLLMTATPIPRSLALTLYGDLDVSKIDEMPPGRKPVETRLRAEK 465
Query: 734 EKG 736
+G
Sbjct: 466 RRG 468
>gi|261750290|ref|ZP_05993999.1| ATP-dependent DNA helicase RecG [Brucella suis bv. 5 str. 513]
gi|261740043|gb|EEY27969.1| ATP-dependent DNA helicase RecG [Brucella suis bv. 5 str. 513]
Length = 706
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 144/396 (36%), Positives = 196/396 (49%), Gaps = 57/396 (14%)
Query: 340 GEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIYPSKGGLNASLLRD 399
GE V VSGKV +Y I + D L L P+YP L+ L
Sbjct: 126 GETVIVSGKVEWFNGRASMVHPDY-IASMDDAASLPLVE-----PVYPLTADLSPKTLGR 179
Query: 400 TIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQPKHIDEADLA-----RKRLIFD 454
I AL +P + + + G A +HQP+ D D+A R+RL +D
Sbjct: 180 AIKEALTRVPVLPEWIDAPLLAREGFPAFQQALNTLHQPE--DPGDIALESITRRRLAYD 237
Query: 455 EFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTS 514
EF QL L + + RL+ +EG ++ +++R LPY LT
Sbjct: 238 EFLAGQLALA----------------LVRAKTRRLSGRPLEGTGNIVAEIMRHLPYRLTK 281
Query: 515 SQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLAT 574
+Q A+ EII DLK P M RLLQGDVG GKTVV L+ SG Q+A M PTE+LA
Sbjct: 282 AQEQAVREIITDLKSPQRMLRLLQGDVGSGKTVVGLLSMAHAAESGGQSALMAPTEVLAR 341
Query: 575 QHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKV 634
QH+ + L +K K ALLTG ++ + + L++G+I +VIGTH+L EKV
Sbjct: 342 QHFATIAPL-----AEKAGLKAALLTGREKGRERNAVLEGLKSGEIDIVIGTHALFQEKV 396
Query: 635 EFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMS 694
E+ L I+DEQ RFGV QR M+ + GS AP +L M+
Sbjct: 397 EYHDLVFVIIDEQHRFGVHQR----------------LMLTAKGS-------APDMLVMT 433
Query: 695 ATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
ATPIPRTL L +GDM ++++T+ P GR PI T I+
Sbjct: 434 ATPIPRTLVLTAFGDMDVSKLTEKPVGRQPITTAIV 469
>gi|426404255|ref|YP_007023226.1| ATP-dependent DNA helicase RecG [Bdellovibrio bacteriovorus str.
Tiberius]
gi|425860923|gb|AFY01959.1| ATP-dependent DNA helicase RecG [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 695
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 164/531 (30%), Positives = 255/531 (48%), Gaps = 89/531 (16%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQIDLDDGQYFIFIGEI 266
LD I + G+ +L G TL L +PR Y D + A+ I
Sbjct: 5 LDTQIQFLKGVGPKLGDLFSRKGLKTLGDLFEFYPRAYEDQRAAR-------------NI 51
Query: 267 ISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKKIYLHLKKFFRGTRFTS 326
S R + + + + + D +V SGQ +H K +FR
Sbjct: 52 SSLRPDDIVSIKATVVAVHSVNMGRSARKMYDVLVRDASGQ-----IHCK-YFR------ 99
Query: 327 IPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRPYPIY 386
+P+ E + K V V GKV R + + DV DE+ + P+Y
Sbjct: 100 VPYKGYFE-RFKPFTEVRVVGKVTEYRGRLEFHHPDIK-DVEPDEE-----TQDALIPLY 152
Query: 387 PSKGGLNAS----LLRDTIARALQALPANFDPVPKEITQEFGLLCLFDAYMGIHQP---- 438
GL + L+R A+ ++ P + PK + +++ L+ DA IH P
Sbjct: 153 TEIEGLATAKIMKLVRSAFAQ-IEEWPE--EAFPKWMREKYNLIPRKDALKDIHFPDPNK 209
Query: 439 --KHIDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKPRLNAAYMEG 496
++ + A+KR+IFDEFF+L+L L F+KEG A +
Sbjct: 210 AKEYSEFKTNAQKRIIFDEFFWLEL-----YLASKKAGFQKEG-----------APQIRN 253
Query: 497 WSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEV 556
+ LL++LP+ +T +Q +EI DL++ PM+R++QGDVG GKT+V+F+A +
Sbjct: 254 SGEKMRALLQSLPFEMTGAQKRVFTEIKADLEKGHPMHRMVQGDVGSGKTLVSFMAAIYA 313
Query: 557 IGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQ 616
SGYQ+ M PTE+LA QH+++ K+L+ + ++ LL G + + + + L
Sbjct: 314 AESGYQSCLMAPTEILAEQHFKNARKVLEPL-----GIRLGLLVGKSKASERKTLLAALA 368
Query: 617 TGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNS 676
G+I L+IGTH+LI ++V+FS L L I+DEQ RFGV QRG +K
Sbjct: 369 AGEIDLIIGTHALIEDEVQFSNLGLVIIDEQHRFGVEQRGVLKNK--------------- 413
Query: 677 DGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
G+ +PH L M+ATPIPRTLA+ +YGD+ ++ I ++P GR PI+T
Sbjct: 414 -GN-------SPHFLVMTATPIPRTLAMTVYGDLDVSIIDEMPAGRSPIQT 456
>gi|227510455|ref|ZP_03940504.1| DNA helicase RecG [Lactobacillus brevis subsp. gravesensis ATCC
27305]
gi|227190107|gb|EEI70174.1| DNA helicase RecG [Lactobacillus brevis subsp. gravesensis ATCC
27305]
Length = 691
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 162/531 (30%), Positives = 239/531 (45%), Gaps = 97/531 (18%)
Query: 207 LDKCISCVPGLSKRLYHQLENCGFYTLRKLLHHFPRTYADLQNAQI-DLDDGQYFIFIGE 265
L+ ++ + G+ + L G T+ LL +FPR Y DL + + DGQ G
Sbjct: 19 LNDSVAVLKGVGTKRLVALNKLGINTINDLLTYFPRRYDDLSIKDLSNAIDGQKVTVKGM 78
Query: 266 IISSRGMKAGCSFSFLEVIVGCEIADTETTSGDEVVNIDSGQKKK---IYLHLKKFFRGT 322
+I A + ++ G+KK L +
Sbjct: 79 VI------APPTLTYF------------------------GRKKSRLVFRLKINDNIYTV 108
Query: 323 RFTSIPFLKSIEGKHKVGEFVCVSGKVRAMRSNNHYEMREYNIDVLKDEDDLSLRAKGRP 382
F + P+LK + + + V G RS N + + +L D+ S +
Sbjct: 109 SFFNQPWLKK---EVNPNDEIIVFGTYN--RSRNQIQ----GMKILTDQSSNSFDS---- 155
Query: 383 YPIYPSKGGLNASLLRDTIARALQALPANF-DPVPKEITQEFGLLCLFDAYMGIHQPKHI 441
IYP+ + + ++ I A + +P ++ ++ L D IH P+
Sbjct: 156 --IYPANKEVKQATIKSLIKMAYDMYHTQLTNVIPDQLRAKYRLESFPDTIRNIHFPESP 213
Query: 442 DEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRK--PRLNAAYMEGWSS 499
A A + F EFF L L Q KE +RK P Y + S
Sbjct: 214 QAAQRAFRTAKFMEFF----------LFALKVQILKES----HRKTDPHAQIHYQQ---S 256
Query: 500 LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 559
L +K ++LP+ LT +Q + EI+ DL +P+ MNRLLQGDVG GKTVVA +A + I +
Sbjct: 257 LLEKFQKSLPFDLTPAQQKVVREILADLNRPIQMNRLLQGDVGSGKTVVAAMAILATISA 316
Query: 560 GYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGD 619
QAA M PTE+LA QH + K+ D ++ + IALLTG T R + +Q+G+
Sbjct: 317 HKQAAIMAPTEILAEQHANNFAKMFDGLDVN-----IALLTGDTSAAARRAMLPSIQSGE 371
Query: 620 ITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGS 679
+ L++GTH+L V++ L LA++DEQ RFGV QR K T+M
Sbjct: 372 VDLIVGTHALFQNDVQYDNLGLAVIDEQHRFGVNQRQALRQKGTSTNM------------ 419
Query: 680 PKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII 730
LAM+ATPIPRTLA+ +YGDM ++ I LP GR PIKT I
Sbjct: 420 -----------LAMTATPIPRTLAITMYGDMDVSIINQLPSGRKPIKTTWI 459
>gi|160896460|ref|YP_001562042.1| ATP-dependent DNA helicase RecG [Delftia acidovorans SPH-1]
gi|160362044|gb|ABX33657.1| ATP-dependent DNA helicase RecG [Delftia acidovorans SPH-1]
Length = 746
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 129/368 (35%), Positives = 192/368 (52%), Gaps = 47/368 (12%)
Query: 384 PIYPSKGGLNASLLRDTIARAL------QALPANFDPVPKEITQEFGLLCLF---DAYMG 434
P+YP+ GL + +R A+ LP P + GL LF DA
Sbjct: 182 PVYPTVAGLPQAYIRRAAVTAMLRADLSDTLPQGEHPPVAQFHGNGGLPPLFSLRDALQF 241
Query: 435 IHQPKH-------IDEADLARKRLIFDEFFYLQLGRLYQMLEGLGTQFEKEGLLDKYRKP 487
+H P D + A +RL +E QL +Q+E + + R P
Sbjct: 242 LHHPTPDVALATLEDHSHPAWQRLKAEELLAQQL-----------SQYEAKRERARLRAP 290
Query: 488 RLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTV 547
L A M+ L ++ L LP+ LT +Q ++EI+ D+++ +PM+RLLQGDVG GKTV
Sbjct: 291 VLRAQPMDSAQGLARQFLDQLPFGLTGAQQRVVAEILADMERRMPMHRLLQGDVGSGKTV 350
Query: 548 VAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQ 607
VA L+ + I +G+Q A M PTE+LA QH+ L+ L+ + K ++A L G+ K+
Sbjct: 351 VAALSAVACIEAGWQCALMAPTEILAEQHFGKLVGWLEPLLAPLGK-RVAWLAGAQKKKE 409
Query: 608 SRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSM 667
+ + + +G+ LV+GTH++I ++V+F L LA++DEQ RFGV QR KL + M
Sbjct: 410 RTAMLELVHSGEAALVVGTHAVIQDQVQFKNLALAVIDEQHRFGVAQRLALRQKLAASGM 469
Query: 668 SSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKT 727
PH+L MSATPIPRTLA++ Y D+ ++ I +LPPGR PI T
Sbjct: 470 E-------------------PHLLMMSATPIPRTLAMSYYADLDVSTIDELPPGRTPIVT 510
Query: 728 YIIEGNEK 735
+I + K
Sbjct: 511 KLIADSRK 518
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.137 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,444,046,653
Number of Sequences: 23463169
Number of extensions: 486015587
Number of successful extensions: 1127496
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9058
Number of HSP's successfully gapped in prelim test: 634
Number of HSP's that attempted gapping in prelim test: 1092442
Number of HSP's gapped (non-prelim): 13697
length of query: 742
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 592
effective length of database: 8,839,720,017
effective search space: 5233114250064
effective search space used: 5233114250064
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 81 (35.8 bits)