Query 045267
Match_columns 482
No_of_seqs 128 out of 1227
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 20:22:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045267.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045267hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vch_A Hydroquinone glucosyltr 100.0 1.7E-64 5.9E-69 520.3 43.4 462 5-472 1-469 (480)
2 3hbf_A Flavonoid 3-O-glucosylt 100.0 4.9E-65 1.7E-69 516.3 38.4 435 5-471 8-453 (454)
3 2acv_A Triterpene UDP-glucosyl 100.0 7.1E-59 2.4E-63 476.7 39.5 434 8-471 7-462 (463)
4 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 6.4E-59 2.2E-63 480.1 38.6 443 1-473 1-480 (482)
5 2c1x_A UDP-glucose flavonoid 3 100.0 1.2E-57 4.1E-62 466.3 37.1 433 9-472 6-452 (456)
6 2iya_A OLEI, oleandomycin glyc 100.0 1.5E-43 5E-48 360.4 31.4 401 4-471 6-421 (424)
7 4amg_A Snogd; transferase, pol 100.0 2.1E-44 7.1E-49 363.6 21.8 359 9-467 21-396 (400)
8 1iir_A Glycosyltransferase GTF 100.0 1.2E-41 4.2E-46 345.3 26.7 372 11-471 1-400 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 7.9E-41 2.7E-45 339.4 25.7 373 11-472 1-401 (416)
10 3h4t_A Glycosyltransferase GTF 100.0 2.4E-40 8.3E-45 334.4 24.1 368 11-474 1-385 (404)
11 3rsc_A CALG2; TDP, enediyne, s 100.0 4.3E-39 1.5E-43 326.4 32.1 381 9-471 19-413 (415)
12 3ia7_A CALG4; glycosysltransfe 100.0 2.7E-38 9.3E-43 318.8 33.4 383 8-472 2-399 (402)
13 2yjn_A ERYCIII, glycosyltransf 100.0 4.6E-38 1.6E-42 321.5 32.6 381 6-472 16-436 (441)
14 2p6p_A Glycosyl transferase; X 100.0 4.9E-37 1.7E-41 308.1 31.9 361 11-475 1-383 (384)
15 2iyf_A OLED, oleandomycin glyc 100.0 1.3E-36 4.5E-41 309.6 31.1 382 8-472 5-400 (430)
16 4fzr_A SSFS6; structural genom 100.0 2.4E-35 8.3E-40 297.2 27.3 359 7-466 12-395 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 2.8E-34 9.7E-39 289.4 27.0 350 9-469 19-395 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 1.6E-33 5.5E-38 283.1 27.7 359 10-470 1-387 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 3.9E-31 1.3E-35 267.4 29.9 365 9-471 19-408 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 6.2E-28 2.1E-32 239.9 29.9 343 11-474 3-359 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 1.1E-26 3.7E-31 205.4 14.4 162 255-450 5-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 7.5E-19 2.6E-23 174.1 25.4 339 11-473 7-357 (364)
23 2jzc_A UDP-N-acetylglucosamine 99.6 2.7E-15 9.4E-20 136.2 9.2 136 269-429 26-196 (224)
24 3hbm_A UDP-sugar hydrolase; PS 99.5 4E-13 1.4E-17 127.1 20.2 117 271-412 157-275 (282)
25 1v4v_A UDP-N-acetylglucosamine 99.3 9.8E-12 3.4E-16 123.3 13.5 108 342-470 255-365 (376)
26 3ot5_A UDP-N-acetylglucosamine 99.3 9.7E-12 3.3E-16 124.6 13.3 110 341-471 281-393 (403)
27 3okp_A GDP-mannose-dependent a 99.3 3.6E-10 1.2E-14 112.4 24.0 349 8-475 2-381 (394)
28 3c48_A Predicted glycosyltrans 99.3 2.6E-09 8.7E-14 108.0 30.5 360 3-448 13-408 (438)
29 3dzc_A UDP-N-acetylglucosamine 99.3 8.3E-11 2.8E-15 117.6 17.0 79 341-433 287-368 (396)
30 2r60_A Glycosyl transferase, g 99.2 1.4E-09 4.8E-14 112.1 23.3 81 341-433 334-425 (499)
31 3fro_A GLGA glycogen synthase; 99.2 1.3E-08 4.3E-13 102.6 29.2 117 342-479 311-436 (439)
32 2gek_A Phosphatidylinositol ma 99.2 4.3E-09 1.5E-13 105.0 24.3 116 341-475 262-385 (406)
33 1vgv_A UDP-N-acetylglucosamine 99.2 2.7E-10 9.2E-15 113.1 14.6 109 342-471 263-374 (384)
34 3beo_A UDP-N-acetylglucosamine 99.1 4E-09 1.4E-13 104.1 17.1 108 342-470 263-373 (375)
35 2jjm_A Glycosyl transferase, g 99.1 2E-07 6.9E-12 92.6 29.6 115 342-475 267-387 (394)
36 2iuy_A Avigt4, glycosyltransfe 99.0 5.2E-09 1.8E-13 102.1 17.2 122 274-431 164-307 (342)
37 2iw1_A Lipopolysaccharide core 99.0 3.4E-07 1.2E-11 90.0 30.3 141 272-445 196-351 (374)
38 4hwg_A UDP-N-acetylglucosamine 98.9 3E-08 1E-12 98.4 17.0 159 271-470 203-374 (385)
39 2x6q_A Trehalose-synthase TRET 98.9 8.5E-07 2.9E-11 88.7 27.5 112 341-473 292-414 (416)
40 3s28_A Sucrose synthase 1; gly 98.6 1.8E-06 6.3E-11 92.9 20.6 112 341-470 639-766 (816)
41 2qzs_A Glycogen synthase; glyc 98.4 6.2E-05 2.1E-09 76.7 24.3 112 342-474 347-477 (485)
42 2vsy_A XCC0866; transferase, g 98.4 0.00014 4.7E-09 75.8 27.1 123 342-479 434-565 (568)
43 1rzu_A Glycogen synthase 1; gl 98.3 6.6E-05 2.3E-09 76.5 23.2 114 341-475 345-477 (485)
44 2hy7_A Glucuronosyltransferase 98.3 0.00012 3.9E-09 73.1 24.0 74 342-433 265-353 (406)
45 2f9f_A First mannosyl transfer 98.3 5E-06 1.7E-10 72.7 11.7 131 273-433 24-163 (177)
46 3oy2_A Glycosyltransferase B73 98.2 0.00016 5.4E-09 71.9 22.4 112 344-474 256-391 (413)
47 2xci_A KDO-transferase, 3-deox 98.2 0.00033 1.1E-08 69.0 22.5 97 343-450 261-364 (374)
48 3qhp_A Type 1 capsular polysac 97.4 0.0015 5.2E-08 55.7 12.2 141 272-446 2-155 (166)
49 2bfw_A GLGA glycogen synthase; 97.3 0.003 1E-07 55.6 13.0 78 343-433 96-182 (200)
50 3q3e_A HMW1C-like glycosyltran 97.2 0.0026 8.8E-08 65.7 12.5 139 272-433 441-589 (631)
51 3rhz_A GTF3, nucleotide sugar 96.9 0.0023 7.8E-08 61.9 8.7 110 343-469 215-336 (339)
52 4gyw_A UDP-N-acetylglucosamine 96.9 0.025 8.6E-07 60.4 17.2 137 270-433 521-669 (723)
53 3tov_A Glycosyl transferase fa 96.7 0.068 2.3E-06 51.7 17.1 107 8-138 6-115 (349)
54 1psw_A ADP-heptose LPS heptosy 95.8 1 3.6E-05 42.9 20.2 104 11-138 1-106 (348)
55 3ty2_A 5'-nucleotidase SURE; s 93.9 0.17 6E-06 46.0 8.1 46 4-52 5-50 (261)
56 2x0d_A WSAF; GT4 family, trans 93.7 0.19 6.6E-06 49.7 8.9 79 342-433 295-380 (413)
57 2wqk_A 5'-nucleotidase SURE; S 90.2 1.4 4.6E-05 40.2 9.3 108 11-141 2-127 (251)
58 2phj_A 5'-nucleotidase SURE; S 89.8 1.9 6.6E-05 39.0 9.9 39 11-52 2-40 (251)
59 3vue_A GBSS-I, granule-bound s 89.8 6.8 0.00023 39.9 15.4 117 341-473 381-511 (536)
60 1uqt_A Alpha, alpha-trehalose- 85.1 2.5 8.4E-05 42.6 8.6 109 344-473 333-454 (482)
61 1l5x_A SurviVal protein E; str 79.8 9.8 0.00033 35.0 9.6 39 11-52 1-39 (280)
62 3t5t_A Putative glycosyltransf 79.3 9.4 0.00032 38.3 10.2 112 343-473 353-473 (496)
63 2v4n_A Multifunctional protein 78.4 9.4 0.00032 34.6 8.9 39 11-52 2-40 (254)
64 3qxc_A Dethiobiotin synthetase 78.0 5.7 0.0002 35.8 7.5 33 13-46 24-57 (242)
65 3vue_A GBSS-I, granule-bound s 78.0 1.7 5.8E-05 44.5 4.4 46 1-48 1-52 (536)
66 3lyu_A Putative hydrogenase; t 77.7 7.1 0.00024 31.8 7.4 35 11-49 19-53 (142)
67 2ywr_A Phosphoribosylglycinami 77.0 21 0.00071 31.4 10.7 34 11-48 2-37 (216)
68 3nb0_A Glycogen [starch] synth 76.4 12 0.00041 39.1 10.1 42 345-388 496-550 (725)
69 2x0d_A WSAF; GT4 family, trans 75.9 1.2 4.3E-05 43.7 2.6 40 9-49 45-89 (413)
70 3auf_A Glycinamide ribonucleot 75.3 27 0.00091 31.0 11.0 108 9-141 21-131 (229)
71 1j9j_A Stationary phase surviV 75.3 10 0.00034 34.2 8.2 39 11-52 1-39 (247)
72 1g5t_A COB(I)alamin adenosyltr 74.3 22 0.00076 30.7 9.9 102 11-123 29-131 (196)
73 1ccw_A Protein (glutamate muta 73.5 4.4 0.00015 32.9 5.0 40 8-48 1-40 (137)
74 3lrx_A Putative hydrogenase; a 72.1 9 0.00031 31.8 6.7 37 11-51 24-60 (158)
75 2b8t_A Thymidine kinase; deoxy 72.1 19 0.00065 31.8 9.2 48 1-49 1-50 (223)
76 4dzz_A Plasmid partitioning pr 68.8 20 0.00068 30.6 8.6 36 13-49 4-40 (206)
77 3fgn_A Dethiobiotin synthetase 68.4 24 0.00082 31.8 9.2 34 12-46 28-62 (251)
78 3vot_A L-amino acid ligase, BL 68.3 12 0.00042 36.5 7.8 33 104-136 67-101 (425)
79 3dfz_A SIRC, precorrin-2 dehyd 66.2 14 0.00048 32.7 6.9 145 271-451 32-185 (223)
80 1id1_A Putative potassium chan 66.1 3.2 0.00011 34.2 2.6 35 8-48 1-35 (153)
81 2e6c_A 5'-nucleotidase SURE; S 65.6 22 0.00077 31.8 8.2 39 11-52 1-39 (244)
82 3bgw_A DNAB-like replicative h 65.3 20 0.00068 35.4 8.7 40 12-52 199-238 (444)
83 3av3_A Phosphoribosylglycinami 63.8 65 0.0022 28.0 10.8 106 11-141 4-112 (212)
84 3ug7_A Arsenical pump-driving 63.4 47 0.0016 31.4 10.7 40 9-49 24-64 (349)
85 2gt1_A Lipopolysaccharide hept 61.9 22 0.00077 33.0 8.1 39 11-49 1-40 (326)
86 2gt1_A Lipopolysaccharide hept 61.0 12 0.00042 34.9 6.0 131 271-433 178-323 (326)
87 4ds3_A Phosphoribosylglycinami 60.9 26 0.00089 30.6 7.6 111 7-141 4-116 (209)
88 2qs7_A Uncharacterized protein 60.4 5.8 0.0002 32.5 3.1 36 12-48 10-45 (144)
89 3tqr_A Phosphoribosylglycinami 59.7 48 0.0017 29.0 9.2 109 10-142 5-114 (215)
90 1yt5_A Inorganic polyphosphate 59.6 6.4 0.00022 35.8 3.6 53 358-432 41-96 (258)
91 3pdi_A Nitrogenase MOFE cofact 57.8 13 0.00045 37.2 5.8 27 109-138 398-424 (483)
92 3llv_A Exopolyphosphatase-rela 57.4 5.3 0.00018 32.1 2.4 35 8-48 4-38 (141)
93 3zqu_A Probable aromatic acid 56.4 11 0.00038 33.0 4.4 37 10-48 4-40 (209)
94 3qjg_A Epidermin biosynthesis 55.8 13 0.00045 31.5 4.6 40 7-49 3-42 (175)
95 1fmt_A Methionyl-tRNA FMet for 55.6 60 0.002 30.3 9.6 101 9-142 2-112 (314)
96 3ih5_A Electron transfer flavo 53.8 28 0.00095 30.6 6.6 107 12-138 5-120 (217)
97 2iz6_A Molybdenum cofactor car 53.6 17 0.00057 30.9 5.0 44 346-389 93-140 (176)
98 2i2c_A Probable inorganic poly 53.3 9 0.00031 35.1 3.5 53 358-432 35-93 (272)
99 3da8_A Probable 5'-phosphoribo 52.8 28 0.00097 30.5 6.5 107 10-141 12-119 (215)
100 4a1f_A DNAB helicase, replicat 52.5 20 0.00067 34.0 5.8 38 12-50 48-85 (338)
101 3giu_A Pyrrolidone-carboxylate 51.6 20 0.00068 31.5 5.3 27 9-35 2-30 (215)
102 2vqe_B 30S ribosomal protein S 51.3 51 0.0018 29.7 8.0 32 111-142 157-190 (256)
103 3igf_A ALL4481 protein; two-do 51.1 54 0.0019 31.4 8.8 36 11-47 2-38 (374)
104 4grd_A N5-CAIR mutase, phospho 50.5 1.1E+02 0.0038 25.6 9.7 143 271-453 12-164 (173)
105 2yxb_A Coenzyme B12-dependent 49.3 16 0.00054 30.4 4.1 39 9-48 17-55 (161)
106 3lqk_A Dipicolinate synthase s 49.1 22 0.00074 30.9 5.0 40 8-49 5-45 (201)
107 1p3y_1 MRSD protein; flavoprot 48.5 12 0.0004 32.4 3.2 39 8-48 6-44 (194)
108 2q6t_A DNAB replication FORK h 48.1 32 0.0011 33.9 6.8 38 12-49 202-239 (444)
109 1jkx_A GART;, phosphoribosylgl 48.1 1.4E+02 0.0047 25.9 12.4 106 11-141 1-109 (212)
110 4b4o_A Epimerase family protei 47.4 14 0.00048 33.9 3.9 34 11-49 1-34 (298)
111 1y80_A Predicted cobalamin bin 47.1 24 0.00082 30.7 5.1 38 10-48 88-125 (210)
112 3dm5_A SRP54, signal recogniti 46.9 66 0.0023 31.6 8.7 41 11-52 101-141 (443)
113 3bbn_B Ribosomal protein S2; s 46.1 70 0.0024 28.3 7.9 30 112-141 157-188 (231)
114 2ixd_A LMBE-related protein; h 46.0 55 0.0019 29.2 7.5 22 99-120 84-105 (242)
115 1q1v_A DEK protein; winged-hel 45.8 66 0.0023 22.5 6.2 55 415-471 10-66 (70)
116 3mc3_A DSRE/DSRF-like family p 45.7 19 0.00064 28.9 3.9 35 13-48 19-55 (134)
117 3l7i_A Teichoic acid biosynthe 45.6 37 0.0013 35.8 7.3 113 346-471 603-719 (729)
118 2an1_A Putative kinase; struct 45.4 14 0.00049 34.0 3.6 56 355-432 60-119 (292)
119 1bg6_A N-(1-D-carboxylethyl)-L 45.4 13 0.00044 35.3 3.3 34 8-47 2-35 (359)
120 3mcu_A Dipicolinate synthase, 45.0 20 0.00068 31.3 4.1 39 9-49 4-43 (207)
121 3cio_A ETK, tyrosine-protein k 44.8 1.1E+02 0.0037 28.1 9.6 37 12-49 106-143 (299)
122 1u0t_A Inorganic polyphosphate 43.8 11 0.00038 35.1 2.6 56 355-432 72-131 (307)
123 1mvl_A PPC decarboxylase athal 43.5 27 0.00092 30.5 4.8 39 8-49 17-55 (209)
124 1meo_A Phosophoribosylglycinam 43.2 1.6E+02 0.0055 25.4 11.5 107 11-141 1-109 (209)
125 3qvl_A Putative hydantoin race 42.8 1.3E+02 0.0046 26.6 9.5 37 11-48 2-39 (245)
126 2hmt_A YUAA protein; RCK, KTN, 42.5 10 0.00035 30.2 1.8 35 8-48 4-38 (144)
127 3ghy_A Ketopantoate reductase 42.5 13 0.00043 35.2 2.7 34 8-47 1-34 (335)
128 2i2x_B MTAC, methyltransferase 42.4 34 0.0011 30.9 5.5 38 10-48 123-160 (258)
129 3rg8_A Phosphoribosylaminoimid 42.3 1.4E+02 0.0049 24.5 9.7 137 272-451 3-148 (159)
130 3afo_A NADH kinase POS5; alpha 42.0 17 0.00057 35.2 3.5 59 352-432 108-171 (388)
131 3ruf_A WBGU; rossmann fold, UD 41.5 1.4E+02 0.0046 27.7 10.0 37 8-49 23-59 (351)
132 2ew2_A 2-dehydropantoate 2-red 41.4 16 0.00053 33.8 3.2 32 10-47 3-34 (316)
133 3qsg_A NAD-binding phosphogluc 41.3 14 0.00049 34.4 2.9 38 4-47 18-56 (312)
134 2r8r_A Sensor protein; KDPD, P 41.3 31 0.0011 30.6 4.8 40 10-50 6-45 (228)
135 3hr8_A Protein RECA; alpha and 41.1 71 0.0024 30.3 7.8 40 12-52 63-102 (356)
136 2zts_A Putative uncharacterize 40.4 20 0.0007 31.5 3.7 39 12-50 32-70 (251)
137 3kkl_A Probable chaperone prot 40.1 43 0.0015 29.9 5.8 40 8-48 1-51 (244)
138 4hb9_A Similarities with proba 39.5 18 0.0006 34.7 3.3 30 10-45 1-30 (412)
139 3bh0_A DNAB-like replicative h 39.5 35 0.0012 31.7 5.3 37 12-49 70-106 (315)
140 2ejb_A Probable aromatic acid 38.7 41 0.0014 28.8 5.1 36 11-48 2-37 (189)
141 3tov_A Glycosyl transferase fa 38.6 90 0.0031 29.3 8.1 102 10-143 185-290 (349)
142 1ydh_A AT5G11950; structural g 38.3 1.7E+02 0.0058 25.5 9.2 45 344-388 89-143 (216)
143 3kcq_A Phosphoribosylglycinami 38.3 57 0.0019 28.5 6.1 104 10-142 8-113 (215)
144 2r85_A PURP protein PF1517; AT 37.8 27 0.00093 32.4 4.3 32 10-48 2-33 (334)
145 2lpm_A Two-component response 37.7 23 0.00078 27.9 3.1 33 108-140 49-86 (123)
146 4dll_A 2-hydroxy-3-oxopropiona 37.6 31 0.0011 32.2 4.6 34 8-47 29-62 (320)
147 2qv7_A Diacylglycerol kinase D 37.5 41 0.0014 31.6 5.5 29 358-388 80-114 (337)
148 2dpo_A L-gulonate 3-dehydrogen 37.4 17 0.00059 34.1 2.7 37 6-48 2-38 (319)
149 1kjn_A MTH0777; hypotethical p 37.3 24 0.00083 28.8 3.1 32 16-48 13-45 (157)
150 1psw_A ADP-heptose LPS heptosy 37.3 1.8E+02 0.0061 26.8 10.1 103 10-142 180-289 (348)
151 2r6a_A DNAB helicase, replicat 37.1 36 0.0012 33.6 5.2 38 12-49 205-242 (454)
152 1xp8_A RECA protein, recombina 36.9 79 0.0027 30.1 7.4 41 11-52 75-115 (366)
153 3s40_A Diacylglycerol kinase; 36.8 43 0.0015 31.0 5.4 29 358-388 63-97 (304)
154 1sbz_A Probable aromatic acid 35.8 36 0.0012 29.4 4.3 37 11-48 1-37 (197)
155 1lss_A TRK system potassium up 35.7 19 0.00065 28.4 2.4 32 10-47 4-35 (140)
156 4ezb_A Uncharacterized conserv 35.7 27 0.00094 32.6 3.9 37 4-47 19-56 (317)
157 3lp6_A Phosphoribosylaminoimid 35.4 2E+02 0.0067 24.1 8.9 138 272-451 8-155 (174)
158 3ezx_A MMCP 1, monomethylamine 35.2 47 0.0016 29.0 5.1 39 10-49 92-130 (215)
159 2bon_A Lipid kinase; DAG kinas 35.0 66 0.0022 30.1 6.5 30 357-388 81-118 (332)
160 3u7q_B Nitrogenase molybdenum- 35.0 2.7E+02 0.0092 27.9 11.3 33 10-48 364-396 (523)
161 1qzu_A Hypothetical protein MD 34.9 27 0.00091 30.4 3.3 40 8-49 17-57 (206)
162 3ahc_A Phosphoketolase, xylulo 34.9 2.9E+02 0.01 29.5 11.8 83 363-458 726-813 (845)
163 2pn1_A Carbamoylphosphate synt 34.5 48 0.0017 30.7 5.5 35 8-48 2-37 (331)
164 2dfa_A Hypothetical UPF0271 pr 34.5 42 0.0014 30.0 4.5 110 15-138 33-162 (250)
165 4huj_A Uncharacterized protein 34.3 18 0.00063 31.6 2.3 33 8-46 21-53 (220)
166 1v6t_A Hypothetical UPF0271 pr 33.8 43 0.0015 30.0 4.5 110 15-138 33-162 (255)
167 1eiw_A Hypothetical protein MT 33.7 54 0.0018 25.3 4.6 64 356-430 36-108 (111)
168 3pfn_A NAD kinase; structural 33.6 17 0.00059 34.8 2.0 58 353-432 103-164 (365)
169 2xdo_A TETX2 protein; tetracyc 33.3 25 0.00087 33.7 3.3 37 5-47 21-57 (398)
170 3li6_A Calcium-binding protein 33.1 81 0.0028 20.5 5.2 56 409-472 9-64 (66)
171 2g1u_A Hypothetical protein TM 32.7 36 0.0012 27.6 3.7 35 8-48 17-51 (155)
172 2w84_A Peroxisomal membrane pr 32.7 68 0.0023 22.4 4.4 57 417-480 13-69 (70)
173 1pno_A NAD(P) transhydrogenase 32.6 48 0.0016 27.6 4.2 39 10-49 23-64 (180)
174 1qgu_B Protein (nitrogenase mo 32.4 3.2E+02 0.011 27.3 11.3 34 10-49 360-393 (519)
175 3h75_A Periplasmic sugar-bindi 32.2 2.3E+02 0.008 26.0 10.0 38 104-141 53-94 (350)
176 3o1l_A Formyltetrahydrofolate 32.1 3E+02 0.01 25.3 10.4 106 9-141 104-211 (302)
177 1o97_C Electron transferring f 31.7 40 0.0014 30.6 4.1 32 110-141 110-147 (264)
178 2lnd_A De novo designed protei 31.7 1E+02 0.0035 21.9 5.2 49 378-431 49-100 (112)
179 1ehi_A LMDDL2, D-alanine:D-lac 31.7 40 0.0014 32.3 4.4 40 8-48 1-45 (377)
180 3kjh_A CO dehydrogenase/acetyl 31.6 29 0.00098 30.5 3.2 38 11-49 1-38 (254)
181 1qkk_A DCTD, C4-dicarboxylate 31.5 1.2E+02 0.0042 23.8 6.9 48 379-432 74-121 (155)
182 1q57_A DNA primase/helicase; d 31.4 2E+02 0.0068 28.5 9.7 39 12-50 244-282 (503)
183 3l4e_A Uncharacterized peptida 31.4 88 0.003 27.0 6.2 44 262-305 19-62 (206)
184 3gpi_A NAD-dependent epimerase 31.2 46 0.0016 30.0 4.6 35 8-48 1-35 (286)
185 3icc_A Putative 3-oxoacyl-(acy 31.1 2.2E+02 0.0074 24.8 9.1 33 12-48 8-40 (255)
186 1xw8_A UPF0271 protein YBGL; N 31.1 49 0.0017 29.6 4.3 110 15-138 28-157 (252)
187 1jx7_A Hypothetical protein YC 30.9 46 0.0016 25.3 3.9 27 22-48 16-43 (117)
188 1rw7_A YDR533CP; alpha-beta sa 30.9 87 0.003 27.7 6.3 39 10-49 3-52 (243)
189 2bru_C NAD(P) transhydrogenase 30.9 52 0.0018 27.5 4.2 39 10-49 30-71 (186)
190 2xj4_A MIPZ; replication, cell 30.7 47 0.0016 30.2 4.6 39 10-49 3-43 (286)
191 1u94_A RECA protein, recombina 30.3 1E+02 0.0034 29.3 6.9 41 11-52 64-104 (356)
192 1efv_B Electron transfer flavo 30.3 43 0.0015 30.2 4.1 32 110-141 114-151 (255)
193 1kyq_A Met8P, siroheme biosynt 30.3 3.1E+02 0.011 24.8 12.4 88 358-452 106-210 (274)
194 3qha_A Putative oxidoreductase 30.2 26 0.00088 32.3 2.6 32 10-47 15-46 (296)
195 3fwz_A Inner membrane protein 30.2 21 0.0007 28.6 1.7 33 10-48 7-39 (140)
196 3l6u_A ABC-type sugar transpor 30.2 2.8E+02 0.0097 24.4 9.9 31 111-141 63-97 (293)
197 1hdo_A Biliverdin IX beta redu 30.2 46 0.0016 28.0 4.2 34 10-48 3-36 (206)
198 3q0i_A Methionyl-tRNA formyltr 30.1 71 0.0024 29.8 5.6 35 8-48 5-39 (318)
199 1d4o_A NADP(H) transhydrogenas 30.0 49 0.0017 27.6 3.8 39 10-49 22-63 (184)
200 3alj_A 2-methyl-3-hydroxypyrid 29.6 32 0.0011 32.7 3.3 34 7-46 8-41 (379)
201 4edh_A DTMP kinase, thymidylat 29.3 2.7E+02 0.0093 23.8 9.5 40 7-47 3-42 (213)
202 2d1p_B TUSC, hypothetical UPF0 29.3 67 0.0023 24.9 4.6 35 13-48 5-41 (119)
203 1e2b_A Enzyme IIB-cellobiose; 29.3 72 0.0025 24.2 4.6 40 8-48 1-40 (106)
204 1efp_B ETF, protein (electron 29.1 43 0.0015 30.1 3.9 31 111-141 112-148 (252)
205 1dhr_A Dihydropteridine reduct 29.1 51 0.0017 28.9 4.4 39 6-48 2-40 (241)
206 2w36_A Endonuclease V; hypoxan 29.1 33 0.0011 30.3 2.9 41 98-140 91-138 (225)
207 1pjq_A CYSG, siroheme synthase 28.9 3.7E+02 0.013 26.2 11.0 144 271-451 13-167 (457)
208 3p9x_A Phosphoribosylglycinami 28.5 2.9E+02 0.0098 23.9 12.1 106 10-142 2-112 (211)
209 3dfu_A Uncharacterized protein 28.4 37 0.0013 30.2 3.2 33 9-47 5-37 (232)
210 3hn2_A 2-dehydropantoate 2-red 28.2 41 0.0014 31.2 3.7 32 11-48 3-34 (312)
211 2fsv_C NAD(P) transhydrogenase 28.1 54 0.0018 27.9 3.9 39 10-49 46-87 (203)
212 2hy5_A Putative sulfurtransfer 28.0 73 0.0025 25.0 4.7 35 13-48 4-41 (130)
213 4e12_A Diketoreductase; oxidor 27.8 39 0.0013 30.8 3.4 33 8-46 2-34 (283)
214 3eag_A UDP-N-acetylmuramate:L- 27.7 52 0.0018 30.7 4.3 32 10-46 4-35 (326)
215 4e3z_A Putative oxidoreductase 27.5 68 0.0023 28.7 5.0 38 6-47 21-58 (272)
216 3k96_A Glycerol-3-phosphate de 27.4 33 0.0011 32.7 2.9 33 10-48 29-61 (356)
217 3i83_A 2-dehydropantoate 2-red 27.3 43 0.0015 31.2 3.6 33 11-49 3-35 (320)
218 1djl_A Transhydrogenase DIII; 27.3 57 0.0019 27.9 3.9 39 10-49 45-86 (207)
219 3hwr_A 2-dehydropantoate 2-red 27.1 37 0.0013 31.6 3.2 31 9-45 18-48 (318)
220 3doj_A AT3G25530, dehydrogenas 27.1 40 0.0014 31.2 3.4 35 7-47 18-52 (310)
221 2a5l_A Trp repressor binding p 27.0 74 0.0025 26.8 4.9 39 8-47 3-42 (200)
222 2qk4_A Trifunctional purine bi 27.0 2.2E+02 0.0074 27.6 9.0 34 10-48 24-57 (452)
223 1qv9_A F420-dependent methylen 26.8 63 0.0022 28.6 4.2 35 109-143 61-101 (283)
224 2bi7_A UDP-galactopyranose mut 26.7 39 0.0013 32.4 3.3 35 8-48 1-35 (384)
225 1p9o_A Phosphopantothenoylcyst 26.7 45 0.0015 31.1 3.5 38 11-49 37-89 (313)
226 3ors_A N5-carboxyaminoimidazol 26.3 2.8E+02 0.0094 22.9 8.4 141 272-452 4-154 (163)
227 2vo1_A CTP synthase 1; pyrimid 26.3 67 0.0023 29.2 4.4 44 8-52 20-66 (295)
228 4g6h_A Rotenone-insensitive NA 26.2 28 0.00094 35.0 2.2 35 9-49 41-75 (502)
229 3cmu_A Protein RECA, recombina 26.1 2E+02 0.007 34.2 9.5 42 10-52 1427-1468(2050)
230 2zki_A 199AA long hypothetical 26.1 75 0.0026 26.8 4.8 37 10-48 4-41 (199)
231 4eg0_A D-alanine--D-alanine li 26.0 57 0.0019 30.1 4.3 38 10-48 13-54 (317)
232 1g63_A Epidermin modifying enz 25.8 48 0.0017 28.1 3.3 36 12-49 4-39 (181)
233 3rot_A ABC sugar transporter, 25.7 3.5E+02 0.012 23.9 11.5 31 111-141 60-94 (297)
234 3slg_A PBGP3 protein; structur 25.6 50 0.0017 31.1 3.9 40 5-48 19-58 (372)
235 3of5_A Dethiobiotin synthetase 25.6 64 0.0022 28.4 4.3 33 13-46 7-40 (228)
236 3kke_A LACI family transcripti 25.5 3.6E+02 0.012 24.0 10.3 31 110-141 69-102 (303)
237 3da8_A Probable 5'-phosphoribo 25.3 2.6E+02 0.0089 24.2 8.1 102 290-429 79-182 (215)
238 1ks9_A KPA reductase;, 2-dehyd 25.3 48 0.0017 29.9 3.6 32 11-48 1-32 (291)
239 2x5e_A UPF0271 protein PA4511; 25.0 54 0.0018 29.3 3.5 110 15-138 39-171 (252)
240 2b69_A UDP-glucuronate decarbo 24.9 56 0.0019 30.4 4.0 39 5-48 22-60 (343)
241 3huu_A Transcription regulator 24.9 3.3E+02 0.011 24.3 9.4 32 110-141 81-114 (305)
242 4e21_A 6-phosphogluconate dehy 24.8 45 0.0015 31.7 3.3 35 7-47 19-53 (358)
243 3sbx_A Putative uncharacterize 24.8 99 0.0034 26.4 5.1 42 5-48 8-53 (189)
244 3i6i_A Putative leucoanthocyan 24.8 42 0.0014 31.4 3.1 39 6-49 6-44 (346)
245 1e4e_A Vancomycin/teicoplanin 24.4 46 0.0016 31.2 3.3 40 8-48 1-44 (343)
246 1fy2_A Aspartyl dipeptidase; s 24.3 1.2E+02 0.0043 26.5 6.0 44 259-304 22-65 (229)
247 3obb_A Probable 3-hydroxyisobu 24.2 71 0.0024 29.5 4.5 30 11-46 4-33 (300)
248 1evy_A Glycerol-3-phosphate de 24.1 23 0.0008 33.7 1.1 30 12-47 17-46 (366)
249 2h78_A Hibadh, 3-hydroxyisobut 24.1 55 0.0019 30.0 3.7 32 10-47 3-34 (302)
250 3e8x_A Putative NAD-dependent 24.0 49 0.0017 28.8 3.3 38 6-48 17-54 (236)
251 4dim_A Phosphoribosylglycinami 24.0 68 0.0023 30.7 4.6 34 8-47 5-38 (403)
252 3gv0_A Transcriptional regulat 24.0 3.1E+02 0.01 24.2 8.9 32 110-141 64-97 (288)
253 3c24_A Putative oxidoreductase 23.7 44 0.0015 30.4 2.9 31 10-46 11-42 (286)
254 1f0y_A HCDH, L-3-hydroxyacyl-C 23.7 40 0.0014 31.0 2.7 33 9-47 14-46 (302)
255 1rkx_A CDP-glucose-4,6-dehydra 23.7 62 0.0021 30.2 4.1 38 6-48 5-42 (357)
256 1ydg_A Trp repressor binding p 23.6 96 0.0033 26.4 5.0 38 9-47 5-43 (211)
257 2jk1_A HUPR, hydrogenase trans 23.5 2E+02 0.0069 21.9 6.7 49 379-432 71-119 (139)
258 2hy5_B Intracellular sulfur ox 23.4 92 0.0031 24.9 4.5 35 13-48 9-45 (136)
259 3cky_A 2-hydroxymethyl glutara 23.1 77 0.0026 28.8 4.5 31 10-46 4-34 (301)
260 4gi5_A Quinone reductase; prot 22.9 1.1E+02 0.0038 27.9 5.4 38 8-46 20-60 (280)
261 4g65_A TRK system potassium up 22.8 21 0.00071 35.5 0.5 33 10-48 3-35 (461)
262 2zr9_A Protein RECA, recombina 22.7 1.9E+02 0.0065 27.2 7.3 41 11-52 62-102 (349)
263 3cmw_A Protein RECA, recombina 22.7 2E+02 0.0067 33.6 8.4 103 13-140 386-517 (1706)
264 2i87_A D-alanine-D-alanine lig 22.6 43 0.0015 31.7 2.7 40 8-48 1-44 (364)
265 3l4b_C TRKA K+ channel protien 22.4 26 0.00087 30.5 1.0 32 11-48 1-32 (218)
266 2r6j_A Eugenol synthase 1; phe 22.4 65 0.0022 29.5 3.9 33 12-49 13-45 (318)
267 3obi_A Formyltetrahydrofolate 22.4 1.4E+02 0.0047 27.4 6.0 103 290-430 156-260 (288)
268 3pdi_B Nitrogenase MOFE cofact 22.3 54 0.0018 32.4 3.4 31 105-138 368-398 (458)
269 2raf_A Putative dinucleotide-b 22.2 64 0.0022 27.8 3.6 32 10-47 19-50 (209)
270 3nrb_A Formyltetrahydrofolate 22.2 1.3E+02 0.0044 27.5 5.7 103 290-430 155-259 (287)
271 3ew7_A LMO0794 protein; Q8Y8U8 22.2 70 0.0024 27.2 3.9 33 11-48 1-33 (221)
272 3h2s_A Putative NADH-flavin re 22.1 71 0.0024 27.3 3.9 33 11-48 1-33 (224)
273 3tqr_A Phosphoribosylglycinami 22.0 1.8E+02 0.0063 25.2 6.5 102 290-429 73-176 (215)
274 1meo_A Phosophoribosylglycinam 22.0 3E+02 0.01 23.6 7.9 102 290-429 69-172 (209)
275 1p3y_1 MRSD protein; flavoprot 22.0 3E+02 0.01 23.4 7.7 79 352-432 75-186 (194)
276 3aek_B Light-independent proto 22.0 3.3E+02 0.011 27.2 9.3 26 110-138 347-372 (525)
277 1rcu_A Conserved hypothetical 21.9 48 0.0016 28.5 2.6 36 353-388 112-150 (195)
278 2h31_A Multifunctional protein 21.8 5.5E+02 0.019 24.8 10.6 138 271-451 265-411 (425)
279 3goc_A Endonuclease V; alpha-b 21.7 63 0.0022 28.7 3.3 40 98-139 95-141 (237)
280 3nrb_A Formyltetrahydrofolate 21.7 4.3E+02 0.015 23.9 9.2 108 9-142 87-196 (287)
281 2d1p_A TUSD, hypothetical UPF0 21.6 1.3E+02 0.0045 24.1 5.1 37 11-48 13-53 (140)
282 3i4f_A 3-oxoacyl-[acyl-carrier 21.6 79 0.0027 28.0 4.2 34 11-48 7-40 (264)
283 1v5e_A Pyruvate oxidase; oxido 21.6 2.8E+02 0.0097 28.1 8.9 27 361-387 69-101 (590)
284 3ll8_B Calcineurin subunit B t 21.5 92 0.0031 24.4 4.2 64 409-475 84-147 (155)
285 3pgx_A Carveol dehydrogenase; 21.3 76 0.0026 28.6 4.0 38 5-47 10-47 (280)
286 3k4h_A Putative transcriptiona 21.3 4.1E+02 0.014 23.2 10.7 32 110-141 67-100 (292)
287 3sbx_A Putative uncharacterize 21.3 3E+02 0.01 23.2 7.5 43 346-388 94-146 (189)
288 3kxe_C Antitoxin protein PARD- 21.2 1.2E+02 0.0041 22.2 4.3 51 419-475 31-81 (88)
289 3dtt_A NADP oxidoreductase; st 21.2 62 0.0021 28.7 3.3 37 6-48 15-51 (245)
290 3rp8_A Flavoprotein monooxygen 21.1 57 0.002 31.2 3.3 35 6-46 19-53 (407)
291 3f6r_A Flavodoxin; FMN binding 21.1 1.1E+02 0.0036 24.4 4.5 37 11-48 2-39 (148)
292 1z82_A Glycerol-3-phosphate de 20.9 58 0.002 30.4 3.2 31 11-47 15-45 (335)
293 2pju_A Propionate catabolism o 20.9 96 0.0033 27.3 4.4 28 359-389 64-91 (225)
294 2bw0_A 10-FTHFDH, 10-formyltet 20.9 1.4E+02 0.0049 27.9 5.9 34 8-47 20-53 (329)
295 3n0v_A Formyltetrahydrofolate 20.8 4.7E+02 0.016 23.7 11.4 105 9-142 89-197 (286)
296 3enk_A UDP-glucose 4-epimerase 20.8 1.3E+02 0.0044 27.6 5.7 34 10-48 5-38 (341)
297 2gkg_A Response regulator homo 20.8 1.4E+02 0.0049 22.0 5.1 48 378-432 78-125 (127)
298 3o1l_A Formyltetrahydrofolate 20.8 2.5E+02 0.0084 25.9 7.4 104 289-430 170-275 (302)
299 2rcy_A Pyrroline carboxylate r 20.8 28 0.00097 31.1 0.9 34 8-47 2-39 (262)
300 2z1m_A GDP-D-mannose dehydrata 20.7 77 0.0026 29.2 4.0 35 9-48 2-36 (345)
301 3ego_A Probable 2-dehydropanto 20.6 52 0.0018 30.4 2.7 32 10-48 2-33 (307)
302 3lou_A Formyltetrahydrofolate 20.5 1.6E+02 0.0054 27.0 6.0 103 290-430 161-265 (292)
303 4hs4_A Chromate reductase; tri 20.4 50 0.0017 28.4 2.4 38 5-43 1-40 (199)
304 1cp2_A CP2, nitrogenase iron p 20.4 83 0.0028 28.0 4.1 36 12-48 3-38 (269)
305 1qyd_A Pinoresinol-lariciresin 20.4 93 0.0032 28.2 4.5 34 10-48 4-37 (313)
306 3kcq_A Phosphoribosylglycinami 20.3 2.1E+02 0.007 24.9 6.4 102 290-429 72-175 (215)
307 3m6m_D Sensory/regulatory prot 20.3 87 0.003 24.4 3.8 33 110-142 56-99 (143)
308 1wek_A Hypothetical protein TT 20.2 1.3E+02 0.0045 26.2 5.1 43 4-47 31-77 (217)
309 3g0o_A 3-hydroxyisobutyrate de 20.2 50 0.0017 30.3 2.6 32 10-47 7-38 (303)
310 2ywx_A Phosphoribosylaminoimid 20.2 3.6E+02 0.012 22.1 9.5 132 275-451 3-143 (157)
311 1xmp_A PURE, phosphoribosylami 20.2 3.8E+02 0.013 22.3 11.1 146 271-455 11-165 (170)
312 4ds3_A Phosphoribosylglycinami 20.1 2.2E+02 0.0074 24.6 6.5 102 290-429 76-179 (209)
No 1
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1.7e-64 Score=520.26 Aligned_cols=462 Identities=64% Similarity=1.109 Sum_probs=343.5
Q ss_pred hhhccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCC--CCchhhhhhhhcCCCceeEEEec-CCCCCCCc
Q 045267 5 LQAQAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDG--PPSEAQKSTLESLPSSINSVFLP-VSLNDVAE 81 (482)
Q Consensus 5 ~~~~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~ 81 (482)
|++.+++||+++|+|+.||++|++.||++|++|+||+|||++++.+ ... ..........+++|..++ ....+...
T Consensus 1 M~~~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~--~~~~~~~~~~~i~~~~l~~~~~~~~~~ 78 (480)
T 2vch_A 1 MEESKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKA--QRTVLDSLPSSISSVFLPPVDLTDLSS 78 (480)
T ss_dssp -----CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-C--HHHHHC-CCTTEEEEECCCCCCTTSCT
T ss_pred CCCCCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhh--hhhhccccCCCceEEEcCCCCCCCCCC
Confidence 3445568999999999999999999999998744999999998863 221 111111113478999888 22111111
Q ss_pred chhhHHHHHHHHHhhhHHHHHHHHHHhhCCCc-cEEEeCCCCccHHHHHHHcCCccEEEccchHHHHHHHhhhhhhhccC
Q 045267 82 DARAETVISLTVLRSLPCLRQELTSLVAKATV-AALVVDLFGTDAFDVAQEFNISPYIFYPSTAMCLSLFLHLEKLDQMV 160 (482)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p-D~vi~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~ 160 (482)
.......+........+.+++.++++.+..++ |+||+|.+..|+..+|+++|||++.++++++...+.+.+.+...+..
T Consensus 79 ~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 158 (480)
T 2vch_A 79 STRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETV 158 (480)
T ss_dssp TCCHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHC
T ss_pred chhHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcC
Confidence 11112222233333445555555554333578 99999999999999999999999999999888777776666443322
Q ss_pred CCCCcccCCCCcccCCCCCccccCCCCcccccccchHHHHHHHHHhhcccccEEEEcCccccchhHHHHhhhcCCCCCCC
Q 045267 161 PRDCEYRDMSEPVQIPGCIPVHGGYLLDPVQDRKNEAYRWVLHHAKRYKLAEGIIVNSFTDLEGGALKALQHQDEPGKPP 240 (482)
Q Consensus 161 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~p~~p~ 240 (482)
. ..+.+...+..+|++.++...+++..+.++....++.+......++...++++|++.+++..+...+.+ +++..|+
T Consensus 159 ~--~~~~~~~~~~~~Pg~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~-~~~~~~~ 235 (480)
T 2vch_A 159 S--CEFRELTEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQE-PGLDKPP 235 (480)
T ss_dssp C--SCGGGCSSCBCCTTCCCBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHS-CCTTCCC
T ss_pred C--CcccccCCcccCCCCCCCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHh-cccCCCc
Confidence 2 112221223346888777777777766655445556666666677778889999999999999888887 2323579
Q ss_pred eEeeccCcCCCCCC--ccccccccccccCCCCCcEEEEeccCCCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCCCCCcc
Q 045267 241 VYPVGPLVKTGSTA--ESKNEGCLKWLDDQPLGSVLFVSFGSGGTLSCEQLNELALGLEMSEQRFLWVVRSPNNAANSTF 318 (482)
Q Consensus 241 ~~~vGp~~~~~~~~--~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~ 318 (482)
+++|||++...... ...++++.+||+.++++++|||||||+...+.+++.+++.+|+..+.+|||+++........++
T Consensus 236 v~~vGpl~~~~~~~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~ 315 (480)
T 2vch_A 236 VYPVGPLVNIGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIANSSY 315 (480)
T ss_dssp EEECCCCCCCSCSCC-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTT
T ss_pred EEEEeccccccccccCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCccccccccc
Confidence 99999998754221 2356788999999888899999999998889999999999999999999999986431000000
Q ss_pred cccCCCCCCCCCCchhHHhhhcCCCeeeccccchhhhhhcccccccccccCchhHHHHhhcCCcEeeccccccchhhHHH
Q 045267 319 FSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWAPQAQVLSHGSTGGFLCHCGWNSVLESVVNGVPLIAWPLYAEQKMNAVI 398 (482)
Q Consensus 319 ~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ipq~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~r 398 (482)
+...+..+....+|++|.++.+..++++.+|+||.+||+|++|++||||||+||++||+++|||||++|+++||+.||++
T Consensus 316 ~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~ 395 (480)
T 2vch_A 316 FDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVL 395 (480)
T ss_dssp TCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHH
T ss_pred cccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccchHHHHH
Confidence 00000001113589999999988888887899999999999999999999999999999999999999999999999999
Q ss_pred H-HhhcceeeeeccCCCCccCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHhh
Q 045267 399 L-TEDVKLALRPKANENGIVGRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQLASKWNN 472 (482)
Q Consensus 399 v-~~~~G~G~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~ 472 (482)
+ ++ +|+|+.++..+++.+++++|+++|+++|.++++.+||+||+++++++++++.+||++.+++++|++.+++
T Consensus 396 l~~~-~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~~~ 469 (480)
T 2vch_A 396 LSED-IRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKA 469 (480)
T ss_dssp HHHT-TCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHH
T ss_pred HHHH-hCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 7 67 9999999876333499999999999999855456899999999999999999999999999999999876
No 2
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=4.9e-65 Score=516.27 Aligned_cols=435 Identities=25% Similarity=0.388 Sum_probs=343.9
Q ss_pred hhhccCCEEEEEcCCCCCChHHHHHHHHHHHhcCC--CEEEEEcCCCCCCchhhhhhhhcC---CCceeEEEecCCC-CC
Q 045267 5 LQAQAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHH--FLVTFFIPSDGPPSEAQKSTLESL---PSSINSVFLPVSL-ND 78 (482)
Q Consensus 5 ~~~~~~~~ili~~~~~~GH~~P~l~La~~L~~r~G--H~Vt~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~-~~ 78 (482)
|....+.||+++|+|++||++|++.||+.|+++ | |.|||++++.+ ...+.... ..+++|..+|... ++
T Consensus 8 M~~~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~-g~~~~vT~~~t~~~-----~~~~~~~~~~~~~~i~~~~ipdglp~~ 81 (454)
T 3hbf_A 8 MNGNNLLHVAVLAFPFGTHAAPLLSLVKKIATE-APKVTFSFFCTTTT-----NDTLFSRSNEFLPNIKYYNVHDGLPKG 81 (454)
T ss_dssp ----CCCEEEEECCCSSSSHHHHHHHHHHHHHH-CTTSEEEEEECHHH-----HHHSCSSSSCCCTTEEEEECCCCCCTT
T ss_pred ccCCCCCEEEEEcCCcccHHHHHHHHHHHHHhC-CCCEEEEEEeCHHH-----HHhhhcccccCCCCceEEecCCCCCCC
Confidence 334457899999999999999999999999998 9 99999998632 22222211 2469999988111 11
Q ss_pred CCcchhhHHHHHHHHHhhhHHHHHHHHHHhh--CCCccEEEeCCCCccHHHHHHHcCCccEEEccchHHHHHHHhhhhhh
Q 045267 79 VAEDARAETVISLTVLRSLPCLRQELTSLVA--KATVAALVVDLFGTDAFDVAQEFNISPYIFYPSTAMCLSLFLHLEKL 156 (482)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~pD~vi~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~ 156 (482)
.....+....+..+.....+.+++.++++++ ..++|+||+|.+.+|+..+|+++|||++.|+++++..++.+++.+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~ 161 (454)
T 3hbf_A 82 YVSSGNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLI 161 (454)
T ss_dssp CCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHH
T ss_pred ccccCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHH
Confidence 1111112223333444445566677766543 35799999999999999999999999999999999998888877655
Q ss_pred hccCCCCCcccCCCCcc-cCCCCCccccCCCCcccc-cccchHHHHHHHHHhhcccccEEEEcCccccchhHHHHhhhcC
Q 045267 157 DQMVPRDCEYRDMSEPV-QIPGCIPVHGGYLLDPVQ-DRKNEAYRWVLHHAKRYKLAEGIIVNSFTDLEGGALKALQHQD 234 (482)
Q Consensus 157 ~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~ 234 (482)
.+.... .......++ .+||++++...+++..+. +.....++.+.+..+....++++++||+++||+++.+++.+.
T Consensus 162 ~~~~~~--~~~~~~~~~~~iPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~- 238 (454)
T 3hbf_A 162 REKTGS--KEVHDVKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSK- 238 (454)
T ss_dssp HHTCCH--HHHTTSSCBCCSTTSCCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTT-
T ss_pred HhhcCC--CccccccccccCCCCCCcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhc-
Confidence 443210 000011233 379988888888888765 333345555666667788889999999999999988887753
Q ss_pred CCCCCCeEeeccCcCCCCCC-ccccccccccccCCCCCcEEEEeccCCCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCC
Q 045267 235 EPGKPPVYPVGPLVKTGSTA-ESKNEGCLKWLDDQPLGSVLFVSFGSGGTLSCEQLNELALGLEMSEQRFLWVVRSPNNA 313 (482)
Q Consensus 235 ~p~~p~~~~vGp~~~~~~~~-~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~ 313 (482)
.|++++|||++...... ...++++.+||+.++++++|||||||+...+.+++.+++.+|+..+.+|||+++...
T Consensus 239 ---~~~v~~vGPl~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~-- 313 (454)
T 3hbf_A 239 ---FKLLLNVGPFNLTTPQRKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDP-- 313 (454)
T ss_dssp ---SSCEEECCCHHHHSCCSCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCH--
T ss_pred ---CCCEEEECCcccccccccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcc--
Confidence 47999999998643321 233578999999998899999999999988999999999999999999999997632
Q ss_pred CCCcccccCCCCCCCCCCchhHHhhhcCCCeeeccccchhhhhhcccccccccccCchhHHHHhhcCCcEeeccccccch
Q 045267 314 ANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWAPQAQVLSHGSTGGFLCHCGWNSVLESVVNGVPLIAWPLYAEQK 393 (482)
Q Consensus 314 ~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ipq~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~ 393 (482)
...+|++|.++.. .|+++++|+||.++|+|++|++||||||+||+.||+++|||||++|+++||+
T Consensus 314 --------------~~~lp~~~~~~~~-~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~ 378 (454)
T 3hbf_A 314 --------------KEKLPKGFLERTK-TKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQG 378 (454)
T ss_dssp --------------HHHSCTTHHHHTT-TTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHH
T ss_pred --------------hhcCCHhHHhhcC-CceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHH
Confidence 2357888887765 5777779999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHhhcceeeeeccCCCCccCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHh
Q 045267 394 MNAVILTEDVKLALRPKANENGIVGRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQLASKWN 471 (482)
Q Consensus 394 ~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~ 471 (482)
.||+++++.+|+|+.++... +++++|+++|+++|.|+.+++||+||+++++++++++++|||+.+++++|++.+.
T Consensus 379 ~Na~~v~~~~g~Gv~l~~~~---~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 379 LNTILTESVLEIGVGVDNGV---LTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp HHHHHHHTTSCSEEECGGGS---CCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhCeeEEecCCC---CCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 99999999349999998777 9999999999999988667789999999999999999999999999999999875
No 3
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=7.1e-59 Score=476.66 Aligned_cols=434 Identities=34% Similarity=0.591 Sum_probs=330.3
Q ss_pred ccCCEEEEEcCCCCCChHHHHHHHHHHHhcC-CCEEEEEcCCCCCCc---hhhhhhhhcCCCceeEEEec-CCCCCC--C
Q 045267 8 QAAPHIVLLPSPGMGHLIPLIEFAKRLVHRH-HFLVTFFIPSDGPPS---EAQKSTLESLPSSINSVFLP-VSLNDV--A 80 (482)
Q Consensus 8 ~~~~~ili~~~~~~GH~~P~l~La~~L~~r~-GH~Vt~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~-~~~~~~--~ 80 (482)
++++||+++|+|+.||++|++.||+.|++|+ ||+|||++++.+.+. ...... .....+++|..+| ....+. .
T Consensus 7 ~~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~-~~~~~~i~~~~lp~~~~~~~~~~ 85 (463)
T 2acv_A 7 NKNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSV-LASQPQIQLIDLPEVEPPPQELL 85 (463)
T ss_dssp HHCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHH-HCSCTTEEEEECCCCCCCCGGGG
T ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhc-ccCCCCceEEECCCCCCCccccc
Confidence 3567999999999999999999999998765 999999998875431 111111 1123479999998 322110 0
Q ss_pred cchhhHHHHHHHHHhhhHHHHHHHHHHhhCCCccEEEeCCCCccHHHHHHHcCCccEEEccchHHHHHHHhhhhhhhccC
Q 045267 81 EDARAETVISLTVLRSLPCLRQELTSLVAKATVAALVVDLFGTDAFDVAQEFNISPYIFYPSTAMCLSLFLHLEKLDQMV 160 (482)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~pD~vi~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~ 160 (482)
.+.... +...+....+.+++.++++ +..+||+||+|.+..|+..+|+++|||+++++++++...+.+.+.+.....
T Consensus 86 ~~~~~~--~~~~~~~~~~~~~~ll~~~-~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~- 161 (463)
T 2acv_A 86 KSPEFY--ILTFLESLIPHVKATIKTI-LSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIE- 161 (463)
T ss_dssp GSHHHH--HHHHHHHTHHHHHHHHHHH-CCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTT-
T ss_pred CCccHH--HHHHHHhhhHHHHHHHHhc-cCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhccc-
Confidence 111111 3233333444555555543 336899999999999999999999999999999988877776665543211
Q ss_pred CCCCcccCCCC---cccCCCC-CccccCCCCcccccccchHHHHHHHHHhhcccccEEEEcCccccchhHHHHhhhcCCC
Q 045267 161 PRDCEYRDMSE---PVQIPGC-IPVHGGYLLDPVQDRKNEAYRWVLHHAKRYKLAEGIIVNSFTDLEGGALKALQHQDEP 236 (482)
Q Consensus 161 ~~~~~~~~~~~---~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~p 236 (482)
..+.+... ...+|++ .++...+++..+.++ ...+..+......++.++++++|+++++|......+.+..+|
T Consensus 162 ---~~~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~p 237 (463)
T 2acv_A 162 ---EVFDDSDRDHQLLNIPGISNQVPSNVLPDACFNK-DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEK 237 (463)
T ss_dssp ---CCCCCSSGGGCEECCTTCSSCEEGGGSCHHHHCT-TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTT
T ss_pred ---CCCCCccccCceeECCCCCCCCChHHCchhhcCC-chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhcccc
Confidence 11111111 3346887 777777777665555 345555556666677888899999999999998888775444
Q ss_pred CCCCeEeeccCcCCCC-CC-c---cccccccccccCCCCCcEEEEeccCCC-CCCHHHHHHHHHHHHhcCCceEEEEeCC
Q 045267 237 GKPPVYPVGPLVKTGS-TA-E---SKNEGCLKWLDDQPLGSVLFVSFGSGG-TLSCEQLNELALGLEMSEQRFLWVVRSP 310 (482)
Q Consensus 237 ~~p~~~~vGp~~~~~~-~~-~---~~~~~~~~~l~~~~~~~~v~vs~GS~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~ 310 (482)
.|++++|||++.... .. . ..+.++.+|++.++++++|||||||+. ..+.+.+.+++.+|+..+.+|||+++.+
T Consensus 238 -~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~ 316 (463)
T 2acv_A 238 -IPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAE 316 (463)
T ss_dssp -SCCEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCC
T ss_pred -CCcEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 578999999986542 10 1 345688999999888899999999998 7888889999999999999999999752
Q ss_pred CCCCCCcccccCCCCCCCCCCchhHHhhhc-CCCeeeccccchhhhhhcccccccccccCchhHHHHhhcCCcEeecccc
Q 045267 311 NNAANSTFFSVNSHKDPYDFLPKGFLDRTK-GRGMLVPSWAPQAQVLSHGSTGGFLCHCGWNSVLESVVNGVPLIAWPLY 389 (482)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~v~~~~~ipq~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~ 389 (482)
. +.+|+++.++.. +.|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++
T Consensus 317 ~-----------------~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~ 379 (463)
T 2acv_A 317 K-----------------KVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIY 379 (463)
T ss_dssp G-----------------GGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCS
T ss_pred c-----------------ccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccch
Confidence 0 136777776651 3477788899999999999988999999999999999999999999999
Q ss_pred ccchhhHHHH-Hhhcceeeee-ccCCCC--ccCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcCCchHHHHHH
Q 045267 390 AEQKMNAVIL-TEDVKLALRP-KANENG--IVGRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQ 465 (482)
Q Consensus 390 ~DQ~~na~rv-~~~~G~G~~l-~~~~~~--~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~ 465 (482)
.||+.||+++ ++ +|+|+.+ +..+++ .++++.|+++|+++|+++ ++||+||+++++++++++.+||++.+++++
T Consensus 380 ~dQ~~Na~~lv~~-~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~--~~~r~~a~~l~~~~~~a~~~gGss~~~l~~ 456 (463)
T 2acv_A 380 AEQQLNAFRLVKE-WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKD--SIVHKKVQEMKEMSRNAVVDGGSSLISVGK 456 (463)
T ss_dssp TTHHHHHHHHHHT-SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTT--CTHHHHHHHHHHHHHHHTSTTSHHHHHHHH
T ss_pred hhhHHHHHHHHHH-cCeEEEEecccCCCCccccHHHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHhcCCcHHHHHHH
Confidence 9999999995 78 9999999 311111 389999999999999732 289999999999999999999999999999
Q ss_pred HHHHHh
Q 045267 466 LASKWN 471 (482)
Q Consensus 466 ~~~~~~ 471 (482)
|+++++
T Consensus 457 ~v~~~~ 462 (463)
T 2acv_A 457 LIDDIT 462 (463)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 999885
No 4
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=6.4e-59 Score=480.14 Aligned_cols=443 Identities=29% Similarity=0.521 Sum_probs=316.6
Q ss_pred CchhhhhccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCCchhhhhhhhc-----CC--CceeEEEec
Q 045267 1 MEQTLQAQAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPPSEAQKSTLES-----LP--SSINSVFLP 73 (482)
Q Consensus 1 ~~~~~~~~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~l~ 73 (482)
|+-++ |+++||+++|+|+.||++|++.||++|++| ||+|||++++.+.+ .+... .. .+++|..++
T Consensus 1 ~~~~~--~~~~~vl~~p~p~~GHi~P~l~La~~L~~r-G~~VT~v~t~~~~~-----~~~~~~~~~~~~~~~~i~~~~l~ 72 (482)
T 2pq6_A 1 MGNFA--NRKPHVVMIPYPVQGHINPLFKLAKLLHLR-GFHITFVNTEYNHK-----RLLKSRGPKAFDGFTDFNFESIP 72 (482)
T ss_dssp ---------CCEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEEEHHHHH-----HHC------------CEEEEEEC
T ss_pred CCccc--CCCCEEEEecCccchhHHHHHHHHHHHHhC-CCeEEEEeCCchhh-----hhccccccccccCCCceEEEECC
Confidence 44444 567899999999999999999999999998 99999999874322 11111 01 268888887
Q ss_pred CCCCCC---CcchhhHHHHHHHH-HhhhHHHHHHHHHHhh---CCCccEEEeCCCCccHHHHHHHcCCccEEEccchHHH
Q 045267 74 VSLNDV---AEDARAETVISLTV-LRSLPCLRQELTSLVA---KATVAALVVDLFGTDAFDVAQEFNISPYIFYPSTAMC 146 (482)
Q Consensus 74 ~~~~~~---~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~---~~~pD~vi~D~~~~~~~~~A~~lgIP~v~~~~~~~~~ 146 (482)
-..... .........+...+ ....+.+++.++++.+ ..+||+||+|.+.+|+..+|+++|||++.++++++..
T Consensus 73 ~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~ 152 (482)
T 2pq6_A 73 DGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACS 152 (482)
T ss_dssp CCCC---------CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHH
T ss_pred CCCCCcccccCcchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHH
Confidence 211110 00000111111111 2233444455544432 3589999999999999999999999999999998876
Q ss_pred HHHHhhhhhhhc--cCCCCC-cc-cC--CCCcc-cCCCCCccccCCCCcccccc--cchHHHHHHHHHhhcccccEEEEc
Q 045267 147 LSLFLHLEKLDQ--MVPRDC-EY-RD--MSEPV-QIPGCIPVHGGYLLDPVQDR--KNEAYRWVLHHAKRYKLAEGIIVN 217 (482)
Q Consensus 147 ~~~~~~~~~~~~--~~~~~~-~~-~~--~~~~~-~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 217 (482)
...+.+.+.... ..+... .+ .+ ..... .+|++.++...+++..+... .....+.+..........+.+++|
T Consensus 153 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~n 232 (482)
T 2pq6_A 153 LLNVMHFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLN 232 (482)
T ss_dssp HHHHTTHHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEES
T ss_pred HHHHHHHHHHHhcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEc
Confidence 665544432211 111100 00 00 01111 24565555555555444221 122233333344556778889999
Q ss_pred CccccchhHHHHhhhcCCCCCCCeEeeccCcCC-CCC-----------C-ccccccccccccCCCCCcEEEEeccCCCCC
Q 045267 218 SFTDLEGGALKALQHQDEPGKPPVYPVGPLVKT-GST-----------A-ESKNEGCLKWLDDQPLGSVLFVSFGSGGTL 284 (482)
Q Consensus 218 s~~~l~~~~~~~~~~~~~p~~p~~~~vGp~~~~-~~~-----------~-~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~ 284 (482)
++++||+++.+.+.+. .|++++|||++.. +.. . ++.+.++.+|++.++++++|||||||+...
T Consensus 233 t~~~le~~~~~~~~~~----~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~ 308 (482)
T 2pq6_A 233 TFNELESDVINALSST----IPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVM 308 (482)
T ss_dssp SCGGGGHHHHHHHHTT----CTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCC
T ss_pred ChHHHhHHHHHHHHHh----CCcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccC
Confidence 9999999877766653 3789999999763 111 0 123456789999988889999999999888
Q ss_pred CHHHHHHHHHHHHhcCCceEEEEeCCCCCCCCcccccCCCCCCCCCCchhHHhhhcCCCeeeccccchhhhhhccccccc
Q 045267 285 SCEQLNELALGLEMSEQRFLWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWAPQAQVLSHGSTGGF 364 (482)
Q Consensus 285 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ipq~~lL~~~~~~~~ 364 (482)
+.+.+.+++.+|+..+.+|+|+++.+... .....+|+++.++. +.|+++++|+||.++|+|+++++|
T Consensus 309 ~~~~~~~~~~~l~~~~~~~l~~~~~~~~~------------~~~~~l~~~~~~~~-~~~~~v~~~~pq~~~L~h~~~~~~ 375 (482)
T 2pq6_A 309 TPEQLLEFAWGLANCKKSFLWIIRPDLVI------------GGSVIFSSEFTNEI-ADRGLIASWCPQDKVLNHPSIGGF 375 (482)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCGGGST------------TTGGGSCHHHHHHH-TTTEEEESCCCHHHHHTSTTEEEE
T ss_pred CHHHHHHHHHHHHhcCCcEEEEEcCCccc------------cccccCcHhHHHhc-CCCEEEEeecCHHHHhcCCCCCEE
Confidence 88889999999999999999999753210 01123788887776 468888999999999999998899
Q ss_pred ccccCchhHHHHhhcCCcEeeccccccchhhHHHHH-hhcceeeeeccCCCCccCHHHHHHHHHHHhcCCchHHHHHHHH
Q 045267 365 LCHCGWNSVLESVVNGVPLIAWPLYAEQKMNAVILT-EDVKLALRPKANENGIVGRDEIAKVVKALMEGEQGKEVRNKMK 443 (482)
Q Consensus 365 I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~-~~~G~G~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~ 443 (482)
|||||+||++||+++|||||++|++.||+.||++++ + +|+|+.++ .+ ++++.|+++|+++|.|+.+++||+||+
T Consensus 376 vth~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~-~G~g~~l~-~~---~~~~~l~~~i~~ll~~~~~~~~r~~a~ 450 (482)
T 2pq6_A 376 LTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNE-WEIGMEID-TN---VKREELAKLINEVIAGDKGKKMKQKAM 450 (482)
T ss_dssp EECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHT-SCCEEECC-SS---CCHHHHHHHHHHHHTSHHHHHHHHHHH
T ss_pred EecCCcchHHHHHHcCCCEEecCcccchHHHHHHHHHH-hCEEEEEC-CC---CCHHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 999999999999999999999999999999999997 7 99999998 56 999999999999999875667999999
Q ss_pred HHHHHHHHHhhcCCchHHHHHHHHHHHhhc
Q 045267 444 DLKDAAAAVLSENGSSTKALSQLASKWNNN 473 (482)
Q Consensus 444 ~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~ 473 (482)
++++++++++.+|||+.+++++|+++++++
T Consensus 451 ~l~~~~~~a~~~gGss~~~l~~~v~~~~~~ 480 (482)
T 2pq6_A 451 ELKKKAEENTRPGGCSYMNLNKVIKDVLLK 480 (482)
T ss_dssp HHHHHHHHHTSTTCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHhc
Confidence 999999999999999999999999988543
No 5
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=1.2e-57 Score=466.32 Aligned_cols=433 Identities=27% Similarity=0.447 Sum_probs=315.6
Q ss_pred cCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCE--EEEEcCCCCCCchhhhhhhhc-C---CCceeEEEecCCCC-CCCc
Q 045267 9 AAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFL--VTFFIPSDGPPSEAQKSTLES-L---PSSINSVFLPVSLN-DVAE 81 (482)
Q Consensus 9 ~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~--Vt~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~l~~~~~-~~~~ 81 (482)
.++||+++|+|+.||++|++.||+.|++| ||+ |||++++.+ ...+... . ..++++..++.... +...
T Consensus 6 ~~~hvv~~p~p~~GHi~P~l~la~~L~~r-Gh~v~vt~~~t~~~-----~~~~~~~~~~~~~~~i~~~~i~~glp~~~~~ 79 (456)
T 2c1x_A 6 TNPHVAVLAFPFSTHAAPLLAVVRRLAAA-APHAVFSFFSTSQS-----NASIFHDSMHTMQCNIKSYDISDGVPEGYVF 79 (456)
T ss_dssp -CCEEEEECCCSSSSHHHHHHHHHHHHHH-CTTSEEEEEECHHH-----HHHHC-------CTTEEEEECCCCCCTTCCC
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhC-CCCeEEEEEeCchh-----HHHhhccccccCCCceEEEeCCCCCCCcccc
Confidence 35799999999999999999999999988 755 577776521 1111111 1 24688888862111 1000
Q ss_pred chhhHHHHHHHHHhhhHHHHHHHHHHhh--CCCccEEEeCCCCccHHHHHHHcCCccEEEccchHHHHHHHhhhhhhhcc
Q 045267 82 DARAETVISLTVLRSLPCLRQELTSLVA--KATVAALVVDLFGTDAFDVAQEFNISPYIFYPSTAMCLSLFLHLEKLDQM 159 (482)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~pD~vi~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~ 159 (482)
.......+..+.......+++.++++.+ ..+||+||+|.+..|+..+|+++|||++.++++++.....+.+.+.....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 159 (456)
T 2c1x_A 80 AGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREK 159 (456)
T ss_dssp CCCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHH
T ss_pred cCChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhc
Confidence 0011122222222223445555655443 36899999999999999999999999999999987766655444432211
Q ss_pred CCCCCcccCCCCcc-cCCCCCccccCCCCccccc-ccchHHHHHH-HHHhhcccccEEEEcCccccchhHHHHhhhcCCC
Q 045267 160 VPRDCEYRDMSEPV-QIPGCIPVHGGYLLDPVQD-RKNEAYRWVL-HHAKRYKLAEGIIVNSFTDLEGGALKALQHQDEP 236 (482)
Q Consensus 160 ~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~p 236 (482)
.............+ .+|++.++...+++..+.. .....+..+. +.....+.++.+++|+++++|.++...+.+.
T Consensus 160 ~~~~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~--- 236 (456)
T 2c1x_A 160 IGVSGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSK--- 236 (456)
T ss_dssp HCSSCCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHH---
T ss_pred cCCcccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhc---
Confidence 11000001111122 2577766555666654321 1111222222 2234456778899999999999877777653
Q ss_pred CCCCeEeeccCcCCCCCC-ccccccccccccCCCCCcEEEEeccCCCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCCCC
Q 045267 237 GKPPVYPVGPLVKTGSTA-ESKNEGCLKWLDDQPLGSVLFVSFGSGGTLSCEQLNELALGLEMSEQRFLWVVRSPNNAAN 315 (482)
Q Consensus 237 ~~p~~~~vGp~~~~~~~~-~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~ 315 (482)
.|++++|||++...... .+.+.++.+|++.++++++|||||||+...+.+.+.+++.+|+..+.+|+|+++...
T Consensus 237 -~~~~~~vGpl~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~---- 311 (456)
T 2c1x_A 237 -LKTYLNIGPFNLITPPPVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKA---- 311 (456)
T ss_dssp -SSCEEECCCHHHHC---------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGG----
T ss_pred -CCCEEEecCcccCcccccccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCcc----
Confidence 36899999997643221 222456889999988889999999999888888899999999999999999997632
Q ss_pred CcccccCCCCCCCCCCchhHHhhhcCCCeeeccccchhhhhhcccccccccccCchhHHHHhhcCCcEeeccccccchhh
Q 045267 316 STFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWAPQAQVLSHGSTGGFLCHCGWNSVLESVVNGVPLIAWPLYAEQKMN 395 (482)
Q Consensus 316 ~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ipq~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~n 395 (482)
...+|+++.++. +.|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.|
T Consensus 312 ------------~~~l~~~~~~~~-~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~N 378 (456)
T 2c1x_A 312 ------------RVHLPEGFLEKT-RGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLN 378 (456)
T ss_dssp ------------GGGSCTTHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHH
T ss_pred ------------hhhCCHHHHhhc-CCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHH
Confidence 234788887665 4578888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhc-ceeeeeccCCCCccCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHhh
Q 045267 396 AVILTEDV-KLALRPKANENGIVGRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQLASKWNN 472 (482)
Q Consensus 396 a~rv~~~~-G~G~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~ 472 (482)
|+++++ . |+|+.++..+ ++++.|+++|+++|.|+++++||+||+++++.++++..+|||+.+++++|++.+++
T Consensus 379 a~~l~~-~~g~g~~l~~~~---~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 379 GRMVED-VLEIGVRIEGGV---FTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSK 452 (456)
T ss_dssp HHHHHH-TSCCEEECGGGS---CCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTS
T ss_pred HHHHHH-HhCeEEEecCCC---cCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHh
Confidence 999999 7 9999998777 99999999999999987666899999999999999999999999999999998854
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.5e-43 Score=360.42 Aligned_cols=401 Identities=18% Similarity=0.190 Sum_probs=264.7
Q ss_pred hhhhccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEecCCCC-CC-C-
Q 045267 4 TLQAQAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLPVSLN-DV-A- 80 (482)
Q Consensus 4 ~~~~~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~-~- 80 (482)
+...|.+|||+|+++++.||++|++.||++|+++ ||+|+|++++.+.+ ... ..|++|..++.... +. .
T Consensus 6 ~~~~m~~~~Il~~~~~~~GHv~p~l~la~~L~~~-Gh~V~~~~~~~~~~------~~~--~~g~~~~~~~~~~~~~~~~~ 76 (424)
T 2iya_A 6 RSASVTPRHISFFNIPGHGHVNPSLGIVQELVAR-GHRVSYAITDEFAA------QVK--AAGATPVVYDSILPKESNPE 76 (424)
T ss_dssp -----CCCEEEEECCSCHHHHHHHHHHHHHHHHT-TCEEEEEECGGGHH------HHH--HHTCEEEECCCCSCCTTCTT
T ss_pred ccCCcccceEEEEeCCCCcccchHHHHHHHHHHC-CCeEEEEeCHHHHH------HHH--hCCCEEEecCccccccccch
Confidence 3456888899999999999999999999999988 99999999875322 222 12678877762211 11 0
Q ss_pred c--chhhHHHHHHHHHhhhHHHHHHHHHHhhCCCccEEEeCCCCccHHHHHHHcCCccEEEccchHHHHHHHhhhhhh-h
Q 045267 81 E--DARAETVISLTVLRSLPCLRQELTSLVAKATVAALVVDLFGTDAFDVAQEFNISPYIFYPSTAMCLSLFLHLEKL-D 157 (482)
Q Consensus 81 ~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~pD~vi~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~-~ 157 (482)
. .......+ ..+........+.+.+++++.+||+||+|.+.+|+..+|+++|||++.+++.+...... ...+.. .
T Consensus 77 ~~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~-~~~~~~~~ 154 (424)
T 2iya_A 77 ESWPEDQESAM-GLFLDEAVRVLPQLEDAYADDRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGF-EEDVPAVQ 154 (424)
T ss_dssp CCCCSSHHHHH-HHHHHHHHHHHHHHHHHTTTSCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTH-HHHSGGGS
T ss_pred hhcchhHHHHH-HHHHHHHHHHHHHHHHHHhccCCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccccc-cccccccc
Confidence 0 00111111 22222233444556666777899999999988889999999999999998765421110 000000 0
Q ss_pred ccCCCCCcccCCCCcccCCCCCccccCCCCc--ccccccchHHHHHHHHH-------hhcccccEEEEcCccccchhHHH
Q 045267 158 QMVPRDCEYRDMSEPVQIPGCIPVHGGYLLD--PVQDRKNEAYRWVLHHA-------KRYKLAEGIIVNSFTDLEGGALK 228 (482)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~s~~~l~~~~~~ 228 (482)
.... +.......|...... ..+.. .........+..+++.. ......+..+.++...++.+.
T Consensus 155 ~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~-- 225 (424)
T 2iya_A 155 DPTA------DRGEEAAAPAGTGDA-EEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKG-- 225 (424)
T ss_dssp CCCC----------------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTG--
T ss_pred cccc------ccccccccccccccc-hhhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCCc--
Confidence 0000 000000000000000 00000 00000001111121111 011134567788888777641
Q ss_pred HhhhcCCCCCCCeEeeccCcCCCCCCccccccccccccCCCCCcEEEEeccCCCCCCHHHHHHHHHHHHhcCCceEEEEe
Q 045267 229 ALQHQDEPGKPPVYPVGPLVKTGSTAESKNEGCLKWLDDQPLGSVLFVSFGSGGTLSCEQLNELALGLEMSEQRFLWVVR 308 (482)
Q Consensus 229 ~~~~~~~p~~p~~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~ 308 (482)
.+..++++++||+..... ...+|++..+++++|||++||......+.+..++++++..+.+++|+++
T Consensus 226 ------~~~~~~~~~vGp~~~~~~-------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g 292 (424)
T 2iya_A 226 ------DTVGDNYTFVGPTYGDRS-------HQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVG 292 (424)
T ss_dssp ------GGCCTTEEECCCCCCCCG-------GGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECC
T ss_pred ------cCCCCCEEEeCCCCCCcc-------cCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEEC
Confidence 113358999999764311 1246777666678999999999866678888999999888889989887
Q ss_pred CCCCCCCCcccccCCCCCCCCCCchhHHhhhcCCCeeeccccchhhhhhcccccccccccCchhHHHHhhcCCcEeeccc
Q 045267 309 SPNNAANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWAPQAQVLSHGSTGGFLCHCGWNSVLESVVNGVPLIAWPL 388 (482)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ipq~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~ 388 (482)
.+... +....+ +.|+.+.+|+||.++|++++ +||||||+||++||+++|+|+|++|.
T Consensus 293 ~~~~~------------~~~~~~---------~~~v~~~~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~i~~p~ 349 (424)
T 2iya_A 293 RFVDP------------ADLGEV---------PPNVEVHQWVPQLDILTKAS--AFITHAGMGSTMEALSNAVPMVAVPQ 349 (424)
T ss_dssp TTSCG------------GGGCSC---------CTTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHTTCCEEECCC
T ss_pred CcCCh------------HHhccC---------CCCeEEecCCCHHHHHhhCC--EEEECCchhHHHHHHHcCCCEEEecC
Confidence 53210 001112 35899999999999999999 99999999999999999999999999
Q ss_pred cccchhhHHHHHhhcceeeeeccCCCCccCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHH
Q 045267 389 YAEQKMNAVILTEDVKLALRPKANENGIVGRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQLAS 468 (482)
Q Consensus 389 ~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~ 468 (482)
..||+.||+++++ .|+|+.++.++ +++++|+++|+++|+|+ +++++++++++++++ .++..++++.+.+
T Consensus 350 ~~dQ~~na~~l~~-~g~g~~~~~~~---~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~i~~ 418 (424)
T 2iya_A 350 IAEQTMNAERIVE-LGLGRHIPRDQ---VTAEKLREAVLAVASDP---GVAERLAAVRQEIRE----AGGARAAADILEG 418 (424)
T ss_dssp SHHHHHHHHHHHH-TTSEEECCGGG---CCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT----SCHHHHHHHHHHH
T ss_pred ccchHHHHHHHHH-CCCEEEcCcCC---CCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh----cCcHHHHHHHHHH
Confidence 9999999999999 99999998777 99999999999999987 899999999999985 4667777777766
Q ss_pred HHh
Q 045267 469 KWN 471 (482)
Q Consensus 469 ~~~ 471 (482)
.+.
T Consensus 419 ~~~ 421 (424)
T 2iya_A 419 ILA 421 (424)
T ss_dssp HHH
T ss_pred HHh
Confidence 554
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=2.1e-44 Score=363.57 Aligned_cols=359 Identities=15% Similarity=0.174 Sum_probs=228.0
Q ss_pred cCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEecCCCC-------CCCc
Q 045267 9 AAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLPVSLN-------DVAE 81 (482)
Q Consensus 9 ~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~ 81 (482)
+.|||+|+++|+.||++|+++||++|++| ||+|||++++.+.+ .. ..++.+..+....+ ....
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~r-Gh~Vt~~t~~~~~~------~~---~~g~~~~~~~~~~~~~~~~~~~~~~ 90 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRAL-GHEVRYATGGDIRA------VA---EAGLCAVDVSPGVNYAKLFVPDDTD 90 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEECSSTHH------HH---TTTCEEEESSTTCCSHHHHSCCC--
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHC-CCEEEEEeCcchhh------HH---hcCCeeEecCCchhHhhhccccccc
Confidence 35899999999999999999999999998 99999999875322 11 22455555431110 0000
Q ss_pred c-------hhhHHHHHHHHHhhhHHHHHHHHHHhhCCCccEEEeCCCCccHHHHHHHcCCccEEEccchHHHHHHHhhhh
Q 045267 82 D-------ARAETVISLTVLRSLPCLRQELTSLVAKATVAALVVDLFGTDAFDVAQEFNISPYIFYPSTAMCLSLFLHLE 154 (482)
Q Consensus 82 ~-------~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~pD~vi~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~ 154 (482)
. ......+...+..........+.+.+++++||+||+|.+.+++..+|+.+|||++.+...+........
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~--- 167 (400)
T 4amg_A 91 VTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARSWRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLG--- 167 (400)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHH---
T ss_pred cccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECcchHHHHHHHHHcCCCceeecccccccccchh---
Confidence 0 000111111222222222233334445669999999999999999999999998876543322100000
Q ss_pred hhhccCCCCCcccCCCCcccCCCCCccccCCCCcccccccchHHHHHHHHHhhc-ccccEEEEcCccccchhHHHHhhhc
Q 045267 155 KLDQMVPRDCEYRDMSEPVQIPGCIPVHGGYLLDPVQDRKNEAYRWVLHHAKRY-KLAEGIIVNSFTDLEGGALKALQHQ 233 (482)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~l~~~~~~~~~~~ 233 (482)
......+.....+.... ........... ........+.
T Consensus 168 -------------------------------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 206 (400)
T 4amg_A 168 -------------------------------------ALIRRAMSKDYERHGVTGEPTGSVRLTTT----PPSVEALLPE 206 (400)
T ss_dssp -------------------------------------HHHHHHTHHHHHHTTCCCCCSCEEEEECC----CHHHHHTSCG
T ss_pred -------------------------------------hHHHHHHHHHHHHhCCCcccccchhhccc----CchhhccCcc
Confidence 00000011111111100 01111111111 0111111110
Q ss_pred CCCCCCCeEeeccCcCCCCCCccccccccccccCCCCCcEEEEeccCCCCCC--HHHHHHHHHHHHhcCCceEEEEeCCC
Q 045267 234 DEPGKPPVYPVGPLVKTGSTAESKNEGCLKWLDDQPLGSVLFVSFGSGGTLS--CEQLNELALGLEMSEQRFLWVVRSPN 311 (482)
Q Consensus 234 ~~p~~p~~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~--~~~~~~~~~al~~~~~~~i~~~~~~~ 311 (482)
.. ..+......+... ..+..+.+|++..+++++|||||||+...+ .+.+..++++++..+.+++|..++..
T Consensus 207 ~~-~~~~~~~~~~~~~------~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~ 279 (400)
T 4amg_A 207 DR-RSPGAWPMRYVPY------NGGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGD 279 (400)
T ss_dssp GG-CCTTCEECCCCCC------CCCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTC
T ss_pred cc-cCCcccCcccccc------cccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCcc
Confidence 00 1122333332221 123444568888888999999999985543 45688899999999999999987653
Q ss_pred CCCCCcccccCCCCCCCCCCchhHHhhhcCCCeeeccccchhhhhhcccccccccccCchhHHHHhhcCCcEeecccccc
Q 045267 312 NAANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWAPQAQVLSHGSTGGFLCHCGWNSVLESVVNGVPLIAWPLYAE 391 (482)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ipq~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~D 391 (482)
. .....+|+ |+++.+|+||.++|++++ +||||||+||++||+++|||+|++|+++|
T Consensus 280 ~-------------~~~~~~~~---------~v~~~~~~p~~~lL~~~~--~~v~h~G~~s~~Eal~~GvP~v~~P~~~d 335 (400)
T 4amg_A 280 L-------------ALLGELPA---------NVRVVEWIPLGALLETCD--AIIHHGGSGTLLTALAAGVPQCVIPHGSY 335 (400)
T ss_dssp C-------------CCCCCCCT---------TEEEECCCCHHHHHTTCS--EEEECCCHHHHHHHHHHTCCEEECCC---
T ss_pred c-------------cccccCCC---------CEEEEeecCHHHHhhhhh--heeccCCccHHHHHHHhCCCEEEecCccc
Confidence 3 22334444 888999999999999999 99999999999999999999999999999
Q ss_pred chhhHHHHHhhcceeeeeccCCCCccCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHH
Q 045267 392 QKMNAVILTEDVKLALRPKANENGIVGRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQLA 467 (482)
Q Consensus 392 Q~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~ 467 (482)
|+.||+++++ .|+|+.++..+ ++++ +|+++|+|+ +||++|+++++++++ .. +..++++.|.
T Consensus 336 Q~~na~~v~~-~G~g~~l~~~~---~~~~----al~~lL~d~---~~r~~a~~l~~~~~~---~~-~~~~~a~~le 396 (400)
T 4amg_A 336 QDTNRDVLTG-LGIGFDAEAGS---LGAE----QCRRLLDDA---GLREAALRVRQEMSE---MP-PPAETAAXLV 396 (400)
T ss_dssp CHHHHHHHHH-HTSEEECCTTT---CSHH----HHHHHHHCH---HHHHHHHHHHHHHHT---SC-CHHHHHHHHH
T ss_pred HHHHHHHHHH-CCCEEEcCCCC---chHH----HHHHHHcCH---HHHHHHHHHHHHHHc---CC-CHHHHHHHHH
Confidence 9999999999 99999998877 7765 566788887 999999999999996 44 4445555553
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.2e-41 Score=345.27 Aligned_cols=372 Identities=14% Similarity=0.114 Sum_probs=248.3
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEecCCCCCC----CcchhhH
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLPVSLNDV----AEDARAE 86 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~~~~ 86 (482)
|||+|+++++.||++|+++||++|+++ ||+|+|++++.. ..... ..|+++..++...... .....
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~-Gh~V~~~~~~~~------~~~v~--~~g~~~~~i~~~~~~~~~~~~~~~~-- 69 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDL-GADVRMCAPPDC------AERLA--EVGVPHVPVGPSARAPIQRAKPLTA-- 69 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHT-TCEEEEEECGGG------HHHHH--HTTCCEEECCC-------CCSCCCH--
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHC-CCeEEEEcCHHH------HHHHH--HcCCeeeeCCCCHHHHhhcccccch--
Confidence 589999999999999999999999988 999999998852 22222 2368888887222111 11111
Q ss_pred HHHHHHHHhhhHHHHHHHHHHhh-CCCccEEEeCC-CCcc--HHHHHHHcCCccEEEccchHHHHHHHhhhhhhhccCCC
Q 045267 87 TVISLTVLRSLPCLRQELTSLVA-KATVAALVVDL-FGTD--AFDVAQEFNISPYIFYPSTAMCLSLFLHLEKLDQMVPR 162 (482)
Q Consensus 87 ~~~~~~~~~~~~~l~~~l~~~~~-~~~pD~vi~D~-~~~~--~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (482)
..+..... ..+.+.++++.+ ..+||+||+|. +.++ +..+|+++|||++.+++++...... ..+
T Consensus 70 ~~~~~~~~---~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~---------~~p- 136 (415)
T 1iir_A 70 EDVRRFTT---EAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPSP---------YYP- 136 (415)
T ss_dssp HHHHHHHH---HHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCCS---------SSC-
T ss_pred HHHHHHHH---HHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCCc---------ccC-
Confidence 11111111 112333444432 56999999998 6677 7889999999999988775442000 000
Q ss_pred CCcccCCCCcccCCCC-CccccCCCCcccc----cc-----cchHHHHHHHHHhhccc---------ccEEEEcCccccc
Q 045267 163 DCEYRDMSEPVQIPGC-IPVHGGYLLDPVQ----DR-----KNEAYRWVLHHAKRYKL---------AEGIIVNSFTDLE 223 (482)
Q Consensus 163 ~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~----~~-----~~~~~~~~~~~~~~~~~---------~~~~~~~s~~~l~ 223 (482)
.+.. .+.+.......+. +. ....++.+.+.+ .+.. ....+.++.+.++
T Consensus 137 ------------~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~l~~~~~~l~ 203 (415)
T 1iir_A 137 ------------PPPLGEPSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAI-GLPPVEDIFTFGYTDHPWVAADPVLA 203 (415)
T ss_dssp ------------CCC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCCCCHHHHHHCSSCEECSCTTTS
T ss_pred ------------CccCCccccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHc-CCCCCCccccccCCCCEEEeeChhhc
Confidence 0000 0000000000000 00 000001111110 0000 0134566666665
Q ss_pred h-hHHHHhhhcCCCCCCCeEeeccCcCCCCCCccccccccccccCCCCCcEEEEeccCCCCCCHHHHHHHHHHHHhcCCc
Q 045267 224 G-GALKALQHQDEPGKPPVYPVGPLVKTGSTAESKNEGCLKWLDDQPLGSVLFVSFGSGGTLSCEQLNELALGLEMSEQR 302 (482)
Q Consensus 224 ~-~~~~~~~~~~~p~~p~~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~ 302 (482)
+ + ++.. +++++||+...+. ...+.++.+|++.++ ++|||++||+. ...+....++++++..+.+
T Consensus 204 ~~~---------~~~~-~~~~vG~~~~~~~--~~~~~~~~~~l~~~~--~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~ 268 (415)
T 1iir_A 204 PLQ---------PTDL-DAVQTGAWILPDE--RPLSPELAAFLDAGP--PPVYLGFGSLG-APADAVRVAIDAIRAHGRR 268 (415)
T ss_dssp CCC---------CCSS-CCEECCCCCCCCC--CCCCHHHHHHHHTSS--CCEEEECC----CCHHHHHHHHHHHHHTTCC
T ss_pred CCC---------cccC-CeEeeCCCccCcc--cCCCHHHHHHHhhCC--CeEEEeCCCCC-CcHHHHHHHHHHHHHCCCe
Confidence 4 2 2233 8999999987543 345678889997653 59999999987 5677788899999999999
Q ss_pred eEEEEeCCCCCCCCcccccCCCCCCCCCCchhHHhhhcCCCeeeccccchhhhhhcccccccccccCchhHHHHhhcCCc
Q 045267 303 FLWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWAPQAQVLSHGSTGGFLCHCGWNSVLESVVNGVP 382 (482)
Q Consensus 303 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ipq~~lL~~~~~~~~I~HGG~gs~~eal~~GvP 382 (482)
++|+++.... . ...+| +|+++.+|+||.++|+.++ +||||||+||++||+++|+|
T Consensus 269 ~v~~~g~~~~-------------~-~~~~~---------~~v~~~~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P 323 (415)
T 1iir_A 269 VILSRGWADL-------------V-LPDDG---------ADCFAIGEVNHQVLFGRVA--AVIHHGGAGTTHVAARAGAP 323 (415)
T ss_dssp EEECTTCTTC-------------C-CSSCG---------GGEEECSSCCHHHHGGGSS--EEEECCCHHHHHHHHHHTCC
T ss_pred EEEEeCCCcc-------------c-ccCCC---------CCEEEeCcCChHHHHhhCC--EEEeCCChhHHHHHHHcCCC
Confidence 9998875421 1 11223 3888999999999999998 99999999999999999999
Q ss_pred EeeccccccchhhHHHHHhhcceeeeeccCCCCccCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcCCchHHH
Q 045267 383 LIAWPLYAEQKMNAVILTEDVKLALRPKANENGIVGRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTKA 462 (482)
Q Consensus 383 ~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~ 462 (482)
+|++|...||+.||+++++ .|+|+.++.++ +++++|+++|+++ .|+ ++++++++++++++. .++..++
T Consensus 324 ~i~~p~~~dQ~~na~~l~~-~g~g~~~~~~~---~~~~~l~~~i~~l-~~~---~~~~~~~~~~~~~~~----~~~~~~~ 391 (415)
T 1iir_A 324 QILLPQMADQPYYAGRVAE-LGVGVAHDGPI---PTFDSLSAALATA-LTP---ETHARATAVAGTIRT----DGAAVAA 391 (415)
T ss_dssp EEECCCSTTHHHHHHHHHH-HTSEEECSSSS---CCHHHHHHHHHHH-TSH---HHHHHHHHHHHHSCS----CHHHHHH
T ss_pred EEECCCCCccHHHHHHHHH-CCCcccCCcCC---CCHHHHHHHHHHH-cCH---HHHHHHHHHHHHHhh----cChHHHH
Confidence 9999999999999999999 99999998877 9999999999999 886 899999999998863 4555566
Q ss_pred HHHHHHHHh
Q 045267 463 LSQLASKWN 471 (482)
Q Consensus 463 ~~~~~~~~~ 471 (482)
++.+.+.++
T Consensus 392 ~~~i~~~~~ 400 (415)
T 1iir_A 392 RLLLDAVSR 400 (415)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 665554443
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=7.9e-41 Score=339.41 Aligned_cols=373 Identities=10% Similarity=0.055 Sum_probs=249.9
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEecCCCCCCC----cchhhH
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLPVSLNDVA----EDARAE 86 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~ 86 (482)
|||+|+++++.||++|+++||++|+++ ||+|+|++++.. ..... ..|+++..++....+.. .+.. .
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~-Gh~V~~~~~~~~------~~~v~--~~g~~~~~~~~~~~~~~~~~~~~~~-~ 70 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKAL-GVQTRMCAPPAA------EERLA--EVGVPHVPVGLPQHMMLQEGMPPPP-P 70 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHT-TCEEEEEECGGG------HHHHH--HHTCCEEECSCCGGGCCCTTSCCCC-H
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHC-CCeEEEEeCHHH------HHHHH--HcCCeeeecCCCHHHHHhhccccch-h
Confidence 589999999999999999999999988 999999998742 22222 22688888773221111 1110 1
Q ss_pred HHHHHHHHhhhHHHHHHHHHHhhCCCccEEEeCC-CCcc--HHHHHHHcCCccEEEccchHHHHHHHhhhhhhhccCCCC
Q 045267 87 TVISLTVLRSLPCLRQELTSLVAKATVAALVVDL-FGTD--AFDVAQEFNISPYIFYPSTAMCLSLFLHLEKLDQMVPRD 163 (482)
Q Consensus 87 ~~~~~~~~~~~~~l~~~l~~~~~~~~pD~vi~D~-~~~~--~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (482)
..+...+......+.+.+.+. ..+||+||+|. ..++ +..+|+.+|||++.+.+++......
T Consensus 71 ~~~~~~~~~~~~~~~~~l~~~--~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~~-------------- 134 (416)
T 1rrv_A 71 EEEQRLAAMTVEMQFDAVPGA--AEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLASP-------------- 134 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--TTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCCS--------------
T ss_pred HHHHHHHHHHHHHHHHHHHHH--hcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCCc--------------
Confidence 112222211112222222221 56899999997 4556 7789999999999887765332000
Q ss_pred CcccCCCCcccCC-CC-CccccCCCCcccccc-c--------chHHHHHHHHHh---------hcccccEEEEcCccccc
Q 045267 164 CEYRDMSEPVQIP-GC-IPVHGGYLLDPVQDR-K--------NEAYRWVLHHAK---------RYKLAEGIIVNSFTDLE 223 (482)
Q Consensus 164 ~~~~~~~~~~~~p-~~-~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~---------~~~~~~~~~~~s~~~l~ 223 (482)
. +| .. .+.........+... . ...++.+.+.+. ..... .++.++.+.++
T Consensus 135 --------~--~p~~~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~ 203 (416)
T 1rrv_A 135 --------H--LPPAYDEPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLA 203 (416)
T ss_dssp --------S--SCCCBCSCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTS
T ss_pred --------c--cCCCCCCCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCcccc
Confidence 0 01 00 000000000000000 0 000111111110 00111 35666666665
Q ss_pred hhHHHHhhhcCCCCCCCeEeeccCcCCCCCCccccccccccccCCCCCcEEEEeccCCCC-CCHHHHHHHHHHHHhcCCc
Q 045267 224 GGALKALQHQDEPGKPPVYPVGPLVKTGSTAESKNEGCLKWLDDQPLGSVLFVSFGSGGT-LSCEQLNELALGLEMSEQR 302 (482)
Q Consensus 224 ~~~~~~~~~~~~p~~p~~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~-~~~~~~~~~~~al~~~~~~ 302 (482)
++ ++.. +++++||+..... ...+.++.+|++.++ ++|||++||+.. ...+.+..++++++..+.+
T Consensus 204 ~~---------~~~~-~~~~vG~~~~~~~--~~~~~~~~~~l~~~~--~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~ 269 (416)
T 1rrv_A 204 PL---------QPDV-DAVQTGAWLLSDE--RPLPPELEAFLAAGS--PPVHIGFGSSSGRGIADAAKVAVEAIRAQGRR 269 (416)
T ss_dssp CC---------CSSC-CCEECCCCCCCCC--CCCCHHHHHHHHSSS--CCEEECCTTCCSHHHHHHHHHHHHHHHHTTCC
T ss_pred CC---------CCCC-CeeeECCCccCcc--CCCCHHHHHHHhcCC--CeEEEecCCCCccChHHHHHHHHHHHHHCCCe
Confidence 43 2233 7999999987643 345677889987653 699999999854 3456688899999999999
Q ss_pred eEEEEeCCCCCCCCcccccCCCCCCCCCCchhHHhhhcCCCeeeccccchhhhhhcccccccccccCchhHHHHhhcCCc
Q 045267 303 FLWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWAPQAQVLSHGSTGGFLCHCGWNSVLESVVNGVP 382 (482)
Q Consensus 303 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ipq~~lL~~~~~~~~I~HGG~gs~~eal~~GvP 382 (482)
++|+++.... . ...+ ++|+.+.+|+||.++|++++ +||||||+||++||+++|+|
T Consensus 270 ~v~~~g~~~~-------------~-~~~~---------~~~v~~~~~~~~~~ll~~~d--~~v~~~G~~t~~Ea~~~G~P 324 (416)
T 1rrv_A 270 VILSRGWTEL-------------V-LPDD---------RDDCFAIDEVNFQALFRRVA--AVIHHGSAGTEHVATRAGVP 324 (416)
T ss_dssp EEEECTTTTC-------------C-CSCC---------CTTEEEESSCCHHHHGGGSS--EEEECCCHHHHHHHHHHTCC
T ss_pred EEEEeCCccc-------------c-ccCC---------CCCEEEeccCChHHHhccCC--EEEecCChhHHHHHHHcCCC
Confidence 9999876421 1 1122 34888999999999999999 99999999999999999999
Q ss_pred EeeccccccchhhHHHHHhhcceeeeeccCCCCccCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcCCchHHH
Q 045267 383 LIAWPLYAEQKMNAVILTEDVKLALRPKANENGIVGRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTKA 462 (482)
Q Consensus 383 ~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~ 462 (482)
+|++|...||+.||+++++ .|+|+.++.++ ++++.|+++|+++ .|+ +++++++++++++++ .++. ++
T Consensus 325 ~i~~p~~~dQ~~na~~l~~-~g~g~~~~~~~---~~~~~l~~~i~~l-~~~---~~~~~~~~~~~~~~~----~~~~-~~ 391 (416)
T 1rrv_A 325 QLVIPRNTDQPYFAGRVAA-LGIGVAHDGPT---PTFESLSAALTTV-LAP---ETRARAEAVAGMVLT----DGAA-AA 391 (416)
T ss_dssp EEECCCSBTHHHHHHHHHH-HTSEEECSSSC---CCHHHHHHHHHHH-TSH---HHHHHHHHHTTTCCC----CHHH-HH
T ss_pred EEEccCCCCcHHHHHHHHH-CCCccCCCCCC---CCHHHHHHHHHHh-hCH---HHHHHHHHHHHHHhh----cCcH-HH
Confidence 9999999999999999999 99999998877 9999999999999 886 899999999988874 4455 77
Q ss_pred HHHHHHHHhh
Q 045267 463 LSQLASKWNN 472 (482)
Q Consensus 463 ~~~~~~~~~~ 472 (482)
++.+++++..
T Consensus 392 ~~~i~e~~~~ 401 (416)
T 1rrv_A 392 ADLVLAAVGR 401 (416)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhc
Confidence 7776344433
No 10
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=2.4e-40 Score=334.41 Aligned_cols=368 Identities=13% Similarity=0.088 Sum_probs=248.9
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEecCCCCCC-----Ccchhh
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLPVSLNDV-----AEDARA 85 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~ 85 (482)
|||+|++.++.||++|+++||++|+++ ||+|+|++++. ...... ..|+.+..++...... ......
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~-Gh~V~v~~~~~------~~~~v~--~~g~~~~~l~~~~~~~~~~~~~~~~~~ 71 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLREL-GADARMCLPPD------YVERCA--EVGVPMVPVGRAVRAGAREPGELPPGA 71 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHT-TCCEEEEECGG------GHHHHH--HTTCCEEECSSCSSGGGSCTTCCCTTC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHC-CCeEEEEeCHH------HHHHHH--HcCCceeecCCCHHHHhccccCCHHHH
Confidence 579999999999999999999999988 99999999873 333333 2368888887322211 000111
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHhhCCCccEEEeCCCCccH---HHHHHHcCCccEEEccchHHHHHHHhhhhhhhccCCC
Q 045267 86 ETVISLTVLRSLPCLRQELTSLVAKATVAALVVDLFGTDA---FDVAQEFNISPYIFYPSTAMCLSLFLHLEKLDQMVPR 162 (482)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~~~~~~pD~vi~D~~~~~~---~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (482)
...+.... ....+.+.++. .+||+||+|.....+ ..+|+.+|||++.+..++....+
T Consensus 72 ~~~~~~~~----~~~~~~l~~~~--~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~-------------- 131 (404)
T 3h4t_A 72 AEVVTEVV----AEWFDKVPAAI--EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPS-------------- 131 (404)
T ss_dssp GGGHHHHH----HHHHHHHHHHH--TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGG--------------
T ss_pred HHHHHHHH----HHHHHHHHHHh--cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCC--------------
Confidence 11121111 22222222222 379999998765544 67999999999988776543100
Q ss_pred CCcccCCCCcccCCCCCccccCCCCcccccccchHHHHHHHHHhhccc---------ccEEEEcCccccchhHHHHhhhc
Q 045267 163 DCEYRDMSEPVQIPGCIPVHGGYLLDPVQDRKNEAYRWVLHHAKRYKL---------AEGIIVNSFTDLEGGALKALQHQ 233 (482)
Q Consensus 163 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~s~~~l~~~~~~~~~~~ 233 (482)
+.+ ...+.......+......++....... +.. ....+.+..+.+.+.
T Consensus 132 -------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lg-l~~~~~~~~~~~~~~~l~~~~~~l~p~-------- 188 (404)
T 3h4t_A 132 -------------EQS-QAERDMYNQGADRLFGDAVNSHRASIG-LPPVEHLYDYGYTDQPWLAADPVLSPL-------- 188 (404)
T ss_dssp -------------GSC-HHHHHHHHHHHHHHHHHHHHHHHHHTT-CCCCCCHHHHHHCSSCEECSCTTTSCC--------
T ss_pred -------------hhH-HHHHHHHHHHHHHHhHHHHHHHHHHcC-CCCCcchhhccccCCeEEeeCcceeCC--------
Confidence 000 000000000000000000111111100 000 011122322222221
Q ss_pred CCCCCCCeEeeccCcCCCCCCccccccccccccCCCCCcEEEEeccCCCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCC
Q 045267 234 DEPGKPPVYPVGPLVKTGSTAESKNEGCLKWLDDQPLGSVLFVSFGSGGTLSCEQLNELALGLEMSEQRFLWVVRSPNNA 313 (482)
Q Consensus 234 ~~p~~p~~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~ 313 (482)
++..++++++|+++.+.. ...++++.+|++.. +++|||++||+.. ..+.+..++++++..+.+++|+.++...
T Consensus 189 -~~~~~~~~~~G~~~~~~~--~~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~~- 261 (404)
T 3h4t_A 189 -RPTDLGTVQTGAWILPDQ--RPLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWAGL- 261 (404)
T ss_dssp -CTTCCSCCBCCCCCCCCC--CCCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTTTC-
T ss_pred -CCCCCCeEEeCccccCCC--CCCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCccc-
Confidence 233458899998876543 45678888898754 4699999999876 6778889999999999999999876422
Q ss_pred CCCcccccCCCCCCCCCCchhHHhhhcCCCeeeccccchhhhhhcccccccccccCchhHHHHhhcCCcEeeccccccch
Q 045267 314 ANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWAPQAQVLSHGSTGGFLCHCGWNSVLESVVNGVPLIAWPLYAEQK 393 (482)
Q Consensus 314 ~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ipq~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~ 393 (482)
.. .. .++|+++.+|+||.++|++++ +||||||+||+.||+++|+|+|++|+.+||+
T Consensus 262 ------------~~-~~---------~~~~v~~~~~~~~~~ll~~~d--~~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~ 317 (404)
T 3h4t_A 262 ------------GR-ID---------EGDDCLVVGEVNHQVLFGRVA--AVVHHGGAGTTTAVTRAGAPQVVVPQKADQP 317 (404)
T ss_dssp ------------CC-SS---------CCTTEEEESSCCHHHHGGGSS--EEEECCCHHHHHHHHHHTCCEEECCCSTTHH
T ss_pred ------------cc-cc---------CCCCEEEecCCCHHHHHhhCc--EEEECCcHHHHHHHHHcCCCEEEcCCcccHH
Confidence 00 11 135899999999999999999 9999999999999999999999999999999
Q ss_pred hhHHHHHhhcceeeeeccCCCCccCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHhhc
Q 045267 394 MNAVILTEDVKLALRPKANENGIVGRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQLASKWNNN 473 (482)
Q Consensus 394 ~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~ 473 (482)
.||+++++ .|+|..++..+ ++++.|.++|+++++ + +|+++++++++.+. . .+..++++.+.+.++..
T Consensus 318 ~na~~~~~-~G~g~~l~~~~---~~~~~l~~ai~~ll~-~---~~~~~~~~~~~~~~----~-~~~~~~~~~i~~~~~~~ 384 (404)
T 3h4t_A 318 YYAGRVAD-LGVGVAHDGPT---PTVESLSAALATALT-P---GIRARAAAVAGTIR----T-DGTTVAAKLLLEAISRQ 384 (404)
T ss_dssp HHHHHHHH-HTSEEECSSSS---CCHHHHHHHHHHHTS-H---HHHHHHHHHHTTCC----C-CHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHH-CCCEeccCcCC---CCHHHHHHHHHHHhC-H---HHHHHHHHHHHHHh----h-hHHHHHHHHHHHHHhhC
Confidence 99999999 99999998887 899999999999998 7 89999999999887 4 67778888887777654
Q ss_pred c
Q 045267 474 E 474 (482)
Q Consensus 474 ~ 474 (482)
.
T Consensus 385 ~ 385 (404)
T 3h4t_A 385 R 385 (404)
T ss_dssp -
T ss_pred C
Confidence 4
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=4.3e-39 Score=326.43 Aligned_cols=381 Identities=12% Similarity=0.133 Sum_probs=257.1
Q ss_pred cCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEecCCCCCCCcch-----
Q 045267 9 AAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLPVSLNDVAEDA----- 83 (482)
Q Consensus 9 ~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----- 83 (482)
.+|||+|+++++.||++|+++||++|+++ ||+|+|++++.+ ..... ..|+.+..++..........
T Consensus 19 ~m~rIl~~~~~~~GHv~p~l~La~~L~~~-Gh~V~v~~~~~~------~~~~~--~~G~~~~~~~~~~~~~~~~~~~~~~ 89 (415)
T 3rsc_A 19 HMAHLLIVNVASHGLILPTLTVVTELVRR-GHRVSYVTAGGF------AEPVR--AAGATVVPYQSEIIDADAAEVFGSD 89 (415)
T ss_dssp CCCEEEEECCSCHHHHGGGHHHHHHHHHT-TCEEEEEECGGG------HHHHH--HTTCEEEECCCSTTTCCHHHHHHSS
T ss_pred cCCEEEEEeCCCccccccHHHHHHHHHHC-CCEEEEEeCHHH------HHHHH--hcCCEEEeccccccccccchhhccc
Confidence 45799999999999999999999999988 999999997642 22222 23688888873222211100
Q ss_pred hhHHHHHHHHHhhhHHHHHHHHHHhhCCCccEEEeC-CCCccHHHHHHHcCCccEEEccchHHHHHHHhhhhhhhccCCC
Q 045267 84 RAETVISLTVLRSLPCLRQELTSLVAKATVAALVVD-LFGTDAFDVAQEFNISPYIFYPSTAMCLSLFLHLEKLDQMVPR 162 (482)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~pD~vi~D-~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (482)
.....+...+..........+.+++++++||+||+| ...+++..+|+++|||++.+.+...... .+...+..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~-~~~~~~~~------ 162 (415)
T 3rsc_A 90 DLGVRPHLMYLRENVSVLRATAEALDGDVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNE-HYSFSQDM------ 162 (415)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCS-SCCHHHHH------
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccC-cccccccc------
Confidence 001111110111222333455666778899999999 7777888999999999998765432110 00000000
Q ss_pred CCcccCCCCcccCCCCCccccCCCCcccccccchHHHHHHHHHhh-------cc-cccEEEEcCccccchhHHHHhhhcC
Q 045267 163 DCEYRDMSEPVQIPGCIPVHGGYLLDPVQDRKNEAYRWVLHHAKR-------YK-LAEGIIVNSFTDLEGGALKALQHQD 234 (482)
Q Consensus 163 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~s~~~l~~~~~~~~~~~~ 234 (482)
.+.... .....+......+..+...... .. ..+..+......++.. .
T Consensus 163 ----------------~~~~~~-~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~--- 217 (415)
T 3rsc_A 163 ----------------VTLAGT-IDPLDLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIA-----G--- 217 (415)
T ss_dssp ----------------HHHHTC-CCGGGCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTT-----G---
T ss_pred ----------------cccccc-CChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCC-----c---
Confidence 000000 0000111111112222221110 00 1133444443333322 0
Q ss_pred CCCCCCeEeeccCcCCCCCCccccccccccccCCCCCcEEEEeccCCCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCCC
Q 045267 235 EPGKPPVYPVGPLVKTGSTAESKNEGCLKWLDDQPLGSVLFVSFGSGGTLSCEQLNELALGLEMSEQRFLWVVRSPNNAA 314 (482)
Q Consensus 235 ~p~~p~~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~ 314 (482)
.....++.++||+.... ....+|....+++++|||++||......+.+..++++++..+.+++|..+.+...
T Consensus 218 ~~~~~~~~~vGp~~~~~-------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~- 289 (415)
T 3rsc_A 218 DTFDDRFVFVGPCFDDR-------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQVDP- 289 (415)
T ss_dssp GGCCTTEEECCCCCCCC-------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTTSCG-
T ss_pred ccCCCceEEeCCCCCCc-------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCCCCh-
Confidence 11223689999987542 1233466555667899999999977777889999999999898888887753210
Q ss_pred CCcccccCCCCCCCCCCchhHHhhhcCCCeeeccccchhhhhhcccccccccccCchhHHHHhhcCCcEeeccccccchh
Q 045267 315 NSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWAPQAQVLSHGSTGGFLCHCGWNSVLESVVNGVPLIAWPLYAEQKM 394 (482)
Q Consensus 315 ~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ipq~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~ 394 (482)
+....+ +.|+++.+|+|+.++|++++ +||||||+||+.||+++|+|+|++|...||+.
T Consensus 290 -----------~~l~~~---------~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~ 347 (415)
T 3rsc_A 290 -----------AALGDL---------PPNVEAHRWVPHVKVLEQAT--VCVTHGGMGTLMEALYWGRPLVVVPQSFDVQP 347 (415)
T ss_dssp -----------GGGCCC---------CTTEEEESCCCHHHHHHHEE--EEEESCCHHHHHHHHHTTCCEEECCCSGGGHH
T ss_pred -----------HHhcCC---------CCcEEEEecCCHHHHHhhCC--EEEECCcHHHHHHHHHhCCCEEEeCCcchHHH
Confidence 111122 35898999999999999999 99999999999999999999999999999999
Q ss_pred hHHHHHhhcceeeeeccCCCCccCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHh
Q 045267 395 NAVILTEDVKLALRPKANENGIVGRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQLASKWN 471 (482)
Q Consensus 395 na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~ 471 (482)
||+++++ .|+|..+..++ ++++.|+++|.++|+|+ +++++++++++.+.+ .++..++++.+.+.+.
T Consensus 348 ~a~~l~~-~g~g~~~~~~~---~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~ 413 (415)
T 3rsc_A 348 MARRVDQ-LGLGAVLPGEK---ADGDTLLAAVGAVAADP---ALLARVEAMRGHVRR----AGGAARAADAVEAYLA 413 (415)
T ss_dssp HHHHHHH-HTCEEECCGGG---CCHHHHHHHHHHHHTCH---HHHHHHHHHHHHHHH----SCHHHHHHHHHHHHHH
T ss_pred HHHHHHH-cCCEEEcccCC---CCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh----cCHHHHHHHHHHHHhh
Confidence 9999999 99999998887 99999999999999997 999999999999985 6777888888877654
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=2.7e-38 Score=318.78 Aligned_cols=383 Identities=17% Similarity=0.191 Sum_probs=256.0
Q ss_pred ccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEecCCCCCCC-----cc
Q 045267 8 QAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLPVSLNDVA-----ED 82 (482)
Q Consensus 8 ~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~ 82 (482)
|.++||+|+++++.||++|++.||++|+++ ||+|+|++++. ...... ..|+.+..++....... ..
T Consensus 2 m~M~~il~~~~~~~Ghv~~~~~La~~L~~~-GheV~v~~~~~------~~~~~~--~~G~~~~~~~~~~~~~~~~~~~~~ 72 (402)
T 3ia7_A 2 MRQRHILFANVQGHGHVYPSLGLVSELARR-GHRITYVTTPL------FADEVK--AAGAEVVLYKSEFDTFHVPEVVKQ 72 (402)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEECHH------HHHHHH--HTTCEEEECCCGGGTSSSSSSSCC
T ss_pred CCCCEEEEEeCCCCcccccHHHHHHHHHhC-CCEEEEEcCHH------HHHHHH--HcCCEEEecccccccccccccccc
Confidence 556699999999999999999999999988 99999999763 222233 23688888772211111 11
Q ss_pred hhhHHHHHHHHHhhhHHHHHHHHHHhhCCCccEEEeC-CCCccHHHHHHHcCCccEEEccchHHHHHHHhhhhhhhccCC
Q 045267 83 ARAETVISLTVLRSLPCLRQELTSLVAKATVAALVVD-LFGTDAFDVAQEFNISPYIFYPSTAMCLSLFLHLEKLDQMVP 161 (482)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~pD~vi~D-~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~ 161 (482)
......+...+..........+.+++++++||+||+| ...+++..+|+.+|||++.+.+...... .+...+...
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~-~~~~~~~~~---- 147 (402)
T 3ia7_A 73 EDAETQLHLVYVRENVAILRAAEEALGDNPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANE-HYSLFKELW---- 147 (402)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBT-TBCHHHHHH----
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCc-ccccccccc----
Confidence 1122222220112222333445566678899999999 7777888999999999998764332110 000000000
Q ss_pred CCCcccCCCCcccCCCCCccccCCCCcccccccchHHHHHHHHHh------h-cc-cccEEEEcCccccchhHHHHhhhc
Q 045267 162 RDCEYRDMSEPVQIPGCIPVHGGYLLDPVQDRKNEAYRWVLHHAK------R-YK-LAEGIIVNSFTDLEGGALKALQHQ 233 (482)
Q Consensus 162 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~-~~~~~~~~s~~~l~~~~~~~~~~~ 233 (482)
+.... ............+..+..... . .. ..+..+......++.. .
T Consensus 148 ------------------~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~-- 201 (402)
T 3ia7_A 148 ------------------KSNGQ-RHPADVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPF-----A-- 201 (402)
T ss_dssp ------------------HHHTC-CCGGGSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTT-----G--
T ss_pred ------------------ccccc-cChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCc-----c--
Confidence 00000 000000000111111111110 0 00 0123333333333322 0
Q ss_pred CCCCCCCeEeeccCcCCCCCCccccccccccccCCCCCcEEEEeccCCCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCC
Q 045267 234 DEPGKPPVYPVGPLVKTGSTAESKNEGCLKWLDDQPLGSVLFVSFGSGGTLSCEQLNELALGLEMSEQRFLWVVRSPNNA 313 (482)
Q Consensus 234 ~~p~~p~~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~ 313 (482)
.....++.++||+..... ...+|....+++++|||++||......+.+..++++++..+.+++|..+.+...
T Consensus 202 -~~~~~~~~~vGp~~~~~~-------~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 273 (402)
T 3ia7_A 202 -ETFDERFAFVGPTLTGRD-------GQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFLDP 273 (402)
T ss_dssp -GGCCTTEEECCCCCCC-----------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTSCG
T ss_pred -ccCCCCeEEeCCCCCCcc-------cCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcCCh
Confidence 002346999999865422 223466555667899999999987777889999999998888888887753210
Q ss_pred CCCcccccCCCCCCCCCCchhHHhhhcCCCeeeccccchhhhhhcccccccccccCchhHHHHhhcCCcEeeccc-cccc
Q 045267 314 ANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWAPQAQVLSHGSTGGFLCHCGWNSVLESVVNGVPLIAWPL-YAEQ 392 (482)
Q Consensus 314 ~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ipq~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~-~~DQ 392 (482)
+.... .+.|+.+.+|+|+.++|++++ ++|||||+||+.||+++|+|+|++|. ..||
T Consensus 274 ------------~~~~~---------~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q 330 (402)
T 3ia7_A 274 ------------AVLGP---------LPPNVEAHQWIPFHSVLAHAR--ACLTHGTTGAVLEAFAAGVPLVLVPHFATEA 330 (402)
T ss_dssp ------------GGGCS---------CCTTEEEESCCCHHHHHTTEE--EEEECCCHHHHHHHHHTTCCEEECGGGCGGG
T ss_pred ------------hhhCC---------CCCcEEEecCCCHHHHHhhCC--EEEECCCHHHHHHHHHhCCCEEEeCCCcccH
Confidence 11112 235899999999999999999 99999999999999999999999999 9999
Q ss_pred hhhHHHHHhhcceeeeeccCCCCccCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHhh
Q 045267 393 KMNAVILTEDVKLALRPKANENGIVGRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQLASKWNN 472 (482)
Q Consensus 393 ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~ 472 (482)
+.||.++++ .|+|..+..++ ++++.|.+++.++|+|+ +++++++++++++.+ .++..++++.+.+.+.+
T Consensus 331 ~~~a~~~~~-~g~g~~~~~~~---~~~~~l~~~~~~ll~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 331 APSAERVIE-LGLGSVLRPDQ---LEPASIREAVERLAADS---AVRERVRRMQRDILS----SGGPARAADEVEAYLGR 399 (402)
T ss_dssp HHHHHHHHH-TTSEEECCGGG---CSHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT----SCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCCEEEccCCC---CCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHhh----CChHHHHHHHHHHHHhh
Confidence 999999999 99999998877 89999999999999997 899999999999874 67888888888777654
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=4.6e-38 Score=321.49 Aligned_cols=381 Identities=13% Similarity=0.098 Sum_probs=241.7
Q ss_pred hhccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEecCCCC--CCC---
Q 045267 6 QAQAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLPVSLN--DVA--- 80 (482)
Q Consensus 6 ~~~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~--- 80 (482)
..+.+|||+|+++++.||++|+++||++|+++ ||+|+|++++.. ..... ..|+.+..++...+ +..
T Consensus 16 ~~~~~mrIl~~~~~~~GHv~p~l~la~~L~~~-GheV~~~~~~~~------~~~v~--~~G~~~~~i~~~~~~~~~~~~~ 86 (441)
T 2yjn_A 16 PRGSHMRVVFSSMASKSHLFGLVPLAWAFRAA-GHEVRVVASPAL------TEDIT--AAGLTAVPVGTDVDLVDFMTHA 86 (441)
T ss_dssp ---CCCEEEEECCSCHHHHTTTHHHHHHHHHT-TCEEEEEECGGG------HHHHH--TTTCCEEECSCCCCHHHHHHHT
T ss_pred ccCCccEEEEEcCCCcchHhHHHHHHHHHHHC-CCeEEEEeCchh------HHHHH--hCCCceeecCCccchHHHhhhh
Confidence 45667899999999999999999999999988 999999998742 22233 34788888873211 100
Q ss_pred -----------------cc---hhhHHHHHHHHHhh----h-HH-HHHHHHHHhhCCCccEEEeCCCCccHHHHHHHcCC
Q 045267 81 -----------------ED---ARAETVISLTVLRS----L-PC-LRQELTSLVAKATVAALVVDLFGTDAFDVAQEFNI 134 (482)
Q Consensus 81 -----------------~~---~~~~~~~~~~~~~~----~-~~-l~~~l~~~~~~~~pD~vi~D~~~~~~~~~A~~lgI 134 (482)
.. +.........+... . .. ....+.+++++++||+||+|...+++..+|+.+||
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~aA~~lgi 166 (441)
T 2yjn_A 87 GHDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKWRPDLVIWEPLTFAAPIAAAVTGT 166 (441)
T ss_dssp THHHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHHTC
T ss_pred hcccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhcCCCEEEecCcchhHHHHHHHcCC
Confidence 00 00000111111110 0 01 22223334455699999999987888899999999
Q ss_pred ccEEEccchHHHHHHHhhhhhhhccCCCCCcccCCCCcccCCCCCccccCCCCcccccccchHHHHHHHHHhh-cc----
Q 045267 135 SPYIFYPSTAMCLSLFLHLEKLDQMVPRDCEYRDMSEPVQIPGCIPVHGGYLLDPVQDRKNEAYRWVLHHAKR-YK---- 209 (482)
Q Consensus 135 P~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---- 209 (482)
|++.+...+................ .|. . ...++....+..+...... -.
T Consensus 167 P~v~~~~~~~~~~~~~~~~~~~~~~---------------~~~------~----~~~~~~~~~l~~~~~~~g~~~~~~~~ 221 (441)
T 2yjn_A 167 PHARLLWGPDITTRARQNFLGLLPD---------------QPE------E----HREDPLAEWLTWTLEKYGGPAFDEEV 221 (441)
T ss_dssp CEEEECSSCCHHHHHHHHHHHHGGG---------------SCT------T----TCCCHHHHHHHHHHHHTTCCCCCGGG
T ss_pred CEEEEecCCCcchhhhhhhhhhccc---------------ccc------c----cccchHHHHHHHHHHHcCCCCCCccc
Confidence 9998865443221111000000000 010 0 0111111222222222211 00
Q ss_pred -cccEEEEcCccccchhHHHHhhhcCCCCCCCeEeeccCcCCCCCCccccccccccccCCCCCcEEEEeccCCCCC---C
Q 045267 210 -LAEGIIVNSFTDLEGGALKALQHQDEPGKPPVYPVGPLVKTGSTAESKNEGCLKWLDDQPLGSVLFVSFGSGGTL---S 285 (482)
Q Consensus 210 -~~~~~~~~s~~~l~~~~~~~~~~~~~p~~p~~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~---~ 285 (482)
..+..+.+....++.+ . ..+. ..+++... ..+.++.+|++..+++++|||++||+... .
T Consensus 222 ~~~~~~l~~~~~~~~~~---------~-~~~~-~~~~~~~~------~~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~ 284 (441)
T 2yjn_A 222 VVGQWTIDPAPAAIRLD---------T-GLKT-VGMRYVDY------NGPSVVPEWLHDEPERRRVCLTLGISSRENSIG 284 (441)
T ss_dssp TSCSSEEECSCGGGSCC---------C-CCCE-EECCCCCC------CSSCCCCGGGSSCCSSCEEEEEC----------
T ss_pred cCCCeEEEecCccccCC---------C-CCCC-CceeeeCC------CCCcccchHhhcCCCCCEEEEECCCCcccccCh
Confidence 0112222222222211 0 1111 11222110 12345668988767778999999998653 3
Q ss_pred HHHHHHHHHHHHhcCCceEEEEeCCCCCCCCcccccCCCCCCCCCCchhHHhhhcCCCeeeccccchhhhhhcccccccc
Q 045267 286 CEQLNELALGLEMSEQRFLWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWAPQAQVLSHGSTGGFL 365 (482)
Q Consensus 286 ~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ipq~~lL~~~~~~~~I 365 (482)
.+.+..++++++..+.+++|+.++... +....+ ++|+++.+|+||.++|+.++ +||
T Consensus 285 ~~~~~~~~~al~~~~~~~v~~~g~~~~-------------~~l~~~---------~~~v~~~~~~~~~~ll~~ad--~~V 340 (441)
T 2yjn_A 285 QVSIEELLGAVGDVDAEIIATFDAQQL-------------EGVANI---------PDNVRTVGFVPMHALLPTCA--ATV 340 (441)
T ss_dssp CCSTTTTHHHHHTSSSEEEECCCTTTT-------------SSCSSC---------CSSEEECCSCCHHHHGGGCS--EEE
T ss_pred HHHHHHHHHHHHcCCCEEEEEECCcch-------------hhhccC---------CCCEEEecCCCHHHHHhhCC--EEE
Confidence 456777889998889999998875321 111122 34899999999999999999 999
Q ss_pred cccCchhHHHHhhcCCcEeeccccccchhhHHHHHhhcceeeeeccCCCCccCHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 045267 366 CHCGWNSVLESVVNGVPLIAWPLYAEQKMNAVILTEDVKLALRPKANENGIVGRDEIAKVVKALMEGEQGKEVRNKMKDL 445 (482)
Q Consensus 366 ~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l 445 (482)
||||+||++||+++|+|+|++|...||+.||+++++ .|+|+.++.++ ++++.|+++|.++++|+ +++++++++
T Consensus 341 ~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~~~---~~~~~l~~~i~~ll~~~---~~~~~~~~~ 413 (441)
T 2yjn_A 341 HHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQE-FGAGIALPVPE---LTPDQLRESVKRVLDDP---AHRAGAARM 413 (441)
T ss_dssp ECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCTTT---CCHHHHHHHHHHHHHCH---HHHHHHHHH
T ss_pred ECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHH-cCCEEEccccc---CCHHHHHHHHHHHhcCH---HHHHHHHHH
Confidence 999999999999999999999999999999999999 99999998887 99999999999999997 899999999
Q ss_pred HHHHHHHhhcCCchHHHHHHHHHHHhh
Q 045267 446 KDAAAAVLSENGSSTKALSQLASKWNN 472 (482)
Q Consensus 446 ~~~~~~a~~~~g~~~~~~~~~~~~~~~ 472 (482)
++++.+ .++..++++.+.+.+.+
T Consensus 414 ~~~~~~----~~~~~~~~~~i~~~~~~ 436 (441)
T 2yjn_A 414 RDDMLA----EPSPAEVVGICEELAAG 436 (441)
T ss_dssp HHHHHT----SCCHHHHHHHHHHHHHC
T ss_pred HHHHHc----CCCHHHHHHHHHHHHHh
Confidence 999984 56677777777665543
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=4.9e-37 Score=308.11 Aligned_cols=361 Identities=13% Similarity=0.070 Sum_probs=246.8
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEecCCC-CC--------CC-
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLPVSL-ND--------VA- 80 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~--------~~- 80 (482)
|||++++.++.||++|+++|+++|+++ ||+|+|++++.. ..... ..++.+..++... .+ .+
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~-Gh~V~~~~~~~~------~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNA-GHQVVMAANQDM------GPVVT--GVGLPAVATTDLPIRHFITTDREGRPE 71 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEECGGG------HHHHH--HTTCCEEESCSSCHHHHHHBCTTSCBC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHC-CCEEEEEeCHHH------HHHHH--hCCCEEEEeCCcchHHHHhhhcccCcc
Confidence 589999999999999999999999988 999999997632 12222 2357777776221 00 11
Q ss_pred ---cchhhHHHH-HHHHHhhhHHHHHHHHHHhhCCCccEEEeCCCCccHHHHHHHcCCccEEEccchHHHHHHHhhhhhh
Q 045267 81 ---EDARAETVI-SLTVLRSLPCLRQELTSLVAKATVAALVVDLFGTDAFDVAQEFNISPYIFYPSTAMCLSLFLHLEKL 156 (482)
Q Consensus 81 ---~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~~~~pD~vi~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~ 156 (482)
........+ ..............+.+++++.+||+||+|...+++..+|+.+|||++.+...+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~----------- 140 (384)
T 2p6p_A 72 AIPSDPVAQARFTGRWFARMAASSLPRMLDFSRAWRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD----------- 140 (384)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC-----------
T ss_pred ccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhccCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc-----------
Confidence 100111111 11111111112223334445569999999988778889999999998876532100
Q ss_pred hccCCCCCcccCCCCcccCCCCCccccCCCCcccccccchHHHHHHHHHhh--cccccEEEEcCccccchhHHHHhhhcC
Q 045267 157 DQMVPRDCEYRDMSEPVQIPGCIPVHGGYLLDPVQDRKNEAYRWVLHHAKR--YKLAEGIIVNSFTDLEGGALKALQHQD 234 (482)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~l~~~~~~~~~~~~ 234 (482)
+ .. +.+......+.+...... ....+.++.++...++..
T Consensus 141 -------------------~-------~~----~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~--------- 181 (384)
T 2p6p_A 141 -------------------A-------DG----IHPGADAELRPELSELGLERLPAPDLFIDICPPSLRPA--------- 181 (384)
T ss_dssp -------------------C-------TT----THHHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT---------
T ss_pred -------------------c-------ch----hhHHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC---------
Confidence 0 00 000011111222222110 011345677777666543
Q ss_pred CCCC-CCeEeeccCcCCCCCCccccccccccccCCCCCcEEEEeccCCCCC-----CHHHHHHHHHHHHhcCCceEEEEe
Q 045267 235 EPGK-PPVYPVGPLVKTGSTAESKNEGCLKWLDDQPLGSVLFVSFGSGGTL-----SCEQLNELALGLEMSEQRFLWVVR 308 (482)
Q Consensus 235 ~p~~-p~~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~-----~~~~~~~~~~al~~~~~~~i~~~~ 308 (482)
.+.. +++.+++. . .+.++.+|++..+++++|||++||+... ..+.+..++++++..+.+++|+.+
T Consensus 182 ~~~~~~~~~~~~~---~------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g 252 (384)
T 2p6p_A 182 NAAPARMMRHVAT---S------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAP 252 (384)
T ss_dssp TSCCCEECCCCCC---C------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECC
T ss_pred CCCCCCceEecCC---C------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeC
Confidence 1110 12333321 1 1234567887655678999999998764 457788899999988999999876
Q ss_pred CCCCCCCCcccccCCCCCCCCCCchhHHhhhcCCCeeeccccchhhhhhcccccccccccCchhHHHHhhcCCcEeeccc
Q 045267 309 SPNNAANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWAPQAQVLSHGSTGGFLCHCGWNSVLESVVNGVPLIAWPL 388 (482)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ipq~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~ 388 (482)
+.. .+.+. . .++|+.+ +|+||.++|++++ +||||||+||+.||+++|+|+|++|.
T Consensus 253 ~~~--------------------~~~l~-~-~~~~v~~-~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~v~~p~ 307 (384)
T 2p6p_A 253 DTV--------------------AEALR-A-EVPQARV-GWTPLDVVAPTCD--LLVHHAGGVSTLTGLSAGVPQLLIPK 307 (384)
T ss_dssp HHH--------------------HHHHH-H-HCTTSEE-ECCCHHHHGGGCS--EEEECSCTTHHHHHHHTTCCEEECCC
T ss_pred CCC--------------------HHhhC-C-CCCceEE-cCCCHHHHHhhCC--EEEeCCcHHHHHHHHHhCCCEEEccC
Confidence 421 01111 1 2568999 9999999999999 99999999999999999999999999
Q ss_pred cccchhhHHHHHhhcceeeeeccCCCCccCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHH
Q 045267 389 YAEQKMNAVILTEDVKLALRPKANENGIVGRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQLAS 468 (482)
Q Consensus 389 ~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~ 468 (482)
..||+.||.++++ .|+|+.++.++ ++++.|+++|+++|+|+ +++++++++++++++ .++.+++++.+.+
T Consensus 308 ~~dq~~~a~~~~~-~g~g~~~~~~~---~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~i~~ 376 (384)
T 2p6p_A 308 GSVLEAPARRVAD-YGAAIALLPGE---DSTEAIADSCQELQAKD---TYARRAQDLSREISG----MPLPATVVTALEQ 376 (384)
T ss_dssp SHHHHHHHHHHHH-HTSEEECCTTC---CCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT----SCCHHHHHHHHHH
T ss_pred cccchHHHHHHHH-CCCeEecCcCC---CCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh----CCCHHHHHHHHHH
Confidence 9999999999999 99999998777 89999999999999997 899999999999985 5678888888877
Q ss_pred HHhhccC
Q 045267 469 KWNNNEG 475 (482)
Q Consensus 469 ~~~~~~~ 475 (482)
.+-.+++
T Consensus 377 ~~~~~~~ 383 (384)
T 2p6p_A 377 LAHHHHH 383 (384)
T ss_dssp HHHHHC-
T ss_pred HhhhccC
Confidence 7766654
No 15
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.3e-36 Score=309.64 Aligned_cols=382 Identities=17% Similarity=0.167 Sum_probs=249.4
Q ss_pred ccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEecCCCC-CCCc----c
Q 045267 8 QAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLPVSLN-DVAE----D 82 (482)
Q Consensus 8 ~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~----~ 82 (482)
|.+|||+|+++++.||++|++.|+++|+++ ||+|++++++... .... ..|+.+..++.... .... .
T Consensus 5 m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~-G~~V~~~~~~~~~------~~~~--~~g~~~~~~~~~~~~~~~~~~~~~ 75 (430)
T 2iyf_A 5 TTPAHIAMFSIAAHGHVNPSLEVIRELVAR-GHRVTYAIPPVFA------DKVA--ATGPRPVLYHSTLPGPDADPEAWG 75 (430)
T ss_dssp ---CEEEEECCSCHHHHGGGHHHHHHHHHT-TCEEEEEECGGGH------HHHH--TTSCEEEECCCCSCCTTSCGGGGC
T ss_pred cccceEEEEeCCCCccccchHHHHHHHHHC-CCeEEEEeCHHHH------HHHH--hCCCEEEEcCCcCccccccccccc
Confidence 456799999999999999999999999988 9999999987421 1122 34688887773211 1100 0
Q ss_pred hhhHHHHHHHHHhhhHHHHHHHHHHhhCCCccEEEeCCCCccHHHHHHHcCCccEEEccchHHHHHHHhhhhhhhccCCC
Q 045267 83 ARAETVISLTVLRSLPCLRQELTSLVAKATVAALVVDLFGTDAFDVAQEFNISPYIFYPSTAMCLSLFLHLEKLDQMVPR 162 (482)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~pD~vi~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (482)
......+ ..+..........+.+++++.+||+||+|...+++..+|+.+|||++.+++....... +...+. ....
T Consensus 76 ~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~-~~~~~~--~~~~- 150 (430)
T 2iyf_A 76 STLLDNV-EPFLNDAIQALPQLADAYADDIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKG-YEEEVA--EPMW- 150 (430)
T ss_dssp SSHHHHH-HHHHHHHHHHHHHHHHHHTTSCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTT-HHHHTH--HHHH-
T ss_pred hhhHHHH-HHHHHHHHHHHHHHHHHhhccCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccc-cccccc--cchh-
Confidence 0111111 1111112233444556667789999999987777889999999999988765431100 000000 0000
Q ss_pred CCcccCCCCcccCCCCCccccCCCCcccccccchHHHHHHHHHh-------hcccccEEEEcCccccchhHHHHhhhcCC
Q 045267 163 DCEYRDMSEPVQIPGCIPVHGGYLLDPVQDRKNEAYRWVLHHAK-------RYKLAEGIIVNSFTDLEGGALKALQHQDE 235 (482)
Q Consensus 163 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~s~~~l~~~~~~~~~~~~~ 235 (482)
+...+ .+ ........+..+..... .....+.++.++...++... .
T Consensus 151 -------------~~~~~-----~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~----~---- 202 (430)
T 2iyf_A 151 -------------REPRQ-----TE--RGRAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHA----D---- 202 (430)
T ss_dssp -------------HHHHH-----SH--HHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTG----G----
T ss_pred -------------hhhcc-----ch--HHHHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCc----c----
Confidence 00000 00 00000001111111110 01134567777777766531 1
Q ss_pred CCCCC-eEeeccCcCCCCCCccccccccccccCCCCCcEEEEeccCCCCCCHHHHHHHHHHHHhc-CCceEEEEeCCCCC
Q 045267 236 PGKPP-VYPVGPLVKTGSTAESKNEGCLKWLDDQPLGSVLFVSFGSGGTLSCEQLNELALGLEMS-EQRFLWVVRSPNNA 313 (482)
Q Consensus 236 p~~p~-~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~ 313 (482)
+..++ ++++||.+.... ...+|....+++++||+++||+.....+.+..++++++.. +.+++|.++.+...
T Consensus 203 ~~~~~~v~~vG~~~~~~~-------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~ 275 (430)
T 2iyf_A 203 RVDEDVYTFVGACQGDRA-------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKVTP 275 (430)
T ss_dssp GSCTTTEEECCCCC------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---CG
T ss_pred cCCCccEEEeCCcCCCCC-------CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCCCh
Confidence 12246 999998654321 1224665555678999999998855677788899999886 77888887753210
Q ss_pred CCCcccccCCCCCCCCCCchhHHhhhcCCCeeeccccchhhhhhcccccccccccCchhHHHHhhcCCcEeeccccccch
Q 045267 314 ANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWAPQAQVLSHGSTGGFLCHCGWNSVLESVVNGVPLIAWPLYAEQK 393 (482)
Q Consensus 314 ~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ipq~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~ 393 (482)
+....+ +.|+.+.+|+||.++|++++ +||||||+||+.||+++|+|+|++|..+||.
T Consensus 276 ------------~~l~~~---------~~~v~~~~~~~~~~~l~~ad--~~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~ 332 (430)
T 2iyf_A 276 ------------AELGEL---------PDNVEVHDWVPQLAILRQAD--LFVTHAGAGGSQEGLATATPMIAVPQAVDQF 332 (430)
T ss_dssp ------------GGGCSC---------CTTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHTTCCEEECCCSHHHH
T ss_pred ------------HHhccC---------CCCeEEEecCCHHHHhhccC--EEEECCCccHHHHHHHhCCCEEECCCccchH
Confidence 011112 35899999999999999999 9999999999999999999999999999999
Q ss_pred hhHHHHHhhcceeeeeccCCCCccCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHhh
Q 045267 394 MNAVILTEDVKLALRPKANENGIVGRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQLASKWNN 472 (482)
Q Consensus 394 ~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~ 472 (482)
.|+.++++ .|+|+.+..++ ++++.|+++|.++++|+ ++++++.++++++.+ + ++..+.++.+.+.+.+
T Consensus 333 ~~a~~~~~-~g~g~~~~~~~---~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~---~-~~~~~~~~~i~~~~~~ 400 (430)
T 2iyf_A 333 GNADMLQG-LGVARKLATEE---ATADLLRETALALVDDP---EVARRLRRIQAEMAQ---E-GGTRRAADLIEAELPA 400 (430)
T ss_dssp HHHHHHHH-TTSEEECCCC----CCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHH---H-CHHHHHHHHHHTTSCC
T ss_pred HHHHHHHH-cCCEEEcCCCC---CCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh---c-CcHHHHHHHHHHHhhc
Confidence 99999999 99999998777 89999999999999987 899999999998875 3 5666777777655443
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=2.4e-35 Score=297.20 Aligned_cols=359 Identities=14% Similarity=0.107 Sum_probs=221.1
Q ss_pred hccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEecCCCC---------
Q 045267 7 AQAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLPVSLN--------- 77 (482)
Q Consensus 7 ~~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--------- 77 (482)
...+|||+|++.++.||++|++.|+++|+++ ||+|++++++.. ..... ..|+.+..++...+
T Consensus 12 ~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~-GheV~v~~~~~~------~~~~~--~~G~~~~~~~~~~~~~~~~~~~~ 82 (398)
T 4fzr_A 12 RGSHMRILVIAGCSEGFVMPLVPLSWALRAA-GHEVLVAASENM------GPTVT--GAGLPFAPTCPSLDMPEVLSWDR 82 (398)
T ss_dssp ---CCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEEEGGG------HHHHH--HTTCCEEEEESSCCHHHHHSBCT
T ss_pred CCCceEEEEEcCCCcchHHHHHHHHHHHHHC-CCEEEEEcCHHH------HHHHH--hCCCeeEecCCccchHhhhhhhc
Confidence 3456899999999999999999999999988 999999997632 22222 23566666652100
Q ss_pred -C----CC-cchhhHHHHHHHHHhhhHHHHHHHHHHhhCCCccEEEeCCCCccHHHHHHHcCCccEEEccchHHHHHHHh
Q 045267 78 -D----VA-EDARAETVISLTVLRSLPCLRQELTSLVAKATVAALVVDLFGTDAFDVAQEFNISPYIFYPSTAMCLSLFL 151 (482)
Q Consensus 78 -~----~~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~pD~vi~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~ 151 (482)
. .+ ............+..........+.+++++++||+|++|...+++..+|+.+|||++.+...........
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~- 161 (398)
T 4fzr_A 83 EGNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERWKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIK- 161 (398)
T ss_dssp TSCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHH-
T ss_pred cCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhh-
Confidence 0 00 0111111222222222223333444555667999999998888888999999999887665421110000
Q ss_pred hhhhhhccCCCCCcccCCCCcccCCCCCccccCCCCcccccccchHHHHHHHHHh--hcccccEEEEcCccccchhHHHH
Q 045267 152 HLEKLDQMVPRDCEYRDMSEPVQIPGCIPVHGGYLLDPVQDRKNEAYRWVLHHAK--RYKLAEGIIVNSFTDLEGGALKA 229 (482)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~s~~~l~~~~~~~ 229 (482)
......+......+. ........+......+....
T Consensus 162 ----------------------------------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 198 (398)
T 4fzr_A 162 ----------------------------------------SAGVGELAPELAELGLTDFPDPLLSIDVCPPSMEAQP--- 198 (398)
T ss_dssp ----------------------------------------HHHHHHTHHHHHTTTCSSCCCCSEEEECSCGGGC------
T ss_pred ----------------------------------------HHHHHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCCC---
Confidence 000000011111000 00111222222222222210
Q ss_pred hhhcCCCCCCCeEeeccCcCCCCCCccccccccccccCCCCCcEEEEeccCCCCC--------CHHHHHHHHHHHHhcCC
Q 045267 230 LQHQDEPGKPPVYPVGPLVKTGSTAESKNEGCLKWLDDQPLGSVLFVSFGSGGTL--------SCEQLNELALGLEMSEQ 301 (482)
Q Consensus 230 ~~~~~~p~~p~~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~--------~~~~~~~~~~al~~~~~ 301 (482)
. .+.. .+.++++. ..+..+.+|+...+++++|||++||+... ..+.+..++++++..+.
T Consensus 199 --~--~~~~-~~~~~~~~--------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~ 265 (398)
T 4fzr_A 199 --K--PGTT-KMRYVPYN--------GRNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGF 265 (398)
T ss_dssp -----CCCE-ECCCCCCC--------CSSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGTC
T ss_pred --C--CCCC-CeeeeCCC--------CCCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCC
Confidence 0 0000 11122211 02234456766556678999999998543 34568889999998899
Q ss_pred ceEEEEeCCCCCCCCcccccCCCCCCCCCCchhHHhhhcCCCeeeccccchhhhhhcccccccccccCchhHHHHhhcCC
Q 045267 302 RFLWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWAPQAQVLSHGSTGGFLCHCGWNSVLESVVNGV 381 (482)
Q Consensus 302 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ipq~~lL~~~~~~~~I~HGG~gs~~eal~~Gv 381 (482)
+++|+.++... .....+ ++|+++.+|+|+.++|++++ +||||||.||+.||+++|+
T Consensus 266 ~~v~~~~~~~~-------------~~l~~~---------~~~v~~~~~~~~~~ll~~ad--~~v~~gG~~t~~Ea~~~G~ 321 (398)
T 4fzr_A 266 EVVVAVSDKLA-------------QTLQPL---------PEGVLAAGQFPLSAIMPACD--VVVHHGGHGTTLTCLSEGV 321 (398)
T ss_dssp EEEECCCC---------------------C---------CTTEEEESCCCHHHHGGGCS--EEEECCCHHHHHHHHHTTC
T ss_pred EEEEEeCCcch-------------hhhccC---------CCcEEEeCcCCHHHHHhhCC--EEEecCCHHHHHHHHHhCC
Confidence 99988765321 111222 35899999999999999999 9999999999999999999
Q ss_pred cEeeccccccchhhHHHHHhhcceeeeeccCCCCccCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcCCchHH
Q 045267 382 PLIAWPLYAEQKMNAVILTEDVKLALRPKANENGIVGRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTK 461 (482)
Q Consensus 382 P~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~ 461 (482)
|+|++|...||+.|+.++++ .|+|+.++.++ ++++.|+++|.++|+|+ ++++++++.++++.+ ..+..+
T Consensus 322 P~v~~p~~~~q~~~a~~~~~-~g~g~~~~~~~---~~~~~l~~ai~~ll~~~---~~~~~~~~~~~~~~~----~~~~~~ 390 (398)
T 4fzr_A 322 PQVSVPVIAEVWDSARLLHA-AGAGVEVPWEQ---AGVESVLAACARIRDDS---SYVGNARRLAAEMAT----LPTPAD 390 (398)
T ss_dssp CEEECCCSGGGHHHHHHHHH-TTSEEECC----------CHHHHHHHHHHCT---HHHHHHHHHHHHHTT----SCCHHH
T ss_pred CEEecCCchhHHHHHHHHHH-cCCEEecCccc---CCHHHHHHHHHHHHhCH---HHHHHHHHHHHHHHc----CCCHHH
Confidence 99999999999999999999 99999999887 89999999999999998 999999999999884 566666
Q ss_pred HHHHH
Q 045267 462 ALSQL 466 (482)
Q Consensus 462 ~~~~~ 466 (482)
.++.+
T Consensus 391 ~~~~l 395 (398)
T 4fzr_A 391 IVRLI 395 (398)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66654
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=2.8e-34 Score=289.43 Aligned_cols=350 Identities=15% Similarity=0.170 Sum_probs=230.7
Q ss_pred cCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEecCCCC-----------
Q 045267 9 AAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLPVSLN----------- 77 (482)
Q Consensus 9 ~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----------- 77 (482)
++|||+|++.++.||++|++.|+++|.++ ||+|+++++ ...+ ... ..|+.+..++...+
T Consensus 19 ~~MrIl~~~~~~~Ghv~~~~~La~~L~~~-GheV~v~~~-~~~~------~~~--~~G~~~~~~~~~~~~~~~~~~~~~~ 88 (398)
T 3oti_A 19 RHMRVLFVSSPGIGHLFPLIQLAWGFRTA-GHDVLIAVA-EHAD------RAA--AAGLEVVDVAPDYSAVKVFEQVAKD 88 (398)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEES-SCHH------HHH--TTTCEEEESSTTCCHHHHHHHHHHH
T ss_pred hcCEEEEEcCCCcchHhHHHHHHHHHHHC-CCEEEEecc-chHH------HHH--hCCCeeEecCCccCHHHHhhhcccC
Confidence 35799999999999999999999999988 999999998 4322 112 34688877763211
Q ss_pred ----------CCCcchhhH-HHHHHHHHhhhHHHHHHHHHHhhCCCccEEEeCCCCccHHHHHHHcCCccEEEccchHHH
Q 045267 78 ----------DVAEDARAE-TVISLTVLRSLPCLRQELTSLVAKATVAALVVDLFGTDAFDVAQEFNISPYIFYPSTAMC 146 (482)
Q Consensus 78 ----------~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~pD~vi~D~~~~~~~~~A~~lgIP~v~~~~~~~~~ 146 (482)
......... ..+.......... +.+++++++||+||+|...+++..+|+.+|||++.+.......
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~l~~~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~ 164 (398)
T 3oti_A 89 NPRFAETVATRPAIDLEEWGVQIAAVNRPLVDG----TMALVDDYRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRT 164 (398)
T ss_dssp CHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHH----HHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCC
T ss_pred CccccccccCChhhhHHHHHHHHHHHHHHHHHH----HHHHHHHcCCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCc
Confidence 000011111 1111122222233 3344455699999999888888899999999988755321110
Q ss_pred HHHHhhhhhhhccCCCCCcccCCCCcccCCCCCccccCCCCcccccccchHHHHHHHHHhh-cccccEEEEcCccccchh
Q 045267 147 LSLFLHLEKLDQMVPRDCEYRDMSEPVQIPGCIPVHGGYLLDPVQDRKNEAYRWVLHHAKR-YKLAEGIIVNSFTDLEGG 225 (482)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~l~~~ 225 (482)
.. ........ +......+.. .......+......+...
T Consensus 165 -----------------------------~~--------~~~~~~~~----l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (398)
T 3oti_A 165 -----------------------------RG--------MHRSIASF----LTDLMDKHQVSLPEPVATIESFPPSLLLE 203 (398)
T ss_dssp -----------------------------TT--------HHHHHHTT----CHHHHHHTTCCCCCCSEEECSSCGGGGTT
T ss_pred -----------------------------cc--------hhhHHHHH----HHHHHHHcCCCCCCCCeEEEeCCHHHCCC
Confidence 00 00000000 1111111110 111122222222222211
Q ss_pred HHHHhhhcCCCCCCCeEeeccCcCCCCCCccccccccccccCCCCCcEEEEeccCCCCC--CHHHHHHHHHHHHhcCCce
Q 045267 226 ALKALQHQDEPGKPPVYPVGPLVKTGSTAESKNEGCLKWLDDQPLGSVLFVSFGSGGTL--SCEQLNELALGLEMSEQRF 303 (482)
Q Consensus 226 ~~~~~~~~~~p~~p~~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~--~~~~~~~~~~al~~~~~~~ 303 (482)
. ..... .+.++ |. ..+..+.+|+...+++++|||++||+... ..+.+..++++++..+.++
T Consensus 204 ------~-~~~~~-~~~~~-~~--------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~ 266 (398)
T 3oti_A 204 ------A-EPEGW-FMRWV-PY--------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADF 266 (398)
T ss_dssp ------S-CCCSB-CCCCC-CC--------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEE
T ss_pred ------C-CCCCC-Ccccc-CC--------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEE
Confidence 0 00011 11111 00 11234456776666778999999998442 5677888999999889899
Q ss_pred EEEEeCCCCCCCCcccccCCCCCCCCCCchhHHhhhcCCCeeeccccchhhhhhcccccccccccCchhHHHHhhcCCcE
Q 045267 304 LWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWAPQAQVLSHGSTGGFLCHCGWNSVLESVVNGVPL 383 (482)
Q Consensus 304 i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ipq~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~ 383 (482)
+|+.++... .....+ ++|+++.+|+|+.++|++++ +||||||.||+.||+++|+|+
T Consensus 267 v~~~g~~~~-------------~~l~~~---------~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Eal~~G~P~ 322 (398)
T 3oti_A 267 VLALGDLDI-------------SPLGTL---------PRNVRAVGWTPLHTLLRTCT--AVVHHGGGGTVMTAIDAGIPQ 322 (398)
T ss_dssp EEECTTSCC-------------GGGCSC---------CTTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHHTCCE
T ss_pred EEEECCcCh-------------hhhccC---------CCcEEEEccCCHHHHHhhCC--EEEECCCHHHHHHHHHhCCCE
Confidence 998876421 111222 35899999999999999999 999999999999999999999
Q ss_pred eeccccccchhhH--HHHHhhcceeeeeccCCCCccCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcCCchHH
Q 045267 384 IAWPLYAEQKMNA--VILTEDVKLALRPKANENGIVGRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTK 461 (482)
Q Consensus 384 v~~P~~~DQ~~na--~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~ 461 (482)
|++|...||..|| .++++ .|+|+.++..+ ++++.|+ ++++|+ +++++++++++++.+ ..+..+
T Consensus 323 v~~p~~~dq~~~a~~~~~~~-~g~g~~~~~~~---~~~~~l~----~ll~~~---~~~~~~~~~~~~~~~----~~~~~~ 387 (398)
T 3oti_A 323 LLAPDPRDQFQHTAREAVSR-RGIGLVSTSDK---VDADLLR----RLIGDE---SLRTAAREVREEMVA----LPTPAE 387 (398)
T ss_dssp EECCCTTCCSSCTTHHHHHH-HTSEEECCGGG---CCHHHHH----HHHHCH---HHHHHHHHHHHHHHT----SCCHHH
T ss_pred EEcCCCchhHHHHHHHHHHH-CCCEEeeCCCC---CCHHHHH----HHHcCH---HHHHHHHHHHHHHHh----CCCHHH
Confidence 9999999999999 99999 99999998877 8888887 788887 999999999999984 566667
Q ss_pred HHHHHHHH
Q 045267 462 ALSQLASK 469 (482)
Q Consensus 462 ~~~~~~~~ 469 (482)
.++.|.+.
T Consensus 388 ~~~~l~~l 395 (398)
T 3oti_A 388 TVRRIVER 395 (398)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77766554
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=1.6e-33 Score=283.08 Aligned_cols=359 Identities=14% Similarity=0.124 Sum_probs=232.0
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEe-cCCC--CC-----CC-
Q 045267 10 APHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFL-PVSL--ND-----VA- 80 (482)
Q Consensus 10 ~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~--~~-----~~- 80 (482)
+|||+|++.++.||++|++.|+++|.++ ||+|++++++. ...... ..|+.+..+ .... .. .+
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~-GheV~v~~~~~------~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~ 71 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQAS-GHEVLIAAPPE------LQATAH--GAGLTTAGIRGNDRTGDTGGTTQLRF 71 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHT-TCEEEEEECHH------HHHHHH--HBTCEEEEC--------------CCS
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHC-CCEEEEecChh------hHHHHH--hCCCceeeecCCccchhhhhhhcccc
Confidence 4789999999999999999999999988 99999999752 222222 235676666 2111 00 00
Q ss_pred -cch---hhHHHHHHHHHhhhHHH-------HHHHHHHhhCCCccEEEeCCCCccHHHHHHHcCCccEEEccchHHHHHH
Q 045267 81 -EDA---RAETVISLTVLRSLPCL-------RQELTSLVAKATVAALVVDLFGTDAFDVAQEFNISPYIFYPSTAMCLSL 149 (482)
Q Consensus 81 -~~~---~~~~~~~~~~~~~~~~l-------~~~l~~~~~~~~pD~vi~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~ 149 (482)
... .....+..........+ ...+.+++++++||+||+|...+++..+|+.+|||++.+.......
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~--- 148 (391)
T 3tsa_A 72 PNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAWRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPT--- 148 (391)
T ss_dssp CCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCT---
T ss_pred cccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhcCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccc---
Confidence 000 00011111111111122 3344555566799999999877778889999999988765432110
Q ss_pred HhhhhhhhccCCCCCcccCCCCcccCCCCCccccCCCCcccccccchHHHHHHHHHhhc--ccccEEEEcCccccchhHH
Q 045267 150 FLHLEKLDQMVPRDCEYRDMSEPVQIPGCIPVHGGYLLDPVQDRKNEAYRWVLHHAKRY--KLAEGIIVNSFTDLEGGAL 227 (482)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~l~~~~~ 227 (482)
. ..+......+.......+... ...+..+.....+++...
T Consensus 149 --------------------------~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 190 (391)
T 3tsa_A 149 --------------------------A-----------GPFSDRAHELLDPVCRHHGLTGLPTPELILDPCPPSLQASD- 190 (391)
T ss_dssp --------------------------T-----------THHHHHHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCTT-
T ss_pred --------------------------c-----------ccccchHHHHHHHHHHHcCCCCCCCCceEEEecChhhcCCC-
Confidence 0 000000011111111111110 111333333333332210
Q ss_pred HHhhhcCCCCCCCeEeeccCcCCCCCCccccccccccccCCCCCcEEEEeccCCCC---CCHHHHHHHHHHHHhc-CCce
Q 045267 228 KALQHQDEPGKPPVYPVGPLVKTGSTAESKNEGCLKWLDDQPLGSVLFVSFGSGGT---LSCEQLNELALGLEMS-EQRF 303 (482)
Q Consensus 228 ~~~~~~~~p~~p~~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~---~~~~~~~~~~~al~~~-~~~~ 303 (482)
. .... .+.++ |. ..+.....|+...+++++|++++||... ...+.+..++++ +.. +.++
T Consensus 191 ----~--~~~~-~~~~~-p~--------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~ 253 (391)
T 3tsa_A 191 ----A--PQGA-PVQYV-PY--------NGSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEA 253 (391)
T ss_dssp ----S--CCCE-ECCCC-CC--------CCCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEE
T ss_pred ----C--CccC-Ceeee-cC--------CCCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEE
Confidence 0 0000 11222 11 1123344677666667899999999732 236778888888 877 6688
Q ss_pred EEEEeCCCCCCCCcccccCCCCCCCCCCchhHHhhhcCCCeeeccccchhhhhhcccccccccccCchhHHHHhhcCCcE
Q 045267 304 LWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWAPQAQVLSHGSTGGFLCHCGWNSVLESVVNGVPL 383 (482)
Q Consensus 304 i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ipq~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~ 383 (482)
+|+.++... +.... .++|+.+.+|+|+.++|++++ +||||||.||+.||+++|+|+
T Consensus 254 v~~~~~~~~-------------~~l~~---------~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~ 309 (391)
T 3tsa_A 254 VIAVPPEHR-------------ALLTD---------LPDNARIAESVPLNLFLRTCE--LVICAGGSGTAFTATRLGIPQ 309 (391)
T ss_dssp EEECCGGGG-------------GGCTT---------CCTTEEECCSCCGGGTGGGCS--EEEECCCHHHHHHHHHTTCCE
T ss_pred EEEECCcch-------------hhccc---------CCCCEEEeccCCHHHHHhhCC--EEEeCCCHHHHHHHHHhCCCE
Confidence 887765321 11111 235899999999999999999 999999999999999999999
Q ss_pred eeccccccchhhHHHHHhhcceeeeecc--CCCCccCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcCCchHH
Q 045267 384 IAWPLYAEQKMNAVILTEDVKLALRPKA--NENGIVGRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTK 461 (482)
Q Consensus 384 v~~P~~~DQ~~na~rv~~~~G~G~~l~~--~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~ 461 (482)
|++|...||+.|+.++++ .|+|..+.. ++ .+++.|.+++.++|+|+ +++++++++++++.+ .++..+
T Consensus 310 v~~p~~~~q~~~a~~~~~-~g~g~~~~~~~~~---~~~~~l~~ai~~ll~~~---~~~~~~~~~~~~~~~----~~~~~~ 378 (391)
T 3tsa_A 310 LVLPQYFDQFDYARNLAA-AGAGICLPDEQAQ---SDHEQFTDSIATVLGDT---GFAAAAIKLSDEITA----MPHPAA 378 (391)
T ss_dssp EECCCSTTHHHHHHHHHH-TTSEEECCSHHHH---TCHHHHHHHHHHHHTCT---HHHHHHHHHHHHHHT----SCCHHH
T ss_pred EecCCcccHHHHHHHHHH-cCCEEecCccccc---CCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHc----CCCHHH
Confidence 999999999999999999 999999988 66 89999999999999998 999999999999874 667777
Q ss_pred HHHHHHHHH
Q 045267 462 ALSQLASKW 470 (482)
Q Consensus 462 ~~~~~~~~~ 470 (482)
+++.+.+.+
T Consensus 379 ~~~~i~~~~ 387 (391)
T 3tsa_A 379 LVRTLENTA 387 (391)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHHHH
Confidence 777765543
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=3.9e-31 Score=267.42 Aligned_cols=365 Identities=15% Similarity=0.157 Sum_probs=239.3
Q ss_pred cCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEecCC-------------
Q 045267 9 AAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLPVS------------- 75 (482)
Q Consensus 9 ~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------------- 75 (482)
.+|||+|++.++.||++|++.|+++|+++ ||+|++++++.. ..... ..|+.+..++..
T Consensus 19 ~~MrIl~~~~~~~Gh~~~~~~la~~L~~~-GheV~v~~~~~~------~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~ 89 (412)
T 3otg_A 19 RHMRVLFASLGTHGHTYPLLPLATAARAA-GHEVTFATGEGF------AGTLR--KLGFEPVATGMPVFDGFLAALRIRF 89 (412)
T ss_dssp CSCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEECGGG------HHHHH--HTTCEEEECCCCHHHHHHHHHHHHH
T ss_pred ceeEEEEEcCCCcccHHHHHHHHHHHHHC-CCEEEEEccHHH------HHHHH--hcCCceeecCcccccchhhhhhhhh
Confidence 46899999999999999999999999988 999999998632 22222 236777766530
Q ss_pred -CCCCCc--chhhHHHHHHHHHhh-hHHHHHHHHHHhhCCCccEEEeCCCCccHHHHHHHcCCccEEEccchHHHHHHHh
Q 045267 76 -LNDVAE--DARAETVISLTVLRS-LPCLRQELTSLVAKATVAALVVDLFGTDAFDVAQEFNISPYIFYPSTAMCLSLFL 151 (482)
Q Consensus 76 -~~~~~~--~~~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~pD~vi~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~ 151 (482)
....+. .......+...+... .......+.+++++++||+||+|...+++..+|+.+|||++.+.......
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~----- 164 (412)
T 3otg_A 90 DTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTP----- 164 (412)
T ss_dssp SCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCC-----
T ss_pred cccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhHHHHHHHHcCCCEEEecccccCc-----
Confidence 000000 011111111111111 12222334444555699999999877777889999999988754432110
Q ss_pred hhhhhhccCCCCCcccCCCCcccCCCCCccccCCCCcccccccchHHHHHHHHHhh-------cccccEEEEcCccccch
Q 045267 152 HLEKLDQMVPRDCEYRDMSEPVQIPGCIPVHGGYLLDPVQDRKNEAYRWVLHHAKR-------YKLAEGIIVNSFTDLEG 224 (482)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~s~~~l~~ 224 (482)
++ ...+....+..+...... ....+.++..+...++.
T Consensus 165 ------------------------~~------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~ 208 (412)
T 3otg_A 165 ------------------------DD------------LTRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQE 208 (412)
T ss_dssp ------------------------SH------------HHHHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSC
T ss_pred ------------------------hh------------hhHHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcC
Confidence 00 000000011111111100 11223344444333332
Q ss_pred hHHHHhhhcCCCCCCCeEeeccCcCCCCCCcccccccccc-ccCCCCCcEEEEeccCCCCCCHHHHHHHHHHHHhcCCce
Q 045267 225 GALKALQHQDEPGKPPVYPVGPLVKTGSTAESKNEGCLKW-LDDQPLGSVLFVSFGSGGTLSCEQLNELALGLEMSEQRF 303 (482)
Q Consensus 225 ~~~~~~~~~~~p~~p~~~~vGp~~~~~~~~~~~~~~~~~~-l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~ 303 (482)
... .+... .. .+.++++- ......+| ....+++++|++++||......+.+..++++++..+.++
T Consensus 209 ~~~-~~~~~---~~-~~~~~~~~---------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~~~ 274 (412)
T 3otg_A 209 PEF-RARPR---RH-ELRPVPFA---------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDADV 274 (412)
T ss_dssp HHH-HTCTT---EE-ECCCCCCC---------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHHTSSSEE
T ss_pred Ccc-cCCCC---cc-eeeccCCC---------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHHcCCCEE
Confidence 211 00000 00 01111111 12233455 233345679999999987667788888999999888899
Q ss_pred EEEEeCCCCCCCCcccccCCCCCCCCCCchhHHhhhcCCCeeeccccchhhhhhcccccccccccCchhHHHHhhcCCcE
Q 045267 304 LWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWAPQAQVLSHGSTGGFLCHCGWNSVLESVVNGVPL 383 (482)
Q Consensus 304 i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ipq~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~ 383 (482)
+|+.+.+... +....++ +|+.+.+|+|+.++|++++ +||+|||+||+.||+++|+|+
T Consensus 275 ~~~~g~~~~~------------~~l~~~~---------~~v~~~~~~~~~~~l~~ad--~~v~~~g~~t~~Ea~a~G~P~ 331 (412)
T 3otg_A 275 LVASGPSLDV------------SGLGEVP---------ANVRLESWVPQAALLPHVD--LVVHHGGSGTTLGALGAGVPQ 331 (412)
T ss_dssp EEECCSSCCC------------TTCCCCC---------TTEEEESCCCHHHHGGGCS--EEEESCCHHHHHHHHHHTCCE
T ss_pred EEEECCCCCh------------hhhccCC---------CcEEEeCCCCHHHHHhcCc--EEEECCchHHHHHHHHhCCCE
Confidence 9888764311 1222233 4888999999999999999 999999999999999999999
Q ss_pred eeccccccchhhHHHHHhhcceeeeeccCCCCccCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcCCchHHHH
Q 045267 384 IAWPLYAEQKMNAVILTEDVKLALRPKANENGIVGRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTKAL 463 (482)
Q Consensus 384 v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~ 463 (482)
|++|...||..|+.++++ .|+|..+...+ ++++.|+++|.++++|+ ++++++.+.++++.+ ..+..+.+
T Consensus 332 v~~p~~~~q~~~~~~v~~-~g~g~~~~~~~---~~~~~l~~ai~~ll~~~---~~~~~~~~~~~~~~~----~~~~~~~~ 400 (412)
T 3otg_A 332 LSFPWAGDSFANAQAVAQ-AGAGDHLLPDN---ISPDSVSGAAKRLLAEE---SYRAGARAVAAEIAA----MPGPDEVV 400 (412)
T ss_dssp EECCCSTTHHHHHHHHHH-HTSEEECCGGG---CCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHH----SCCHHHHH
T ss_pred EecCCchhHHHHHHHHHH-cCCEEecCccc---CCHHHHHHHHHHHHhCH---HHHHHHHHHHHHHhc----CCCHHHHH
Confidence 999999999999999999 99999999877 89999999999999997 899999999988875 56777877
Q ss_pred HHHHHHHh
Q 045267 464 SQLASKWN 471 (482)
Q Consensus 464 ~~~~~~~~ 471 (482)
+.+.+.+.
T Consensus 401 ~~~~~l~~ 408 (412)
T 3otg_A 401 RLLPGFAS 408 (412)
T ss_dssp TTHHHHHC
T ss_pred HHHHHHhc
Confidence 77776654
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.96 E-value=6.2e-28 Score=239.89 Aligned_cols=343 Identities=15% Similarity=0.105 Sum_probs=203.9
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEecC-CCCCCCcchhhHHHH
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLPV-SLNDVAEDARAETVI 89 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~ 89 (482)
+||+|...|+.||++|.++||++|.++ ||+|+|++.+...+ ..+.. ..++.+..++. ...... ........
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~-g~~V~~vg~~~g~e----~~~v~--~~g~~~~~i~~~~~~~~~-~~~~~~~~ 74 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQAR-GYAVHWLGTPRGIE----NDLVP--KAGLPLHLIQVSGLRGKG-LKSLVKAP 74 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEECSSSTH----HHHTG--GGTCCEEECC---------------CH
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhC-CCEEEEEECCchHh----hchhh--hcCCcEEEEECCCcCCCC-HHHHHHHH
Confidence 379999999899999999999999998 99999998764332 11222 23678887772 211100 01111111
Q ss_pred HHHHHhhhHHHHHHHHHHhhCCCccEEEeCCCCccH--HHHHHHcCCccEEEccchHHHHHHHhhhhhhhccCCCCCccc
Q 045267 90 SLTVLRSLPCLRQELTSLVAKATVAALVVDLFGTDA--FDVAQEFNISPYIFYPSTAMCLSLFLHLEKLDQMVPRDCEYR 167 (482)
Q Consensus 90 ~~~~~~~~~~l~~~l~~~~~~~~pD~vi~D~~~~~~--~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (482)
...+ ........ ++++.+||+||++..+... ..+|+.+|||+++.- ...
T Consensus 75 ~~~~-~~~~~~~~----~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe------------------~n~------ 125 (365)
T 3s2u_A 75 LELL-KSLFQALR----VIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIHE------------------QNA------ 125 (365)
T ss_dssp HHHH-HHHHHHHH----HHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEEEE------------------CSS------
T ss_pred HHHH-HHHHHHHH----HHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEEEe------------------cch------
Confidence 1111 11122223 3445599999999755543 468899999987521 111
Q ss_pred CCCCcccCCCCCccccCCCCcccccccchHHHHHHHHHhhcccccEEEEcCccccchhHHHHhhhcCCCCCCCeEeeccC
Q 045267 168 DMSEPVQIPGCIPVHGGYLLDPVQDRKNEAYRWVLHHAKRYKLAEGIIVNSFTDLEGGALKALQHQDEPGKPPVYPVGPL 247 (482)
Q Consensus 168 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~p~~p~~~~vGp~ 247 (482)
+||+ .+++. .+.++.+. .++++. .+...+.+++|+.
T Consensus 126 -------~~G~-------------------~nr~l-----~~~a~~v~-~~~~~~------------~~~~~k~~~~g~p 161 (365)
T 3s2u_A 126 -------VAGT-------------------ANRSL-----APIARRVC-EAFPDT------------FPASDKRLTTGNP 161 (365)
T ss_dssp -------SCCH-------------------HHHHH-----GGGCSEEE-ESSTTS------------SCC---CEECCCC
T ss_pred -------hhhh-------------------HHHhh-----ccccceee-eccccc------------ccCcCcEEEECCC
Confidence 2331 11111 11122232 222221 1122467778865
Q ss_pred cCCCCCCccccccccccccCCCCCcEEEEeccCCCCCCHHHHHHHHHHHHhcC----CceEEEEeCCCCCCCCcccccCC
Q 045267 248 VKTGSTAESKNEGCLKWLDDQPLGSVLFVSFGSGGTLSCEQLNELALGLEMSE----QRFLWVVRSPNNAANSTFFSVNS 323 (482)
Q Consensus 248 ~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~----~~~i~~~~~~~~~~~~~~~~~~~ 323 (482)
+....... . .......++++.|+|..||.... ...+.+.++++.+. ..++|+.+...
T Consensus 162 vr~~~~~~---~--~~~~~~~~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi~~~G~~~------------ 222 (365)
T 3s2u_A 162 VRGELFLD---A--HARAPLTGRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIRHQAGRQH------------ 222 (365)
T ss_dssp CCGGGCCC---T--TSSCCCTTSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEEEECCTTT------------
T ss_pred Cchhhccc---h--hhhcccCCCCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEEEecCccc------------
Confidence 54322110 0 11112223456899999986543 33344666776553 34555554321
Q ss_pred CCCCCCCCchhHHhhh--cCCCeeeccccch-hhhhhcccccccccccCchhHHHHhhcCCcEeecccc----ccchhhH
Q 045267 324 HKDPYDFLPKGFLDRT--KGRGMLVPSWAPQ-AQVLSHGSTGGFLCHCGWNSVLESVVNGVPLIAWPLY----AEQKMNA 396 (482)
Q Consensus 324 ~~~~~~~lp~~~~~~~--~~~~v~~~~~ipq-~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~----~DQ~~na 396 (482)
.+...+.. .+.++.+.+|+++ .++|..+| ++|||+|.+|+.|++++|+|+|++|+. .+|..||
T Consensus 223 --------~~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aD--lvI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA 292 (365)
T 3s2u_A 223 --------AEITAERYRTVAVEADVAPFISDMAAAYAWAD--LVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNA 292 (365)
T ss_dssp --------HHHHHHHHHHTTCCCEEESCCSCHHHHHHHCS--EEEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHH
T ss_pred --------cccccceecccccccccccchhhhhhhhccce--EEEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHH
Confidence 12222222 3457888899996 57999999 999999999999999999999999973 5899999
Q ss_pred HHHHhhcceeeeeccCCCCccCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHhhcc
Q 045267 397 VILTEDVKLALRPKANENGIVGRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQLASKWNNNE 474 (482)
Q Consensus 397 ~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~~ 474 (482)
+.+++ .|+|..++.++ +|++.|.++|.+++.|+ +.+++ |++.+++ .....+.++.++.+.+-.+.++
T Consensus 293 ~~l~~-~G~a~~l~~~~---~~~~~L~~~i~~ll~d~---~~~~~---m~~~a~~-~~~~~aa~~ia~~i~~larG~e 359 (365)
T 3s2u_A 293 EFLVR-SGAGRLLPQKS---TGAAELAAQLSEVLMHP---ETLRS---MADQARS-LAKPEATRTVVDACLEVARGLE 359 (365)
T ss_dssp HHHHT-TTSEEECCTTT---CCHHHHHHHHHHHHHCT---HHHHH---HHHHHHH-TCCTTHHHHHHHHHHHHC----
T ss_pred HHHHH-CCCEEEeecCC---CCHHHHHHHHHHHHCCH---HHHHH---HHHHHHh-cCCccHHHHHHHHHHHHHccch
Confidence 99999 99999999888 99999999999999998 33322 2333322 1134455566666555444443
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.94 E-value=1.1e-26 Score=205.42 Aligned_cols=162 Identities=21% Similarity=0.368 Sum_probs=138.5
Q ss_pred ccccccccccccCCCCCcEEEEeccCCC-CCCHHHHHHHHHHHHhcCCceEEEEeCCCCCCCCcccccCCCCCCCCCCch
Q 045267 255 ESKNEGCLKWLDDQPLGSVLFVSFGSGG-TLSCEQLNELALGLEMSEQRFLWVVRSPNNAANSTFFSVNSHKDPYDFLPK 333 (482)
Q Consensus 255 ~~~~~~~~~~l~~~~~~~~v~vs~GS~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~ 333 (482)
+++++++.+|++..+++++|||++||.. ....+.+..++++++..+.+++|+.+.... ..++
T Consensus 5 ~~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~----------------~~~~- 67 (170)
T 2o6l_A 5 KPLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKP----------------DTLG- 67 (170)
T ss_dssp CCCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCC----------------TTCC-
T ss_pred CCCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCc----------------ccCC-
Confidence 3567889999987777789999999985 456778889999999888999999865321 1223
Q ss_pred hHHhhhcCCCeeeccccchhhhh--hcccccccccccCchhHHHHhhcCCcEeeccccccchhhHHHHHhhcceeeeecc
Q 045267 334 GFLDRTKGRGMLVPSWAPQAQVL--SHGSTGGFLCHCGWNSVLESVVNGVPLIAWPLYAEQKMNAVILTEDVKLALRPKA 411 (482)
Q Consensus 334 ~~~~~~~~~~v~~~~~ipq~~lL--~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~ 411 (482)
.|+.+.+|+||.+++ +.++ +||||||+||+.||+++|+|+|++|...||..||.++++ .|+|+.++.
T Consensus 68 --------~~v~~~~~~~~~~~l~~~~ad--~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~ 136 (170)
T 2o6l_A 68 --------LNTRLYKWIPQNDLLGHPKTR--AFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDF 136 (170)
T ss_dssp --------TTEEEESSCCHHHHHTSTTEE--EEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCT
T ss_pred --------CcEEEecCCCHHHHhcCCCcC--EEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEecc
Confidence 488899999999999 5566 999999999999999999999999999999999999999 999999988
Q ss_pred CCCCccCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Q 045267 412 NENGIVGRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAA 450 (482)
Q Consensus 412 ~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~ 450 (482)
++ ++++.|.++|.+++.|+ +|+++++++++.++
T Consensus 137 ~~---~~~~~l~~~i~~ll~~~---~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 137 NT---MSSTDLLNALKRVINDP---SYKENVMKLSRIQH 169 (170)
T ss_dssp TT---CCHHHHHHHHHHHHHCH---HHHHHHHHHC----
T ss_pred cc---CCHHHHHHHHHHHHcCH---HHHHHHHHHHHHhh
Confidence 77 99999999999999987 89999999998876
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.83 E-value=7.5e-19 Score=174.09 Aligned_cols=339 Identities=14% Similarity=0.073 Sum_probs=203.9
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEecC-CCCCCCcchhhHHHH
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLPV-SLNDVAEDARAETVI 89 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~ 89 (482)
|||++++.+..||..+++.|+++|.++ ||+|++++...... ..... ..++.+..++. ..... .........
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~-G~~V~v~~~~~~~~----~~~~~--~~g~~~~~~~~~~~~~~-~~~~~~~~~ 78 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQ-GWQVRWLGTADRME----ADLVP--KHGIEIDFIRISGLRGK-GIKALIAAP 78 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTT-TCEEEEEECTTSTH----HHHGG--GGTCEEEECCCCCCTTC-CHHHHHTCH
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHc-CCEEEEEecCCcch----hhhcc--ccCCceEEecCCccCcC-ccHHHHHHH
Confidence 789999988789999999999999887 99999999764211 11111 12677776662 21110 001111111
Q ss_pred HHHHHhhhHHHHHHHHHHhhCCCccEEEeCCCC--ccHHHHHHHcCCccEEEccchHHHHHHHhhhhhhhccCCCCCccc
Q 045267 90 SLTVLRSLPCLRQELTSLVAKATVAALVVDLFG--TDAFDVAQEFNISPYIFYPSTAMCLSLFLHLEKLDQMVPRDCEYR 167 (482)
Q Consensus 90 ~~~~~~~~~~l~~~l~~~~~~~~pD~vi~D~~~--~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (482)
... ......+. +++++.+||+|+++... ..+..+++.+|+|++......
T Consensus 79 ~~~-~~~~~~l~----~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~------------------------ 129 (364)
T 1f0k_A 79 LRI-FNAWRQAR----AIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG------------------------ 129 (364)
T ss_dssp HHH-HHHHHHHH----HHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS------------------------
T ss_pred HHH-HHHHHHHH----HHHHhcCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC------------------------
Confidence 111 11122233 33445599999998643 234567888999987532210
Q ss_pred CCCCcccCCCCCccccCCCCcccccccchHHHHHHHHHhhcccccEEEEcCccccchhHHHHhhhcCCCCCCCeEeeccC
Q 045267 168 DMSEPVQIPGCIPVHGGYLLDPVQDRKNEAYRWVLHHAKRYKLAEGIIVNSFTDLEGGALKALQHQDEPGKPPVYPVGPL 247 (482)
Q Consensus 168 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~p~~p~~~~vGp~ 247 (482)
.++. ...+ ..+..+.++..+... .|++.++|..
T Consensus 130 -------~~~~-------------------~~~~-----~~~~~d~v~~~~~~~----------------~~~~~~i~n~ 162 (364)
T 1f0k_A 130 -------IAGL-------------------TNKW-----LAKIATKVMQAFPGA----------------FPNAEVVGNP 162 (364)
T ss_dssp -------SCCH-------------------HHHH-----HTTTCSEEEESSTTS----------------SSSCEECCCC
T ss_pred -------CCcH-------------------HHHH-----HHHhCCEEEecChhh----------------cCCceEeCCc
Confidence 0110 0010 112334444433211 1245566543
Q ss_pred cCCCCCCccccccccccccCCCCCcEEEEeccCCCCCCHHHHHHHHHHHHhcC--CceEEEEeCCCCCCCCcccccCCCC
Q 045267 248 VKTGSTAESKNEGCLKWLDDQPLGSVLFVSFGSGGTLSCEQLNELALGLEMSE--QRFLWVVRSPNNAANSTFFSVNSHK 325 (482)
Q Consensus 248 ~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~ 325 (482)
+..... ..+. ....+...++++++++..|+... ......++++++.+. .++++..+.+.
T Consensus 163 v~~~~~--~~~~-~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~-------------- 223 (364)
T 1f0k_A 163 VRTDVL--ALPL-PQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGS-------------- 223 (364)
T ss_dssp CCHHHH--TSCC-HHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTC--------------
T ss_pred cchhhc--ccch-hhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCch--------------
Confidence 321100 0000 01111122234578888887642 444555667776553 44455555421
Q ss_pred CCCCCCchhHHhhh---cCCCeeeccccc-hhhhhhcccccccccccCchhHHHHhhcCCcEeecccc---ccchhhHHH
Q 045267 326 DPYDFLPKGFLDRT---KGRGMLVPSWAP-QAQVLSHGSTGGFLCHCGWNSVLESVVNGVPLIAWPLY---AEQKMNAVI 398 (482)
Q Consensus 326 ~~~~~lp~~~~~~~---~~~~v~~~~~ip-q~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~---~DQ~~na~r 398 (482)
.+.+.+.. .-.++.+.+|++ ...++..++ ++|+++|.+++.||+++|+|+|+.|.. .||..|+..
T Consensus 224 ------~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad--~~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~ 295 (364)
T 1f0k_A 224 ------QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWAD--VVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALP 295 (364)
T ss_dssp ------HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCS--EEEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHH
T ss_pred ------HHHHHHHHhhcCCCceEEecchhhHHHHHHhCC--EEEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHH
Confidence 12333222 225799999995 478999999 999999999999999999999999987 799999999
Q ss_pred HHhhcceeeeeccCCCCccCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHhhc
Q 045267 399 LTEDVKLALRPKANENGIVGRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQLASKWNNN 473 (482)
Q Consensus 399 v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~ 473 (482)
+.+ .|.|..++..+ +++++|+++|.++ |+ +.+++..+-+.+.. +..+.++.++++.+.+++.
T Consensus 296 ~~~-~g~g~~~~~~d---~~~~~la~~i~~l--~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~y~~~ 357 (364)
T 1f0k_A 296 LEK-AGAAKIIEQPQ---LSVDAVANTLAGW--SR---ETLLTMAERARAAS----IPDATERVANEVSRVARAL 357 (364)
T ss_dssp HHH-TTSEEECCGGG---CCHHHHHHHHHTC--CH---HHHHHHHHHHHHTC----CTTHHHHHHHHHHHHHTTC
T ss_pred HHh-CCcEEEecccc---CCHHHHHHHHHhc--CH---HHHHHHHHHHHHhh----ccCHHHHHHHHHHHHHHHH
Confidence 999 89999998776 7899999999988 65 55544444333332 3567777777777766553
No 23
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.58 E-value=2.7e-15 Score=136.22 Aligned_cols=136 Identities=14% Similarity=0.112 Sum_probs=95.1
Q ss_pred CCCcEEEEeccCCCCCCHHHHHHH-----HHHHHhcC-CceEEEEeCCCCCCCCcccccCCCCCCCCC------------
Q 045267 269 PLGSVLFVSFGSGGTLSCEQLNEL-----ALGLEMSE-QRFLWVVRSPNNAANSTFFSVNSHKDPYDF------------ 330 (482)
Q Consensus 269 ~~~~~v~vs~GS~~~~~~~~~~~~-----~~al~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 330 (482)
+++++|||+.||... -.+.+..+ +++|...+ .+++++++..... ....
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~-------------~~~~~~~~~~~~~~~~ 91 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSS-------------EFEHLVQERGGQRESQ 91 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCC-------------CCCSHHHHHTCEECSC
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchh-------------hHHHHHHhhhcccccc
Confidence 446799999999732 23333333 48887777 6888888864320 0000
Q ss_pred -CchhH------Hh----hhcCCCeeeccccchh-hhhh-cccccccccccCchhHHHHhhcCCcEeecccc----ccch
Q 045267 331 -LPKGF------LD----RTKGRGMLVPSWAPQA-QVLS-HGSTGGFLCHCGWNSVLESVVNGVPLIAWPLY----AEQK 393 (482)
Q Consensus 331 -lp~~~------~~----~~~~~~v~~~~~ipq~-~lL~-~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~----~DQ~ 393 (482)
+|.+. .+ ....-++.+.+|+++. ++|+ .++ ++|||||+||++|++++|+|+|++|.. .||.
T Consensus 92 l~p~~~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Ad--lvIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~ 169 (224)
T 2jzc_A 92 KIPIDQFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSD--LVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQ 169 (224)
T ss_dssp CCSSCTTCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCS--CEEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHH
T ss_pred ccccccccccccccccccccCCceEEEeeccchHHHHHHhcCC--EEEECCcHHHHHHHHHhCCCEEEEcCcccccchHH
Confidence 11000 00 0011245677888864 8999 999 999999999999999999999999974 4699
Q ss_pred hhHHHHHhhcceeeeeccCCCCccCHHHHHHHHHHH
Q 045267 394 MNAVILTEDVKLALRPKANENGIVGRDEIAKVVKAL 429 (482)
Q Consensus 394 ~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~v 429 (482)
.||+++++ .|+|+.+ +++.|+++|.++
T Consensus 170 ~nA~~l~~-~G~~~~~--------~~~~L~~~i~~l 196 (224)
T 2jzc_A 170 QIADKFVE-LGYVWSC--------APTETGLIAGLR 196 (224)
T ss_dssp HHHHHHHH-HSCCCEE--------CSCTTTHHHHHH
T ss_pred HHHHHHHH-CCCEEEc--------CHHHHHHHHHHH
Confidence 99999999 9998765 345677777776
No 24
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.54 E-value=4e-13 Score=127.07 Aligned_cols=117 Identities=12% Similarity=0.030 Sum_probs=89.0
Q ss_pred CcEEEEeccCCCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCCCCCcccccCCCCCCCCCCchhHHhhh-cCCCeeeccc
Q 045267 271 GSVLFVSFGSGGTLSCEQLNELALGLEMSEQRFLWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFLDRT-KGRGMLVPSW 349 (482)
Q Consensus 271 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~~v~~~~~ 349 (482)
.+.|+|++|... .......++++++... ++.++.+.+.. ..+.+.+.. ..+|+.+..|
T Consensus 157 ~~~ILv~~GG~d--~~~l~~~vl~~L~~~~-~i~vv~G~~~~------------------~~~~l~~~~~~~~~v~v~~~ 215 (282)
T 3hbm_A 157 KYDFFICMGGTD--IKNLSLQIASELPKTK-IISIATSSSNP------------------NLKKLQKFAKLHNNIRLFID 215 (282)
T ss_dssp CEEEEEECCSCC--TTCHHHHHHHHSCTTS-CEEEEECTTCT------------------THHHHHHHHHTCSSEEEEES
T ss_pred CCeEEEEECCCc--hhhHHHHHHHHhhcCC-CEEEEECCCch------------------HHHHHHHHHhhCCCEEEEeC
Confidence 458999999643 2335566788876544 45566654321 113333322 2358999999
Q ss_pred cchh-hhhhcccccccccccCchhHHHHhhcCCcEeeccccccchhhHHHHHhhcceeeeeccC
Q 045267 350 APQA-QVLSHGSTGGFLCHCGWNSVLESVVNGVPLIAWPLYAEQKMNAVILTEDVKLALRPKAN 412 (482)
Q Consensus 350 ipq~-~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~ 412 (482)
+++. +++..++ ++|++|| +|+.|+++.|+|+|++|...+|..||..+++ .|++..+..-
T Consensus 216 ~~~m~~~m~~aD--lvI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~-~G~~~~~~~~ 275 (282)
T 3hbm_A 216 HENIAKLMNESN--KLIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAK-KGYEVEYKYL 275 (282)
T ss_dssp CSCHHHHHHTEE--EEEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHH-TTCEEECGGG
T ss_pred HHHHHHHHHHCC--EEEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHH-CCCEEEcchh
Confidence 9864 6999999 9999999 8999999999999999999999999999999 9999988754
No 25
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.32 E-value=9.8e-12 Score=123.32 Aligned_cols=108 Identities=16% Similarity=0.184 Sum_probs=74.8
Q ss_pred CCeeeccccch---hhhhhcccccccccccCchhHHHHhhcCCcEeeccccccchhhHHHHHhhcceeeeeccCCCCccC
Q 045267 342 RGMLVPSWAPQ---AQVLSHGSTGGFLCHCGWNSVLESVVNGVPLIAWPLYAEQKMNAVILTEDVKLALRPKANENGIVG 418 (482)
Q Consensus 342 ~~v~~~~~ipq---~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~ 418 (482)
+++.+.+++++ ..++..++ +||+..| |.+.||+++|+|+|+.+..+++... .+ .|.|+.++ .+
T Consensus 255 ~~v~~~g~~g~~~~~~~~~~ad--~~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~----~~-~g~g~lv~------~d 320 (376)
T 1v4v_A 255 RNFVLLDPLEYGSMAALMRASL--LLVTDSG-GLQEEGAALGVPVVVLRNVTERPEG----LK-AGILKLAG------TD 320 (376)
T ss_dssp TTEEEECCCCHHHHHHHHHTEE--EEEESCH-HHHHHHHHTTCCEEECSSSCSCHHH----HH-HTSEEECC------SC
T ss_pred CCEEEECCCCHHHHHHHHHhCc--EEEECCc-CHHHHHHHcCCCEEeccCCCcchhh----hc-CCceEECC------CC
Confidence 58888866554 57899999 8998884 4466999999999999876776663 45 58887774 37
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHH
Q 045267 419 RDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQLASKW 470 (482)
Q Consensus 419 ~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~ 470 (482)
+++|++++.++++|+ +.+++..+.+ + ....++++.+.++.+.+.+
T Consensus 321 ~~~la~~i~~ll~d~---~~~~~~~~~~---~-~~~~~~~~~~i~~~i~~~~ 365 (376)
T 1v4v_A 321 PEGVYRVVKGLLENP---EELSRMRKAK---N-PYGDGKAGLMVARGVAWRL 365 (376)
T ss_dssp HHHHHHHHHHHHTCH---HHHHHHHHSC---C-SSCCSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCh---HhhhhhcccC---C-CCCCChHHHHHHHHHHHHh
Confidence 899999999999986 4443333211 1 1223455555555555443
No 26
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.32 E-value=9.7e-12 Score=124.61 Aligned_cols=110 Identities=15% Similarity=0.133 Sum_probs=78.6
Q ss_pred CCCeeeccccc---hhhhhhcccccccccccCchhHHHHhhcCCcEeeccccccchhhHHHHHhhcceeeeeccCCCCcc
Q 045267 341 GRGMLVPSWAP---QAQVLSHGSTGGFLCHCGWNSVLESVVNGVPLIAWPLYAEQKMNAVILTEDVKLALRPKANENGIV 417 (482)
Q Consensus 341 ~~~v~~~~~ip---q~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~ 417 (482)
.+++.+.++++ ...++..++ ++|+-.|. .+.||.++|+|+|++|-.++++. +.+ .|.|+.+. .
T Consensus 281 ~~~v~l~~~l~~~~~~~l~~~ad--~vv~~SGg-~~~EA~a~g~PvV~~~~~~~~~e----~v~-~g~~~lv~------~ 346 (403)
T 3ot5_A 281 HERIHLIEPLDAIDFHNFLRKSY--LVFTDSGG-VQEEAPGMGVPVLVLRDTTERPE----GIE-AGTLKLIG------T 346 (403)
T ss_dssp CTTEEEECCCCHHHHHHHHHHEE--EEEECCHH-HHHHGGGTTCCEEECCSSCSCHH----HHH-HTSEEECC------S
T ss_pred CCCEEEeCCCCHHHHHHHHHhcC--EEEECCcc-HHHHHHHhCCCEEEecCCCcchh----hee-CCcEEEcC------C
Confidence 35888888886 456888999 89988752 23699999999999976666654 245 68887765 3
Q ss_pred CHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHh
Q 045267 418 GRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQLASKWN 471 (482)
Q Consensus 418 ~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~ 471 (482)
++++|.+++.+++.|+ +.+++..+ ..+. ...++++++.++.+.+.+.
T Consensus 347 d~~~l~~ai~~ll~~~---~~~~~m~~---~~~~-~g~~~aa~rI~~~l~~~l~ 393 (403)
T 3ot5_A 347 NKENLIKEALDLLDNK---ESHDKMAQ---AANP-YGDGFAANRILAAIKSHFE 393 (403)
T ss_dssp CHHHHHHHHHHHHHCH---HHHHHHHH---SCCT-TCCSCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHcCH---HHHHHHHh---hcCc-ccCCcHHHHHHHHHHHHhC
Confidence 7899999999999886 44443332 2221 2357777777777777664
No 27
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.31 E-value=3.6e-10 Score=112.37 Aligned_cols=349 Identities=11% Similarity=0.017 Sum_probs=183.6
Q ss_pred ccCCEEEEEcC--C--CCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEecCCCCCCCcch
Q 045267 8 QAAPHIVLLPS--P--GMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLPVSLNDVAEDA 83 (482)
Q Consensus 8 ~~~~~ili~~~--~--~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 83 (482)
|++|||++++. + ..|.-.-+..|++.| + ||+|++++...... ....... ..++.+..++.... .+. .
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~-g~~v~v~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~-~~~-~ 72 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--D-PESIVVFASTQNAE--EAHAYDK--TLDYEVIRWPRSVM-LPT-P 72 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--C-GGGEEEEEECSSHH--HHHHHHT--TCSSEEEEESSSSC-CSC-H
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--c-CCeEEEEECCCCcc--chhhhcc--ccceEEEEcccccc-ccc-h
Confidence 55788999875 3 458888899999999 6 99999999764221 0011111 33567666662110 010 0
Q ss_pred hhHHHHHHHHHhhhHHHHHHHHHHhhCCCccEEEeCCCCcc--HHHHHHHcCCccEE-EccchHHHHHHHhhhhhhhccC
Q 045267 84 RAETVISLTVLRSLPCLRQELTSLVAKATVAALVVDLFGTD--AFDVAQEFNISPYI-FYPSTAMCLSLFLHLEKLDQMV 160 (482)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~pD~vi~D~~~~~--~~~~A~~lgIP~v~-~~~~~~~~~~~~~~~~~~~~~~ 160 (482)
.....+.+++++.+||+|++...... ...+++.+|+|.++ .........
T Consensus 73 ---------------~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~------------- 124 (394)
T 3okp_A 73 ---------------TTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGW------------- 124 (394)
T ss_dssp ---------------HHHHHHHHHHHHTTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHH-------------
T ss_pred ---------------hhHHHHHHHHHhcCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhh-------------
Confidence 11122334444569999998764443 34578889998443 333211100
Q ss_pred CCCCcccCCCCcccCCCCCccccCCCCcccccccchHHHHHHHHHhhcccccEEEEcCccccchhHHHHhhhcCCCCCCC
Q 045267 161 PRDCEYRDMSEPVQIPGCIPVHGGYLLDPVQDRKNEAYRWVLHHAKRYKLAEGIIVNSFTDLEGGALKALQHQDEPGKPP 240 (482)
Q Consensus 161 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~p~~p~ 240 (482)
. .....+.+.+. ..+.++.++..|-...+. +...+. ...+
T Consensus 125 ---------------~-----------------~~~~~~~~~~~--~~~~~d~ii~~s~~~~~~-~~~~~~-----~~~~ 164 (394)
T 3okp_A 125 ---------------S-----------------MLPGSRQSLRK--IGTEVDVLTYISQYTLRR-FKSAFG-----SHPT 164 (394)
T ss_dssp ---------------T-----------------TSHHHHHHHHH--HHHHCSEEEESCHHHHHH-HHHHHC-----SSSE
T ss_pred ---------------h-----------------hcchhhHHHHH--HHHhCCEEEEcCHHHHHH-HHHhcC-----CCCC
Confidence 0 00011111111 123456666665432221 111111 1125
Q ss_pred eEeeccCcCCCCCCc---cccccccccccCCCCCcEEEEeccCCCCCCHHHHHHHHHHHHhc---CCce-EEEEeCCCCC
Q 045267 241 VYPVGPLVKTGSTAE---SKNEGCLKWLDDQPLGSVLFVSFGSGGTLSCEQLNELALGLEMS---EQRF-LWVVRSPNNA 313 (482)
Q Consensus 241 ~~~vGp~~~~~~~~~---~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~---~~~~-i~~~~~~~~~ 313 (482)
+..+...+....-.. .....+.+-+.- +++..+++..|+.. ....+..++++++.+ ...+ +..++.+.
T Consensus 165 ~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~-- 239 (394)
T 3okp_A 165 FEHLPSGVDVKRFTPATPEDKSATRKKLGF-TDTTPVIACNSRLV--PRKGQDSLIKAMPQVIAARPDAQLLIVGSGR-- 239 (394)
T ss_dssp EEECCCCBCTTTSCCCCHHHHHHHHHHTTC-CTTCCEEEEESCSC--GGGCHHHHHHHHHHHHHHSTTCEEEEECCCT--
T ss_pred eEEecCCcCHHHcCCCCchhhHHHHHhcCC-CcCceEEEEEeccc--cccCHHHHHHHHHHHHhhCCCeEEEEEcCch--
Confidence 555554332221100 011111111211 12235666777752 233345555555443 2222 33333221
Q ss_pred CCCcccccCCCCCCCCCCchhHHhhh--cCCCeeeccccchhh---hhhccccccccc-----------ccCchhHHHHh
Q 045267 314 ANSTFFSVNSHKDPYDFLPKGFLDRT--KGRGMLVPSWAPQAQ---VLSHGSTGGFLC-----------HCGWNSVLESV 377 (482)
Q Consensus 314 ~~~~~~~~~~~~~~~~~lp~~~~~~~--~~~~v~~~~~ipq~~---lL~~~~~~~~I~-----------HGG~gs~~eal 377 (482)
..+.+.+.. ...++.+.+|+|+.+ ++..++ ++|. -|.-+++.||+
T Consensus 240 -----------------~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad--~~v~ps~~~~~~~~~e~~~~~~~Ea~ 300 (394)
T 3okp_A 240 -----------------YESTLRRLATDVSQNVKFLGRLEYQDMINTLAAAD--IFAMPARTRGGGLDVEGLGIVYLEAQ 300 (394)
T ss_dssp -----------------THHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCS--EEEECCCCBGGGTBCCSSCHHHHHHH
T ss_pred -----------------HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCC--EEEecCccccccccccccCcHHHHHH
Confidence 112232222 136899999998655 678888 6665 55567899999
Q ss_pred hcCCcEeeccccccchhhHHHHHhhcceeeeeccCCCCccCHHHHHHHHHHHhcCCchHHHHHH-HHHHHHHHHHHhhcC
Q 045267 378 VNGVPLIAWPLYAEQKMNAVILTEDVKLALRPKANENGIVGRDEIAKVVKALMEGEQGKEVRNK-MKDLKDAAAAVLSEN 456 (482)
Q Consensus 378 ~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~-a~~l~~~~~~a~~~~ 456 (482)
++|+|+|+.+.. .....+.+ |.|..++. -+.++++++|.+++.|+ +.+++ .++..+.++ +.
T Consensus 301 a~G~PvI~~~~~----~~~e~i~~--~~g~~~~~-----~d~~~l~~~i~~l~~~~---~~~~~~~~~~~~~~~----~~ 362 (394)
T 3okp_A 301 ACGVPVIAGTSG----GAPETVTP--ATGLVVEG-----SDVDKLSELLIELLDDP---IRRAAMGAAGRAHVE----AE 362 (394)
T ss_dssp HTTCCEEECSST----TGGGGCCT--TTEEECCT-----TCHHHHHHHHHHHHTCH---HHHHHHHHHHHHHHH----HH
T ss_pred HcCCCEEEeCCC----ChHHHHhc--CCceEeCC-----CCHHHHHHHHHHHHhCH---HHHHHHHHHHHHHHH----Hh
Confidence 999999997643 33344444 47777664 37899999999999986 32222 222222222 34
Q ss_pred CchHHHHHHHHHHHhhccC
Q 045267 457 GSSTKALSQLASKWNNNEG 475 (482)
Q Consensus 457 g~~~~~~~~~~~~~~~~~~ 475 (482)
-+.+..++++.+.++++-.
T Consensus 363 ~s~~~~~~~~~~~~~~~~r 381 (394)
T 3okp_A 363 WSWEIMGERLTNILQSEPR 381 (394)
T ss_dssp TBHHHHHHHHHHHHHSCCC
T ss_pred CCHHHHHHHHHHHHHHhcc
Confidence 5677788888887776654
No 28
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.30 E-value=2.6e-09 Score=107.98 Aligned_cols=360 Identities=9% Similarity=0.076 Sum_probs=176.1
Q ss_pred hhhhhccCCEEEEEcC-----------CCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCCchhhhhhhhcCCCceeEEE
Q 045267 3 QTLQAQAAPHIVLLPS-----------PGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPPSEAQKSTLESLPSSINSVF 71 (482)
Q Consensus 3 ~~~~~~~~~~ili~~~-----------~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (482)
|+.....+|||++++. ...|+-.....|+++|.++ ||+|++++....... ........++++..
T Consensus 13 ~~~~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~-G~~V~v~~~~~~~~~----~~~~~~~~~v~v~~ 87 (438)
T 3c48_A 13 GLVPRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQ-GIEVDIYTRATRPSQ----GEIVRVAENLRVIN 87 (438)
T ss_dssp ------CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHT-TCEEEEEEECCCGGG----CSEEEEETTEEEEE
T ss_pred CcccCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhc-CCEEEEEecCCCCCC----cccccccCCeEEEE
Confidence 3455677899999985 2358888999999999888 999999996532110 00111134677777
Q ss_pred ec-CCCCCCCcchhhHHHHHHHHHhhhHHHHHHHHHHhh-CCCccEEEeCCCCc--cHHHHHHHcCCccEEEccchHHHH
Q 045267 72 LP-VSLNDVAEDARAETVISLTVLRSLPCLRQELTSLVA-KATVAALVVDLFGT--DAFDVAQEFNISPYIFYPSTAMCL 147 (482)
Q Consensus 72 l~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~pD~vi~D~~~~--~~~~~A~~lgIP~v~~~~~~~~~~ 147 (482)
++ ......... .....+..+ ...+ ++.+++ ..+||+|++..... .+..+++.+++|+|..........
T Consensus 88 ~~~~~~~~~~~~-~~~~~~~~~----~~~~---~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~ 159 (438)
T 3c48_A 88 IAAGPYEGLSKE-ELPTQLAAF----TGGM---LSFTRREKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVK 159 (438)
T ss_dssp ECCSCSSSCCGG-GGGGGHHHH----HHHH---HHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHH
T ss_pred ecCCCccccchh-HHHHHHHHH----HHHH---HHHHHhccCCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcccc
Confidence 76 222221111 111111111 1111 111122 22499999875322 233567788999887655432210
Q ss_pred HHHhhhhhhhccCCCCCcccCCCCcccCCCCCccccCCCCcccccccchHHHHHHHHHhhcccccEEEEcCccccchhHH
Q 045267 148 SLFLHLEKLDQMVPRDCEYRDMSEPVQIPGCIPVHGGYLLDPVQDRKNEAYRWVLHHAKRYKLAEGIIVNSFTDLEGGAL 227 (482)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~ 227 (482)
. ..+. .. . .. ........ ....+..++.++..|-...+. +.
T Consensus 160 ---------~------------------~~~~---~~--~-~~----~~~~~~~~-~~~~~~~~d~ii~~s~~~~~~-~~ 200 (438)
T 3c48_A 160 ---------N------------------SYRD---DS--D-TP----ESEARRIC-EQQLVDNADVLAVNTQEEMQD-LM 200 (438)
T ss_dssp ---------S------------------CC---------C-CH----HHHHHHHH-HHHHHHHCSEEEESSHHHHHH-HH
T ss_pred ---------c------------------cccc---cc--C-Cc----chHHHHHH-HHHHHhcCCEEEEcCHHHHHH-HH
Confidence 0 0000 00 0 00 00011111 112234556677666433222 11
Q ss_pred HHhhhcCCCCCCCeEeeccCcCCCCCCcccccc---ccccccCCCCCcEEEEeccCCCCCCHHHHHHHHHHHHhcC----
Q 045267 228 KALQHQDEPGKPPVYPVGPLVKTGSTAESKNEG---CLKWLDDQPLGSVLFVSFGSGGTLSCEQLNELALGLEMSE---- 300 (482)
Q Consensus 228 ~~~~~~~~p~~p~~~~vGp~~~~~~~~~~~~~~---~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~---- 300 (482)
..+. . ...++..+...+....-....... +.+-+.-. +...+++..|++.. ......++++++.+.
T Consensus 201 ~~~g---~-~~~k~~vi~ngvd~~~~~~~~~~~~~~~r~~~~~~-~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~p 273 (438)
T 3c48_A 201 HHYD---A-DPDRISVVSPGADVELYSPGNDRATERSRRELGIP-LHTKVVAFVGRLQP--FKGPQVLIKAVAALFDRDP 273 (438)
T ss_dssp HHHC---C-CGGGEEECCCCCCTTTSCCC----CHHHHHHTTCC-SSSEEEEEESCBSG--GGCHHHHHHHHHHHHHHCT
T ss_pred HHhC---C-ChhheEEecCCccccccCCcccchhhhhHHhcCCC-CCCcEEEEEeeecc--cCCHHHHHHHHHHHHhhCC
Confidence 1110 0 011455555433221100000000 11111111 12356677787532 233445555554431
Q ss_pred -Cce-EEEEeCCCCCCCCcccccCCCCCCCCCCchhHHhhh----cCCCeeeccccchh---hhhhcccccccccc----
Q 045267 301 -QRF-LWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFLDRT----KGRGMLVPSWAPQA---QVLSHGSTGGFLCH---- 367 (482)
Q Consensus 301 -~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~----~~~~v~~~~~ipq~---~lL~~~~~~~~I~H---- 367 (482)
..+ ++.++.... .+...+.+.+.. ...+|.+.+|+|+. .++..++ ++|.-
T Consensus 274 ~~~~~l~i~G~~~~---------------~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~ad--v~v~ps~~e 336 (438)
T 3c48_A 274 DRNLRVIICGGPSG---------------PNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAAD--IVAVPSFNE 336 (438)
T ss_dssp TCSEEEEEECCBC---------------------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCS--EEEECCSCC
T ss_pred CcceEEEEEeCCCC---------------CCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCC--EEEECcccc
Confidence 233 333333110 001112232222 24689999999864 5788899 56543
Q ss_pred cCchhHHHHhhcCCcEeeccccccchhhHHHHHhhcceeeeeccCCCCccCHHHHHHHHHHHhcCCc-hHHHHHHHHHHH
Q 045267 368 CGWNSVLESVVNGVPLIAWPLYAEQKMNAVILTEDVKLALRPKANENGIVGRDEIAKVVKALMEGEQ-GKEVRNKMKDLK 446 (482)
Q Consensus 368 GG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~vl~~~~-~~~~r~~a~~l~ 446 (482)
|..+++.||+++|+|+|+.+ .......+++ -+.|..++. -++++++++|.++++|++ .+.+.+++++..
T Consensus 337 ~~~~~~~Eama~G~PvI~~~----~~~~~e~i~~-~~~g~~~~~-----~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~ 406 (438)
T 3c48_A 337 SFGLVAMEAQASGTPVIAAR----VGGLPIAVAE-GETGLLVDG-----HSPHAWADALATLLDDDETRIRMGEDAVEHA 406 (438)
T ss_dssp SSCHHHHHHHHTTCCEEEES----CTTHHHHSCB-TTTEEEESS-----CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHcCCCEEecC----CCChhHHhhC-CCcEEECCC-----CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 33568999999999999975 3456666666 567887764 378999999999999873 234444554444
Q ss_pred HH
Q 045267 447 DA 448 (482)
Q Consensus 447 ~~ 448 (482)
+.
T Consensus 407 ~~ 408 (438)
T 3c48_A 407 RT 408 (438)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 29
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.27 E-value=8.3e-11 Score=117.59 Aligned_cols=79 Identities=10% Similarity=0.074 Sum_probs=60.6
Q ss_pred CCCeeeccccc---hhhhhhcccccccccccCchhHHHHhhcCCcEeeccccccchhhHHHHHhhcceeeeeccCCCCcc
Q 045267 341 GRGMLVPSWAP---QAQVLSHGSTGGFLCHCGWNSVLESVVNGVPLIAWPLYAEQKMNAVILTEDVKLALRPKANENGIV 417 (482)
Q Consensus 341 ~~~v~~~~~ip---q~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~ 417 (482)
.+++.+.++++ ...+++.++ ++|+-.| |.+.||.++|+|+|+..-..+++. +.+ .|.++.+. .
T Consensus 287 ~~~v~~~~~lg~~~~~~l~~~ad--~vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~e----~v~-~G~~~lv~------~ 352 (396)
T 3dzc_A 287 VSNIVLIEPQQYLPFVYLMDRAH--IILTDSG-GIQEEAPSLGKPVLVMRETTERPE----AVA-AGTVKLVG------T 352 (396)
T ss_dssp CTTEEEECCCCHHHHHHHHHHCS--EEEESCS-GGGTTGGGGTCCEEECCSSCSCHH----HHH-HTSEEECT------T
T ss_pred CCCEEEeCCCCHHHHHHHHHhcC--EEEECCc-cHHHHHHHcCCCEEEccCCCcchH----HHH-cCceEEcC------C
Confidence 35888877765 456888999 8999987 666799999999999855555432 345 58776554 3
Q ss_pred CHHHHHHHHHHHhcCC
Q 045267 418 GRDEIAKVVKALMEGE 433 (482)
Q Consensus 418 ~~~~l~~ai~~vl~~~ 433 (482)
++++|.+++.++++|+
T Consensus 353 d~~~l~~ai~~ll~d~ 368 (396)
T 3dzc_A 353 NQQQICDALSLLLTDP 368 (396)
T ss_dssp CHHHHHHHHHHHHHCH
T ss_pred CHHHHHHHHHHHHcCH
Confidence 6899999999999886
No 30
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.22 E-value=1.4e-09 Score=112.08 Aligned_cols=81 Identities=17% Similarity=0.066 Sum_probs=61.7
Q ss_pred CCCeeeccccchh---hhhhcc----ccccccc---c-cCchhHHHHhhcCCcEeeccccccchhhHHHHHhhcceeeee
Q 045267 341 GRGMLVPSWAPQA---QVLSHG----STGGFLC---H-CGWNSVLESVVNGVPLIAWPLYAEQKMNAVILTEDVKLALRP 409 (482)
Q Consensus 341 ~~~v~~~~~ipq~---~lL~~~----~~~~~I~---H-GG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l 409 (482)
.++|.+.+++|+. .++..+ + ++|. + |--.++.||+++|+|+|+.. -......+.+ -..|..+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~d--v~v~pS~~Eg~~~~~lEAma~G~PvI~s~----~~g~~e~v~~-~~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGS--VFALTSFYEPFGLAPVEAMASGLPAVVTR----NGGPAEILDG-GKYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTC--EEEECCSCBCCCSHHHHHHHTTCCEEEES----SBHHHHHTGG-GTSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCC--EEEECcccCCCCcHHHHHHHcCCCEEEec----CCCHHHHhcC-CceEEEe
Confidence 4679999999865 467788 8 5652 2 33458999999999999875 3455666666 5578877
Q ss_pred ccCCCCccCHHHHHHHHHHHhcCC
Q 045267 410 KANENGIVGRDEIAKVVKALMEGE 433 (482)
Q Consensus 410 ~~~~~~~~~~~~l~~ai~~vl~~~ 433 (482)
+. -+.++++++|.++++|+
T Consensus 407 ~~-----~d~~~la~~i~~ll~~~ 425 (499)
T 2r60_A 407 DP-----EDPEDIARGLLKAFESE 425 (499)
T ss_dssp CT-----TCHHHHHHHHHHHHSCH
T ss_pred CC-----CCHHHHHHHHHHHHhCH
Confidence 65 37899999999999986
No 31
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.20 E-value=1.3e-08 Score=102.56 Aligned_cols=117 Identities=14% Similarity=0.047 Sum_probs=82.4
Q ss_pred CCeeeccccchhh---hhhccccccccc----ccCchhHHHHhhcCCcEeeccccccchhhHHHHHhhcceeeeeccCCC
Q 045267 342 RGMLVPSWAPQAQ---VLSHGSTGGFLC----HCGWNSVLESVVNGVPLIAWPLYAEQKMNAVILTEDVKLALRPKANEN 414 (482)
Q Consensus 342 ~~v~~~~~ipq~~---lL~~~~~~~~I~----HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~ 414 (482)
.++.+.+|+|+.+ ++..++ ++|. -|--+++.||+++|+|+|+.. .......+++ |.|..++..
T Consensus 311 ~~~~~~g~~~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~EAma~G~Pvi~s~----~~~~~e~~~~--~~g~~~~~~-- 380 (439)
T 3fro_A 311 NVKVITEMLSREFVRELYGSVD--FVIIPSYFEPFGLVALEAMCLGAIPIASA----VGGLRDIITN--ETGILVKAG-- 380 (439)
T ss_dssp TEEEECSCCCHHHHHHHHTTCS--EEEECBSCCSSCHHHHHHHHTTCEEEEES----STHHHHHCCT--TTCEEECTT--
T ss_pred CEEEEcCCCCHHHHHHHHHHCC--EEEeCCCCCCccHHHHHHHHCCCCeEEcC----CCCcceeEEc--CceEEeCCC--
Confidence 5666789999754 678888 5552 244568999999999999864 3445555545 578777653
Q ss_pred CccCHHHHHHHHHHHhc-CCc-hHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHhhccCCCcc
Q 045267 415 GIVGRDEIAKVVKALME-GEQ-GKEVRNKMKDLKDAAAAVLSENGSSTKALSQLASKWNNNEGKPCS 479 (482)
Q Consensus 415 ~~~~~~~l~~ai~~vl~-~~~-~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~ 479 (482)
++++++++|.++++ |++ .+.+.+++++.. +.-+.+..++++.+.+.+.....++
T Consensus 381 ---d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--------~~~s~~~~~~~~~~~~~~~~~~~~~ 436 (439)
T 3fro_A 381 ---DPGELANAILKALELSRSDLSKFRENCKKRA--------MSFSWEKSAERYVKAYTGSIDRAFD 436 (439)
T ss_dssp ---CHHHHHHHHHHHHHHTTTTTHHHHHHHHHHH--------HTSCHHHHHHHHHHHHHTCSCCBCS
T ss_pred ---CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH--------hhCcHHHHHHHHHHHHHHHHHhhhh
Confidence 78999999999998 763 233444443332 2367788889999888887766554
No 32
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.18 E-value=4.3e-09 Score=104.98 Aligned_cols=116 Identities=11% Similarity=0.156 Sum_probs=79.6
Q ss_pred CCCeeeccccchh---hhhhccccccccc----ccCch-hHHHHhhcCCcEeeccccccchhhHHHHHhhcceeeeeccC
Q 045267 341 GRGMLVPSWAPQA---QVLSHGSTGGFLC----HCGWN-SVLESVVNGVPLIAWPLYAEQKMNAVILTEDVKLALRPKAN 412 (482)
Q Consensus 341 ~~~v~~~~~ipq~---~lL~~~~~~~~I~----HGG~g-s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~ 412 (482)
.+++.+.+++|+. .++..++ ++|. +.|.+ ++.||+++|+|+|+.+. ......+.+ -+.|..++..
T Consensus 262 ~~~v~~~g~~~~~~~~~~~~~ad--v~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~-~~~g~~~~~~ 334 (406)
T 2gek_A 262 AGHLRFLGQVDDATKASAMRSAD--VYCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLAD-GDAGRLVPVD 334 (406)
T ss_dssp GGGEEECCSCCHHHHHHHHHHSS--EEEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTT-TTSSEECCTT
T ss_pred cCcEEEEecCCHHHHHHHHHHCC--EEEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcC-CCceEEeCCC
Confidence 4689999999964 6888999 5552 44444 89999999999999754 566677777 5778777643
Q ss_pred CCCccCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHhhccC
Q 045267 413 ENGIVGRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQLASKWNNNEG 475 (482)
Q Consensus 413 ~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~ 475 (482)
+.++++++|.+++.|+ +.+++ +++..++... .-+.+..++++.+.+.+...
T Consensus 335 -----d~~~l~~~i~~l~~~~---~~~~~---~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~~ 385 (406)
T 2gek_A 335 -----DADGMAAALIGILEDD---QLRAG---YVARASERVH-RYDWSVVSAQIMRVYETVSG 385 (406)
T ss_dssp -----CHHHHHHHHHHHHHCH---HHHHH---HHHHHHHHGG-GGBHHHHHHHHHHHHHHHCC
T ss_pred -----CHHHHHHHHHHHHcCH---HHHHH---HHHHHHHHHH-hCCHHHHHHHHHHHHHHHHh
Confidence 7899999999999886 33322 2222222222 35556666666666555443
No 33
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.17 E-value=2.7e-10 Score=113.10 Aligned_cols=109 Identities=13% Similarity=0.138 Sum_probs=73.8
Q ss_pred CCeeeccccch---hhhhhcccccccccccCchhHHHHhhcCCcEeeccccccchhhHHHHHhhcceeeeeccCCCCccC
Q 045267 342 RGMLVPSWAPQ---AQVLSHGSTGGFLCHCGWNSVLESVVNGVPLIAWPLYAEQKMNAVILTEDVKLALRPKANENGIVG 418 (482)
Q Consensus 342 ~~v~~~~~ipq---~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~ 418 (482)
+++.+.+++++ ..++..++ +||+..| +.+.||+++|+|+|+.+..++... +.+ .|.|..++. +
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad--~~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e----~v~-~g~g~lv~~------d 328 (384)
T 1vgv_A 263 KNVILIDPQEYLPFVWLMNHAW--LILTDSG-GIQEEAPSLGKPVLVMRDTTERPE----AVT-AGTVRLVGT------D 328 (384)
T ss_dssp TTEEEECCCCHHHHHHHHHHCS--EEEESSS-TGGGTGGGGTCCEEEESSCCSCHH----HHH-HTSEEEECS------S
T ss_pred CCEEEeCCCCHHHHHHHHHhCc--EEEECCc-chHHHHHHcCCCEEEccCCCCcch----hhh-CCceEEeCC------C
Confidence 58888666654 56889999 8998875 458899999999999987544333 345 588888753 6
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHh
Q 045267 419 RDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQLASKWN 471 (482)
Q Consensus 419 ~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~ 471 (482)
+++|+++|.++++|+ +.+++ +++..++ .....+.++.++.+.+.+.
T Consensus 329 ~~~la~~i~~ll~d~---~~~~~---~~~~~~~-~~~~~~~~~i~~~~~~~~~ 374 (384)
T 1vgv_A 329 KQRIVEEVTRLLKDE---NEYQA---MSRAHNP-YGDGQACSRILEALKNNRI 374 (384)
T ss_dssp HHHHHHHHHHHHHCH---HHHHH---HHSSCCT-TCCSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHhCh---HHHhh---hhhccCC-CcCCCHHHHHHHHHHHHHH
Confidence 799999999999986 33332 2222222 1134555555555555433
No 34
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.05 E-value=4e-09 Score=104.15 Aligned_cols=108 Identities=14% Similarity=0.148 Sum_probs=71.7
Q ss_pred CCeeeccccch---hhhhhcccccccccccCchhHHHHhhcCCcEeeccccccchhhHHHHHhhcceeeeeccCCCCccC
Q 045267 342 RGMLVPSWAPQ---AQVLSHGSTGGFLCHCGWNSVLESVVNGVPLIAWPLYAEQKMNAVILTEDVKLALRPKANENGIVG 418 (482)
Q Consensus 342 ~~v~~~~~ipq---~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~ 418 (482)
+++.+.+++++ ..++..++ ++|+..| +.+.||+++|+|+|+.+..+... .+.+ .|.|..++ .+
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad--~~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~----e~v~-~g~g~~v~------~d 328 (375)
T 3beo_A 263 GRIHLIEPLDVIDFHNVAARSY--LMLTDSG-GVQEEAPSLGVPVLVLRDTTERP----EGIE-AGTLKLAG------TD 328 (375)
T ss_dssp TTEEEECCCCHHHHHHHHHTCS--EEEECCH-HHHHHHHHHTCCEEECSSCCSCH----HHHH-TTSEEECC------SC
T ss_pred CCEEEeCCCCHHHHHHHHHhCc--EEEECCC-ChHHHHHhcCCCEEEecCCCCCc----eeec-CCceEEcC------CC
Confidence 68888777764 46788899 8888764 45889999999999985433332 2345 57888775 26
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHH
Q 045267 419 RDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQLASKW 470 (482)
Q Consensus 419 ~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~ 470 (482)
+++|+++|.++++|+ +.+++ +++..++. .++.+.++.++.+.+.+
T Consensus 329 ~~~la~~i~~ll~~~---~~~~~---~~~~~~~~-~~~~~~~~i~~~~~~~~ 373 (375)
T 3beo_A 329 EETIFSLADELLSDK---EAHDK---MSKASNPY-GDGRASERIVEAILKHF 373 (375)
T ss_dssp HHHHHHHHHHHHHCH---HHHHH---HCCCCCTT-CCSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCh---HhHhh---hhhcCCCC-CCCcHHHHHHHHHHHHh
Confidence 799999999999886 43333 22222221 13455555555555443
No 35
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.05 E-value=2e-07 Score=92.63 Aligned_cols=115 Identities=17% Similarity=0.123 Sum_probs=76.9
Q ss_pred CCeeeccccc-hhhhhhcccccccc----cccCchhHHHHhhcCCcEeeccccccchhhHHHHHhhcceeeeeccCCCCc
Q 045267 342 RGMLVPSWAP-QAQVLSHGSTGGFL----CHCGWNSVLESVVNGVPLIAWPLYAEQKMNAVILTEDVKLALRPKANENGI 416 (482)
Q Consensus 342 ~~v~~~~~ip-q~~lL~~~~~~~~I----~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~ 416 (482)
++|.+.++.. ...++..++ ++| .-|..+++.||+++|+|+|+.+.. .....+++ -+.|..++.
T Consensus 267 ~~v~~~g~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e~v~~-~~~g~~~~~----- 334 (394)
T 2jjm_A 267 DRVLFLGKQDNVAELLAMSD--LMLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPEVIQH-GDTGYLCEV----- 334 (394)
T ss_dssp GGBCCCBSCSCTHHHHHTCS--EEEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTTTCCB-TTTEEEECT-----
T ss_pred CeEEEeCchhhHHHHHHhCC--EEEeccccCCCchHHHHHHhcCCCEEEecCC----ChHHHhhc-CCceEEeCC-----
Confidence 5777777755 357888999 677 556677999999999999997643 33344455 467777754
Q ss_pred cCHHHHHHHHHHHhcCCchHHHHHHH-HHHHHHHHHHhhcCCchHHHHHHHHHHHhhccC
Q 045267 417 VGRDEIAKVVKALMEGEQGKEVRNKM-KDLKDAAAAVLSENGSSTKALSQLASKWNNNEG 475 (482)
Q Consensus 417 ~~~~~l~~ai~~vl~~~~~~~~r~~a-~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~ 475 (482)
-+.++++++|.+++.|+ +.+++. ++.++.+. +.-+.+..++++.+.+.+...
T Consensus 335 ~d~~~la~~i~~l~~~~---~~~~~~~~~~~~~~~----~~~s~~~~~~~~~~~~~~~~~ 387 (394)
T 2jjm_A 335 GDTTGVADQAIQLLKDE---ELHRNMGERARESVY----EQFRSEKIVSQYETIYYDVLR 387 (394)
T ss_dssp TCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHH----HHSCHHHHHHHHHHHHHHTC-
T ss_pred CCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHH----HhCCHHHHHHHHHHHHHHHHh
Confidence 37899999999999986 322222 22222222 346666777777776666544
No 36
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.04 E-value=5.2e-09 Score=102.12 Aligned_cols=122 Identities=16% Similarity=0.137 Sum_probs=77.7
Q ss_pred EEEeccCCCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCCCCCcccccCCCCCCCCCCchhH---HhhhcCCCeeecccc
Q 045267 274 LFVSFGSGGTLSCEQLNELALGLEMSEQRFLWVVRSPNNAANSTFFSVNSHKDPYDFLPKGF---LDRTKGRGMLVPSWA 350 (482)
Q Consensus 274 v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~---~~~~~~~~v~~~~~i 350 (482)
+++..|++. ..+....++++++..+.+++++ +.+.. .+.+ .++.. +++.+.+|+
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~-G~g~~-------------------~~~l~~~~~~~~-~~v~~~g~~ 220 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLA-GPAWE-------------------PEYFDEITRRYG-STVEPIGEV 220 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEE-SCCCC-------------------HHHHHHHHHHHT-TTEEECCCC
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEE-eCccc-------------------HHHHHHHHHHhC-CCEEEeccC
Confidence 344456643 3455777888888776554443 33211 1222 22223 799999999
Q ss_pred chh---hhhhcccccccc--cc-----------cC-chhHHHHhhcCCcEeeccccccchhhHHHHHhhc--ceeeeecc
Q 045267 351 PQA---QVLSHGSTGGFL--CH-----------CG-WNSVLESVVNGVPLIAWPLYAEQKMNAVILTEDV--KLALRPKA 411 (482)
Q Consensus 351 pq~---~lL~~~~~~~~I--~H-----------GG-~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~--G~G~~l~~ 411 (482)
|+. .++..++ ++| +. -| -+++.||+++|+|+|+... ..+...+++ . +.|..++
T Consensus 221 ~~~~l~~~~~~ad--v~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~-~~~~~g~~~~- 292 (342)
T 2iuy_A 221 GGERRLDLLASAH--AVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPS-VGEVVGYGTD- 292 (342)
T ss_dssp CHHHHHHHHHHCS--EEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGG-GEEECCSSSC-
T ss_pred CHHHHHHHHHhCC--EEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcc-cCCCceEEcC-
Confidence 975 6888899 555 22 33 4579999999999999865 334444444 1 3455443
Q ss_pred CCCCccCHHHHHHHHHHHhc
Q 045267 412 NENGIVGRDEIAKVVKALME 431 (482)
Q Consensus 412 ~~~~~~~~~~l~~ai~~vl~ 431 (482)
.+.++++++|.++++
T Consensus 293 -----~d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 293 -----FAPDEARRTLAGLPA 307 (342)
T ss_dssp -----CCHHHHHHHHHTSCC
T ss_pred -----CCHHHHHHHHHHHHH
Confidence 267999999999885
No 37
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.04 E-value=3.4e-07 Score=90.04 Aligned_cols=141 Identities=12% Similarity=0.154 Sum_probs=92.8
Q ss_pred cEEEEeccCCCCCCHHHHHHHHHHHHhcCC----ce-EEEEeCCCCCCCCcccccCCCCCCCCCCchhHHhhh----cCC
Q 045267 272 SVLFVSFGSGGTLSCEQLNELALGLEMSEQ----RF-LWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFLDRT----KGR 342 (482)
Q Consensus 272 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~----~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~----~~~ 342 (482)
..+++..|+.. .......++++++.+.. .+ ++.++.+. .+.+.+.. ...
T Consensus 196 ~~~i~~~G~~~--~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~--------------------~~~~~~~~~~~~~~~ 253 (374)
T 2iw1_A 196 QNLLLQVGSDF--GRKGVDRSIEALASLPESLRHNTLLFVVGQDK--------------------PRKFEALAEKLGVRS 253 (374)
T ss_dssp CEEEEEECSCT--TTTTHHHHHHHHHTSCHHHHHTEEEEEESSSC--------------------CHHHHHHHHHHTCGG
T ss_pred CeEEEEeccch--hhcCHHHHHHHHHHhHhccCCceEEEEEcCCC--------------------HHHHHHHHHHcCCCC
Confidence 36667777653 23456667788877643 22 33444321 02222222 246
Q ss_pred Ceeeccccc-hhhhhhccccccccc----ccCchhHHHHhhcCCcEeeccccccchhhHHHHHhhcceeeeeccCCCCcc
Q 045267 343 GMLVPSWAP-QAQVLSHGSTGGFLC----HCGWNSVLESVVNGVPLIAWPLYAEQKMNAVILTEDVKLALRPKANENGIV 417 (482)
Q Consensus 343 ~v~~~~~ip-q~~lL~~~~~~~~I~----HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~ 417 (482)
++.+.++.. -..++..++ ++|. -|.-+++.||+++|+|+|+.+. ..+...+++ .+.|..++.. -
T Consensus 254 ~v~~~g~~~~~~~~~~~ad--~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~-~~~g~~~~~~----~ 322 (374)
T 2iw1_A 254 NVHFFSGRNDVSELMAAAD--LLLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIAD-ANCGTVIAEP----F 322 (374)
T ss_dssp GEEEESCCSCHHHHHHHCS--EEEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHH-HTCEEEECSS----C
T ss_pred cEEECCCcccHHHHHHhcC--EEEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhcc-CCceEEeCCC----C
Confidence 788888765 366888899 6664 5667889999999999999754 456777888 7899888633 4
Q ss_pred CHHHHHHHHHHHhcCCc-hHHHHHHHHHH
Q 045267 418 GRDEIAKVVKALMEGEQ-GKEVRNKMKDL 445 (482)
Q Consensus 418 ~~~~l~~ai~~vl~~~~-~~~~r~~a~~l 445 (482)
+.++++++|.++++|++ .+.+.+++++.
T Consensus 323 ~~~~l~~~i~~l~~~~~~~~~~~~~~~~~ 351 (374)
T 2iw1_A 323 SQEQLNEVLRKALTQSPLRMAWAENARHY 351 (374)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcChHHHHHHHHHHHHH
Confidence 88999999999999873 22334444433
No 38
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.91 E-value=3e-08 Score=98.42 Aligned_cols=159 Identities=14% Similarity=0.103 Sum_probs=97.7
Q ss_pred CcEEEEeccCCCCCC-HHHHHHHHHHHHhc----CCceEEEEeCCCCCCCCcccccCCCCCCCCCCchhHHhh---h-cC
Q 045267 271 GSVLFVSFGSGGTLS-CEQLNELALGLEMS----EQRFLWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFLDR---T-KG 341 (482)
Q Consensus 271 ~~~v~vs~GS~~~~~-~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~---~-~~ 341 (482)
++.++++.|...... .+.+..++++++.+ +..+|+...... -+.+.+. . ..
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~~--------------------~~~l~~~~~~~~~~ 262 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPRT--------------------KKRLEDLEGFKELG 262 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHHH--------------------HHHHHTSGGGGGTG
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChHH--------------------HHHHHHHHHHhcCC
Confidence 458888888754332 34566777777654 455666543210 0111111 1 12
Q ss_pred CCeeeccccc---hhhhhhcccccccccccCchhHHHHhhcCCcEeeccccccchhhHHHHHhhcceeeeeccCCCCccC
Q 045267 342 RGMLVPSWAP---QAQVLSHGSTGGFLCHCGWNSVLESVVNGVPLIAWPLYAEQKMNAVILTEDVKLALRPKANENGIVG 418 (482)
Q Consensus 342 ~~v~~~~~ip---q~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~ 418 (482)
+++.+.+.++ ...+++.++ ++|+-.|. .+.||.++|+|+|.++...+.+. ..+ .|.++.+. .+
T Consensus 263 ~~v~l~~~lg~~~~~~l~~~ad--lvvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~-~G~~~lv~------~d 328 (385)
T 4hwg_A 263 DKIRFLPAFSFTDYVKLQMNAF--CILSDSGT-ITEEASILNLPALNIREAHERPE----GMD-AGTLIMSG------FK 328 (385)
T ss_dssp GGEEECCCCCHHHHHHHHHHCS--EEEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHH-HTCCEECC------SS
T ss_pred CCEEEEcCCCHHHHHHHHHhCc--EEEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhh-cCceEEcC------CC
Confidence 4777765554 457899999 99998775 46899999999999987554222 245 58777664 47
Q ss_pred HHHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHH
Q 045267 419 RDEIAKVVKALMEGEQ-GKEVRNKMKDLKDAAAAVLSENGSSTKALSQLASKW 470 (482)
Q Consensus 419 ~~~l~~ai~~vl~~~~-~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~ 470 (482)
+++|.+++.++++|+. .+.+++++.. . ...|+++++.++.+.+.+
T Consensus 329 ~~~i~~ai~~ll~d~~~~~~m~~~~~~----~---~g~g~aa~rI~~~l~~~~ 374 (385)
T 4hwg_A 329 AERVLQAVKTITEEHDNNKRTQGLVPD----Y---NEAGLVSKKILRIVLSYV 374 (385)
T ss_dssp HHHHHHHHHHHHTTCBTTBCCSCCCHH----H---HTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhChHHHHHhhccCCC----C---CCCChHHHHHHHHHHHHh
Confidence 8999999999999873 1122222221 1 025777777777776544
No 39
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.90 E-value=8.5e-07 Score=88.73 Aligned_cols=112 Identities=17% Similarity=0.098 Sum_probs=76.7
Q ss_pred CCCeeeccccc---h---hhhhhccccccccccc----CchhHHHHhhcCCcEeeccccccchhhHHHHHhhcceeeeec
Q 045267 341 GRGMLVPSWAP---Q---AQVLSHGSTGGFLCHC----GWNSVLESVVNGVPLIAWPLYAEQKMNAVILTEDVKLALRPK 410 (482)
Q Consensus 341 ~~~v~~~~~ip---q---~~lL~~~~~~~~I~HG----G~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~ 410 (482)
.++|.+.+|++ + ..++..++ ++|.-. .-+++.||+++|+|+|+.+. ..+...+++ -+.|..++
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad--~~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~-~~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASD--VILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVD-GETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCS--EEEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCB-TTTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCC--EEEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheec-CCCeEEEC
Confidence 46898988776 2 45778888 666433 45689999999999999754 456666766 56787774
Q ss_pred cCCCCccCHHHHHHHHHHHhcCCchHHHHHHHH-HHHHHHHHHhhcCCchHHHHHHHHHHHhhc
Q 045267 411 ANENGIVGRDEIAKVVKALMEGEQGKEVRNKMK-DLKDAAAAVLSENGSSTKALSQLASKWNNN 473 (482)
Q Consensus 411 ~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~-~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~ 473 (482)
+.++++++|.++++|+ +.+++.. +-.+.++ +.-+.+..++++.+.+.+.
T Consensus 365 -------d~~~la~~i~~ll~~~---~~~~~~~~~a~~~~~----~~fs~~~~~~~~~~~~~~l 414 (416)
T 2x6q_A 365 -------DANEAVEVVLYLLKHP---EVSKEMGAKAKERVR----KNFIITKHMERYLDILNSL 414 (416)
T ss_dssp -------SHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHH----HHTBHHHHHHHHHHHHHTC
T ss_pred -------CHHHHHHHHHHHHhCH---HHHHHHHHHHHHHHH----HHcCHHHHHHHHHHHHHHh
Confidence 5689999999999986 3332222 2222222 3456667777777766654
No 40
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.62 E-value=1.8e-06 Score=92.92 Aligned_cols=112 Identities=13% Similarity=0.080 Sum_probs=70.2
Q ss_pred CCCeeecc----ccchhhhhh----ccccccccc----ccCchhHHHHhhcCCcEeeccccccchhhHHHHHhhcceeee
Q 045267 341 GRGMLVPS----WAPQAQVLS----HGSTGGFLC----HCGWNSVLESVVNGVPLIAWPLYAEQKMNAVILTEDVKLALR 408 (482)
Q Consensus 341 ~~~v~~~~----~ipq~~lL~----~~~~~~~I~----HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~ 408 (482)
..+|.+.+ ++|+.++.. .++ +||. -|--.++.||+++|+|+|+- |.......+.+ -..|..
T Consensus 639 ~~~V~flG~~~~~v~~~eL~~~~~~aaD--vfV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~d-g~~Gll 711 (816)
T 3s28_A 639 NGQFRWISSQMDRVRNGELYRYICDTKG--AFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVH-GKSGFH 711 (816)
T ss_dssp BBBEEEECCCCCHHHHHHHHHHHHHTTC--EEEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCB-TTTBEE
T ss_pred CCcEEEccCccccCCHHHHHHHHHhcCe--EEEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHcc-CCcEEE
Confidence 36787777 455555554 456 5653 23456899999999999996 55566667777 567888
Q ss_pred eccCCCCccCHHHHHHHHHHHh----cCCchHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHH
Q 045267 409 PKANENGIVGRDEIAKVVKALM----EGEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQLASKW 470 (482)
Q Consensus 409 l~~~~~~~~~~~~l~~ai~~vl----~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~ 470 (482)
++.. ++++++++|.+++ .|+ +.+++.. +..++...+.-+-+..++++.+-+
T Consensus 712 v~p~-----D~e~LA~aI~~lL~~Ll~d~---~~~~~m~---~~ar~~a~~~fSwe~~a~~ll~lY 766 (816)
T 3s28_A 712 IDPY-----HGDQAADTLADFFTKCKEDP---SHWDEIS---KGGLQRIEEKYTWQIYSQRLLTLT 766 (816)
T ss_dssp ECTT-----SHHHHHHHHHHHHHHHHHCT---HHHHHHH---HHHHHHHHHSCCHHHHHHHHHHHH
T ss_pred eCCC-----CHHHHHHHHHHHHHHhccCH---HHHHHHH---HHHHHHHHHhCCHHHHHHHHHHHH
Confidence 7753 6889999997766 776 3332222 222222223455566666665533
No 41
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.40 E-value=6.2e-05 Score=76.74 Aligned_cols=112 Identities=7% Similarity=-0.045 Sum_probs=74.8
Q ss_pred CCee-eccccch--hhhhhccccccccc----ccCchhHHHHhhcCCcEeeccccccchhhHHHHHhhc---------ce
Q 045267 342 RGML-VPSWAPQ--AQVLSHGSTGGFLC----HCGWNSVLESVVNGVPLIAWPLYAEQKMNAVILTEDV---------KL 405 (482)
Q Consensus 342 ~~v~-~~~~ipq--~~lL~~~~~~~~I~----HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~---------G~ 405 (482)
.++. +.++... ..++..++ ++|. -|.-.++.||+++|+|+|+... ..+...+.+ - +.
T Consensus 347 ~~v~~~~g~~~~~~~~~~~~ad--v~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~ 419 (485)
T 2qzs_A 347 GQVGVQIGYHEAFSHRIMGGAD--VILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSD-CSLENLADGVAS 419 (485)
T ss_dssp TTEEEEESCCHHHHHHHHHHCS--EEEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCC
T ss_pred CcEEEeCCCCHHHHHHHHHhCC--EEEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceecc-Cccccccccccc
Confidence 5775 7788333 36788999 5652 2445678899999999999753 455555555 3 57
Q ss_pred eeeeccCCCCccCHHHHHHHHHHHh---cCCchHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHhhcc
Q 045267 406 ALRPKANENGIVGRDEIAKVVKALM---EGEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQLASKWNNNE 474 (482)
Q Consensus 406 G~~l~~~~~~~~~~~~l~~ai~~vl---~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~~ 474 (482)
|..++. -++++++++|.+++ .|+ +.+++ +++..++ +.-+-+..++++.+.+.+..
T Consensus 420 G~l~~~-----~d~~~la~~i~~ll~~~~~~---~~~~~---~~~~~~~---~~fs~~~~~~~~~~ly~~~~ 477 (485)
T 2qzs_A 420 GFVFED-----SNAWSLLRAIRRAFVLWSRP---SLWRF---VQRQAMA---MDFSWQVAAKSYRELYYRLK 477 (485)
T ss_dssp BEEECS-----SSHHHHHHHHHHHHHHHTSH---HHHHH---HHHHHHH---CCCCHHHHHHHHHHHHHHHC
T ss_pred eEEECC-----CCHHHHHHHHHHHHHHcCCH---HHHHH---HHHHHHh---hcCCHHHHHHHHHHHHHHhh
Confidence 777764 37899999999999 565 33332 2222222 56777777888777665543
No 42
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.38 E-value=0.00014 Score=75.79 Aligned_cols=123 Identities=10% Similarity=0.034 Sum_probs=81.3
Q ss_pred CCeeeccccchh---hhhhcccccccc---cccCchhHHHHhhcCCcEeeccccccch-hhHHHHHhhcceeeeeccCCC
Q 045267 342 RGMLVPSWAPQA---QVLSHGSTGGFL---CHCGWNSVLESVVNGVPLIAWPLYAEQK-MNAVILTEDVKLALRPKANEN 414 (482)
Q Consensus 342 ~~v~~~~~ipq~---~lL~~~~~~~~I---~HGG~gs~~eal~~GvP~v~~P~~~DQ~-~na~rv~~~~G~G~~l~~~~~ 414 (482)
++|.+.+++|+. .++..++ +|| ..|+.+++.||+++|+|+|++|-..=.. .-+..+.. .|+...+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~ad--v~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~-~g~~e~v~---- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHAD--LFLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHH-LGLDEMNV---- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCS--EEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHH-HTCGGGBC----
T ss_pred hHEEeeCCCCHHHHHHHHhcCC--EEeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHH-CCChhhhc----
Confidence 679999999854 4678888 565 2367778999999999999987431111 12345555 67765553
Q ss_pred CccCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHh--hcCCchHHHHHHHHHHHhhccCCCcc
Q 045267 415 GIVGRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVL--SENGSSTKALSQLASKWNNNEGKPCS 479 (482)
Q Consensus 415 ~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~--~~~g~~~~~~~~~~~~~~~~~~~~~~ 479 (482)
-+++++.+++.+++.|+ +.+++ +++..++.. .+..+.+..++++.+.+.+.....|-
T Consensus 507 --~~~~~la~~i~~l~~~~---~~~~~---~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~~~~~ 565 (568)
T 2vsy_A 507 --ADDAAFVAKAVALASDP---AALTA---LHARVDVLRRASGVFHMDGFADDFGALLQALARRHGW 565 (568)
T ss_dssp --SSHHHHHHHHHHHHHCH---HHHHH---HHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHTTTC
T ss_pred --CCHHHHHHHHHHHhcCH---HHHHH---HHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 27899999999999986 33332 222222222 24567777777777776666555554
No 43
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.35 E-value=6.6e-05 Score=76.53 Aligned_cols=114 Identities=7% Similarity=-0.005 Sum_probs=75.8
Q ss_pred CCCee-eccccch--hhhhhccccccccc----ccCchhHHHHhhcCCcEeeccccccchhhHHHHHhhc---------c
Q 045267 341 GRGML-VPSWAPQ--AQVLSHGSTGGFLC----HCGWNSVLESVVNGVPLIAWPLYAEQKMNAVILTEDV---------K 404 (482)
Q Consensus 341 ~~~v~-~~~~ipq--~~lL~~~~~~~~I~----HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~---------G 404 (482)
+.++. +.++... ..++..++ ++|. -|.-.++.||+++|+|+|+... ..+...+.+ - +
T Consensus 345 ~~~v~~~~g~~~~~~~~~~~~ad--v~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~ 417 (485)
T 1rzu_A 345 HGRVGVAIGYNEPLSHLMQAGCD--AIIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVID-ANHAALASKAA 417 (485)
T ss_dssp TTTEEEEESCCHHHHHHHHHHCS--EEEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCC
T ss_pred CCcEEEecCCCHHHHHHHHhcCC--EEEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecc-cccccccccCC
Confidence 36786 6788332 25788899 6662 2445689999999999999754 455555555 4 5
Q ss_pred eeeeeccCCCCccCHHHHHHHHHHHh---cCCchHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHhhccC
Q 045267 405 LALRPKANENGIVGRDEIAKVVKALM---EGEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQLASKWNNNEG 475 (482)
Q Consensus 405 ~G~~l~~~~~~~~~~~~l~~ai~~vl---~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~ 475 (482)
.|..++. -++++++++|.+++ .|+ +.+++ +++..++ +.-+-+..++++.+.+.+...
T Consensus 418 ~G~l~~~-----~d~~~la~~i~~ll~~~~~~---~~~~~---~~~~~~~---~~fs~~~~~~~~~~~y~~~~~ 477 (485)
T 1rzu_A 418 TGVQFSP-----VTLDGLKQAIRRTVRYYHDP---KLWTQ---MQKLGMK---SDVSWEKSAGLYAALYSQLIS 477 (485)
T ss_dssp CBEEESS-----CSHHHHHHHHHHHHHHHTCH---HHHHH---HHHHHHT---CCCBHHHHHHHHHHHHHHHTC
T ss_pred cceEeCC-----CCHHHHHHHHHHHHHHhCCH---HHHHH---HHHHHHH---HhCChHHHHHHHHHHHHHhhC
Confidence 7877754 37899999999999 665 33332 2222232 567777777777776655443
No 44
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.33 E-value=0.00012 Score=73.09 Aligned_cols=74 Identities=12% Similarity=0.046 Sum_probs=56.6
Q ss_pred CCeeeccccchhh---hhhccccccccc---ccC-chhHHHHh-------hcCCcEeeccccccchhhHHHHHhhcceee
Q 045267 342 RGMLVPSWAPQAQ---VLSHGSTGGFLC---HCG-WNSVLESV-------VNGVPLIAWPLYAEQKMNAVILTEDVKLAL 407 (482)
Q Consensus 342 ~~v~~~~~ipq~~---lL~~~~~~~~I~---HGG-~gs~~eal-------~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~ 407 (482)
++|.+.+++|+.+ ++..++ ++|. +-| -+++.||+ ++|+|+|+... +.+ -..|.
T Consensus 265 ~~V~f~G~~~~~~l~~~~~~ad--v~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~-~~~G~ 331 (406)
T 2hy7_A 265 DNVIVYGEMKHAQTIGYIKHAR--FGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVG-PYKSR 331 (406)
T ss_dssp TTEEEECCCCHHHHHHHHHTCS--EEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTC-SCSSE
T ss_pred CCEEEcCCCCHHHHHHHHHhcC--EEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------ccc-CcceE
Confidence 5888999998654 678888 5542 334 45688999 99999999755 555 45676
Q ss_pred e-eccCCCCccCHHHHHHHHHHHhcCC
Q 045267 408 R-PKANENGIVGRDEIAKVVKALMEGE 433 (482)
Q Consensus 408 ~-l~~~~~~~~~~~~l~~ai~~vl~~~ 433 (482)
. ++.. ++++++++|.++++|+
T Consensus 332 l~v~~~-----d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 332 FGYTPG-----NADSVIAAITQALEAP 353 (406)
T ss_dssp EEECTT-----CHHHHHHHHHHHHHCC
T ss_pred EEeCCC-----CHHHHHHHHHHHHhCc
Confidence 6 5543 7899999999999987
No 45
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.30 E-value=5e-06 Score=72.69 Aligned_cols=131 Identities=14% Similarity=0.115 Sum_probs=86.7
Q ss_pred EEEEeccCCCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCCCCCcccccCCCCCCCCCCchhHH--hhhcCCCeeecccc
Q 045267 273 VLFVSFGSGGTLSCEQLNELALGLEMSEQRFLWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFL--DRTKGRGMLVPSWA 350 (482)
Q Consensus 273 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~--~~~~~~~v~~~~~i 350 (482)
.+++..|+.. .......++++++.++.--+..++.+.. ...+-+-.. +.....++.+.+|+
T Consensus 24 ~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~G~~~~---------------~~~l~~~~~~~~~~l~~~v~~~g~~ 86 (177)
T 2f9f_A 24 DFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIVGWFSK---------------GDHAERYARKIMKIAPDNVKFLGSV 86 (177)
T ss_dssp SCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEEBCCCT---------------TSTHHHHHHHHHHHSCTTEEEEESC
T ss_pred CEEEEEeccc--cccCHHHHHHHHHhCCCcEEEEEecCcc---------------HHHHHHHHHhhhcccCCcEEEeCCC
Confidence 3445566653 3455777888888874323333443221 111111111 11235689999999
Q ss_pred ch---hhhhhccccccccc---ccCc-hhHHHHhhcCCcEeeccccccchhhHHHHHhhcceeeeeccCCCCccCHHHHH
Q 045267 351 PQ---AQVLSHGSTGGFLC---HCGW-NSVLESVVNGVPLIAWPLYAEQKMNAVILTEDVKLALRPKANENGIVGRDEIA 423 (482)
Q Consensus 351 pq---~~lL~~~~~~~~I~---HGG~-gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~ 423 (482)
|+ ..++..++ ++|. +.|+ .++.||+++|+|+|+.. ...+...+++ .+.|..+ . -+.++++
T Consensus 87 ~~~e~~~~~~~ad--i~v~ps~~e~~~~~~~Eama~G~PvI~~~----~~~~~e~i~~-~~~g~~~--~----~d~~~l~ 153 (177)
T 2f9f_A 87 SEEELIDLYSRCK--GLLCTAKDEDFGLTPIEAMASGKPVIAVN----EGGFKETVIN-EKTGYLV--N----ADVNEII 153 (177)
T ss_dssp CHHHHHHHHHHCS--EEEECCSSCCSCHHHHHHHHTTCCEEEES----SHHHHHHCCB-TTTEEEE--C----SCHHHHH
T ss_pred CHHHHHHHHHhCC--EEEeCCCcCCCChHHHHHHHcCCcEEEeC----CCCHHHHhcC-CCccEEe--C----CCHHHHH
Confidence 97 56888899 6664 3344 49999999999999974 4566667776 6788877 3 4899999
Q ss_pred HHHHHHhcCC
Q 045267 424 KVVKALMEGE 433 (482)
Q Consensus 424 ~ai~~vl~~~ 433 (482)
++|.++++|+
T Consensus 154 ~~i~~l~~~~ 163 (177)
T 2f9f_A 154 DAMKKVSKNP 163 (177)
T ss_dssp HHHHHHHHCT
T ss_pred HHHHHHHhCH
Confidence 9999999887
No 46
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.23 E-value=0.00016 Score=71.92 Aligned_cols=112 Identities=11% Similarity=0.061 Sum_probs=71.6
Q ss_pred eeeccccchh---hhhhccccccccc----ccCchhHHHHhhcCCcEeeccccccchhhHHHHHhhcce-----------
Q 045267 344 MLVPSWAPQA---QVLSHGSTGGFLC----HCGWNSVLESVVNGVPLIAWPLYAEQKMNAVILTEDVKL----------- 405 (482)
Q Consensus 344 v~~~~~ipq~---~lL~~~~~~~~I~----HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~----------- 405 (482)
+.+.+|+|+. .++..++ ++|. -|.-.++.||+++|+|+|+.. .......+.+ -..
T Consensus 256 v~~~g~~~~~~~~~~~~~ad--v~v~pS~~E~~~~~~lEAma~G~PvI~s~----~~g~~e~v~~-~~~~~i~~~~~~~~ 328 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACD--VIVNCSSGEGFGLCSAEGAVLGKPLIISA----VGGADDYFSG-DCVYKIKPSAWISV 328 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCS--EEEECCSCCSSCHHHHHHHTTTCCEEEEC----CHHHHHHSCT-TTSEEECCCEEEEC
T ss_pred eeccCcCCHHHHHHHHHhCC--EEEeCCCcCCCCcHHHHHHHcCCCEEEcC----CCChHHHHcc-Cccccccccccccc
Confidence 6778999954 4677888 5552 234558999999999999864 3345555544 111
Q ss_pred ----ee--eeccCCCCccCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHhhcc
Q 045267 406 ----AL--RPKANENGIVGRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQLASKWNNNE 474 (482)
Q Consensus 406 ----G~--~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~~ 474 (482)
|. .+.. -+.++++++| +++.|+ +.+++ +++..++...+.-+.+..++++.+.+.+..
T Consensus 329 ~~~~G~~gl~~~-----~d~~~la~~i-~l~~~~---~~~~~---~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~ 391 (413)
T 3oy2_A 329 DDRDGIGGIEGI-----IDVDDLVEAF-TFFKDE---KNRKE---YGKRVQDFVKTKPTWDDISSDIIDFFNSLL 391 (413)
T ss_dssp TTTCSSCCEEEE-----CCHHHHHHHH-HHTTSH---HHHHH---HHHHHHHHHTTSCCHHHHHHHHHHHHHHHT
T ss_pred ccccCcceeeCC-----CCHHHHHHHH-HHhcCH---HHHHH---HHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 43 3332 3789999999 999986 33332 333333322245677777777777666543
No 47
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.15 E-value=0.00033 Score=68.96 Aligned_cols=97 Identities=14% Similarity=0.185 Sum_probs=71.9
Q ss_pred Ceeeccccc-hhhhhhccccccccc---c--cCchhHHHHhhcCCcEeeccccccchhhHHHHHhhcceeeeeccCCCCc
Q 045267 343 GMLVPSWAP-QAQVLSHGSTGGFLC---H--CGWNSVLESVVNGVPLIAWPLYAEQKMNAVILTEDVKLALRPKANENGI 416 (482)
Q Consensus 343 ~v~~~~~ip-q~~lL~~~~~~~~I~---H--GG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~ 416 (482)
++.+.++.. -..++..++ +++. . +|..++.||+++|+|+|.-|..++.......+.+ .|.++..
T Consensus 261 ~v~~~~~~~dl~~~y~~aD--v~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~-~G~l~~~------- 330 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGK--IAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEK-EGAGFEV------- 330 (374)
T ss_dssp SEEECCSSSCHHHHGGGEE--EEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHH-TTCEEEC-------
T ss_pred cEEEECCHHHHHHHHHhCC--EEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHH-CCCEEEe-------
Confidence 455556544 466888899 6432 1 3447899999999999987877777777777766 6877765
Q ss_pred cCHHHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHH
Q 045267 417 VGRDEIAKVVKALMEGEQ-GKEVRNKMKDLKDAAA 450 (482)
Q Consensus 417 ~~~~~l~~ai~~vl~~~~-~~~~r~~a~~l~~~~~ 450 (482)
-++++|++++.++++| + .+.+.+++++..+.-.
T Consensus 331 ~d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 331 KNETELVTKLTELLSV-KKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp CSHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHhcc
Confidence 2679999999999988 5 4578888887766544
No 48
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.44 E-value=0.0015 Score=55.66 Aligned_cols=141 Identities=10% Similarity=0.118 Sum_probs=80.9
Q ss_pred cEEEEeccCCCCCCHHHHHHHHHHHHhcCC--ceEEEEeCCCCCCCCcccccCCCCCCCCCCchhHHhhhc--CCCeeec
Q 045267 272 SVLFVSFGSGGTLSCEQLNELALGLEMSEQ--RFLWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFLDRTK--GRGMLVP 347 (482)
Q Consensus 272 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~--~~~v~~~ 347 (482)
+++++..|++. .......++++++.+.. .+-+.+-+... ..+.+.+... +.++.+
T Consensus 2 ~~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~------------------~~~~~~~~~~~~~~~v~~- 60 (166)
T 3qhp_A 2 PFKIAMVGRYS--NEKNQSVLIKAVALSKYKQDIVLLLKGKGP------------------DEKKIKLLAQKLGVKAEF- 60 (166)
T ss_dssp CEEEEEESCCS--TTTTHHHHHHHHHTCTTGGGEEEEEECCST------------------THHHHHHHHHHHTCEEEC-
T ss_pred ceEEEEEeccc--hhcCHHHHHHHHHHhccCCCeEEEEEeCCc------------------cHHHHHHHHHHcCCeEEE-
Confidence 46677777753 23446677778776642 33333332211 1122322221 237778
Q ss_pred cccchh---hhhhccccccccc----ccCchhHHHHhhcCC-cEeeccccccchhhHHHHHhhcceeeeeccCCCCccCH
Q 045267 348 SWAPQA---QVLSHGSTGGFLC----HCGWNSVLESVVNGV-PLIAWPLYAEQKMNAVILTEDVKLALRPKANENGIVGR 419 (482)
Q Consensus 348 ~~ipq~---~lL~~~~~~~~I~----HGG~gs~~eal~~Gv-P~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~ 419 (482)
+|+|+. .++..++ ++|. -|.-.++.||+++|+ |+|+.... ......+.+ .+. .+.. -+.
T Consensus 61 g~~~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~---~~~~~~~~~-~~~--~~~~-----~~~ 127 (166)
T 3qhp_A 61 GFVNSNELLEILKTCT--LYVHAANVESEAIACLEAISVGIVPVIANSPL---SATRQFALD-ERS--LFEP-----NNA 127 (166)
T ss_dssp CCCCHHHHHHHHTTCS--EEEECCCSCCCCHHHHHHHHTTCCEEEECCTT---CGGGGGCSS-GGG--EECT-----TCH
T ss_pred eecCHHHHHHHHHhCC--EEEECCcccCccHHHHHHHhcCCCcEEeeCCC---CchhhhccC-Cce--EEcC-----CCH
Confidence 999864 4678888 5654 344569999999996 99993321 112222223 232 2222 478
Q ss_pred HHHHHHHHHHhcCCc-hHHHHHHHHHHH
Q 045267 420 DEIAKVVKALMEGEQ-GKEVRNKMKDLK 446 (482)
Q Consensus 420 ~~l~~ai~~vl~~~~-~~~~r~~a~~l~ 446 (482)
++++++|.+++.|++ .+.+.+++++..
T Consensus 128 ~~l~~~i~~l~~~~~~~~~~~~~~~~~~ 155 (166)
T 3qhp_A 128 KDLSAKIDWWLENKLERERMQNEYAKSA 155 (166)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 999999999999873 234444444443
No 49
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.32 E-value=0.003 Score=55.58 Aligned_cols=78 Identities=15% Similarity=0.038 Sum_probs=59.3
Q ss_pred Ceee-ccccchh---hhhhcccccccccc----cCchhHHHHhhcCCcEeeccccccchhhHHHHHhhcceeeeeccCCC
Q 045267 343 GMLV-PSWAPQA---QVLSHGSTGGFLCH----CGWNSVLESVVNGVPLIAWPLYAEQKMNAVILTEDVKLALRPKANEN 414 (482)
Q Consensus 343 ~v~~-~~~ipq~---~lL~~~~~~~~I~H----GG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~ 414 (482)
++.+ .+++|+. .++..++ ++|.- |.-.++.||+++|+|+|+... ..+...+ + .+.|..++.
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad--~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~-~~~g~~~~~--- 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVD--FVIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-T-NETGILVKA--- 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCS--EEEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-C-TTTCEEECT---
T ss_pred CEEEEeccCCHHHHHHHHHHCC--EEEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-C-CCceEEecC---
Confidence 8888 9999854 5788888 55532 334688999999999988743 4555555 5 577777764
Q ss_pred CccCHHHHHHHHHHHhc-CC
Q 045267 415 GIVGRDEIAKVVKALME-GE 433 (482)
Q Consensus 415 ~~~~~~~l~~ai~~vl~-~~ 433 (482)
-+.++++++|.++++ |+
T Consensus 165 --~~~~~l~~~i~~l~~~~~ 182 (200)
T 2bfw_A 165 --GDPGELANAILKALELSR 182 (200)
T ss_dssp --TCHHHHHHHHHHHHHCCH
T ss_pred --CCHHHHHHHHHHHHhcCH
Confidence 378999999999998 86
No 50
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.20 E-value=0.0026 Score=65.70 Aligned_cols=139 Identities=13% Similarity=0.054 Sum_probs=89.5
Q ss_pred cEEEEeccCCCCCCHHHHHHHHHHHHhcCCceEEEE--eCCCCCCCCcccccCCCCCCCCCCchhHHhhhcCCCeeeccc
Q 045267 272 SVLFVSFGSGGTLSCEQLNELALGLEMSEQRFLWVV--RSPNNAANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSW 349 (482)
Q Consensus 272 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ 349 (482)
.++|.+|+......++.+....+.+++.+..++|.. +.+.. ....+-+.+....-.+.+++.+.
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g--------------~~~~~~~~~~~~GI~~Rv~F~g~ 506 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNG--------------ITHPYVERFIKSYLGDSATAHPH 506 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCG--------------GGHHHHHHHHHHHHGGGEEEECC
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCch--------------hhHHHHHHHHHcCCCccEEEcCC
Confidence 589999999988899999988888888888877754 32111 00000011111111246778888
Q ss_pred cchhh---hhhcccccccc---cccCchhHHHHhhcCCcEeeccccccc-hhhHHHHHhhcceeee-eccCCCCccCHHH
Q 045267 350 APQAQ---VLSHGSTGGFL---CHCGWNSVLESVVNGVPLIAWPLYAEQ-KMNAVILTEDVKLALR-PKANENGIVGRDE 421 (482)
Q Consensus 350 ipq~~---lL~~~~~~~~I---~HGG~gs~~eal~~GvP~v~~P~~~DQ-~~na~rv~~~~G~G~~-l~~~~~~~~~~~~ 421 (482)
+|..+ .+..+| +|+ ..+|..|++|||.+|||+|..+-..=. ..-+..+.. .|+... +. -+.++
T Consensus 507 ~p~~e~la~y~~aD--IfLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~-~GLpE~LIA------~d~ee 577 (631)
T 3q3e_A 507 SPYHQYLRILHNCD--MMVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKR-LGLPEWLIA------NTVDE 577 (631)
T ss_dssp CCHHHHHHHHHTCS--EEECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHH-TTCCGGGEE------SSHHH
T ss_pred CCHHHHHHHHhcCc--EEEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHh-cCCCcceec------CCHHH
Confidence 88665 447788 554 337889999999999999998743211 112233445 666542 32 36677
Q ss_pred HHHHHHHHhcCC
Q 045267 422 IAKVVKALMEGE 433 (482)
Q Consensus 422 l~~ai~~vl~~~ 433 (482)
..+...++.+|+
T Consensus 578 Yv~~Av~La~D~ 589 (631)
T 3q3e_A 578 YVERAVRLAENH 589 (631)
T ss_dssp HHHHHHHHHHCH
T ss_pred HHHHHHHHhCCH
Confidence 777777888887
No 51
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.93 E-value=0.0023 Score=61.89 Aligned_cols=110 Identities=15% Similarity=0.141 Sum_probs=80.0
Q ss_pred Ceeeccccchhhh---hhcccccccccccCc---------hhHHHHhhcCCcEeeccccccchhhHHHHHhhcceeeeec
Q 045267 343 GMLVPSWAPQAQV---LSHGSTGGFLCHCGW---------NSVLESVVNGVPLIAWPLYAEQKMNAVILTEDVKLALRPK 410 (482)
Q Consensus 343 ~v~~~~~ipq~~l---L~~~~~~~~I~HGG~---------gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~ 410 (482)
||.+.+|+|+.++ |..++.+++.+-+.. +-+.|++++|+|+|+.+ ...++..+++ .|+|..++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~-~~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIEN-NGLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHH-HTCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHh-CCeEEEeC
Confidence 8999999998775 445566565533333 34789999999999754 5678888999 89999885
Q ss_pred cCCCCccCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHH
Q 045267 411 ANENGIVGRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQLASK 469 (482)
Q Consensus 411 ~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~ 469 (482)
+.+++.+++.++. +++.+++++|+++.++++++ |--..+++.+.+.+
T Consensus 290 -------~~~e~~~~i~~l~-~~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~ 336 (339)
T 3rhz_A 290 -------DVEEAIMKVKNVN-EDEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQ 336 (339)
T ss_dssp -------SHHHHHHHHHHCC-HHHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHH
T ss_pred -------CHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHH
Confidence 4578888888764 33356899999999998884 55555555554443
No 52
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=96.88 E-value=0.025 Score=60.40 Aligned_cols=137 Identities=15% Similarity=0.171 Sum_probs=93.5
Q ss_pred CCcEEEEeccCCCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCCCCCcccccCCCCCCCCCCchhHHhhh-----cCCCe
Q 045267 270 LGSVLFVSFGSGGTLSCEQLNELALGLEMSEQRFLWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFLDRT-----KGRGM 344 (482)
Q Consensus 270 ~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~-----~~~~v 344 (482)
+..++|.||......+++.+..-.+-|++.+.-++|.+..+... -+.+.... ....+
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~------------------~~~l~~~~~~~gi~~~r~ 582 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVG------------------EPNIQQYAQNMGLPQNRI 582 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGG------------------HHHHHHHHHHTTCCGGGE
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHH------------------HHHHHHHHHhcCCCcCeE
Confidence 34599999999999999999999999999999999988754220 02232222 34567
Q ss_pred eeccccchhh---hhhccccccccc---ccCchhHHHHhhcCCcEeeccccc-cchhhHHHHHhhcceeeeeccCCCCcc
Q 045267 345 LVPSWAPQAQ---VLSHGSTGGFLC---HCGWNSVLESVVNGVPLIAWPLYA-EQKMNAVILTEDVKLALRPKANENGIV 417 (482)
Q Consensus 345 ~~~~~ipq~~---lL~~~~~~~~I~---HGG~gs~~eal~~GvP~v~~P~~~-DQ~~na~rv~~~~G~G~~l~~~~~~~~ 417 (482)
++.+..|..+ .+..+| +++. .+|.+|++|||..|||+|.+|-.. =-..-+..+.. .|+...+- -
T Consensus 583 ~f~~~~~~~~~l~~~~~~D--i~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~-~gl~e~ia------~ 653 (723)
T 4gyw_A 583 IFSPVAPKEEHVRRGQLAD--VCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTC-LGCLELIA------K 653 (723)
T ss_dssp EEEECCCHHHHHHHGGGCS--EEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHH-HTCGGGBC------S
T ss_pred EECCCCCHHHHHHHhCCCe--EEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHH-cCCccccc------C
Confidence 7888888554 445577 7764 899999999999999999998322 12223445566 77765543 2
Q ss_pred CHHHHHHHHHHHhcCC
Q 045267 418 GRDEIAKVVKALMEGE 433 (482)
Q Consensus 418 ~~~~l~~ai~~vl~~~ 433 (482)
|.++-.+...++-+|+
T Consensus 654 ~~~~Y~~~a~~la~d~ 669 (723)
T 4gyw_A 654 NRQEYEDIAVKLGTDL 669 (723)
T ss_dssp SHHHHHHHHHHHHHCH
T ss_pred CHHHHHHHHHHHhcCH
Confidence 4444444444566665
No 53
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=96.67 E-value=0.068 Score=51.66 Aligned_cols=107 Identities=16% Similarity=0.120 Sum_probs=67.2
Q ss_pred ccCCEEEEEcCCCCCChHHHHHHHHHHHhcC-CCEEEEEcCCCCCCchhhhhhhhcCCCcee-EEEecCCCCCCCcchhh
Q 045267 8 QAAPHIVLLPSPGMGHLIPLIEFAKRLVHRH-HFLVTFFIPSDGPPSEAQKSTLESLPSSIN-SVFLPVSLNDVAEDARA 85 (482)
Q Consensus 8 ~~~~~ili~~~~~~GH~~P~l~La~~L~~r~-GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~ 85 (482)
+..++|+++-....|++.=+.++.++|++++ +.+|++++.+. ...+++..+. ++ ++.++.. +.
T Consensus 6 l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~------~~~l~~~~p~-vd~vi~~~~~------~~-- 70 (349)
T 3tov_A 6 LDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEK------LQQVMEYNPN-IDELIVVDKK------GR-- 70 (349)
T ss_dssp CTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGG------GGGGTSSCTT-CSEEEEECCS------SH--
T ss_pred CCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcc------hhHHHhcCCC-ccEEEEeCcc------cc--
Confidence 3457899999999999999999999998765 79999999873 4444444443 33 4333321 00
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHhhCCCc-cEEEeCCCCccHHHHHHHcCCccEE
Q 045267 86 ETVISLTVLRSLPCLRQELTSLVAKATV-AALVVDLFGTDAFDVAQEFNISPYI 138 (482)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~~~~~~p-D~vi~D~~~~~~~~~A~~lgIP~v~ 138 (482)
...+.. ...+...++ ..++ |++|.-....-...++...|+|..+
T Consensus 71 ~~~~~~-----~~~l~~~Lr----~~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 71 HNSISG-----LNEVAREIN----AKGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp HHHHHH-----HHHHHHHHH----HHCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred cccHHH-----HHHHHHHHh----hCCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 001111 112222333 3489 9999655444456678888999654
No 54
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=95.76 E-value=1 Score=42.86 Aligned_cols=104 Identities=13% Similarity=0.103 Sum_probs=62.4
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcC-CCEEEEEcCCCCCCchhhhhhhhcCCCce-eEEEecCCCCCCCcchhhHHH
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRH-HFLVTFFIPSDGPPSEAQKSTLESLPSSI-NSVFLPVSLNDVAEDARAETV 88 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~-GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~ 88 (482)
|||+++.....|++.=...+.++|++++ +.+|++++.+ ....++...+. + ++..++.. ....
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~------~~~~l~~~~p~-i~~v~~~~~~--~~~~------- 64 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPA------WCRPLLSRMPE-VNEAIPMPLG--HGAL------- 64 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECG------GGHHHHTTCTT-EEEEEEC----------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECc------chhHHHhcCCc-cCEEEEecCC--cccc-------
Confidence 5799999888899998999999997754 7999999987 33344444443 3 23333211 0000
Q ss_pred HHHHHHhhhHHHHHHHHHHhhCCCccEEEeCCCCccHHHHHHHcCCccEE
Q 045267 89 ISLTVLRSLPCLRQELTSLVAKATVAALVVDLFGTDAFDVAQEFNISPYI 138 (482)
Q Consensus 89 ~~~~~~~~~~~l~~~l~~~~~~~~pD~vi~D~~~~~~~~~A~~lgIP~v~ 138 (482)
....+.+.. ..++..+||++|.-....-...++...|+|..+
T Consensus 65 -------~~~~~~~l~-~~l~~~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 65 -------EIGERRKLG-HSLREKRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp -------CHHHHHHHH-HHTTTTTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred -------chHHHHHHH-HHHHhcCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 011112222 234556999999332233455677888999643
No 55
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=93.91 E-value=0.17 Score=46.03 Aligned_cols=46 Identities=20% Similarity=0.122 Sum_probs=30.0
Q ss_pred hhhhccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCC
Q 045267 4 TLQAQAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPP 52 (482)
Q Consensus 4 ~~~~~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~ 52 (482)
+|.++++||||+.-=-+. |.--+.+|+++| +. +|+|+++.|.....
T Consensus 5 ~~~~~~~m~ILlTNDDGi-~apGi~aL~~~l-~~-~~~V~VVAP~~~~S 50 (261)
T 3ty2_A 5 KKTATPKLRLLLSNDDGV-YAKGLAILAKTL-AD-LGEVDVVAPDRNRS 50 (261)
T ss_dssp ------CCEEEEECSSCT-TCHHHHHHHHHH-TT-TSEEEEEEESSCCT
T ss_pred hhccCCCCeEEEEcCCCC-CCHHHHHHHHHH-Hh-cCCEEEEecCCCCc
Confidence 356777899888764443 445578889999 55 89999999886544
No 56
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=93.71 E-value=0.19 Score=49.68 Aligned_cols=79 Identities=14% Similarity=-0.007 Sum_probs=56.4
Q ss_pred CCeeeccccchhh---hhhccccccccc--c-cCc-hhHHHHhhcCCcEeeccccccchhhHHHHHhhcceeeeeccCCC
Q 045267 342 RGMLVPSWAPQAQ---VLSHGSTGGFLC--H-CGW-NSVLESVVNGVPLIAWPLYAEQKMNAVILTEDVKLALRPKANEN 414 (482)
Q Consensus 342 ~~v~~~~~ipq~~---lL~~~~~~~~I~--H-GG~-gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~ 414 (482)
.++.+.+++|+.+ ++..++ +||. . =|. .++.||+++|+|+|+ -..+ ....+++ -..|+.++.
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~ad--v~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~-~~~G~lv~~--- 363 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSS--IGISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNW-HSNIVSLEQ--- 363 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCC--EEECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGT-BTTEEEESS---
T ss_pred CcEEEcCCCCHHHHHHHHHhCC--EEEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhc-CCCEEEeCC---
Confidence 4788899998654 677889 6553 2 133 467999999999998 3222 2233444 456777764
Q ss_pred CccCHHHHHHHHHHHhcCC
Q 045267 415 GIVGRDEIAKVVKALMEGE 433 (482)
Q Consensus 415 ~~~~~~~l~~ai~~vl~~~ 433 (482)
-++++|+++|.++++|+
T Consensus 364 --~d~~~la~ai~~ll~~~ 380 (413)
T 2x0d_A 364 --LNPENIAETLVELCMSF 380 (413)
T ss_dssp --CSHHHHHHHHHHHHHHT
T ss_pred --CCHHHHHHHHHHHHcCH
Confidence 37899999999999887
No 57
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=90.17 E-value=1.4 Score=40.15 Aligned_cols=108 Identities=10% Similarity=0.192 Sum_probs=56.6
Q ss_pred CEEEEEcCCCCCChHH-HHHHHHHHHhcCCCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEec----CCCCCCCcchhh
Q 045267 11 PHIVLLPSPGMGHLIP-LIEFAKRLVHRHHFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLP----VSLNDVAEDARA 85 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P-~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~ 85 (482)
+|||+.-= -|--.| +..|+++|.+. | +|+++.|..+..- .+.-+ .+...+++.... ..+++.|.
T Consensus 2 p~ILlTND--DGi~apGi~~L~~~l~~~-g-~V~VvAP~~~~Sg--~g~si-T~~~pl~~~~~~~~~~~~v~GTPa---- 70 (251)
T 2wqk_A 2 PTFLLVND--DGYFSPGINALREALKSL-G-RVVVVAPDRNLSG--VGHSL-TFTEPLKMRKIDTDFYTVIDGTPA---- 70 (251)
T ss_dssp CEEEEECS--SCTTCHHHHHHHHHHTTT-S-EEEEEEESSCCTT--SCCSC-CCSSCEEEEEEETTEEEETTCCHH----
T ss_pred CEEEEEcC--CCCCcHHHHHHHHHHHhC-C-CEEEEeeCCCCcc--cccCc-CCCCCceeEEeeccceeecCCChH----
Confidence 35666643 333334 77889999766 7 5999988754331 11101 112224444443 11233332
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHhhCCCccEEEeC----------CCCccHH---HHHHHcCCccEEEcc
Q 045267 86 ETVISLTVLRSLPCLRQELTSLVAKATVAALVVD----------LFGTDAF---DVAQEFNISPYIFYP 141 (482)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~~~~~~pD~vi~D----------~~~~~~~---~~A~~lgIP~v~~~~ 141 (482)
+.+.-.+..++...+||+||+. .++.+.. .=|..+|||.+.++-
T Consensus 71 ------------DCV~lal~~~l~~~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 71 ------------DCVHLGYRVILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp ------------HHHHHHHHTTTTTCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred ------------HHHhhhhhhhcCCCCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 1222223444555689999973 3333333 344557999998764
No 58
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=89.84 E-value=1.9 Score=38.98 Aligned_cols=39 Identities=15% Similarity=0.192 Sum_probs=27.9
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCC
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPP 52 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~ 52 (482)
||||+.-=-+. |.--+.+|+++|.+. | +|+++.|.....
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~-g-~V~VVAP~~~~S 40 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSL-G-RVVVVAPDRNLS 40 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTT-S-EEEEEEESSCCT
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhc-C-CEEEEecCCCcc
Confidence 67777664333 444588899999765 7 999999886544
No 59
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=89.83 E-value=6.8 Score=39.91 Aligned_cols=117 Identities=8% Similarity=-0.033 Sum_probs=73.3
Q ss_pred CCCeeeccccchh---hhhhcccccccccc---cCc-hhHHHHhhcCCcEeeccccccchhhHHHHHhhcceeeeeccCC
Q 045267 341 GRGMLVPSWAPQA---QVLSHGSTGGFLCH---CGW-NSVLESVVNGVPLIAWPLYAEQKMNAVILTEDVKLALRPKANE 413 (482)
Q Consensus 341 ~~~v~~~~~ipq~---~lL~~~~~~~~I~H---GG~-gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~ 413 (482)
+.++.+....+.. .++..++ +||.= =|. .++.||+++|+|+|+-. .......+.+ -.-|.......
T Consensus 381 ~~~v~~~~~~~~~~~~~~~~~aD--~~v~PS~~E~fgl~~lEAma~G~PvI~s~----~gG~~e~V~d-g~~G~~~~~~~ 453 (536)
T 3vue_A 381 PGKVRAVVKFNAPLAHLIMAGAD--VLAVPSRFEPCGLIQLQGMRYGTPCACAS----TGGLVDTVIE-GKTGFHMGRLS 453 (536)
T ss_dssp TTTEEEECSCCHHHHHHHHHHCS--EEEECCSCCSSCSHHHHHHHTTCCEEECS----CTHHHHHCCB-TTTEEECCCCC
T ss_pred CCceEEEEeccHHHHHHHHHhhh--eeecccccCCCCHHHHHHHHcCCCEEEcC----CCCchheeeC-CCCccccccCC
Confidence 4577776777653 4678888 66642 233 48899999999999864 4455666666 44555433211
Q ss_pred -CCc----cCHHHHHHHHHHHhc--CCchHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHhhc
Q 045267 414 -NGI----VGRDEIAKVVKALME--GEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQLASKWNNN 473 (482)
Q Consensus 414 -~~~----~~~~~l~~ai~~vl~--~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~ 473 (482)
++. -+++.|+++|++++. +. ..+ ++..++++.+.-|=++.+++..+-++++
T Consensus 454 ~~g~l~~~~d~~~la~ai~ral~~~~~--~~~-------~~~~~~am~~~fSW~~~A~~y~~ly~~L 511 (536)
T 3vue_A 454 VDCKVVEPSDVKKVAATLKRAIKVVGT--PAY-------EEMVRNCMNQDLSWKGPAKNWENVLLGL 511 (536)
T ss_dssp SCTTCCCHHHHHHHHHHHHHHHHHTTS--HHH-------HHHHHHHHHSCCSSHHHHHHHHHHHHTT
T ss_pred CceeEECCCCHHHHHHHHHHHHHhcCc--HHH-------HHHHHHHHHhcCCHHHHHHHHHHHHHHh
Confidence 111 346889999988875 22 122 2233344446677777888888877765
No 60
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=85.07 E-value=2.5 Score=42.56 Aligned_cols=109 Identities=14% Similarity=0.076 Sum_probs=70.4
Q ss_pred ee-eccccchhh---hhhccccccccc---ccCch-hHHHHhhcCC-----cEeeccccccchhhHHHHHhhcceeeeec
Q 045267 344 ML-VPSWAPQAQ---VLSHGSTGGFLC---HCGWN-SVLESVVNGV-----PLIAWPLYAEQKMNAVILTEDVKLALRPK 410 (482)
Q Consensus 344 v~-~~~~ipq~~---lL~~~~~~~~I~---HGG~g-s~~eal~~Gv-----P~v~~P~~~DQ~~na~rv~~~~G~G~~l~ 410 (482)
++ +.+++|+.+ ++..++ +||. .=|+| ++.||+++|+ |+|+--+.+--.. ..-|+.++
T Consensus 333 v~~~~g~v~~~el~~ly~~AD--v~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~--------l~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSD--VGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANE--------LTSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCS--EEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGT--------CTTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHcc--EEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHH--------hCCeEEEC
Confidence 44 468888665 667788 5553 44665 7899999998 6666543321111 11245555
Q ss_pred cCCCCccCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHhhc
Q 045267 411 ANENGIVGRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQLASKWNNN 473 (482)
Q Consensus 411 ~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~ 473 (482)
+ .+.++++++|.++|+++. +.-+++.++..+.+++ -+....++.+++.+.+.
T Consensus 403 p-----~d~~~lA~ai~~lL~~~~-~~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 403 P-----YDRDEVAAALDRALTMSL-AERISRHAEMLDVIVK-----NDINHWQECFISDLKQI 454 (482)
T ss_dssp T-----TCHHHHHHHHHHHHTCCH-HHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHS
T ss_pred C-----CCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHhc
Confidence 4 478999999999998652 1234444555555543 46778889998888765
No 61
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=79.82 E-value=9.8 Score=34.99 Aligned_cols=39 Identities=15% Similarity=0.090 Sum_probs=26.1
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCC
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPP 52 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~ 52 (482)
||||+.-=-+. +.--+..|+++|.+. | +|+++.|..+..
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~-g-~V~VVAP~~~qS 39 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSL-G-DVDVVAPESPKS 39 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGG-S-EEEEEEESSCTT
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhC-C-CEEEEecCCCCc
Confidence 45666543222 333388899999776 7 999999886543
No 62
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=79.33 E-value=9.4 Score=38.32 Aligned_cols=112 Identities=12% Similarity=0.043 Sum_probs=73.4
Q ss_pred Ceeeccccchhh---hhhccccccccc--ccCchh-HHHHhhcC---CcEeeccccccchhhHHHHHhhcceeeeeccCC
Q 045267 343 GMLVPSWAPQAQ---VLSHGSTGGFLC--HCGWNS-VLESVVNG---VPLIAWPLYAEQKMNAVILTEDVKLALRPKANE 413 (482)
Q Consensus 343 ~v~~~~~ipq~~---lL~~~~~~~~I~--HGG~gs-~~eal~~G---vP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~ 413 (482)
.|++.+.+|+.+ ++..+++ ++++ +=|+|. ..||+++| .|+|+--+.+ .+..+.+ -|+.+++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv-~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~~---~allVnP-- 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL-LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLGE---YCRSVNP-- 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE-EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHGG---GSEEECT--
T ss_pred CEEEeCCCCHHHHHHHHHhccE-EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhCC---CEEEECC--
Confidence 477777888644 5666774 2222 568885 58999996 6666553332 2222212 3566665
Q ss_pred CCccCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHhhc
Q 045267 414 NGIVGRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQLASKWNNN 473 (482)
Q Consensus 414 ~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~ 473 (482)
.+.+.++++|.++|+++. ++-+++.+++.+.+++ -....-++.|++.|...
T Consensus 423 ---~D~~~lA~AI~~aL~m~~-~er~~r~~~~~~~V~~-----~d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 423 ---FDLVEQAEAISAALAAGP-RQRAEAAARRRDAARP-----WTLEAWVQAQLDGLAAD 473 (496)
T ss_dssp ---TBHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHTT-----CBHHHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHhhc
Confidence 478999999999998762 2455566666666653 56678888888888764
No 63
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=78.39 E-value=9.4 Score=34.56 Aligned_cols=39 Identities=23% Similarity=0.227 Sum_probs=26.4
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCC
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPP 52 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~ 52 (482)
||||+.-=-+. |.--+..|+++|.+. | +|+++.|.....
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~-g-~V~VVAP~~~~S 40 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREF-A-DVQVVAPDRNRS 40 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTT-S-EEEEEEESSCCT
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhC-C-cEEEEeeCCCCc
Confidence 57776653333 334478899999654 5 999999886544
No 64
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=78.03 E-value=5.7 Score=35.77 Aligned_cols=33 Identities=6% Similarity=-0.060 Sum_probs=26.1
Q ss_pred EEEEcCCC-CCChHHHHHHHHHHHhcCCCEEEEEc
Q 045267 13 IVLLPSPG-MGHLIPLIEFAKRLVHRHHFLVTFFI 46 (482)
Q Consensus 13 ili~~~~~-~GH~~P~l~La~~L~~r~GH~Vt~~~ 46 (482)
|.|.+..+ -|=..-.+.|++.|.++ |.+|.++=
T Consensus 24 i~ItgT~t~vGKT~vs~gL~~~L~~~-G~~V~~fK 57 (242)
T 3qxc_A 24 LFISATNTNAGKTTCARLLAQYCNAC-GVKTILLK 57 (242)
T ss_dssp EEEEESSTTSSHHHHHHHHHHHHHHT-TCCEEEEC
T ss_pred EEEEeCCCCCcHHHHHHHHHHHHHhC-CCceEEEe
Confidence 44444433 39999999999999888 99999994
No 65
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=78.01 E-value=1.7 Score=44.46 Aligned_cols=46 Identities=13% Similarity=0.062 Sum_probs=29.0
Q ss_pred CchhhhhccCCEEEEEcCC------CCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 1 MEQTLQAQAAPHIVLLPSP------GMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 1 ~~~~~~~~~~~~ili~~~~------~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
|++|- +-.+|||+++++- +.|=-.-.-+|.++|+++ ||+|++++|.
T Consensus 1 ~~~~~-~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~-G~~V~Vi~P~ 52 (536)
T 3vue_A 1 MAHHH-HHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAAN-GHRVMVISPR 52 (536)
T ss_dssp --------CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTT-TCEEEEEEEC
T ss_pred CCccc-CCCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHc-CCeEEEEecC
Confidence 44433 3346899999752 122223466899999888 9999999964
No 66
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=77.69 E-value=7.1 Score=31.76 Aligned_cols=35 Identities=14% Similarity=0.033 Sum_probs=28.6
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCC
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSD 49 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~ 49 (482)
.+++++..|+ =+.|++++++.|.++ |.+|+++ ...
T Consensus 19 ~~~llIaGG~--GiaPl~sm~~~l~~~-~~~v~l~-g~R 53 (142)
T 3lyu_A 19 GKILAIGAYT--GIVEVYPIAKAWQEI-GNDVTTL-HVT 53 (142)
T ss_dssp SEEEEEEETT--HHHHHHHHHHHHHHT-TCEEEEE-EEE
T ss_pred CeEEEEECcC--cHHHHHHHHHHHHhc-CCcEEEE-EeC
Confidence 4688877665 489999999999887 9999998 543
No 67
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=76.98 E-value=21 Score=31.38 Aligned_cols=34 Identities=15% Similarity=0.091 Sum_probs=22.7
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcCCC--EEEEEcCC
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRHHF--LVTFFIPS 48 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~GH--~Vt~~~~~ 48 (482)
+||+|+.+|+.. -+.++.++|.+. +| +|..+.+.
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~~-~~~~~i~~Vvs~ 37 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIESG-KVNASIELVISD 37 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHTT-SSCEEEEEEEES
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHhC-CCCCeEEEEEeC
Confidence 478888776653 366677788665 77 77666543
No 68
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=76.38 E-value=12 Score=39.07 Aligned_cols=42 Identities=19% Similarity=0.224 Sum_probs=30.2
Q ss_pred eeccccch---------hhhhhcccccccccc---cCc-hhHHHHhhcCCcEeeccc
Q 045267 345 LVPSWAPQ---------AQVLSHGSTGGFLCH---CGW-NSVLESVVNGVPLIAWPL 388 (482)
Q Consensus 345 ~~~~~ipq---------~~lL~~~~~~~~I~H---GG~-gs~~eal~~GvP~v~~P~ 388 (482)
.+..|++. .+++..++ +||.- =|+ .+..||+++|+|+|+--.
T Consensus 496 f~P~~L~~~d~lf~~d~~~~~~~ad--vfV~PS~~EgfGl~~LEAmA~G~PvI~s~~ 550 (725)
T 3nb0_A 496 FHPEFLNANNPILGLDYDEFVRGCH--LGVFPSYYEPWGYTPAECTVMGVPSITTNV 550 (725)
T ss_dssp ECCSCCCTTCSSSCCCHHHHHHHCS--EEECCCSSBSSCHHHHHHHHTTCCEEEETT
T ss_pred EeccccCCCCccchhHHHHHHhhce--EEEeccccCCCCHHHHHHHHcCCCEEEeCC
Confidence 44577765 35788899 66533 344 488999999999998644
No 69
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=75.92 E-value=1.2 Score=43.74 Aligned_cols=40 Identities=10% Similarity=0.235 Sum_probs=30.8
Q ss_pred cCCEEEEEcCCC-----CCChHHHHHHHHHHHhcCCCEEEEEcCCC
Q 045267 9 AAPHIVLLPSPG-----MGHLIPLIEFAKRLVHRHHFLVTFFIPSD 49 (482)
Q Consensus 9 ~~~~ili~~~~~-----~GH~~P~l~La~~L~~r~GH~Vt~~~~~~ 49 (482)
.+|||++++... .|=......+|++|+++ ||+|++++...
T Consensus 45 ~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~-GheV~Vvt~~~ 89 (413)
T 2x0d_A 45 KGKRLNLLVPSINQEHMFGGISTALKLFEQFDNK-KFKKRIILTDA 89 (413)
T ss_dssp CSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTT-TCEEEEEESSC
T ss_pred CCceEEEEeCCCCccccccHHHHHHHHHHHHHHc-CCceEEEEecC
Confidence 457888887542 13345689999999888 99999999864
No 70
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=75.31 E-value=27 Score=31.03 Aligned_cols=108 Identities=9% Similarity=0.007 Sum_probs=54.5
Q ss_pred cCCEEEEEcCCCCCChHHHHHHHHHHHhcC-CCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEec-CCCCCCCcchhhH
Q 045267 9 AAPHIVLLPSPGMGHLIPLIEFAKRLVHRH-HFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLP-VSLNDVAEDARAE 86 (482)
Q Consensus 9 ~~~~ili~~~~~~GH~~P~l~La~~L~~r~-GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~ 86 (482)
++|||+|+.+|+.. -+.++.++|.+.. +++|..+.+..... ....... ..++.+..++ ..... .
T Consensus 21 ~~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~--~~~~~A~--~~gIp~~~~~~~~~~~-------r 86 (229)
T 3auf_A 21 HMIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADA--YGLERAR--RAGVDALHMDPAAYPS-------R 86 (229)
T ss_dssp TCEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTC--HHHHHHH--HTTCEEEECCGGGSSS-------H
T ss_pred CCcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCch--HHHHHHH--HcCCCEEEECcccccc-------h
Confidence 34689999877743 3566677775432 47886665442212 1111122 2256555443 11110 0
Q ss_pred HHHHHHHHhhhHHHHHHHHHHhhCCCccEEEeCCC-CccHHHHHHHcCCccEEEcc
Q 045267 87 TVISLTVLRSLPCLRQELTSLVAKATVAALVVDLF-GTDAFDVAQEFNISPYIFYP 141 (482)
Q Consensus 87 ~~~~~~~~~~~~~l~~~l~~~~~~~~pD~vi~D~~-~~~~~~~A~~lgIP~v~~~~ 141 (482)
+.+.+.+.+.+++.+||+||+-.+ ..-...+-+.....++-+++
T Consensus 87 -----------~~~~~~~~~~l~~~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHp 131 (229)
T 3auf_A 87 -----------TAFDAALAERLQAYGVDLVCLAGYMRLVRGPMLTAFPNRILNIHP 131 (229)
T ss_dssp -----------HHHHHHHHHHHHHTTCSEEEESSCCSCCCHHHHHHSTTCEEEEES
T ss_pred -----------hhccHHHHHHHHhcCCCEEEEcChhHhCCHHHHhhccCCEEEEcc
Confidence 111122233334559999997654 33344455555556666555
No 71
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=75.27 E-value=10 Score=34.24 Aligned_cols=39 Identities=21% Similarity=0.267 Sum_probs=25.8
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCC
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPP 52 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~ 52 (482)
||||+.-=-+. |.--+..|+++|.+. | +|+++.|..+..
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~-g-~V~VVAP~~~~S 39 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEE-H-EVFVVAPDKERS 39 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTT-S-EEEEEEESSCCT
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhC-C-CEEEEecCCCCc
Confidence 45666543222 333388899999765 7 899999886544
No 72
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=74.29 E-value=22 Score=30.67 Aligned_cols=102 Identities=14% Similarity=0.168 Sum_probs=58.4
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCC-CCchhhhhhhhcCCCceeEEEecCCCCCCCcchhhHHHH
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDG-PPSEAQKSTLESLPSSINSVFLPVSLNDVAEDARAETVI 89 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 89 (482)
-.|++++..+.|-..-.+.+|.....+ |++|.|+..-.. ... .-..++..+ ++.+......+ .-.....
T Consensus 29 g~i~v~tG~GkGKTTaA~GlalRA~g~-G~rV~~vQF~Kg~~~~-gE~~~l~~L--~v~~~~~g~gf---~~~~~~~--- 98 (196)
T 1g5t_A 29 GIIIVFTGNGKGKTTAAFGTAARAVGH-GKNVGVVQFIKGTWPN-GERNLLEPH--GVEFQVMATGF---TWETQNR--- 98 (196)
T ss_dssp CCEEEEESSSSCHHHHHHHHHHHHHHT-TCCEEEEESSCCSSCC-HHHHHHGGG--TCEEEECCTTC---CCCGGGH---
T ss_pred ceEEEECCCCCCHHHHHHHHHHHHHHC-CCeEEEEEeeCCCCCc-cHHHHHHhC--CcEEEEccccc---ccCCCCc---
Confidence 358888888899999999999999887 999999964321 110 111223333 25555555211 1111000
Q ss_pred HHHHHhhhHHHHHHHHHHhhCCCccEEEeCCCCc
Q 045267 90 SLTVLRSLPCLRQELTSLVAKATVAALVVDLFGT 123 (482)
Q Consensus 90 ~~~~~~~~~~l~~~l~~~~~~~~pD~vi~D~~~~ 123 (482)
..........+.. .++.+.+.++|+||.|-+.+
T Consensus 99 ~~~~~~a~~~l~~-a~~~l~~~~yDlvILDEi~~ 131 (196)
T 1g5t_A 99 EADTAACMAVWQH-GKRMLADPLLDMVVLDELTY 131 (196)
T ss_dssp HHHHHHHHHHHHH-HHHHTTCTTCSEEEEETHHH
T ss_pred HHHHHHHHHHHHH-HHHHHhcCCCCEEEEeCCCc
Confidence 1111112223322 33445667999999998644
No 73
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=73.49 E-value=4.4 Score=32.89 Aligned_cols=40 Identities=15% Similarity=-0.054 Sum_probs=34.8
Q ss_pred ccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 8 QAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 8 ~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
|++.+|++.+.+..+|-....-++..|..+ |++|.++...
T Consensus 1 ~~~~~vvla~~~~d~HdiG~~~v~~~l~~~-G~~Vi~lG~~ 40 (137)
T 1ccw_A 1 MEKKTIVLGVIGSDCHAVGNKILDHAFTNA-GFNVVNIGVL 40 (137)
T ss_dssp CCCCEEEEEEETTCCCCHHHHHHHHHHHHT-TCEEEEEEEE
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHHHHHHC-CCEEEECCCC
Confidence 456789999999999999999999999776 9999988753
No 74
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=72.13 E-value=9 Score=31.78 Aligned_cols=37 Identities=14% Similarity=-0.039 Sum_probs=29.6
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCC
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGP 51 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~ 51 (482)
.+++++..|+. +.|++++++.|.++ |.+|+++ .....
T Consensus 24 ~~~llIaGG~G--ItPl~sm~~~l~~~-~~~v~l~-g~r~~ 60 (158)
T 3lrx_A 24 GKILAIGAYTG--IVEVYPIAKAWQEI-GNDVTTL-HVTFE 60 (158)
T ss_dssp SEEEEEEETTH--HHHHHHHHHHHHHH-TCEEEEE-EECBG
T ss_pred CeEEEEEccCc--HHHHHHHHHHHHhc-CCcEEEE-EeCCH
Confidence 46888876653 99999999999887 9999999 65433
No 75
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=72.08 E-value=19 Score=31.82 Aligned_cols=48 Identities=21% Similarity=0.172 Sum_probs=30.3
Q ss_pred CchhhhhccC-CEEEEEcCC-CCCChHHHHHHHHHHHhcCCCEEEEEcCCC
Q 045267 1 MEQTLQAQAA-PHIVLLPSP-GMGHLIPLIEFAKRLVHRHHFLVTFFIPSD 49 (482)
Q Consensus 1 ~~~~~~~~~~-~~ili~~~~-~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~ 49 (482)
|++.|..... -.+.+++.+ +.|=..-++.++..+..+ |.+|.++.+..
T Consensus 1 ~~~~~~~~~~~G~i~litG~mGsGKTT~ll~~~~r~~~~-g~kVli~~~~~ 50 (223)
T 2b8t_A 1 MAKVNAFSKKIGWIEFITGPMFAGKTAELIRRLHRLEYA-DVKYLVFKPKI 50 (223)
T ss_dssp ----------CCEEEEEECSTTSCHHHHHHHHHHHHHHT-TCCEEEEEECC
T ss_pred CchhhhhccCCcEEEEEECCCCCcHHHHHHHHHHHHHhc-CCEEEEEEecc
Confidence 4455532222 235555554 889999999999999888 99999997653
No 76
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=68.84 E-value=20 Score=30.56 Aligned_cols=36 Identities=22% Similarity=0.368 Sum_probs=29.1
Q ss_pred EEEE-cCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCC
Q 045267 13 IVLL-PSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSD 49 (482)
Q Consensus 13 ili~-~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~ 49 (482)
|+++ +-|+.|-..-...||..|+++ |++|.++-...
T Consensus 4 i~v~s~kgG~GKTt~a~~la~~la~~-g~~vlliD~D~ 40 (206)
T 4dzz_A 4 ISFLNPKGGSGKTTAVINIATALSRS-GYNIAVVDTDP 40 (206)
T ss_dssp EEECCSSTTSSHHHHHHHHHHHHHHT-TCCEEEEECCT
T ss_pred EEEEeCCCCccHHHHHHHHHHHHHHC-CCeEEEEECCC
Confidence 4454 336679999999999999987 99999997654
No 77
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=68.42 E-value=24 Score=31.80 Aligned_cols=34 Identities=12% Similarity=0.014 Sum_probs=26.7
Q ss_pred EEEEEcCCCC-CChHHHHHHHHHHHhcCCCEEEEEc
Q 045267 12 HIVLLPSPGM-GHLIPLIEFAKRLVHRHHFLVTFFI 46 (482)
Q Consensus 12 ~ili~~~~~~-GH~~P~l~La~~L~~r~GH~Vt~~~ 46 (482)
.|.|....+. |=..-.+.|++.|.++ |++|.++=
T Consensus 28 ~i~Itgt~t~vGKT~vt~gL~~~l~~~-G~~V~~fK 62 (251)
T 3fgn_A 28 ILVVTGTGTGVGKTVVCAALASAARQA-GIDVAVCK 62 (251)
T ss_dssp EEEEEESSTTSCHHHHHHHHHHHHHHT-TCCEEEEE
T ss_pred EEEEEeCCCCCcHHHHHHHHHHHHHHC-CCeEEEEe
Confidence 3444444433 9999999999999888 99999984
No 78
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=68.28 E-value=12 Score=36.55 Aligned_cols=33 Identities=6% Similarity=0.034 Sum_probs=21.1
Q ss_pred HHHHhhCCCccEEEe--CCCCccHHHHHHHcCCcc
Q 045267 104 LTSLVAKATVAALVV--DLFGTDAFDVAQEFNISP 136 (482)
Q Consensus 104 l~~~~~~~~pD~vi~--D~~~~~~~~~A~~lgIP~ 136 (482)
+.++.++.++|.|+. |.....+..+|+.+|+|.
T Consensus 67 ~~~~~~~~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 67 VRQTFVEFPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp HHHHHHHSCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred HHHhhhhcCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 334444568999984 333334456889999993
No 79
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=66.21 E-value=14 Score=32.74 Aligned_cols=145 Identities=11% Similarity=-0.017 Sum_probs=77.3
Q ss_pred CcEEEEeccCCCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCCCCCcccccCCCCCCCCCCchhHHhhhcCCCeeecccc
Q 045267 271 GSVLFVSFGSGGTLSCEQLNELALGLEMSEQRFLWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWA 350 (482)
Q Consensus 271 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~i 350 (482)
++++.|+.|.+ ....+..|...|..+.++... +.+.+.+.....++.+....
T Consensus 32 k~VLVVGgG~v-------a~~ka~~Ll~~GA~VtVvap~---------------------~~~~l~~l~~~~~i~~i~~~ 83 (223)
T 3dfz_A 32 RSVLVVGGGTI-------ATRRIKGFLQEGAAITVVAPT---------------------VSAEINEWEAKGQLRVKRKK 83 (223)
T ss_dssp CCEEEECCSHH-------HHHHHHHHGGGCCCEEEECSS---------------------CCHHHHHHHHTTSCEEECSC
T ss_pred CEEEEECCCHH-------HHHHHHHHHHCCCEEEEECCC---------------------CCHHHHHHHHcCCcEEEECC
Confidence 56888887742 334555666778887766432 11223322222334332222
Q ss_pred chhhhhhcccccccccccCchhHHHHhh----cCCcEeeccccccchhhH-----HHHHhhcceeeeeccCCCCccCHHH
Q 045267 351 PQAQVLSHGSTGGFLCHCGWNSVLESVV----NGVPLIAWPLYAEQKMNA-----VILTEDVKLALRPKANENGIVGRDE 421 (482)
Q Consensus 351 pq~~lL~~~~~~~~I~HGG~gs~~eal~----~GvP~v~~P~~~DQ~~na-----~rv~~~~G~G~~l~~~~~~~~~~~~ 421 (482)
-+.+.|..++ ++|.--|.-.+.+.++ .|+|+-++ |.+..+ ..+.+ -++-+.+..+.....-...
T Consensus 84 ~~~~dL~~ad--LVIaAT~d~~~N~~I~~~ak~gi~VNvv----D~p~~~~f~~Paiv~r-g~l~iaIST~G~sP~la~~ 156 (223)
T 3dfz_A 84 VGEEDLLNVF--FIVVATNDQAVNKFVKQHIKNDQLVNMA----SSFSDGNIQIPAQFSR-GRLSLAISTDGASPLLTKR 156 (223)
T ss_dssp CCGGGSSSCS--EEEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEE-TTEEEEEECTTSCHHHHHH
T ss_pred CCHhHhCCCC--EEEECCCCHHHHHHHHHHHhCCCEEEEe----CCcccCeEEEeeEEEe-CCEEEEEECCCCCcHHHHH
Confidence 2344566777 8887777665555444 45554332 443332 22233 3444444443311233577
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 045267 422 IAKVVKALMEGEQGKEVRNKMKDLKDAAAA 451 (482)
Q Consensus 422 l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~ 451 (482)
|++.|.+.+- +....+-+.+.++++++++
T Consensus 157 iR~~ie~~lp-~~~~~~~~~~~~~R~~vk~ 185 (223)
T 3dfz_A 157 IKEDLSSNYD-ESYTQYTQFLYECRVLIHR 185 (223)
T ss_dssp HHHHHHHHSC-THHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcc-HHHHHHHHHHHHHHHHHHH
Confidence 8888888774 3334778888888888886
No 80
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=66.06 E-value=3.2 Score=34.16 Aligned_cols=35 Identities=17% Similarity=0.112 Sum_probs=27.0
Q ss_pred ccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 8 QAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 8 ~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
|.++||+++..|..| ..+++.|.++ ||+|+++...
T Consensus 1 ~~~~~vlI~G~G~vG-----~~la~~L~~~-g~~V~vid~~ 35 (153)
T 1id1_A 1 HRKDHFIVCGHSILA-----INTILQLNQR-GQNVTVISNL 35 (153)
T ss_dssp CCCSCEEEECCSHHH-----HHHHHHHHHT-TCCEEEEECC
T ss_pred CCCCcEEEECCCHHH-----HHHHHHHHHC-CCCEEEEECC
Confidence 556789998654444 6789999887 9999999754
No 81
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=65.58 E-value=22 Score=31.85 Aligned_cols=39 Identities=15% Similarity=0.075 Sum_probs=25.9
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCC
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPP 52 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~ 52 (482)
||||+.-=-+. |.--+..|+++|.+. | +|+++.|..+..
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~-g-~V~VVAP~~~~S 39 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQF-G-EVFVAAPDTEQS 39 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTT-S-EEEEEEECSSCC
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhC-C-CEEEEecCCCCc
Confidence 45666543222 333388899999765 7 899999886544
No 82
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=65.31 E-value=20 Score=35.41 Aligned_cols=40 Identities=18% Similarity=0.257 Sum_probs=35.0
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCC
Q 045267 12 HIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPP 52 (482)
Q Consensus 12 ~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~ 52 (482)
-+++..-|+.|-..=.+.+|...+.+ |..|.|++.+...+
T Consensus 199 liiIaG~pG~GKTtlal~ia~~~a~~-g~~vl~fSlEms~~ 238 (444)
T 3bgw_A 199 FVLIAARPSMGKTAFALKQAKNMSDN-DDVVNLHSLEMGKK 238 (444)
T ss_dssp EEEEEECSSSSHHHHHHHHHHHHHHT-TCEEEEECSSSCTT
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHc-CCEEEEEECCCCHH
Confidence 48888889999999999999999888 99999999875444
No 83
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=63.78 E-value=65 Score=28.03 Aligned_cols=106 Identities=4% Similarity=0.009 Sum_probs=52.6
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcC-CCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEec-CCCCCCCcchhhHHH
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRH-HFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLP-VSLNDVAEDARAETV 88 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~-GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~ 88 (482)
+||+++.+|+.+- +.++.++|.+.. +|+|..+.+..... ....... ..|+.+..++ .....
T Consensus 4 ~ki~vl~sG~g~~---~~~~l~~l~~~~l~~~I~~Vit~~~~~--~v~~~A~--~~gIp~~~~~~~~~~~---------- 66 (212)
T 3av3_A 4 KRLAVFASGSGTN---FQAIVDAAKRGDLPARVALLVCDRPGA--KVIERAA--RENVPAFVFSPKDYPS---------- 66 (212)
T ss_dssp EEEEEECCSSCHH---HHHHHHHHHTTCCCEEEEEEEESSTTC--HHHHHHH--HTTCCEEECCGGGSSS----------
T ss_pred cEEEEEEECCcHH---HHHHHHHHHhCCCCCeEEEEEeCCCCc--HHHHHHH--HcCCCEEEeCcccccc----------
Confidence 4688887776443 556667775432 58887766542212 1111112 2245544433 11110
Q ss_pred HHHHHHhhhHHHHHHHHHHhhCCCccEEEeCCC-CccHHHHHHHcCCccEEEcc
Q 045267 89 ISLTVLRSLPCLRQELTSLVAKATVAALVVDLF-GTDAFDVAQEFNISPYIFYP 141 (482)
Q Consensus 89 ~~~~~~~~~~~l~~~l~~~~~~~~pD~vi~D~~-~~~~~~~A~~lgIP~v~~~~ 141 (482)
.+.+.+.+.+.+++.+||+||+-.+ ..-...+-+.....++-+++
T Consensus 67 --------~~~~~~~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHp 112 (212)
T 3av3_A 67 --------KAAFESEILRELKGRQIDWIALAGYMRLIGPTLLSAYEGKIVNIHP 112 (212)
T ss_dssp --------HHHHHHHHHHHHHHTTCCEEEESSCCSCCCHHHHHHTTTCEEEEES
T ss_pred --------hhhhHHHHHHHHHhcCCCEEEEchhhhhCCHHHHhhhcCCEEEEec
Confidence 0111122223334569999997654 33344555555566666555
No 84
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=63.37 E-value=47 Score=31.39 Aligned_cols=40 Identities=10% Similarity=0.140 Sum_probs=32.8
Q ss_pred cCCEEEEEcC-CCCCChHHHHHHHHHHHhcCCCEEEEEcCCC
Q 045267 9 AAPHIVLLPS-PGMGHLIPLIEFAKRLVHRHHFLVTFFIPSD 49 (482)
Q Consensus 9 ~~~~ili~~~-~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~ 49 (482)
++++|++++. |+.|-..-...||..|+++ |++|.++..+.
T Consensus 24 ~~~~i~v~sgKGGvGKTTvA~~LA~~lA~~-G~rVLlvD~D~ 64 (349)
T 3ug7_A 24 DGTKYIMFGGKGGVGKTTMSAATGVYLAEK-GLKVVIVSTDP 64 (349)
T ss_dssp CSCEEEEEECSSSTTHHHHHHHHHHHHHHS-SCCEEEEECCT
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 3455666555 6679999999999999988 99999999876
No 85
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=61.89 E-value=22 Score=33.01 Aligned_cols=39 Identities=5% Similarity=0.185 Sum_probs=34.6
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcC-CCEEEEEcCCC
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRH-HFLVTFFIPSD 49 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~-GH~Vt~~~~~~ 49 (482)
|||+++-....|++.=..++.++|++++ +.+|++++.+.
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~ 40 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEG 40 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGG
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehh
Confidence 5799999999999999999999998765 79999999874
No 86
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=61.02 E-value=12 Score=34.92 Aligned_cols=131 Identities=14% Similarity=0.047 Sum_probs=71.3
Q ss_pred CcEEEEeccCC---CCCCHHHHHHHHHHHHhcCCceEEEEeCCCCCCCCcccccCCCCCCCCCCchhHHhhhcCCCeeec
Q 045267 271 GSVLFVSFGSG---GTLSCEQLNELALGLEMSEQRFLWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVP 347 (482)
Q Consensus 271 ~~~v~vs~GS~---~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~ 347 (482)
++.|.+.-|+. ...+.+.+.++++.|...+.++++..+.+.. ..+-+.+.+. .+++.+.
T Consensus 178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e----------------~~~~~~i~~~--~~~~~l~ 239 (326)
T 2gt1_A 178 GEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHE----------------EERAKRLAEG--FAYVEVL 239 (326)
T ss_dssp TSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHH----------------HHHHHHHHTT--CTTEEEC
T ss_pred CCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHH----------------HHHHHHHHhh--CCccccc
Confidence 45777777764 3456677777777776556665544332110 0000111111 1233333
Q ss_pred ccc---chhhhhhcccccccccc-cCchhHHHHhhcCCcEeec--cccccchhhHHHHHhhccee-eee-----ccCCCC
Q 045267 348 SWA---PQAQVLSHGSTGGFLCH-CGWNSVLESVVNGVPLIAW--PLYAEQKMNAVILTEDVKLA-LRP-----KANENG 415 (482)
Q Consensus 348 ~~i---pq~~lL~~~~~~~~I~H-GG~gs~~eal~~GvP~v~~--P~~~DQ~~na~rv~~~~G~G-~~l-----~~~~~~ 415 (482)
+-. .-.+++.+++ ++|+. .| +++=|.+.|+|+|++ |. |- .+-.= .|-. ..+ ..++
T Consensus 240 g~~sl~el~ali~~a~--l~I~~DSG--~~HlAaa~g~P~v~lfg~t--~p----~~~~P-~~~~~~~~~~~~~cm~~-- 306 (326)
T 2gt1_A 240 PKMSLEGVARVLAGAK--FVVSVDTG--LSHLTAALDRPNITVYGPT--DP----GLIGG-YGKNQMVCRAPGNELSQ-- 306 (326)
T ss_dssp CCCCHHHHHHHHHTCS--EEEEESSH--HHHHHHHTTCCEEEEESSS--CH----HHHCC-CSSSEEEEECGGGCGGG--
T ss_pred CCCCHHHHHHHHHhCC--EEEecCCc--HHHHHHHcCCCEEEEECCC--Ch----hhcCC-CCCCceEecCCcccccC--
Confidence 322 2466889999 99987 44 445577799999988 32 10 11000 1111 111 1234
Q ss_pred ccCHHHHHHHHHHHhcCC
Q 045267 416 IVGRDEIAKVVKALMEGE 433 (482)
Q Consensus 416 ~~~~~~l~~ai~~vl~~~ 433 (482)
++++++.+++.++|++.
T Consensus 307 -I~~~~V~~~i~~~l~~~ 323 (326)
T 2gt1_A 307 -LTANAVKQFIEENAEKA 323 (326)
T ss_dssp -CCHHHHHHHHHHTTTTC
T ss_pred -CCHHHHHHHHHHHHHHh
Confidence 89999999999999753
No 87
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=60.88 E-value=26 Score=30.59 Aligned_cols=111 Identities=8% Similarity=0.031 Sum_probs=53.4
Q ss_pred hccCCEEEEEcCCCCCChHHHHHHHHHHHhc-CCCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEecCCCCCCCcchhh
Q 045267 7 AQAAPHIVLLPSPGMGHLIPLIEFAKRLVHR-HHFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLPVSLNDVAEDARA 85 (482)
Q Consensus 7 ~~~~~~ili~~~~~~GH~~P~l~La~~L~~r-~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 85 (482)
.|.++||+++.+|..+. +.+|.+++.+. ..++|..+.+....... ..... ..|+.+..++.. .+..
T Consensus 4 ~m~~~ri~vl~SG~gsn---l~all~~~~~~~l~~~I~~Visn~~~a~~--l~~A~--~~gIp~~~~~~~--~~~~---- 70 (209)
T 4ds3_A 4 SMKRNRVVIFISGGGSN---MEALIRAAQAPGFPAEIVAVFSDKAEAGG--LAKAE--AAGIATQVFKRK--DFAS---- 70 (209)
T ss_dssp --CCEEEEEEESSCCHH---HHHHHHHHTSTTCSEEEEEEEESCTTCTH--HHHHH--HTTCCEEECCGG--GSSS----
T ss_pred cCCCccEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEECCcccHH--HHHHH--HcCCCEEEeCcc--ccCC----
Confidence 46677899988777554 44555666432 02688877764221110 01111 224555444411 1010
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHhhCCCccEEEeCCCC-ccHHHHHHHcCCccEEEcc
Q 045267 86 ETVISLTVLRSLPCLRQELTSLVAKATVAALVVDLFG-TDAFDVAQEFNISPYIFYP 141 (482)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~~~~~~pD~vi~D~~~-~~~~~~A~~lgIP~v~~~~ 141 (482)
. ....+.+.+.+++ .+||+||+-.+. .-...+-+...-.++-+++
T Consensus 71 r-------~~~d~~~~~~l~~----~~~Dliv~agy~~il~~~~l~~~~~~~iNiHp 116 (209)
T 4ds3_A 71 K-------EAHEDAILAALDV----LKPDIICLAGYMRLLSGRFIAPYEGRILNIHP 116 (209)
T ss_dssp H-------HHHHHHHHHHHHH----HCCSEEEESSCCSCCCHHHHGGGTTCEEEEES
T ss_pred H-------HHHHHHHHHHHHh----cCCCEEEEeccccCcCHHHHhhccCCeEEECC
Confidence 0 0112334444444 499999976543 3334455555555565554
No 88
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=60.40 E-value=5.8 Score=32.51 Aligned_cols=36 Identities=14% Similarity=0.217 Sum_probs=29.3
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 12 HIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 12 ~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
-.+++..+..-.+++.+.+|...++. |++|+++...
T Consensus 10 l~II~~sg~~d~~~~a~~lA~~Aaa~-g~eV~iF~t~ 45 (144)
T 2qs7_A 10 LSIIVFSGTIDKLMPVGILTSGAAAS-GYEVNLFFTF 45 (144)
T ss_dssp EEEEECCCSHHHHHHHHHHHHHHHHT-TCEEEEEECH
T ss_pred EEEEEEcCCHHHHHHHHHHHHHHHHc-CCcEEEEEeh
Confidence 35555556678899999999999887 9999999765
No 89
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=59.66 E-value=48 Score=28.99 Aligned_cols=109 Identities=13% Similarity=0.100 Sum_probs=54.2
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEecCCCCCCCcchhhHHHH
Q 045267 10 APHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLPVSLNDVAEDARAETVI 89 (482)
Q Consensus 10 ~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 89 (482)
++||+++.+|..+.+..++ ++..+..+++|..+.+...... ...... ..|+.+..++.. ..+.
T Consensus 5 ~~riavl~SG~Gsnl~all---~~~~~~~~~eI~~Vis~~~~a~--~~~~A~--~~gIp~~~~~~~--~~~~-------- 67 (215)
T 3tqr_A 5 PLPIVVLISGNGTNLQAII---GAIQKGLAIEIRAVISNRADAY--GLKRAQ--QADIPTHIIPHE--EFPS-------- 67 (215)
T ss_dssp CEEEEEEESSCCHHHHHHH---HHHHTTCSEEEEEEEESCTTCH--HHHHHH--HTTCCEEECCGG--GSSS--------
T ss_pred CcEEEEEEeCCcHHHHHHH---HHHHcCCCCEEEEEEeCCcchH--HHHHHH--HcCCCEEEeCcc--ccCc--------
Confidence 5689998887765555444 4442212588888776432221 111111 224555544411 1110
Q ss_pred HHHHHhhhHHHHHHHHHHhhCCCccEEEeCCC-CccHHHHHHHcCCccEEEccc
Q 045267 90 SLTVLRSLPCLRQELTSLVAKATVAALVVDLF-GTDAFDVAQEFNISPYIFYPS 142 (482)
Q Consensus 90 ~~~~~~~~~~l~~~l~~~~~~~~pD~vi~D~~-~~~~~~~A~~lgIP~v~~~~~ 142 (482)
.....+.+.+.+++.+||+||+-.+ ..-...+-+...-.++-++++
T Consensus 68 -------r~~~d~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 68 -------RTDFESTLQKTIDHYDPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp -------HHHHHHHHHHHHHTTCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -------hhHhHHHHHHHHHhcCCCEEEEccchhhCCHHHHhhccCCeEEeCcc
Confidence 0111222334445669999997654 333445555555566665553
No 90
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=59.56 E-value=6.4 Score=35.81 Aligned_cols=53 Identities=17% Similarity=0.198 Sum_probs=39.4
Q ss_pred cccccccccccCchhHHHHhhc---CCcEeeccccccchhhHHHHHhhcceeeeeccCCCCccCHHHHHHHHHHHhcC
Q 045267 358 HGSTGGFLCHCGWNSVLESVVN---GVPLIAWPLYAEQKMNAVILTEDVKLALRPKANENGIVGRDEIAKVVKALMEG 432 (482)
Q Consensus 358 ~~~~~~~I~HGG~gs~~eal~~---GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~vl~~ 432 (482)
.++ ++|+=||-||+.+++.. ++|++.++. | ..--..+ +.++++.++++.++++
T Consensus 41 ~~D--~vv~~GGDGTll~~a~~~~~~~PilGIn~---------------G--~~Gfl~~---~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 41 TAD--LIVVVGGDGTVLKAAKKAADGTPMVGFKA---------------G--RLGFLTS---YTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CCS--EEEEEECHHHHHHHHTTBCTTCEEEEEES---------------S--SCCSSCC---BCGGGHHHHHHHHHTT
T ss_pred CCC--EEEEEeCcHHHHHHHHHhCCCCCEEEEEC---------------C--CCCccCc---CCHHHHHHHHHHHHcC
Confidence 456 99999999999999876 889988862 1 1111122 6678899999888875
No 91
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=57.78 E-value=13 Score=37.18 Aligned_cols=27 Identities=7% Similarity=-0.134 Sum_probs=21.2
Q ss_pred hCCCccEEEeCCCCccHHHHHHHcCCccEE
Q 045267 109 AKATVAALVVDLFGTDAFDVAQEFNISPYI 138 (482)
Q Consensus 109 ~~~~pD~vi~D~~~~~~~~~A~~lgIP~v~ 138 (482)
+..+||++|.... ...+|+++|||++.
T Consensus 398 ~~~~pDL~ig~~~---~~~~a~k~gIP~~~ 424 (483)
T 3pdi_A 398 DEYQADILIAGGR---NMYTALKGRVPFLD 424 (483)
T ss_dssp HHTTCSEEECCGG---GHHHHHHTTCCBCC
T ss_pred HhcCCCEEEECCc---hhHHHHHcCCCEEE
Confidence 3459999998653 56789999999764
No 92
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=57.40 E-value=5.3 Score=32.13 Aligned_cols=35 Identities=14% Similarity=0.120 Sum_probs=24.9
Q ss_pred ccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 8 QAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 8 ~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
+.+++|+++..|..| ..+++.|.++ ||+|+++...
T Consensus 4 ~~~~~v~I~G~G~iG-----~~la~~L~~~-g~~V~~id~~ 38 (141)
T 3llv_A 4 NGRYEYIVIGSEAAG-----VGLVRELTAA-GKKVLAVDKS 38 (141)
T ss_dssp --CCSEEEECCSHHH-----HHHHHHHHHT-TCCEEEEESC
T ss_pred CCCCEEEEECCCHHH-----HHHHHHHHHC-CCeEEEEECC
Confidence 335678888764433 5689999887 9999998643
No 93
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=56.36 E-value=11 Score=32.97 Aligned_cols=37 Identities=22% Similarity=0.229 Sum_probs=32.4
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 10 APHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 10 ~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
++||++.-.|+.|-+. ...|.+.|.++ |++|.++.++
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~-g~eV~vv~T~ 40 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQE-EREVHFLISK 40 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHT-TCEEEEEECH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHC-CCEEEEEECc
Confidence 5688888888888777 88999999887 9999999877
No 94
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=55.77 E-value=13 Score=31.50 Aligned_cols=40 Identities=8% Similarity=0.143 Sum_probs=30.9
Q ss_pred hccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCC
Q 045267 7 AQAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSD 49 (482)
Q Consensus 7 ~~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~ 49 (482)
.|. +||++...|+.|=+. ...+.+.|+++ |++|.++.++.
T Consensus 3 ~m~-k~IllgvTGs~aa~k-~~~ll~~L~~~-g~~V~vv~T~~ 42 (175)
T 3qjg_A 3 AMG-ENVLICLCGSVNSIN-ISHYIIELKSK-FDEVNVIASTN 42 (175)
T ss_dssp --C-CEEEEEECSSGGGGG-HHHHHHHHTTT-CSEEEEEECTG
T ss_pred CCC-CEEEEEEeCHHHHHH-HHHHHHHHHHC-CCEEEEEECcC
Confidence 344 478887778876665 88999999887 99999998774
No 95
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=55.57 E-value=60 Score=30.25 Aligned_cols=101 Identities=13% Similarity=0.017 Sum_probs=0.0
Q ss_pred cCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCCc--------hhhhhhhhcCCCceeEEEec-CCCCCC
Q 045267 9 AAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPPS--------EAQKSTLESLPSSINSVFLP-VSLNDV 79 (482)
Q Consensus 9 ~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~-~~~~~~ 79 (482)
++|||+|+..+.++ ....++|.++ ||+|..+.+.+..+. .......... ++.+.... ..
T Consensus 2 ~~mrIvf~Gt~~fa-----~~~L~~L~~~-~~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~--gIpv~~~~~~~---- 69 (314)
T 1fmt_A 2 ESLRIIFAGTPDFA-----ARHLDALLSS-GHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEK--GLPVFQPVSLR---- 69 (314)
T ss_dssp CCCEEEEEECSHHH-----HHHHHHHHHT-TCEEEEEECCCCBC------CBCCHHHHHHHHT--TCCEECCSCSC----
T ss_pred CCCEEEEEecCHHH-----HHHHHHHHHC-CCcEEEEEeCCCCccccccccCcCHHHHHHHHc--CCcEEecCCCC----
Q ss_pred CcchhhHHHHHHHHHhhhHHHHHHHHHHhhCCCccEEE-eCCCCccHHHHHHHcCCccEEEccc
Q 045267 80 AEDARAETVISLTVLRSLPCLRQELTSLVAKATVAALV-VDLFGTDAFDVAQEFNISPYIFYPS 142 (482)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~pD~vi-~D~~~~~~~~~A~~lgIP~v~~~~~ 142 (482)
.+.+.+.++++ +||++| +.+...-...+-+.....++-++++
T Consensus 70 -----------------~~~~~~~l~~~----~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpS 112 (314)
T 1fmt_A 70 -----------------PQENQQLVAEL----QADVMVVVAYGLILPKAVLEMPRLGCINVHGS 112 (314)
T ss_dssp -----------------SHHHHHHHHHT----TCSEEEEESCCSCCCHHHHHSSTTCEEEEESS
T ss_pred -----------------CHHHHHHHHhc----CCCEEEEeeccccCCHHHHhhccCCEEEEcCC
No 96
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=53.77 E-value=28 Score=30.58 Aligned_cols=107 Identities=9% Similarity=0.051 Sum_probs=57.5
Q ss_pred EEEEEcCCCCCChHH----HHHHHHHHHhcCCCEEEEEcCCCCCCchhhhhhhhcCCCcee-EEEec-CCCCCCCcchhh
Q 045267 12 HIVLLPSPGMGHLIP----LIEFAKRLVHRHHFLVTFFIPSDGPPSEAQKSTLESLPSSIN-SVFLP-VSLNDVAEDARA 85 (482)
Q Consensus 12 ~ili~~~~~~GH~~P----~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~-~~~~~~~~~~~~ 85 (482)
.|+++.--..|.++| ++.-|+.|++..|-+|+.++-....+. ..+.... + |.+ .+.+. ..+....
T Consensus 5 ~ilV~~E~~~g~l~~~s~ell~~A~~La~~~g~~v~av~~G~~~~~-~~~~~~~-~--Gad~v~~v~~~~~~~~~----- 75 (217)
T 3ih5_A 5 NLFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLKE-IEKQILP-Y--GVDKLHVFDAEGLYPYT----- 75 (217)
T ss_dssp CEEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCTT-THHHHGG-G--TCSEEEEEECGGGSSCC-----
T ss_pred cEEEEEECcCCEECHHHHHHHHHHHHHHHhcCCeEEEEEECCCHHH-HHHHHHh-c--CCCEEEEecCcccccCC-----
Confidence 477777666677666 588888897765777877764432221 1122221 1 222 22222 1111111
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHhhCCCccEEEeCCCCcc---HHHHHHHcCCccEE
Q 045267 86 ETVISLTVLRSLPCLRQELTSLVAKATVAALVVDLFGTD---AFDVAQEFNISPYI 138 (482)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~~~~~~pD~vi~D~~~~~---~~~~A~~lgIP~v~ 138 (482)
.+.....+.+++++.+||+|++.....+ +..+|.+|++|.+.
T Consensus 76 -----------~~~~a~~l~~~i~~~~p~~Vl~g~t~~G~~laprlAa~L~~~~~s 120 (217)
T 3ih5_A 76 -----------SLPHTSILVNLFKEEQPQICLMGATVIGRDLGPRVSSALTSGLTA 120 (217)
T ss_dssp -----------HHHHHHHHHHHHHHHCCSEEEEECSHHHHHHHHHHHHHTTCCCBC
T ss_pred -----------HHHHHHHHHHHHHhcCCCEEEEeCCcchhhHHHHHHHHhCCCccc
Confidence 1112222333333448999998875543 34799999999664
No 97
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=53.60 E-value=17 Score=30.86 Aligned_cols=44 Identities=11% Similarity=0.030 Sum_probs=29.7
Q ss_pred eccccch-hhhhhcccccccccccCchhHHHH---hhcCCcEeecccc
Q 045267 346 VPSWAPQ-AQVLSHGSTGGFLCHCGWNSVLES---VVNGVPLIAWPLY 389 (482)
Q Consensus 346 ~~~~ipq-~~lL~~~~~~~~I~HGG~gs~~ea---l~~GvP~v~~P~~ 389 (482)
+++..+. ..++...+.++++--||.||..|+ +.+++|++++|.+
T Consensus 93 ~~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 93 VTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp ECCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred EcCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 3444453 334444444567778999987655 7799999999983
No 98
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=53.33 E-value=9 Score=35.11 Aligned_cols=53 Identities=17% Similarity=0.114 Sum_probs=39.0
Q ss_pred cccccccccccCchhHHHHhhc------CCcEeeccccccchhhHHHHHhhcceeeeeccCCCCccCHHHHHHHHHHHhc
Q 045267 358 HGSTGGFLCHCGWNSVLESVVN------GVPLIAWPLYAEQKMNAVILTEDVKLALRPKANENGIVGRDEIAKVVKALME 431 (482)
Q Consensus 358 ~~~~~~~I~HGG~gs~~eal~~------GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~vl~ 431 (482)
.++ ++|.=||-||+.+++.. ++|++.+|... .| -..+ +.++++.++++.+++
T Consensus 35 ~~D--~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G~------------lg-----fl~~---~~~~~~~~~l~~l~~ 92 (272)
T 2i2c_A 35 EPE--IVISIGGDGTFLSAFHQYEERLDEIAFIGIHTGH------------LG-----FYAD---WRPAEADKLVKLLAK 92 (272)
T ss_dssp SCS--EEEEEESHHHHHHHHHHTGGGTTTCEEEEEESSS------------CC-----SSCC---BCGGGHHHHHHHHHT
T ss_pred CCC--EEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCCC------------CC-----cCCc---CCHHHHHHHHHHHHc
Confidence 356 99999999999998764 89999997410 11 1122 667888888988887
Q ss_pred C
Q 045267 432 G 432 (482)
Q Consensus 432 ~ 432 (482)
+
T Consensus 93 g 93 (272)
T 2i2c_A 93 G 93 (272)
T ss_dssp T
T ss_pred C
Confidence 5
No 99
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=52.81 E-value=28 Score=30.50 Aligned_cols=107 Identities=14% Similarity=0.015 Sum_probs=52.2
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEecCCCCCCCcchhhHHHH
Q 045267 10 APHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLPVSLNDVAEDARAETVI 89 (482)
Q Consensus 10 ~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 89 (482)
++||+++.+|+.+.+..++ +++....+++|..+.+..... ...... ..|+.+...+.. ....
T Consensus 12 ~~ri~vl~SG~gsnl~all---~~~~~~~~~eI~~Vis~~~a~---~~~~A~--~~gIp~~~~~~~--~~~~-------- 73 (215)
T 3da8_A 12 PARLVVLASGTGSLLRSLL---DAAVGDYPARVVAVGVDRECR---AAEIAA--EASVPVFTVRLA--DHPS-------- 73 (215)
T ss_dssp SEEEEEEESSCCHHHHHHH---HHSSTTCSEEEEEEEESSCCH---HHHHHH--HTTCCEEECCGG--GSSS--------
T ss_pred CcEEEEEEeCChHHHHHHH---HHHhccCCCeEEEEEeCCchH---HHHHHH--HcCCCEEEeCcc--cccc--------
Confidence 4689999888755444444 444222256888777554321 111111 224554444311 1010
Q ss_pred HHHHHhhhHHHHHHHHHHhhCCCccEEEeCCC-CccHHHHHHHcCCccEEEcc
Q 045267 90 SLTVLRSLPCLRQELTSLVAKATVAALVVDLF-GTDAFDVAQEFNISPYIFYP 141 (482)
Q Consensus 90 ~~~~~~~~~~l~~~l~~~~~~~~pD~vi~D~~-~~~~~~~A~~lgIP~v~~~~ 141 (482)
.+.+.+.+.+.+++.+||+||+-.+ ..-...+-+...-.++-+++
T Consensus 74 -------r~~~d~~~~~~l~~~~~Dlivlagy~~iL~~~~l~~~~~~~iNiHp 119 (215)
T 3da8_A 74 -------RDAWDVAITAATAAHEPDLVVSAGFMRILGPQFLSRFYGRTLNTHP 119 (215)
T ss_dssp -------HHHHHHHHHHHHHTTCCSEEEEEECCSCCCHHHHHHHTTTEEEEES
T ss_pred -------hhhhhHHHHHHHHhhCCCEEEEcCchhhCCHHHHhhccCCeEEeCc
Confidence 0111223344445679999996543 33334444445555565554
No 100
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=52.49 E-value=20 Score=34.01 Aligned_cols=38 Identities=13% Similarity=0.190 Sum_probs=33.1
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCC
Q 045267 12 HIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDG 50 (482)
Q Consensus 12 ~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~ 50 (482)
-+++..-|+.|-..=++.+|..++.. |..|.|++.+..
T Consensus 48 LiiIaG~pG~GKTt~al~ia~~~a~~-g~~Vl~fSlEms 85 (338)
T 4a1f_A 48 LVIIGARPSMGKTSLMMNMVLSALND-DRGVAVFSLEMS 85 (338)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHT-TCEEEEEESSSC
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHc-CCeEEEEeCCCC
Confidence 47788888999999999999999886 999999998743
No 101
>3giu_A Pyrrolidone-carboxylate peptidase; IDP00836, hydrolase, PROT thiol protease, structural genomics; HET: MSE PG4; 1.25A {Staphylococcus aureus subsp} SCOP: c.56.4.0
Probab=51.61 E-value=20 Score=31.49 Aligned_cols=27 Identities=22% Similarity=0.224 Sum_probs=21.6
Q ss_pred cCCEEEEEcCCCCCC--hHHHHHHHHHHH
Q 045267 9 AAPHIVLLPSPGMGH--LIPLIEFAKRLV 35 (482)
Q Consensus 9 ~~~~ili~~~~~~GH--~~P~l~La~~L~ 35 (482)
++|+|++..|+-+|+ .||...++++|.
T Consensus 2 ~~m~VLvTGF~PF~~~~~NPS~~~v~~L~ 30 (215)
T 3giu_A 2 NAMHILVTGFAPFDNQNINPSWEAVTQLE 30 (215)
T ss_dssp --CEEEEEEECCCTTCSCCHHHHHHHHSC
T ss_pred CCcEEEEEecCCCCCCCCChHHHHHHHhc
Confidence 467999999987754 799999999993
No 102
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=51.27 E-value=51 Score=29.67 Aligned_cols=32 Identities=19% Similarity=0.071 Sum_probs=22.9
Q ss_pred CCccEEE-eCCCC-ccHHHHHHHcCCccEEEccc
Q 045267 111 ATVAALV-VDLFG-TDAFDVAQEFNISPYIFYPS 142 (482)
Q Consensus 111 ~~pD~vi-~D~~~-~~~~~~A~~lgIP~v~~~~~ 142 (482)
..||+|| +|... .-+..=|.++|||+|.+.-+
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDT 190 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADT 190 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCT
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecC
Confidence 4799887 55533 23566788899999987554
No 103
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=51.09 E-value=54 Score=31.40 Aligned_cols=36 Identities=19% Similarity=0.040 Sum_probs=29.8
Q ss_pred CEEEEEcC-CCCCChHHHHHHHHHHHhcCCCEEEEEcC
Q 045267 11 PHIVLLPS-PGMGHLIPLIEFAKRLVHRHHFLVTFFIP 47 (482)
Q Consensus 11 ~~ili~~~-~~~GH~~P~l~La~~L~~r~GH~Vt~~~~ 47 (482)
++|++++. |+.|-..-...||..|+++ |++|.++..
T Consensus 2 ~~i~~~~gkGG~GKTt~a~~la~~la~~-g~~vllvd~ 38 (374)
T 3igf_A 2 ALILTFLGKSGVARTKIAIAAAKLLASQ-GKRVLLAGL 38 (374)
T ss_dssp CEEEEEECSBHHHHHHHHHHHHHHHHHT-TCCEEEEEC
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHC-CCCeEEEeC
Confidence 34666655 5669999999999999988 999999987
No 104
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=50.53 E-value=1.1e+02 Score=25.57 Aligned_cols=143 Identities=13% Similarity=0.146 Sum_probs=73.9
Q ss_pred CcEEEEeccCCCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCCCCCcccccCCCCCCCCCCchhHHhhhcCCCeeecccc
Q 045267 271 GSVLFVSFGSGGTLSCEQLNELALGLEMSEQRFLWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWA 350 (482)
Q Consensus 271 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~i 350 (482)
.|.|-|-+|| ..+-+..++....|+.++..+-..+-+-.. .|+.+. +|+
T Consensus 12 ~P~V~IimGS--~SD~~v~~~a~~~l~~~gi~~ev~V~saHR------------------~p~~l~-----------~~~ 60 (173)
T 4grd_A 12 APLVGVLMGS--SSDWDVMKHAVAILQEFGVPYEAKVVSAHR------------------MPDEMF-----------DYA 60 (173)
T ss_dssp SCSEEEEESS--GGGHHHHHHHHHHHHHTTCCEEEEECCTTT------------------SHHHHH-----------HHH
T ss_pred CCeEEEEeCc--HhHHHHHHHHHHHHHHcCCCEEEEEEcccc------------------CHHHHH-----------HHH
Confidence 4577888887 346667888888899998775544433221 334322 111
Q ss_pred chhhhhhcccccccccc-cCch---hHHHHhhcCCcEeeccccccch---hhHHHHHh-hccee--eeeccCCCCccCHH
Q 045267 351 PQAQVLSHGSTGGFLCH-CGWN---SVLESVVNGVPLIAWPLYAEQK---MNAVILTE-DVKLA--LRPKANENGIVGRD 420 (482)
Q Consensus 351 pq~~lL~~~~~~~~I~H-GG~g---s~~eal~~GvP~v~~P~~~DQ~---~na~rv~~-~~G~G--~~l~~~~~~~~~~~ 420 (482)
-.. ....++++|.= ||.+ ++.-+ ..-+|+|.+|...... +--..+.+ -.|+. ...- +.++..+..
T Consensus 61 ~~a---~~~g~~ViIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSivqMP~Gvpvatv~i-~~~~a~NAa 135 (173)
T 4grd_A 61 EKA---RERGLRAIIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIVQMPKGVPVATFAI-GEAGAANAA 135 (173)
T ss_dssp HHH---TTTTCSEEEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCS-SHHHHHHHH
T ss_pred HHH---HhcCCeEEEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHHhCCCCCCceEEec-CCcchHHHH
Confidence 110 00112244443 3333 33333 4579999999754321 11111111 02333 2221 111124555
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHh
Q 045267 421 EIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVL 453 (482)
Q Consensus 421 ~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~ 453 (482)
-++..|-. +.|+ +++++.+.++++.++..
T Consensus 136 llA~~ILa-~~d~---~l~~kl~~~r~~~~~~v 164 (173)
T 4grd_A 136 LFAVSILS-GNSV---DYANRLAAFRVRQNEAA 164 (173)
T ss_dssp HHHHHHHT-TSCH---HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHc-CCCH---HHHHHHHHHHHHHHHHH
Confidence 55555532 3465 89999999998888643
No 105
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=49.32 E-value=16 Score=30.44 Aligned_cols=39 Identities=15% Similarity=-0.009 Sum_probs=34.2
Q ss_pred cCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 9 AAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 9 ~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
++.+|++.+.+..+|-....-++..|..+ |++|.++...
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~-G~eVi~lG~~ 55 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDA-GFEVVYTGLR 55 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHT-TCEEECCCSB
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHC-CCEEEECCCC
Confidence 35689999999999999999999999776 9999998754
No 106
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=49.11 E-value=22 Score=30.89 Aligned_cols=40 Identities=20% Similarity=0.123 Sum_probs=32.0
Q ss_pred ccCCEEEEEcCCCCCChH-HHHHHHHHHHhcCCCEEEEEcCCC
Q 045267 8 QAAPHIVLLPSPGMGHLI-PLIEFAKRLVHRHHFLVTFFIPSD 49 (482)
Q Consensus 8 ~~~~~ili~~~~~~GH~~-P~l~La~~L~~r~GH~Vt~~~~~~ 49 (482)
++.+||++.-.|+ +..+ =.+.|.+.|.++ |++|.++.++.
T Consensus 5 l~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~-g~eV~vv~T~~ 45 (201)
T 3lqk_A 5 FAGKHVGFGLTGS-HCTYHEVLPQMERLVEL-GAKVTPFVTHT 45 (201)
T ss_dssp CTTCEEEEECCSC-GGGGGGTHHHHHHHHHT-TCEEEEECSSC
T ss_pred cCCCEEEEEEECh-HHHHHHHHHHHHHHhhC-CCEEEEEEChh
Confidence 3456788888787 4455 789999999887 99999998774
No 107
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=48.46 E-value=12 Score=32.42 Aligned_cols=39 Identities=0% Similarity=-0.043 Sum_probs=32.2
Q ss_pred ccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 8 QAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 8 ~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
++.+||++...|+.|=.. ...|.+.|.++ |++|.++.++
T Consensus 6 l~~k~IllgvTGs~aa~k-~~~l~~~L~~~-g~~V~vv~T~ 44 (194)
T 1p3y_1 6 LKDKKLLIGICGSISSVG-ISSYLLYFKSF-FKEIRVVMTK 44 (194)
T ss_dssp GGGCEEEEEECSCGGGGG-THHHHHHHTTT-SSEEEEEECH
T ss_pred cCCCEEEEEEECHHHHHH-HHHHHHHHHHC-CCEEEEEEch
Confidence 445688888888887776 78999999877 9999999876
No 108
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=48.14 E-value=32 Score=33.85 Aligned_cols=38 Identities=13% Similarity=0.146 Sum_probs=32.3
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCC
Q 045267 12 HIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSD 49 (482)
Q Consensus 12 ~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~ 49 (482)
-+++..-|+.|-..=.+.+|...+.+.|..|.|++.+.
T Consensus 202 l~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~ 239 (444)
T 2q6t_A 202 LNIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEM 239 (444)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCC
Confidence 47888888999999999999998764489999998874
No 109
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=48.09 E-value=1.4e+02 Score=25.93 Aligned_cols=106 Identities=12% Similarity=0.034 Sum_probs=54.0
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcC-CCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEec-CCCCCCCcchhhHHH
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRH-HFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLP-VSLNDVAEDARAETV 88 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~-GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~ 88 (482)
+||+++.++..+ -+.+|.+++.+.. +|+|..+.+..... ....... ..++.+..++ ....+
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~--~~~~~A~--~~gIp~~~~~~~~~~~---------- 63 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADA--FGLERAR--QAGIATHTLIASAFDS---------- 63 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTC--HHHHHHH--HTTCEEEECCGGGCSS----------
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCch--HHHHHHH--HcCCcEEEeCcccccc----------
Confidence 368888877664 3566777774431 48887766543222 1111122 2255555443 11110
Q ss_pred HHHHHHhhhHHHHHHHHHHhhCCCccEEEeCCC-CccHHHHHHHcCCccEEEcc
Q 045267 89 ISLTVLRSLPCLRQELTSLVAKATVAALVVDLF-GTDAFDVAQEFNISPYIFYP 141 (482)
Q Consensus 89 ~~~~~~~~~~~l~~~l~~~~~~~~pD~vi~D~~-~~~~~~~A~~lgIP~v~~~~ 141 (482)
.+.+.+.+.+.+++.+||+||+-.+ ..-...+-+.....++-+++
T Consensus 64 --------r~~~~~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHp 109 (212)
T 1jkx_A 64 --------REAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHP 109 (212)
T ss_dssp --------HHHHHHHHHHHHGGGCCSEEEESSCCSCCCHHHHHHTTTSEEEEES
T ss_pred --------hhhccHHHHHHHHhcCCCEEEEeChhhhCCHHHHhhccCCEEEEcc
Confidence 0112222334445569999997654 33344455555566666555
No 110
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=47.37 E-value=14 Score=33.87 Aligned_cols=34 Identities=18% Similarity=0.169 Sum_probs=24.0
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCC
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSD 49 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~ 49 (482)
|||++. |+.|.+= -.|++.|.++ ||+|+.++-.+
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~-G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNAR-GHEVTLVSRKP 34 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHT-TCEEEEEESSC
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHC-CCEEEEEECCC
Confidence 577765 4445443 3578999888 99999998543
No 111
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=47.12 E-value=24 Score=30.66 Aligned_cols=38 Identities=26% Similarity=-0.000 Sum_probs=34.2
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 10 APHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 10 ~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
+.+|++.+.++..|-....-++..|..+ |++|.++...
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~-G~~v~~LG~~ 125 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESG-GFTVYNLGVD 125 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHT-TCEEEECCSS
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHC-CCEEEECCCC
Confidence 4589999999999999999999999777 9999999864
No 112
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=46.92 E-value=66 Score=31.61 Aligned_cols=41 Identities=15% Similarity=0.278 Sum_probs=34.9
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCC
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPP 52 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~ 52 (482)
..|+++..++.|-..-...||..|.++ |++|.++..+.+..
T Consensus 101 ~vIlivG~~G~GKTTt~~kLA~~l~~~-G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 101 TILLMVGIQGSGKTTTVAKLARYFQKR-GYKVGVVCSDTWRP 141 (443)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHHTT-TCCEEEEECCCSST
T ss_pred eEEEEECcCCCCHHHHHHHHHHHHHHC-CCeEEEEeCCCcch
Confidence 357777777889999999999999887 99999999876655
No 113
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=46.08 E-value=70 Score=28.31 Aligned_cols=30 Identities=13% Similarity=0.094 Sum_probs=21.0
Q ss_pred CccEEE-eCCCC-ccHHHHHHHcCCccEEEcc
Q 045267 112 TVAALV-VDLFG-TDAFDVAQEFNISPYIFYP 141 (482)
Q Consensus 112 ~pD~vi-~D~~~-~~~~~~A~~lgIP~v~~~~ 141 (482)
.||+|| .|+.. .-+..=|.++|||+|.+.-
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivD 188 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLID 188 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECCC
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEec
Confidence 599987 55533 2355678889999998654
No 114
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=46.02 E-value=55 Score=29.17 Aligned_cols=22 Identities=5% Similarity=0.045 Sum_probs=13.8
Q ss_pred HHHHHHHHHhhCCCccEEEeCC
Q 045267 99 CLRQELTSLVAKATVAALVVDL 120 (482)
Q Consensus 99 ~l~~~l~~~~~~~~pD~vi~D~ 120 (482)
.+.+.+.+++++.+||+|++-.
T Consensus 84 ~~~~~l~~~ir~~~PdvV~t~~ 105 (242)
T 2ixd_A 84 EYIREIVKVIRTYKPKLVFAPY 105 (242)
T ss_dssp HHHHHHHHHHHHHCCSEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEECC
Confidence 3344444555556999999753
No 115
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1
Probab=45.83 E-value=66 Score=22.50 Aligned_cols=55 Identities=11% Similarity=0.078 Sum_probs=32.4
Q ss_pred CccCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHh-hcCC-chHHHHHHHHHHHh
Q 045267 415 GIVGRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVL-SENG-SSTKALSQLASKWN 471 (482)
Q Consensus 415 ~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~-~~~g-~~~~~~~~~~~~~~ 471 (482)
+..|.++|.++|+++|.+.+.+.+.. +++++.+.+.. .-+= .....|++.+....
T Consensus 10 ~~Psd~ei~~~I~~IL~~aDL~tvT~--K~VR~~Le~~~pg~dLs~kK~~I~~~I~~~L 66 (70)
T 1q1v_A 10 KPPTDEELKETIKKLLASANLEEVTM--KQICKKVYENYPTYDLTERKDFIKTTVKELI 66 (70)
T ss_dssp CCCCHHHHHHHHHHHHTTSCGGGCCH--HHHHHHHHHHCSSSCCSHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHhCCHHHHhH--HHHHHHHHHHccCCCChHHHHHHHHHHHHHH
Confidence 34899999999999999766333222 33444444432 2222 23346677666543
No 116
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=45.68 E-value=19 Score=28.87 Aligned_cols=35 Identities=6% Similarity=0.118 Sum_probs=26.1
Q ss_pred EEEEcCC--CCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 13 IVLLPSP--GMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 13 ili~~~~--~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
.+++..+ ........+.+|...++. ||+|+++...
T Consensus 19 ~ii~~sgP~~~~~~~~al~lA~~A~a~-g~eV~vFf~~ 55 (134)
T 3mc3_A 19 LIVVTHGPEDLDRTYAPLFMASISASM-EYETSVFFMI 55 (134)
T ss_dssp EEEECCCGGGTHHHHHHHHHHHHHHHT-TCEEEEEECT
T ss_pred EEEEccCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEEe
Confidence 3344444 456778899999988888 9999988655
No 117
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=45.64 E-value=37 Score=35.82 Aligned_cols=113 Identities=11% Similarity=0.085 Sum_probs=78.0
Q ss_pred eccccchhhhhhcccccccccccCchhHHHHhhcCCcEeeccccccchhhHHHHHhhcceeeeeccCC--CC--ccCHHH
Q 045267 346 VPSWAPQAQVLSHGSTGGFLCHCGWNSVLESVVNGVPLIAWPLYAEQKMNAVILTEDVKLALRPKANE--NG--IVGRDE 421 (482)
Q Consensus 346 ~~~~ipq~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~--~~--~~~~~~ 421 (482)
+.++.+-.++|..+| ++||-- .+.+.|.+..++|+|.+..-.|++.. +. +| ...+..+ .| .-|.++
T Consensus 603 ~~~~~di~~ll~~aD--~lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~----~~-rg--~y~d~~~~~pg~~~~~~~e 672 (729)
T 3l7i_A 603 VSNYNDVSELFLISD--CLITDY-SSVMFDYGILKRPQFFFAYDIDKYDK----GL-RG--FYMNYMEDLPGPIYTEPYG 672 (729)
T ss_dssp CTTCSCHHHHHHTCS--EEEESS-CTHHHHHGGGCCCEEEECTTTTTTTS----SC-CS--BSSCTTSSSSSCEESSHHH
T ss_pred CCCCcCHHHHHHHhC--EEEeec-hHHHHhHHhhCCCEEEecCCHHHHhh----cc-CC--cccChhHhCCCCeECCHHH
Confidence 455667788999999 999874 46788999999999998776666533 11 23 3333211 11 146789
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHh
Q 045267 422 IAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQLASKWN 471 (482)
Q Consensus 422 l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~ 471 (482)
|.++|.....++ ..++++.+++.+++-.. +.|.++++.++.+.+...
T Consensus 673 L~~~i~~~~~~~--~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~~ 719 (729)
T 3l7i_A 673 LAKELKNLDKVQ--QQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDIK 719 (729)
T ss_dssp HHHHHTTHHHHH--HHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHHH
T ss_pred HHHHHhhhhccc--hhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcCc
Confidence 999998776532 26788888888887542 457788888888877554
No 118
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=45.45 E-value=14 Score=34.01 Aligned_cols=56 Identities=11% Similarity=0.063 Sum_probs=37.8
Q ss_pred hhhcccccccccccCchhHHHHhh----cCCcEeeccccccchhhHHHHHhhcceeeeeccCCCCccCHHHHHHHHHHHh
Q 045267 355 VLSHGSTGGFLCHCGWNSVLESVV----NGVPLIAWPLYAEQKMNAVILTEDVKLALRPKANENGIVGRDEIAKVVKALM 430 (482)
Q Consensus 355 lL~~~~~~~~I~HGG~gs~~eal~----~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~vl 430 (482)
.-..++ ++|.=||-||+.+++. .++|++.++.. ..-...+ +.++++.++++.++
T Consensus 60 ~~~~~D--~vi~~GGDGT~l~a~~~~~~~~~P~lGI~~G-----------------t~gfla~---~~~~~~~~al~~i~ 117 (292)
T 2an1_A 60 IGQQAD--LAVVVGGDGNMLGAARTLARYDINVIGINRG-----------------NLGFLTD---LDPDNALQQLSDVL 117 (292)
T ss_dssp HHHHCS--EEEECSCHHHHHHHHHHHTTSSCEEEEBCSS-----------------SCCSSCC---BCTTSHHHHHHHHH
T ss_pred cccCCC--EEEEEcCcHHHHHHHHHhhcCCCCEEEEECC-----------------CcccCCc---CCHHHHHHHHHHHH
Confidence 344567 9999999999999974 37899998721 1111112 44566777777777
Q ss_pred cC
Q 045267 431 EG 432 (482)
Q Consensus 431 ~~ 432 (482)
++
T Consensus 118 ~g 119 (292)
T 2an1_A 118 EG 119 (292)
T ss_dssp TT
T ss_pred cC
Confidence 65
No 119
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=45.35 E-value=13 Score=35.26 Aligned_cols=34 Identities=21% Similarity=0.107 Sum_probs=25.7
Q ss_pred ccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcC
Q 045267 8 QAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIP 47 (482)
Q Consensus 8 ~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~ 47 (482)
|++|+|+|+..|..|. .+|..|.++ ||+|+++..
T Consensus 2 m~~mki~iiG~G~~G~-----~~a~~L~~~-g~~V~~~~r 35 (359)
T 1bg6_A 2 IESKTYAVLGLGNGGH-----AFAAYLALK-GQSVLAWDI 35 (359)
T ss_dssp --CCEEEEECCSHHHH-----HHHHHHHHT-TCEEEEECS
T ss_pred CCcCeEEEECCCHHHH-----HHHHHHHhC-CCEEEEEeC
Confidence 5568999998877774 467888777 999998854
No 120
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=44.95 E-value=20 Score=31.30 Aligned_cols=39 Identities=8% Similarity=-0.020 Sum_probs=30.6
Q ss_pred cCCEEEEEcCCCCCChHH-HHHHHHHHHhcCCCEEEEEcCCC
Q 045267 9 AAPHIVLLPSPGMGHLIP-LIEFAKRLVHRHHFLVTFFIPSD 49 (482)
Q Consensus 9 ~~~~ili~~~~~~GH~~P-~l~La~~L~~r~GH~Vt~~~~~~ 49 (482)
+.+||++.-.|+ +..+- ...|.+.|+++ |++|.++.++.
T Consensus 4 ~~k~IllgiTGs-iaayk~~~~ll~~L~~~-g~eV~vv~T~~ 43 (207)
T 3mcu_A 4 KGKRIGFGFTGS-HCTYEEVMPHLEKLIAE-GAEVRPVVSYT 43 (207)
T ss_dssp TTCEEEEEECSC-GGGGTTSHHHHHHHHHT-TCEEEEEECC-
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHHhC-CCEEEEEEehH
Confidence 446788877776 45665 88999999887 99999998774
No 121
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=44.79 E-value=1.1e+02 Score=28.11 Aligned_cols=37 Identities=14% Similarity=0.140 Sum_probs=29.4
Q ss_pred EEEEEcC-CCCCChHHHHHHHHHHHhcCCCEEEEEcCCC
Q 045267 12 HIVLLPS-PGMGHLIPLIEFAKRLVHRHHFLVTFFIPSD 49 (482)
Q Consensus 12 ~ili~~~-~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~ 49 (482)
.|+|.+. |+.|-..-...||..|+++ |.+|.++-.+.
T Consensus 106 vI~vts~kgG~GKTtva~nLA~~lA~~-G~rVLLID~D~ 143 (299)
T 3cio_A 106 ILMITGATPDSGKTFVSSTLAAVIAQS-DQKVLFIDADL 143 (299)
T ss_dssp EEEEEESSSSSCHHHHHHHHHHHHHHT-TCCEEEEECCT
T ss_pred EEEEECCCCCCChHHHHHHHHHHHHhC-CCcEEEEECCC
Confidence 4444443 5779999999999999988 99999997554
No 122
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=43.80 E-value=11 Score=35.14 Aligned_cols=56 Identities=14% Similarity=0.131 Sum_probs=37.2
Q ss_pred hhhcccccccccccCchhHHHHhhc----CCcEeeccccccchhhHHHHHhhcceeeeeccCCCCccCHHHHHHHHHHHh
Q 045267 355 VLSHGSTGGFLCHCGWNSVLESVVN----GVPLIAWPLYAEQKMNAVILTEDVKLALRPKANENGIVGRDEIAKVVKALM 430 (482)
Q Consensus 355 lL~~~~~~~~I~HGG~gs~~eal~~----GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~vl 430 (482)
....++ ++|.-||-||+.+++.. ++|++.++... .| ...+ +.++++.++++.++
T Consensus 72 ~~~~~d--~vi~~GGDGT~l~a~~~~~~~~~pvlgi~~G~------------~g-----fl~~---~~~~~~~~~~~~i~ 129 (307)
T 1u0t_A 72 AADGCE--LVLVLGGDGTFLRAAELARNASIPVLGVNLGR------------IG-----FLAE---AEAEAIDAVLEHVV 129 (307)
T ss_dssp ----CC--CEEEEECHHHHHHHHHHHHHHTCCEEEEECSS------------CC-----SSCS---EEGGGHHHHHHHHH
T ss_pred cccCCC--EEEEEeCCHHHHHHHHHhccCCCCEEEEeCCC------------Cc-----cCcc---cCHHHHHHHHHHHH
Confidence 344567 99999999999999754 89999987311 11 1112 45677778888777
Q ss_pred cC
Q 045267 431 EG 432 (482)
Q Consensus 431 ~~ 432 (482)
++
T Consensus 130 ~g 131 (307)
T 1u0t_A 130 AQ 131 (307)
T ss_dssp HT
T ss_pred cC
Confidence 65
No 123
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=43.45 E-value=27 Score=30.51 Aligned_cols=39 Identities=10% Similarity=0.167 Sum_probs=31.7
Q ss_pred ccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCC
Q 045267 8 QAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSD 49 (482)
Q Consensus 8 ~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~ 49 (482)
++++||++...|+.+-+. ...|.+.|.++ | +|.++.++.
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~ll~~L~~~-g-~V~vv~T~~ 55 (209)
T 1mvl_A 17 PRKPRVLLAASGSVAAIK-FGNLCHCFTEW-A-EVRAVVTKS 55 (209)
T ss_dssp --CCEEEEEECSSGGGGG-HHHHHHHHHTT-S-EEEEEECTG
T ss_pred cCCCEEEEEEeCcHHHHH-HHHHHHHHhcC-C-CEEEEEcch
Confidence 335789999889988776 89999999877 8 999998874
No 124
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=43.23 E-value=1.6e+02 Score=25.39 Aligned_cols=107 Identities=12% Similarity=0.071 Sum_probs=51.4
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhc-CCCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEecCCCCCCCcchhhHHHH
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHR-HHFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLPVSLNDVAEDARAETVI 89 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r-~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 89 (482)
+||+++.+|..+.+..++ +++.+. .+|+|..+.+...... ...... ..++.+..++.. .... .
T Consensus 1 ~riaVl~SG~Gs~L~aLi---~~~~~~~~~~~I~~Vvs~~~~~~--~~~~A~--~~gIp~~~~~~~--~~~~----r--- 64 (209)
T 1meo_A 1 ARVAVLISGTGSNLQALI---DSTREPNSSAQIDIVISNKAAVA--GLDKAE--RAGIPTRVINHK--LYKN----R--- 64 (209)
T ss_dssp CEEEEEESSSCTTHHHHH---HHHHSTTCSCEEEEEEESSTTCH--HHHHHH--HTTCCEEECCGG--GSSS----H---
T ss_pred CeEEEEEECCchHHHHHH---HHHhcCCCCcEEEEEEeCCCChH--HHHHHH--HcCCCEEEECcc--ccCc----h---
Confidence 368888888776655544 444332 1589987765543221 111111 224544433311 0000 0
Q ss_pred HHHHHhhhHHHHHHHHHHhhCCCccEEEeCCC-CccHHHHHHHcCCccEEEcc
Q 045267 90 SLTVLRSLPCLRQELTSLVAKATVAALVVDLF-GTDAFDVAQEFNISPYIFYP 141 (482)
Q Consensus 90 ~~~~~~~~~~l~~~l~~~~~~~~pD~vi~D~~-~~~~~~~A~~lgIP~v~~~~ 141 (482)
....+.+.+.+ +..+||+||+-.+ ..-...+-+.....++-+++
T Consensus 65 ----~~~~~~~~~~l----~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHp 109 (209)
T 1meo_A 65 ----VEFDSAIDLVL----EEFSIDIVCLAGFMRILSGPFVQKWNGKMLNIHP 109 (209)
T ss_dssp ----HHHHHHHHHHH----HHTTCCEEEEESCCSCCCHHHHHHTTTSEEEEES
T ss_pred ----hhhhHHHHHHH----HhcCCCEEEEcchhhhCCHHHHhhhcCCEEEEcc
Confidence 00112233333 4459999986553 33344444555556666555
No 125
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=42.83 E-value=1.3e+02 Score=26.63 Aligned_cols=37 Identities=8% Similarity=-0.023 Sum_probs=25.5
Q ss_pred CEEEEEcCCCCCCh-HHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 11 PHIVLLPSPGMGHL-IPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 11 ~~ili~~~~~~GH~-~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
|||+++-.-+.-++ ..+...++.+..- |.+|.+++.+
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~p-~~~i~~~t~~ 39 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAAP-GTEILAVCPR 39 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCCT-TEEEEEECCS
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcCC-CCEEEEEeCC
Confidence 46777766666555 4666788888544 8888888755
No 126
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=42.54 E-value=10 Score=30.15 Aligned_cols=35 Identities=11% Similarity=-0.026 Sum_probs=23.9
Q ss_pred ccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 8 QAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 8 ~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
+++++|+++..|..| ..+++.|.++ |++|+++...
T Consensus 4 ~~~~~v~I~G~G~iG-----~~~a~~l~~~-g~~v~~~d~~ 38 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFG-----GSIVKELHRM-GHEVLAVDIN 38 (144)
T ss_dssp --CCSEEEECCSHHH-----HHHHHHHHHT-TCCCEEEESC
T ss_pred CcCCcEEEECCCHHH-----HHHHHHHHHC-CCEEEEEeCC
Confidence 444578888754444 4578889887 9999988643
No 127
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=42.51 E-value=13 Score=35.19 Aligned_cols=34 Identities=12% Similarity=0.165 Sum_probs=27.4
Q ss_pred ccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcC
Q 045267 8 QAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIP 47 (482)
Q Consensus 8 ~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~ 47 (482)
|..|+|+|+..|+.|- .+|..|.++ ||+|+++..
T Consensus 1 M~~mkI~IiGaG~~G~-----~~a~~L~~~-g~~V~~~~r 34 (335)
T 3ghy_A 1 MSLTRICIVGAGAVGG-----YLGARLALA-GEAINVLAR 34 (335)
T ss_dssp -CCCCEEEESCCHHHH-----HHHHHHHHT-TCCEEEECC
T ss_pred CCCCEEEEECcCHHHH-----HHHHHHHHC-CCEEEEEEC
Confidence 4457899999888884 568889887 999999975
No 128
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=42.42 E-value=34 Score=30.91 Aligned_cols=38 Identities=16% Similarity=-0.059 Sum_probs=34.5
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 10 APHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 10 ~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
+.+|++.+.++..|-....-++..|..+ |++|.++...
T Consensus 123 ~~~vlla~~~gd~HdiG~~iva~~L~~~-G~~Vi~LG~~ 160 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALLRAN-GYNVVDLGRD 160 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHHHHT-TCEEEEEEEE
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHC-CCEEEECCCC
Confidence 4689999999999999999999999776 9999999865
No 129
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=42.25 E-value=1.4e+02 Score=24.53 Aligned_cols=137 Identities=12% Similarity=0.116 Sum_probs=72.2
Q ss_pred cEEEEeccCCCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCCCCCcccccCCCCCCCCCCchhHHhhhcCCCeeeccccc
Q 045267 272 SVLFVSFGSGGTLSCEQLNELALGLEMSEQRFLWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWAP 351 (482)
Q Consensus 272 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ip 351 (482)
+.|-|-+|| ..+-+..++....++.++..+-..+-+-.. .|+.+. .|+.
T Consensus 3 ~~V~Iimgs--~SD~~v~~~a~~~l~~~gi~~ev~V~saHR------------------~p~~~~-----------~~~~ 51 (159)
T 3rg8_A 3 PLVIILMGS--SSDMGHAEKIASELKTFGIEYAIRIGSAHK------------------TAEHVV-----------SMLK 51 (159)
T ss_dssp CEEEEEESS--GGGHHHHHHHHHHHHHTTCEEEEEECCTTT------------------CHHHHH-----------HHHH
T ss_pred CeEEEEECc--HHHHHHHHHHHHHHHHcCCCEEEEEEcccC------------------CHHHHH-----------HHHH
Confidence 356666776 346667888888888898875544433221 344322 1111
Q ss_pred hhhhhhcccccccccccCch----hHHHHhhcCCcEeeccccc-cchhhHHHHH--h-hcceeee-eccCCCCccCHHHH
Q 045267 352 QAQVLSHGSTGGFLCHCGWN----SVLESVVNGVPLIAWPLYA-EQKMNAVILT--E-DVKLALR-PKANENGIVGRDEI 422 (482)
Q Consensus 352 q~~lL~~~~~~~~I~HGG~g----s~~eal~~GvP~v~~P~~~-DQ~~na~rv~--~-~~G~G~~-l~~~~~~~~~~~~l 422 (482)
... ..-..+++|.=.|.. ++.-+ ..-+|+|.+|... +-.... .+. + =.|+.+. + |+..+...+
T Consensus 52 ~a~--~~~~~~ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~d-LlS~vqmp~GvpVatv----~~~~nAa~l 123 (159)
T 3rg8_A 52 EYE--ALDRPKLYITIAGRSNALSGFVDG-FVKGATIACPPPSDSFAGAD-IYSSLRMPSGISPALV----LEPKNAALL 123 (159)
T ss_dssp HHH--TSCSCEEEEEECCSSCCHHHHHHH-HSSSCEEECCCCCCGGGGTH-HHHHHCCCTTCCCEEC----CSHHHHHHH
T ss_pred Hhh--hcCCCcEEEEECCchhhhHHHHHh-ccCCCEEEeeCCCCCCCCcc-HHHHHhCCCCCceEEe----cCchHHHHH
Confidence 111 000122666655543 33333 3568999999643 211122 221 1 0143322 2 223667777
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 045267 423 AKVVKALMEGEQGKEVRNKMKDLKDAAAA 451 (482)
Q Consensus 423 ~~ai~~vl~~~~~~~~r~~a~~l~~~~~~ 451 (482)
+..|-.+ .|+ +++++.+.++++.++
T Consensus 124 A~~Il~~-~d~---~l~~kl~~~r~~~~~ 148 (159)
T 3rg8_A 124 AARIFSL-YDK---EIADSVKSYMESNAQ 148 (159)
T ss_dssp HHHHHTT-TCH---HHHHHHHHHHHHHHH
T ss_pred HHHHHhC-CCH---HHHHHHHHHHHHHHH
Confidence 6666433 465 788888888887775
No 130
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=42.02 E-value=17 Score=35.24 Aligned_cols=59 Identities=17% Similarity=0.257 Sum_probs=40.3
Q ss_pred hhhhhhcccccccccccCchhHHHHhhc----CC-cEeeccccccchhhHHHHHhhcceeeeeccCCCCccCHHHHHHHH
Q 045267 352 QAQVLSHGSTGGFLCHCGWNSVLESVVN----GV-PLIAWPLYAEQKMNAVILTEDVKLALRPKANENGIVGRDEIAKVV 426 (482)
Q Consensus 352 q~~lL~~~~~~~~I~HGG~gs~~eal~~----Gv-P~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai 426 (482)
..++-..++ ++|+=||-||+..|+.. ++ |++.+... . + | -..+ +..+++.+++
T Consensus 108 ~~~~~~~~D--lVIvlGGDGTlL~aa~~~~~~~vpPiLGIN~G-----------~-l--G---FLt~---~~~~~~~~al 165 (388)
T 3afo_A 108 EQDIVNRTD--LLVTLGGDGTILHGVSMFGNTQVPPVLAFALG-----------T-L--G---FLSP---FDFKEHKKVF 165 (388)
T ss_dssp HHHHHHHCS--EEEEEESHHHHHHHHHTTTTSCCCCEEEEECS-----------S-C--C---SSCC---EEGGGHHHHH
T ss_pred hhhcccCCC--EEEEEeCcHHHHHHHHHhcccCCCeEEEEECC-----------C-c--c---cCCc---CChHHHHHHH
Confidence 344556678 99999999999999643 67 78888531 0 1 1 1122 5567888888
Q ss_pred HHHhcC
Q 045267 427 KALMEG 432 (482)
Q Consensus 427 ~~vl~~ 432 (482)
++++++
T Consensus 166 ~~il~g 171 (388)
T 3afo_A 166 QEVISS 171 (388)
T ss_dssp HHHHTT
T ss_pred HHHhcC
Confidence 888865
No 131
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=41.47 E-value=1.4e+02 Score=27.66 Aligned_cols=37 Identities=8% Similarity=-0.001 Sum_probs=25.3
Q ss_pred ccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCC
Q 045267 8 QAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSD 49 (482)
Q Consensus 8 ~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~ 49 (482)
|..|+|+++. +.|.+= ..|++.|.++ ||+|+.++-..
T Consensus 23 ~~~~~vlVtG--atG~iG--~~l~~~L~~~-g~~V~~~~r~~ 59 (351)
T 3ruf_A 23 FSPKTWLITG--VAGFIG--SNLLEKLLKL-NQVVIGLDNFS 59 (351)
T ss_dssp HSCCEEEEET--TTSHHH--HHHHHHHHHT-TCEEEEEECCS
T ss_pred CCCCeEEEEC--CCcHHH--HHHHHHHHHC-CCEEEEEeCCC
Confidence 3456676654 445443 4688889888 99999997543
No 132
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=41.41 E-value=16 Score=33.81 Aligned_cols=32 Identities=22% Similarity=0.138 Sum_probs=25.4
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcC
Q 045267 10 APHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIP 47 (482)
Q Consensus 10 ~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~ 47 (482)
+|+|+|+..|..|. .+|..|.++ ||+|+++..
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~~-g~~V~~~~r 34 (316)
T 2ew2_A 3 AMKIAIAGAGAMGS-----RLGIMLHQG-GNDVTLIDQ 34 (316)
T ss_dssp -CEEEEECCSHHHH-----HHHHHHHHT-TCEEEEECS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHhC-CCcEEEEEC
Confidence 57899998877774 567889887 999999864
No 133
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=41.30 E-value=14 Score=34.42 Aligned_cols=38 Identities=8% Similarity=-0.078 Sum_probs=26.2
Q ss_pred hhhhccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCC-EEEEEcC
Q 045267 4 TLQAQAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHF-LVTFFIP 47 (482)
Q Consensus 4 ~~~~~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH-~Vt~~~~ 47 (482)
+|..+.+|+|.|+..|..| ..+|+.|.++ || +|+++..
T Consensus 18 ~~~~~~~~~I~iIG~G~mG-----~~~A~~L~~~-G~~~V~~~dr 56 (312)
T 3qsg_A 18 LYFQSNAMKLGFIGFGEAA-----SAIASGLRQA-GAIDMAAYDA 56 (312)
T ss_dssp -------CEEEEECCSHHH-----HHHHHHHHHH-SCCEEEEECS
T ss_pred ccccCCCCEEEEECccHHH-----HHHHHHHHHC-CCCeEEEEcC
Confidence 3445556899999888777 4789999888 99 9998854
No 134
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=41.26 E-value=31 Score=30.58 Aligned_cols=40 Identities=15% Similarity=0.208 Sum_probs=35.2
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCC
Q 045267 10 APHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDG 50 (482)
Q Consensus 10 ~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~ 50 (482)
+++|++..-|+.|-..-++.+|..|.++ |++|.++..+.+
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~-G~~V~v~d~D~q 45 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQ-GVRVMAGVVETH 45 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHT-TCCEEEEECCCT
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHC-CCCEEEEEeCCC
Confidence 4678888889999999999999999988 999998887653
No 135
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=41.11 E-value=71 Score=30.35 Aligned_cols=40 Identities=5% Similarity=-0.018 Sum_probs=32.9
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCC
Q 045267 12 HIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPP 52 (482)
Q Consensus 12 ~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~ 52 (482)
.++|+..++.|=..=++.++..+... |..|.|+..+....
T Consensus 63 i~~I~GppGsGKSTLal~la~~~~~~-gg~VlyId~E~s~~ 102 (356)
T 3hr8_A 63 IVEIFGQESSGKTTLALHAIAEAQKM-GGVAAFIDAEHALD 102 (356)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHT-TCCEEEEESSCCCC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhc-CCeEEEEecccccc
Confidence 46777778889999999999999877 99999998775444
No 136
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=40.37 E-value=20 Score=31.54 Aligned_cols=39 Identities=13% Similarity=0.085 Sum_probs=29.8
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCC
Q 045267 12 HIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDG 50 (482)
Q Consensus 12 ~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~ 50 (482)
-+++..-|+.|-..=.+.+|...+.+.|..|.|++.+..
T Consensus 32 l~~i~G~pG~GKT~l~l~~~~~~~~~~~~~v~~~s~E~~ 70 (251)
T 2zts_A 32 TVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEER 70 (251)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSC
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhcCCCceeecccCC
Confidence 477888889999999999886543333888999987743
No 137
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=40.07 E-value=43 Score=29.91 Aligned_cols=40 Identities=10% Similarity=0.183 Sum_probs=26.8
Q ss_pred ccCCEEEEEcCCCCC-----------ChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 8 QAAPHIVLLPSPGMG-----------HLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 8 ~~~~~ili~~~~~~G-----------H~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
|.++||+|+.....+ ...=++.-...|.+. |++|+++++.
T Consensus 1 m~m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~a-G~~V~iaS~~ 51 (244)
T 3kkl_A 1 MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKH-GFEVDFVSET 51 (244)
T ss_dssp --CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTT-TCEEEEEESS
T ss_pred CCCCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 445678887775422 223467777888776 9999999975
No 138
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=39.55 E-value=18 Score=34.71 Aligned_cols=30 Identities=20% Similarity=0.221 Sum_probs=25.6
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEE
Q 045267 10 APHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFF 45 (482)
Q Consensus 10 ~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~ 45 (482)
.|||+|+..|-.| +.+|..|+++ ||+|+++
T Consensus 1 sm~V~IVGaGpaG-----l~~A~~L~~~-G~~v~v~ 30 (412)
T 4hb9_A 1 SMHVGIIGAGIGG-----TCLAHGLRKH-GIKVTIY 30 (412)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHT-TCEEEEE
T ss_pred CCEEEEECcCHHH-----HHHHHHHHhC-CCCEEEE
Confidence 3789999887667 7888999887 9999998
No 139
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1}
Probab=39.48 E-value=35 Score=31.73 Aligned_cols=37 Identities=16% Similarity=0.230 Sum_probs=32.2
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCC
Q 045267 12 HIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSD 49 (482)
Q Consensus 12 ~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~ 49 (482)
-+++..-|+.|-..=++.+|...+.+ |..|.|++.+.
T Consensus 70 l~li~G~pG~GKTtl~l~ia~~~a~~-g~~vl~~slE~ 106 (315)
T 3bh0_A 70 FVLIAARPSMGKTAFALKQAKNMSDN-DDVVNLHSLEM 106 (315)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHTT-TCEEEEEESSS
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHc-CCeEEEEECCC
Confidence 47788888999999999999998777 89999999774
No 140
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=38.66 E-value=41 Score=28.79 Aligned_cols=36 Identities=22% Similarity=0.225 Sum_probs=30.5
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
+||++...|+.|-. =...+.+.|.++ |++|.++.++
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~-g~~V~vv~T~ 37 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEEL-DFSVDLVISR 37 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHT-TCEEEEEECH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHC-CCEEEEEECh
Confidence 46888888888855 578999999887 9999999877
No 141
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=38.63 E-value=90 Score=29.34 Aligned_cols=102 Identities=11% Similarity=0.061 Sum_probs=57.3
Q ss_pred CCEEEEEcCCCCC--C--hHHHHHHHHHHHhcCCCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEecCCCCCCCcchhh
Q 045267 10 APHIVLLPSPGMG--H--LIPLIEFAKRLVHRHHFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLPVSLNDVAEDARA 85 (482)
Q Consensus 10 ~~~ili~~~~~~G--H--~~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 85 (482)
+..|+|.|..+.. . ..-+..|++.|.++ |++|.++..+. +......+...+.... ....+
T Consensus 185 ~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~-g~~vvl~g~~~--e~~~~~~i~~~~~~~~------~~l~g------- 248 (349)
T 3tov_A 185 DILIGFNIGSAVPEKRWPAERFAHVADYFGRL-GYKTVFFGGPM--DLEMVQPVVEQMETKP------IVATG------- 248 (349)
T ss_dssp CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHH-TCEEEECCCTT--THHHHHHHHHTCSSCC------EECTT-------
T ss_pred CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhC-CCeEEEEeCcc--hHHHHHHHHHhccccc------EEeeC-------
Confidence 3457777765432 2 33599999999988 99998865442 2212222222221100 00000
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHhhCCCccEEEeCCCCccHHHHHHHcCCccEEEccch
Q 045267 86 ETVISLTVLRSLPCLRQELTSLVAKATVAALVVDLFGTDAFDVAQEFNISPYIFYPST 143 (482)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~~~~~~pD~vi~D~~~~~~~~~A~~lgIP~v~~~~~~ 143 (482)
.....++.+.+. +.|++|+... +...+|..+|+|+|.++..+
T Consensus 249 --------~~sl~e~~ali~------~a~~~i~~Ds--G~~HlAaa~g~P~v~lfg~t 290 (349)
T 3tov_A 249 --------KFQLGPLAAAMN------RCNLLITNDS--GPMHVGISQGVPIVALYGPS 290 (349)
T ss_dssp --------CCCHHHHHHHHH------TCSEEEEESS--HHHHHHHTTTCCEEEECSSC
T ss_pred --------CCCHHHHHHHHH------hCCEEEECCC--CHHHHHHhcCCCEEEEECCC
Confidence 011234445554 7899996532 24456888999999987644
No 142
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=38.33 E-value=1.7e+02 Score=25.47 Aligned_cols=45 Identities=7% Similarity=0.037 Sum_probs=29.7
Q ss_pred eeeccccch-hhhhhcccccccccccCchhHHHHh---------hcCCcEeeccc
Q 045267 344 MLVPSWAPQ-AQVLSHGSTGGFLCHCGWNSVLESV---------VNGVPLIAWPL 388 (482)
Q Consensus 344 v~~~~~ipq-~~lL~~~~~~~~I~HGG~gs~~eal---------~~GvP~v~~P~ 388 (482)
+.+....+. ..++...+..+++--||.||.-|.. .+++|++++-.
T Consensus 89 ~~~~~~~~~Rk~~~~~~sda~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 89 VRVVADMHERKAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp EEEESSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred ccccCCHHHHHHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 334444442 3334333445778899999988876 57999999864
No 143
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=38.32 E-value=57 Score=28.53 Aligned_cols=104 Identities=12% Similarity=0.116 Sum_probs=51.6
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHhc-CCCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEecCCCCCCCcchhhHHH
Q 045267 10 APHIVLLPSPGMGHLIPLIEFAKRLVHR-HHFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLPVSLNDVAEDARAETV 88 (482)
Q Consensus 10 ~~~ili~~~~~~GH~~P~l~La~~L~~r-~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 88 (482)
++||+++.+|+.+- +.+|.+++.+. .+++|..+.+...... . ..... ..|+.+..++.. .+.
T Consensus 8 ~~ri~vl~SG~gsn---l~all~~~~~~~~~~~I~~Vis~~~~a~-~-l~~A~--~~gIp~~~~~~~--~~~-------- 70 (215)
T 3kcq_A 8 ELRVGVLISGRGSN---LEALAKAFSTEESSVVISCVISNNAEAR-G-LLIAQ--SYGIPTFVVKRK--PLD-------- 70 (215)
T ss_dssp CEEEEEEESSCCHH---HHHHHHHTCCC-CSEEEEEEEESCTTCT-H-HHHHH--HTTCCEEECCBT--TBC--------
T ss_pred CCEEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEeCCcchH-H-HHHHH--HcCCCEEEeCcc--cCC--------
Confidence 45788888776544 44555666332 0278887776422111 0 01111 224554444311 000
Q ss_pred HHHHHHhhhHHHHHHHHHHhhCCCccEEEeCCC-CccHHHHHHHcCCccEEEccc
Q 045267 89 ISLTVLRSLPCLRQELTSLVAKATVAALVVDLF-GTDAFDVAQEFNISPYIFYPS 142 (482)
Q Consensus 89 ~~~~~~~~~~~l~~~l~~~~~~~~pD~vi~D~~-~~~~~~~A~~lgIP~v~~~~~ 142 (482)
.+.+.+.+ ++.+||+||+-.+ ..-...+-+...-.++-++++
T Consensus 71 --------~~~~~~~L----~~~~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 71 --------IEHISTVL----REHDVDLVCLAGFMSILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp --------HHHHHHHH----HHTTCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred --------hHHHHHHH----HHhCCCEEEEeCCceEeCHHHHhhccCCeEEECcc
Confidence 02333334 4559999997654 333445555555566665553
No 144
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=37.81 E-value=27 Score=32.43 Aligned_cols=32 Identities=19% Similarity=0.119 Sum_probs=26.2
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 10 APHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 10 ~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
+|+|+++..+ ....+++++.++ ||+|.++.+.
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~-G~~v~~~~~~ 33 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDE-GFETIAFGSS 33 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHT-TCCEEEESCG
T ss_pred ceEEEEECCh------hHHHHHHHHHhC-CCEEEEEECC
Confidence 4689998876 467889999887 9999998765
No 145
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=37.66 E-value=23 Score=27.94 Aligned_cols=33 Identities=15% Similarity=0.125 Sum_probs=22.2
Q ss_pred hhCCCccEEEeCCCCcc--HHHHHHH---cCCccEEEc
Q 045267 108 VAKATVAALVVDLFGTD--AFDVAQE---FNISPYIFY 140 (482)
Q Consensus 108 ~~~~~pD~vi~D~~~~~--~~~~A~~---lgIP~v~~~ 140 (482)
+++.+||+||.|...+. +..+++. .++|++.++
T Consensus 49 ~~~~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 49 ARKGQFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp HHHCCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred HHhCCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 34569999999986653 4444444 589976543
No 146
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=37.55 E-value=31 Score=32.18 Aligned_cols=34 Identities=24% Similarity=0.404 Sum_probs=27.7
Q ss_pred ccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcC
Q 045267 8 QAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIP 47 (482)
Q Consensus 8 ~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~ 47 (482)
.+.|+|.|+..|..| ..+|+.|.++ ||+|+++..
T Consensus 29 ~~~~~I~iIG~G~mG-----~~~a~~l~~~-G~~V~~~dr 62 (320)
T 4dll_A 29 PYARKITFLGTGSMG-----LPMARRLCEA-GYALQVWNR 62 (320)
T ss_dssp CCCSEEEEECCTTTH-----HHHHHHHHHT-TCEEEEECS
T ss_pred cCCCEEEEECccHHH-----HHHHHHHHhC-CCeEEEEcC
Confidence 345799999988888 5688889887 999998853
No 147
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=37.55 E-value=41 Score=31.57 Aligned_cols=29 Identities=21% Similarity=0.133 Sum_probs=24.1
Q ss_pred cccccccccccCchhHHHHhh------cCCcEeeccc
Q 045267 358 HGSTGGFLCHCGWNSVLESVV------NGVPLIAWPL 388 (482)
Q Consensus 358 ~~~~~~~I~HGG~gs~~eal~------~GvP~v~~P~ 388 (482)
..+ ++|.=||-||+.|++. .++|+.++|.
T Consensus 80 ~~d--~vvv~GGDGTv~~v~~~l~~~~~~~pl~iIP~ 114 (337)
T 2qv7_A 80 NYD--VLIAAGGDGTLNEVVNGIAEKPNRPKLGVIPM 114 (337)
T ss_dssp TCS--EEEEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred CCC--EEEEEcCchHHHHHHHHHHhCCCCCcEEEecC
Confidence 456 8999999999999853 4789999996
No 148
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=37.43 E-value=17 Score=34.08 Aligned_cols=37 Identities=19% Similarity=0.231 Sum_probs=26.4
Q ss_pred hhccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 6 QAQAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 6 ~~~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
..|+.++|.|+..|..| ..+|..|+++ ||+|+++-..
T Consensus 2 ~~~~~~kI~vIGaG~MG-----~~iA~~la~~-G~~V~l~d~~ 38 (319)
T 2dpo_A 2 ASPAAGDVLIVGSGLVG-----RSWAMLFASG-GFRVKLYDIE 38 (319)
T ss_dssp -----CEEEEECCSHHH-----HHHHHHHHHT-TCCEEEECSC
T ss_pred CCCCCceEEEEeeCHHH-----HHHHHHHHHC-CCEEEEEeCC
Confidence 44666789999988887 4678889887 9999998543
No 149
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=37.30 E-value=24 Score=28.76 Aligned_cols=32 Identities=22% Similarity=0.184 Sum_probs=24.7
Q ss_pred EcCCCC-CChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 16 LPSPGM-GHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 16 ~~~~~~-GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
+.-|-. -.+.-.+-++..|.++ ||+|++.+.+
T Consensus 13 LGCPE~Pvq~p~~lYl~~~Lk~~-G~~v~VA~np 45 (157)
T 1kjn_A 13 LGCPESPVQIPLAIYTSHKLKKK-GFRVTVTANP 45 (157)
T ss_dssp CCCSCSTTHHHHHHHHHHHHHHT-TCEEEEEECH
T ss_pred ecCCCCcchhhHHHHHHHHHHhc-CCeeEEecCH
Confidence 333443 5555688999999988 9999999987
No 150
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=37.25 E-value=1.8e+02 Score=26.76 Aligned_cols=103 Identities=21% Similarity=0.256 Sum_probs=54.3
Q ss_pred CCEEEEEcCCCCC---Ch--HHHHHHHHHHHhcCCCEEEEEcCCCCCCchhhhhhhhcCCCc--eeEEEecCCCCCCCcc
Q 045267 10 APHIVLLPSPGMG---HL--IPLIEFAKRLVHRHHFLVTFFIPSDGPPSEAQKSTLESLPSS--INSVFLPVSLNDVAED 82 (482)
Q Consensus 10 ~~~ili~~~~~~G---H~--~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~ 82 (482)
+..|++.|....+ .+ .-+..+++.|.++ |++|.++..+. +......+....+.. .....+. +
T Consensus 180 ~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~-~~~vvl~g~~~--e~~~~~~i~~~~~~~~~~~~~~l~----g---- 248 (348)
T 1psw_A 180 RPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE-GYQVVLFGSAK--DHEAGNEILAALNTEQQAWCRNLA----G---- 248 (348)
T ss_dssp SCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT-TCEEEECCCGG--GHHHHHHHHTTSCHHHHTTEEECT----T----
T ss_pred CcEEEEECCCCccccCCCCHHHHHHHHHHHHHC-CCeEEEEeChh--hHHHHHHHHHhhhhccccceEecc----C----
Confidence 3456676654222 22 3688999999888 99998875442 111111111111100 0000000 0
Q ss_pred hhhHHHHHHHHHhhhHHHHHHHHHHhhCCCccEEEeCCCCccHHHHHHHcCCccEEEccc
Q 045267 83 ARAETVISLTVLRSLPCLRQELTSLVAKATVAALVVDLFGTDAFDVAQEFNISPYIFYPS 142 (482)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~pD~vi~D~~~~~~~~~A~~lgIP~v~~~~~ 142 (482)
.....++.+.+. +.|++|+.. .+...+|..+|+|+|.++..
T Consensus 249 -----------~~sl~e~~ali~------~a~l~I~~D--sg~~HlAaa~g~P~v~lfg~ 289 (348)
T 1psw_A 249 -----------ETQLDQAVILIA------ACKAIVTND--SGLMHVAAALNRPLVALYGP 289 (348)
T ss_dssp -----------TSCHHHHHHHHH------TSSEEEEES--SHHHHHHHHTTCCEEEEESS
T ss_pred -----------cCCHHHHHHHHH------hCCEEEecC--CHHHHHHHHcCCCEEEEECC
Confidence 011234445554 789999654 23455688899999987663
No 151
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=37.12 E-value=36 Score=33.57 Aligned_cols=38 Identities=16% Similarity=0.246 Sum_probs=32.2
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCC
Q 045267 12 HIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSD 49 (482)
Q Consensus 12 ~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~ 49 (482)
-+++...|+.|=..=++.++..+....|..|.|++.+.
T Consensus 205 liiI~G~pG~GKTtl~l~ia~~~~~~~g~~Vl~~s~E~ 242 (454)
T 2r6a_A 205 LIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEM 242 (454)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEEESSS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 57888888999999999999998764489999999774
No 152
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=36.85 E-value=79 Score=30.15 Aligned_cols=41 Identities=5% Similarity=-0.064 Sum_probs=34.5
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCC
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPP 52 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~ 52 (482)
..++|+..++.|-..=.+.++..++++ |..|.|++.+...+
T Consensus 75 ~li~I~G~pGsGKTtlal~la~~~~~~-g~~vlyi~~E~s~~ 115 (366)
T 1xp8_A 75 RITEIYGPESGGKTTLALAIVAQAQKA-GGTCAFIDAEHALD 115 (366)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHHHHT-TCCEEEEESSCCCC
T ss_pred cEEEEEcCCCCChHHHHHHHHHHHHHC-CCeEEEEECCCChh
Confidence 357778888899999999999999877 99999999875444
No 153
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=36.77 E-value=43 Score=30.96 Aligned_cols=29 Identities=17% Similarity=0.044 Sum_probs=24.3
Q ss_pred cccccccccccCchhHHHHhh------cCCcEeeccc
Q 045267 358 HGSTGGFLCHCGWNSVLESVV------NGVPLIAWPL 388 (482)
Q Consensus 358 ~~~~~~~I~HGG~gs~~eal~------~GvP~v~~P~ 388 (482)
..+ ++|.-||-||+.|++. .++|+.++|.
T Consensus 63 ~~d--~vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~ 97 (304)
T 3s40_A 63 KVD--LIIVFGGDGTVFECTNGLAPLEIRPTLAIIPG 97 (304)
T ss_dssp TCS--EEEEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred CCC--EEEEEccchHHHHHHHHHhhCCCCCcEEEecC
Confidence 445 8999999999999864 5789999996
No 154
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=35.79 E-value=36 Score=29.36 Aligned_cols=37 Identities=5% Similarity=0.079 Sum_probs=30.0
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
|||++...|+.|-.. ...|.+.|.++.|++|.++.++
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~ 37 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSK 37 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECc
Confidence 468888888877766 8999999965338999999876
No 155
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=35.70 E-value=19 Score=28.35 Aligned_cols=32 Identities=16% Similarity=0.133 Sum_probs=23.1
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcC
Q 045267 10 APHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIP 47 (482)
Q Consensus 10 ~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~ 47 (482)
.|+|+++.. |.+- ..+++.|.++ ||+|+++..
T Consensus 4 ~m~i~IiG~---G~iG--~~~a~~L~~~-g~~v~~~d~ 35 (140)
T 1lss_A 4 GMYIIIAGI---GRVG--YTLAKSLSEK-GHDIVLIDI 35 (140)
T ss_dssp -CEEEEECC---SHHH--HHHHHHHHHT-TCEEEEEES
T ss_pred CCEEEEECC---CHHH--HHHHHHHHhC-CCeEEEEEC
Confidence 468888854 4443 3578899887 999999864
No 156
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=35.68 E-value=27 Score=32.56 Aligned_cols=37 Identities=14% Similarity=0.032 Sum_probs=28.9
Q ss_pred hhhhccCCEEEEEcCCCCCChHHHHHHHHHHHhcCC-CEEEEEcC
Q 045267 4 TLQAQAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHH-FLVTFFIP 47 (482)
Q Consensus 4 ~~~~~~~~~ili~~~~~~GH~~P~l~La~~L~~r~G-H~Vt~~~~ 47 (482)
.|+.| .|+|.|+..|..| ..+|+.|.++ | |+|+++..
T Consensus 19 ~~~~M-~m~IgvIG~G~mG-----~~lA~~L~~~-G~~~V~~~dr 56 (317)
T 4ezb_A 19 YFQSM-MTTIAFIGFGEAA-----QSIAGGLGGR-NAARLAAYDL 56 (317)
T ss_dssp HHHTS-CCEEEEECCSHHH-----HHHHHHHHTT-TCSEEEEECG
T ss_pred ccccc-CCeEEEECccHHH-----HHHHHHHHHc-CCCeEEEEeC
Confidence 34455 4689999988777 6789999887 9 99998853
No 157
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=35.41 E-value=2e+02 Score=24.10 Aligned_cols=138 Identities=15% Similarity=0.132 Sum_probs=74.5
Q ss_pred cEEEEeccCCCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCCCCCcccccCCCCCCCCCCchhHHhhhcCCCeeeccccc
Q 045267 272 SVLFVSFGSGGTLSCEQLNELALGLEMSEQRFLWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWAP 351 (482)
Q Consensus 272 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ip 351 (482)
+.|-|-+|| ..+-+..++....|+.++..+-..+.+-.. .|+.+. .|+-
T Consensus 8 ~~V~IimgS--~SD~~v~~~a~~~L~~~gi~~ev~V~SaHR------------------~p~~~~-----------~~~~ 56 (174)
T 3lp6_A 8 PRVGVIMGS--DSDWPVMADAAAALAEFDIPAEVRVVSAHR------------------TPEAMF-----------SYAR 56 (174)
T ss_dssp CSEEEEESC--GGGHHHHHHHHHHHHHTTCCEEEEECCTTT------------------CHHHHH-----------HHHH
T ss_pred CeEEEEECc--HHhHHHHHHHHHHHHHcCCCEEEEEECCCC------------------CHHHHH-----------HHHH
Confidence 456666776 346677888888889898875544433211 334322 1111
Q ss_pred hhhhhhcccccccccccCch----hHHHHhhcCCcEeeccccc-cchhhHHHHH--h-hcce--eeeeccCCCCccCHHH
Q 045267 352 QAQVLSHGSTGGFLCHCGWN----SVLESVVNGVPLIAWPLYA-EQKMNAVILT--E-DVKL--ALRPKANENGIVGRDE 421 (482)
Q Consensus 352 q~~lL~~~~~~~~I~HGG~g----s~~eal~~GvP~v~~P~~~-DQ~~na~rv~--~-~~G~--G~~l~~~~~~~~~~~~ 421 (482)
... -...+ ++|.=+|.. ++.-++ .-+|+|.+|... .-......+. + =.|+ +...-.+ ..+...
T Consensus 57 ~a~-~~g~~--ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~I~~---~~nAa~ 129 (174)
T 3lp6_A 57 GAA-ARGLE--VIIAGAGGAAHLPGMVAAA-TPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGG---AGNAGL 129 (174)
T ss_dssp HHH-HHTCC--EEEEEEESSCCHHHHHHHH-CSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECCTTC---HHHHHH
T ss_pred HHH-hCCCC--EEEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEEcCc---chHHHH
Confidence 100 01233 666555533 333333 668999999753 2222222221 1 0343 3222112 266777
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 045267 422 IAKVVKALMEGEQGKEVRNKMKDLKDAAAA 451 (482)
Q Consensus 422 l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~ 451 (482)
++..|-.+ .|+ +++++.+.+++++++
T Consensus 130 lAa~Il~~-~d~---~l~~kl~~~r~~~~~ 155 (174)
T 3lp6_A 130 LAVRMLGA-ANP---QLRARIVAFQDRLAD 155 (174)
T ss_dssp HHHHHHHT-TCH---HHHHHHHHHHHHHHH
T ss_pred HHHHHHhC-CCH---HHHHHHHHHHHHHHH
Confidence 77666544 465 899999998888886
No 158
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=35.16 E-value=47 Score=28.99 Aligned_cols=39 Identities=15% Similarity=-0.063 Sum_probs=34.8
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCC
Q 045267 10 APHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSD 49 (482)
Q Consensus 10 ~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~ 49 (482)
+.+|++.+.+...|-....-++..|..+ |++|.++....
T Consensus 92 ~~~vll~~v~gd~HdiG~~iv~~~l~~~-G~~Vi~LG~~v 130 (215)
T 3ezx_A 92 AGLAITFVAEGDIHDIGHRLVTTMLGAN-GFQIVDLGVDV 130 (215)
T ss_dssp CCEEEEEECTTCCCCHHHHHHHHHHHHT-SCEEEECCSSC
T ss_pred CCeEEEEeCCCChhHHHHHHHHHHHHHC-CCeEEEcCCCC
Confidence 4689999999999999999999999777 99999998653
No 159
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=35.00 E-value=66 Score=30.11 Aligned_cols=30 Identities=17% Similarity=0.007 Sum_probs=24.4
Q ss_pred hcccccccccccCchhHHHHh--------hcCCcEeeccc
Q 045267 357 SHGSTGGFLCHCGWNSVLESV--------VNGVPLIAWPL 388 (482)
Q Consensus 357 ~~~~~~~~I~HGG~gs~~eal--------~~GvP~v~~P~ 388 (482)
..++ ++|.-||-||+.|++ ..++|+.++|.
T Consensus 81 ~~~d--~vvv~GGDGTl~~v~~~l~~~~~~~~~plgiiP~ 118 (332)
T 2bon_A 81 FGVA--TVIAGGGDGTINEVSTALIQCEGDDIPALGILPL 118 (332)
T ss_dssp HTCS--EEEEEESHHHHHHHHHHHHHCCSSCCCEEEEEEC
T ss_pred cCCC--EEEEEccchHHHHHHHHHhhcccCCCCeEEEecC
Confidence 3456 899999999999985 35789999996
No 160
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=35.00 E-value=2.7e+02 Score=27.87 Aligned_cols=33 Identities=9% Similarity=-0.028 Sum_probs=22.4
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 10 APHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 10 ~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
-++++|+. +-.-.+.|++.|.+- |.+|..+...
T Consensus 364 GKrvaI~g-----d~~~~~~la~fL~el-Gm~vv~v~~~ 396 (523)
T 3u7q_B 364 GKRFALWG-----DPDFVMGLVKFLLEL-GCEPVHILCH 396 (523)
T ss_dssp TCEEEEEC-----SHHHHHHHHHHHHHT-TCEEEEEEET
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHc-CCEEEEEEeC
Confidence 46788873 334456777777654 9998888654
No 161
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=34.91 E-value=27 Score=30.45 Aligned_cols=40 Identities=13% Similarity=0.145 Sum_probs=30.5
Q ss_pred ccCCEEEEEcCCCCCChHHHHHHHHHHHh-cCCCEEEEEcCCC
Q 045267 8 QAAPHIVLLPSPGMGHLIPLIEFAKRLVH-RHHFLVTFFIPSD 49 (482)
Q Consensus 8 ~~~~~ili~~~~~~GH~~P~l~La~~L~~-r~GH~Vt~~~~~~ 49 (482)
++++||++...|+.+=+. ...|.+.|.+ + |++|.++.++.
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~lv~~L~~~~-g~~V~vv~T~~ 57 (206)
T 1qzu_A 17 ERKFHVLVGVTGSVAALK-LPLLVSKLLDIP-GLEVAVVTTER 57 (206)
T ss_dssp CSSEEEEEEECSSGGGGT-HHHHHHHHC----CEEEEEEECTG
T ss_pred cCCCEEEEEEeChHHHHH-HHHHHHHHhccc-CCEEEEEECHh
Confidence 445678888888877554 5899999987 6 99999998874
No 162
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=34.85 E-value=2.9e+02 Score=29.49 Aligned_cols=83 Identities=11% Similarity=0.134 Sum_probs=53.1
Q ss_pred ccccccCchhHHHHhhcC-C--cEee--ccccccchhhHHHHHhhcceeeeeccCCCCccCHHHHHHHHHHHhcCCchHH
Q 045267 363 GFLCHCGWNSVLESVVNG-V--PLIA--WPLYAEQKMNAVILTEDVKLALRPKANENGIVGRDEIAKVVKALMEGEQGKE 437 (482)
Q Consensus 363 ~~I~HGG~gs~~eal~~G-v--P~v~--~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~ 437 (482)
+|+.||--+.+.|.++-. . |+-+ +|-.+.-..-...++. .. ++.+.|..++.+++....+..
T Consensus 726 i~~~gGlgsaV~ell~~r~~~~~l~v~G~~d~G~tgtp~eLl~~----------~g---ld~~~Iv~~a~~~l~~~~~~~ 792 (845)
T 3ahc_A 726 LFAYHSYAQDVRGLIYDRPNHDNFHVVGYKEQGSTTTPFDMVRV----------ND---MDRYALQAAALKLIDADKYAD 792 (845)
T ss_dssp EEEESSCHHHHHHHTTTSTTGGGEEEECCCSCCCSCCHHHHHHT----------TT---CSHHHHHHHHHHHHHTTTTHH
T ss_pred eeeecCcHHHHHHHHHhCCCCceEEEEeccCCCCCCCHHHHHHH----------hC---cCHHHHHHHHHHHcchhhHHH
Confidence 555677777777777665 3 4443 4433322222333333 33 899999999999987444567
Q ss_pred HHHHHHHHHHHHHHHhhcCCc
Q 045267 438 VRNKMKDLKDAAAAVLSENGS 458 (482)
Q Consensus 438 ~r~~a~~l~~~~~~a~~~~g~ 458 (482)
+++..+....+.++.+.+.|.
T Consensus 793 ~~~~~~~~~~~~~~~~~~~g~ 813 (845)
T 3ahc_A 793 KIDELNAFRKKAFQFAVDNGY 813 (845)
T ss_dssp HHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHHHHHhCC
Confidence 777777777777777766665
No 163
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=34.54 E-value=48 Score=30.70 Aligned_cols=35 Identities=14% Similarity=0.120 Sum_probs=26.1
Q ss_pred ccCCEEEEEcCCCCCChHHHHHHHHHHHhcCC-CEEEEEcCC
Q 045267 8 QAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHH-FLVTFFIPS 48 (482)
Q Consensus 8 ~~~~~ili~~~~~~GH~~P~l~La~~L~~r~G-H~Vt~~~~~ 48 (482)
|++|+|+++..+.. .+|++.|.+..| ++|..+...
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCS 37 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESC
T ss_pred CccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCC
Confidence 66789999876665 478899977646 888877554
No 164
>2dfa_A Hypothetical UPF0271 protein TTHB195; lactam utilization protein, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} SCOP: c.6.2.5
Probab=34.46 E-value=42 Score=29.98 Aligned_cols=110 Identities=14% Similarity=-0.049 Sum_probs=63.2
Q ss_pred EEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEecCCCCCCCcch-hhHHHHH---
Q 045267 15 LLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLPVSLNDVAEDA-RAETVIS--- 90 (482)
Q Consensus 15 i~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~--- 90 (482)
|.+.+..|+-.-|..-.+.- .+ |.|.+-.++.+.+...+++. .++.+.+++.... -....+.
T Consensus 33 IACGfHAGDp~~M~~tv~lA-~~--~gV~IGAHPgypDl~GFGRR-----------~m~~s~~el~~~v~YQiGAL~a~a 98 (250)
T 2dfa_A 33 LACGFHGGSPGRILEAVRLA-KA--HGVAVGAHPGFPDLVGFGRR-----------EMALSPEEVYADVLYQIGALSAFL 98 (250)
T ss_dssp EECSSSSCCHHHHHHHHHHH-HH--TTCEEEEECCCSCTTTTTCS-----------CCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred hhccccCCCHHHHHHHHHHH-HH--cCCeEecCCCCCcccCCCCC-----------CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 56777779988888877744 33 56888899888774332211 1121111111000 0001111
Q ss_pred ----------------HHHHhhhHHHHHHHHHHhhCCCccEEEeCCCCccHHHHHHHcCCccEE
Q 045267 91 ----------------LTVLRSLPCLRQELTSLVAKATVAALVVDLFGTDAFDVAQEFNISPYI 138 (482)
Q Consensus 91 ----------------~~~~~~~~~l~~~l~~~~~~~~pD~vi~D~~~~~~~~~A~~lgIP~v~ 138 (482)
.......+.+.+.+.+.+....|+++|.-........+|+++|+|++.
T Consensus 99 ~~~G~~l~hVKPHGALYN~~~~d~~~A~av~~av~~~d~~L~l~~l~gs~~~~~A~~~Gl~~~~ 162 (250)
T 2dfa_A 99 KAEGLPLHHVKPHGALYLKACRDRETARAIALAVKAFDPGLPLVVLPGTVYEEEARKAGLRVVL 162 (250)
T ss_dssp HHTTCCCCCBCCCHHHHHHHHHCHHHHHHHHHHHHHHCTTCCEEECTTSHHHHHHHHTTCCEEE
T ss_pred HHcCCEeEEeccCHHHHHHHhhCHHHHHHHHHHHHHhCCCcEEEecCChHHHHHHHHcCCcEEE
Confidence 111223455666666666666899988776555566899999999775
No 165
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=34.32 E-value=18 Score=31.61 Aligned_cols=33 Identities=12% Similarity=0.202 Sum_probs=26.4
Q ss_pred ccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEc
Q 045267 8 QAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFI 46 (482)
Q Consensus 8 ~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~ 46 (482)
|.+|+|.|+..|..| ..+|+.|.++ ||+|+++.
T Consensus 21 m~mmkI~IIG~G~mG-----~~la~~l~~~-g~~V~~v~ 53 (220)
T 4huj_A 21 QSMTTYAIIGAGAIG-----SALAERFTAA-QIPAIIAN 53 (220)
T ss_dssp GGSCCEEEEECHHHH-----HHHHHHHHHT-TCCEEEEC
T ss_pred hcCCEEEEECCCHHH-----HHHHHHHHhC-CCEEEEEE
Confidence 556789999877776 3678889887 99999854
No 166
>1v6t_A Hypothetical UPF0271 protein PH0986; TIM-barrel, lactam utilization protein, structural genomics; 1.70A {Pyrococcus horikoshii} SCOP: c.6.2.5
Probab=33.81 E-value=43 Score=29.99 Aligned_cols=110 Identities=8% Similarity=0.005 Sum_probs=63.2
Q ss_pred EEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEecCCCCCCCcch-hhHHHHH---
Q 045267 15 LLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLPVSLNDVAEDA-RAETVIS--- 90 (482)
Q Consensus 15 i~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~--- 90 (482)
|.+.+..|+-.-|..-.+.- .+ |.|.+-.++.+.+...+++ ..++.+.+++.... -....+.
T Consensus 33 IACGfHAGDp~~M~~tv~lA-~~--~gV~IGAHPgypDl~GFGR-----------R~m~~s~~el~~~v~YQiGAL~a~a 98 (255)
T 1v6t_A 33 VACGWHAGDPLVMRKTVRLA-KE--NDVQVGAHPGYPDLMGFGR-----------RYMKLTPEEARNYILYQVGALYAFA 98 (255)
T ss_dssp EECSSSSCCHHHHHHHHHHH-HH--TTCEEEEECCCSCTTTTTC-----------SCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred hhccccCCCHHHHHHHHHHH-HH--cCCeEecCCCCCcccCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 56777789988888877744 33 5688889988877432221 11121111111000 0001111
Q ss_pred ----------------HHHHhhhHHHHHHHHHHhhCCCccEEEeCCCCccHHHHHHHcCCccEE
Q 045267 91 ----------------LTVLRSLPCLRQELTSLVAKATVAALVVDLFGTDAFDVAQEFNISPYI 138 (482)
Q Consensus 91 ----------------~~~~~~~~~l~~~l~~~~~~~~pD~vi~D~~~~~~~~~A~~lgIP~v~ 138 (482)
.......+.+.+.+.+.+....|+++|.-........+|+++|+|++.
T Consensus 99 ~~~G~~l~hVKPHGALYN~~~~d~~~A~av~~av~~~d~~L~l~~l~gs~~~~~A~~~Gl~~~~ 162 (255)
T 1v6t_A 99 KAEGLELQHVKPHGALYNAMVKEEDLARAVIEGILDFDKDLILVTLSNSRVADIAEEMGLKVAH 162 (255)
T ss_dssp HHTTCCEEEECCCHHHHHHHHHCHHHHHHHHHHHHHHCTTCEEEEETTCHHHHHHHHHTCCEEE
T ss_pred HHcCCEeEEeccCHHHHHHHhhCHHHHHHHHHHHHHhCCCcEEEecCChHHHHHHHHcCCcEEE
Confidence 111223455666666666666899998776555566899999999775
No 167
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=33.73 E-value=54 Score=25.31 Aligned_cols=64 Identities=13% Similarity=0.078 Sum_probs=45.3
Q ss_pred hhcccccccccccCchh---------HHHHhhcCCcEeeccccccchhhHHHHHhhcceeeeeccCCCCccCHHHHHHHH
Q 045267 356 LSHGSTGGFLCHCGWNS---------VLESVVNGVPLIAWPLYAEQKMNAVILTEDVKLALRPKANENGIVGRDEIAKVV 426 (482)
Q Consensus 356 L~~~~~~~~I~HGG~gs---------~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai 426 (482)
+..++ ++|--.|..| +..|...|+|++++=.++.+. .-..+++ .+..+.- ++.+.|.++|
T Consensus 36 I~~~~--~vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~-~a~~iV~-------Wn~~~I~~aI 104 (111)
T 1eiw_A 36 PEDAD--AVIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEA-VSSEVVG-------WNPHCIRDAL 104 (111)
T ss_dssp SSSCS--EEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHH-HCSEEEC-------SCHHHHHHHH
T ss_pred cccCC--EEEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHh-hCceecc-------CCHHHHHHHH
Confidence 55677 8888899888 677889999999986666541 2222444 3333332 7899999999
Q ss_pred HHHh
Q 045267 427 KALM 430 (482)
Q Consensus 427 ~~vl 430 (482)
+..+
T Consensus 105 ~~~~ 108 (111)
T 1eiw_A 105 EDAL 108 (111)
T ss_dssp HHHH
T ss_pred Hhcc
Confidence 8876
No 168
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=33.56 E-value=17 Score=34.76 Aligned_cols=58 Identities=16% Similarity=0.210 Sum_probs=39.3
Q ss_pred hhhhhcccccccccccCchhHHHHhh----cCCcEeeccccccchhhHHHHHhhcceeeeeccCCCCccCHHHHHHHHHH
Q 045267 353 AQVLSHGSTGGFLCHCGWNSVLESVV----NGVPLIAWPLYAEQKMNAVILTEDVKLALRPKANENGIVGRDEIAKVVKA 428 (482)
Q Consensus 353 ~~lL~~~~~~~~I~HGG~gs~~eal~----~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ 428 (482)
.++-..++ ++|+=||-||+..|.. .++|++.+= .|...-..+ ++.+++.+++++
T Consensus 103 ~~~~~~~D--lvI~lGGDGT~L~aa~~~~~~~~PvlGiN-----------------~G~LGFLt~---~~~~~~~~~l~~ 160 (365)
T 3pfn_A 103 DDISNQID--FIICLGGDGTLLYASSLFQGSVPPVMAFH-----------------LGSLGFLTP---FSFENFQSQVTQ 160 (365)
T ss_dssp CCCTTTCS--EEEEESSTTHHHHHHHHCSSSCCCEEEEE-----------------SSSCTTTCC---EESTTHHHHHHH
T ss_pred hhcccCCC--EEEEEcChHHHHHHHHHhccCCCCEEEEc-----------------CCCCcccee---ecHHHHHHHHHH
Confidence 34446778 9999999999999976 357887762 221111223 566778888888
Q ss_pred HhcC
Q 045267 429 LMEG 432 (482)
Q Consensus 429 vl~~ 432 (482)
++++
T Consensus 161 vl~g 164 (365)
T 3pfn_A 161 VIEG 164 (365)
T ss_dssp HHHS
T ss_pred HHcC
Confidence 8765
No 169
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=33.28 E-value=25 Score=33.74 Aligned_cols=37 Identities=14% Similarity=0.258 Sum_probs=28.2
Q ss_pred hhhccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcC
Q 045267 5 LQAQAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIP 47 (482)
Q Consensus 5 ~~~~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~ 47 (482)
|+.|.+.+|+|+..|-.| +.+|..|+++ |++|+++-.
T Consensus 21 M~~~~~~dV~IVGaG~aG-----l~~A~~L~~~-G~~v~v~E~ 57 (398)
T 2xdo_A 21 MNLLSDKNVAIIGGGPVG-----LTMAKLLQQN-GIDVSVYER 57 (398)
T ss_dssp --CCTTCEEEEECCSHHH-----HHHHHHHHTT-TCEEEEEEC
T ss_pred ccccCCCCEEEECCCHHH-----HHHHHHHHHC-CCCEEEEeC
Confidence 455566789999988666 6788899877 999999953
No 170
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=33.13 E-value=81 Score=20.46 Aligned_cols=56 Identities=14% Similarity=0.172 Sum_probs=34.0
Q ss_pred eccCCCCccCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHhh
Q 045267 409 PKANENGIVGRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQLASKWNN 472 (482)
Q Consensus 409 l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~ 472 (482)
.+.+.+|.++.+++...+..+-. .+ ....+...++. .+.++...-..+||++.+..
T Consensus 9 ~D~d~~G~i~~~e~~~~l~~~~~-----~~--~~~~~~~~~~~-~D~~~~g~i~~~ef~~~~~~ 64 (66)
T 3li6_A 9 IDVNGDGAVSYEEVKAFVSKKRA-----IK--NEQLLQLIFKS-IDADGNGEIDQNEFAKFYGS 64 (66)
T ss_dssp HCTTCSSSCCHHHHHHHHHHHHH-----HH--HHHHHHHHHHH-HCTTCSSSCCHHHHHHHHTC
T ss_pred HCCCCCCcccHHHHHHHHHHccC-----CC--cHHHHHHHHHH-HCCCCCCCCCHHHHHHHHHh
Confidence 34566788999999999987621 11 22234444443 34455555667888877654
No 171
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=32.71 E-value=36 Score=27.60 Aligned_cols=35 Identities=17% Similarity=0.092 Sum_probs=26.0
Q ss_pred ccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 8 QAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 8 ~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
...++|+++..|..| ..+++.|.++ |++|+++...
T Consensus 17 ~~~~~v~IiG~G~iG-----~~la~~L~~~-g~~V~vid~~ 51 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLG-----SLIANLASSS-GHSVVVVDKN 51 (155)
T ss_dssp CCCCEEEEECCSHHH-----HHHHHHHHHT-TCEEEEEESC
T ss_pred cCCCcEEEECCCHHH-----HHHHHHHHhC-CCeEEEEECC
Confidence 345789999765545 5578889887 9999998654
No 172
>2w84_A Peroxisomal membrane protein PEX14; zellweger syndrome, alternative splicing, phosphoprotein, protein complex, disease mutation, peroxisome; NMR {Homo sapiens} PDB: 2w85_A
Probab=32.66 E-value=68 Score=22.39 Aligned_cols=57 Identities=19% Similarity=0.240 Sum_probs=37.3
Q ss_pred cCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHhhccCCCccc
Q 045267 417 VGRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQLASKWNNNEGKPCSL 480 (482)
Q Consensus 417 ~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 480 (482)
..++-|..|+. .|.|+ +++.....=+..+-+ ..|-....|++.++........+-||
T Consensus 13 ~Re~li~~Av~-FLqdp---~V~~sp~~~K~~FL~---sKGLt~eEI~~Al~ra~~~~~~p~~~ 69 (70)
T 2w84_A 13 PREPLIATAVK-FLQNS---RVRQSPLATRRAFLK---KKGLTDEEIDMAFQQSGTAADEPSSL 69 (70)
T ss_dssp CCHHHHHHHHH-HHCST---TGGGSCHHHHHHHHH---HTTCCHHHHHHHHHHHTCCCCC----
T ss_pred chHHHHHHHHH-HhCCh---hhhhCCHHHHHHHHH---HcCCCHHHHHHHHHHccCCCCCCccc
Confidence 45566777764 67787 666655554455554 68999999999999877776666665
No 173
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=32.65 E-value=48 Score=27.59 Aligned_cols=39 Identities=26% Similarity=0.341 Sum_probs=31.1
Q ss_pred CCEEEEEcCCCC---CChHHHHHHHHHHHhcCCCEEEEEcCCC
Q 045267 10 APHIVLLPSPGM---GHLIPLIEFAKRLVHRHHFLVTFFIPSD 49 (482)
Q Consensus 10 ~~~ili~~~~~~---GH~~P~l~La~~L~~r~GH~Vt~~~~~~ 49 (482)
..+|+|+|.-+. --..+...|++.|.++ |.+|.|..++.
T Consensus 23 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~-G~~V~faIHPV 64 (180)
T 1pno_A 23 ASKVIIVPGYGMAVAQAQHALREMADVLKKE-GVEVSYAIHPV 64 (180)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHT-TCEEEEEECTT
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeccc
Confidence 457888886433 3456899999999888 99999999884
No 174
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=32.39 E-value=3.2e+02 Score=27.29 Aligned_cols=34 Identities=9% Similarity=0.029 Sum_probs=23.0
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCC
Q 045267 10 APHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSD 49 (482)
Q Consensus 10 ~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~ 49 (482)
-++++++. +-.-.++|++.|.+- |-+|..+....
T Consensus 360 Gkrv~i~g-----d~~~~~~la~~L~El-Gm~vv~v~~~~ 393 (519)
T 1qgu_B 360 GKKFGLYG-----DPDFVMGLTRFLLEL-GCEPTVILSHN 393 (519)
T ss_dssp TCEEEEES-----CHHHHHHHHHHHHHT-TCEEEEEEETT
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHC-CCEEEEEEeCC
Confidence 45788874 334456777777764 99998776553
No 175
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=32.18 E-value=2.3e+02 Score=25.95 Aligned_cols=38 Identities=16% Similarity=0.050 Sum_probs=23.3
Q ss_pred HHHHhhC-CCccEEEeCCCCccH---HHHHHHcCCccEEEcc
Q 045267 104 LTSLVAK-ATVAALVVDLFGTDA---FDVAQEFNISPYIFYP 141 (482)
Q Consensus 104 l~~~~~~-~~pD~vi~D~~~~~~---~~~A~~lgIP~v~~~~ 141 (482)
++.+++. .++|.||........ ...+...|||+|.+..
T Consensus 53 i~~~i~~~~~vDgiIi~~~~~~~~~~~~~~~~~giPvV~~~~ 94 (350)
T 3h75_A 53 ARELFQGRDKPDYLMLVNEQYVAPQILRLSQGSGIKLFIVNS 94 (350)
T ss_dssp HHHHHHSSSCCSEEEEECCSSHHHHHHHHHTTSCCEEEEEES
T ss_pred HHHHHhcCCCCCEEEEeCchhhHHHHHHHHHhCCCcEEEEcC
Confidence 4444444 699998875522222 2345567999888655
No 176
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=32.11 E-value=3e+02 Score=25.26 Aligned_cols=106 Identities=13% Similarity=0.148 Sum_probs=54.6
Q ss_pred cCCEEEEEcCCCCCChHHHHHHHHHHHhc-CCCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEecCCCCCCCcchhhHH
Q 045267 9 AAPHIVLLPSPGMGHLIPLIEFAKRLVHR-HHFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLPVSLNDVAEDARAET 87 (482)
Q Consensus 9 ~~~~ili~~~~~~GH~~P~l~La~~L~~r-~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 87 (482)
+++||+++.++. || -+.+|..+-.+. .+.+|..+.+.... .+.+.. ..|+.+..++... ...
T Consensus 104 ~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~----~~~~A~--~~gIp~~~~~~~~---~~r----- 166 (302)
T 3o1l_A 104 QKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQD----LRSMVE--WHDIPYYHVPVDP---KDK----- 166 (302)
T ss_dssp SCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSST----THHHHH--TTTCCEEECCCCS---SCC-----
T ss_pred CCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHH----HHHHHH--HcCCCEEEcCCCc---CCH-----
Confidence 467899988777 54 455666655221 13688877654321 122222 3356666665321 000
Q ss_pred HHHHHHHhhhHHHHHHHHHHhhCCCccEEEeCCC-CccHHHHHHHcCCccEEEcc
Q 045267 88 VISLTVLRSLPCLRQELTSLVAKATVAALVVDLF-GTDAFDVAQEFNISPYIFYP 141 (482)
Q Consensus 88 ~~~~~~~~~~~~l~~~l~~~~~~~~pD~vi~D~~-~~~~~~~A~~lgIP~v~~~~ 141 (482)
....+.+.+.+ ++.+||+||.-.+ -.-...+.+...-.++-+++
T Consensus 167 ------~~~~~~~~~~l----~~~~~DliVlagym~IL~~~~l~~~~~~~INiHp 211 (302)
T 3o1l_A 167 ------EPAFAEVSRLV----GHHQADVVVLARYMQILPPQLCREYAHQVINIHH 211 (302)
T ss_dssp ------HHHHHHHHHHH----HHTTCSEEEESSCCSCCCTTHHHHTTTCEEEEES
T ss_pred ------HHHHHHHHHHH----HHhCCCEEEHhHhhhhcCHHHHhhhhCCeEEeCc
Confidence 00112333334 4559999997654 33334455555556665554
No 177
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=31.73 E-value=40 Score=30.60 Aligned_cols=32 Identities=13% Similarity=0.097 Sum_probs=24.9
Q ss_pred CCCccEEEeCCCCc------cHHHHHHHcCCccEEEcc
Q 045267 110 KATVAALVVDLFGT------DAFDVAQEFNISPYIFYP 141 (482)
Q Consensus 110 ~~~pD~vi~D~~~~------~~~~~A~~lgIP~v~~~~ 141 (482)
+.+||+||+..... -+..+|..||+|.+....
T Consensus 110 ~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 147 (264)
T 1o97_C 110 KEAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVA 147 (264)
T ss_dssp HHCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred hcCCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceE
Confidence 33899999877554 356899999999887654
No 178
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=31.71 E-value=1e+02 Score=21.89 Aligned_cols=49 Identities=16% Similarity=0.194 Sum_probs=34.9
Q ss_pred hcCCcEeeccccccchhhHH---HHHhhcceeeeeccCCCCccCHHHHHHHHHHHhc
Q 045267 378 VNGVPLIAWPLYAEQKMNAV---ILTEDVKLALRPKANENGIVGRDEIAKVVKALME 431 (482)
Q Consensus 378 ~~GvP~v~~P~~~DQ~~na~---rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~vl~ 431 (482)
-+|+|++++--...|.+... .... -|+...+-+. -++++|...+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqneakk-egvsydvlks----tdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKK-EGVSYDVLKS----TDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHH-HTCEEEEEEC----CCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHh-cCcchhhhcc----CCHHHHHHHHHHHHH
Confidence 48999999887777766433 3344 4676666666 489999999988874
No 179
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=31.69 E-value=40 Score=32.29 Aligned_cols=40 Identities=10% Similarity=0.169 Sum_probs=28.8
Q ss_pred ccCCEEEEEcCCCCC-C---hHHHHHHHHHH-HhcCCCEEEEEcCC
Q 045267 8 QAAPHIVLLPSPGMG-H---LIPLIEFAKRL-VHRHHFLVTFFIPS 48 (482)
Q Consensus 8 ~~~~~ili~~~~~~G-H---~~P~l~La~~L-~~r~GH~Vt~~~~~ 48 (482)
|.||||+++..|..+ | +.....++++| .++ ||+|+.+-..
T Consensus 1 m~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~-g~~v~~i~~~ 45 (377)
T 1ehi_A 1 MTKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATG-KYEIIVFAIA 45 (377)
T ss_dssp --CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHS-SEEEEEEEEC
T ss_pred CCCcEEEEEeCCCCCCcceeHHHHHHHHHHhCccc-CcEEEEEEEc
Confidence 446788888776554 3 34578889999 887 9999998643
No 180
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=31.59 E-value=29 Score=30.54 Aligned_cols=38 Identities=8% Similarity=-0.028 Sum_probs=32.2
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCC
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSD 49 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~ 49 (482)
|+|+|..-|+.|=..=...||..|+++ |++|.++=...
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~-g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASD-YDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTT-CSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 468887777779999999999999887 99999996554
No 181
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=31.46 E-value=1.2e+02 Score=23.79 Aligned_cols=48 Identities=13% Similarity=-0.022 Sum_probs=33.8
Q ss_pred cCCcEeeccccccchhhHHHHHhhcceeeeeccCCCCccCHHHHHHHHHHHhcC
Q 045267 379 NGVPLIAWPLYAEQKMNAVILTEDVKLALRPKANENGIVGRDEIAKVVKALMEG 432 (482)
Q Consensus 379 ~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~vl~~ 432 (482)
..+|+|++--..| ........+ .|+--.+.+. ++.+.|..+|+.++..
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~~-~g~~~~l~kP----~~~~~L~~~i~~~~~~ 121 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQAIQ-DGAYDFIAKP----FAADRLVQSARRAEEK 121 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHHHH-TTCCEEEESS----CCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHHHh-cCCCeEEeCC----CCHHHHHHHHHHHHHH
Confidence 4788888754444 344555556 6776666554 7999999999999864
No 182
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=31.44 E-value=2e+02 Score=28.49 Aligned_cols=39 Identities=13% Similarity=-0.015 Sum_probs=32.6
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCC
Q 045267 12 HIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDG 50 (482)
Q Consensus 12 ~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~ 50 (482)
-+++...|+.|=..=.+.+|..++.++|..|.|++.+..
T Consensus 244 l~li~G~pG~GKT~lal~~a~~~a~~~g~~vl~~s~E~s 282 (503)
T 1q57_A 244 VIMVTSGSGMVMSTFVRQQALQWGTAMGKKVGLAMLEES 282 (503)
T ss_dssp EEEEEESSCHHHHHHHHHHHHHHTTTSCCCEEEEESSSC
T ss_pred EEEEeecCCCCchHHHHHHHHHHHHhcCCcEEEEeccCC
Confidence 477778888999999999999997655899999997753
No 183
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=31.40 E-value=88 Score=27.01 Aligned_cols=44 Identities=11% Similarity=-0.110 Sum_probs=30.0
Q ss_pred cccccCCCCCcEEEEeccCCCCCCHHHHHHHHHHHHhcCCceEE
Q 045267 262 LKWLDDQPLGSVLFVSFGSGGTLSCEQLNELALGLEMSEQRFLW 305 (482)
Q Consensus 262 ~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~ 305 (482)
.+|+.....+.++||..+|......+....+.++|+.+|..+.+
T Consensus 19 ~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~ 62 (206)
T 3l4e_A 19 TEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEE 62 (206)
T ss_dssp HHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEE
Confidence 34543333356999998876444456678899999999987544
No 184
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=31.21 E-value=46 Score=29.98 Aligned_cols=35 Identities=29% Similarity=0.291 Sum_probs=24.8
Q ss_pred ccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 8 QAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 8 ~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
|.+|+|+++. + |.+= ..|++.|.++ ||+|+.++-.
T Consensus 1 M~~~~ilVtG--a-G~iG--~~l~~~L~~~-g~~V~~~~r~ 35 (286)
T 3gpi_A 1 MSLSKILIAG--C-GDLG--LELARRLTAQ-GHEVTGLRRS 35 (286)
T ss_dssp -CCCCEEEEC--C-SHHH--HHHHHHHHHT-TCCEEEEECT
T ss_pred CCCCcEEEEC--C-CHHH--HHHHHHHHHC-CCEEEEEeCC
Confidence 4456788774 4 6433 4678899888 9999999754
No 185
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=31.13 E-value=2.2e+02 Score=24.75 Aligned_cols=33 Identities=24% Similarity=0.323 Sum_probs=24.1
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 12 HIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 12 ~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
++++++.++.| + =.++|+.|+++ |++|.+....
T Consensus 8 k~vlITGas~g-I--G~~~a~~l~~~-G~~v~~~~~~ 40 (255)
T 3icc_A 8 KVALVTGASRG-I--GRAIAKRLAND-GALVAIHYGN 40 (255)
T ss_dssp CEEEETTCSSH-H--HHHHHHHHHHT-TCEEEEEESS
T ss_pred CEEEEECCCCh-H--HHHHHHHHHHC-CCeEEEEeCC
Confidence 57777766654 2 35789999888 9999886543
No 186
>1xw8_A UPF0271 protein YBGL; NESG, northeast structural genomics consortium, structural genomics, protein structure initiative, PSI, X-RAY; 2.00A {Escherichia coli} SCOP: c.6.2.5
Probab=31.11 E-value=49 Score=29.58 Aligned_cols=110 Identities=10% Similarity=0.083 Sum_probs=61.0
Q ss_pred EEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEecCCCCCCCcchh-hHHHHH---
Q 045267 15 LLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLPVSLNDVAEDAR-AETVIS--- 90 (482)
Q Consensus 15 i~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~--- 90 (482)
|.+.+-.|+-.-|..-.+.-++ |.|.+..++.+.+... |.-..++.+.+++....- ....+.
T Consensus 28 IACGfHAGDp~~M~~Tv~lA~~---~gV~IGAHPgypDl~G-----------FGRR~m~~s~~el~~~v~YQiGAL~a~a 93 (252)
T 1xw8_A 28 IACGFHAGDAQIMQACVREAIK---NGVAIGAHPSFPDREN-----------FGRSAMQLPPETVYAQTLYQIGALATIA 93 (252)
T ss_dssp EECSSSSCCHHHHHHHHHHHHH---HTCEEEEECCCC------------------CCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HhhcccCCCHHHHHHHHHHHHH---cCCeeecCCCCCcccC-----------CCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 5567777998888887775433 4578888888777322 222222222111111100 011111
Q ss_pred ----------------HHHHhhhHHHHHHHHHHhhCCCccEEEeCCCCccHHHHHHHcCCccEE
Q 045267 91 ----------------LTVLRSLPCLRQELTSLVAKATVAALVVDLFGTDAFDVAQEFNISPYI 138 (482)
Q Consensus 91 ----------------~~~~~~~~~l~~~l~~~~~~~~pD~vi~D~~~~~~~~~A~~lgIP~v~ 138 (482)
.......+.+.+.+.+.+....|+++|.-........+|+++|+|++.
T Consensus 94 ~~~G~~l~hVKPHGALYN~~a~d~~~A~av~~av~~~d~~L~l~~l~gs~~~~~A~~~Gl~~~~ 157 (252)
T 1xw8_A 94 RAQGGVMRHVKPHGMLYNQAAKEAQLADAIARAVYACDPALILVGLAGSELIRAGKQYGLTTRE 157 (252)
T ss_dssp HHTTCCEEEECCCHHHHHHHTTCHHHHHHHHHHHHHHCTTCEEEEETTSHHHHHHHHTTCCEEE
T ss_pred HHcCCEeEEeCcCHHHHHHHhhCHHHHHHHHHHHHHhCCCcEEEecCChHHHHHHHHcCCcEEE
Confidence 111223556666666666667899998776555566899999999775
No 187
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=30.94 E-value=46 Score=25.33 Aligned_cols=27 Identities=19% Similarity=0.200 Sum_probs=21.1
Q ss_pred CChHHHHHHHHHHHhcCCC-EEEEEcCC
Q 045267 22 GHLIPLIEFAKRLVHRHHF-LVTFFIPS 48 (482)
Q Consensus 22 GH~~P~l~La~~L~~r~GH-~Vt~~~~~ 48 (482)
......+.+|..+.+.+|| +|+++...
T Consensus 16 ~~~~~al~~a~~~~~~~g~~~v~vff~~ 43 (117)
T 1jx7_A 16 ESLFNSLRLAIALREQESNLDLRLFLMS 43 (117)
T ss_dssp SHHHHHHHHHHHHHHHCTTCEEEEEECG
T ss_pred HHHHHHHHHHHHHHhcCCCccEEEEEEc
Confidence 4566789999998765599 99988655
No 188
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=30.89 E-value=87 Score=27.69 Aligned_cols=39 Identities=10% Similarity=0.109 Sum_probs=27.5
Q ss_pred CCEEEEEcCCCC-----------CChHHHHHHHHHHHhcCCCEEEEEcCCC
Q 045267 10 APHIVLLPSPGM-----------GHLIPLIEFAKRLVHRHHFLVTFFIPSD 49 (482)
Q Consensus 10 ~~~ili~~~~~~-----------GH~~P~l~La~~L~~r~GH~Vt~~~~~~ 49 (482)
++||+|+..... -...=+......|.++ |++|+++++..
T Consensus 3 m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~a-g~~v~~~s~~g 52 (243)
T 1rw7_A 3 PKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKE-GFEVDFVSETG 52 (243)
T ss_dssp CCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHC-CCEEEEECCCC
Confidence 346887776422 1445677777888777 99999999763
No 189
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=30.85 E-value=52 Score=27.45 Aligned_cols=39 Identities=26% Similarity=0.384 Sum_probs=31.2
Q ss_pred CCEEEEEcCCCC---CChHHHHHHHHHHHhcCCCEEEEEcCCC
Q 045267 10 APHIVLLPSPGM---GHLIPLIEFAKRLVHRHHFLVTFFIPSD 49 (482)
Q Consensus 10 ~~~ili~~~~~~---GH~~P~l~La~~L~~r~GH~Vt~~~~~~ 49 (482)
..+|+|+|.-+. --..+...|++.|.++ |.+|.|..++.
T Consensus 30 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~-G~~V~faIHPV 71 (186)
T 2bru_C 30 SHSVIITPGYGMAVAQAQYPVAEITEKLRAR-GINVRFGIHPV 71 (186)
T ss_dssp CSEEEEECSBHHHHTTTHHHHHHHHHHHHHH-CCEEEEEECSS
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeccc
Confidence 457888886543 3456899999999988 99999999884
No 190
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=30.71 E-value=47 Score=30.21 Aligned_cols=39 Identities=10% Similarity=0.106 Sum_probs=29.6
Q ss_pred CCEEEEEcC--CCCCChHHHHHHHHHHHhcCCCEEEEEcCCC
Q 045267 10 APHIVLLPS--PGMGHLIPLIEFAKRLVHRHHFLVTFFIPSD 49 (482)
Q Consensus 10 ~~~ili~~~--~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~ 49 (482)
+++++.+.. |+.|-..-...||..|+++ |++|.++=.+.
T Consensus 3 M~kvI~v~s~KGGvGKTT~a~nLA~~La~~-G~~VlliD~D~ 43 (286)
T 2xj4_A 3 ETRVIVVGNEKGGAGKSTIAVHLVTALLYG-GAKVAVIDLDL 43 (286)
T ss_dssp -CEEEEECCSSSCTTHHHHHHHHHHHHHHT-TCCEEEEECCT
T ss_pred CCeEEEEEcCCCCCCHHHHHHHHHHHHHHC-CCcEEEEECCC
Confidence 444444433 6679999999999999988 99999986554
No 191
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A
Probab=30.35 E-value=1e+02 Score=29.27 Aligned_cols=41 Identities=5% Similarity=-0.012 Sum_probs=34.4
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCC
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPP 52 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~ 52 (482)
..+++..-|+.|-..=.+.++..++++ |..|.|++.+...+
T Consensus 64 ~ii~I~G~pGsGKTtLal~la~~~~~~-g~~vlyid~E~s~~ 104 (356)
T 1u94_A 64 RIVEIYGPESSGKTTLTLQVIAAAQRE-GKTCAFIDAEHALD 104 (356)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHHHHT-TCCEEEEESSCCCC
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHC-CCeEEEEeCCCCcc
Confidence 457788888899999999999999887 99999999875444
No 192
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=30.34 E-value=43 Score=30.17 Aligned_cols=32 Identities=13% Similarity=0.018 Sum_probs=24.7
Q ss_pred CCCccEEEeCCCCc------cHHHHHHHcCCccEEEcc
Q 045267 110 KATVAALVVDLFGT------DAFDVAQEFNISPYIFYP 141 (482)
Q Consensus 110 ~~~pD~vi~D~~~~------~~~~~A~~lgIP~v~~~~ 141 (482)
+.+||+||+..... -+..+|..||+|.+....
T Consensus 114 ~~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~ 151 (255)
T 1efv_B 114 KEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFAS 151 (255)
T ss_dssp HHTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred hcCCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceE
Confidence 34799999877554 356899999999887654
No 193
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=30.28 E-value=3.1e+02 Score=24.78 Aligned_cols=88 Identities=7% Similarity=-0.111 Sum_probs=50.6
Q ss_pred cccccccccccCchhHHHHh-----hc---CCcEeeccccccchhhHH-----HHHhhcc-eeeeeccCCCCccCHHHHH
Q 045267 358 HGSTGGFLCHCGWNSVLESV-----VN---GVPLIAWPLYAEQKMNAV-----ILTEDVK-LALRPKANENGIVGRDEIA 423 (482)
Q Consensus 358 ~~~~~~~I~HGG~gs~~eal-----~~---GvP~v~~P~~~DQ~~na~-----rv~~~~G-~G~~l~~~~~~~~~~~~l~ 423 (482)
.++ ++|.--|...+.+.+ .. |+|+-++ |.+..+. .+.+ -+ +-+.+..+.....-...|+
T Consensus 106 ~ad--lViaat~d~~~n~~I~~~Ar~~f~~~i~VNvv----d~pel~~f~~Pa~~~~-g~~l~IaIST~Gksp~lA~~ir 178 (274)
T 1kyq_A 106 AWY--IIMTCIPDHPESARIYHLCKERFGKQQLVNVA----DKPDLCDFYFGANLEI-GDRLQILISTNGLSPRFGALVR 178 (274)
T ss_dssp CEE--EEEECCSCHHHHHHHHHHHHHHHCTTSEEEET----TCGGGBSEECCEEEEE-TTTEEEEEEESSSCHHHHHHHH
T ss_pred CeE--EEEEcCCChHHHHHHHHHHHHhcCCCcEEEEC----CCcccCeeEeeeEEEe-CCCEEEEEECCCCCcHHHHHHH
Confidence 666 777777766444443 33 5555333 4444444 3444 23 3333333331123358889
Q ss_pred HHHHHHh---cCCchHHHHHHHHHHHHHHHHH
Q 045267 424 KVVKALM---EGEQGKEVRNKMKDLKDAAAAV 452 (482)
Q Consensus 424 ~ai~~vl---~~~~~~~~r~~a~~l~~~~~~a 452 (482)
+.|.+.+ .++....+-+.+.++++++++.
T Consensus 179 ~~ie~~l~~~p~~~~~~~~~~l~~~R~~ik~~ 210 (274)
T 1kyq_A 179 DEIRNLFTQMGDLALEDAVVKLGELRRGIRLL 210 (274)
T ss_dssp HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCchhHHHHHHHHHHHHHHHHhh
Confidence 9998888 5343347778888888888874
No 194
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=30.22 E-value=26 Score=32.30 Aligned_cols=32 Identities=19% Similarity=0.101 Sum_probs=26.5
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcC
Q 045267 10 APHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIP 47 (482)
Q Consensus 10 ~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~ 47 (482)
+++|.|+..|..|. .+|+.|.++ ||+|+++..
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~-G~~V~~~dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEW-PGGVTVYDI 46 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTS-TTCEEEECS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHC-CCeEEEEeC
Confidence 46899999888884 678899887 999998854
No 195
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=30.21 E-value=21 Score=28.61 Aligned_cols=33 Identities=15% Similarity=0.231 Sum_probs=26.3
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 10 APHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 10 ~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
+.||+++..|..| ..+|+.|.++ ||+|+++...
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~-g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLAS-DIPLVVIETS 39 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHT-TCCEEEEESC
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHC-CCCEEEEECC
Confidence 3479999877666 4788999887 9999999754
No 196
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=30.16 E-value=2.8e+02 Score=24.37 Aligned_cols=31 Identities=16% Similarity=0.216 Sum_probs=20.5
Q ss_pred CCccEEEeCCCCcc----HHHHHHHcCCccEEEcc
Q 045267 111 ATVAALVVDLFGTD----AFDVAQEFNISPYIFYP 141 (482)
Q Consensus 111 ~~pD~vi~D~~~~~----~~~~A~~lgIP~v~~~~ 141 (482)
.++|.||....... ....+.+.|||+|.+..
T Consensus 63 ~~vdgiI~~~~~~~~~~~~~~~~~~~~iPvV~~~~ 97 (293)
T 3l6u_A 63 LKVDAIFITTLDDVYIGSAIEEAKKAGIPVFAIDR 97 (293)
T ss_dssp TTCSEEEEECSCTTTTHHHHHHHHHTTCCEEEESS
T ss_pred cCCCEEEEecCChHHHHHHHHHHHHcCCCEEEecC
Confidence 48999987654332 23456667999887543
No 197
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=30.15 E-value=46 Score=27.98 Aligned_cols=34 Identities=15% Similarity=0.239 Sum_probs=23.5
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 10 APHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 10 ~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
.|+|+++ |+.|.+ =..|+++|.++ ||+|+.++..
T Consensus 3 ~~~ilVt--GatG~i--G~~l~~~l~~~-g~~V~~~~r~ 36 (206)
T 1hdo_A 3 VKKIAIF--GATGQT--GLTTLAQAVQA-GYEVTVLVRD 36 (206)
T ss_dssp CCEEEEE--STTSHH--HHHHHHHHHHT-TCEEEEEESC
T ss_pred CCEEEEE--cCCcHH--HHHHHHHHHHC-CCeEEEEEeC
Confidence 3566665 444433 25678899888 9999998743
No 198
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=30.14 E-value=71 Score=29.82 Aligned_cols=35 Identities=11% Similarity=0.168 Sum_probs=24.2
Q ss_pred ccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 8 QAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 8 ~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
|++|||+|+..+.++ ....++|.++ ||+|..+.+.
T Consensus 5 ~~~mrivf~Gt~~fa-----~~~L~~L~~~-~~~v~~Vvt~ 39 (318)
T 3q0i_A 5 SQSLRIVFAGTPDFA-----ARHLAALLSS-EHEIIAVYTQ 39 (318)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHTS-SSEEEEEECC
T ss_pred ccCCEEEEEecCHHH-----HHHHHHHHHC-CCcEEEEEcC
Confidence 668899999876433 3456778787 9999877654
No 199
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=29.97 E-value=49 Score=27.62 Aligned_cols=39 Identities=26% Similarity=0.338 Sum_probs=30.9
Q ss_pred CCEEEEEcCCCC---CChHHHHHHHHHHHhcCCCEEEEEcCCC
Q 045267 10 APHIVLLPSPGM---GHLIPLIEFAKRLVHRHHFLVTFFIPSD 49 (482)
Q Consensus 10 ~~~ili~~~~~~---GH~~P~l~La~~L~~r~GH~Vt~~~~~~ 49 (482)
..+|+|+|.-+. --..+...|++.|.++ |.+|.|..++.
T Consensus 22 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~-G~~V~faIHPV 63 (184)
T 1d4o_A 22 ANSIIITPGYGLCAAKAQYPIADLVKMLSEQ-GKKVRFGIHPV 63 (184)
T ss_dssp CSEEEEEECHHHHHTTTHHHHHHHHHHHHHT-TCEEEEEECTT
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeccc
Confidence 457888886433 3456899999999888 99999999884
No 200
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=29.56 E-value=32 Score=32.68 Aligned_cols=34 Identities=12% Similarity=-0.002 Sum_probs=26.1
Q ss_pred hccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEc
Q 045267 7 AQAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFI 46 (482)
Q Consensus 7 ~~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~ 46 (482)
.|..++|+|+..|..| +.+|..|.++ |++|+++-
T Consensus 8 ~m~~~dVvIVGaG~aG-----l~~A~~L~~~-G~~v~viE 41 (379)
T 3alj_A 8 PGKTRRAEVAGGGFAG-----LTAAIALKQN-GWDVRLHE 41 (379)
T ss_dssp ---CCEEEEECCSHHH-----HHHHHHHHHT-TCEEEEEC
T ss_pred CCCCCeEEEECCCHHH-----HHHHHHHHHC-CCCEEEEe
Confidence 4556789999987666 7788889887 99999995
No 201
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A*
Probab=29.27 E-value=2.7e+02 Score=23.84 Aligned_cols=40 Identities=23% Similarity=0.152 Sum_probs=32.0
Q ss_pred hccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcC
Q 045267 7 AQAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIP 47 (482)
Q Consensus 7 ~~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~ 47 (482)
+|+.+-|+|...++.|--.=.-.|++.|..+ |+.|...-.
T Consensus 3 ~m~g~~i~~eG~~gsGKsT~~~~l~~~l~~~-~~~v~~~~~ 42 (213)
T 4edh_A 3 AMTGLFVTLEGPEGAGKSTNRDYLAERLRER-GIEVQLTRE 42 (213)
T ss_dssp --CCEEEEEECSTTSSHHHHHHHHHHHHHTT-TCCEEEEES
T ss_pred CCCceEEEEEcCCCCCHHHHHHHHHHHHHHc-CCCcccccC
Confidence 4666778888888999999999999999877 999965543
No 202
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=29.26 E-value=67 Score=24.88 Aligned_cols=35 Identities=6% Similarity=-0.051 Sum_probs=26.0
Q ss_pred EEEEcCCCCCCh--HHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 13 IVLLPSPGMGHL--IPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 13 ili~~~~~~GH~--~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
+.++..+-+|+. .-.+.+|.++... ||+|.++-..
T Consensus 5 ~~vv~~~P~g~~~~~~al~~a~a~~a~-~~~v~vff~~ 41 (119)
T 2d1p_B 5 AFVFSTAPHGTAAGREGLDALLATSAL-TDDLAVFFIA 41 (119)
T ss_dssp EEEECSCTTTSTHHHHHHHHHHHHHTT-CSCEEEEECG
T ss_pred EEEEcCCCCCcHHHHHHHHHHHHHHhC-CCCEEEEEeh
Confidence 555555666766 5678899999776 9999998654
No 203
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=29.25 E-value=72 Score=24.21 Aligned_cols=40 Identities=18% Similarity=0.153 Sum_probs=28.2
Q ss_pred ccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 8 QAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 8 ~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
|++++|++++..+.|-=.-.-.+-+.+.++ |.++.+-...
T Consensus 1 M~mkkIll~Cg~G~sTS~l~~k~~~~~~~~-gi~~~i~a~~ 40 (106)
T 1e2b_A 1 MEKKHIYLFSSAGMSTSLLVSKMRAQAEKY-EVPVIIEAFP 40 (106)
T ss_dssp CCCEEEEEECSSSTTTHHHHHHHHHHHHHS-CCSEEEEEEC
T ss_pred CCCcEEEEECCCchhHHHHHHHHHHHHHHC-CCCeEEEEec
Confidence 456679988887776555555777778776 9887766533
No 204
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=29.12 E-value=43 Score=30.11 Aligned_cols=31 Identities=6% Similarity=-0.007 Sum_probs=24.4
Q ss_pred CCccEEEeCCCCc------cHHHHHHHcCCccEEEcc
Q 045267 111 ATVAALVVDLFGT------DAFDVAQEFNISPYIFYP 141 (482)
Q Consensus 111 ~~pD~vi~D~~~~------~~~~~A~~lgIP~v~~~~ 141 (482)
.+||+||+..... .+..+|..||+|.+....
T Consensus 112 ~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 148 (252)
T 1efp_B 112 EGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFAS 148 (252)
T ss_dssp HTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEE
T ss_pred cCCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEE
Confidence 3799999877553 356899999999887654
No 205
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=29.06 E-value=51 Score=28.92 Aligned_cols=39 Identities=15% Similarity=0.039 Sum_probs=24.1
Q ss_pred hhccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 6 QAQAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 6 ~~~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
..|.+.+.++++.++.| + =..+++.|.++ |++|.++.-.
T Consensus 2 ~~~~~~k~vlVTGas~g-I--G~~ia~~l~~~-G~~V~~~~r~ 40 (241)
T 1dhr_A 2 AASGEARRVLVYGGRGA-L--GSRCVQAFRAR-NWWVASIDVV 40 (241)
T ss_dssp ----CCCEEEEETTTSH-H--HHHHHHHHHTT-TCEEEEEESS
T ss_pred CccCCCCEEEEECCCcH-H--HHHHHHHHHhC-CCEEEEEeCC
Confidence 33445556666655442 2 35789999888 9999988643
No 206
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=29.05 E-value=33 Score=30.30 Aligned_cols=41 Identities=17% Similarity=0.169 Sum_probs=25.4
Q ss_pred HHHHHHHHHHhhCCCccEEEeCCCCccH---HHHH----HHcCCccEEEc
Q 045267 98 PCLRQELTSLVAKATVAALVVDLFGTDA---FDVA----QEFNISPYIFY 140 (482)
Q Consensus 98 ~~l~~~l~~~~~~~~pD~vi~D~~~~~~---~~~A----~~lgIP~v~~~ 140 (482)
+.+.+.++++ ..+||+|++|...+.. ..+| -.+|+|+|.+.
T Consensus 91 P~~l~al~~L--~~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVA 138 (225)
T 2w36_A 91 PLFLKAWEKL--RTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVA 138 (225)
T ss_dssp HHHHHHHTTC--CSCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred HHHHHHHHhc--CCCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEE
Confidence 3333444443 3489999999987763 2333 34599988743
No 207
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=28.90 E-value=3.7e+02 Score=26.23 Aligned_cols=144 Identities=10% Similarity=-0.038 Sum_probs=73.4
Q ss_pred CcEEEEeccCCCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCCCCCcccccCCCCCCCCCCchhHHhhhcCCCeeecccc
Q 045267 271 GSVLFVSFGSGGTLSCEQLNELALGLEMSEQRFLWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWA 350 (482)
Q Consensus 271 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~i 350 (482)
+.++.|+.|.. -...++.|...+..+.++-... .+.+.+.....++.+..--
T Consensus 13 ~~vlVvGgG~v-------a~~k~~~L~~~ga~V~vi~~~~---------------------~~~~~~l~~~~~i~~~~~~ 64 (457)
T 1pjq_A 13 RDCLIVGGGDV-------AERKARLLLEAGARLTVNALTF---------------------IPQFTVWANEGMLTLVEGP 64 (457)
T ss_dssp CEEEEECCSHH-------HHHHHHHHHHTTBEEEEEESSC---------------------CHHHHHHHTTTSCEEEESS
T ss_pred CEEEEECCCHH-------HHHHHHHHHhCcCEEEEEcCCC---------------------CHHHHHHHhcCCEEEEECC
Confidence 55888887742 2234455556787776654321 1222222222233332111
Q ss_pred chhhhhhcccccccccccCchh-----HHHHhhcCCcEeeccccccchhhHHHH-----Hh-hcceeeeeccCCCCccCH
Q 045267 351 PQAQVLSHGSTGGFLCHCGWNS-----VLESVVNGVPLIAWPLYAEQKMNAVIL-----TE-DVKLALRPKANENGIVGR 419 (482)
Q Consensus 351 pq~~lL~~~~~~~~I~HGG~gs-----~~eal~~GvP~v~~P~~~DQ~~na~rv-----~~-~~G~G~~l~~~~~~~~~~ 419 (482)
-+...|..++ ++|.--|.-. ..+|-..|+|+-++ |.+..+... .+ ..-+|+. .+.....-.
T Consensus 65 ~~~~~l~~~~--lVi~at~~~~~n~~i~~~a~~~~i~vn~~----d~~e~~~~~~pa~~~~~~l~iaIs--T~Gksp~la 136 (457)
T 1pjq_A 65 FDETLLDSCW--LAIAATDDDTVNQRVSDAAESRRIFCNVV----DAPKAASFIMPSIIDRSPLMVAVS--SGGTSPVLA 136 (457)
T ss_dssp CCGGGGTTCS--EEEECCSCHHHHHHHHHHHHHTTCEEEET----TCTTSSSEECCEEEEETTEEEEEE--CTTSCHHHH
T ss_pred CCccccCCcc--EEEEcCCCHHHHHHHHHHHHHcCCEEEEC----CCcccCceEeeeEEEeCCeEEEEE--CCCCChHHH
Confidence 1233455677 7777777654 44566679986333 333333221 12 0234444 222001225
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 045267 420 DEIAKVVKALMEGEQGKEVRNKMKDLKDAAAA 451 (482)
Q Consensus 420 ~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~ 451 (482)
..|++.|.+.+.+. ...+-+.+.++++++++
T Consensus 137 ~~ir~~ie~~l~~~-~~~~~~~~~~~R~~~~~ 167 (457)
T 1pjq_A 137 RLLREKLESLLPQH-LGQVARYAGQLRARVKK 167 (457)
T ss_dssp HHHHHHHHHHSCTT-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcchh-HHHHHHHHHHHHHHHHh
Confidence 78888888888542 22566667777777765
No 208
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=28.53 E-value=2.9e+02 Score=23.88 Aligned_cols=106 Identities=8% Similarity=0.029 Sum_probs=0.0
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHhcCC---CEEEEEcCCCCCCchhhhhhhhcCCCceeEEEec-CCCCCCCcchhh
Q 045267 10 APHIVLLPSPGMGHLIPLIEFAKRLVHRHH---FLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLP-VSLNDVAEDARA 85 (482)
Q Consensus 10 ~~~ili~~~~~~GH~~P~l~La~~L~~r~G---H~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~ 85 (482)
++||+++.++.. .-+.+|..+. ++ | .+|..+.+..... ......... |+.+..++ .....
T Consensus 2 m~riavl~Sg~G---snl~ali~~~-~~-~~l~~eI~~Visn~~~a--~v~~~A~~~--gIp~~~~~~~~~~~------- 65 (211)
T 3p9x_A 2 MKRVAIFASGSG---TNAEAIIQSQ-KA-GQLPCEVALLITDKPGA--KVVERVKVH--EIPVCALDPKTYPS------- 65 (211)
T ss_dssp -CEEEEECCTTC---HHHHHHHHHH-HT-TCCSSEEEEEEESCSSS--HHHHHHHTT--TCCEEECCGGGSSS-------
T ss_pred CCEEEEEEeCCc---hHHHHHHHHH-Hc-CCCCcEEEEEEECCCCc--HHHHHHHHc--CCCEEEeChhhcCc-------
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHhhCCCccEEE-eCCCCccHHHHHHHcCCccEEEccc
Q 045267 86 ETVISLTVLRSLPCLRQELTSLVAKATVAALV-VDLFGTDAFDVAQEFNISPYIFYPS 142 (482)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~~~~~~pD~vi-~D~~~~~~~~~A~~lgIP~v~~~~~ 142 (482)
.+...+.+.+.+++.+||+|| +.+...-...+-+.....++-++++
T Consensus 66 -----------r~~~d~~~~~~l~~~~~Dliv~agy~~Il~~~~l~~~~~~~iNiHpS 112 (211)
T 3p9x_A 66 -----------KEAYEIEVVQQLKEKQIDFVVLAGYMRLVGPTLLGAYEGRIVNIHPS 112 (211)
T ss_dssp -----------HHHHHHHHHHHHHHTTCCEEEESSCCSCCCHHHHHHHTTSEEEEESS
T ss_pred -----------hhhhHHHHHHHHHhcCCCEEEEeCchhhcCHHHHhhccCCeEEECCc
No 209
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=28.39 E-value=37 Score=30.16 Aligned_cols=33 Identities=12% Similarity=0.093 Sum_probs=27.5
Q ss_pred cCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcC
Q 045267 9 AAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIP 47 (482)
Q Consensus 9 ~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~ 47 (482)
.+|+|.|+..|..|- .||+.|.++ ||+|+.+..
T Consensus 5 ~~mkI~IIG~G~~G~-----sLA~~L~~~-G~~V~~~~~ 37 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTV-----NMAEKLDSV-GHYVTVLHA 37 (232)
T ss_dssp CCCEEEEECCSCCCS-----CHHHHHHHT-TCEEEECSS
T ss_pred CCcEEEEEeeCHHHH-----HHHHHHHHC-CCEEEEecC
Confidence 457999999999985 588999887 999998754
No 210
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=28.18 E-value=41 Score=31.17 Aligned_cols=32 Identities=16% Similarity=0.216 Sum_probs=26.3
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
|+|+|+..|+.|- .+|..|.++ ||+|+++...
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~-g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRS-GEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHT-SCCEEEECST
T ss_pred CEEEEECcCHHHH-----HHHHHHHHC-CCeEEEEEcC
Confidence 5799999999985 467888877 9999999865
No 211
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=28.11 E-value=54 Score=27.92 Aligned_cols=39 Identities=26% Similarity=0.341 Sum_probs=30.8
Q ss_pred CCEEEEEcCCCC---CChHHHHHHHHHHHhcCCCEEEEEcCCC
Q 045267 10 APHIVLLPSPGM---GHLIPLIEFAKRLVHRHHFLVTFFIPSD 49 (482)
Q Consensus 10 ~~~ili~~~~~~---GH~~P~l~La~~L~~r~GH~Vt~~~~~~ 49 (482)
..+|+|+|.-+. =-..+...|++.|.++ |.+|.|..++.
T Consensus 46 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~-G~~V~faIHPV 87 (203)
T 2fsv_C 46 ASKVIIVPGYGMAVAQAQHALREMADVLKKE-GVEVSYAIHPV 87 (203)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHT-TCEEEEEECTT
T ss_pred CCcEEEEcCchHhHHHHHHHHHHHHHHHHHc-CCeEEEEeccc
Confidence 457888886433 3456889999999888 99999999884
No 212
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=27.96 E-value=73 Score=25.04 Aligned_cols=35 Identities=11% Similarity=0.094 Sum_probs=25.2
Q ss_pred EEEEcCCCCC--ChHHHHHHHHHHHhcCCCEE-EEEcCC
Q 045267 13 IVLLPSPGMG--HLIPLIEFAKRLVHRHHFLV-TFFIPS 48 (482)
Q Consensus 13 ili~~~~~~G--H~~P~l~La~~L~~r~GH~V-t~~~~~ 48 (482)
+++++.+.+| .....+.+|.++.+. ||+| +++-..
T Consensus 4 ~iiv~~~p~~~~~~~~al~~a~a~~~~-g~~v~~vff~~ 41 (130)
T 2hy5_A 4 ALQINEGPYQHQASDSAYQFAKAALEK-GHEIFRVFFYH 41 (130)
T ss_dssp EEEECSCTTTSTHHHHHHHHHHHHHHT-TCEEEEEEECG
T ss_pred EEEEeCCCCCcHHHHHHHHHHHHHHhc-CCeeCEEEEec
Confidence 3444555454 456789999999998 9999 888644
No 213
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=27.75 E-value=39 Score=30.77 Aligned_cols=33 Identities=18% Similarity=0.248 Sum_probs=26.3
Q ss_pred ccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEc
Q 045267 8 QAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFI 46 (482)
Q Consensus 8 ~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~ 46 (482)
|+.++|.|+..|..| ..+|+.|+++ ||+|+++.
T Consensus 2 m~~~kV~VIGaG~mG-----~~iA~~la~~-G~~V~l~d 34 (283)
T 4e12_A 2 TGITNVTVLGTGVLG-----SQIAFQTAFH-GFAVTAYD 34 (283)
T ss_dssp CSCCEEEEECCSHHH-----HHHHHHHHHT-TCEEEEEC
T ss_pred CCCCEEEEECCCHHH-----HHHHHHHHhC-CCeEEEEe
Confidence 445689999877777 4688889887 99999984
No 214
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=27.67 E-value=52 Score=30.73 Aligned_cols=32 Identities=19% Similarity=0.023 Sum_probs=27.1
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEc
Q 045267 10 APHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFI 46 (482)
Q Consensus 10 ~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~ 46 (482)
++||.|+..+..| +-.+|+-|.++ ||+|+..=
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~-G~~V~~~D 35 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEA-GFEVSGCD 35 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHT-TCEEEEEE
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhC-CCEEEEEc
Confidence 5689999999888 55789999888 99999874
No 215
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=27.49 E-value=68 Score=28.69 Aligned_cols=38 Identities=13% Similarity=0.157 Sum_probs=25.4
Q ss_pred hhccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcC
Q 045267 6 QAQAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIP 47 (482)
Q Consensus 6 ~~~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~ 47 (482)
+.|.+.++++++.++.| + =.++|++|+++ |++|.+...
T Consensus 21 ~~m~~~k~vlITGas~g-I--G~a~a~~l~~~-G~~V~~~~~ 58 (272)
T 4e3z_A 21 QSMSDTPVVLVTGGSRG-I--GAAVCRLAARQ-GWRVGVNYA 58 (272)
T ss_dssp ---CCSCEEEETTTTSH-H--HHHHHHHHHHT-TCEEEEEES
T ss_pred hhccCCCEEEEECCCch-H--HHHHHHHHHHC-CCEEEEEcC
Confidence 34555667888766543 2 35889999988 999988743
No 216
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=27.36 E-value=33 Score=32.68 Aligned_cols=33 Identities=18% Similarity=0.180 Sum_probs=27.5
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 10 APHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 10 ~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
+|+|.|+..|..|. .+|..|+++ ||+|++....
T Consensus 29 ~mkI~VIGaG~mG~-----alA~~La~~-G~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWGT-----ALALVLARK-GQKVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHHH-----HHHHHHHTT-TCCEEEECSC
T ss_pred CCeEEEECccHHHH-----HHHHHHHHC-CCeEEEEeCC
Confidence 57899999988884 588889887 9999998754
No 217
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=27.33 E-value=43 Score=31.17 Aligned_cols=33 Identities=18% Similarity=0.273 Sum_probs=27.2
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCC
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSD 49 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~ 49 (482)
|+|+|+..|+.|- .+|..|.++ ||+|+++....
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~-g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGS-----FYGALLAKT-GHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHHT-TCEEEEECSTT
T ss_pred CEEEEECcCHHHH-----HHHHHHHhC-CCeEEEEeCCh
Confidence 6899999998885 567888877 99999998653
No 218
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=27.31 E-value=57 Score=27.88 Aligned_cols=39 Identities=26% Similarity=0.347 Sum_probs=30.9
Q ss_pred CCEEEEEcCCCC---CChHHHHHHHHHHHhcCCCEEEEEcCCC
Q 045267 10 APHIVLLPSPGM---GHLIPLIEFAKRLVHRHHFLVTFFIPSD 49 (482)
Q Consensus 10 ~~~ili~~~~~~---GH~~P~l~La~~L~~r~GH~Vt~~~~~~ 49 (482)
..+|+|+|.-+. =-..+...|++.|.++ |.+|.|..++.
T Consensus 45 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~-G~~V~faIHPV 86 (207)
T 1djl_A 45 ANSIIITPGYGLCAAKAQYPIADLVKMLTEQ-GKKVRFGIHPV 86 (207)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHT-TCEEEEEECTT
T ss_pred CCeEEEECCchHHHHHHhHHHHHHHHHHHHC-CCeEEEEeCcc
Confidence 457888886433 3456789999999888 99999999884
No 219
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=27.12 E-value=37 Score=31.59 Aligned_cols=31 Identities=10% Similarity=0.199 Sum_probs=25.1
Q ss_pred cCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEE
Q 045267 9 AAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFF 45 (482)
Q Consensus 9 ~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~ 45 (482)
.+++|+|+..|+.|. .+|..|.++ ||+|+++
T Consensus 18 ~~~kI~IiGaGa~G~-----~~a~~L~~~-G~~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGC-----YYGGMLARA-GHEVILI 48 (318)
T ss_dssp --CEEEEESCSHHHH-----HHHHHHHHT-TCEEEEE
T ss_pred cCCcEEEECcCHHHH-----HHHHHHHHC-CCeEEEE
Confidence 357899999998884 578889887 9999999
No 220
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=27.09 E-value=40 Score=31.23 Aligned_cols=35 Identities=20% Similarity=0.189 Sum_probs=27.4
Q ss_pred hccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcC
Q 045267 7 AQAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIP 47 (482)
Q Consensus 7 ~~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~ 47 (482)
..++|+|.|+..|..| ..+|+.|.++ ||+|+++..
T Consensus 18 ~~~m~~I~iIG~G~mG-----~~~A~~l~~~-G~~V~~~dr 52 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMG-----KAMSMNLLKN-GFKVTVWNR 52 (310)
T ss_dssp CCCSCEEEEECCSHHH-----HHHHHHHHHT-TCEEEEECS
T ss_pred cccCCEEEEECccHHH-----HHHHHHHHHC-CCeEEEEeC
Confidence 3445789999887777 5678899887 999998853
No 221
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=27.04 E-value=74 Score=26.78 Aligned_cols=39 Identities=15% Similarity=0.167 Sum_probs=25.2
Q ss_pred ccCCEEEEEcCCCCCChHHHHH-HHHHHHhcCCCEEEEEcC
Q 045267 8 QAAPHIVLLPSPGMGHLIPLIE-FAKRLVHRHHFLVTFFIP 47 (482)
Q Consensus 8 ~~~~~ili~~~~~~GH~~P~l~-La~~L~~r~GH~Vt~~~~ 47 (482)
|.+|+|+++-+...|+..-+.. +++.|.+. |++|.++.-
T Consensus 3 M~M~kilii~~S~~g~T~~la~~i~~~l~~~-g~~v~~~~l 42 (200)
T 2a5l_A 3 MSSPYILVLYYSRHGATAEMARQIARGVEQG-GFEARVRTV 42 (200)
T ss_dssp --CCEEEEEECCSSSHHHHHHHHHHHHHHHT-TCEEEEEBC
T ss_pred CCcceEEEEEeCCCChHHHHHHHHHHHHhhC-CCEEEEEEh
Confidence 3345677766655787766554 56667666 999998853
No 222
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=27.00 E-value=2.2e+02 Score=27.64 Aligned_cols=34 Identities=24% Similarity=0.392 Sum_probs=24.9
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 10 APHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 10 ~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
+|+|+++..+. ...++++.|+++.|++++++.+.
T Consensus 24 ~~~IlIlG~g~-----r~~al~~~~a~~~g~~~v~~~~~ 57 (452)
T 2qk4_A 24 AARVLIIGSGG-----REHTLAWKLAQSHHVKQVLVAPG 57 (452)
T ss_dssp SEEEEEEECSH-----HHHHHHHHHTTCTTEEEEEEEEC
T ss_pred CcEEEEECCCH-----HHHHHHHHHHhcCCCCEEEEECC
Confidence 45899998763 35678888877668888777654
No 223
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=26.78 E-value=63 Score=28.57 Aligned_cols=35 Identities=11% Similarity=-0.027 Sum_probs=22.7
Q ss_pred hCCCccEEEeCCCC--ccHHHHHHHc----CCccEEEccch
Q 045267 109 AKATVAALVVDLFG--TDAFDVAQEF----NISPYIFYPST 143 (482)
Q Consensus 109 ~~~~pD~vi~D~~~--~~~~~~A~~l----gIP~v~~~~~~ 143 (482)
+.++||++|+-.-. ..++..|+++ |+|+++++-.+
T Consensus 61 ~~~~pDfvI~isPN~a~PGP~~ARE~l~~~~iP~IvI~D~p 101 (283)
T 1qv9_A 61 EDFEPDFIVYGGPNPAAPGPSKAREMLADSEYPAVIIGDAP 101 (283)
T ss_dssp HHHCCSEEEEECSCTTSHHHHHHHHHHHTSSSCEEEEEEGG
T ss_pred hhcCCCEEEEECCCCCCCCchHHHHHHHhCCCCEEEEcCCc
Confidence 44599998854433 3355566653 99999876654
No 224
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=26.66 E-value=39 Score=32.38 Aligned_cols=35 Identities=11% Similarity=0.154 Sum_probs=26.6
Q ss_pred ccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 8 QAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 8 ~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
|++++|+|+..|..| +..|..|.++ ||+|+++-..
T Consensus 1 m~~~~v~iiG~G~~G-----l~~A~~l~~~-g~~v~v~E~~ 35 (384)
T 2bi7_A 1 MKSKKILIVGAGFSG-----AVIGRQLAEK-GHQVHIIDQR 35 (384)
T ss_dssp -CCCEEEEECCSHHH-----HHHHHHHHTT-TCEEEEEESS
T ss_pred CCcCCEEEECcCHHH-----HHHHHHHHHC-CCcEEEEEec
Confidence 456789998877543 6788899887 9999999644
No 225
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=26.66 E-value=45 Score=31.13 Aligned_cols=38 Identities=11% Similarity=0.046 Sum_probs=27.5
Q ss_pred CE-EEEEcCCCCCCh--------------HHHHHHHHHHHhcCCCEEEEEcCCC
Q 045267 11 PH-IVLLPSPGMGHL--------------IPLIEFAKRLVHRHHFLVTFFIPSD 49 (482)
Q Consensus 11 ~~-ili~~~~~~GH~--------------~P~l~La~~L~~r~GH~Vt~~~~~~ 49 (482)
++ |++...|+.=.+ .-=.+||+++.++ |++|+|++.+.
T Consensus 37 k~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~-Ga~V~lv~g~~ 89 (313)
T 1p9o_A 37 RRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAA-GYGVLFLYRAR 89 (313)
T ss_dssp CCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHT-TCEEEEEEETT
T ss_pred CeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHC-CCEEEEEecCC
Confidence 45 777777764444 1345789999998 99999998653
No 226
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=26.28 E-value=2.8e+02 Score=22.93 Aligned_cols=141 Identities=16% Similarity=0.174 Sum_probs=74.0
Q ss_pred cEEEEeccCCCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCCCCCcccccCCCCCCCCCCchhHHhhhcCCCeeeccccc
Q 045267 272 SVLFVSFGSGGTLSCEQLNELALGLEMSEQRFLWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWAP 351 (482)
Q Consensus 272 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ip 351 (482)
+.|-|-+|| ..+.+..++....|+.++..+-..+-+-.. .|+.+. .|+-
T Consensus 4 ~~V~Iimgs--~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR------------------~p~~~~-----------~~~~ 52 (163)
T 3ors_A 4 MKVAVIMGS--SSDWKIMQESCNMLDYFEIPYEKQVVSAHR------------------TPKMMV-----------QFAS 52 (163)
T ss_dssp CCEEEEESC--GGGHHHHHHHHHHHHHTTCCEEEEECCTTT------------------SHHHHH-----------HHHH
T ss_pred CeEEEEECc--HHHHHHHHHHHHHHHHcCCCEEEEEECCcC------------------CHHHHH-----------HHHH
Confidence 356666776 346677888888889998875544433221 334322 1110
Q ss_pred hhhhhhcccccccccccCch----hHHHHhhcCCcEeeccccccc-hhhHHHHHh---hcce--eeeeccCCCCccCHHH
Q 045267 352 QAQVLSHGSTGGFLCHCGWN----SVLESVVNGVPLIAWPLYAEQ-KMNAVILTE---DVKL--ALRPKANENGIVGRDE 421 (482)
Q Consensus 352 q~~lL~~~~~~~~I~HGG~g----s~~eal~~GvP~v~~P~~~DQ-~~na~rv~~---~~G~--G~~l~~~~~~~~~~~~ 421 (482)
... -...+ ++|.=.|.. ++.-++ .-+|+|.+|..... ......+.- =.|+ +.. ..++.+..+...
T Consensus 53 ~a~-~~g~~--ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV-~I~~a~~~nAa~ 127 (163)
T 3ors_A 53 EAR-ERGIN--IIIAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATT-AIGAAGAKNAGI 127 (163)
T ss_dssp HTT-TTTCC--EEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEEC-CSTHHHHHHHHH
T ss_pred HHH-hCCCc--EEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCceEEE-EcCCcccHHHHH
Confidence 000 01123 566555533 333333 66899999975431 122222211 0344 333 221001156666
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHHH
Q 045267 422 IAKVVKALMEGEQGKEVRNKMKDLKDAAAAV 452 (482)
Q Consensus 422 l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a 452 (482)
++..|-.+ .|+ +++++.+.+++++++.
T Consensus 128 lAa~Il~~-~d~---~l~~kl~~~r~~~~~~ 154 (163)
T 3ors_A 128 LAARMLSI-QNP---SLVEKLNQYESSLIQK 154 (163)
T ss_dssp HHHHHHHT-TCT---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHhC-CCH---HHHHHHHHHHHHHHHH
Confidence 66666544 566 8999999998888863
No 227
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=26.27 E-value=67 Score=29.16 Aligned_cols=44 Identities=14% Similarity=-0.052 Sum_probs=34.8
Q ss_pred ccCCEEEEEcCCC---CCChHHHHHHHHHHHhcCCCEEEEEcCCCCCC
Q 045267 8 QAAPHIVLLPSPG---MGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPP 52 (482)
Q Consensus 8 ~~~~~ili~~~~~---~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~ 52 (482)
|.+||.+|++.|- .|-=.-..+|+..|..| |++|+..=-+++..
T Consensus 20 ~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~-G~~Vt~~K~DPYlN 66 (295)
T 2vo1_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKSC-GLHVTSIKIDPYIN 66 (295)
T ss_dssp -CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHT-TCCEEEEEEECSSC
T ss_pred cccceEEEEcCCcccccccHHHHHHHHHHHHHC-CCcceeeeccccee
Confidence 5577899998874 46677899999999888 99999997665544
No 228
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=26.23 E-value=28 Score=34.97 Aligned_cols=35 Identities=23% Similarity=0.416 Sum_probs=27.8
Q ss_pred cCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCC
Q 045267 9 AAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSD 49 (482)
Q Consensus 9 ~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~ 49 (482)
+|.||+|+..|..| +.+|+.|.++ |++||++...+
T Consensus 41 ~KprVVIIGgG~AG-----l~~A~~L~~~-~~~VtLId~~~ 75 (502)
T 4g6h_A 41 DKPNVLILGSGWGA-----ISFLKHIDTK-KYNVSIISPRS 75 (502)
T ss_dssp SSCEEEEECSSHHH-----HHHHHHSCTT-TCEEEEEESSS
T ss_pred CCCCEEEECCcHHH-----HHHHHHhhhC-CCcEEEECCCC
Confidence 45789999877655 5788999776 99999998654
No 229
>3cmu_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 4.20A {Escherichia coli}
Probab=26.14 E-value=2e+02 Score=34.15 Aligned_cols=42 Identities=5% Similarity=-0.008 Sum_probs=35.7
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCC
Q 045267 10 APHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPP 52 (482)
Q Consensus 10 ~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~ 52 (482)
...|+++..++.|-..=.++++.+..++ |++|.|+..+....
T Consensus 1427 g~~vll~GppGtGKT~LA~ala~ea~~~-G~~v~Fi~~e~~~~ 1468 (2050)
T 3cmu_A 1427 GRIVEIYGPESSGKTTLTLQVIAAAQRE-GKTCAFIDAEHALD 1468 (2050)
T ss_dssp TSEEEEECCTTSSHHHHHHHHHHHHHTT-TCCEEEECTTSCCC
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHc-CCcEEEEEcccccC
Confidence 3468888888999999999999999877 99999999875544
No 230
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=26.10 E-value=75 Score=26.79 Aligned_cols=37 Identities=19% Similarity=0.177 Sum_probs=25.7
Q ss_pred CCEEEEEcCCCCCChHHHHH-HHHHHHhcCCCEEEEEcCC
Q 045267 10 APHIVLLPSPGMGHLIPLIE-FAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 10 ~~~ili~~~~~~GH~~P~l~-La~~L~~r~GH~Vt~~~~~ 48 (482)
+|+|+++.+. .|+..-+.. +++.|.+. |++|.++--.
T Consensus 4 mmkilii~~S-~g~T~~la~~i~~~l~~~-g~~v~~~~l~ 41 (199)
T 2zki_A 4 KPNILVLFYG-YGSIVELAKEIGKGAEEA-GAEVKIRRVR 41 (199)
T ss_dssp CCEEEEEECC-SSHHHHHHHHHHHHHHHH-SCEEEEEECC
T ss_pred CcEEEEEEeC-ccHHHHHHHHHHHHHHhC-CCEEEEEehh
Confidence 4678777766 888766554 55666666 9999888543
No 231
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=26.04 E-value=57 Score=30.14 Aligned_cols=38 Identities=13% Similarity=-0.011 Sum_probs=27.8
Q ss_pred CCEEEEEcCCCCC-C---hHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 10 APHIVLLPSPGMG-H---LIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 10 ~~~ili~~~~~~G-H---~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
+++|+++..|..+ | +.....++++|.++ ||+|..+...
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~-g~~v~~i~~~ 54 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDA-GIDAHPFDPA 54 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHT-TCEEEEECTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 4568877765433 2 45678999999887 9999999743
No 232
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=25.84 E-value=48 Score=28.10 Aligned_cols=36 Identities=6% Similarity=0.197 Sum_probs=28.5
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCC
Q 045267 12 HIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSD 49 (482)
Q Consensus 12 ~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~ 49 (482)
||++...|+.|=+ =...+.+.|.++ |++|.++.++.
T Consensus 4 ~IllgvTGs~aa~-k~~~l~~~L~~~-g~~V~vv~T~~ 39 (181)
T 1g63_A 4 KLLICATASINVI-NINHYIVELKQH-FDEVNILFSPS 39 (181)
T ss_dssp CEEEEECSCGGGG-GHHHHHHHHTTT-SSCEEEEECGG
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHHC-CCEEEEEEchh
Confidence 4777766776655 578999999877 99999998774
No 233
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=25.71 E-value=3.5e+02 Score=23.93 Aligned_cols=31 Identities=10% Similarity=0.125 Sum_probs=21.0
Q ss_pred CCccEEEeCCCCcc----HHHHHHHcCCccEEEcc
Q 045267 111 ATVAALVVDLFGTD----AFDVAQEFNISPYIFYP 141 (482)
Q Consensus 111 ~~pD~vi~D~~~~~----~~~~A~~lgIP~v~~~~ 141 (482)
.++|.||....... ....+.+.|||+|.+..
T Consensus 60 ~~vdgiii~~~~~~~~~~~~~~~~~~giPvV~~~~ 94 (297)
T 3rot_A 60 TYPSGIATTIPSDTAFSKSLQRANKLNIPVIAVDT 94 (297)
T ss_dssp TCCSEEEECCCCSSTTHHHHHHHHHHTCCEEEESC
T ss_pred cCCCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEcC
Confidence 38999997664443 23456677999887544
No 234
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=25.62 E-value=50 Score=31.10 Aligned_cols=40 Identities=15% Similarity=0.125 Sum_probs=24.5
Q ss_pred hhhccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 5 LQAQAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 5 ~~~~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
|..|.+|+|+|+. +.|.+= ..|+++|.++.||+|+.++-.
T Consensus 19 ~~~m~~~~vlVtG--atG~iG--~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 19 PGSMKAKKVLILG--VNGFIG--HHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp ----CCCEEEEES--CSSHHH--HHHHHHHHHHSSCEEEEEESC
T ss_pred CcccCCCEEEEEC--CCChHH--HHHHHHHHhCCCCEEEEEeCC
Confidence 4456667777764 444443 467788876548999999754
No 235
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=25.62 E-value=64 Score=28.36 Aligned_cols=33 Identities=6% Similarity=0.095 Sum_probs=26.4
Q ss_pred EEEEcCC-CCCChHHHHHHHHHHHhcCCCEEEEEc
Q 045267 13 IVLLPSP-GMGHLIPLIEFAKRLVHRHHFLVTFFI 46 (482)
Q Consensus 13 ili~~~~-~~GH~~P~l~La~~L~~r~GH~Vt~~~ 46 (482)
|.|.... .-|-..-.+.|++.|+++ |++|.++=
T Consensus 7 i~Itgt~t~vGKT~vt~~L~~~l~~~-G~~V~~~K 40 (228)
T 3of5_A 7 FFIIGTDTEVGKTYISTKLIEVCEHQ-NIKSLCLK 40 (228)
T ss_dssp EEEEESSSSSCHHHHHHHHHHHHHHT-TCCEEEEC
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHC-CCeeEEec
Confidence 4444443 449999999999999988 99999984
No 236
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=25.50 E-value=3.6e+02 Score=23.98 Aligned_cols=31 Identities=6% Similarity=0.071 Sum_probs=19.1
Q ss_pred CCCccEEEeCCCCcc---HHHHHHHcCCccEEEcc
Q 045267 110 KATVAALVVDLFGTD---AFDVAQEFNISPYIFYP 141 (482)
Q Consensus 110 ~~~pD~vi~D~~~~~---~~~~A~~lgIP~v~~~~ 141 (482)
..++|.||....... ....+.+ |+|+|.+..
T Consensus 69 ~~~vdgiI~~~~~~~~~~~~~~l~~-~iPvV~i~~ 102 (303)
T 3kke_A 69 EGRVDGVLLQRREDFDDDMLAAVLE-GVPAVTINS 102 (303)
T ss_dssp SCSSSEEEECCCTTCCHHHHHHHHT-TSCEEEESC
T ss_pred hCCCcEEEEecCCCCcHHHHHHHhC-CCCEEEECC
Confidence 458998887654332 2334455 999887543
No 237
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=25.34 E-value=2.6e+02 Score=24.22 Aligned_cols=102 Identities=15% Similarity=0.142 Sum_probs=62.8
Q ss_pred HHHHHHHHhcCCceEEEEeCCCCCCCCcccccCCCCCCCCCCchhHHhhhcCCCeeeccccchhhhhhcccccccccccC
Q 045267 290 NELALGLEMSEQRFLWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWAPQAQVLSHGSTGGFLCHCG 369 (482)
Q Consensus 290 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ipq~~lL~~~~~~~~I~HGG 369 (482)
.++++.++..+..+++..+... -||+.+.+..+..-+-+ |++ +.=...|
T Consensus 79 ~~~~~~l~~~~~Dlivlagy~~------------------iL~~~~l~~~~~~~iNi-----------HpS--LLP~yrG 127 (215)
T 3da8_A 79 VAITAATAAHEPDLVVSAGFMR------------------ILGPQFLSRFYGRTLNT-----------HPA--LLPAFPG 127 (215)
T ss_dssp HHHHHHHHTTCCSEEEEEECCS------------------CCCHHHHHHHTTTEEEE-----------ESS--CTTSSCS
T ss_pred HHHHHHHHhhCCCEEEEcCchh------------------hCCHHHHhhccCCeEEe-----------Ccc--cccCCCC
Confidence 4577888888888888887642 36777765554332222 444 4444569
Q ss_pred chhHHHHhhcCCcEeeccccc--cchhhHHHHHhhcceeeeeccCCCCccCHHHHHHHHHHH
Q 045267 370 WNSVLESVVNGVPLIAWPLYA--EQKMNAVILTEDVKLALRPKANENGIVGRDEIAKVVKAL 429 (482)
Q Consensus 370 ~gs~~eal~~GvP~v~~P~~~--DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~v 429 (482)
+..+..|+.+|.....+-++. +..+-+..+.+ . -+.+..+ -|.+.|.+.+.++
T Consensus 128 ~~pi~~Ai~~G~~~tGvTvh~v~~~lD~G~Ii~Q-~--~v~I~~~----dt~~~L~~rl~~~ 182 (215)
T 3da8_A 128 THGVADALAYGVKVTGATVHLVDAGTDTGPILAQ-Q--PVPVLDG----DDEETLHERIKVT 182 (215)
T ss_dssp TTHHHHHHHHTCSEEEEEEEECCSSSSCSCEEEE-E--EEECCTT----CCHHHHHHHHHHH
T ss_pred chHHHHHHHcCCCeEEEEEEEEcCCCCCCCEEEE-E--EeecCCC----CCHHHHHHHHHHH
Confidence 999999999999988776532 33333322222 1 1223333 4888888877655
No 238
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=25.32 E-value=48 Score=29.91 Aligned_cols=32 Identities=16% Similarity=0.206 Sum_probs=25.5
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
|+|+|+..|..|. .+|..|.++ ||+|+++...
T Consensus 1 m~i~iiG~G~~G~-----~~a~~l~~~-g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALGQ-----LWLTALCKQ-GHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHHT-TCEEEEECSS
T ss_pred CeEEEECcCHHHH-----HHHHHHHhC-CCCEEEEEcC
Confidence 4789988877774 678889887 9999998644
No 239
>2x5e_A UPF0271 protein PA4511; unknown function; HET: CIT; 2.30A {Pseudomonas aeruginosa} PDB: 2xu2_A*
Probab=25.02 E-value=54 Score=29.29 Aligned_cols=110 Identities=13% Similarity=0.006 Sum_probs=61.7
Q ss_pred EEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEecCCCCCCCcch-hhHHHHH---
Q 045267 15 LLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLPVSLNDVAEDA-RAETVIS--- 90 (482)
Q Consensus 15 i~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~--- 90 (482)
|.+.+..|+-.-|..-.+.- .+ |.|.+-.++.+.+...+++ ..+..+.+++.... -....+.
T Consensus 39 IACGfHAGDp~~M~~Tv~lA-~~--~gV~IGAHPgypDl~GFGR-----------R~m~~s~~el~~~v~YQiGAL~a~a 104 (252)
T 2x5e_A 39 LACGFHAGDPLTMRRAVELA-VR--HGVSIGAHPAYPDLSGFGR-----------RSLACSAEEVHAMVLYQIGALDAFC 104 (252)
T ss_dssp EECSSSSCCHHHHHHHHHHH-HH--TTCEEEEECCCSCTTTTTC-----------SCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred hhccccCCCHHHHHHHHHHH-HH--cCCeeecCCCCCcccCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 56677779988888877744 33 5688889888877432211 11121111111000 0001111
Q ss_pred ----------------HHHHhhhHHHHHHHHHHhhCCCccEEEeCCC---CccHHHHHHHcCCccEE
Q 045267 91 ----------------LTVLRSLPCLRQELTSLVAKATVAALVVDLF---GTDAFDVAQEFNISPYI 138 (482)
Q Consensus 91 ----------------~~~~~~~~~l~~~l~~~~~~~~pD~vi~D~~---~~~~~~~A~~lgIP~v~ 138 (482)
.......+.+.+.+.+.+....|+++|.-.. ......+|++.|+|++.
T Consensus 105 ~~~G~~l~hVKPHGALYN~~~~d~~~A~av~~av~~~d~~L~l~~l~~~~gs~~~~~A~~~Gl~~~~ 171 (252)
T 2x5e_A 105 RSLGTQVAYVKPHGALYNDLVGDDELLRAVLDACAAYRKGLPLMVLALADNGRELELADEADVPLLF 171 (252)
T ss_dssp HHTTCCCCEECCCHHHHHHHTTCHHHHHHHHHHHHHHCTTCCEEEECCSCCHHHHHHHHHHTCCEEE
T ss_pred HHcCCEeEEeccCHHHHHHHhhCHHHHHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHcCCcEEE
Confidence 1112234556666666666668998887654 33345899999999775
No 240
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=24.94 E-value=56 Score=30.38 Aligned_cols=39 Identities=15% Similarity=0.137 Sum_probs=23.9
Q ss_pred hhhccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 5 LQAQAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 5 ~~~~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
+..|++|+|+++. +.|-+- ..|++.|.++ ||+|+.+...
T Consensus 22 ~~~~~~~~vlVtG--atG~iG--~~l~~~L~~~-g~~V~~~~r~ 60 (343)
T 2b69_A 22 HMEKDRKRILITG--GAGFVG--SHLTDKLMMD-GHEVTVVDNF 60 (343)
T ss_dssp -----CCEEEEET--TTSHHH--HHHHHHHHHT-TCEEEEEECC
T ss_pred ccccCCCEEEEEc--CccHHH--HHHHHHHHHC-CCEEEEEeCC
Confidence 3456667776664 444433 4678889888 9999998743
No 241
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=24.87 E-value=3.3e+02 Score=24.27 Aligned_cols=32 Identities=16% Similarity=0.144 Sum_probs=21.4
Q ss_pred CCCccEEEeCCCCcc--HHHHHHHcCCccEEEcc
Q 045267 110 KATVAALVVDLFGTD--AFDVAQEFNISPYIFYP 141 (482)
Q Consensus 110 ~~~pD~vi~D~~~~~--~~~~A~~lgIP~v~~~~ 141 (482)
..++|.||....... ....+...|||+|.+..
T Consensus 81 ~~~vdgiIi~~~~~~~~~~~~l~~~~iPvV~i~~ 114 (305)
T 3huu_A 81 SKSVDGFILLYSLKDDPIEHLLNEFKVPYLIVGK 114 (305)
T ss_dssp TTCCSEEEESSCBTTCHHHHHHHHTTCCEEEESC
T ss_pred hCCCCEEEEeCCcCCcHHHHHHHHcCCCEEEECC
Confidence 458999887653322 33456678999887654
No 242
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=24.85 E-value=45 Score=31.74 Aligned_cols=35 Identities=14% Similarity=0.128 Sum_probs=26.2
Q ss_pred hccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcC
Q 045267 7 AQAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIP 47 (482)
Q Consensus 7 ~~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~ 47 (482)
+|++|+|.|+..|..| ..+|+.|.++ ||+|+++..
T Consensus 19 Mm~~mkIgiIGlG~mG-----~~~A~~L~~~-G~~V~v~dr 53 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMG-----ADMVRRLRKG-GHECVVYDL 53 (358)
T ss_dssp ---CCEEEEECCSHHH-----HHHHHHHHHT-TCEEEEECS
T ss_pred hhcCCEEEEECchHHH-----HHHHHHHHhC-CCEEEEEeC
Confidence 3456899999887776 3678899887 999998853
No 243
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=24.80 E-value=99 Score=26.36 Aligned_cols=42 Identities=2% Similarity=-0.126 Sum_probs=27.2
Q ss_pred hhhccCCEEEEEcCCCCCCh----HHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 5 LQAQAAPHIVLLPSPGMGHL----IPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 5 ~~~~~~~~ili~~~~~~GH~----~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
|....+|+|.+++... +.- .-...|++.|+++ ||.|.+-...
T Consensus 8 ~~~~~~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~-g~~lv~GGG~ 53 (189)
T 3sbx_A 8 SDEPGRWTVAVYCAAA-PTHPELLELAGAVGAAIAAR-GWTLVWGGGH 53 (189)
T ss_dssp -----CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHT-TCEEEECCBC
T ss_pred CCCCCCeEEEEEEeCC-CCChHHHHHHHHHHHHHHHC-CCEEEECCCc
Confidence 3444567899988665 433 4467888899887 9998887543
No 244
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=24.77 E-value=42 Score=31.37 Aligned_cols=39 Identities=8% Similarity=0.033 Sum_probs=24.1
Q ss_pred hhccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCC
Q 045267 6 QAQAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSD 49 (482)
Q Consensus 6 ~~~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~ 49 (482)
..|.+++|+++. +.|.+= ..|+++|.++ ||+|+.++-..
T Consensus 6 ~~M~~~~IlVtG--atG~iG--~~l~~~L~~~-g~~V~~l~R~~ 44 (346)
T 3i6i_A 6 VPSPKGRVLIAG--ATGFIG--QFVATASLDA-HRPTYILARPG 44 (346)
T ss_dssp -----CCEEEEC--TTSHHH--HHHHHHHHHT-TCCEEEEECSS
T ss_pred CCCCCCeEEEEC--CCcHHH--HHHHHHHHHC-CCCEEEEECCC
Confidence 346666777664 445443 4578889888 99999998653
No 245
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=24.40 E-value=46 Score=31.22 Aligned_cols=40 Identities=10% Similarity=0.077 Sum_probs=27.2
Q ss_pred ccCCEEEEEcCCCCCC----hHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 8 QAAPHIVLLPSPGMGH----LIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 8 ~~~~~ili~~~~~~GH----~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
|.|+||+++..|..+- +.....++++|.+. ||+|..+...
T Consensus 1 m~~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~-g~~v~~i~~~ 44 (343)
T 1e4e_A 1 MNRIKVAILFGGCSEEHDVSVKSAIEIAANINKE-KYEPLYIGIT 44 (343)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTT-TEEEEEEEEC
T ss_pred CCCcEEEEEeCCCCCCcchhHHHHHHHHHHhhhc-CCEEEEEEEc
Confidence 4467888887553322 22567789999776 9999988644
No 246
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=24.29 E-value=1.2e+02 Score=26.45 Aligned_cols=44 Identities=16% Similarity=0.027 Sum_probs=29.8
Q ss_pred ccccccccCCCCCcEEEEeccCCCCCCHHHHHHHHHHHHhcCCceE
Q 045267 259 EGCLKWLDDQPLGSVLFVSFGSGGTLSCEQLNELALGLEMSEQRFL 304 (482)
Q Consensus 259 ~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i 304 (482)
+.+.+|+... +.+++|..++...........+.++|+.++..++
T Consensus 22 ~~l~~~~~~~--~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~ 65 (229)
T 1fy2_A 22 PLIANQLNGR--RSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVT 65 (229)
T ss_dssp HHHHHHHTTC--CEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEE
T ss_pred HHHHHHhcCC--CeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEE
Confidence 4456666532 4599999987544444557778999999886543
No 247
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=24.22 E-value=71 Score=29.46 Aligned_cols=30 Identities=23% Similarity=0.400 Sum_probs=25.9
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEc
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFI 46 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~ 46 (482)
++|.|+..|..|. ++|+.|.++ ||+|+++-
T Consensus 4 ~kIgfIGlG~MG~-----~mA~~L~~~-G~~v~v~d 33 (300)
T 3obb_A 4 KQIAFIGLGHMGA-----PMATNLLKA-GYLLNVFD 33 (300)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHT-TCEEEEEC
T ss_pred CEEEEeeehHHHH-----HHHHHHHhC-CCeEEEEc
Confidence 4699999999995 679999888 99999883
No 248
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=24.10 E-value=23 Score=33.67 Aligned_cols=30 Identities=20% Similarity=0.184 Sum_probs=25.1
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcC
Q 045267 12 HIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIP 47 (482)
Q Consensus 12 ~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~ 47 (482)
+|.|+..|..|. .+|..|.++ ||+|+++..
T Consensus 17 kI~iIG~G~mG~-----~la~~L~~~-G~~V~~~~r 46 (366)
T 1evy_A 17 KAVVFGSGAFGT-----ALAMVLSKK-CREVCVWHM 46 (366)
T ss_dssp EEEEECCSHHHH-----HHHHHHTTT-EEEEEEECS
T ss_pred eEEEECCCHHHH-----HHHHHHHhC-CCEEEEEEC
Confidence 899999888874 578889877 999999864
No 249
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=24.07 E-value=55 Score=29.95 Aligned_cols=32 Identities=22% Similarity=0.344 Sum_probs=26.3
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcC
Q 045267 10 APHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIP 47 (482)
Q Consensus 10 ~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~ 47 (482)
+|+|.|+..|..|. .+|+.|.++ ||+|+++..
T Consensus 3 m~~I~iiG~G~mG~-----~~a~~l~~~-G~~V~~~d~ 34 (302)
T 2h78_A 3 MKQIAFIGLGHMGA-----PMATNLLKA-GYLLNVFDL 34 (302)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHT-TCEEEEECS
T ss_pred CCEEEEEeecHHHH-----HHHHHHHhC-CCeEEEEcC
Confidence 46899999888885 678889887 999998843
No 250
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=24.05 E-value=49 Score=28.78 Aligned_cols=38 Identities=5% Similarity=0.039 Sum_probs=23.9
Q ss_pred hhccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 6 QAQAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 6 ~~~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
..++.|+|+++. +.|.+= ..|+++|.++ ||+|+.++-.
T Consensus 17 ~~l~~~~ilVtG--atG~iG--~~l~~~L~~~-G~~V~~~~R~ 54 (236)
T 3e8x_A 17 LYFQGMRVLVVG--ANGKVA--RYLLSELKNK-GHEPVAMVRN 54 (236)
T ss_dssp ----CCEEEEET--TTSHHH--HHHHHHHHHT-TCEEEEEESS
T ss_pred cCcCCCeEEEEC--CCChHH--HHHHHHHHhC-CCeEEEEECC
Confidence 445567776664 344332 4678899888 9999999743
No 251
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=24.02 E-value=68 Score=30.69 Aligned_cols=34 Identities=6% Similarity=-0.123 Sum_probs=26.6
Q ss_pred ccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcC
Q 045267 8 QAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIP 47 (482)
Q Consensus 8 ~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~ 47 (482)
|++++|+++..+.. .+.+++++.+. |++|.++..
T Consensus 5 ~~~~~ilI~g~g~~-----~~~~~~a~~~~-G~~~v~v~~ 38 (403)
T 4dim_A 5 YDNKRLLILGAGRG-----QLGLYKAAKEL-GIHTIAGTM 38 (403)
T ss_dssp -CCCEEEEECCCGG-----GHHHHHHHHHH-TCEEEEEEC
T ss_pred cCCCEEEEECCcHh-----HHHHHHHHHHC-CCEEEEEcC
Confidence 56778999987754 36688999887 999999964
No 252
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=24.01 E-value=3.1e+02 Score=24.20 Aligned_cols=32 Identities=6% Similarity=0.040 Sum_probs=20.2
Q ss_pred CCCccEEEeCCCCc--cHHHHHHHcCCccEEEcc
Q 045267 110 KATVAALVVDLFGT--DAFDVAQEFNISPYIFYP 141 (482)
Q Consensus 110 ~~~pD~vi~D~~~~--~~~~~A~~lgIP~v~~~~ 141 (482)
+.++|.||.-.... .....+.+.|||+|.+..
T Consensus 64 ~~~vdgiIi~~~~~~~~~~~~l~~~~iPvV~i~~ 97 (288)
T 3gv0_A 64 TGSADGVIISKIEPNDPRVRFMTERNMPFVTHGR 97 (288)
T ss_dssp HTCCSEEEEESCCTTCHHHHHHHHTTCCEEEESC
T ss_pred cCCccEEEEecCCCCcHHHHHHhhCCCCEEEECC
Confidence 34899888644332 234556678999887543
No 253
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=23.71 E-value=44 Score=30.40 Aligned_cols=31 Identities=10% Similarity=0.220 Sum_probs=24.3
Q ss_pred CCEEEEEcC-CCCCChHHHHHHHHHHHhcCCCEEEEEc
Q 045267 10 APHIVLLPS-PGMGHLIPLIEFAKRLVHRHHFLVTFFI 46 (482)
Q Consensus 10 ~~~ili~~~-~~~GH~~P~l~La~~L~~r~GH~Vt~~~ 46 (482)
+|+|.|+.. |..| ..+|+.|.++ ||+|+++.
T Consensus 11 mm~I~iIG~tG~mG-----~~la~~l~~~-g~~V~~~~ 42 (286)
T 3c24_A 11 PKTVAILGAGGKMG-----ARITRKIHDS-AHHLAAIE 42 (286)
T ss_dssp CCEEEEETTTSHHH-----HHHHHHHHHS-SSEEEEEC
T ss_pred CCEEEEECCCCHHH-----HHHHHHHHhC-CCEEEEEE
Confidence 368999987 7766 4578889887 99999774
No 254
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=23.71 E-value=40 Score=30.97 Aligned_cols=33 Identities=15% Similarity=0.143 Sum_probs=26.5
Q ss_pred cCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcC
Q 045267 9 AAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIP 47 (482)
Q Consensus 9 ~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~ 47 (482)
+.++|.|+..|..|+ .+|..|+++ ||+|+++..
T Consensus 14 ~~~~I~VIG~G~mG~-----~iA~~la~~-G~~V~~~d~ 46 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGA-----GIAQVAAAT-GHTVVLVDQ 46 (302)
T ss_dssp CCCEEEEECCSHHHH-----HHHHHHHHT-TCEEEEECS
T ss_pred cCCEEEEECCCHHHH-----HHHHHHHhC-CCeEEEEEC
Confidence 346799999888886 478889887 999998853
No 255
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=23.70 E-value=62 Score=30.24 Aligned_cols=38 Identities=8% Similarity=-0.151 Sum_probs=25.9
Q ss_pred hhccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 6 QAQAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 6 ~~~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
..|+.|+|++. |+.|.+= ..|++.|.++ ||+|+.+.-.
T Consensus 5 ~~~~~~~vlVt--GatG~iG--~~l~~~L~~~-g~~V~~~~r~ 42 (357)
T 1rkx_A 5 SFWQGKRVFVT--GHTGFKG--GWLSLWLQTM-GATVKGYSLT 42 (357)
T ss_dssp HHHTTCEEEEE--TTTSHHH--HHHHHHHHHT-TCEEEEEESS
T ss_pred hhhCCCEEEEE--CCCchHH--HHHHHHHHhC-CCeEEEEeCC
Confidence 34556777665 4455443 4578889888 9999998743
No 256
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=23.61 E-value=96 Score=26.45 Aligned_cols=38 Identities=11% Similarity=-0.012 Sum_probs=25.4
Q ss_pred cCCEEEEEcCCCCCChHHHHH-HHHHHHhcCCCEEEEEcC
Q 045267 9 AAPHIVLLPSPGMGHLIPLIE-FAKRLVHRHHFLVTFFIP 47 (482)
Q Consensus 9 ~~~~ili~~~~~~GH~~P~l~-La~~L~~r~GH~Vt~~~~ 47 (482)
++|+|+++-+...|+..-+.. +++.|.+. |++|.++--
T Consensus 5 ~mmkilii~~S~~g~T~~la~~i~~~l~~~-g~~v~~~~l 43 (211)
T 1ydg_A 5 APVKLAIVFYSSTGTGYAMAQEAAEAGRAA-GAEVRLLKV 43 (211)
T ss_dssp CCCEEEEEECCSSSHHHHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHhcC-CCEEEEEec
Confidence 356777766655787766554 45666655 999988853
No 257
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=23.54 E-value=2e+02 Score=21.87 Aligned_cols=49 Identities=4% Similarity=-0.040 Sum_probs=30.9
Q ss_pred cCCcEeeccccccchhhHHHHHhhcceeeeeccCCCCccCHHHHHHHHHHHhcC
Q 045267 379 NGVPLIAWPLYAEQKMNAVILTEDVKLALRPKANENGIVGRDEIAKVVKALMEG 432 (482)
Q Consensus 379 ~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~vl~~ 432 (482)
..+|+|++--..|.......+.. .|+--.+.+. ++.+.|..+|+.++..
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~~-~ga~~~l~KP----~~~~~L~~~i~~~~~~ 119 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAIND-AGIHQFLTKP----WHPEQLLSSARNAARM 119 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHHH-TTCCEEEESS----CCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHh-hchhhhccCC----CCHHHHHHHHHHHHHH
Confidence 45777777554454444444444 3554445443 7999999999998853
No 258
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=23.40 E-value=92 Score=24.86 Aligned_cols=35 Identities=11% Similarity=-0.003 Sum_probs=24.9
Q ss_pred EEEEcCCCCCChHH--HHHHHHHHHhcCCCEEEEEcCC
Q 045267 13 IVLLPSPGMGHLIP--LIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 13 ili~~~~~~GH~~P--~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
++++..+.+|+... .+.+|.++... ||+|+++-..
T Consensus 9 ~ivv~~~P~g~~~~~~al~~a~a~~a~-~~~v~Vff~~ 45 (136)
T 2hy5_B 9 MYLNRKAPYGTIYAWEALEVVLIGAAF-DQDVCVLFLD 45 (136)
T ss_dssp EEEECSCTTTSSHHHHHHHHHHHHGGG-CCEEEEEECG
T ss_pred EEEEeCCCCCcHHHHHHHHHHHHHHhC-CCCEEEEEEh
Confidence 44445555676544 57779999887 9999999654
No 259
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=23.07 E-value=77 Score=28.83 Aligned_cols=31 Identities=23% Similarity=0.213 Sum_probs=24.9
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEc
Q 045267 10 APHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFI 46 (482)
Q Consensus 10 ~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~ 46 (482)
+|+|.|+..|..|. .+++.|.+. ||+|+++.
T Consensus 4 ~~~i~iiG~G~~G~-----~~a~~l~~~-g~~V~~~~ 34 (301)
T 3cky_A 4 SIKIGFIGLGAMGK-----PMAINLLKE-GVTVYAFD 34 (301)
T ss_dssp CCEEEEECCCTTHH-----HHHHHHHHT-TCEEEEEC
T ss_pred CCEEEEECccHHHH-----HHHHHHHHC-CCeEEEEe
Confidence 57899998888775 457888777 99998774
No 260
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=22.86 E-value=1.1e+02 Score=27.90 Aligned_cols=38 Identities=13% Similarity=0.044 Sum_probs=22.7
Q ss_pred ccCCEEEEE-cCCCCCChHHHH--HHHHHHHhcCCCEEEEEc
Q 045267 8 QAAPHIVLL-PSPGMGHLIPLI--EFAKRLVHRHHFLVTFFI 46 (482)
Q Consensus 8 ~~~~~ili~-~~~~~GH~~P~l--~La~~L~~r~GH~Vt~~~ 46 (482)
|..|||+|+ ..|-...++-.+ ...+.|.++ ||+|++.-
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~-G~eV~v~D 60 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQA-GHEVQVSD 60 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHT-TCEEEEEE
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHC-CCeEEEEE
Confidence 445555554 445544454433 456778777 99999983
No 261
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=22.78 E-value=21 Score=35.48 Aligned_cols=33 Identities=24% Similarity=0.277 Sum_probs=27.2
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 10 APHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 10 ~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
.|||+++..|-.|. .||+.|.++ ||+|+++=..
T Consensus 3 ~M~iiI~G~G~vG~-----~la~~L~~~-~~~v~vId~d 35 (461)
T 4g65_A 3 AMKIIILGAGQVGG-----TLAENLVGE-NNDITIVDKD 35 (461)
T ss_dssp CEEEEEECCSHHHH-----HHHHHTCST-TEEEEEEESC
T ss_pred cCEEEEECCCHHHH-----HHHHHHHHC-CCCEEEEECC
Confidence 57899999887774 689999877 9999999543
No 262
>2zr9_A Protein RECA, recombinase A; recombination, RECA mutants, DNA-repair, ATP-binding, DNA DA recombination, DNA repair, DNA-binding; HET: DTP; 2.50A {Mycobacterium smegmatis str} PDB: 2zr0_A* 2zra_A* 2zrb_A 2zrm_A* 1ubc_A* 1ubf_A* 1ubg_A* 1ube_A* 2g88_A* 2odw_A* 2oe2_A 2oep_A* 2oes_A 2ofo_A 2zr7_A 2odn_A* 2zrn_A 2zro_A* 2zrp_A* 2zre_A* ...
Probab=22.68 E-value=1.9e+02 Score=27.15 Aligned_cols=41 Identities=7% Similarity=-0.014 Sum_probs=34.3
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCC
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPP 52 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~ 52 (482)
..++++..++.|-..=++.++..+.++ |..|.|++.+...+
T Consensus 62 ~iv~I~G~pGsGKTtLal~la~~~~~~-g~~vlyi~~E~~~~ 102 (349)
T 2zr9_A 62 RVIEIYGPESSGKTTVALHAVANAQAA-GGIAAFIDAEHALD 102 (349)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHHHHT-TCCEEEEESSCCCC
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHhC-CCeEEEEECCCCcC
Confidence 457888888999999999999999877 99999999875433
No 263
>3cmw_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 2.80A {Escherichia coli} PDB: 3cmt_A* 3cmx_A* 3cmv_A*
Probab=22.66 E-value=2e+02 Score=33.62 Aligned_cols=103 Identities=9% Similarity=-0.005 Sum_probs=0.0
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEec-CCCCCCCcchhhHHHHHH
Q 045267 13 IVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLP-VSLNDVAEDARAETVISL 91 (482)
Q Consensus 13 ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~ 91 (482)
++|...|+.|-..=.+.++...+++ |..|.|++.+...+......+ +++...+- ...+
T Consensus 386 ilI~G~pGsGKTtLaLq~a~~~~~~-G~~vlyis~E~s~~~~~a~~l------Gvd~~~L~i~~~~-------------- 444 (1706)
T 3cmw_A 386 VEIYGPESSGKTTLTLQVIAAAQRE-GKTCAFIDAEHALDPIYARKL------GVDIDNLLCSQPD-------------- 444 (1706)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHT-TCCEEEECTTSCCCHHHHHHT------TCCGGGCEEECCS--------------
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHh-CCCeEEEEccCchHHHHHHHc------CCCHHHeEEcCCC--------------
Q ss_pred HHHhhhHHHHHHHHHHhhCCCccEEEeCCCCccH----------------------------HHHHHHcCCccEEEc
Q 045267 92 TVLRSLPCLRQELTSLVAKATVAALVVDLFGTDA----------------------------FDVAQEFNISPYIFY 140 (482)
Q Consensus 92 ~~~~~~~~l~~~l~~~~~~~~pD~vi~D~~~~~~----------------------------~~~A~~lgIP~v~~~ 140 (482)
..+.+...++.++++.++|+||.|....-. ...|+++|+|++.++
T Consensus 445 ----~~e~~l~~l~~lv~~~~~~lVVIDSL~al~~~~e~e~~~g~~~~~~q~r~~s~~Lr~L~~~ak~~~v~VI~in 517 (1706)
T 3cmw_A 445 ----TGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFIN 517 (1706)
T ss_dssp ----SHHHHHHHHHHHHHHTCCSEEEESCSTTCCCHHHHHSCTTCCCTTHHHHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred ----CHHHHHHHHHHHHHhcCCCEEEECCHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHcCCEEEEEe
No 264
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=22.60 E-value=43 Score=31.74 Aligned_cols=40 Identities=5% Similarity=0.064 Sum_probs=26.9
Q ss_pred ccCCEEEEEcCCCCCCh----HHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 8 QAAPHIVLLPSPGMGHL----IPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 8 ~~~~~ili~~~~~~GH~----~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
|.||+|+++..|...-- .-...++++|.++ ||+|..+...
T Consensus 1 m~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~-g~~v~~i~~~ 44 (364)
T 2i87_A 1 MTKENICIVFGGKSAEHEVSILTAQNVLNAIDKD-KYHVDIIYIT 44 (364)
T ss_dssp --CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTT-TEEEEEEEEC
T ss_pred CCCcEEEEEECCCCccchhHHHHHHHHHHHHhhc-CCEEEEEEEc
Confidence 44667888876543322 3447789999776 9999988644
No 265
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=22.41 E-value=26 Score=30.49 Aligned_cols=32 Identities=9% Similarity=0.246 Sum_probs=24.1
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
|+|+++..|..| ..+|+.|.++ ||+|+++...
T Consensus 1 M~iiIiG~G~~G-----~~la~~L~~~-g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGGETTA-----YYLARSMLSR-KYGVVIINKD 32 (218)
T ss_dssp CCEEEECCHHHH-----HHHHHHHHHT-TCCEEEEESC
T ss_pred CEEEEECCCHHH-----HHHHHHHHhC-CCeEEEEECC
Confidence 468888754444 4789999887 9999999743
No 266
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=22.39 E-value=65 Score=29.50 Aligned_cols=33 Identities=15% Similarity=0.208 Sum_probs=22.7
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCCC
Q 045267 12 HIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPSD 49 (482)
Q Consensus 12 ~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~~ 49 (482)
+|+++ |+.|.+= ..|+++|.++ ||+|+.++-..
T Consensus 13 ~ilVt--GatG~iG--~~l~~~L~~~-g~~V~~l~R~~ 45 (318)
T 2r6j_A 13 KILIF--GGTGYIG--NHMVKGSLKL-GHPTYVFTRPN 45 (318)
T ss_dssp CEEEE--TTTSTTH--HHHHHHHHHT-TCCEEEEECTT
T ss_pred eEEEE--CCCchHH--HHHHHHHHHC-CCcEEEEECCC
Confidence 46555 4445443 4678889888 99999987543
No 267
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=22.37 E-value=1.4e+02 Score=27.35 Aligned_cols=103 Identities=14% Similarity=0.104 Sum_probs=63.3
Q ss_pred HHHHHHHHhcCCceEEEEeCCCCCCCCcccccCCCCCCCCCCchhHHhhhcCCCeeeccccchhhhhhcccccccccccC
Q 045267 290 NELALGLEMSEQRFLWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWAPQAQVLSHGSTGGFLCHCG 369 (482)
Q Consensus 290 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ipq~~lL~~~~~~~~I~HGG 369 (482)
.++++.++..+..+++..+.. .-||+.+.+..+..-+-+ |++ +.=...|
T Consensus 156 ~~~~~~l~~~~~Dlivlagy~------------------~il~~~~l~~~~~~~iNi-----------HpS--lLP~~rG 204 (288)
T 3obi_A 156 AAITALIAQTHTDLVVLARYM------------------QILSDEMSARLAGRCINI-----------HHS--FLPGFKG 204 (288)
T ss_dssp HHHHHHHHHHTCCEEEESSCC------------------SCCCHHHHHHTTTSEEEE-----------EEE--CSSCCCS
T ss_pred HHHHHHHHhcCCCEEEhhhhh------------------hhCCHHHHhhhcCCeEEe-----------Ccc--cccCCCC
Confidence 457888888888888777653 236777765554332222 444 4444579
Q ss_pred chhHHHHhhcCCcEeeccccc--cchhhHHHHHhhcceeeeeccCCCCccCHHHHHHHHHHHh
Q 045267 370 WNSVLESVVNGVPLIAWPLYA--EQKMNAVILTEDVKLALRPKANENGIVGRDEIAKVVKALM 430 (482)
Q Consensus 370 ~gs~~eal~~GvP~v~~P~~~--DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~vl 430 (482)
.+.+..|+.+|+....+-.+. +..+-+..+.+ . -+.+... -|.+.|.+.+.++-
T Consensus 205 ~~p~~~A~~~G~~~~G~Tvh~v~~~~D~GpIi~Q-~--~v~i~~~----dt~~~L~~r~~~~e 260 (288)
T 3obi_A 205 AKPYHQAFDRGVKLIGATAHYVTSALDEGPIIDQ-D--VERISHR----DTPADLVRKGRDIE 260 (288)
T ss_dssp SCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEE-E--EEECCTT----CCHHHHHHHHHHHH
T ss_pred chHHHHHHHcCCCEEEEEEEEECCCCcCCCeEEE-E--EEecCCC----CCHHHHHHHHHHHH
Confidence 999999999999998877532 22222222222 1 1223333 48888888887664
No 268
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=22.26 E-value=54 Score=32.41 Aligned_cols=31 Identities=6% Similarity=0.078 Sum_probs=23.6
Q ss_pred HHHhhCCCccEEEeCCCCccHHHHHHHcCCccEE
Q 045267 105 TSLVAKATVAALVVDLFGTDAFDVAQEFNISPYI 138 (482)
Q Consensus 105 ~~~~~~~~pD~vi~D~~~~~~~~~A~~lgIP~v~ 138 (482)
+++++..+||++|.+.. ...+|+++|||++.
T Consensus 368 e~~i~~~~pDllig~~~---~~~~a~k~gip~~~ 398 (458)
T 3pdi_B 368 EHAARAGQAQLVIGNSH---ALASARRLGVPLLR 398 (458)
T ss_dssp HHHHHHHTCSEEEECTT---HHHHHHHTTCCEEE
T ss_pred HHHHHhcCCCEEEEChh---HHHHHHHcCCCEEE
Confidence 34444559999999864 56799999999775
No 269
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=22.24 E-value=64 Score=27.75 Aligned_cols=32 Identities=16% Similarity=0.220 Sum_probs=25.1
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcC
Q 045267 10 APHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIP 47 (482)
Q Consensus 10 ~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~ 47 (482)
.++|.|+..|..| ..+|+.|.++ ||+|+++..
T Consensus 19 ~~~I~iiG~G~mG-----~~la~~l~~~-g~~V~~~~~ 50 (209)
T 2raf_A 19 GMEITIFGKGNMG-----QAIGHNFEIA-GHEVTYYGS 50 (209)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHT-TCEEEEECT
T ss_pred CCEEEEECCCHHH-----HHHHHHHHHC-CCEEEEEcC
Confidence 4689999877777 5678889887 999998854
No 270
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=22.21 E-value=1.3e+02 Score=27.54 Aligned_cols=103 Identities=13% Similarity=0.099 Sum_probs=62.7
Q ss_pred HHHHHHHHhcCCceEEEEeCCCCCCCCcccccCCCCCCCCCCchhHHhhhcCCCeeeccccchhhhhhcccccccccccC
Q 045267 290 NELALGLEMSEQRFLWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWAPQAQVLSHGSTGGFLCHCG 369 (482)
Q Consensus 290 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ipq~~lL~~~~~~~~I~HGG 369 (482)
.++++.++..+..+++..+.. .-||+.+.+..+..-+=+ |++ +.=...|
T Consensus 155 ~~~~~~l~~~~~Dlivlagym------------------~il~~~~l~~~~~~~iNi-----------HpS--lLP~~rG 203 (287)
T 3nrb_A 155 SQIKNIVTQSQADLIVLARYM------------------QILSDDLSAFLSGRCINI-----------HHS--FLPGFKG 203 (287)
T ss_dssp HHHHHHHHHHTCSEEEESSCC------------------SCCCHHHHHHHTTSEEEE-----------ESS--CTTTTCS
T ss_pred HHHHHHHHHhCCCEEEhhhhh------------------hhcCHHHHhhccCCeEEE-----------Ccc--cccCCCC
Confidence 457788888888888777653 236777766554332222 444 4444569
Q ss_pred chhHHHHhhcCCcEeeccccc--cchhhHHHHHhhcceeeeeccCCCCccCHHHHHHHHHHHh
Q 045267 370 WNSVLESVVNGVPLIAWPLYA--EQKMNAVILTEDVKLALRPKANENGIVGRDEIAKVVKALM 430 (482)
Q Consensus 370 ~gs~~eal~~GvP~v~~P~~~--DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~vl 430 (482)
.+.+..|+.+|+....+-.+. +..+-+..+.+ --+.+... -|.+.|.+.+.++-
T Consensus 204 ~~p~~~Ai~~G~k~tG~Tvh~v~~~lD~GpIi~Q---~~v~i~~~----dt~~~L~~r~~~~e 259 (287)
T 3nrb_A 204 AKPYHQAHTRGVKLIGATAHFVTADLDEGPIIAQ---DVEHVSHR----DSAEDLVRKGRDIE 259 (287)
T ss_dssp SCHHHHHHHHTCSEEEEEEEECCSSSSCCCEEEE---EEEECCTT----CCHHHHHHHHHHHH
T ss_pred chHHHHHHHcCCCeEEEEEEEECCCCcCCCEEEE---EEEecCCC----CCHHHHHHHHHHHH
Confidence 999999999999998877532 22222222222 11223333 48888888887663
No 271
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=22.19 E-value=70 Score=27.17 Aligned_cols=33 Identities=15% Similarity=0.110 Sum_probs=23.0
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
|+|+++. +.|.+= ..|+++|.++ ||+|+.++-.
T Consensus 1 MkvlVtG--atG~iG--~~l~~~L~~~-g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIG--ATGRAG--SRILEEAKNR-GHEVTAIVRN 33 (221)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHHT-TCEEEEEESC
T ss_pred CeEEEEc--CCchhH--HHHHHHHHhC-CCEEEEEEcC
Confidence 4566553 444443 4788999888 9999999754
No 272
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=22.10 E-value=71 Score=27.31 Aligned_cols=33 Identities=15% Similarity=0.079 Sum_probs=22.9
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
|+|+++ |+.|.+= ..|+++|.++ ||+|+.++-.
T Consensus 1 MkilVt--GatG~iG--~~l~~~L~~~-g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVL--GATGRAG--SAIVAEARRR-GHEVLAVVRD 33 (224)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHT-TCEEEEEESC
T ss_pred CEEEEE--cCCCHHH--HHHHHHHHHC-CCEEEEEEec
Confidence 455555 3444443 5788999888 9999999743
No 273
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=22.04 E-value=1.8e+02 Score=25.20 Aligned_cols=102 Identities=16% Similarity=0.148 Sum_probs=61.5
Q ss_pred HHHHHHHHhcCCceEEEEeCCCCCCCCcccccCCCCCCCCCCchhHHhhhcCCCeeeccccchhhhhhcccccccccccC
Q 045267 290 NELALGLEMSEQRFLWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWAPQAQVLSHGSTGGFLCHCG 369 (482)
Q Consensus 290 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ipq~~lL~~~~~~~~I~HGG 369 (482)
.++++.++.....+++..+... -||+.+.+..+..-+-+ |++ +.=...|
T Consensus 73 ~~~~~~l~~~~~Dliv~agy~~------------------il~~~~l~~~~~~~iNi-----------HpS--LLP~yrG 121 (215)
T 3tqr_A 73 STLQKTIDHYDPKLIVLAGFMR------------------KLGKAFVSHYSGRMINI-----------HPS--LLPKYTG 121 (215)
T ss_dssp HHHHHHHHTTCCSEEEESSCCS------------------CCCHHHHHHTTTSEEEE-----------ESS--STTTTCS
T ss_pred HHHHHHHHhcCCCEEEEccchh------------------hCCHHHHhhccCCeEEe-----------Ccc--cCCCCCC
Confidence 4577888888888887776532 36777665543322212 444 4444568
Q ss_pred chhHHHHhhcCCcEeeccccc--cchhhHHHHHhhcceeeeeccCCCCccCHHHHHHHHHHH
Q 045267 370 WNSVLESVVNGVPLIAWPLYA--EQKMNAVILTEDVKLALRPKANENGIVGRDEIAKVVKAL 429 (482)
Q Consensus 370 ~gs~~eal~~GvP~v~~P~~~--DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~v 429 (482)
...+..|+.+|.....+-++. +..+-+..+.+ . -+.+..+ -|.+.|.+.+.++
T Consensus 122 ~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q-~--~v~I~~~----dt~~~L~~rl~~~ 176 (215)
T 3tqr_A 122 LNTHERALAAGETEHGVSVHYVTEDLDAGPLICQ-A--RLSITPQ----DTPETLKTRVHAL 176 (215)
T ss_dssp SCHHHHHHHTTCSEEEEEEEECC-CTTCSCEEEE-E--EEECCTT----CCHHHHHHHHHHH
T ss_pred hhHHHHHHHcCCCeEEEEEEEEcCCCCCCCEEEE-E--EEecCCC----CCHHHHHHHHHHH
Confidence 999999999999988776532 33333333322 1 1223333 4788888877655
No 274
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=22.02 E-value=3e+02 Score=23.60 Aligned_cols=102 Identities=18% Similarity=0.161 Sum_probs=60.4
Q ss_pred HHHHHHHHhcCCceEEEEeCCCCCCCCcccccCCCCCCCCCCchhHHhhhcCCCeeeccccchhhhhhcccccccccccC
Q 045267 290 NELALGLEMSEQRFLWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWAPQAQVLSHGSTGGFLCHCG 369 (482)
Q Consensus 290 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ipq~~lL~~~~~~~~I~HGG 369 (482)
..+++.++..+..+++..+... -||+.+.+..+..-+-+ |++ +.=-..|
T Consensus 69 ~~~~~~l~~~~~Dliv~a~y~~------------------il~~~~l~~~~~~~iNi-----------HpS--LLP~yrG 117 (209)
T 1meo_A 69 SAIDLVLEEFSIDIVCLAGFMR------------------ILSGPFVQKWNGKMLNI-----------HPS--LLPSFKG 117 (209)
T ss_dssp HHHHHHHHHTTCCEEEEESCCS------------------CCCHHHHHHTTTSEEEE-----------ESS--STTSSCS
T ss_pred HHHHHHHHhcCCCEEEEcchhh------------------hCCHHHHhhhcCCEEEE-----------ccC--cCcCCCC
Confidence 4477778888888888776532 26776665443322222 444 4444568
Q ss_pred chhHHHHhhcCCcEeecccc--ccchhhHHHHHhhcceeeeeccCCCCccCHHHHHHHHHHH
Q 045267 370 WNSVLESVVNGVPLIAWPLY--AEQKMNAVILTEDVKLALRPKANENGIVGRDEIAKVVKAL 429 (482)
Q Consensus 370 ~gs~~eal~~GvP~v~~P~~--~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~v 429 (482)
...+..|+.+|.....+-++ .+..+-+..+.+ .- +.+..+ -|.+.|.+.+.++
T Consensus 118 ~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q-~~--v~I~~~----dt~~~L~~rl~~~ 172 (209)
T 1meo_A 118 SNAHEQALETGVTVTGCTVHFVAEDVDAGQIILQ-EA--VPVKRG----DTVATLSERVKLA 172 (209)
T ss_dssp SCHHHHHHHHTCSEEEEEEEECCC---CCCEEEE-EE--EECCTT----CCHHHHHHHHHHH
T ss_pred ccHHHHHHHcCCCcEEEEEEEECCCCcCCCEEEE-EE--EecCCC----CCHHHHHHHHHHH
Confidence 99999999999998777653 233333333333 11 223333 4788888777655
No 275
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=22.01 E-value=3e+02 Score=23.37 Aligned_cols=79 Identities=9% Similarity=0.025 Sum_probs=47.8
Q ss_pred hhhhhhcccccccccccCchhHHH-------------HhhcCCcEeecccc----ccc---hhhHHHHHhhcceeeeecc
Q 045267 352 QAQVLSHGSTGGFLCHCGWNSVLE-------------SVVNGVPLIAWPLY----AEQ---KMNAVILTEDVKLALRPKA 411 (482)
Q Consensus 352 q~~lL~~~~~~~~I~HGG~gs~~e-------------al~~GvP~v~~P~~----~DQ---~~na~rv~~~~G~G~~l~~ 411 (482)
+-.+...+|. .+|.=|=+||+.. ++..++|++++|-. +.. ..|-.++.+ .|+=+..+.
T Consensus 75 hi~l~~~aD~-~vIaPaTanTlAKiA~GiaDnLlt~~a~a~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~-~G~~iv~p~ 152 (194)
T 1p3y_1 75 HVEIGRWADI-YCIIPATANILGQTANGVAMNLVATTVLAHPHNTIFFPNMNDLMWNKTVVSRNIEQLRK-DGHIVIEPV 152 (194)
T ss_dssp HHHHHHHCSE-EEEEEECHHHHHHHHTTCCSSHHHHHHHHSSSCCEEEECCCHHHHTCHHHHHHHHHHHH-HTCEECCCB
T ss_pred cccccccCCE-EEEeCCCHHHHHHHHhhccCCHHHHHHHHcCCCEEEEECCChhhcCCHHHHHHHHHHHH-CCCEEECCC
Confidence 4444444552 5555555554433 36689999999952 233 457778888 887433222
Q ss_pred CC-------------CCccCHHHHHHHHHHHhcC
Q 045267 412 NE-------------NGIVGRDEIAKVVKALMEG 432 (482)
Q Consensus 412 ~~-------------~~~~~~~~l~~ai~~vl~~ 432 (482)
.. ....+.++|.+.+.+.+.+
T Consensus 153 ~g~~f~lacg~~g~~g~~~~~~~iv~~v~~~l~~ 186 (194)
T 1p3y_1 153 EIMAFEIATGTRKPNRGLITPDKALLAIEKGFKE 186 (194)
T ss_dssp CCC------------CBCCCHHHHHHHHHHHCC-
T ss_pred CCcccccccCCcCcCCCCCCHHHHHHHHHHHhcc
Confidence 21 1225789999999888864
No 276
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=21.97 E-value=3.3e+02 Score=27.18 Aligned_cols=26 Identities=8% Similarity=0.091 Sum_probs=20.7
Q ss_pred CCCccEEEeCCCCccHHHHHHHcCCccEE
Q 045267 110 KATVAALVVDLFGTDAFDVAQEFNISPYI 138 (482)
Q Consensus 110 ~~~pD~vi~D~~~~~~~~~A~~lgIP~v~ 138 (482)
..+||++|.+. ....+|+++|||++.
T Consensus 347 ~~~pDL~ig~~---~~~~~a~~~giP~~~ 372 (525)
T 3aek_B 347 AAAPELILGTQ---MERNIAKKLGLPCAV 372 (525)
T ss_dssp HHCCSEEEECH---HHHHHHHHHTCCEEE
T ss_pred hcCCCEEEecc---hhHHHHHHcCCCEEE
Confidence 34999999875 256788999999775
No 277
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=21.94 E-value=48 Score=28.51 Aligned_cols=36 Identities=17% Similarity=0.065 Sum_probs=26.1
Q ss_pred hhhhhcccccccccccCchhHHH---HhhcCCcEeeccc
Q 045267 353 AQVLSHGSTGGFLCHCGWNSVLE---SVVNGVPLIAWPL 388 (482)
Q Consensus 353 ~~lL~~~~~~~~I~HGG~gs~~e---al~~GvP~v~~P~ 388 (482)
..++...+..+++--||.||..| ++.+|+|+++++.
T Consensus 112 k~~m~~~sda~IvlpGG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 112 SFVLLRNADVVVSIGGEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp HHHHHTTCSEEEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred HHHHHHhCCEEEEecCCCcHHHHHHHHHhcCCCEEEECC
Confidence 33444444457778899998766 4779999999973
No 278
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=21.84 E-value=5.5e+02 Score=24.83 Aligned_cols=138 Identities=14% Similarity=0.090 Sum_probs=73.0
Q ss_pred CcEEEEeccCCCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCCCCCcccccCCCCCCCCCCchhHHhhhcCCCeeecccc
Q 045267 271 GSVLFVSFGSGGTLSCEQLNELALGLEMSEQRFLWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWA 350 (482)
Q Consensus 271 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~i 350 (482)
.+.|-|-+|| ..+-+..+++...++.+|..+-.-+.+-.. .|+... .++
T Consensus 265 ~~~V~Ii~gs--~SD~~~~~~a~~~l~~~gi~~~v~V~saHR------------------~p~~~~-----------~~~ 313 (425)
T 2h31_A 265 QCRVVVLMGS--TSDLGHCEKIKKACGNFGIPCELRVTSAHK------------------GPDETL-----------RIK 313 (425)
T ss_dssp CCEEEEEESC--GGGHHHHHHHHHHHHHTTCCEEEEECCTTT------------------CHHHHH-----------HHH
T ss_pred CCeEEEEecC--cccHHHHHHHHHHHHHcCCceEEeeeeccC------------------CHHHHH-----------HHH
Confidence 3567777886 346677888888899898875444433211 333222 111
Q ss_pred chhhhhhcc-cccccccccCc-h---hHHHHhhcCCcEeeccccccchhhHHHHHhhcc----eeeeeccCCCCccCHHH
Q 045267 351 PQAQVLSHG-STGGFLCHCGW-N---SVLESVVNGVPLIAWPLYAEQKMNAVILTEDVK----LALRPKANENGIVGRDE 421 (482)
Q Consensus 351 pq~~lL~~~-~~~~~I~HGG~-g---s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G----~G~~l~~~~~~~~~~~~ 421 (482)
-+..- ... . ++|.=+|. + ++.-++ .-+|+|.+|....-......+.= .. +.+..-... .++..
T Consensus 314 ~~~~~-~g~~~--viIa~AG~~a~Lpgvva~~-t~~PVIgvP~~~~~~G~daLls~-vqmp~g~pvatv~~~---~nAa~ 385 (425)
T 2h31_A 314 AEYEG-DGIPT--VFVAVAGRSNGLGPVMSGN-TAYPVISCPPLTPDWGVQDVWSS-LRLPSGLGCSTVLSP---EGSAQ 385 (425)
T ss_dssp HHHHT-TCCCE--EEEEECCSSCCHHHHHHHH-CSSCEEECCCCCTTTHHHHGGGT-SSCCSSCCCEECCCH---HHHHH
T ss_pred HHHHH-CCCCe--EEEEEcCcccchHhHHhcc-CCCCEEEeeCccccccHHHHHHH-hcCCCCCceEEecCc---hHHHH
Confidence 11000 011 2 45554443 3 444444 57899999985332233333333 23 332211122 56677
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 045267 422 IAKVVKALMEGEQGKEVRNKMKDLKDAAAA 451 (482)
Q Consensus 422 l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~ 451 (482)
++..|. -+.|+ .++++.+..+...+.
T Consensus 386 ~A~~Il-~~~~~---~l~~kl~~~~~~~~~ 411 (425)
T 2h31_A 386 FAAQIF-GLSNH---LVWSKLRASILNTWI 411 (425)
T ss_dssp HHHHHH-HTTCH---HHHHHHHHHHHHHHH
T ss_pred HHHHHH-ccCCH---HHHHHHHHHHHHHHH
Confidence 776665 34565 777777777777665
No 279
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=21.65 E-value=63 Score=28.65 Aligned_cols=40 Identities=15% Similarity=0.179 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhhCCCccEEEeCCCCccHH-------HHHHHcCCccEEE
Q 045267 98 PCLRQELTSLVAKATVAALVVDLFGTDAF-------DVAQEFNISPYIF 139 (482)
Q Consensus 98 ~~l~~~l~~~~~~~~pD~vi~D~~~~~~~-------~~A~~lgIP~v~~ 139 (482)
+.+.+.++++ +.+||++++|...+... -+.-.+|+|+|.+
T Consensus 95 P~ll~al~~L--~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGV 141 (237)
T 3goc_A 95 PTVLAALDAL--PCPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGV 141 (237)
T ss_dssp HHHHHHHHTS--SSCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEE
T ss_pred HHHHHHHHhc--CCCCCEEEEeCceeecCCCcchhheeeeecCCCEEee
Confidence 3444444444 35899999999776543 2344468998864
No 280
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=21.65 E-value=4.3e+02 Score=23.95 Aligned_cols=108 Identities=16% Similarity=0.044 Sum_probs=54.2
Q ss_pred cCCEEEEEcCCCCCChHHHHHHHHHHHhc-CCCEEEEEcCCCCCCchhhhhhhhcCCCceeEEEecCCCCCCCcchhhHH
Q 045267 9 AAPHIVLLPSPGMGHLIPLIEFAKRLVHR-HHFLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLPVSLNDVAEDARAET 87 (482)
Q Consensus 9 ~~~~ili~~~~~~GH~~P~l~La~~L~~r-~GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 87 (482)
+++||+++.++.. | -+.+|..+..+. ...+|..+.+....+ ...... ..|+.+..+|... .
T Consensus 87 ~~~ri~vl~Sg~g-~--nl~~ll~~~~~g~l~~~i~~Visn~~~a---~~~~A~--~~gIp~~~~~~~~-------~--- 148 (287)
T 3nrb_A 87 DRKKVVIMVSKFD-H--CLGDLLYRHRLGELDMEVVGIISNHPRE---ALSVSL--VGDIPFHYLPVTP-------A--- 148 (287)
T ss_dssp CCCEEEEEECSCC-H--HHHHHHHHHHHTSSCCEEEEEEESSCGG---GCCCCC--CTTSCEEECCCCG-------G---
T ss_pred CCcEEEEEEeCCC-c--CHHHHHHHHHCCCCCeEEEEEEeCChHH---HHHHHH--HcCCCEEEEeccC-------c---
Confidence 4678999887764 3 444555555221 126777776543110 111111 2255555554221 0
Q ss_pred HHHHHHHhhhHHHHHHHHHHhhCCCccEEEeCCC-CccHHHHHHHcCCccEEEccc
Q 045267 88 VISLTVLRSLPCLRQELTSLVAKATVAALVVDLF-GTDAFDVAQEFNISPYIFYPS 142 (482)
Q Consensus 88 ~~~~~~~~~~~~l~~~l~~~~~~~~pD~vi~D~~-~~~~~~~A~~lgIP~v~~~~~ 142 (482)
......+.+.+.+++ .+||+||.-.+ -.-...+.+...-.++-++++
T Consensus 149 ----~r~~~~~~~~~~l~~----~~~Dlivlagym~il~~~~l~~~~~~~iNiHpS 196 (287)
T 3nrb_A 149 ----TKAAQESQIKNIVTQ----SQADLIVLARYMQILSDDLSAFLSGRCINIHHS 196 (287)
T ss_dssp ----GHHHHHHHHHHHHHH----HTCSEEEESSCCSCCCHHHHHHHTTSEEEEESS
T ss_pred ----chhhHHHHHHHHHHH----hCCCEEEhhhhhhhcCHHHHhhccCCeEEECcc
Confidence 001112334444444 49999996654 344555666666666665553
No 281
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=21.62 E-value=1.3e+02 Score=24.08 Aligned_cols=37 Identities=16% Similarity=0.353 Sum_probs=24.9
Q ss_pred CEE-EEEcCCCCCChHH--HHHHHHHHHhcCCCEE-EEEcCC
Q 045267 11 PHI-VLLPSPGMGHLIP--LIEFAKRLVHRHHFLV-TFFIPS 48 (482)
Q Consensus 11 ~~i-li~~~~~~GH~~P--~l~La~~L~~r~GH~V-t~~~~~ 48 (482)
|++ ++++.+.+|+-.. .+.+|+++.+. ||+| .++-..
T Consensus 13 ~~~~ivv~~~Pyg~~~a~~Al~~A~aala~-g~eV~~VFf~~ 53 (140)
T 2d1p_A 13 MRFAIVVTGPAYGTQQASSAFQFAQALIAD-GHELSSVFFYR 53 (140)
T ss_dssp CEEEEEECSCSSSSSHHHHHHHHHHHHHHT-TCEEEEEEECG
T ss_pred eEEEEEEcCCCCCcHHHHHHHHHHHHHHHC-CCccCEEEEec
Confidence 444 4445555665544 57889999888 9999 777533
No 282
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=21.61 E-value=79 Score=28.02 Aligned_cols=34 Identities=21% Similarity=0.242 Sum_probs=24.3
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
++.++++.++.| + =.++|++|.++ |++|.++...
T Consensus 7 ~k~vlVTGas~g-I--G~~~a~~l~~~-G~~v~~~~~~ 40 (264)
T 3i4f_A 7 VRHALITAGTKG-L--GKQVTEKLLAK-GYSVTVTYHS 40 (264)
T ss_dssp CCEEEETTTTSH-H--HHHHHHHHHHT-TCEEEEEESS
T ss_pred cCEEEEeCCCch-h--HHHHHHHHHHC-CCEEEEEcCC
Confidence 467777755542 2 25789999988 9999988543
No 283
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=21.58 E-value=2.8e+02 Score=28.07 Aligned_cols=27 Identities=19% Similarity=0.374 Sum_probs=22.9
Q ss_pred ccccccccC------chhHHHHhhcCCcEeecc
Q 045267 361 TGGFLCHCG------WNSVLESVVNGVPLIAWP 387 (482)
Q Consensus 361 ~~~~I~HGG------~gs~~eal~~GvP~v~~P 387 (482)
.+++++|.| .+.+.+|-+.++|+|++-
T Consensus 69 ~~v~~~tsGpG~~N~~~gl~~A~~~~vPll~It 101 (590)
T 1v5e_A 69 LGVTVGSGGPGASHLINGLYDAAMDNIPVVAIL 101 (590)
T ss_dssp CCEEEECTTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred CEEEEeCcChHHHHHHHHHHHHHhcCCCEEEEc
Confidence 448888888 668999999999999974
No 284
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=21.53 E-value=92 Score=24.40 Aligned_cols=64 Identities=9% Similarity=0.233 Sum_probs=38.9
Q ss_pred eccCCCCccCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHhhccC
Q 045267 409 PKANENGIVGRDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQLASKWNNNEG 475 (482)
Q Consensus 409 l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~ 475 (482)
++.+.+|.++.+++.+.+..++..+- -.+.+..+-+.+-...+.++...-..++|++.+.+..-
T Consensus 84 ~D~d~~G~i~~~e~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~ 147 (155)
T 3ll8_B 84 YDMDKDGYISNGELFQVLKMMVGNNL---KDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDI 147 (155)
T ss_dssp HCTTCSSCBCHHHHHHHHHHHHGGGS---CHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGGGCG
T ss_pred hCCCCCCcCcHHHHHHHHHHHhccCC---CHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhccCc
Confidence 46677888999999999988643221 11222333332222234555555678899998887654
No 285
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=21.31 E-value=76 Score=28.56 Aligned_cols=38 Identities=11% Similarity=-0.011 Sum_probs=24.8
Q ss_pred hhhccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcC
Q 045267 5 LQAQAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIP 47 (482)
Q Consensus 5 ~~~~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~ 47 (482)
|..++. ++++++.++.| + =.++|+.|+++ |++|.++..
T Consensus 10 ~~~l~g-k~~lVTGas~g-I--G~a~a~~la~~-G~~V~~~~r 47 (280)
T 3pgx_A 10 AGSLQG-RVAFITGAARG-Q--GRSHAVRLAAE-GADIIACDI 47 (280)
T ss_dssp -CTTTT-CEEEEESTTSH-H--HHHHHHHHHHT-TCEEEEEEC
T ss_pred ccccCC-CEEEEECCCcH-H--HHHHHHHHHHC-CCEEEEEec
Confidence 334433 46666655542 2 25789999988 999998853
No 286
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=21.30 E-value=4.1e+02 Score=23.19 Aligned_cols=32 Identities=6% Similarity=0.027 Sum_probs=21.3
Q ss_pred CCCccEEEeCCCCc--cHHHHHHHcCCccEEEcc
Q 045267 110 KATVAALVVDLFGT--DAFDVAQEFNISPYIFYP 141 (482)
Q Consensus 110 ~~~pD~vi~D~~~~--~~~~~A~~lgIP~v~~~~ 141 (482)
..++|.||.-.... .....+.+.|||+|.+..
T Consensus 67 ~~~vdgiIi~~~~~~~~~~~~l~~~~iPvV~~~~ 100 (292)
T 3k4h_A 67 GRQIGGIILLYSRENDRIIQYLHEQNFPFVLIGK 100 (292)
T ss_dssp TTCCCEEEESCCBTTCHHHHHHHHTTCCEEEESC
T ss_pred cCCCCEEEEeCCCCChHHHHHHHHCCCCEEEECC
Confidence 45899988755332 234566778999887544
No 287
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=21.26 E-value=3e+02 Score=23.24 Aligned_cols=43 Identities=12% Similarity=0.058 Sum_probs=28.0
Q ss_pred eccccch-hhhhhcccccccccccCchhHHHHh---------hcCCcEeeccc
Q 045267 346 VPSWAPQ-AQVLSHGSTGGFLCHCGWNSVLESV---------VNGVPLIAWPL 388 (482)
Q Consensus 346 ~~~~ipq-~~lL~~~~~~~~I~HGG~gs~~eal---------~~GvP~v~~P~ 388 (482)
.+++... ..++-..+...++--||.||.-|.. .+++|++++-.
T Consensus 94 ~~~~~~~Rk~~m~~~sda~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln~ 146 (189)
T 3sbx_A 94 VTETMWERKQVMEDRANAFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDP 146 (189)
T ss_dssp EESSHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECT
T ss_pred EcCCHHHHHHHHHHHCCEEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEecC
Confidence 3344442 3344434445778889999998874 36899999853
No 288
>3kxe_C Antitoxin protein PARD-1; complex, TA system, protein binding; 2.60A {Caulobacter crescentus NA1000}
Probab=21.23 E-value=1.2e+02 Score=22.20 Aligned_cols=51 Identities=12% Similarity=0.057 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHhhccC
Q 045267 419 RDEIAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSENGSSTKALSQLASKWNNNEG 475 (482)
Q Consensus 419 ~~~l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~ 475 (482)
.+.|+++|+.+.. -..+...|+..+.+....|.+..-..++|+..++....
T Consensus 31 SEviR~~lR~l~~------re~~l~~Lr~~l~~G~~Sg~~~~~d~d~v~a~~~~~~~ 81 (88)
T 3kxe_C 31 SEVIRAGLRLLEE------NEAKLAALRAALIEGEESGFIEDFDFDAFIEERSRASA 81 (88)
T ss_dssp HHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHTCEESSCCHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHH------HhHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHh
Confidence 4778888876643 23355678888888777666544578888888776654
No 289
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=21.18 E-value=62 Score=28.65 Aligned_cols=37 Identities=19% Similarity=0.082 Sum_probs=26.5
Q ss_pred hhccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 6 QAQAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 6 ~~~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
..+..++|.|+..|..|. .+|+.|.++ ||+|++....
T Consensus 15 ~~~~~~kIgiIG~G~mG~-----alA~~L~~~-G~~V~~~~r~ 51 (245)
T 3dtt_A 15 LYFQGMKIAVLGTGTVGR-----TMAGALADL-GHEVTIGTRD 51 (245)
T ss_dssp ----CCEEEEECCSHHHH-----HHHHHHHHT-TCEEEEEESC
T ss_pred cccCCCeEEEECCCHHHH-----HHHHHHHHC-CCEEEEEeCC
Confidence 345668899998777764 578899887 9999998643
No 290
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=21.12 E-value=57 Score=31.21 Aligned_cols=35 Identities=11% Similarity=0.023 Sum_probs=26.0
Q ss_pred hhccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEc
Q 045267 6 QAQAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFI 46 (482)
Q Consensus 6 ~~~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~ 46 (482)
..+++++|+|+..|-.| +.+|..|+++ |++|+++=
T Consensus 19 ~~~~~~dV~IVGaG~aG-----l~~A~~La~~-G~~V~v~E 53 (407)
T 3rp8_A 19 YFQGHMKAIVIGAGIGG-----LSAAVALKQS-GIDCDVYE 53 (407)
T ss_dssp ----CCEEEEECCSHHH-----HHHHHHHHHT-TCEEEEEE
T ss_pred cCCCCCEEEEECCCHHH-----HHHHHHHHhC-CCCEEEEe
Confidence 45556789999877655 7788999887 99999994
No 291
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=21.10 E-value=1.1e+02 Score=24.36 Aligned_cols=37 Identities=8% Similarity=0.191 Sum_probs=25.2
Q ss_pred CEEEEEcCCCCCChHHHH-HHHHHHHhcCCCEEEEEcCC
Q 045267 11 PHIVLLPSPGMGHLIPLI-EFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l-~La~~L~~r~GH~Vt~~~~~ 48 (482)
++|+|+-+..+|+..-+. .|++.|.++ |++|.++...
T Consensus 2 ~ki~I~y~S~tGnT~~~A~~ia~~l~~~-g~~v~~~~~~ 39 (148)
T 3f6r_A 2 SKVLIVFGSSTGNTESIAQKLEELIAAG-GHEVTLLNAA 39 (148)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHTT-TCEEEEEETT
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhC-CCeEEEEehh
Confidence 356666555678876544 467777666 9999988644
No 292
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=20.90 E-value=58 Score=30.42 Aligned_cols=31 Identities=19% Similarity=0.185 Sum_probs=26.0
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcC
Q 045267 11 PHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIP 47 (482)
Q Consensus 11 ~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~ 47 (482)
++|.|+..|..| ..+|..|.++ ||+|++...
T Consensus 15 ~kI~iIG~G~mG-----~ala~~L~~~-G~~V~~~~r 45 (335)
T 1z82_A 15 MRFFVLGAGSWG-----TVFAQMLHEN-GEEVILWAR 45 (335)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHT-TCEEEEECS
T ss_pred CcEEEECcCHHH-----HHHHHHHHhC-CCeEEEEeC
Confidence 579999988888 4678889887 999999864
No 293
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=20.89 E-value=96 Score=27.26 Aligned_cols=28 Identities=18% Similarity=0.115 Sum_probs=24.4
Q ss_pred ccccccccccCchhHHHHhhcCCcEeecccc
Q 045267 359 GSTGGFLCHCGWNSVLESVVNGVPLIAWPLY 389 (482)
Q Consensus 359 ~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~ 389 (482)
++ ++|+.||.......- .++|+|-++..
T Consensus 64 ~d--VIISRGgta~~Lr~~-~~iPVV~I~vs 91 (225)
T 2pju_A 64 CD--AIIAAGSNGAYLKSR-LSVPVILIKPS 91 (225)
T ss_dssp CS--EEEEEHHHHHHHHTT-CSSCEEEECCC
T ss_pred Ce--EEEeCChHHHHHHhh-CCCCEEEecCC
Confidence 56 999999999999975 68999999974
No 294
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=20.87 E-value=1.4e+02 Score=27.85 Aligned_cols=34 Identities=12% Similarity=-0.068 Sum_probs=22.4
Q ss_pred ccCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcC
Q 045267 8 QAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIP 47 (482)
Q Consensus 8 ~~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~ 47 (482)
|.+|||+|+. .-+-...+.++|.++ ||+|..+.+
T Consensus 20 ~~~mrIvf~G-----~~~fa~~~L~~L~~~-~~~i~~Vvt 53 (329)
T 2bw0_A 20 FQSMKIAVIG-----QSLFGQEVYCHLRKE-GHEVVGVFT 53 (329)
T ss_dssp -CCCEEEEEC-----CHHHHHHHHHHHHHT-TCEEEEEEE
T ss_pred CCCCEEEEEc-----CcHHHHHHHHHHHHC-CCeEEEEEe
Confidence 3358899993 223333567888887 999986664
No 295
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=20.84 E-value=4.7e+02 Score=23.67 Aligned_cols=105 Identities=10% Similarity=0.080 Sum_probs=0.0
Q ss_pred cCCEEEEEcCCCCCChHHHHHHHHHHHhcCC---CEEEEEcCCCCCCchhhhhhhhcCCCceeEEEecCCCCCCCcchhh
Q 045267 9 AAPHIVLLPSPGMGHLIPLIEFAKRLVHRHH---FLVTFFIPSDGPPSEAQKSTLESLPSSINSVFLPVSLNDVAEDARA 85 (482)
Q Consensus 9 ~~~~ili~~~~~~GH~~P~l~La~~L~~r~G---H~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 85 (482)
+++||+++.++.. .-+.+|..+- +. | .+|..+.+............ |+.+..+|.....
T Consensus 89 ~~~ri~vl~Sg~g---~~l~~ll~~~-~~-g~l~~~i~~Visn~~~~~~~A~~~------gIp~~~~~~~~~~------- 150 (286)
T 3n0v_A 89 HRPKVVIMVSKAD---HCLNDLLYRQ-RI-GQLGMDVVAVVSNHPDLEPLAHWH------KIPYYHFALDPKD------- 150 (286)
T ss_dssp CCCEEEEEESSCC---HHHHHHHHHH-HT-TSSCCEEEEEEESSSTTHHHHHHT------TCCEEECCCBTTB-------
T ss_pred CCcEEEEEEeCCC---CCHHHHHHHH-HC-CCCCcEEEEEEeCcHHHHHHHHHc------CCCEEEeCCCcCC-------
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHhhCCCccEEE-eCCCCccHHHHHHHcCCccEEEccc
Q 045267 86 ETVISLTVLRSLPCLRQELTSLVAKATVAALV-VDLFGTDAFDVAQEFNISPYIFYPS 142 (482)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~l~~~~~~~~pD~vi-~D~~~~~~~~~A~~lgIP~v~~~~~ 142 (482)
.....+.+.+++++.+||+|| +.++-.-...+.+...-.++-++++
T Consensus 151 -----------r~~~~~~~~~~l~~~~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 197 (286)
T 3n0v_A 151 -----------KPGQERKVLQVIEETGAELVILARYMQVLSPELCRRLDGWAINIHHS 197 (286)
T ss_dssp -----------HHHHHHHHHHHHHHHTCSEEEESSCCSCCCHHHHHHTTTSEEEEEEC
T ss_pred -----------HHHHHHHHHHHHHhcCCCEEEecccccccCHHHHhhhcCCeEEeccc
No 296
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=20.81 E-value=1.3e+02 Score=27.60 Aligned_cols=34 Identities=18% Similarity=0.091 Sum_probs=22.6
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 10 APHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 10 ~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
+|+|++.. +.|-+= ..|++.|.++ ||+|+.+.-.
T Consensus 5 ~~~vlVTG--atG~iG--~~l~~~L~~~-G~~V~~~~r~ 38 (341)
T 3enk_A 5 KGTILVTG--GAGYIG--SHTAVELLAH-GYDVVIADNL 38 (341)
T ss_dssp SCEEEEET--TTSHHH--HHHHHHHHHT-TCEEEEECCC
T ss_pred CcEEEEec--CCcHHH--HHHHHHHHHC-CCcEEEEecC
Confidence 45565543 334332 4688999888 9999998643
No 297
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=20.79 E-value=1.4e+02 Score=22.02 Aligned_cols=48 Identities=13% Similarity=0.080 Sum_probs=34.2
Q ss_pred hcCCcEeeccccccchhhHHHHHhhcceeeeeccCCCCccCHHHHHHHHHHHhcC
Q 045267 378 VNGVPLIAWPLYAEQKMNAVILTEDVKLALRPKANENGIVGRDEIAKVVKALMEG 432 (482)
Q Consensus 378 ~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~vl~~ 432 (482)
...+|+|++ ..+.........+ .|+--.+.+. ++.++|.++|+.++..
T Consensus 78 ~~~~~ii~~--~~~~~~~~~~~~~-~g~~~~l~kp----~~~~~l~~~i~~~~~~ 125 (127)
T 2gkg_A 78 LKNVPIVII--GNPDGFAQHRKLK-AHADEYVAKP----VDADQLVERAGALIGF 125 (127)
T ss_dssp TTTSCEEEE--ECGGGHHHHHHST-TCCSEEEESS----CCHHHHHHHHHHHHCC
T ss_pred ccCCCEEEE--ecCCchhHHHHHH-hCcchheeCC----CCHHHHHHHHHHHHcC
Confidence 357899998 4444555555666 6776556553 7999999999998864
No 298
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=20.78 E-value=2.5e+02 Score=25.86 Aligned_cols=104 Identities=13% Similarity=0.129 Sum_probs=60.9
Q ss_pred HHHHHHHHHhcCCceEEEEeCCCCCCCCcccccCCCCCCCCCCchhHHhhhcCCCeeeccccchhhhhhccccccccccc
Q 045267 289 LNELALGLEMSEQRFLWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWAPQAQVLSHGSTGGFLCHC 368 (482)
Q Consensus 289 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ipq~~lL~~~~~~~~I~HG 368 (482)
-.++++.++..+..+++..+... -||+.+.+..+..-+=+ |++ +.=...
T Consensus 170 ~~~~~~~l~~~~~DliVlagym~------------------IL~~~~l~~~~~~~INi-----------HpS--lLP~fr 218 (302)
T 3o1l_A 170 FAEVSRLVGHHQADVVVLARYMQ------------------ILPPQLCREYAHQVINI-----------HHS--FLPSFV 218 (302)
T ss_dssp HHHHHHHHHHTTCSEEEESSCCS------------------CCCTTHHHHTTTCEEEE-----------ESS--CTTSSC
T ss_pred HHHHHHHHHHhCCCEEEHhHhhh------------------hcCHHHHhhhhCCeEEe-----------Ccc--cccCCC
Confidence 34577777777777777765532 35666655443322212 344 333456
Q ss_pred CchhHHHHhhcCCcEeeccccc--cchhhHHHHHhhcceeeeeccCCCCccCHHHHHHHHHHHh
Q 045267 369 GWNSVLESVVNGVPLIAWPLYA--EQKMNAVILTEDVKLALRPKANENGIVGRDEIAKVVKALM 430 (482)
Q Consensus 369 G~gs~~eal~~GvP~v~~P~~~--DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~vl 430 (482)
|++.+..|+.+|+....+-.+. +..+-+..+.+ . -+.+... -|.+.|.+.+.++-
T Consensus 219 G~~p~~~Ai~~G~k~tG~TvH~v~~~lD~GpII~Q-~--~v~I~~~----dt~~~L~~r~~~~e 275 (302)
T 3o1l_A 219 GAKPYHQASLRGVKLIGATCHYVTEELDAGPIIEQ-D--VVRVSHR----DSIENMVRFGRDVE 275 (302)
T ss_dssp SSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEE-E--EEECCTT----CCHHHHHHHHHHHH
T ss_pred CccHHHHHHHcCCCeEEEEEEEECCCCcCCCeEEE-E--EEecCCC----CCHHHHHHHHHHHH
Confidence 9999999999999998877532 22222222222 1 1223333 48888888887663
No 299
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=20.76 E-value=28 Score=31.12 Aligned_cols=34 Identities=12% Similarity=0.187 Sum_probs=26.2
Q ss_pred ccCCEEEEEcCCCCCChHHHHHHHHHHHhcCC----CEEEEEcC
Q 045267 8 QAAPHIVLLPSPGMGHLIPLIEFAKRLVHRHH----FLVTFFIP 47 (482)
Q Consensus 8 ~~~~~ili~~~~~~GH~~P~l~La~~L~~r~G----H~Vt~~~~ 47 (482)
|++|+|.|+..|..|.. +|+.|.++ | |+|+++..
T Consensus 2 m~~m~i~iiG~G~mG~~-----~a~~l~~~-g~~~~~~v~~~~~ 39 (262)
T 2rcy_A 2 MENIKLGFMGLGQMGSA-----LAHGIANA-NIIKKENLFYYGP 39 (262)
T ss_dssp CSSSCEEEECCSHHHHH-----HHHHHHHH-TSSCGGGEEEECS
T ss_pred CCCCEEEEECcCHHHHH-----HHHHHHHC-CCCCCCeEEEEeC
Confidence 45678999988877754 67788777 9 89988753
No 300
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=20.67 E-value=77 Score=29.21 Aligned_cols=35 Identities=14% Similarity=-0.032 Sum_probs=22.9
Q ss_pred cCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 9 AAPHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 9 ~~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
+.|+|++. |+.|.+= ..|++.|.++ ||+|+.+.-.
T Consensus 2 ~~~~vlVt--GatG~iG--~~l~~~L~~~-G~~V~~~~r~ 36 (345)
T 2z1m_A 2 SGKRALIT--GIRGQDG--AYLAKLLLEK-GYEVYGADRR 36 (345)
T ss_dssp -CCEEEEE--TTTSHHH--HHHHHHHHHT-TCEEEEECSC
T ss_pred CCCEEEEE--CCCChHH--HHHHHHHHHC-CCEEEEEECC
Confidence 34566655 3444433 4678889888 9999998743
No 301
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=20.62 E-value=52 Score=30.42 Aligned_cols=32 Identities=19% Similarity=0.038 Sum_probs=26.4
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 10 APHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 10 ~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
+|+|+|+..|+.|- .+|..|. + ||+|+++...
T Consensus 2 ~mkI~IiGaGa~G~-----~~a~~L~-~-g~~V~~~~r~ 33 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-----LCAYYLS-L-YHDVTVVTRR 33 (307)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHH-T-TSEEEEECSC
T ss_pred CCEEEEECCCHHHH-----HHHHHHh-c-CCceEEEECC
Confidence 36899999998885 5678887 7 9999999754
No 302
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=20.54 E-value=1.6e+02 Score=27.02 Aligned_cols=103 Identities=17% Similarity=0.121 Sum_probs=62.9
Q ss_pred HHHHHHHHhcCCceEEEEeCCCCCCCCcccccCCCCCCCCCCchhHHhhhcCCCeeeccccchhhhhhcccccccccccC
Q 045267 290 NELALGLEMSEQRFLWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWAPQAQVLSHGSTGGFLCHCG 369 (482)
Q Consensus 290 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ipq~~lL~~~~~~~~I~HGG 369 (482)
.++++.++..+..+++..+.. .-||+.+.+..+..-+-+ |++ +.=...|
T Consensus 161 ~~~~~~l~~~~~Dlivla~y~------------------~il~~~~l~~~~~~~iNi-----------HpS--lLP~~rG 209 (292)
T 3lou_A 161 AQWLDVFETSGAELVILARYM------------------QVLSPEASARLANRAINI-----------HHS--FLPGFKG 209 (292)
T ss_dssp HHHHHHHHHHTCSEEEESSCC------------------SCCCHHHHHHTTTSEEEE-----------EEE--CSSCCCS
T ss_pred HHHHHHHHHhCCCEEEecCch------------------hhCCHHHHhhhcCCeEEe-----------CCC--cCcCCCC
Confidence 457777888888888777653 236777765554332222 444 4444679
Q ss_pred chhHHHHhhcCCcEeeccccc--cchhhHHHHHhhcceeeeeccCCCCccCHHHHHHHHHHHh
Q 045267 370 WNSVLESVVNGVPLIAWPLYA--EQKMNAVILTEDVKLALRPKANENGIVGRDEIAKVVKALM 430 (482)
Q Consensus 370 ~gs~~eal~~GvP~v~~P~~~--DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~vl 430 (482)
.+.+..|+.+|+....+-.+. +..+-+..+.+ . -+.+... -|.+.|.+.+.++-
T Consensus 210 ~~p~~~Ai~~G~~~~G~Tvh~v~~~lD~G~Ii~Q-~--~v~i~~~----dt~~~L~~r~~~~e 265 (292)
T 3lou_A 210 AKPYHQAHARGVKLIGATAHFVTDDLDEGPIIEQ-V--VERVDHS----YRPEQLLAVGRDVE 265 (292)
T ss_dssp SCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEE-E--EEECCTT----CCHHHHHHHHHHHH
T ss_pred ccHHHHHHHcCCCeEEEEEEEEcCCCcCCCEEEE-E--EEEcCCC----CCHHHHHHHHHHHH
Confidence 999999999999998877532 22222222222 1 1223333 48888888887653
No 303
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=20.43 E-value=50 Score=28.37 Aligned_cols=38 Identities=11% Similarity=0.079 Sum_probs=17.4
Q ss_pred hhhccCCEEEEEcCCCC--CChHHHHHHHHHHHhcCCCEEE
Q 045267 5 LQAQAAPHIVLLPSPGM--GHLIPLIEFAKRLVHRHHFLVT 43 (482)
Q Consensus 5 ~~~~~~~~ili~~~~~~--GH~~P~l~La~~L~~r~GH~Vt 43 (482)
|..|.+|||+++....+ |...-++....+..+. |++|.
T Consensus 1 m~~M~~mkIl~I~GS~r~~s~t~~la~~~~~~~~~-g~~v~ 40 (199)
T 4hs4_A 1 MTTTSPLHFVTLLGSLRKASFNAAVARALPEIAPE-GIAIT 40 (199)
T ss_dssp ----CCEEEEEEECCCSTTCHHHHHHHHHHHHCCT-TEEEE
T ss_pred CCCCCCCEEEEEEcCCCCCChHHHHHHHHHHHccC-CCEEE
Confidence 34466677777765544 3333333333333334 67776
No 304
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=20.39 E-value=83 Score=27.95 Aligned_cols=36 Identities=8% Similarity=0.061 Sum_probs=30.2
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 12 HIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 12 ~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
.|+|..-|+.|-..=...||..|+++ |++|.++=..
T Consensus 3 vI~vs~KGGvGKTT~a~nLA~~la~~-G~~VlliD~D 38 (269)
T 1cp2_A 3 QVAIYGKGGIGKSTTTQNLTSGLHAM-GKTIMVVGCD 38 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHTT-TCCEEEEEEC
T ss_pred EEEEecCCCCcHHHHHHHHHHHHHHC-CCcEEEEcCC
Confidence 46676667889999999999999887 9999998544
No 305
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=20.36 E-value=93 Score=28.23 Aligned_cols=34 Identities=6% Similarity=0.123 Sum_probs=23.4
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcCC
Q 045267 10 APHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIPS 48 (482)
Q Consensus 10 ~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~~ 48 (482)
+++|+++ |+.|.+- ..++++|.++ ||+|+.++-.
T Consensus 4 ~~~ilVt--GatG~iG--~~l~~~L~~~-g~~V~~~~R~ 37 (313)
T 1qyd_A 4 KSRVLIV--GGTGYIG--KRIVNASISL-GHPTYVLFRP 37 (313)
T ss_dssp CCCEEEE--STTSTTH--HHHHHHHHHT-TCCEEEECCS
T ss_pred CCEEEEE--cCCcHHH--HHHHHHHHhC-CCcEEEEECC
Confidence 3456665 4445553 4578889888 9999998754
No 306
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=20.32 E-value=2.1e+02 Score=24.89 Aligned_cols=102 Identities=15% Similarity=0.149 Sum_probs=62.2
Q ss_pred HHHHHHHHhcCCceEEEEeCCCCCCCCcccccCCCCCCCCCCchhHHhhhcCCCeeeccccchhhhhhcccccccccccC
Q 045267 290 NELALGLEMSEQRFLWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWAPQAQVLSHGSTGGFLCHCG 369 (482)
Q Consensus 290 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ipq~~lL~~~~~~~~I~HGG 369 (482)
.++++.++.....+++..+... -||+.+.+..+..-+-+ |++ +.=...|
T Consensus 72 ~~~~~~L~~~~~Dlivlagy~~------------------IL~~~~l~~~~~~~iNi-----------HpS--LLP~yrG 120 (215)
T 3kcq_A 72 EHISTVLREHDVDLVCLAGFMS------------------ILPEKFVTDWHHKIINI-----------HPS--LLPSFKG 120 (215)
T ss_dssp HHHHHHHHHTTCSEEEESSCCS------------------CCCHHHHHHTTTSEEEE-----------ESS--CTTTTCS
T ss_pred HHHHHHHHHhCCCEEEEeCCce------------------EeCHHHHhhccCCeEEE-----------Ccc--cccCCCC
Confidence 4567777788888888776532 36777665543322212 444 4444578
Q ss_pred chhHHHHhhcCCcEeeccccc--cchhhHHHHHhhcceeeeeccCCCCccCHHHHHHHHHHH
Q 045267 370 WNSVLESVVNGVPLIAWPLYA--EQKMNAVILTEDVKLALRPKANENGIVGRDEIAKVVKAL 429 (482)
Q Consensus 370 ~gs~~eal~~GvP~v~~P~~~--DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~v 429 (482)
...+..|+.+|.....+-++. +..+-+..+.+ . -+.+..+ -|.+.|.+.+.++
T Consensus 121 ~~pi~~Ai~~G~~~tGvTvh~v~~~lD~G~Ii~Q-~--~v~I~~~----dt~~~L~~rl~~~ 175 (215)
T 3kcq_A 121 LNAQEQAYKAGVKIAGCTLHYVYQELDAGPIIMQ-A--AVPVLRE----DTAESLASRILAA 175 (215)
T ss_dssp SCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEE-E--EEECCTT----CCHHHHHHHHHHH
T ss_pred ccHHHHHHHcCCCeEEEEEEEEcCCCCCCCEEEE-E--EeecCCC----CCHHHHHHHHHHH
Confidence 999999999999988777532 33333333333 1 1223333 4788888877655
No 307
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=20.27 E-value=87 Score=24.45 Aligned_cols=33 Identities=15% Similarity=0.285 Sum_probs=21.6
Q ss_pred CCCccEEEeCCCCcc--HHHHHHHc---------CCccEEEccc
Q 045267 110 KATVAALVVDLFGTD--AFDVAQEF---------NISPYIFYPS 142 (482)
Q Consensus 110 ~~~pD~vi~D~~~~~--~~~~A~~l---------gIP~v~~~~~ 142 (482)
..+||+||.|...+. +..+++.+ .+|+++++..
T Consensus 56 ~~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 56 EEDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp HSCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 358999999976543 55555443 3787776654
No 308
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=20.24 E-value=1.3e+02 Score=26.22 Aligned_cols=43 Identities=19% Similarity=0.129 Sum_probs=31.6
Q ss_pred hhhhccCCEEEEEcCCCCC----ChHHHHHHHHHHHhcCCCEEEEEcC
Q 045267 4 TLQAQAAPHIVLLPSPGMG----HLIPLIEFAKRLVHRHHFLVTFFIP 47 (482)
Q Consensus 4 ~~~~~~~~~ili~~~~~~G----H~~P~l~La~~L~~r~GH~Vt~~~~ 47 (482)
+|..+.++.|.+++.-..| +..-...|++.|+++ |+.|.+-..
T Consensus 31 ~l~~~~~~~VaV~Gss~~~~~~~~~~~A~~lg~~La~~-g~~lVsGGg 77 (217)
T 1wek_A 31 TLSELQVPLVSVFGSARFGEGHPAYEAGYRLGRALAEA-GFGVVTGGG 77 (217)
T ss_dssp HHHHCCSCEEEEECCSSCCTTSHHHHHHHHHHHHHHHH-TCEEEECSC
T ss_pred HHhhcCCCEEEEEeCCCCCCCcHHHHHHHHHHHHHHHC-CCEEEeCCh
Confidence 3444443568888876665 456688899999988 999888765
No 309
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=20.22 E-value=50 Score=30.34 Aligned_cols=32 Identities=13% Similarity=-0.055 Sum_probs=26.0
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEEcC
Q 045267 10 APHIVLLPSPGMGHLIPLIEFAKRLVHRHHFLVTFFIP 47 (482)
Q Consensus 10 ~~~ili~~~~~~GH~~P~l~La~~L~~r~GH~Vt~~~~ 47 (482)
+|+|.|+..|..|. .+|+.|.++ ||+|+++..
T Consensus 7 ~~~I~iIG~G~mG~-----~~a~~l~~~-G~~V~~~dr 38 (303)
T 3g0o_A 7 DFHVGIVGLGSMGM-----GAARSCLRA-GLSTWGADL 38 (303)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHHT-TCEEEEECS
T ss_pred CCeEEEECCCHHHH-----HHHHHHHHC-CCeEEEEEC
Confidence 46899998887774 678899887 999998853
No 310
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=20.22 E-value=3.6e+02 Score=22.08 Aligned_cols=132 Identities=16% Similarity=0.184 Sum_probs=69.5
Q ss_pred EEeccCCCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCCCCCcccccCCCCCCCCCCchhHHhhhcCCCeeeccccchhh
Q 045267 275 FVSFGSGGTLSCEQLNELALGLEMSEQRFLWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWAPQAQ 354 (482)
Q Consensus 275 ~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ipq~~ 354 (482)
-|-+|| ..+-+..++....++.++..+-..+-+-.. .|+.+. .
T Consensus 3 ~Iimgs--~SD~~v~~~a~~~l~~~gi~~dv~V~saHR------------------~p~~~~-----------~------ 45 (157)
T 2ywx_A 3 CIIMGS--ESDLKIAEKAVNILKEFGVEFEVRVASAHR------------------TPELVE-----------E------ 45 (157)
T ss_dssp EEEESS--GGGHHHHHHHHHHHHHTTCCEEEEECCTTT------------------CHHHHH-----------H------
T ss_pred EEEEcc--HHHHHHHHHHHHHHHHcCCCeEEEEEcccC------------------CHHHHH-----------H------
Confidence 344555 346667788888888888775444433211 334322 1
Q ss_pred hhhcccccccccccCch----hHHHHhhcCCcEeeccccccchhhHHHHHhhc----ceeee-eccCCCCccCHHHHHHH
Q 045267 355 VLSHGSTGGFLCHCGWN----SVLESVVNGVPLIAWPLYAEQKMNAVILTEDV----KLALR-PKANENGIVGRDEIAKV 425 (482)
Q Consensus 355 lL~~~~~~~~I~HGG~g----s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~----G~G~~-l~~~~~~~~~~~~l~~a 425 (482)
+...+.-+++|.=.|.. ++.-++ .-+|+|.+|....-......+.- . |+.+. +..+ +..+...++..
T Consensus 46 ~~~~a~~~ViIa~AG~aa~Lpgvva~~-t~~PVIgVP~~~~l~G~daLlS~-vqmP~gvpVatV~I~--~~~nAa~lA~~ 121 (157)
T 2ywx_A 46 IVKNSKADVFIAIAGLAAHLPGVVASL-TTKPVIAVPVDAKLDGLDALLSS-VQMPPGIPVATVGID--RGENAAILALE 121 (157)
T ss_dssp HHHHCCCSEEEEEEESSCCHHHHHHTT-CSSCEEEEEECSSGGGHHHHHHH-HSCCTTSCCEECCTT--CHHHHHHHHHH
T ss_pred HHHhcCCCEEEEEcCchhhhHHHHHhc-cCCCEEEecCCCccCcHHHHHHH-hcCCCCCeeEEEecC--CcHHHHHHHHH
Confidence 11111002566555433 333333 46899999983322223333222 2 43221 2211 12667777766
Q ss_pred HHHHhcCCchHHHHHHHHHHHHHHHH
Q 045267 426 VKALMEGEQGKEVRNKMKDLKDAAAA 451 (482)
Q Consensus 426 i~~vl~~~~~~~~r~~a~~l~~~~~~ 451 (482)
|. -+.|+ +++++.+.+++++++
T Consensus 122 Il-~~~d~---~l~~kl~~~r~~~~~ 143 (157)
T 2ywx_A 122 IL-ALKDE---NIAKKLIEYREKMKK 143 (157)
T ss_dssp HH-TTTCH---HHHHHHHHHHHHHHH
T ss_pred HH-hcCCH---HHHHHHHHHHHHHHH
Confidence 64 33465 889999988888886
No 311
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=20.16 E-value=3.8e+02 Score=22.28 Aligned_cols=146 Identities=14% Similarity=0.129 Sum_probs=76.5
Q ss_pred CcEEEEeccCCCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCCCCCcccccCCCCCCCCCCchhHHhhhcCCCeeecccc
Q 045267 271 GSVLFVSFGSGGTLSCEQLNELALGLEMSEQRFLWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWA 350 (482)
Q Consensus 271 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~i 350 (482)
+|.|-|-+|| ..+-+..++....|+.++..+-..+.+-.. .|+.+. .|+
T Consensus 11 ~~~V~IimGS--~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR------------------~p~~l~-----------~~~ 59 (170)
T 1xmp_A 11 KSLVGVIMGS--TSDWETMKYACDILDELNIPYEKKVVSAHR------------------TPDYMF-----------EYA 59 (170)
T ss_dssp CCSEEEEESS--GGGHHHHHHHHHHHHHTTCCEEEEECCTTT------------------SHHHHH-----------HHH
T ss_pred CCcEEEEECc--HHHHHHHHHHHHHHHHcCCCEEEEEEeccC------------------CHHHHH-----------HHH
Confidence 4577777886 346677888888888898875544433211 334322 111
Q ss_pred chhhhhhcccccccccccCch----hHHHHhhcCCcEeecccccc-chhhHHHHHh-h--cceee-eeccCCCCccCHHH
Q 045267 351 PQAQVLSHGSTGGFLCHCGWN----SVLESVVNGVPLIAWPLYAE-QKMNAVILTE-D--VKLAL-RPKANENGIVGRDE 421 (482)
Q Consensus 351 pq~~lL~~~~~~~~I~HGG~g----s~~eal~~GvP~v~~P~~~D-Q~~na~rv~~-~--~G~G~-~l~~~~~~~~~~~~ 421 (482)
.+.+ -...+ ++|.=.|.. ++.-++ .-+|+|.+|.... -......+.= . .|+.+ .+..++-+..+...
T Consensus 60 ~~a~-~~g~~--ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlSivqmP~GvpVatV~I~~a~~~nAal 135 (170)
T 1xmp_A 60 ETAR-ERGLK--VIIAGAGGAAHLPGMVAAK-TNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIGKAGSTNAGL 135 (170)
T ss_dssp HHTT-TTTCC--EEEEEEESSCCHHHHHHTT-CCSCEEEEEECCTTTTTHHHHHHHHCCCTTCCCEECCSSHHHHHHHHH
T ss_pred HHHH-hCCCc--EEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEecCCcchHHHHH
Confidence 1000 00122 555544433 333333 4689999998542 2222222222 0 13332 12222001256666
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhc
Q 045267 422 IAKVVKALMEGEQGKEVRNKMKDLKDAAAAVLSE 455 (482)
Q Consensus 422 l~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~ 455 (482)
++..|. -+.|+ +++++.+.+++++++...+
T Consensus 136 lAaqIl-a~~d~---~l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 136 LAAQIL-GSFHD---DIHDALELRREAIEKDVRE 165 (170)
T ss_dssp HHHHHH-HTTCH---HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHH-ccCCH---HHHHHHHHHHHHHHHHHHh
Confidence 666665 34566 8999999999988875443
No 312
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=20.13 E-value=2.2e+02 Score=24.60 Aligned_cols=102 Identities=16% Similarity=0.152 Sum_probs=62.1
Q ss_pred HHHHHHHHhcCCceEEEEeCCCCCCCCcccccCCCCCCCCCCchhHHhhhcCCCeeeccccchhhhhhcccccccccccC
Q 045267 290 NELALGLEMSEQRFLWVVRSPNNAANSTFFSVNSHKDPYDFLPKGFLDRTKGRGMLVPSWAPQAQVLSHGSTGGFLCHCG 369 (482)
Q Consensus 290 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~~~~~ipq~~lL~~~~~~~~I~HGG 369 (482)
.++++.++.....+++..+... -||+.+.+..+..-+ --|++ +.=...|
T Consensus 76 ~~~~~~l~~~~~Dliv~agy~~------------------il~~~~l~~~~~~~i-----------NiHpS--LLP~yrG 124 (209)
T 4ds3_A 76 DAILAALDVLKPDIICLAGYMR------------------LLSGRFIAPYEGRIL-----------NIHPS--LLPLFPG 124 (209)
T ss_dssp HHHHHHHHHHCCSEEEESSCCS------------------CCCHHHHGGGTTCEE-----------EEESS--CTTSSCS
T ss_pred HHHHHHHHhcCCCEEEEecccc------------------CcCHHHHhhccCCeE-----------EECCc--cccCCCC
Confidence 4577888888888888876532 367776655432222 22555 4445679
Q ss_pred chhHHHHhhcCCcEeeccccc--cchhhHHHHHhhcceeeeeccCCCCccCHHHHHHHHHHH
Q 045267 370 WNSVLESVVNGVPLIAWPLYA--EQKMNAVILTEDVKLALRPKANENGIVGRDEIAKVVKAL 429 (482)
Q Consensus 370 ~gs~~eal~~GvP~v~~P~~~--DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ai~~v 429 (482)
...+..|+.+|.....+-++. +..+-+..+.+ . -+.+..+ -|.+.|.+.+.++
T Consensus 125 ~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q-~--~v~I~~~----dt~~~L~~r~~~~ 179 (209)
T 4ds3_A 125 LHTHQRALDAGMKLAGCTVHLVTEGMDEGPILAQ-A--AVPVLDG----DTAETLAARVLKA 179 (209)
T ss_dssp SCHHHHHHHTTCSEEEEEEEECCC--CCCCEEEE-E--EEECCTT----CCHHHHHHHHHHH
T ss_pred hhHHHHHHHcCCCeEEEEEEEEcCCCCCCCeEEE-E--EEecCCC----CCHHHHHHHHHHH
Confidence 999999999999988776532 33333332222 1 1223333 4788888877654
Done!