Query 045269
Match_columns 99
No_of_seqs 161 out of 1133
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 20:24:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045269.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045269hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kb6_A D-lactate dehydrogenase 100.0 4.5E-36 1.5E-40 221.8 4.8 94 1-94 217-325 (334)
2 4g2n_A D-isomer specific 2-hyd 100.0 4.8E-34 1.7E-38 211.9 10.5 95 1-96 250-344 (345)
3 3pp8_A Glyoxylate/hydroxypyruv 100.0 2.1E-33 7.2E-38 206.3 10.7 94 1-96 216-309 (315)
4 3hg7_A D-isomer specific 2-hyd 100.0 4.1E-33 1.4E-37 205.5 11.8 94 1-96 217-310 (324)
5 3jtm_A Formate dehydrogenase, 100.0 1E-33 3.5E-38 210.5 8.6 95 1-95 243-337 (351)
6 3evt_A Phosphoglycerate dehydr 100.0 3.9E-33 1.3E-37 205.6 10.0 96 1-96 214-310 (324)
7 4hy3_A Phosphoglycerate oxidor 100.0 1E-32 3.5E-37 206.1 11.5 95 1-96 253-347 (365)
8 3gg9_A D-3-phosphoglycerate de 100.0 1.4E-32 4.7E-37 204.5 11.5 92 1-92 238-329 (352)
9 4e5n_A Thermostable phosphite 100.0 9.9E-33 3.4E-37 203.6 9.8 96 1-96 223-325 (330)
10 2yq5_A D-isomer specific 2-hyd 100.0 1.3E-32 4.4E-37 204.2 8.9 96 1-96 223-331 (343)
11 2pi1_A D-lactate dehydrogenase 100.0 2.4E-33 8.4E-38 207.2 3.9 96 1-96 217-327 (334)
12 4dgs_A Dehydrogenase; structur 100.0 1.5E-32 5.2E-37 203.6 8.1 95 1-96 245-339 (340)
13 2j6i_A Formate dehydrogenase; 100.0 3.4E-32 1.2E-36 202.9 9.9 90 1-90 244-338 (364)
14 1j4a_A D-LDH, D-lactate dehydr 100.0 6.5E-32 2.2E-36 199.2 9.7 96 1-96 222-330 (333)
15 2nac_A NAD-dependent formate d 100.0 9.9E-32 3.4E-36 202.4 10.8 97 1-97 270-366 (393)
16 3k5p_A D-3-phosphoglycerate de 100.0 8.3E-32 2.8E-36 204.0 9.8 97 1-97 231-332 (416)
17 1xdw_A NAD+-dependent (R)-2-hy 100.0 1.6E-31 5.4E-36 197.0 8.1 96 1-96 221-330 (331)
18 1sc6_A PGDH, D-3-phosphoglycer 100.0 3.2E-31 1.1E-35 200.1 8.6 96 1-96 220-319 (404)
19 1dxy_A D-2-hydroxyisocaproate 100.0 1.4E-31 4.8E-36 197.5 6.2 96 1-96 220-328 (333)
20 1qp8_A Formate dehydrogenase; 100.0 3.8E-30 1.3E-34 187.9 10.1 96 1-96 197-295 (303)
21 2cuk_A Glycerate dehydrogenase 100.0 1.3E-29 4.6E-34 185.5 12.1 95 1-96 216-310 (311)
22 2g76_A 3-PGDH, D-3-phosphoglyc 100.0 4.3E-30 1.5E-34 190.0 9.5 93 1-94 242-334 (335)
23 1mx3_A CTBP1, C-terminal bindi 100.0 4.7E-29 1.6E-33 185.1 12.0 99 1-99 246-346 (347)
24 1wwk_A Phosphoglycerate dehydr 100.0 3.7E-29 1.3E-33 182.8 10.3 89 1-89 219-307 (307)
25 3gvx_A Glycerate dehydrogenase 100.0 3.8E-29 1.3E-33 181.9 7.7 88 1-91 196-284 (290)
26 1gdh_A D-glycerate dehydrogena 100.0 2.3E-28 7.7E-33 179.5 11.2 92 1-94 225-316 (320)
27 2ekl_A D-3-phosphoglycerate de 100.0 4.7E-29 1.6E-33 182.6 7.5 90 2-92 220-312 (313)
28 3ba1_A HPPR, hydroxyphenylpyru 100.0 3.6E-28 1.2E-32 179.5 9.8 94 2-96 239-332 (333)
29 3oet_A Erythronate-4-phosphate 100.0 1.4E-28 4.9E-33 184.6 7.5 90 1-92 197-286 (381)
30 2o4c_A Erythronate-4-phosphate 99.9 1.1E-27 3.9E-32 179.7 9.6 92 1-94 194-285 (380)
31 2gcg_A Glyoxylate reductase/hy 99.9 3E-27 1E-31 173.8 10.7 95 2-96 234-328 (330)
32 2w2k_A D-mandelate dehydrogena 99.9 2E-27 6.7E-32 176.1 8.9 94 2-96 244-337 (348)
33 2d0i_A Dehydrogenase; structur 99.9 5.4E-27 1.9E-31 172.9 10.6 93 2-96 224-317 (333)
34 2dbq_A Glyoxylate reductase; D 99.9 3.3E-27 1.1E-31 174.0 9.3 94 2-96 228-321 (334)
35 1ygy_A PGDH, D-3-phosphoglycer 99.9 2.4E-24 8.4E-29 166.7 12.2 95 1-96 219-313 (529)
36 1v8b_A Adenosylhomocysteinase; 99.7 7.4E-19 2.5E-23 135.1 1.9 90 1-95 331-429 (479)
37 3d64_A Adenosylhomocysteinase; 99.7 2.1E-19 7.3E-24 138.5 -2.6 90 1-96 351-445 (494)
38 1gtm_A Glutamate dehydrogenase 99.4 1.3E-14 4.3E-19 110.0 -3.5 79 2-87 285-385 (419)
39 3ce6_A Adenosylhomocysteinase; 99.1 2.9E-12 9.9E-17 98.8 -1.8 90 2-97 349-446 (494)
40 2vhw_A Alanine dehydrogenase; 98.4 5.5E-07 1.9E-11 66.8 6.1 48 1-70 255-307 (377)
41 2eez_A Alanine dehydrogenase; 97.8 2.1E-06 7E-11 63.4 -1.2 75 1-94 253-338 (369)
42 3h9u_A Adenosylhomocysteinase; 96.7 0.00084 2.9E-08 51.1 2.8 27 1-27 285-312 (436)
43 3n58_A Adenosylhomocysteinase; 96.6 0.00024 8.2E-09 54.5 -0.8 26 1-26 321-347 (464)
44 1gpj_A Glutamyl-tRNA reductase 96.2 0.0048 1.6E-07 45.9 4.4 81 8-91 230-326 (404)
45 3gvp_A Adenosylhomocysteinase 94.9 0.0037 1.3E-07 47.6 -0.5 25 1-25 294-319 (435)
46 2g5c_A Prephenate dehydrogenas 92.6 0.6 2E-05 32.2 7.5 67 3-72 85-154 (281)
47 2rir_A Dipicolinate synthase, 89.5 0.14 4.7E-06 36.3 1.6 18 1-18 233-250 (300)
48 3d4o_A Dipicolinate synthase s 86.8 0.14 4.9E-06 36.1 0.3 17 2-18 232-248 (293)
49 3b1f_A Putative prephenate deh 86.3 1.8 6.2E-05 29.8 5.9 62 4-67 91-158 (290)
50 1x13_A NAD(P) transhydrogenase 83.9 0.28 9.4E-06 36.5 0.7 21 1-21 279-301 (401)
51 1c1d_A L-phenylalanine dehydro 81.4 0.53 1.8E-05 34.7 1.3 26 7-33 254-279 (355)
52 4e12_A Diketoreductase; oxidor 76.1 15 0.0005 25.3 7.5 60 3-74 110-169 (283)
53 3ggo_A Prephenate dehydrogenas 75.6 12 0.00042 26.4 7.1 69 3-74 117-188 (314)
54 1iwp_B Glycerol dehydratase be 75.5 8.5 0.00029 26.1 5.8 80 10-99 71-155 (194)
55 4dio_A NAD(P) transhydrogenase 74.1 1.3 4.3E-05 33.3 1.6 21 1-21 299-321 (405)
56 1l7d_A Nicotinamide nucleotide 73.1 1.4 4.9E-05 32.2 1.6 20 1-20 281-302 (384)
57 1eex_B Propanediol dehydratase 72.0 12 0.00041 26.0 5.9 80 10-99 104-188 (224)
58 1ytm_A Phosphoenolpyruvate car 64.1 12 0.0004 29.2 5.1 76 7-85 429-513 (532)
59 2q3e_A UDP-glucose 6-dehydroge 63.9 6.5 0.00022 29.4 3.6 58 3-60 120-181 (467)
60 2f1k_A Prephenate dehydrogenas 63.2 24 0.00081 23.8 6.2 66 3-72 80-148 (279)
61 1j3b_A ATP-dependent phosphoen 63.0 8.7 0.0003 29.8 4.2 77 6-88 419-515 (529)
62 3p2y_A Alanine dehydrogenase/p 60.5 2.8 9.5E-05 31.2 1.0 19 2-20 290-310 (381)
63 3ond_A Adenosylhomocysteinase; 56.1 4.2 0.00014 31.2 1.4 16 1-16 339-354 (488)
64 2olr_A Phosphoenolpyruvate car 55.9 6 0.0002 30.9 2.2 76 7-85 435-519 (540)
65 4ezb_A Uncharacterized conserv 54.8 14 0.00049 26.0 3.9 32 2-33 109-140 (317)
66 4e21_A 6-phosphogluconate dehy 52.8 9.7 0.00033 27.6 2.8 40 2-41 103-142 (358)
67 3qha_A Putative oxidoreductase 49.6 8.9 0.00031 26.6 2.2 33 2-34 93-125 (296)
68 3pdu_A 3-hydroxyisobutyrate de 47.2 16 0.00054 25.0 3.1 32 2-33 83-114 (287)
69 3g0o_A 3-hydroxyisobutyrate de 44.1 17 0.00058 25.2 2.9 32 2-33 90-121 (303)
70 4dll_A 2-hydroxy-3-oxopropiona 42.8 21 0.00071 25.0 3.2 32 3-34 113-144 (320)
71 2h78_A Hibadh, 3-hydroxyisobut 42.6 22 0.00074 24.4 3.3 32 2-33 85-116 (302)
72 2zkm_X 1-phosphatidylinositol- 42.4 34 0.0012 27.7 4.7 79 9-91 321-436 (799)
73 1yb4_A Tartronic semialdehyde 42.4 18 0.00061 24.6 2.8 30 2-31 84-113 (295)
74 4gwg_A 6-phosphogluconate dehy 41.1 24 0.00084 26.8 3.5 40 2-41 91-130 (484)
75 2cvz_A Dehydrogenase, 3-hydrox 40.8 21 0.00072 24.1 2.9 30 2-31 78-107 (289)
76 3l6d_A Putative oxidoreductase 40.1 27 0.00094 24.2 3.5 35 4-40 91-125 (306)
77 4dio_A NAD(P) transhydrogenase 39.3 27 0.00092 26.1 3.5 39 2-42 106-144 (405)
78 4g9i_A Hydrogenase maturation 38.8 28 0.00096 28.1 3.7 38 56-93 417-454 (772)
79 3p2y_A Alanine dehydrogenase/p 38.7 30 0.001 25.6 3.6 40 2-43 100-139 (381)
80 1vpd_A Tartronate semialdehyde 38.5 33 0.0011 23.3 3.6 29 3-31 88-116 (299)
81 3pef_A 6-phosphogluconate dehy 36.0 21 0.00072 24.4 2.3 31 3-33 84-114 (287)
82 3doj_A AT3G25530, dehydrogenas 35.4 18 0.00061 25.2 1.9 32 2-33 103-134 (310)
83 2pv7_A T-protein [includes: ch 35.4 12 0.0004 26.1 0.9 54 3-64 88-142 (298)
84 3vth_A Hydrogenase maturation 34.9 44 0.0015 27.0 4.3 36 56-91 419-454 (761)
85 2d0o_B DIOL dehydratase-reacti 33.5 88 0.003 19.5 6.9 73 12-96 39-115 (125)
86 3qsg_A NAD-binding phosphogluc 31.3 31 0.0011 24.1 2.6 38 2-39 105-142 (312)
87 3obb_A Probable 3-hydroxyisobu 31.2 55 0.0019 22.9 3.9 38 1-40 84-121 (300)
88 1ii2_A Phosphoenolpyruvate car 31.2 22 0.00074 27.6 1.8 78 7-87 408-504 (524)
89 3qr0_A Phospholipase C-beta (P 30.9 54 0.0019 26.7 4.2 79 8-91 331-444 (816)
90 2uyy_A N-PAC protein; long-cha 29.3 47 0.0016 22.8 3.2 32 2-33 112-143 (316)
91 3ttc_A HYPF, transcriptional r 29.0 36 0.0012 27.1 2.8 36 56-91 322-357 (657)
92 3u8e_A Papain-like cysteine pr 28.4 47 0.0016 22.1 3.0 23 19-42 114-136 (222)
93 3cuq_A Vacuolar-sorting protei 27.6 21 0.00071 24.8 1.1 28 11-38 104-134 (234)
94 3cky_A 2-hydroxymethyl glutara 26.0 44 0.0015 22.7 2.6 29 3-31 87-115 (301)
95 1djx_A PLC-D1, phosphoinositid 25.9 69 0.0023 25.0 3.9 79 9-91 173-285 (624)
96 3pnu_A Dihydroorotase; TIM bar 25.5 26 0.00091 25.4 1.4 24 19-42 240-264 (359)
97 2b0a_A Hypothetical protein MJ 25.4 66 0.0022 21.1 3.2 42 4-45 81-132 (186)
98 1o0e_A Ervatamin C; plant cyst 25.3 58 0.002 21.4 3.0 22 20-42 115-136 (208)
99 1iwd_A Ervatamin B; cysteine p 25.1 58 0.002 21.5 3.0 22 20-42 116-137 (215)
100 2pa8_L DNA-directed RNA polyme 25.0 1.1E+02 0.0037 17.8 5.9 51 29-87 34-84 (92)
101 1np3_A Ketol-acid reductoisome 24.9 7.3 0.00025 27.8 -1.7 54 3-65 96-155 (338)
102 2cio_A Papain; hydrolase/inhib 24.8 60 0.002 21.4 3.0 22 20-42 117-138 (212)
103 2jwk_A Protein TOLR; periplasm 24.7 81 0.0028 16.6 3.1 25 5-30 11-38 (74)
104 2p12_A Hypothetical protein DU 24.4 37 0.0013 22.6 1.8 20 15-34 116-135 (176)
105 1jqk_A CODH, carbon monoxide d 24.1 54 0.0018 26.1 2.9 30 14-46 426-455 (639)
106 3cuq_B Vacuolar protein-sortin 24.0 26 0.0009 23.8 1.0 23 11-33 105-128 (218)
107 1oao_A CODH, carbon monoxide d 24.0 52 0.0018 26.4 2.9 47 14-63 445-499 (674)
108 2zyd_A 6-phosphogluconate dehy 23.7 70 0.0024 24.0 3.5 32 2-33 101-132 (480)
109 1su8_A CODH 2, carbon monoxide 22.8 53 0.0018 26.1 2.7 29 14-45 421-449 (636)
110 2gf2_A Hibadh, 3-hydroxyisobut 21.9 58 0.002 22.0 2.5 28 3-30 83-110 (296)
111 2g7o_A Protein TRAM; four heli 21.5 47 0.0016 18.8 1.6 28 60-87 33-64 (70)
112 1cqd_A Protein (protease II); 21.1 61 0.0021 21.5 2.4 21 20-41 119-139 (221)
113 2z16_A Matrix protein 1, M1; A 20.7 72 0.0025 20.7 2.5 19 16-34 41-59 (165)
114 2bdz_A Mexicain; cysteine prot 20.5 68 0.0023 21.2 2.6 21 20-41 117-137 (214)
115 1ppo_A Protease omega; hydrola 20.4 77 0.0026 20.9 2.8 21 20-41 117-137 (216)
116 1r61_A Metal-dependent hydrola 20.2 90 0.0031 20.7 3.1 42 4-46 99-150 (207)
No 1
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=100.00 E-value=4.5e-36 Score=221.84 Aligned_cols=94 Identities=26% Similarity=0.288 Sum_probs=88.3
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCC---------------ccccCCceEeccCCC
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPND---------------PILKFQSVLITPHVG 65 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~---------------~l~~~~nvi~TPH~a 65 (99)
|++||+|++|||+|||++|||+||++||++|+|+||+||||++||++.++ |||++|||++|||+|
T Consensus 217 l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g~i~gA~LDV~~~EPl~~~~~~~~~~~~~~~~~~~~L~~~~nvilTPHia 296 (334)
T 3kb6_A 217 ISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVIITPHIA 296 (334)
T ss_dssp HHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEECCSCT
T ss_pred HhhcCCCeEEEecCccccccHHHHHHHHHhCCceEEEEeCCCCCCCcccccccccccccccccchhhccCCCEEECCchh
Confidence 46899999999999999999999999999999999999999999976555 688999999999999
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHcCCCCCc
Q 045269 66 GVTEHSYRSTAKVVGDVALQLHAGTPLTG 94 (99)
Q Consensus 66 ~~t~~~~~~~~~~~~~~l~~~~~g~~~~~ 94 (99)
|+|.+++.++.+.+++|+.+|++|++...
T Consensus 297 ~~T~ea~~~~~~~~~~ni~~~l~Ge~~~~ 325 (334)
T 3kb6_A 297 YYTDKSLERIREETVKVVKAFVKGDLEQI 325 (334)
T ss_dssp TCBHHHHHHHHHHHHHHHHHHHHTCGGGG
T ss_pred hChHHHHHHHHHHHHHHHHHHHcCCCCcC
Confidence 99999999999999999999999987653
No 2
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=100.00 E-value=4.8e-34 Score=211.94 Aligned_cols=95 Identities=23% Similarity=0.362 Sum_probs=91.6
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCCccccCCceEeccCCCCCcHHHHHHHHHHHH
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPNDPILKFQSVLITPHVGGVTEHSYRSTAKVVG 80 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~~~~~~~~~ 80 (99)
|++||+|++|||+|||++||++||+++|++|+|+||+||||++|| +.++|||++|||++|||+||+|.+++.++.+.++
T Consensus 250 l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~LDVf~~EP-~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~ 328 (345)
T 4g2n_A 250 IAKIPEGAVVINISRGDLINDDALIEALRSKHLFAAGLDVFANEP-AIDPRYRSLDNIFLTPHIGSATHETRDAMGWLLI 328 (345)
T ss_dssp HHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTT-SCCTTGGGCTTEEECCSCTTCBHHHHHHHHHHHH
T ss_pred HhhCCCCcEEEECCCCchhCHHHHHHHHHhCCceEEEecCCCCCC-CCCchHHhCCCEEEcCccCcCCHHHHHHHHHHHH
Confidence 457999999999999999999999999999999999999999999 7899999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCccc
Q 045269 81 DVALQLHAGTPLTGIE 96 (99)
Q Consensus 81 ~~l~~~~~g~~~~~~~ 96 (99)
+|+.+|++|+++.+.|
T Consensus 329 ~ni~~~l~g~~~~~~V 344 (345)
T 4g2n_A 329 QGIEALNQSDVPDNLI 344 (345)
T ss_dssp HHHHHHHTTCCCTTBC
T ss_pred HHHHHHHcCCCCCCCc
Confidence 9999999999998864
No 3
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=100.00 E-value=2.1e-33 Score=206.26 Aligned_cols=94 Identities=28% Similarity=0.458 Sum_probs=90.0
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCCccccCCceEeccCCCCCcHHHHHHHHHHHH
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPNDPILKFQSVLITPHVGGVTEHSYRSTAKVVG 80 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~~~~~~~~~ 80 (99)
|++||+|++|||+|||++||++||+++|++|++.||+||||++||++.++|||++|||++|||+||+|.+ .++.+.++
T Consensus 216 l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~--~~~~~~~~ 293 (315)
T 3pp8_A 216 LDQLPDGAYVLNLARGVHVQEADLLAALDSGKLKGAMLDVFSQEPLPQESPLWRHPRVAMTPHIAAVTRP--AEAIDYIS 293 (315)
T ss_dssp HTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGGCTTEEECSSCSSCCCH--HHHHHHHH
T ss_pred HhhCCCCCEEEECCCChhhhHHHHHHHHHhCCccEEEcCCCCCCCCCCCChhhcCCCEEECCCCCcccHH--HHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999999999999999986 57899999
Q ss_pred HHHHHHHcCCCCCccc
Q 045269 81 DVALQLHAGTPLTGIE 96 (99)
Q Consensus 81 ~~l~~~~~g~~~~~~~ 96 (99)
+|+.+|++|+++.++|
T Consensus 294 ~ni~~~~~G~~~~~~V 309 (315)
T 3pp8_A 294 RTITQLEKGEPVTGQV 309 (315)
T ss_dssp HHHHHHHHTCCCCCBC
T ss_pred HHHHHHHcCCCCCceE
Confidence 9999999999998865
No 4
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=100.00 E-value=4.1e-33 Score=205.53 Aligned_cols=94 Identities=24% Similarity=0.379 Sum_probs=90.0
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCCccccCCceEeccCCCCCcHHHHHHHHHHHH
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPNDPILKFQSVLITPHVGGVTEHSYRSTAKVVG 80 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~~~~~~~~~ 80 (99)
|++||+|++|||+|||++||++||+++|++|+++||++|||++||++.++|||++|||++|||+||+|.+ .++.+.++
T Consensus 217 l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~--~~~~~~~~ 294 (324)
T 3hg7_A 217 FEHCKPGAILFNVGRGNAINEGDLLTALRTGKLGMAVLDVFEQEPLPADSPLWGQPNLIITPHNSAYSFP--DDVAQIFV 294 (324)
T ss_dssp TTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSSSEEEESCCSSSSCCTTCTTTTCTTEEECCSCSSCCCH--HHHHHHHH
T ss_pred HhcCCCCcEEEECCCchhhCHHHHHHHHHcCCceEEEeccCCCCCCCCCChhhcCCCEEEeCCCccccHH--HHHHHHHH
Confidence 6789999999999999999999999999999999999999999999999999999999999999999987 57899999
Q ss_pred HHHHHHHcCCCCCccc
Q 045269 81 DVALQLHAGTPLTGIE 96 (99)
Q Consensus 81 ~~l~~~~~g~~~~~~~ 96 (99)
+|+.+|++|+++.+++
T Consensus 295 ~nl~~~~~G~~~~~~V 310 (324)
T 3hg7_A 295 RNYIRFIDGQPLDGKI 310 (324)
T ss_dssp HHHHHHHTTCCCTTBC
T ss_pred HHHHHHHcCCCCcceE
Confidence 9999999999998865
No 5
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=100.00 E-value=1e-33 Score=210.55 Aligned_cols=95 Identities=26% Similarity=0.367 Sum_probs=90.6
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCCccccCCceEeccCCCCCcHHHHHHHHHHHH
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPNDPILKFQSVLITPHVGGVTEHSYRSTAKVVG 80 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~~~~~~~~~ 80 (99)
|++||+|++|||+|||++||++||+++|++|+|.||++|||++||++.++|||++|||++|||+||+|.+++.++.+.++
T Consensus 243 l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~pL~~~~nvilTPHia~~t~ea~~~~~~~~~ 322 (351)
T 3jtm_A 243 IGKLKKGVLIVNNARGAIMERQAVVDAVESGHIGGYSGDVWDPQPAPKDHPWRYMPNQAMTPHTSGTTIDAQLRYAAGTK 322 (351)
T ss_dssp HHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCGGGSHHHHHHHHHHHH
T ss_pred HhcCCCCCEEEECcCchhhCHHHHHHHHHhCCccEEEeCCCCCCCCCCCChhhcCCCEEECCcCCCCCHHHHHHHHHHHH
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcc
Q 045269 81 DVALQLHAGTPLTGI 95 (99)
Q Consensus 81 ~~l~~~~~g~~~~~~ 95 (99)
+|+.+|++|++++..
T Consensus 323 ~nl~~~~~g~~~~~~ 337 (351)
T 3jtm_A 323 DMLERYFKGEDFPTE 337 (351)
T ss_dssp HHHHHHHHTCCCCGG
T ss_pred HHHHHHHcCCCCCCc
Confidence 999999999974443
No 6
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=100.00 E-value=3.9e-33 Score=205.56 Aligned_cols=96 Identities=26% Similarity=0.355 Sum_probs=90.8
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCCccccCCceEeccCCCCCcHHHHHHHHHHHH
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPNDPILKFQSVLITPHVGGVTEHSYRSTAKVVG 80 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~~~~~~~~~ 80 (99)
|++||+|++|||+|||++||++||+++|++|+++||++|||++||++.++|||++|||++|||+||+|.+++.++.+.++
T Consensus 214 l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~~~~~~~~~~~ 293 (324)
T 3evt_A 214 FQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDVTEPEPLPTDHPLWQRDDVLITPHISGQIAHFRATVFPIFA 293 (324)
T ss_dssp HHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESSCSSSSCCTTCGGGGCSSEEECCSCTTCCCCHHHHHHHHHH
T ss_pred HhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCCCCCCCCCCCChhhcCCCEEEcCccccChHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcC-CCCCccc
Q 045269 81 DVALQLHAG-TPLTGIE 96 (99)
Q Consensus 81 ~~l~~~~~g-~~~~~~~ 96 (99)
+|+.+|++| +++.|+|
T Consensus 294 ~nl~~~l~~~~~~~n~V 310 (324)
T 3evt_A 294 ANFAQFVKDGTLVRNQV 310 (324)
T ss_dssp HHHHHHHHHSCCCSCBC
T ss_pred HHHHHHHhCCCCCCceE
Confidence 999999965 4667754
No 7
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=100.00 E-value=1e-32 Score=206.15 Aligned_cols=95 Identities=18% Similarity=0.349 Sum_probs=91.4
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCCccccCCceEeccCCCCCcHHHHHHHHHHHH
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPNDPILKFQSVLITPHVGGVTEHSYRSTAKVVG 80 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~~~~~~~~~ 80 (99)
|++||+|++|||+|||++||++||+++|++|+|+ |+||||++||++.++|||++|||++|||+||+|.+++.++...++
T Consensus 253 l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~-aaLDV~~~EPl~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~ 331 (365)
T 4hy3_A 253 FSSMRRGAAFILLSRADVVDFDALMAAVSSGHIV-AASDVYPEEPLPLDHPVRSLKGFIRSAHRAGALDSAFKKMGDMVL 331 (365)
T ss_dssp HHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSE-EEESCCSSSSCCTTCGGGTCTTEEECCSCSSCCHHHHHHHHHHHH
T ss_pred HhcCCCCcEEEECcCCchhCHHHHHHHHHcCCce-EEeeCCCCCCCCCCChhhcCCCEEECCccccCHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999998 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCccc
Q 045269 81 DVALQLHAGTPLTGIE 96 (99)
Q Consensus 81 ~~l~~~~~g~~~~~~~ 96 (99)
+|+.+|++|+++.+.+
T Consensus 332 ~ni~~~~~G~~~~~~v 347 (365)
T 4hy3_A 332 EDMDLMDRGLPPMRCK 347 (365)
T ss_dssp HHHHHHHTTCCCCSSE
T ss_pred HHHHHHHcCCCccccc
Confidence 9999999999988754
No 8
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=99.98 E-value=1.4e-32 Score=204.49 Aligned_cols=92 Identities=25% Similarity=0.376 Sum_probs=89.6
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCCccccCCceEeccCCCCCcHHHHHHHHHHHH
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPNDPILKFQSVLITPHVGGVTEHSYRSTAKVVG 80 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~~~~~~~~~ 80 (99)
|++||+|++|||+|||++||++||+++|++|+|+||++|||++||++.++|||++|||++|||+||+|.+++.++.+.++
T Consensus 238 l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~ 317 (352)
T 3gg9_A 238 LTRMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAIDVFETEPILQGHTLLRMENCICTPHIGYVERESYEMYFGIAF 317 (352)
T ss_dssp HTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEECCCSSSCCCSCCGGGGCTTEEECCSCTTCBHHHHHHHHHHHH
T ss_pred HhhCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEecccCCCCCCCCChhhcCCCEEECCCCCCCCHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCC
Q 045269 81 DVALQLHAGTPL 92 (99)
Q Consensus 81 ~~l~~~~~g~~~ 92 (99)
+|+.+|++|+++
T Consensus 318 ~ni~~~~~G~p~ 329 (352)
T 3gg9_A 318 QNILDILQGNVD 329 (352)
T ss_dssp HHHHHHHTTCCT
T ss_pred HHHHHHHcCCCC
Confidence 999999999875
No 9
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=99.98 E-value=9.9e-33 Score=203.60 Aligned_cols=96 Identities=31% Similarity=0.403 Sum_probs=92.8
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCC-------CCCCCCccccCCceEeccCCCCCcHHHHH
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTE-------PFDPNDPILKFQSVLITPHVGGVTEHSYR 73 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~E-------p~~~~~~l~~~~nvi~TPH~a~~t~~~~~ 73 (99)
|++||+|++|||+|||++||++||+++|++|+|.||++|||+.| |++.++|||++|||++|||+||+|.+++.
T Consensus 223 l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~E~~~~~~~Pl~~~~~L~~~~nvilTPHia~~t~e~~~ 302 (330)
T 4e5n_A 223 LALVRPGALLVNPCRGSVVDEAAVLAALERGQLGGYAADVFEMEDWARADRPQQIDPALLAHPNTLFTPHIGSAVRAVRL 302 (330)
T ss_dssp HTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCGGGCTTCTTCCSSCCHHHHTCSSEEECSSCTTCCHHHHH
T ss_pred HhhCCCCcEEEECCCCchhCHHHHHHHHHhCCccEEEecccccccccccCCCCCCCchHHcCCCEEECCcCCCChHHHHH
Confidence 47899999999999999999999999999999999999999999 98899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCCCccc
Q 045269 74 STAKVVGDVALQLHAGTPLTGIE 96 (99)
Q Consensus 74 ~~~~~~~~~l~~~~~g~~~~~~~ 96 (99)
++.+.+++|+.+|++|+++.+.|
T Consensus 303 ~~~~~~~~ni~~~~~g~~~~~~v 325 (330)
T 4e5n_A 303 EIERCAAQNILQALAGERPINAV 325 (330)
T ss_dssp HHHHHHHHHHHHHHTTSCCTTBS
T ss_pred HHHHHHHHHHHHHHcCCCCCCcc
Confidence 99999999999999999988865
No 10
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=99.97 E-value=1.3e-32 Score=204.16 Aligned_cols=96 Identities=30% Similarity=0.437 Sum_probs=90.5
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCC--CCCC-----------CccccCCceEeccCCCCC
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEP--FDPN-----------DPILKFQSVLITPHVGGV 67 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep--~~~~-----------~~l~~~~nvi~TPH~a~~ 67 (99)
|++||+|++|||+|||++||++||+++|++|++.||+||||++|| ++.+ +|||++|||++|||+||+
T Consensus 223 l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~l~~~~~pL~~~~nvilTPHia~~ 302 (343)
T 2yq5_A 223 LKEMKKSAYLINCARGELVDTGALIKALQDGEIAGAGLDTLAGESSYFGHTGLTDSEIPEDYKTLAKMPNVVITPHSAFY 302 (343)
T ss_dssp HHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSCEEESCCTTGGGTTTCCSCCTTTSCHHHHHHTTCTTEEECSSCTTC
T ss_pred HhhCCCCcEEEECCCChhhhHHHHHHHHHcCCCcEEEecccccCCCccccccccccccccchhHHhcCCCEEECCccccc
Confidence 457999999999999999999999999999999999999999999 4554 489999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHcCCCCCccc
Q 045269 68 TEHSYRSTAKVVGDVALQLHAGTPLTGIE 96 (99)
Q Consensus 68 t~~~~~~~~~~~~~~l~~~~~g~~~~~~~ 96 (99)
|.+++.++.+.+++|+.+|++|+++.+.+
T Consensus 303 t~ea~~~~~~~~~~ni~~~l~g~~~~~~v 331 (343)
T 2yq5_A 303 TETSIRNMVQICLTDQLTIAKGGRPRSIV 331 (343)
T ss_dssp BHHHHHHHHHHHHHHHHHHHTTCCCTTBC
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCCCCceE
Confidence 99999999999999999999999998865
No 11
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=99.97 E-value=2.4e-33 Score=207.20 Aligned_cols=96 Identities=25% Similarity=0.264 Sum_probs=91.6
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCC---------------CCCCccccCCceEeccCCC
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPF---------------DPNDPILKFQSVLITPHVG 65 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~---------------~~~~~l~~~~nvi~TPH~a 65 (99)
|++||+|++|||+|||++||++||+++|++|++.||++|||+.||+ +.++|||++|||++|||+|
T Consensus 217 l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~~~~~~~~~~~~~~pL~~~~nvilTPHia 296 (334)
T 2pi1_A 217 ISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVIITPHIA 296 (334)
T ss_dssp HHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEECCSCT
T ss_pred HhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEeecCCCCCCccccccccccccccCccCChhhcCCCEEECCccc
Confidence 3579999999999999999999999999999999999999999997 4688999999999999999
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHcCCCCCccc
Q 045269 66 GVTEHSYRSTAKVVGDVALQLHAGTPLTGIE 96 (99)
Q Consensus 66 ~~t~~~~~~~~~~~~~~l~~~~~g~~~~~~~ 96 (99)
|+|.+++.++.+.+++|+.+|++|+++.+.|
T Consensus 297 ~~t~e~~~~~~~~~~~ni~~~~~g~~~~~~V 327 (334)
T 2pi1_A 297 YYTDKSLERIREETVKVVKAFVKGDLEQIKG 327 (334)
T ss_dssp TCBHHHHHHHHHHHHHHHHHHHHTCGGGGGG
T ss_pred cChHHHHHHHHHHHHHHHHHHHcCCCCCceE
Confidence 9999999999999999999999999998865
No 12
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=99.97 E-value=1.5e-32 Score=203.56 Aligned_cols=95 Identities=25% Similarity=0.365 Sum_probs=76.4
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCCccccCCceEeccCCCCCcHHHHHHHHHHHH
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPNDPILKFQSVLITPHVGGVTEHSYRSTAKVVG 80 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~~~~~~~~~ 80 (99)
|++||+|++|||+|||++||++||+++|++|+|+||+||||++||++. +|||++|||++|||+||+|.+++.++.+.++
T Consensus 245 l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDVf~~EP~~~-~~L~~~~nvilTPHia~~t~e~~~~~~~~~~ 323 (340)
T 4dgs_A 245 LQALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDVFVNEPAIR-SEFHTTPNTVLMPHQGSATVETRMAMGKLVL 323 (340)
T ss_dssp HHHTTTTCEEEECSCC--------------CCSSEEEESCCSSSSSCC-SHHHHSSSEEECSSCSSCCHHHHHHHHHHHH
T ss_pred HhcCCCCCEEEECCCCcccCHHHHHHHHHcCCceEEEeCCcCCCCCCc-cchhhCCCEEEcCcCCcCCHHHHHHHHHHHH
Confidence 357999999999999999999999999999999999999999999754 5999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCccc
Q 045269 81 DVALQLHAGTPLTGIE 96 (99)
Q Consensus 81 ~~l~~~~~g~~~~~~~ 96 (99)
+|+.+|++|+++.+.|
T Consensus 324 ~nl~~~~~g~~~~~~V 339 (340)
T 4dgs_A 324 ANLAAHFAGEKAPNTV 339 (340)
T ss_dssp HHHHHHHTTSCCTTBC
T ss_pred HHHHHHHcCCCCCCCc
Confidence 9999999999998865
No 13
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=99.97 E-value=3.4e-32 Score=202.92 Aligned_cols=90 Identities=30% Similarity=0.402 Sum_probs=88.0
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCCccccC--C---ceEeccCCCCCcHHHHHHH
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPNDPILKF--Q---SVLITPHVGGVTEHSYRST 75 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~~l~~~--~---nvi~TPH~a~~t~~~~~~~ 75 (99)
|++||+|++|||+|||++||++||+++|++|+|.||+||||++||++.++|||.+ | ||++|||+||+|.+++.++
T Consensus 244 l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g~i~gA~LDVf~~EP~~~~~pL~~~~~~~~~nvilTPHia~~t~e~~~~~ 323 (364)
T 2j6i_A 244 LSKFKKGAWLVNTARGAICVAEDVAAALESGQLRGYGGDVWFPQPAPKDHPWRDMRNKYGAGNAMTPHYSGTTLDAQTRY 323 (364)
T ss_dssp HTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCHHHHCCCTTSCCEEECCSCGGGSHHHHHHH
T ss_pred HhhCCCCCEEEECCCCchhCHHHHHHHHHcCCCcEEEEecCCCCCCCCCChHHhccCCccCcEEECCccCcCCHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999 9 9999999999999999999
Q ss_pred HHHHHHHHHHHHcCC
Q 045269 76 AKVVGDVALQLHAGT 90 (99)
Q Consensus 76 ~~~~~~~l~~~~~g~ 90 (99)
.+.+++|+.+|++|+
T Consensus 324 ~~~~~~nl~~~~~g~ 338 (364)
T 2j6i_A 324 AQGTVNILESFFTGK 338 (364)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCC
Confidence 999999999999998
No 14
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=99.97 E-value=6.5e-32 Score=199.18 Aligned_cols=96 Identities=28% Similarity=0.356 Sum_probs=89.6
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCC--CCCCC-----------ccccCCceEeccCCCCC
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEP--FDPND-----------PILKFQSVLITPHVGGV 67 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep--~~~~~-----------~l~~~~nvi~TPH~a~~ 67 (99)
|++||+|++|||+|||++||++||+++|++|+|+||+||||++|| ++.++ |||++|||++|||+||+
T Consensus 222 l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~l~~~~~~~~~~~p~~~~L~~~~nvilTPHia~~ 301 (333)
T 1j4a_A 222 IAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDVYEGEVGIFNEDWEGKEFPDARLADLIARPNVLVTPKTAFY 301 (333)
T ss_dssp HHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTCTTTTTSBCTTSCCSCHHHHHHHHCTTEEECSSCTTC
T ss_pred HhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEEecCCCCCCccccccccccCCccchhhHHhCCCEEECCccccC
Confidence 357999999999999999999999999999999999999999999 44443 69999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHcCCCCCccc
Q 045269 68 TEHSYRSTAKVVGDVALQLHAGTPLTGIE 96 (99)
Q Consensus 68 t~~~~~~~~~~~~~~l~~~~~g~~~~~~~ 96 (99)
|.+++.++.+.+++|+.+|++|+++.+++
T Consensus 302 t~~~~~~~~~~~~~nl~~~~~g~~~~~~v 330 (333)
T 1j4a_A 302 TTHAVRNMVVKAFDNNLELVEGKEAETPV 330 (333)
T ss_dssp BHHHHHHHHHHHHHHHHHHHTTCCCSSBC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCccc
Confidence 99999999999999999999999988865
No 15
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=99.97 E-value=9.9e-32 Score=202.39 Aligned_cols=97 Identities=28% Similarity=0.352 Sum_probs=93.5
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCCccccCCceEeccCCCCCcHHHHHHHHHHHH
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPNDPILKFQSVLITPHVGGVTEHSYRSTAKVVG 80 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~~~~~~~~~ 80 (99)
|++||+|++|||+|||++||++||.++|++|+|.||++|||++||++.++|||++|||++|||+|++|.+++.++.+.++
T Consensus 270 l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~pL~~~~nvilTPHia~~T~e~~~~~~~~~~ 349 (393)
T 2nac_A 270 LKLFKRGAYIVNTARGKLCDRDAVARALESGRLAGYAGDVWFPQPAPKDHPWRTMPYNGMTPHISGTTLTAQARYAAGTR 349 (393)
T ss_dssp HTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCTTCSHHHHHHHHHHHH
T ss_pred HhhCCCCCEEEECCCchHhhHHHHHHHHHcCCeeEEEEEecCCCCCCCCChhHcCCCEEECCCCCcCcHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcccc
Q 045269 81 DVALQLHAGTPLTGIEP 97 (99)
Q Consensus 81 ~~l~~~~~g~~~~~~~~ 97 (99)
+|+.+|++|+++.+.+.
T Consensus 350 ~nl~~~~~G~~~~~~~~ 366 (393)
T 2nac_A 350 EILECFFEGRPIRDEYL 366 (393)
T ss_dssp HHHHHHHHTCCCCGGGE
T ss_pred HHHHHHHcCCCCcceeE
Confidence 99999999999998653
No 16
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=99.97 E-value=8.3e-32 Score=204.02 Aligned_cols=97 Identities=29% Similarity=0.480 Sum_probs=89.1
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCC----CccccCCceEeccCCCCCcHHHHHHHH
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPN----DPILKFQSVLITPHVGGVTEHSYRSTA 76 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~----~~l~~~~nvi~TPH~a~~t~~~~~~~~ 76 (99)
|++||+|++|||+|||++||++||+++|++|+++||++|||+.||++.+ +|||++|||++|||+||+|.|++.++.
T Consensus 231 l~~mk~gailIN~aRG~vvd~~aL~~aL~~g~i~gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~ 310 (416)
T 3k5p_A 231 LRKMKKGAFLINNARGSDVDLEALAKVLQEGHLAGAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGGSTEEAQERIG 310 (416)
T ss_dssp HHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCTTCCHHHHHHHH
T ss_pred HhhCCCCcEEEECCCChhhhHHHHHHHHHcCCccEEEeCCCCCCCCCcccccchhHhcCCCEEECCCCCCCCHHHHHHHH
Confidence 4579999999999999999999999999999999999999999998665 799999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCc-ccc
Q 045269 77 KVVGDVALQLHAGTPLTG-IEP 97 (99)
Q Consensus 77 ~~~~~~l~~~~~g~~~~~-~~~ 97 (99)
..+++|+.+|++++.+.+ +++
T Consensus 311 ~~~~~nl~~~l~~g~~~~~Vn~ 332 (416)
T 3k5p_A 311 TEVTRKLVEYSDVGSTVGAVNF 332 (416)
T ss_dssp HHHHHHHHHHHHHCCCTTBSSS
T ss_pred HHHHHHHHHHHhhCCCCceeeC
Confidence 999999999997665555 443
No 17
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=99.97 E-value=1.6e-31 Score=197.00 Aligned_cols=96 Identities=31% Similarity=0.437 Sum_probs=89.0
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCC--CCC-------C----ccccC-CceEeccCCCC
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPF--DPN-------D----PILKF-QSVLITPHVGG 66 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~--~~~-------~----~l~~~-~nvi~TPH~a~ 66 (99)
|++||+|++|||+|||++||++||+++|++|+|+||+||||++||+ +.+ + |||++ |||++|||+||
T Consensus 221 l~~mk~ga~lin~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~~L~~~~~nvilTPHia~ 300 (331)
T 1xdw_A 221 LKKMKDGAILVNCARGQLVDTEAVIEAVESGKLGGYGCDVLDGEASVFGKDLEGQKLENPLFEKLVDLYPRVLITPHLGS 300 (331)
T ss_dssp HHTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTGGGTTTCCCTTSCCSSHHHHHHHHTTTTEEECCSCTT
T ss_pred HhhCCCCcEEEECCCcccccHHHHHHHHHhCCceEEEEecCCCCCCcccccccccccCccchHHHHhCCCCEEEcCcccc
Confidence 4689999999999999999999999999999999999999999994 332 3 79999 99999999999
Q ss_pred CcHHHHHHHHHHHHHHHHHHHcCCCCCccc
Q 045269 67 VTEHSYRSTAKVVGDVALQLHAGTPLTGIE 96 (99)
Q Consensus 67 ~t~~~~~~~~~~~~~~l~~~~~g~~~~~~~ 96 (99)
+|.+++.++.+.+++|+.+|++|+++.+++
T Consensus 301 ~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v 330 (331)
T 1xdw_A 301 YTDEAVKNMVEVSYQNLKDLAETGDCPNKI 330 (331)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHSCCTTBC
T ss_pred ChHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 999999999999999999999999887754
No 18
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=99.97 E-value=3.2e-31 Score=200.09 Aligned_cols=96 Identities=32% Similarity=0.472 Sum_probs=83.0
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCC----CCccccCCceEeccCCCCCcHHHHHHHH
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDP----NDPILKFQSVLITPHVGGVTEHSYRSTA 76 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~----~~~l~~~~nvi~TPH~a~~t~~~~~~~~ 76 (99)
|++||+|++|||+|||++||++||.++|++|+++||++|||+.||++. ++|||++|||++|||+||+|.|++.+++
T Consensus 220 l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i~gA~lDVf~~EP~~~~~~~~~pL~~~~nvilTPHi~~~T~ea~~~~~ 299 (404)
T 1sc6_A 220 ISLMKPGSLLINASRGTVVDIPALADALASKHLAGAAIDVFPTEPATNSDPFTSPLAEFDNVLLTPHIGGSTQEAQENIG 299 (404)
T ss_dssp HHHSCTTEEEEECSCSSSBCHHHHHHHHHTTSEEEEEEEC---------CTTTGGGTTCTTEEEECCCSCCSHHHHHHHH
T ss_pred HhhcCCCeEEEECCCChHHhHHHHHHHHHcCCccEEEEeecCCCCCCccccccchhhcCCCEEECCCCCCCcHHHHHHHH
Confidence 467999999999999999999999999999999999999999999864 5799999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCccc
Q 045269 77 KVVGDVALQLHAGTPLTGIE 96 (99)
Q Consensus 77 ~~~~~~l~~~~~g~~~~~~~ 96 (99)
..+++|+.+|++|+++.+.+
T Consensus 300 ~~~~~nl~~~l~g~~~~~~v 319 (404)
T 1sc6_A 300 LEVAGKLIKYSDNGSTLSAV 319 (404)
T ss_dssp HHHHHHHHHHHHHCCCTTBS
T ss_pred HHHHHHHHHHHcCCCCccee
Confidence 99999999999988776643
No 19
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=99.97 E-value=1.4e-31 Score=197.48 Aligned_cols=96 Identities=21% Similarity=0.288 Sum_probs=88.7
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCC--C--------CC---CccccCCceEeccCCCCC
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPF--D--------PN---DPILKFQSVLITPHVGGV 67 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~--~--------~~---~~l~~~~nvi~TPH~a~~ 67 (99)
|++||+|++|||+|||++||++||+++|++|+|+||+||||++||+ + ++ +|||++|||++|||+||+
T Consensus 220 l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~pL~~~~nvi~TPHia~~ 299 (333)
T 1dxy_A 220 FNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDTYEYETEDLLNLAKHGSFKDPLWDELLGMPNVVLSPHIAYY 299 (333)
T ss_dssp HHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEESSCTTHHHHHHHHHHHSSCCCHHHHHHHTCTTEEECSSCTTC
T ss_pred HhhCCCCcEEEECCCCcccCHHHHHHHHHhCCccEEEEecCCCCCCcccccccccccCccchhHHhcCCCEEECCccccC
Confidence 3579999999999999999999999999999999999999999983 1 12 589999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHcCCCCCccc
Q 045269 68 TEHSYRSTAKVVGDVALQLHAGTPLTGIE 96 (99)
Q Consensus 68 t~~~~~~~~~~~~~~l~~~~~g~~~~~~~ 96 (99)
|.+++.++.+.+++|+.+|++|+++.+++
T Consensus 300 t~e~~~~~~~~~~~nl~~~~~g~~~~~~v 328 (333)
T 1dxy_A 300 TETAVHNMVYFSLQHLVDFLTKGETSTEV 328 (333)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHSCCTTEE
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCCCCcee
Confidence 99999999999999999999999888754
No 20
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=99.96 E-value=3.8e-30 Score=187.89 Aligned_cols=96 Identities=20% Similarity=0.248 Sum_probs=91.7
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecC-CCCCCCCCCccccCCceEeccCCCCC--cHHHHHHHHH
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVA-WTEPFDPNDPILKFQSVLITPHVGGV--TEHSYRSTAK 77 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~-~~Ep~~~~~~l~~~~nvi~TPH~a~~--t~~~~~~~~~ 77 (99)
|++||+|++|||+|||+++|+++|.++|++|++.||++||| ++||++.++|||++||+++|||+||+ |.+++.++.+
T Consensus 197 l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~gA~lDv~~~~ep~~~~~~L~~~~nviltPH~~~~~~t~e~~~~~~~ 276 (303)
T 1qp8_A 197 LALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVWWGRNDFAKDAEFFSLPNVVATPWVAGGYGNERVWRQMVM 276 (303)
T ss_dssp HTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTCCGGGHHHHTSTTEEECCSCSSSSSCHHHHHHHHH
T ss_pred HhhCCCCCEEEECCCCcccCHHHHHHHHHhCCceEEEeccCCCCCCCCCCChhhcCCCEEECCCcCCCCCCHHHHHHHHH
Confidence 46899999999999999999999999999999999999999 88998889999999999999999998 9999999999
Q ss_pred HHHHHHHHHHcCCCCCccc
Q 045269 78 VVGDVALQLHAGTPLTGIE 96 (99)
Q Consensus 78 ~~~~~l~~~~~g~~~~~~~ 96 (99)
.+++|+.+|++|+++.+.+
T Consensus 277 ~~~~nl~~~~~g~~~~~~v 295 (303)
T 1qp8_A 277 EAVRNLITYATGGRPRNIA 295 (303)
T ss_dssp HHHHHHHHHHTTSCCSCBC
T ss_pred HHHHHHHHHHcCCCCCcee
Confidence 9999999999999887754
No 21
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=99.96 E-value=1.3e-29 Score=185.46 Aligned_cols=95 Identities=32% Similarity=0.506 Sum_probs=91.7
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCCccccCCceEeccCCCCCcHHHHHHHHHHHH
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPNDPILKFQSVLITPHVGGVTEHSYRSTAKVVG 80 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~~~~~~~~~ 80 (99)
|++||+|+++||+|||+++|+++|.++|+ |++.||++|||+.||++.++|||++||+++|||+|++|.+++.++.+.++
T Consensus 216 l~~mk~ga~lin~srg~~vd~~aL~~aL~-g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~~~~~~~~~~~ 294 (311)
T 2cuk_A 216 LFAMKRGAILLNTARGALVDTEALVEALR-GHLFGAGLDVTDPEPLPPGHPLYALPNAVITPHIGSAGRTTRERMAEVAV 294 (311)
T ss_dssp HTTSCTTCEEEECSCGGGBCHHHHHHHHT-TTSSEEEESSCSSSSCCTTSGGGGCTTEEECCSCTTCBHHHHHHHHHHHH
T ss_pred HhhCCCCcEEEECCCCCccCHHHHHHHHh-CcCCEEEEeeCCCCCCCCCChhhhCCCEEECCcCCCCCHHHHHHHHHHHH
Confidence 46899999999999999999999999999 99999999999999998999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCccc
Q 045269 81 DVALQLHAGTPLTGIE 96 (99)
Q Consensus 81 ~~l~~~~~g~~~~~~~ 96 (99)
+|+.+|++|+++.+++
T Consensus 295 ~nl~~~~~g~~~~~~v 310 (311)
T 2cuk_A 295 ENLLAVLEGREPPNPV 310 (311)
T ss_dssp HHHHHHHTTCCCSSBC
T ss_pred HHHHHHHcCCCCCCcc
Confidence 9999999999988865
No 22
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=99.96 E-value=4.3e-30 Score=189.95 Aligned_cols=93 Identities=27% Similarity=0.451 Sum_probs=83.7
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCCccccCCceEeccCCCCCcHHHHHHHHHHHH
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPNDPILKFQSVLITPHVGGVTEHSYRSTAKVVG 80 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~~~~~~~~~ 80 (99)
|++||+|++|||+|||++||+++|.++|++|++.||++|||+.|| +.++|||++|||++|||+|++|.+++.++.+.++
T Consensus 242 l~~mk~gailIN~arg~vvd~~aL~~aL~~g~i~gA~lDV~~~EP-~~~~~L~~~~nvilTPH~~~~t~e~~~~~~~~~~ 320 (335)
T 2g76_A 242 FAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEP-PRDRALVDHENVISCPHLGASTKEAQSRCGEEIA 320 (335)
T ss_dssp HTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSS-CSCCHHHHSTTEEECSSCTTCBHHHHHHHHHHHH
T ss_pred HhhCCCCcEEEECCCccccCHHHHHHHHHhCCccEEEEeecCCCC-CCCchHHhCCCEEECCcCCCCCHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999 5789999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCc
Q 045269 81 DVALQLHAGTPLTG 94 (99)
Q Consensus 81 ~~l~~~~~g~~~~~ 94 (99)
+|+.+|++|+++.|
T Consensus 321 ~nl~~~~~g~~~~n 334 (335)
T 2g76_A 321 VQFVDMVKGKSLTG 334 (335)
T ss_dssp HHHHHHC-------
T ss_pred HHHHHHHcCCCCCC
Confidence 99999999998876
No 23
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=99.96 E-value=4.7e-29 Score=185.13 Aligned_cols=99 Identities=27% Similarity=0.405 Sum_probs=91.5
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCC-CCCccccCCceEeccCCCCCcHHHHHHHHHHH
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFD-PNDPILKFQSVLITPHVGGVTEHSYRSTAKVV 79 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~-~~~~l~~~~nvi~TPH~a~~t~~~~~~~~~~~ 79 (99)
|++||+|++|||+|||+++|+++|.++|++|++.||++|||+.||++ .++||+.+|||++|||+|++|+++..++.+.+
T Consensus 246 l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~L~~~~nvi~tPHia~~t~~~~~~~~~~~ 325 (347)
T 1mx3_A 246 VKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWYSEQASIEMREEA 325 (347)
T ss_dssp HTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTSSTTTTCSSEEECSSCTTCCHHHHHHHHHHH
T ss_pred HhcCCCCCEEEECCCChHHhHHHHHHHHHhCCCcEEEEeecccCCCCCCCchHHhCCCEEEEchHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999986 47899999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCc-ccccC
Q 045269 80 GDVALQLHAGTPLTG-IEPVN 99 (99)
Q Consensus 80 ~~~l~~~~~g~~~~~-~~~~n 99 (99)
++|+.+|++|+++.+ .++||
T Consensus 326 ~~ni~~~~~g~~~~~l~~~v~ 346 (347)
T 1mx3_A 326 AREIRRAITGRIPDSLKNCVN 346 (347)
T ss_dssp HHHHHHHHHSCTTTTCSSBCC
T ss_pred HHHHHHHHcCCCCcccCCCCC
Confidence 999999999987653 34444
No 24
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=99.96 E-value=3.7e-29 Score=182.78 Aligned_cols=89 Identities=29% Similarity=0.549 Sum_probs=86.2
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCCccccCCceEeccCCCCCcHHHHHHHHHHHH
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPNDPILKFQSVLITPHVGGVTEHSYRSTAKVVG 80 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~~~~~~~~~ 80 (99)
|++||+|++|||+|||++||+++|.++|++|++.||++|||+.||++.++|||++||+++|||+|++|.+++.++.+.++
T Consensus 219 l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~~~~~~~~~~~ 298 (307)
T 1wwk_A 219 LKLMKKTAILINTSRGPVVDTNALVKALKEGWIAGAGLDVFEEEPLPKDHPLTKFDNVVLTPHIGASTVEAQERAGVEVA 298 (307)
T ss_dssp HHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECSSCTTCBHHHHHHHHHHHH
T ss_pred HhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCcEEEEecCCCCCCCCCChHHhCCCEEECCccccCcHHHHHHHHHHHH
Confidence 35799999999999999999999999999999999999999999998999999999999999999999999999999999
Q ss_pred HHHHHHHcC
Q 045269 81 DVALQLHAG 89 (99)
Q Consensus 81 ~~l~~~~~g 89 (99)
+|+.+|++|
T Consensus 299 ~nl~~~~~g 307 (307)
T 1wwk_A 299 EKVVKILKG 307 (307)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHcC
Confidence 999999976
No 25
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=99.95 E-value=3.8e-29 Score=181.95 Aligned_cols=88 Identities=16% Similarity=0.267 Sum_probs=82.8
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCCccccCCceEeccCCC-CCcHHHHHHHHHHH
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPNDPILKFQSVLITPHVG-GVTEHSYRSTAKVV 79 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~~l~~~~nvi~TPH~a-~~t~~~~~~~~~~~ 79 (99)
|++||+|++|||+|||+++|++||+++|++|++.||++|||+.||+ +|||++|||++|||+| ++|.++..++.+.+
T Consensus 196 l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~EP~---~pL~~~~nvilTPHiag~~t~e~~~~~~~~~ 272 (290)
T 3gvx_A 196 LANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLSDVWWNEPE---ITETNLRNAILSPHVAGGMSGEIMDIAIQLA 272 (290)
T ss_dssp HTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTS---CCSCCCSSEEECCSCSSCBTTBCCHHHHHHH
T ss_pred HhhhhcCceEEEeehhcccCCcchhhhhhhccceEEeeccccCCcc---cchhhhhhhhcCccccCCccchHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999996 8999999999999999 89999999999999
Q ss_pred HHHHHHHHcCCC
Q 045269 80 GDVALQLHAGTP 91 (99)
Q Consensus 80 ~~~l~~~~~g~~ 91 (99)
++|+.+|++|+-
T Consensus 273 ~~ni~~~~~~~~ 284 (290)
T 3gvx_A 273 FENVRNFFEGEG 284 (290)
T ss_dssp HHHHHHHTC---
T ss_pred HHHHHhhhcCCC
Confidence 999999999864
No 26
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=99.95 E-value=2.3e-28 Score=179.47 Aligned_cols=92 Identities=25% Similarity=0.394 Sum_probs=88.5
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCCccccCCceEeccCCCCCcHHHHHHHHHHHH
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPNDPILKFQSVLITPHVGGVTEHSYRSTAKVVG 80 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~~~~~~~~~ 80 (99)
|++||+|++|||+|||++||+++|.++|++|++.||++|||+.|| +.++|||++||+++|||+|++|.+++.++.+.+
T Consensus 225 l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~gA~lDv~~~eP-~~~~~L~~~~nviltPH~~~~t~~~~~~~~~~~- 302 (320)
T 1gdh_A 225 IKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDVFAGEP-NINEGYYDLPNTFLFPHIGSAATQAREDMAHQA- 302 (320)
T ss_dssp HTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTT-SCCTTGGGCTTEEECSSCTTCBHHHHHHHHHHH-
T ss_pred HhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCcEEEEeCCCCCC-CCCChhhhCCCEEECCcCCcCcHHHHHHHHHHH-
Confidence 468999999999999999999999999999999999999999999 789999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCc
Q 045269 81 DVALQLHAGTPLTG 94 (99)
Q Consensus 81 ~~l~~~~~g~~~~~ 94 (99)
+|+.+|++|+++..
T Consensus 303 ~nl~~~~~g~~~~~ 316 (320)
T 1gdh_A 303 NDLIDALFGGADMS 316 (320)
T ss_dssp HHHHHHHHTTSCCT
T ss_pred HHHHHHHcCCCCcc
Confidence 99999999998755
No 27
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=99.95 E-value=4.7e-29 Score=182.62 Aligned_cols=90 Identities=22% Similarity=0.394 Sum_probs=86.8
Q ss_pred CCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCC---ccccCCceEeccCCCCCcHHHHHHHHHH
Q 045269 2 SDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPND---PILKFQSVLITPHVGGVTEHSYRSTAKV 78 (99)
Q Consensus 2 ~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~---~l~~~~nvi~TPH~a~~t~~~~~~~~~~ 78 (99)
++||+|++|||+|||+++|+++|.++|++|++.||++|||+.||++ ++ |||++|||++|||+|++|.++..++.+.
T Consensus 220 ~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~-~~~~~~L~~~~nviltPH~~~~t~~~~~~~~~~ 298 (313)
T 2ekl_A 220 ELMKDNVIIVNTSRAVAVNGKALLDYIKKGKVYAYATDVFWNEPPK-EEWELELLKHERVIVTTHIGAQTKEAQKRVAEM 298 (313)
T ss_dssp HHSCTTEEEEESSCGGGBCHHHHHHHHHTTCEEEEEESCCSSSSCC-SHHHHHHHHSTTEEECCSCTTCSHHHHHHHHHH
T ss_pred hcCCCCCEEEECCCCcccCHHHHHHHHHcCCCcEEEEecCCCCCCC-CcccchHhhCCCEEECCccCcCcHHHHHHHHHH
Confidence 5799999999999999999999999999999999999999999986 66 9999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCC
Q 045269 79 VGDVALQLHAGTPL 92 (99)
Q Consensus 79 ~~~~l~~~~~g~~~ 92 (99)
+++|+.+|++|+++
T Consensus 299 ~~~n~~~~~~g~~l 312 (313)
T 2ekl_A 299 TTQNLLNAMKELGM 312 (313)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCC
Confidence 99999999999886
No 28
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=99.95 E-value=3.6e-28 Score=179.47 Aligned_cols=94 Identities=31% Similarity=0.436 Sum_probs=89.6
Q ss_pred CCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCCccccCCceEeccCCCCCcHHHHHHHHHHHHH
Q 045269 2 SDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPNDPILKFQSVLITPHVGGVTEHSYRSTAKVVGD 81 (99)
Q Consensus 2 ~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~~~~~~~~~~ 81 (99)
+.||+|++|||+|||.++|+++|.++|++|+++||++|||+.||++. +|||.+|||++|||+|+.|.++..++.+.+++
T Consensus 239 ~~mk~gailIn~srG~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~-~~L~~~~nviltPH~~~~t~e~~~~~~~~~~~ 317 (333)
T 3ba1_A 239 DALGPKGVLINIGRGPHVDEPELVSALVEGRLGGAGLDVFEREPEVP-EKLFGLENVVLLPHVGSGTVETRKVMADLVVG 317 (333)
T ss_dssp HHHCTTCEEEECSCGGGBCHHHHHHHHHHTSSCEEEESCCTTTTCCC-GGGGGCTTEEECSSCTTCSHHHHHHHHHHHHH
T ss_pred hcCCCCCEEEECCCCchhCHHHHHHHHHcCCCeEEEEecCCCCCCCc-chhhcCCCEEECCcCCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999755 99999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCccc
Q 045269 82 VALQLHAGTPLTGIE 96 (99)
Q Consensus 82 ~l~~~~~g~~~~~~~ 96 (99)
|+.+|++|+++.+.+
T Consensus 318 nl~~~~~g~~~~~~V 332 (333)
T 3ba1_A 318 NLEAHFSGKPLLTPV 332 (333)
T ss_dssp HHHHHHHTCCCSSBC
T ss_pred HHHHHHcCCCCCCCC
Confidence 999999999988754
No 29
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=99.95 E-value=1.4e-28 Score=184.62 Aligned_cols=90 Identities=22% Similarity=0.195 Sum_probs=83.4
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCCccccCCceEeccCCCCCcHHHHHHHHHHHH
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPNDPILKFQSVLITPHVGGVTEHSYRSTAKVVG 80 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~~~~~~~~~ 80 (99)
|++||+|++|||+|||++||++||+++|++|++.||+||||++||++ +++||.++ +++|||+||+|.|+..++...++
T Consensus 197 l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDV~e~EP~~-~~~L~~~~-~i~TPHiag~t~e~~~~~~~~~~ 274 (381)
T 3oet_A 197 IRRLKPGAILINACRGPVVDNAALLARLNAGQPLSVVLDVWEGEPDL-NVALLEAV-DIGTSHIAGYTLEGKARGTTQVF 274 (381)
T ss_dssp HHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSC-CHHHHHHS-SEECSSCTTCCHHHHHHHHHHHH
T ss_pred HhcCCCCcEEEECCCCcccCHHHHHHHHHhCCCeEEEeeccccCCCC-cchhhhCC-EEECCccCcCcHHHHHHHHHHHH
Confidence 45799999999999999999999999999999999999999999974 56788875 89999999999999999999999
Q ss_pred HHHHHHHcCCCC
Q 045269 81 DVALQLHAGTPL 92 (99)
Q Consensus 81 ~~l~~~~~g~~~ 92 (99)
+++.+|+++.+-
T Consensus 275 ~~l~~~l~~~~~ 286 (381)
T 3oet_A 275 EAYSAFIGREQR 286 (381)
T ss_dssp HHHHHHTTCCCC
T ss_pred HHHHHHHcCCcc
Confidence 999999988543
No 30
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=99.95 E-value=1.1e-27 Score=179.68 Aligned_cols=92 Identities=21% Similarity=0.267 Sum_probs=85.5
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCCccccCCceEeccCCCCCcHHHHHHHHHHHH
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPNDPILKFQSVLITPHVGGVTEHSYRSTAKVVG 80 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~~~~~~~~~ 80 (99)
|++||+|++|||+|||++||++||+++|++|++.||+||||++||. ++++|+. +||++|||+||+|.++..++.+.++
T Consensus 194 l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~i~~A~LDV~~~EP~-~~~~l~~-~nvi~TPHiag~t~e~~~~~~~~~~ 271 (380)
T 2o4c_A 194 LAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEVALDVWEGEPQ-ADPELAA-RCLIATPHIAGYSLEGKLRGTAQIY 271 (380)
T ss_dssp HHTSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTS-CCHHHHT-TCSEECSSCTTCCHHHHHHHHHHHH
T ss_pred HhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCceEEeeeeccCCC-Cchhhcc-CCEEEccccCcCCHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999999999999995 5677887 5999999999999999999999999
Q ss_pred HHHHHHHcCCCCCc
Q 045269 81 DVALQLHAGTPLTG 94 (99)
Q Consensus 81 ~~l~~~~~g~~~~~ 94 (99)
+|+.+|++|++..+
T Consensus 272 ~nl~~~l~g~~~~~ 285 (380)
T 2o4c_A 272 QAYCAWRGIAERVS 285 (380)
T ss_dssp HHHHHHHTCCCCCC
T ss_pred HHHHHHHcCCCccc
Confidence 99999999986544
No 31
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=99.94 E-value=3e-27 Score=173.81 Aligned_cols=95 Identities=25% Similarity=0.498 Sum_probs=91.6
Q ss_pred CCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCCccccCCceEeccCCCCCcHHHHHHHHHHHHH
Q 045269 2 SDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPNDPILKFQSVLITPHVGGVTEHSYRSTAKVVGD 81 (99)
Q Consensus 2 ~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~~~~~~~~~~ 81 (99)
+.||+|++|||+|||.++|+++|.++|++|++.|+++|||++||++.++|||.++||++|||+|+.|.++..++.+.+++
T Consensus 234 ~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~epl~~~~~l~~~~nvi~tPh~~~~t~~~~~~~~~~~~~ 313 (330)
T 2gcg_A 234 QKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRTRNTMSLLAAN 313 (330)
T ss_dssp HHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECCSCTTCBHHHHHHHHHHHHH
T ss_pred hcCCCCcEEEECCCCcccCHHHHHHHHHcCCccEEEeCCCCCCCCCCCChhhcCCCEEECCCCCCCcHHHHHHHHHHHHH
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCccc
Q 045269 82 VALQLHAGTPLTGIE 96 (99)
Q Consensus 82 ~l~~~~~g~~~~~~~ 96 (99)
|+.+|++|+++.+.+
T Consensus 314 n~~~~~~g~~~~~~v 328 (330)
T 2gcg_A 314 NLLAGLRGEPMPSEL 328 (330)
T ss_dssp HHHHHHHTCCCTTEE
T ss_pred HHHHHHcCCCCCCCC
Confidence 999999999988754
No 32
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=99.94 E-value=2e-27 Score=176.14 Aligned_cols=94 Identities=23% Similarity=0.323 Sum_probs=89.3
Q ss_pred CCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCCccccCCceEeccCCCCCcHHHHHHHHHHHHH
Q 045269 2 SDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPNDPILKFQSVLITPHVGGVTEHSYRSTAKVVGD 81 (99)
Q Consensus 2 ~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~~~~~~~~~~ 81 (99)
++||+|++|||+|||+++|+++|.++|++|++.||++|||++|| +.++||+.+|||++|||+|+.|.++..++.+.+++
T Consensus 244 ~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP-~~~~~L~~~~nviltPH~~~~t~e~~~~~~~~~~~ 322 (348)
T 2w2k_A 244 AAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEFEP-QVSKELIEMKHVTLTTHIGGVAIETFHEFERLTMT 322 (348)
T ss_dssp HHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTTTT-SCCHHHHTSSSEEECCSCTTCSHHHHHHHHHHHHH
T ss_pred hcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCCCC-CCCchhhcCCCEEEcCcCCCCCHHHHHHHHHHHHH
Confidence 56999999999999999999999999999999999999999999 67789999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCccc
Q 045269 82 VALQLHAGTPLTGIE 96 (99)
Q Consensus 82 ~l~~~~~g~~~~~~~ 96 (99)
|+.+|++|+++.+.+
T Consensus 323 ni~~~~~g~~~~~~v 337 (348)
T 2w2k_A 323 NIDRFLLQGKPLLTP 337 (348)
T ss_dssp HHHHHHHTCCCCSSB
T ss_pred HHHHHHcCCCCccee
Confidence 999999998877654
No 33
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=99.94 E-value=5.4e-27 Score=172.90 Aligned_cols=93 Identities=26% Similarity=0.398 Sum_probs=89.0
Q ss_pred CCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCCccccCC-ceEeccCCCCCcHHHHHHHHHHHH
Q 045269 2 SDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPNDPILKFQ-SVLITPHVGGVTEHSYRSTAKVVG 80 (99)
Q Consensus 2 ~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~~l~~~~-nvi~TPH~a~~t~~~~~~~~~~~~ 80 (99)
+.||+| +|||+|||.++|+++|.++|++|++.||++|||++||++ ++||+.+| ||++|||+|+.|.++..++.+.++
T Consensus 224 ~~mk~g-ilin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP~~-~~~L~~~~~nviltPh~~~~t~~~~~~~~~~~~ 301 (333)
T 2d0i_A 224 KKLEGK-YLVNIGRGALVDEKAVTEAIKQGKLKGYATDVFEKEPVR-EHELFKYEWETVLTPHYAGLALEAQEDVGFRAV 301 (333)
T ss_dssp HHTBTC-EEEECSCGGGBCHHHHHHHHHTTCBCEEEESCCSSSSCS-CCGGGGCTTTEEECCSCTTCCHHHHHHHHHHHH
T ss_pred hhCCCC-EEEECCCCcccCHHHHHHHHHcCCceEEEecCCCCCCCC-CchHHcCCCCEEEcCccCCCcHHHHHHHHHHHH
Confidence 469999 999999999999999999999999999999999999987 89999999 999999999999999999999999
Q ss_pred HHHHHHHcCCCCCccc
Q 045269 81 DVALQLHAGTPLTGIE 96 (99)
Q Consensus 81 ~~l~~~~~g~~~~~~~ 96 (99)
+|+.+|++|+++.+.+
T Consensus 302 ~n~~~~~~g~~~~~~v 317 (333)
T 2d0i_A 302 ENLLKVLRGEVPEDLV 317 (333)
T ss_dssp HHHHHHHTTCCCTTBS
T ss_pred HHHHHHHcCCCCcCcc
Confidence 9999999999887754
No 34
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=99.94 E-value=3.3e-27 Score=173.96 Aligned_cols=94 Identities=28% Similarity=0.473 Sum_probs=90.2
Q ss_pred CCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCCccccCCceEeccCCCCCcHHHHHHHHHHHHH
Q 045269 2 SDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPNDPILKFQSVLITPHVGGVTEHSYRSTAKVVGD 81 (99)
Q Consensus 2 ~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~~~~~~~~~~ 81 (99)
+.||+|++|||+|||.++|+++|.++|++|++.||++|||++|| +.++|||.+|||++|||+|+.|.++..++.+.+++
T Consensus 228 ~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~EP-~~~~~L~~~~~vi~tPh~~~~t~~~~~~~~~~~~~ 306 (334)
T 2dbq_A 228 KLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEP-YYNEELFKLDNVVLTPHIGSASFGAREGMAELVAK 306 (334)
T ss_dssp HHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSS-CCCHHHHHCTTEEECSSCTTCSHHHHHHHHHHHHH
T ss_pred hcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEecCCCCCC-CCCchhhcCCCEEECCccCCCcHHHHHHHHHHHHH
Confidence 46999999999999999999999999999999999999999999 78899999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCccc
Q 045269 82 VALQLHAGTPLTGIE 96 (99)
Q Consensus 82 ~l~~~~~g~~~~~~~ 96 (99)
|+.+|++|+++.+++
T Consensus 307 n~~~~~~g~~~~~~v 321 (334)
T 2dbq_A 307 NLIAFKRGEIPPTLV 321 (334)
T ss_dssp HHHHHHTTCCCTTBS
T ss_pred HHHHHHcCCCCcccc
Confidence 999999999888754
No 35
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=99.91 E-value=2.4e-24 Score=166.67 Aligned_cols=95 Identities=29% Similarity=0.489 Sum_probs=90.3
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCCccccCCceEeccCCCCCcHHHHHHHHHHHH
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPNDPILKFQSVLITPHVGGVTEHSYRSTAKVVG 80 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~~~~~~~~~ 80 (99)
|++||+|+++||+|||+++|+++|.++|++|++.||++|||+.||+ .++|||+++|+++|||++|.|.+++.++...++
T Consensus 219 ~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i~ga~lDv~~~eP~-~~~~L~~~~~vilTPh~~~~t~ea~~~~~~~~~ 297 (529)
T 1ygy_A 219 LAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPC-TDSPLFELAQVVVTPHLGASTAEAQDRAGTDVA 297 (529)
T ss_dssp HTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSC-SCCGGGGCTTEEECSSCSSCBHHHHHHHHHHHH
T ss_pred HhCCCCCCEEEECCCCchhhHHHHHHHHHcCCccEEEEeeccCCCC-CCchHHhCCCEEEccccCCCCHHHHHHHHHHHH
Confidence 3689999999999999999999999999999999999999999996 789999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCccc
Q 045269 81 DVALQLHAGTPLTGIE 96 (99)
Q Consensus 81 ~~l~~~~~g~~~~~~~ 96 (99)
+++.+|++|+++.+.+
T Consensus 298 ~~l~~~l~~~~~~~~v 313 (529)
T 1ygy_A 298 ESVRLALAGEFVPDAV 313 (529)
T ss_dssp HHHHHHHTTCCCTTBC
T ss_pred HHHHHHHcCCCCCccc
Confidence 9999999999877654
No 36
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=99.72 E-value=7.4e-19 Score=135.08 Aligned_cols=90 Identities=8% Similarity=-0.027 Sum_probs=80.6
Q ss_pred CCCCCCCcEEEEccCCcc-cCHHHHHH--HHHhCCcceEEEecCCCCCCCCCCccccC--CceEeccCCC-CCcHH-HHH
Q 045269 1 MSDVCTSSLLVNIVRGGL-LDYEAVAH--YLESGHLGGLGLDVAWTEPFDPNDPILKF--QSVLITPHVG-GVTEH-SYR 73 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~l-vd~~aL~~--aL~~g~i~gaalDV~~~Ep~~~~~~l~~~--~nvi~TPH~a-~~t~~-~~~ 73 (99)
|++||+|++|||+|||++ ||+++|.+ +|++|+|+ +++||| |++.++|+|.+ ||+++| |+| |.+.+ ...
T Consensus 331 l~~MK~gailiNvgrg~~EId~~aL~~~~AL~~g~I~-a~lDv~---plp~~~~l~~l~~~nvv~t-H~atghp~e~~~~ 405 (479)
T 1v8b_A 331 LLKMKNNAVVGNIGHFDDEIQVNELFNYKGIHIENVK-PQVDRI---TLPNGNKIIVLARGRLLNL-GCATGHPAFVMSF 405 (479)
T ss_dssp HTTCCTTCEEEECSSTTTSBCHHHHHTSTTCEEEEEE-TTEEEE---ECTTSCEEEEEGGGSBHHH-HSSCCSCHHHHHH
T ss_pred HhhcCCCcEEEEeCCCCccccchhhhccccceeeeEe-eeEEEE---ECCCCCeeeEecCCCEEEE-eccCCCCchhHHH
Confidence 478999999999999999 99999999 99999998 999998 44558899998 999999 999 67766 677
Q ss_pred HHHHHHHHHHHHHHcCC--CCCcc
Q 045269 74 STAKVVGDVALQLHAGT--PLTGI 95 (99)
Q Consensus 74 ~~~~~~~~~l~~~~~g~--~~~~~ 95 (99)
++...+++|+..|++|+ ++.+.
T Consensus 406 s~a~~~~~ni~~~~~g~~~~l~n~ 429 (479)
T 1v8b_A 406 SFCNQTFAQLDLWQNKDTNKYENK 429 (479)
T ss_dssp HHHHHHHHHHHHHHTTTSSSCCSS
T ss_pred HHHHHHHHHHHHHHcCCCCcCCcc
Confidence 88889999999999998 88774
No 37
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=99.71 E-value=2.1e-19 Score=138.49 Aligned_cols=90 Identities=10% Similarity=0.049 Sum_probs=78.2
Q ss_pred CCCCCCCcEEEEccCCcc-cCHHHHHHHHHhCCcceEEEecCCCCCCCCCCccccC--CceEeccCCC-CCcHH-HHHHH
Q 045269 1 MSDVCTSSLLVNIVRGGL-LDYEAVAHYLESGHLGGLGLDVAWTEPFDPNDPILKF--QSVLITPHVG-GVTEH-SYRST 75 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~l-vd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~~l~~~--~nvi~TPH~a-~~t~~-~~~~~ 75 (99)
|++||+|++|||+|||++ ||+++| ++|++|+|+ +++|+ +|++.++|||.+ |||++| |+| |.|.+ ...++
T Consensus 351 l~~MK~gAilINvgrg~veID~~aL-~AL~~g~I~-~~~Dv---~plp~~~pL~~l~~~nvv~t-H~atg~~~~~~~~~~ 424 (494)
T 3d64_A 351 MKAMRHNAIVCNIGHFDSEIDVAST-RQYQWENIK-PQVDH---IIFPDGKRVILLAEGRLVNL-GCATGHPSFVMSNSF 424 (494)
T ss_dssp HHHCCTTEEEEECSSSSCSBCCGGG-TTSEEEEEE-TTEEE---EECTTSCEEEEEGGGSBHHH-HTSCCSCHHHHHHHH
T ss_pred HhhCCCCcEEEEcCCCcchhchHHH-HhhhcCccc-eeEEE---EECCCCCchhhcCCCCEEEE-eCcCCCCHHHHHHHH
Confidence 367999999999999999 699999 999999987 45554 577778999999 999999 999 66755 77888
Q ss_pred HHHHHHHHHHHHcCCCCCccc
Q 045269 76 AKVVGDVALQLHAGTPLTGIE 96 (99)
Q Consensus 76 ~~~~~~~l~~~~~g~~~~~~~ 96 (99)
...+++|+..|++|+++.+.|
T Consensus 425 a~~~~~ni~~~~~g~~~~n~V 445 (494)
T 3d64_A 425 TNQTLAQIELFTRGGEYANKV 445 (494)
T ss_dssp HHHHHHHHHHHHHGGGSCSSE
T ss_pred HHHHHHHHHHHHcCCCCCCce
Confidence 899999999999999888754
No 38
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=99.36 E-value=1.3e-14 Score=110.03 Aligned_cols=79 Identities=15% Similarity=0.207 Sum_probs=67.6
Q ss_pred CCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCC-CccccCCceEeccCC----C-----------
Q 045269 2 SDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPN-DPILKFQSVLITPHV----G----------- 65 (99)
Q Consensus 2 ~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~-~~l~~~~nvi~TPH~----a----------- 65 (99)
..||. .+|||+|||.+||+++ +++|+++.|.+++ +||++++ ++++..+||++|||+ |
T Consensus 285 ~~mk~-dilIn~ArG~~Vde~a-~~aL~~~~I~~aA-----neP~t~~a~~ll~~~~V~itPhiaaNaGGvt~s~~E~~q 357 (419)
T 1gtm_A 285 LELEV-DVLAPAAIEEVITKKN-ADNIKAKIVAEVA-----NGPVTPEADEILFEKGILQIPDFLCNAGGVTVSYFEWVQ 357 (419)
T ss_dssp HHSCC-SEEEECSCSCCBCTTG-GGGCCCSEEECCS-----SSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHH
T ss_pred HhCCC-CEEEECCCcccCCHHH-HHHhcCCEEEEee-----CCCCCcchHHHHhcCCEEEECchhhhCCcceeeeehhhh
Confidence 45887 5999999999999999 6999999999888 8997654 689999999999999 5
Q ss_pred ------CCcHHHHHHHHHHHHHHHHHHH
Q 045269 66 ------GVTEHSYRSTAKVVGDVALQLH 87 (99)
Q Consensus 66 ------~~t~~~~~~~~~~~~~~l~~~~ 87 (99)
+.+++...++.+.+.+++.+++
T Consensus 358 n~~~~~w~~~ev~~~l~~~m~~~~~~~~ 385 (419)
T 1gtm_A 358 NITGYYWTIEEVRERLDKKMTKAFYDVY 385 (419)
T ss_dssp HHHCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccCHHHHHHHHHHHHHHHHHHHH
Confidence 5567788888888888888776
No 39
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=99.12 E-value=2.9e-12 Score=98.84 Aligned_cols=90 Identities=13% Similarity=-0.012 Sum_probs=73.7
Q ss_pred CCCCCCcEEEEccCCcc-cCHHHHHH-HHHhCCcceEEEecCCCCCCCCCCc--cccCCceE----eccCCCCCcHHHHH
Q 045269 2 SDVCTSSLLVNIVRGGL-LDYEAVAH-YLESGHLGGLGLDVAWTEPFDPNDP--ILKFQSVL----ITPHVGGVTEHSYR 73 (99)
Q Consensus 2 ~~mk~~ailIN~aRg~l-vd~~aL~~-aL~~g~i~gaalDV~~~Ep~~~~~~--l~~~~nvi----~TPH~a~~t~~~~~ 73 (99)
+.||+|+++||+||+.. ||+++|.+ +|+++++. +++|+|+.++. .++ ++..++++ +|||+++.+.+++
T Consensus 349 ~~mk~ggilvnvG~~~~eId~~aL~~~aL~~~~I~-~~ldv~~~~~~--~~~l~LL~~grlvnL~~~TPH~a~~~~~s~- 424 (494)
T 3ce6_A 349 KAMKDHAILGNIGHFDNEIDMAGLERSGATRVNVK-PQVDLWTFGDT--GRSIIVLSEGRLLNLGNATGHPSFVMSNSF- 424 (494)
T ss_dssp HHSCTTCEEEECSSSGGGBCHHHHHHTTCEEEEEE-TTEEEEECTTT--CCEEEEEGGGSCHHHHHSCCSCHHHHHHHH-
T ss_pred HhcCCCcEEEEeCCCCCccCHHHHHHhhhccceEE-EEEEEeecCCc--chHHHHHhCCCEEeccCCCCCccccchHHH-
Confidence 56999999999999999 99999998 88888887 66798865332 444 66778888 9999998888753
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccc
Q 045269 74 STAKVVGDVALQLHAGTPLTGIEP 97 (99)
Q Consensus 74 ~~~~~~~~~l~~~~~g~~~~~~~~ 97 (99)
...+.+++..|.+|+++.+.+.
T Consensus 425 --~~qa~~ai~~~~~g~~~~~~V~ 446 (494)
T 3ce6_A 425 --ANQTIAQIELWTKNDEYDNEVY 446 (494)
T ss_dssp --HHHHHHHHHHHHTGGGCCSSEE
T ss_pred --HHHHHHHHHHHHcCCCCCCEEE
Confidence 6788999999999887776543
No 40
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=98.38 E-value=5.5e-07 Score=66.85 Aligned_cols=48 Identities=17% Similarity=0.319 Sum_probs=41.1
Q ss_pred CCCCCCCcEEEEcc--CCcccCHHHHHHHHHhCCcceEEEecCCC-CCCCCCCccccCCceE--eccCCCCCcHH
Q 045269 1 MSDVCTSSLLVNIV--RGGLLDYEAVAHYLESGHLGGLGLDVAWT-EPFDPNDPILKFQSVL--ITPHVGGVTEH 70 (99)
Q Consensus 1 l~~mk~~ailIN~a--Rg~lvd~~aL~~aL~~g~i~gaalDV~~~-Ep~~~~~~l~~~~nvi--~TPH~a~~t~~ 70 (99)
++.||+|+++||+| ||+ ||+. ||.+.++|++..++++ +|||+++.+..
T Consensus 255 l~~mk~g~~iV~va~~~Gg----------------------v~e~~ep~~~~~~~~~~~~v~i~~~phl~~~~~~ 307 (377)
T 2vhw_A 255 VAHMKPGAVLVDIAIDQGG----------------------CFEGSRPTTYDHPTFAVHDTLFYCVANMPASVPK 307 (377)
T ss_dssp HTTSCTTCEEEEGGGGTTC----------------------SBTTCCCBCSSSCEEEETTEEEECBTTGGGGSHH
T ss_pred HhcCCCCcEEEEEecCCCC----------------------ccccccCCCCCCCEEEECCEEEEecCCcchhhHH
Confidence 36899999999999 442 6777 8888889999999998 99999998866
No 41
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=97.77 E-value=2.1e-06 Score=63.42 Aligned_cols=75 Identities=16% Similarity=0.255 Sum_probs=43.4
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCCccccCCceE---------eccCCCCC--cH
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPNDPILKFQSVL---------ITPHVGGV--TE 69 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~~l~~~~nvi---------~TPH~a~~--t~ 69 (99)
++.||+|+++||+|-. .| |+ +|++ ||.+.+.|++..+++. .|||.|+. +.
T Consensus 253 l~~mk~gg~iV~v~~~-------------~g---g~-~d~~--ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~ 313 (369)
T 2eez_A 253 LSLMKEGAVIVDVAVD-------------QG---GC-VETI--RPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTN 313 (369)
T ss_dssp HTTSCTTCEEEECC--------------------------------------CEETTEEEECCSCSGGGSHHHHHHHHHH
T ss_pred HHhhcCCCEEEEEecC-------------CC---CC-CCcc--cCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHH
Confidence 3679999999999821 12 44 8988 6766778899999998 88998874 55
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCc
Q 045269 70 HSYRSTAKVVGDVALQLHAGTPLTG 94 (99)
Q Consensus 70 ~~~~~~~~~~~~~l~~~~~g~~~~~ 94 (99)
+....+.+.+.+++..+..++.+.+
T Consensus 314 ~~~~~l~~l~~~g~~~~~~~~~l~~ 338 (369)
T 2eez_A 314 QTLPYVLKLAEKGLDALLEDAALLK 338 (369)
T ss_dssp HHHHHHHHHHHHTTHHHHSCHHHHT
T ss_pred HHHHHHHHHHhcChhhhhcChHHhc
Confidence 6677788777777766766654443
No 42
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=96.69 E-value=0.00084 Score=51.13 Aligned_cols=27 Identities=7% Similarity=0.054 Sum_probs=24.3
Q ss_pred CCCCCCCcEEEEccCCcc-cCHHHHHHH
Q 045269 1 MSDVCTSSLLVNIVRGGL-LDYEAVAHY 27 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~l-vd~~aL~~a 27 (99)
|++||+|++|||+|||.. ||.++|.+.
T Consensus 285 l~~MK~gAIVINvgRg~vEID~~~L~~~ 312 (436)
T 3h9u_A 285 FPRMRDDAIVCNIGHFDTEIQVAWLKAN 312 (436)
T ss_dssp GGGCCTTEEEEECSSSGGGBCHHHHHHH
T ss_pred HhhcCCCcEEEEeCCCCCccCHHHHHhh
Confidence 578999999999999997 999998764
No 43
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=96.59 E-value=0.00024 Score=54.47 Aligned_cols=26 Identities=15% Similarity=0.102 Sum_probs=23.4
Q ss_pred CCCCCCCcEEEEccCCcc-cCHHHHHH
Q 045269 1 MSDVCTSSLLVNIVRGGL-LDYEAVAH 26 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~l-vd~~aL~~ 26 (99)
|++||+|++|||+|||.. ||.++|.+
T Consensus 321 l~~MK~GAILINvGRgdvEID~~aL~~ 347 (464)
T 3n58_A 321 MRKMKDMCIVGNIGHFDNEIQVAALRN 347 (464)
T ss_dssp HHHSCTTEEEEECSSSTTTBTCGGGTT
T ss_pred HhcCCCCeEEEEcCCCCcccCHHHHHh
Confidence 467999999999999998 99998874
No 44
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=96.23 E-value=0.0048 Score=45.91 Aligned_cols=81 Identities=9% Similarity=0.042 Sum_probs=54.3
Q ss_pred cEEEEccCCc-ccCHHHHHH-HHHh--CCcceEEEecCCCCCCCCCCccccCCceEe--ccCCCCCcHHHHH--------
Q 045269 8 SLLVNIVRGG-LLDYEAVAH-YLES--GHLGGLGLDVAWTEPFDPNDPILKFQSVLI--TPHVGGVTEHSYR-------- 73 (99)
Q Consensus 8 ailIN~aRg~-lvd~~aL~~-aL~~--g~i~gaalDV~~~Ep~~~~~~l~~~~nvi~--TPH~a~~t~~~~~-------- 73 (99)
.++..|+-+. +++.+.+.. .++. +. ....+|+.. |.+.+++++++|||.+ +||+++.+.++..
T Consensus 230 vVi~at~~~~~~~~~~~l~~~~lk~r~~~-~~v~vdia~--P~~i~~~l~~l~~v~l~d~d~l~~~~~~~~~~r~~~~~~ 306 (404)
T 1gpj_A 230 VVVSATAAPHPVIHVDDVREALRKRDRRS-PILIIDIAN--PRDVEEGVENIEDVEVRTIDDLRVIARENLERRRKEIPK 306 (404)
T ss_dssp EEEECCSSSSCCBCHHHHHHHHHHCSSCC-CEEEEECCS--SCSBCTTGGGSTTEEEEEHHHHHHHHHHHHHHHHTTHHH
T ss_pred EEEEccCCCCceecHHHHHHHHHhccCCC-CEEEEEccC--CCCCCccccccCCeEEEeHhhHHHHHHHHHHHHHHHHHH
Confidence 3444444443 456666655 4542 22 237889975 6545788999999999 9999998887654
Q ss_pred --HHHHHHHHHHHHHHcCCC
Q 045269 74 --STAKVVGDVALQLHAGTP 91 (99)
Q Consensus 74 --~~~~~~~~~l~~~~~g~~ 91 (99)
.+....++++..|+++.+
T Consensus 307 ~~~li~q~~~~f~~w~~~~~ 326 (404)
T 1gpj_A 307 VEKLIEEELSTVEEELEKLK 326 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 556666777777776543
No 45
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=94.89 E-value=0.0037 Score=47.60 Aligned_cols=25 Identities=12% Similarity=0.282 Sum_probs=21.7
Q ss_pred CCCCCCCcEEEEccCCcc-cCHHHHH
Q 045269 1 MSDVCTSSLLVNIVRGGL-LDYEAVA 25 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~l-vd~~aL~ 25 (99)
|++||+|+++||+|||+. ||.++|.
T Consensus 294 l~~MK~gailINvgrg~~EId~~~L~ 319 (435)
T 3gvp_A 294 LDRMKNSCIVCNMGHSNTEIDVASLR 319 (435)
T ss_dssp HHHSCTTEEEEECSSTTTTBTGGGGC
T ss_pred HHhcCCCcEEEEecCCCccCCHHHHH
Confidence 457999999999999998 8888764
No 46
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=92.61 E-value=0.6 Score=32.18 Aligned_cols=67 Identities=15% Similarity=0.033 Sum_probs=42.5
Q ss_pred CCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCC---CCCCCCccccCCceEeccCCCCCcHHHH
Q 045269 3 DVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTE---PFDPNDPILKFQSVLITPHVGGVTEHSY 72 (99)
Q Consensus 3 ~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~E---p~~~~~~l~~~~nvi~TPH~a~~t~~~~ 72 (99)
.|+++.++++++++.....+.+.+.+.++ ..+ ..-++..| |.....+++.-.+++++||.++. .+..
T Consensus 85 ~l~~~~iv~~~~~~~~~~~~~l~~~l~~~-~v~-~~p~~~~~~~gp~~a~~~l~~g~~~~~~~~~~~~-~~~~ 154 (281)
T 2g5c_A 85 ILSEDATVTDQGSVKGKLVYDLENILGKR-FVG-GHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTD-KKRL 154 (281)
T ss_dssp HSCTTCEEEECCSCCTHHHHHHHHHHGGG-EEC-EEEECCCSCCSGGGCCSSTTTTCEEEECCCSSSC-HHHH
T ss_pred hCCCCcEEEECCCCcHHHHHHHHHhcccc-cee-eccccCCccCChhhhhhHHhCCCCEEEecCCCCC-HHHH
Confidence 47899999999988876667788888654 111 11223222 22234456777789999997653 4433
No 47
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=89.47 E-value=0.14 Score=36.28 Aligned_cols=18 Identities=11% Similarity=0.276 Sum_probs=15.6
Q ss_pred CCCCCCCcEEEEccCCcc
Q 045269 1 MSDVCTSSLLVNIVRGGL 18 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~l 18 (99)
|+.||+|+++||++||..
T Consensus 233 ~~~mk~g~~lin~a~g~~ 250 (300)
T 2rir_A 233 LSSMTPKTLILDLASRPG 250 (300)
T ss_dssp HTTSCTTCEEEECSSTTC
T ss_pred HHhCCCCCEEEEEeCCCC
Confidence 468999999999999854
No 48
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=86.81 E-value=0.14 Score=36.08 Aligned_cols=17 Identities=0% Similarity=0.194 Sum_probs=14.8
Q ss_pred CCCCCCcEEEEccCCcc
Q 045269 2 SDVCTSSLLVNIVRGGL 18 (99)
Q Consensus 2 ~~mk~~ailIN~aRg~l 18 (99)
++||+|+++||++||..
T Consensus 232 ~~mk~~~~lin~ar~~~ 248 (293)
T 3d4o_A 232 AEMPSHTFVIDLASKPG 248 (293)
T ss_dssp HHSCTTCEEEECSSTTC
T ss_pred HhcCCCCEEEEecCCCC
Confidence 56999999999999754
No 49
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=86.34 E-value=1.8 Score=29.81 Aligned_cols=62 Identities=10% Similarity=0.044 Sum_probs=39.5
Q ss_pred CCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEe---cCCC---CCCCCCCccccCCceEeccCCCCC
Q 045269 4 VCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLD---VAWT---EPFDPNDPILKFQSVLITPHVGGV 67 (99)
Q Consensus 4 mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalD---V~~~---Ep~~~~~~l~~~~nvi~TPH~a~~ 67 (99)
++++.++|+++.......+.+.+.+.+..+. .++ ++.. .|......++.-..++++||.++.
T Consensus 91 l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~--~v~~~P~~g~~~~g~~~a~~~l~~g~~~~~~~~~~~~ 158 (290)
T 3b1f_A 91 LKEDVIITDAGSTKYEIVRAAEYYLKDKPVQ--FVGSHPMAGSHKSGAVAANVNLFENAYYIFSPSCLTK 158 (290)
T ss_dssp CCTTCEEECCCSCHHHHHHHHHHHHTTSSCE--EEEEEEC-----CCTTSCCTTTTTTSEEEEEECTTCC
T ss_pred CCCCCEEEECCCCchHHHHHHHHhccccCCE--EEEeCCcCCCCcchHHHhhHHHhCCCeEEEecCCCCC
Confidence 7899999999988776667788877652222 233 2211 232233466777789999997653
No 50
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=83.91 E-value=0.28 Score=36.49 Aligned_cols=21 Identities=24% Similarity=0.591 Sum_probs=18.3
Q ss_pred CCCCCCCcEEEEcc--CCcccCH
Q 045269 1 MSDVCTSSLLVNIV--RGGLLDY 21 (99)
Q Consensus 1 l~~mk~~ailIN~a--Rg~lvd~ 21 (99)
++.||+|+++||+| ||+.+++
T Consensus 279 l~~mk~g~vIVdva~~~Gg~v~~ 301 (401)
T 1x13_A 279 VDSMKAGSVIVDLAAQNGGNCEY 301 (401)
T ss_dssp HHTSCTTCEEEETTGGGTCSBTT
T ss_pred HhcCCCCcEEEEEcCCCCCCcCc
Confidence 35799999999999 9998876
No 51
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=81.38 E-value=0.53 Score=34.74 Aligned_cols=26 Identities=15% Similarity=0.204 Sum_probs=12.3
Q ss_pred CcEEEEccCCcccCHHHHHHHHHhCCc
Q 045269 7 SSLLVNIVRGGLLDYEAVAHYLESGHL 33 (99)
Q Consensus 7 ~ailIN~aRg~lvd~~aL~~aL~~g~i 33 (99)
..++||+||+.+++++| .++|+++.+
T Consensus 254 ~~iVie~AN~p~t~~eA-~~~L~~~gI 279 (355)
T 1c1d_A 254 CSVVAGAANNVIADEAA-SDILHARGI 279 (355)
T ss_dssp CSEECCSCTTCBCSHHH-HHHHHHTTC
T ss_pred CCEEEECCCCCCCCHHH-HHHHHhCCE
Confidence 34555555555555444 344444444
No 52
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=76.13 E-value=15 Score=25.32 Aligned_cols=60 Identities=12% Similarity=0.037 Sum_probs=36.9
Q ss_pred CCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCCccccCCceEeccCCCCCcHHHHHH
Q 045269 3 DVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPNDPILKFQSVLITPHVGGVTEHSYRS 74 (99)
Q Consensus 3 ~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~~~ 74 (99)
.+++++++++.+.+ +...++.+++... ...+++..+. |.+..+.+.++||- ..+.+...+
T Consensus 110 ~~~~~~il~s~tS~--~~~~~la~~~~~~-~~~ig~h~~~--------p~~~~~lvevv~~~-~t~~~~~~~ 169 (283)
T 4e12_A 110 LAPAKTIFATNSST--LLPSDLVGYTGRG-DKFLALHFAN--------HVWVNNTAEVMGTT-KTDPEVYQQ 169 (283)
T ss_dssp HSCTTCEEEECCSS--SCHHHHHHHHSCG-GGEEEEEECS--------STTTSCEEEEEECT-TSCHHHHHH
T ss_pred hCCCCcEEEECCCC--CCHHHHHhhcCCC-cceEEEccCC--------CcccCceEEEEeCC-CCCHHHHHH
Confidence 47899999944433 4567888877543 3446666553 34556778888883 334444433
No 53
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=75.64 E-value=12 Score=26.43 Aligned_cols=69 Identities=13% Similarity=0.009 Sum_probs=39.4
Q ss_pred CCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCC---CCCCCCccccCCceEeccCCCCCcHHHHHH
Q 045269 3 DVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTE---PFDPNDPILKFQSVLITPHVGGVTEHSYRS 74 (99)
Q Consensus 3 ~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~E---p~~~~~~l~~~~nvi~TPH~a~~t~~~~~~ 74 (99)
.+++++++++++.....-.+++.+.+.. ++.+. -=++..| |......|+.-..+++||+-+ .+.+..++
T Consensus 117 ~l~~~~iv~d~~Svk~~~~~~~~~~l~~-~~v~~-hPm~G~e~sG~~~A~~~Lf~g~~~il~~~~~-~~~~~~~~ 188 (314)
T 3ggo_A 117 ILSEDATVTDQGSVKGKLVYDLENILGK-RFVGG-HPIAGTEKSGVEYSLDNLYEGKKVILTPTKK-TDKKRLKL 188 (314)
T ss_dssp HSCTTCEEEECCSCCTHHHHHHHHHHGG-GEECE-EECCCCCCCSGGGCCTTTTTTCEEEECCCTT-SCHHHHHH
T ss_pred ccCCCcEEEECCCCcHHHHHHHHHhcCC-CEEec-CcccCCcccchhhhhhhhhcCCEEEEEeCCC-CCHHHHHH
Confidence 4789999999987654445566666644 22211 1122222 222334567778899999843 45554443
No 54
>1iwp_B Glycerol dehydratase beta subunit; cobalamin, radical catalysis, lyase; HET: B12; 2.10A {Klebsiella pneumoniae} SCOP: c.51.3.1 PDB: 1mmf_B*
Probab=75.51 E-value=8.5 Score=26.14 Aligned_cols=80 Identities=23% Similarity=0.281 Sum_probs=52.3
Q ss_pred EEEccCCcccCHHHHHHHHHhCCcceEEEe-----cCCCCCCCCCCccccCCceEeccCCCCCcHHHHHHHHHHHHHHHH
Q 045269 10 LVNIVRGGLLDYEAVAHYLESGHLGGLGLD-----VAWTEPFDPNDPILKFQSVLITPHVGGVTEHSYRSTAKVVGDVAL 84 (99)
Q Consensus 10 lIN~aRg~lvd~~aL~~aL~~g~i~gaalD-----V~~~Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~~~~~~~~~~~l~ 84 (99)
++.+.+..=+..-|...|..|+--.|.++| |....-+++..+|...++ .|... .+.++ .+=.|--
T Consensus 71 vi~v~~~~Dv~~lA~~AA~~S~LgVGIGI~s~g~~VIH~r~Lpp~~~Lelf~~---apl~~---~e~~R----~IG~NAA 140 (194)
T 1iwp_B 71 VVRILRTSDVSFMAWDAANLSGSGIGIGIQSKGTTVIHQRDLLPLSNLELFSQ---APLLT---LETYR----QIGKNAA 140 (194)
T ss_dssp EEECCSCCCHHHHHHHHHHHSTTSEEEEECTTCCEEEEETTSCTTCCSEEECC---GGGCC---HHHHH----HHHHHHH
T ss_pred EEEecCCCCHHHHHHHHHHhCCCceEEEECCCCcEEEEeCCCCCCCccccccc---CCCCC---HHHHH----HHHHHHH
Confidence 456666666667788889999999999999 344444545544443322 23332 34343 4446777
Q ss_pred HHHcCCCCCcccccC
Q 045269 85 QLHAGTPLTGIEPVN 99 (99)
Q Consensus 85 ~~~~g~~~~~~~~~n 99 (99)
++.+|.|+..+-+.|
T Consensus 141 RLVKG~Pf~pvp~~n 155 (194)
T 1iwp_B 141 RYARKESPSPVPVVN 155 (194)
T ss_dssp HHHTTCCCCCCCCCC
T ss_pred HHHcCCCCCcccccC
Confidence 899999999887666
No 55
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=74.13 E-value=1.3 Score=33.30 Aligned_cols=21 Identities=24% Similarity=0.537 Sum_probs=17.6
Q ss_pred CCCCCCCcEEEEcc--CCcccCH
Q 045269 1 MSDVCTSSLLVNIV--RGGLLDY 21 (99)
Q Consensus 1 l~~mk~~ailIN~a--Rg~lvd~ 21 (99)
++.||+|+++|++| +|+.++.
T Consensus 299 v~~Mk~GsVIVDvA~d~GG~~e~ 321 (405)
T 4dio_A 299 LDSMKPGSVVVDLAVERGGNIEG 321 (405)
T ss_dssp HTTSCTTCEEEETTGGGTCSBTT
T ss_pred HhcCCCCCEEEEEeCCCCCCccc
Confidence 36899999999998 8877655
No 56
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=73.06 E-value=1.4 Score=32.19 Aligned_cols=20 Identities=15% Similarity=0.423 Sum_probs=16.3
Q ss_pred CCCCCCCcEEEEcc--CCcccC
Q 045269 1 MSDVCTSSLLVNIV--RGGLLD 20 (99)
Q Consensus 1 l~~mk~~ailIN~a--Rg~lvd 20 (99)
++.||+|+++||+| ||+.++
T Consensus 281 l~~mk~g~vivdva~~~gg~~~ 302 (384)
T 1l7d_A 281 VTKMKPGSVIIDLAVEAGGNCP 302 (384)
T ss_dssp HTTSCTTCEEEETTGGGTCSST
T ss_pred HhcCCCCCEEEEEecCCCCCee
Confidence 36899999999999 877554
No 57
>1eex_B Propanediol dehydratase; coenzyme B12, potassium ION, TIM barrel, lyase; HET: COY; 1.70A {Klebsiella oxytoca} SCOP: c.51.3.1 PDB: 1dio_B* 1egm_B* 1egv_B* 1iwb_B* 1uc4_B* 1uc5_B* 3auj_B*
Probab=72.03 E-value=12 Score=25.97 Aligned_cols=80 Identities=18% Similarity=0.261 Sum_probs=52.2
Q ss_pred EEEccCCcccCHHHHHHHHHhCCcceEEEe-----cCCCCCCCCCCccccCCceEeccCCCCCcHHHHHHHHHHHHHHHH
Q 045269 10 LVNIVRGGLLDYEAVAHYLESGHLGGLGLD-----VAWTEPFDPNDPILKFQSVLITPHVGGVTEHSYRSTAKVVGDVAL 84 (99)
Q Consensus 10 lIN~aRg~lvd~~aL~~aL~~g~i~gaalD-----V~~~Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~~~~~~~~~~~l~ 84 (99)
++.+.+..=+..-|...|..|+--.|.++| |....-+++..+|...++ .|... .+.++ .+=.|--
T Consensus 104 vi~v~~~~Dv~~lA~~AA~~S~LgVGIGI~s~g~~VIH~r~Lpp~~~Lelf~~---apl~~---~e~~R----~IG~NAA 173 (224)
T 1eex_B 104 VIRCFKSSDVAFVAVEGNRLSGSGISIGIQSKGTTVIHQQGLPPLSNLELFPQ---APLLT---LETYR----QIGKNAA 173 (224)
T ss_dssp EEECCSCCSHHHHHHHHHHHCTTSEEEEECTTCCEEEEETTSCTTCCSEEECC---GGGCC---HHHHH----HHHHHHH
T ss_pred EEEecCCCCHHHHHHHHHHhCCCceEEEECCCCcEEEEcCCCCCCCccccccc---CCCCC---HHHHH----HHHHHHH
Confidence 456666666667788889999999999999 344444445544443322 23332 34343 4446777
Q ss_pred HHHcCCCCCcccccC
Q 045269 85 QLHAGTPLTGIEPVN 99 (99)
Q Consensus 85 ~~~~g~~~~~~~~~n 99 (99)
+|.+|.|+..+-+.|
T Consensus 174 RLVKG~Pf~pvp~~n 188 (224)
T 1eex_B 174 RYAKRESPQPVPTLN 188 (224)
T ss_dssp HHHTTCCCCCCCCCC
T ss_pred HHHcCCCCCcccccC
Confidence 899999999887666
No 58
>1ytm_A Phosphoenolpyruvate carboxykinase [ATP], phosphoenolpyruvate; domain closure, nucleotide binding; HET: ATP; 2.20A {Anaerobiospirillum succiniciproducens} PDB: 1yvy_A
Probab=64.14 E-value=12 Score=29.18 Aligned_cols=76 Identities=12% Similarity=0.108 Sum_probs=47.1
Q ss_pred CcEEEEcc------CCcccCHHHHHHHHHhCCcceE---EEecCCCCCCCCCCccccCCceEeccCCCCCcHHHHHHHHH
Q 045269 7 SSLLVNIV------RGGLLDYEAVAHYLESGHLGGL---GLDVAWTEPFDPNDPILKFQSVLITPHVGGVTEHSYRSTAK 77 (99)
Q Consensus 7 ~ailIN~a------Rg~lvd~~aL~~aL~~g~i~ga---alDV~~~Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~~~~~~ 77 (99)
.++||||+ |..+-...++++++.+|.+..+ -.++|.-+- |. .+=..|.-++.|.-.+...+++++.++
T Consensus 429 ~vylvNTg~~G~g~r~~~~~Tr~ii~ai~~G~l~~~~~~~~~~fg~~v-P~--~~~gv~~~~l~p~~~w~d~~~y~~~a~ 505 (532)
T 1ytm_A 429 KAYLVNTGWNGTGKRISIKDTRGIIDAILDGSIDTANTATIPYFNFTV-PT--ELKGVDTKILDPRNTYADASEWEVKAK 505 (532)
T ss_dssp EEEEEECSBCTTSSBCCHHHHHHHHHHHHTSGGGGSCEEEETTTTEEE-ES--CCTTSCTGGGSGGGGSSSHHHHHHHHH
T ss_pred eEEEEeCCccccCccCCHHHHHHHHHHHhcCCcCCCCceeCCCCCccC-cc--cCCCCCHHhcCcccccCCHHHHHHHHH
Confidence 46899986 4455677899999999988622 233332221 01 111245558999988877777766665
Q ss_pred HHHHHHHH
Q 045269 78 VVGDVALQ 85 (99)
Q Consensus 78 ~~~~~l~~ 85 (99)
.+++....
T Consensus 506 ~L~~~F~~ 513 (532)
T 1ytm_A 506 DLAERFQK 513 (532)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55554443
No 59
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=63.94 E-value=6.5 Score=29.40 Aligned_cols=58 Identities=12% Similarity=0.122 Sum_probs=37.1
Q ss_pred CCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEe-cCCCCCCCCCCc---cccCCceEe
Q 045269 3 DVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLD-VAWTEPFDPNDP---ILKFQSVLI 60 (99)
Q Consensus 3 ~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalD-V~~~Ep~~~~~~---l~~~~nvi~ 60 (99)
.|++|.++|++|....-..+.+.+.+.+....+.... ++.+|+..+... +...+++++
T Consensus 120 ~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~~~~d~~V~~~Pe~~~~G~~~~d~~~~~rivv 181 (467)
T 2q3e_A 120 NSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPEFLAEGTAIKDLKNPDRVLI 181 (467)
T ss_dssp TCCSEEEEEECSCCCTTHHHHHHHHHHHTCCTTCEEEEEECCCCCCTTSHHHHHHSCSCEEE
T ss_pred hCCCCCEEEECCcCCchHHHHHHHHHHHhCCCCCCeEEEeCHHHhhcccchhhccCCCEEEE
Confidence 5789999999998887778888888887543222222 345565544432 345566653
No 60
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=63.15 E-value=24 Score=23.82 Aligned_cols=66 Identities=9% Similarity=0.041 Sum_probs=35.2
Q ss_pred CCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCC---CCCCCCCccccCCceEeccCCCCCcHHHH
Q 045269 3 DVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWT---EPFDPNDPILKFQSVLITPHVGGVTEHSY 72 (99)
Q Consensus 3 ~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~---Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~ 72 (99)
.++++.++|+++.......+.+.+.+. ++.+. .-++.. .|....+.++.-+.++++|+-++ +.+..
T Consensus 80 ~~~~~~~vv~~~~~~~~~~~~~~~~~~--~~~~~-~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~~~-~~~~~ 148 (279)
T 2f1k_A 80 HLSPTAIVTDVASVKTAIAEPASQLWS--GFIGG-HPMAGTAAQGIDGAEENLFVNAPYVLTPTEYT-DPEQL 148 (279)
T ss_dssp GSCTTCEEEECCSCCHHHHHHHHHHST--TCEEE-EECCCCSCSSGGGCCTTTTTTCEEEEEECTTC-CHHHH
T ss_pred hCCCCCEEEECCCCcHHHHHHHHHHhC--CEeec-CcccCCccCCHHHHhHHHhCCCcEEEecCCCC-CHHHH
Confidence 478899999997765555555555432 33221 122211 22222234555567888987543 44433
No 61
>1j3b_A ATP-dependent phosphoenolpyruvate carboxykinase; adenosine triphosphate, T thermophilus; 2.00A {Thermus thermophilus} SCOP: c.91.1.1 c.109.1.1 PDB: 1xkv_A* 2pc9_A*
Probab=62.96 E-value=8.7 Score=29.84 Aligned_cols=77 Identities=22% Similarity=0.199 Sum_probs=48.1
Q ss_pred CCcEEEEccC----------CcccCHHHHHHHHHhCCcceEEEec-CCCCCCCCC--CccccCCce---EeccCCCCCcH
Q 045269 6 TSSLLVNIVR----------GGLLDYEAVAHYLESGHLGGLGLDV-AWTEPFDPN--DPILKFQSV---LITPHVGGVTE 69 (99)
Q Consensus 6 ~~ailIN~aR----------g~lvd~~aL~~aL~~g~i~gaalDV-~~~Ep~~~~--~~l~~~~nv---i~TPH~a~~t~ 69 (99)
...++|||+- ..+-...++++++.+|.+. ++ |...|. .+ -| .+.|.| ++.|.-.+...
T Consensus 419 ~~v~lVNTgw~gg~yg~g~r~~~~~tr~~i~ai~~G~l~----~~~~~~~~~-fg~~vp-~~~~gv~~~~l~P~~~w~~~ 492 (529)
T 1j3b_A 419 PRVYLVNTGWTGGPYGVGYRFPLPVTRALLKAALSGALE----NVPYRRDPV-FGFEVP-LEAPGVPQELLNPRETWADK 492 (529)
T ss_dssp CEEEEEECSEESSSTTTSEECCHHHHHHHHHHHHHTGGG----GSCEEECTT-TCCEEE-SCBTTBCGGGGCGGGGSSCH
T ss_pred CeEEEEcCCcccCccCCCccCCHHHHHHHHHHHhcCCcc----CCceeECCc-cCccCc-ccCCCCChhhcCcccccCCH
Confidence 4578999653 3377889999999999883 11 111221 01 01 133444 89999888877
Q ss_pred HHHHH----HHHHHHHHHHHHHc
Q 045269 70 HSYRS----TAKVVGDVALQLHA 88 (99)
Q Consensus 70 ~~~~~----~~~~~~~~l~~~~~ 88 (99)
+++++ +++.+.+|+.+|..
T Consensus 493 ~~y~~~a~~L~~~f~~nf~~f~~ 515 (529)
T 1j3b_A 493 EAYDQQARKLARLFQENFQKYAS 515 (529)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc
Confidence 76654 45555667777754
No 62
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=60.48 E-value=2.8 Score=31.20 Aligned_cols=19 Identities=21% Similarity=0.471 Sum_probs=16.0
Q ss_pred CCCCCCcEEEEcc--CCcccC
Q 045269 2 SDVCTSSLLVNIV--RGGLLD 20 (99)
Q Consensus 2 ~~mk~~ailIN~a--Rg~lvd 20 (99)
+.||+|+++|++| +|+.+.
T Consensus 290 ~~MkpGsVIVDvA~d~GG~~e 310 (381)
T 3p2y_A 290 TGMQPGSVVVDLAGETGGNCE 310 (381)
T ss_dssp HTSCTTCEEEETTGGGTCSBT
T ss_pred hcCCCCcEEEEEeCCCCCccc
Confidence 5799999999998 777665
No 63
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=56.05 E-value=4.2 Score=31.24 Aligned_cols=16 Identities=19% Similarity=0.225 Sum_probs=14.6
Q ss_pred CCCCCCCcEEEEccCC
Q 045269 1 MSDVCTSSLLVNIVRG 16 (99)
Q Consensus 1 l~~mk~~ailIN~aRg 16 (99)
|+.||++++++|+||+
T Consensus 339 l~~mk~gaiVvNaG~~ 354 (488)
T 3ond_A 339 MKKMKNNAIVCNIGHF 354 (488)
T ss_dssp HTTSCTTEEEEESSST
T ss_pred HHhcCCCeEEEEcCCC
Confidence 4689999999999998
No 64
>2olr_A Phosphoenolpyruvate carboxykinase; carbon dioxide, lyase; HET: ATP; 1.60A {Escherichia coli K12} SCOP: c.91.1.1 c.109.1.1 PDB: 1k3c_A* 1k3d_A* 1aq2_A* 2olq_A* 1os1_A* 2pxz_X* 1ayl_A* 2py7_X* 1oen_A 1ylh_A* 1ygg_A*
Probab=55.91 E-value=6 Score=30.87 Aligned_cols=76 Identities=14% Similarity=0.198 Sum_probs=46.1
Q ss_pred CcEEEEcc------CCcccCHHHHHHHHHhCCcceE---EEecCCCCCCCCCCccccCCceEeccCCCCCcHHHHHHHHH
Q 045269 7 SSLLVNIV------RGGLLDYEAVAHYLESGHLGGL---GLDVAWTEPFDPNDPILKFQSVLITPHVGGVTEHSYRSTAK 77 (99)
Q Consensus 7 ~ailIN~a------Rg~lvd~~aL~~aL~~g~i~ga---alDV~~~Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~~~~~~ 77 (99)
.+++|||+ |..+=+..+|++++.+|.+..+ -.++|.-+- |.. +=..|.-++.|.-.|...+++++.++
T Consensus 435 ~vylvNTGw~Gggkri~~~~traii~ai~~g~l~~~~~~~~~~f~~~v-P~~--~~gv~~~~l~p~~~w~d~~~y~~~~~ 511 (540)
T 2olr_A 435 QAYLVNTGWNGTGKRISIKDTRAIIDAILNGSLDNAETFTLPMFNLAI-PTE--LPGVDTKILDPRNTYASPEQWQEKAE 511 (540)
T ss_dssp EEEEEECSBCTTSSBCCHHHHHHHHHHHHHTHHHHSCEEEETTTTEEE-ESC--CTTSCGGGGSGGGGSSSHHHHHHHHH
T ss_pred eEEEEeCCCcCCCccCCHHHHHHHHHHHhcCCcCCCCceeCCCcCccc-Ccc--CCCCChHhcCHhhhcCCHHHHHHHHH
Confidence 46899985 5556677799999999987421 222222110 011 11334458899888888777766655
Q ss_pred HHHHHHHH
Q 045269 78 VVGDVALQ 85 (99)
Q Consensus 78 ~~~~~l~~ 85 (99)
.+++....
T Consensus 512 ~L~~~f~~ 519 (540)
T 2olr_A 512 TLAKLFID 519 (540)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55554443
No 65
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=54.81 E-value=14 Score=26.00 Aligned_cols=32 Identities=9% Similarity=0.140 Sum_probs=27.2
Q ss_pred CCCCCCcEEEEccCCcccCHHHHHHHHHhCCc
Q 045269 2 SDVCTSSLLVNIVRGGLLDYEAVAHYLESGHL 33 (99)
Q Consensus 2 ~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i 33 (99)
..+++|.++|+++.........+.+.+++..+
T Consensus 109 ~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~ 140 (317)
T 4ezb_A 109 PHLSDEAVFIDLNSVGPDTKALAAGAIATGKG 140 (317)
T ss_dssp GGCCTTCEEEECCSCCHHHHHHHHHHHHTSSC
T ss_pred hhcCCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 45889999999999888889999999987544
No 66
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=52.80 E-value=9.7 Score=27.65 Aligned_cols=40 Identities=5% Similarity=0.025 Sum_probs=31.9
Q ss_pred CCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecC
Q 045269 2 SDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVA 41 (99)
Q Consensus 2 ~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~ 41 (99)
..+++|.++|+++.+...+...+.+.+++..+......|+
T Consensus 103 ~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVs 142 (358)
T 4e21_A 103 PLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTS 142 (358)
T ss_dssp GGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEE
T ss_pred hhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCC
Confidence 3578999999999999999999999998876654443443
No 67
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=49.63 E-value=8.9 Score=26.62 Aligned_cols=33 Identities=6% Similarity=-0.056 Sum_probs=27.7
Q ss_pred CCCCCCcEEEEccCCcccCHHHHHHHHHhCCcc
Q 045269 2 SDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLG 34 (99)
Q Consensus 2 ~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~ 34 (99)
..+++|.++|+++.........+.+.+.+..+.
T Consensus 93 ~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~ 125 (296)
T 3qha_A 93 GHAKPGTVIAIHSTISDTTAVELARDLKARDIH 125 (296)
T ss_dssp TTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCE
T ss_pred HhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCE
Confidence 468999999999999998888999999775443
No 68
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=47.22 E-value=16 Score=25.05 Aligned_cols=32 Identities=3% Similarity=-0.104 Sum_probs=27.2
Q ss_pred CCCCCCcEEEEccCCcccCHHHHHHHHHhCCc
Q 045269 2 SDVCTSSLLVNIVRGGLLDYEAVAHYLESGHL 33 (99)
Q Consensus 2 ~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i 33 (99)
..+++|.++|+++.+...+...+.+.+.+..+
T Consensus 83 ~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~ 114 (287)
T 3pdu_A 83 EGIGGGRGYIDMSTVDDETSTAIGAAVTARGG 114 (287)
T ss_dssp GTCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred hcccCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 45789999999999999888899998887544
No 69
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=44.10 E-value=17 Score=25.18 Aligned_cols=32 Identities=16% Similarity=-0.004 Sum_probs=26.7
Q ss_pred CCCCCCcEEEEccCCcccCHHHHHHHHHhCCc
Q 045269 2 SDVCTSSLLVNIVRGGLLDYEAVAHYLESGHL 33 (99)
Q Consensus 2 ~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i 33 (99)
..+++|.++|+++.........+.+.+.+..+
T Consensus 90 ~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~ 121 (303)
T 3g0o_A 90 HLMKPGSAVMVSSTISSADAQEIAAALTALNL 121 (303)
T ss_dssp GGSCTTCEEEECSCCCHHHHHHHHHHHHTTTC
T ss_pred hhCCCCCEEEecCCCCHHHHHHHHHHHHHcCC
Confidence 35789999999999988888889888887544
No 70
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=42.84 E-value=21 Score=25.04 Aligned_cols=32 Identities=13% Similarity=0.041 Sum_probs=27.8
Q ss_pred CCCCCcEEEEccCCcccCHHHHHHHHHhCCcc
Q 045269 3 DVCTSSLLVNIVRGGLLDYEAVAHYLESGHLG 34 (99)
Q Consensus 3 ~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~ 34 (99)
.+++|.++|+++.+...+...+.+.+++..+.
T Consensus 113 ~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~ 144 (320)
T 4dll_A 113 AMKPGSLFLDMASITPREARDHAARLGALGIA 144 (320)
T ss_dssp HCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred hCCCCCEEEecCCCCHHHHHHHHHHHHHcCCE
Confidence 47899999999999999999999999886553
No 71
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=42.65 E-value=22 Score=24.42 Aligned_cols=32 Identities=6% Similarity=0.047 Sum_probs=27.0
Q ss_pred CCCCCCcEEEEccCCcccCHHHHHHHHHhCCc
Q 045269 2 SDVCTSSLLVNIVRGGLLDYEAVAHYLESGHL 33 (99)
Q Consensus 2 ~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i 33 (99)
..++++.++|+++.+.......+.+.+.+..+
T Consensus 85 ~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~ 116 (302)
T 2h78_A 85 AHIAPGTLVLECSTIAPTSARKIHAAARERGL 116 (302)
T ss_dssp GSSCSSCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred hcCCCCcEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 35889999999999999888899999987543
No 72
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=42.42 E-value=34 Score=27.66 Aligned_cols=79 Identities=20% Similarity=0.258 Sum_probs=50.2
Q ss_pred EEEEccC---------CcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCCccccCC-----------------------
Q 045269 9 LLVNIVR---------GGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPNDPILKFQ----------------------- 56 (99)
Q Consensus 9 ilIN~aR---------g~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~~l~~~~----------------------- 56 (99)
++||+|+ .+--..++..+||+.| .+..-||||+..+. .+.|...|-
T Consensus 321 YfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~G-cRcvElD~Wdg~~~-~~ep~v~HG~Tlts~i~f~~v~~~I~~~AF~~ 398 (799)
T 2zkm_X 321 YFINSSHNTYLTAGQFSGLSSAEMYRQVLLSG-CRCVELDCWKGKPP-DEEPIITHGFTMTTDIFFKEAIEAIAESAFKT 398 (799)
T ss_dssp EEECBBSSTTBSSCSSSSCBCTHHHHHHHHTT-CCEEEEEEECCCTT-CCSCEECCTTSSCCCEEHHHHHHHHHHHTTSS
T ss_pred heEeccccceeecCcccCcccHHHHHHHHHhC-CCEEEEEeecCCCC-CCCCEEEeCCcccccccHHHHHHHHHHhcccC
Confidence 7788775 2234678899999987 56799999987531 122322221
Q ss_pred ---ceEecc--CCCCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 045269 57 ---SVLITP--HVGGVTEHSYRSTAKVVGDVALQLHAGTP 91 (99)
Q Consensus 57 ---nvi~TP--H~a~~t~~~~~~~~~~~~~~l~~~~~g~~ 91 (99)
=||+|= |. .|.+.+..|++.+.+.+-..+-..+
T Consensus 399 S~yPvIlslE~Hc--~s~~qQ~~ma~~~~~~~Gd~L~~~~ 436 (799)
T 2zkm_X 399 SPYPIILSFENHV--DSPRQQAKMAEYCRTIFGDMLLTEP 436 (799)
T ss_dssp CCSCEEEEEEECC--CCHHHHHHHHHHHHHHHGGGBCCSC
T ss_pred CCCCEEEEccccC--CCHHHHHHHHHHHHHHhhhheecCC
Confidence 255554 43 2577788888888777777654433
No 73
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=42.40 E-value=18 Score=24.58 Aligned_cols=30 Identities=7% Similarity=0.065 Sum_probs=25.2
Q ss_pred CCCCCCcEEEEccCCcccCHHHHHHHHHhC
Q 045269 2 SDVCTSSLLVNIVRGGLLDYEAVAHYLESG 31 (99)
Q Consensus 2 ~~mk~~ailIN~aRg~lvd~~aL~~aL~~g 31 (99)
..+++|.++|+++.|...+.+.+.+.+.+.
T Consensus 84 ~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 113 (295)
T 1yb4_A 84 KTSLQGKTIVDMSSISPIETKRFAQRVNEM 113 (295)
T ss_dssp TSCCTTEEEEECSCCCHHHHHHHHHHHHTT
T ss_pred hcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 357899999999999877888899988763
No 74
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=41.10 E-value=24 Score=26.78 Aligned_cols=40 Identities=13% Similarity=0.048 Sum_probs=31.7
Q ss_pred CCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecC
Q 045269 2 SDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVA 41 (99)
Q Consensus 2 ~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~ 41 (99)
..|++|.++|+++.+...+...+.+.+++..+.....-|.
T Consensus 91 ~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVs 130 (484)
T 4gwg_A 91 PLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVS 130 (484)
T ss_dssp GGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCcc
Confidence 4688999999999999999999999998876653333343
No 75
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=40.81 E-value=21 Score=24.08 Aligned_cols=30 Identities=13% Similarity=0.086 Sum_probs=25.7
Q ss_pred CCCCCCcEEEEccCCcccCHHHHHHHHHhC
Q 045269 2 SDVCTSSLLVNIVRGGLLDYEAVAHYLESG 31 (99)
Q Consensus 2 ~~mk~~ailIN~aRg~lvd~~aL~~aL~~g 31 (99)
..+++|.++|+++.+...+.+.+.+.+.+.
T Consensus 78 ~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 107 (289)
T 2cvz_A 78 PYLREGTYWVDATSGEPEASRRLAERLREK 107 (289)
T ss_dssp TTCCTTEEEEECSCCCHHHHHHHHHHHHTT
T ss_pred hhCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 467899999999998888888899988764
No 76
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=40.08 E-value=27 Score=24.24 Aligned_cols=35 Identities=6% Similarity=-0.092 Sum_probs=28.8
Q ss_pred CCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEec
Q 045269 4 VCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDV 40 (99)
Q Consensus 4 mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV 40 (99)
+++|.++|+++.....+...+.+.+++..+. .+|.
T Consensus 91 ~~~g~ivid~st~~~~~~~~l~~~~~~~g~~--~vda 125 (306)
T 3l6d_A 91 ALAHRTIVDYTTNAQDEGLALQGLVNQAGGH--YVKG 125 (306)
T ss_dssp HTTTCEEEECCCCCTTHHHHHHHHHHHTTCE--EEEE
T ss_pred ccCCCEEEECCCCCHHHHHHHHHHHHHcCCe--EEec
Confidence 5789999999999999999999999876543 4554
No 77
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=39.30 E-value=27 Score=26.07 Aligned_cols=39 Identities=10% Similarity=0.135 Sum_probs=31.8
Q ss_pred CCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCC
Q 045269 2 SDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAW 42 (99)
Q Consensus 2 ~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~ 42 (99)
+.||+|.+++-...-. ...+|.++|.++++..+++|...
T Consensus 106 ~~l~~g~~l~~~lh~~--~~~~l~~~l~~~~it~ia~E~i~ 144 (405)
T 4dio_A 106 SGYRSGAVVIAIMDPY--GNEEAISAMAGAGLTTFAMELMP 144 (405)
T ss_dssp GGSCTTCEEEEECCCT--TCHHHHHHHHHTTCEEEEGGGSC
T ss_pred hhcCCCcEEEEEeccc--cCHHHHHHHHHCCCeEEEeeccc
Confidence 5799999999776544 35789999999999999999865
No 78
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=38.77 E-value=28 Score=28.12 Aligned_cols=38 Identities=8% Similarity=-0.061 Sum_probs=29.7
Q ss_pred CceEeccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCC
Q 045269 56 QSVLITPHVGGVTEHSYRSTAKVVGDVALQLHAGTPLT 93 (99)
Q Consensus 56 ~nvi~TPH~a~~t~~~~~~~~~~~~~~l~~~~~g~~~~ 93 (99)
.++++|||+|-.......+..+..++.+.++++-+|..
T Consensus 417 ~~~~~s~hiGdl~~~~~~~~~~~~~~~~~~l~~~~p~~ 454 (772)
T 4g9i_A 417 GKVYPSQYIGNTGKVEVLEFMREAIAHFRKILRVKNLD 454 (772)
T ss_dssp TEEEECSCCCCSCSHHHHHHHHHHHHHHHTTSCSSCSS
T ss_pred CEEEEccccccCCCHHHHHHHHHHHHHHHHhhCCCCCC
Confidence 57899999999877766777778888888877766643
No 79
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=38.68 E-value=30 Score=25.63 Aligned_cols=40 Identities=13% Similarity=0.164 Sum_probs=32.2
Q ss_pred CCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCC
Q 045269 2 SDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWT 43 (99)
Q Consensus 2 ~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~ 43 (99)
+.||+|.+++-...-. ...+|.++|.++++..+++|....
T Consensus 100 ~~l~~g~~l~~~lh~~--~~~~l~~~l~~~~it~ia~E~i~~ 139 (381)
T 3p2y_A 100 SQLKPGSVLIGFLAPR--TQPELASRLRIADVTAFAMESIPR 139 (381)
T ss_dssp TTSCTTCEEEECCCTT--TCHHHHHHHHHTTCEEEEGGGCCS
T ss_pred hhccCCCEEEEEeccc--cCHHHHHHHHHCCCeEEEeecccc
Confidence 5799999999876543 356799999999999999998653
No 80
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=38.47 E-value=33 Score=23.33 Aligned_cols=29 Identities=10% Similarity=0.178 Sum_probs=24.6
Q ss_pred CCCCCcEEEEccCCcccCHHHHHHHHHhC
Q 045269 3 DVCTSSLLVNIVRGGLLDYEAVAHYLESG 31 (99)
Q Consensus 3 ~mk~~ailIN~aRg~lvd~~aL~~aL~~g 31 (99)
.+++|.++|+++.|...+.+.|.+.+.+.
T Consensus 88 ~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 116 (299)
T 1vpd_A 88 GAKPGTVLIDMSSIAPLASREISDALKAK 116 (299)
T ss_dssp HCCTTCEEEECSCCCHHHHHHHHHHHHTT
T ss_pred cCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 47899999999999877788898888764
No 81
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=35.97 E-value=21 Score=24.38 Aligned_cols=31 Identities=3% Similarity=-0.107 Sum_probs=26.6
Q ss_pred CCCCCcEEEEccCCcccCHHHHHHHHHhCCc
Q 045269 3 DVCTSSLLVNIVRGGLLDYEAVAHYLESGHL 33 (99)
Q Consensus 3 ~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i 33 (99)
.+++|.++|+++....-+...+.+.+++..+
T Consensus 84 ~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~ 114 (287)
T 3pef_A 84 GIGEGRGYVDMSTVDPATSQRIGVAVVAKGG 114 (287)
T ss_dssp HCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred cCCCCCEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 4789999999999999888999999887644
No 82
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=35.44 E-value=18 Score=25.24 Aligned_cols=32 Identities=3% Similarity=0.036 Sum_probs=26.9
Q ss_pred CCCCCCcEEEEccCCcccCHHHHHHHHHhCCc
Q 045269 2 SDVCTSSLLVNIVRGGLLDYEAVAHYLESGHL 33 (99)
Q Consensus 2 ~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i 33 (99)
..+++|.++|+++....-....+.+.+.+..+
T Consensus 103 ~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~ 134 (310)
T 3doj_A 103 EQICEGKGYIDMSTVDAETSLKINEAITGKGG 134 (310)
T ss_dssp GGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred hccCCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 35789999999999988888889988877544
No 83
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=35.40 E-value=12 Score=26.06 Aligned_cols=54 Identities=11% Similarity=-0.023 Sum_probs=30.0
Q ss_pred CCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCC-CCCCccccCCceEeccCC
Q 045269 3 DVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPF-DPNDPILKFQSVLITPHV 64 (99)
Q Consensus 3 ~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~-~~~~~l~~~~nvi~TPH~ 64 (99)
.+++++++++++....-..+++.+.+ .. ++....|. .+..+++.-..+++|||-
T Consensus 88 ~l~~~~iv~~~~svk~~~~~~~~~~~---~~-----~~v~~hP~~g~~~~~~~g~~~~l~~~~ 142 (298)
T 2pv7_A 88 YLTENMLLADLTSVKREPLAKMLEVH---TG-----AVLGLHPMFGADIASMAKQVVVRCDGR 142 (298)
T ss_dssp GCCTTSEEEECCSCCHHHHHHHHHHC---SS-----EEEEEEECSCTTCSCCTTCEEEEEEEE
T ss_pred hcCCCcEEEECCCCCcHHHHHHHHhc---CC-----CEEeeCCCCCCCchhhcCCeEEEecCC
Confidence 47899999999876543344444332 11 22222332 122245555678899974
No 84
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=34.91 E-value=44 Score=26.99 Aligned_cols=36 Identities=14% Similarity=0.110 Sum_probs=28.7
Q ss_pred CceEeccCCCCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 045269 56 QSVLITPHVGGVTEHSYRSTAKVVGDVALQLHAGTP 91 (99)
Q Consensus 56 ~nvi~TPH~a~~t~~~~~~~~~~~~~~l~~~~~g~~ 91 (99)
.++++|||+|-.....-.+..+..++.+.++++-+|
T Consensus 419 ~~~~~s~hiGdl~~~~~~~~~~~~~~~~~~l~~~~p 454 (761)
T 3vth_A 419 HYAFISHHIGDLDNEKAFNYYIEQIERYKKLFRVDP 454 (761)
T ss_dssp TEEEECCCCBCCCSHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CEEEEecCccCCCCHHHHHHHHHHHHHHHHHhCCCC
Confidence 578999999998776667777888888888877554
No 85
>2d0o_B DIOL dehydratase-reactivating factor small subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.51.3.2 PDB: 2d0p_B
Probab=33.45 E-value=88 Score=19.51 Aligned_cols=73 Identities=19% Similarity=0.255 Sum_probs=45.0
Q ss_pred EccCCcccCHHHHHHHHHhCCcceEEEec----CCCCCCCCCCccccCCceEeccCCCCCcHHHHHHHHHHHHHHHHHHH
Q 045269 12 NIVRGGLLDYEAVAHYLESGHLGGLGLDV----AWTEPFDPNDPILKFQSVLITPHVGGVTEHSYRSTAKVVGDVALQLH 87 (99)
Q Consensus 12 N~aRg~lvd~~aL~~aL~~g~i~gaalDV----~~~Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~~~~~~~~~~~l~~~~ 87 (99)
-..+..=+..-|...|..|+--.|.++|- ....-++++.||+. .+|+.. .+.++. +=.|--++.
T Consensus 39 ~~~~~~d~~~lA~~AA~~S~LgVGIGi~~~~~vih~k~L~~~~pL~~-----~~~~~~---~~~~R~----iG~NAARlv 106 (125)
T 2d0o_B 39 QHHPAGEVVDSAWQAARSSPLLVGIACDRHMLVVHYKNLPASAPLFT-----LMHHQD---SQAHRN----TGNNAARLV 106 (125)
T ss_dssp EEESSCCHHHHHHHHHHTCTTSEEEEECSSEEEEEETTSCTTCCSEE-----EETTSC---HHHHHH----HHHHHHHHH
T ss_pred EecCCCCHHHHHHHHHHhCCCceeEEECCCcEEEEcCCCCCCCChhh-----CCccCC---hHHHHH----HHHHHHHHH
Confidence 33445555666778888899888999982 11234456666665 556643 344444 445777889
Q ss_pred cCCCCCccc
Q 045269 88 AGTPLTGIE 96 (99)
Q Consensus 88 ~g~~~~~~~ 96 (99)
+|.|++.+.
T Consensus 107 KG~Pfk~~~ 115 (125)
T 2d0o_B 107 KGIPFRDLN 115 (125)
T ss_dssp TTCCCC---
T ss_pred hCCCCcccc
Confidence 999988753
No 86
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=31.29 E-value=31 Score=24.08 Aligned_cols=38 Identities=8% Similarity=0.105 Sum_probs=28.8
Q ss_pred CCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEe
Q 045269 2 SDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLD 39 (99)
Q Consensus 2 ~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalD 39 (99)
..++++.++|+++........++.+.+.+..+....+|
T Consensus 105 ~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd 142 (312)
T 3qsg_A 105 PHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAA 142 (312)
T ss_dssp GGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEE
T ss_pred hhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEe
Confidence 35789999999999998888999988877522223455
No 87
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=31.24 E-value=55 Score=22.90 Aligned_cols=38 Identities=11% Similarity=0.100 Sum_probs=30.7
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEec
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDV 40 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV 40 (99)
++.+++|.++|+++=...-+...+.+.+++..+ ..+|.
T Consensus 84 ~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~--~~lDa 121 (300)
T 3obb_A 84 LAHIAPGTLVLECSTIAPTSARKIHAAARERGL--AMLDA 121 (300)
T ss_dssp TTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTC--EEEEC
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC--EEEec
Confidence 357899999999999988899999999988765 36775
No 88
>1ii2_A Phosphoenolpyruvate carboxykinase; phosphate binding loop, lyase; 2.00A {Trypanosoma cruzi} SCOP: c.91.1.1 c.109.1.1
Probab=31.21 E-value=22 Score=27.61 Aligned_cols=78 Identities=14% Similarity=0.079 Sum_probs=45.6
Q ss_pred CcEEEEccC-C----------cccCHHHHHHHHHhCCcceE---EEecCCCCCCCCCCccccCCceEeccCCCCCcHHHH
Q 045269 7 SSLLVNIVR-G----------GLLDYEAVAHYLESGHLGGL---GLDVAWTEPFDPNDPILKFQSVLITPHVGGVTEHSY 72 (99)
Q Consensus 7 ~ailIN~aR-g----------~lvd~~aL~~aL~~g~i~ga---alDV~~~Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~ 72 (99)
.++||||+- | .+-...+++++..+|.+..+ -.++|.-+- |. .+=..|.-++.|.-.+...+++
T Consensus 408 ~vylvNTg~~Gg~yg~~g~r~~~~~tra~i~ai~~G~l~~~~~~~~~~fg~~v-P~--~~~gv~~~~l~p~~~w~d~~~y 484 (524)
T 1ii2_A 408 RVWLLNTGYAGGRADRGAKRMPLRVTRAIIDAIHDGTLDRTEYEEYPGWGLHI-PK--YVAKVPEHLLNPRKAWKDVRQF 484 (524)
T ss_dssp EEEEEECSEESSCGGGTCEECCHHHHHHHHHHHHSSSGGGSCEEEETTTTEEE-ES--CCTTSCHHHHSHHHHCSCHHHH
T ss_pred eEEEEeCCccccccCccCccCCHHHHHHHHHHHHcCCccCCceeECCccCccC-Cc--cCCCCChhhcChhhccCCHHHH
Confidence 468999865 3 34456899999999987422 222222111 01 1112344588898887777666
Q ss_pred HHH----HHHHHHHHH-HHH
Q 045269 73 RST----AKVVGDVAL-QLH 87 (99)
Q Consensus 73 ~~~----~~~~~~~l~-~~~ 87 (99)
++. ++.+.+|+. +|.
T Consensus 485 ~~~a~~L~~~F~~nf~~~f~ 504 (524)
T 1ii2_A 485 NETSKELVAMFQESFSARFA 504 (524)
T ss_dssp HHHHHHHHHHHHHHHHHHTG
T ss_pred HHHHHHHHHHHHHHHHHhhc
Confidence 554 445555666 554
No 89
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=30.91 E-value=54 Score=26.70 Aligned_cols=79 Identities=19% Similarity=0.173 Sum_probs=48.8
Q ss_pred cEEEEccC---------CcccCHHHHHHHHHhCCcceEEEecCCC---CCCCC-CC------cc------------cc--
Q 045269 8 SLLVNIVR---------GGLLDYEAVAHYLESGHLGGLGLDVAWT---EPFDP-ND------PI------------LK-- 54 (99)
Q Consensus 8 ailIN~aR---------g~lvd~~aL~~aL~~g~i~gaalDV~~~---Ep~~~-~~------~l------------~~-- 54 (99)
-++||+|+ ++--..++..+||..| .+..-||||+. ||.-- .+ ++ ..
T Consensus 331 ~YfI~sshntyL~g~ql~g~ss~~~y~~aL~~g-cRcvEld~wdg~~~ePvv~HG~Tlts~i~f~~v~~~I~~~AF~~S~ 409 (816)
T 3qr0_A 331 AYYINSSHNTYLTGHQLTGKSSVEIYRQVLLTG-CRCLELDCWDGKDGEPIITHGFTMCTEVLFKDVVYAIAESAFKVSD 409 (816)
T ss_dssp GEEECBBSSTTBSSCTTTSCBCSHHHHHHHHTT-CCEEEEEEECCTTSSCEECCTTSSCCCEEHHHHHHHHHHHTTSSCC
T ss_pred hheecccccchhccccccCcccHHHHHHHHHhC-CcEEEEEEecCCCCCceEccCCcccccccHHHHHHHHHHhcccCCC
Confidence 47888887 2345668899999988 55699999976 45310 00 01 01
Q ss_pred CCceEec--cCCCCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 045269 55 FQSVLIT--PHVGGVTEHSYRSTAKVVGDVALQLHAGTP 91 (99)
Q Consensus 55 ~~nvi~T--PH~a~~t~~~~~~~~~~~~~~l~~~~~g~~ 91 (99)
.| ||+| -|. +.+.+..|++.+.+.+-..+-..|
T Consensus 410 yP-vIlslE~Hc---~~~qQ~~ma~~~~~~~Gd~L~~~~ 444 (816)
T 3qr0_A 410 YP-VILSFENHC---SVAQQKLLAQYCNEAFGELLLDKP 444 (816)
T ss_dssp SC-EEEEEEECC---CHHHHHHHHHHHHHHHGGGBCCSC
T ss_pred CC-EEEEEecCC---CHHHHHHHHHHHHHHhhhhhccCC
Confidence 12 3333 364 467777888777777776654433
No 90
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=29.34 E-value=47 Score=22.82 Aligned_cols=32 Identities=9% Similarity=-0.016 Sum_probs=24.9
Q ss_pred CCCCCCcEEEEccCCcccCHHHHHHHHHhCCc
Q 045269 2 SDVCTSSLLVNIVRGGLLDYEAVAHYLESGHL 33 (99)
Q Consensus 2 ~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i 33 (99)
+.++++.++|+++.+.......+.+.+.....
T Consensus 112 ~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~ 143 (316)
T 2uyy_A 112 QGIRPGKCYVDMSTVDADTVTELAQVIVSRGG 143 (316)
T ss_dssp GGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred hcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 35789999999998877677788888865433
No 91
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=28.98 E-value=36 Score=27.05 Aligned_cols=36 Identities=14% Similarity=0.305 Sum_probs=27.6
Q ss_pred CceEeccCCCCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 045269 56 QSVLITPHVGGVTEHSYRSTAKVVGDVALQLHAGTP 91 (99)
Q Consensus 56 ~nvi~TPH~a~~t~~~~~~~~~~~~~~l~~~~~g~~ 91 (99)
.++++|||+|-.....-.+..+..++.+.++++-+|
T Consensus 322 ~~~~~SqhiGdl~~~~~~~~~~~~~~~~~~l~~~~p 357 (657)
T 3ttc_A 322 EQVVLSQHLGDLSDDGIQTQWREALRLMQNIYNFTP 357 (657)
T ss_dssp TEEEECCCCCCTTSTTHHHHHHHHHHHHHHHTTCCC
T ss_pred CEEEEccCccCCCCHHHHHHHHHHHHHHHHHhCCCC
Confidence 578999999987665556667778888888776554
No 92
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=28.37 E-value=47 Score=22.07 Aligned_cols=23 Identities=4% Similarity=-0.012 Sum_probs=19.5
Q ss_pred cCHHHHHHHHHhCCcceEEEecCC
Q 045269 19 LDYEAVAHYLESGHLGGLGLDVAW 42 (99)
Q Consensus 19 vd~~aL~~aL~~g~i~gaalDV~~ 42 (99)
-++++|.++|..|.+. +++|+..
T Consensus 114 ~~~~~i~~~l~~GPV~-v~i~~~~ 136 (222)
T 3u8e_A 114 NSSSALLDAVAKQPVS-VNIYTSS 136 (222)
T ss_dssp SCHHHHHHHHHHSCEE-EEECCCS
T ss_pred CcHHHHHHHHhCCCEE-EEEEecC
Confidence 5899999999999886 8888853
No 93
>3cuq_A Vacuolar-sorting protein SNF8; ESCRT, MBV, VPS, nucleus, protein transport, transc transcription regulation, transport, endosome; 2.61A {Homo sapiens} PDB: 2zme_A
Probab=27.60 E-value=21 Score=24.83 Aligned_cols=28 Identities=18% Similarity=0.148 Sum_probs=21.3
Q ss_pred EEccCC---cccCHHHHHHHHHhCCcceEEE
Q 045269 11 VNIVRG---GLLDYEAVAHYLESGHLGGLGL 38 (99)
Q Consensus 11 IN~aRg---~lvd~~aL~~aL~~g~i~gaal 38 (99)
+|-+|| +.|.++|+++|++.=+..|-++
T Consensus 104 ~~r~Rg~~~~~IS~dDi~rAik~L~~LG~g~ 134 (234)
T 3cuq_A 104 VLKGRGKFAQDVSQDDLIRAIKKLKALGTGF 134 (234)
T ss_dssp HHHTTTTCCSSCCHHHHHHHHHHHGGGBTTC
T ss_pred HHHhcCCccCccCHHHHHHHHHHHHhcCCCe
Confidence 567888 7999999999998855544333
No 94
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=25.96 E-value=44 Score=22.65 Aligned_cols=29 Identities=7% Similarity=0.007 Sum_probs=24.1
Q ss_pred CCCCCcEEEEccCCcccCHHHHHHHHHhC
Q 045269 3 DVCTSSLLVNIVRGGLLDYEAVAHYLESG 31 (99)
Q Consensus 3 ~mk~~ailIN~aRg~lvd~~aL~~aL~~g 31 (99)
.+++|.++|+++.|...+.+.|.+.+.+.
T Consensus 87 ~l~~~~~vv~~~~~~~~~~~~l~~~~~~~ 115 (301)
T 3cky_A 87 ACKAGTVIVDMSSVSPSSTLKMAKVAAEK 115 (301)
T ss_dssp HSCTTCEEEECCCCCHHHHHHHHHHHHHT
T ss_pred cCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 47889999999998766778888888764
No 95
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=25.91 E-value=69 Score=25.02 Aligned_cols=79 Identities=22% Similarity=0.156 Sum_probs=48.6
Q ss_pred EEEEccC---------CcccCHHHHHHHHHhCCcceEEEecCCC---CCCCC-----CC--c------------cccCC-
Q 045269 9 LLVNIVR---------GGLLDYEAVAHYLESGHLGGLGLDVAWT---EPFDP-----ND--P------------ILKFQ- 56 (99)
Q Consensus 9 ilIN~aR---------g~lvd~~aL~~aL~~g~i~gaalDV~~~---Ep~~~-----~~--~------------l~~~~- 56 (99)
++||.|+ .+--..++..+||+.| .+..-||||+. ||.-- .. + +...|
T Consensus 173 Yfi~SsHNTYL~G~Ql~~~ss~e~y~~aL~~G-cRcvElD~wdg~~~ep~v~HG~tlts~i~f~~v~~~I~~~AF~~s~y 251 (624)
T 1djx_A 173 YLVSSSHNTYLLEDQLTGPSSTEAYIRALCKG-CRCLELDCWDGPNQEPIIYHGYTFTSKILFCDVLRAIRDYAFKASPY 251 (624)
T ss_dssp EEECEESSTTBSSCSSSCCBCHHHHHHHHHTT-CCEEEEEEECCGGGCCEECCTTSCCCCEEHHHHHHHHHHHTTTSCSS
T ss_pred heeecccchhhhcCcccCCcCHHHHHHHHHhC-CcEEEEEeecCCCCCeEEecCCcccccccHHHHHHHHHHhcccCCCC
Confidence 6777775 1234678999999987 56799999986 45310 00 1 11111
Q ss_pred ceEecc--CCCCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 045269 57 SVLITP--HVGGVTEHSYRSTAKVVGDVALQLHAGTP 91 (99)
Q Consensus 57 nvi~TP--H~a~~t~~~~~~~~~~~~~~l~~~~~g~~ 91 (99)
=||+|= |. +.+.+..|++.+.+.+-..+-..+
T Consensus 252 PvilslE~Hc---~~~qQ~~ma~~~~~~~gd~L~~~~ 285 (624)
T 1djx_A 252 PVILSLENHC---SLEQQRVMARHLRAILGPILLDQP 285 (624)
T ss_dssp CEEEEEEEEC---CHHHHHHHHHHHHHHHGGGBCCSC
T ss_pred CEEEEecccC---CHHHHHHHHHHHHHHHhhhhcCCC
Confidence 245554 54 567778888877777766554433
No 96
>3pnu_A Dihydroorotase; TIM barrel, zinc binding, hydrolase, structu genomics, center for structural genomics of infectious DISE csgid; HET: KCX; 2.40A {Campylobacter jejuni subsp}
Probab=25.46 E-value=26 Score=25.37 Aligned_cols=24 Identities=33% Similarity=0.144 Sum_probs=19.7
Q ss_pred cCHHHHHHHHHhCCcc-eEEEecCC
Q 045269 19 LDYEAVAHYLESGHLG-GLGLDVAW 42 (99)
Q Consensus 19 vd~~aL~~aL~~g~i~-gaalDV~~ 42 (99)
=|.++|.++|++|.|- -.+.|=-.
T Consensus 240 ~dr~aL~~al~dG~id~~iaTDHaP 264 (359)
T 3pnu_A 240 EDKEALCELAFSGYEKVMFGSDSAP 264 (359)
T ss_dssp HHHHHHHHHHHTTCTTEEECCCBCC
T ss_pred HHHHHHHHHHhcCCCCEEEecCCCC
Confidence 4789999999999998 57877543
No 97
>2b0a_A Hypothetical protein MJ0783; structural genomics, PSI, protein STRU initiative; 1.45A {Methanocaldococcus jannaschii} SCOP: c.8.8.1
Probab=25.36 E-value=66 Score=21.05 Aligned_cols=42 Identities=10% Similarity=0.027 Sum_probs=29.9
Q ss_pred CCC-CcEEEEccCCcccCH---------HHHHHHHHhCCcceEEEecCCCCC
Q 045269 4 VCT-SSLLVNIVRGGLLDY---------EAVAHYLESGHLGGLGLDVAWTEP 45 (99)
Q Consensus 4 mk~-~ailIN~aRg~lvd~---------~aL~~aL~~g~i~gaalDV~~~Ep 45 (99)
+++ ..+|++|+...-... .+..++|.+..+++.+.|.+..|+
T Consensus 81 i~~gd~vlirTg~~~~~~~~~~~~~pgl~eaa~~L~~~~v~~vG~D~~s~d~ 132 (186)
T 2b0a_A 81 LPACDILLIYTGFSKYWGRDEYFEKIPEIPFLDDIIKSNIKCVGIDACTIGG 132 (186)
T ss_dssp CCSCSEEEEECSGGGGTTSGGGGGCCCCCTTHHHHHHSCCCEEEESSSCSSS
T ss_pred CCCCcEEEEECCchhhcCCchhhcCCCHHHHHHHHHHCCCCEEEEcCCCCCC
Confidence 444 368899984422211 345788888999999999998876
No 98
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*
Probab=25.34 E-value=58 Score=21.44 Aligned_cols=22 Identities=9% Similarity=0.093 Sum_probs=18.8
Q ss_pred CHHHHHHHHHhCCcceEEEecCC
Q 045269 20 DYEAVAHYLESGHLGGLGLDVAW 42 (99)
Q Consensus 20 d~~aL~~aL~~g~i~gaalDV~~ 42 (99)
|+++|.++|.+|.+. +++|+..
T Consensus 115 ~~~~i~~~l~~GPV~-v~i~~~~ 136 (208)
T 1o0e_A 115 NEXALKQAVAVQPST-VAIDASS 136 (208)
T ss_dssp CHHHHHHHHHHSCEE-EEECCCS
T ss_pred CHHHHHHHHHhCCEE-EEEEccC
Confidence 789999999999886 8889853
No 99
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=25.10 E-value=58 Score=21.54 Aligned_cols=22 Identities=14% Similarity=0.140 Sum_probs=18.9
Q ss_pred CHHHHHHHHHhCCcceEEEecCC
Q 045269 20 DYEAVAHYLESGHLGGLGLDVAW 42 (99)
Q Consensus 20 d~~aL~~aL~~g~i~gaalDV~~ 42 (99)
|+++|.++|..|.+. +++|+..
T Consensus 116 ~~~~ik~~l~~GPV~-v~i~~~~ 137 (215)
T 1iwd_A 116 NESALQSAVASQPVS-VTVEAAG 137 (215)
T ss_dssp CHHHHHHHHHHSCEE-EEECCCS
T ss_pred cHHHHHHHHHhCCEE-EEEecCC
Confidence 789999999999886 8888854
No 100
>2pa8_L DNA-directed RNA polymerase subunit L; ferredoxin-like Fe-S binding motif, platform for RNA polymer assembly, transferase; 1.76A {Sulfolobus solfataricus} PDB: 2pmz_L 3hkz_L 2waq_L 2wb1_L 2y0s_L
Probab=24.95 E-value=1.1e+02 Score=17.79 Aligned_cols=51 Identities=6% Similarity=-0.071 Sum_probs=34.1
Q ss_pred HhCCcceEEEecCCCCCCCCCCccccCCceEeccCCCCCcHHHHHHHHHHHHHHHHHHH
Q 045269 29 ESGHLGGLGLDVAWTEPFDPNDPILKFQSVLITPHVGGVTEHSYRSTAKVVGDVALQLH 87 (99)
Q Consensus 29 ~~g~i~gaalDV~~~Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~~~~~~~~~~~l~~~~ 87 (99)
+.-.+..|+.++ .||+...+++.+.---+....++..+..+.+.+.+..+.
T Consensus 34 ~~p~V~fagY~v--------pHPl~~~~~lrIqT~~~~~p~~al~~a~~~l~~~~~~~~ 84 (92)
T 2pa8_L 34 RISGVSFASYYQ--------PHPLSDKIIVKILTDGSITPKDALLKAIENIRGMTSHYI 84 (92)
T ss_dssp TSTTEEEEEEEC--------SSTTSCCEEEEEEECSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCeeEEEeec--------CCCCCCceEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 445666788777 466777777766665343466788888777777666554
No 101
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=24.90 E-value=7.3 Score=27.82 Aligned_cols=54 Identities=17% Similarity=0.079 Sum_probs=28.2
Q ss_pred CCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCC---cccc---CCceEeccCCC
Q 045269 3 DVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPND---PILK---FQSVLITPHVG 65 (99)
Q Consensus 3 ~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~---~l~~---~~nvi~TPH~a 65 (99)
.|++|++++.++ | +.. ..+.+. .....||+...|..+.+ .++. -..+++|||..
T Consensus 96 ~l~~~~ivi~~~-g--v~~--~~~~~~----~~~~~~vv~~~P~gp~~a~~~l~~~G~g~~~ii~~~~~ 155 (338)
T 1np3_A 96 NLKKGATLAFAH-G--FSI--HYNQVV----PRADLDVIMIAPKAPGHTVRSEFVKGGGIPDLIAIYQD 155 (338)
T ss_dssp GCCTTCEEEESC-C--HHH--HTTSSC----CCTTCEEEEEEESSCSHHHHHHHHTTCCCCEEEEEEEC
T ss_pred hCCCCCEEEEcC-C--chh--HHHhhc----CCCCcEEEeccCCCCchhHHHHHhccCCCeEEEEecCC
Confidence 578999999663 2 222 111111 12234565555643333 2333 45678899854
No 102
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...
Probab=24.77 E-value=60 Score=21.39 Aligned_cols=22 Identities=14% Similarity=0.080 Sum_probs=18.9
Q ss_pred CHHHHHHHHHhCCcceEEEecCC
Q 045269 20 DYEAVAHYLESGHLGGLGLDVAW 42 (99)
Q Consensus 20 d~~aL~~aL~~g~i~gaalDV~~ 42 (99)
|+++|.++|..|.+. +++|+..
T Consensus 117 ~~~~i~~~l~~GPV~-v~i~~~~ 138 (212)
T 2cio_A 117 NEGALLYSIANQPVS-VVLEAAG 138 (212)
T ss_dssp CHHHHHHHHHHSCEE-EEECCCS
T ss_pred cHHHHHHHHHhCCEE-EEEeccC
Confidence 789999999999885 8899853
No 103
>2jwk_A Protein TOLR; periplasmic domain, membrane, inner membrane, protein transport, transmembrane, transport, membrane protein; NMR {Haemophilus influenzae} PDB: 2jwl_A
Probab=24.72 E-value=81 Score=16.65 Aligned_cols=25 Identities=20% Similarity=0.145 Sum_probs=19.1
Q ss_pred CCCcEEEEccCC---cccCHHHHHHHHHh
Q 045269 5 CTSSLLVNIVRG---GLLDYEAVAHYLES 30 (99)
Q Consensus 5 k~~ailIN~aRg---~lvd~~aL~~aL~~ 30 (99)
++|.+++|.. + ..++.++|...|+.
T Consensus 11 ~dG~~~~~~~-~~~~~~v~~~~L~~~l~~ 38 (74)
T 2jwk_A 11 GIGKYAISIG-GERQEGLTEEMVTQLSRQ 38 (74)
T ss_dssp SSSCEEEEET-TEEEEEECHHHHHHHHHH
T ss_pred cCccEEEecC-CCcCcccCHHHHHHHHHH
Confidence 5678888862 4 77899999888865
No 104
>2p12_A Hypothetical protein DUF402; APC7392, beta-barrel, rhodococcus SP. RHA1, structural genom 2, protein structure initiative; 1.63A {Rhodococcus SP} SCOP: b.175.1.1
Probab=24.35 E-value=37 Score=22.59 Aligned_cols=20 Identities=25% Similarity=0.330 Sum_probs=16.9
Q ss_pred CCcccCHHHHHHHHHhCCcc
Q 045269 15 RGGLLDYEAVAHYLESGHLG 34 (99)
Q Consensus 15 Rg~lvd~~aL~~aL~~g~i~ 34 (99)
.-.++|++.|.+|++.|.|.
T Consensus 116 ~~~vlDeDEL~~A~~~GlIs 135 (176)
T 2p12_A 116 DTELLDVDELMEAHTTGLLD 135 (176)
T ss_dssp EEEEECHHHHHHHHHTTSSC
T ss_pred ceEEecHHHHHHHHHcCCCC
Confidence 35678999999999999874
No 105
>1jqk_A CODH, carbon monoxide dehydrogenase; rossmann fold, oxidoreductase; 2.80A {Rhodospirillum rubrum} SCOP: e.26.1.2
Probab=24.11 E-value=54 Score=26.12 Aligned_cols=30 Identities=17% Similarity=0.233 Sum_probs=22.9
Q ss_pred cCCcccCHHHHHHHHHhCCcceEEEecCCCCCC
Q 045269 14 VRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPF 46 (99)
Q Consensus 14 aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~ 46 (99)
+||.+ ..|.+++++|+|+|+++=|==..|-
T Consensus 426 ~~g~~---~~lidaIk~G~Irg~v~vvGCdn~~ 455 (639)
T 1jqk_A 426 ADDPL---KPLVDNVVNGNIQGIVLFVGCNTTK 455 (639)
T ss_dssp SSCTH---HHHHHHHHHTSSCEEEEECCCCCTT
T ss_pred ccCch---HHHHHHHHcCCCCeEEEEecCCCCC
Confidence 45554 6799999999999998877544443
No 106
>3cuq_B Vacuolar protein-sorting-associated protein 36; ESCRT, MBV, VPS, nucleus, protein transport, transc transcription regulation, transport, endosome; 2.61A {Homo sapiens} PDB: 2zme_B
Probab=24.03 E-value=26 Score=23.81 Aligned_cols=23 Identities=30% Similarity=0.264 Sum_probs=16.9
Q ss_pred EEccCC-cccCHHHHHHHHHhCCc
Q 045269 11 VNIVRG-GLLDYEAVAHYLESGHL 33 (99)
Q Consensus 11 IN~aRg-~lvd~~aL~~aL~~g~i 33 (99)
+|-+|| ++|.++++++|.+.=+.
T Consensus 105 ~nraRG~~lVSp~Dl~~A~~~l~~ 128 (218)
T 3cuq_B 105 VNRARGMELLSPEDLVNACKMLEA 128 (218)
T ss_dssp HHHTCSSSCCCHHHHHHHHHTTTT
T ss_pred HHHHcCCCCCCHHHHHHHHHHHHH
Confidence 466777 57888888888876433
No 107
>1oao_A CODH, carbon monoxide dehydrogenase/acetyl-COA synthase beta; oxidoreductase-transferase complex, electron transfer, oxidoreductase; 1.90A {Moorella thermoacetica} SCOP: e.26.1.2 PDB: 1mjg_A 2z8y_A 3i01_A 3i04_A
Probab=23.97 E-value=52 Score=26.35 Aligned_cols=47 Identities=15% Similarity=0.234 Sum_probs=30.4
Q ss_pred cCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCC--------ccccCCceEeccC
Q 045269 14 VRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPND--------PILKFQSVLITPH 63 (99)
Q Consensus 14 aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~--------~l~~~~nvi~TPH 63 (99)
+||.+ ..|.+++++|+|+|+++=|==..|-...+ .|+...-+|+|-=
T Consensus 445 ~~g~~---~~lidaIk~G~Irg~v~vvGCdn~~~~~dy~~~e~akeLi~~D~lVLt~G 499 (674)
T 1oao_A 445 AQNPI---RVLNQAILDGELAGVALICGCNNLKGFQDNSHLTVMKELLKNNVFVVATG 499 (674)
T ss_dssp SSCTH---HHHHHHHHTTSSCEEEEECCCCCTTSCBTHHHHHHHHHHHHTTEEEEEEH
T ss_pred ccCch---HHHHHHHHcCCCCeEEEEecCCCCCCCcccHHHHHHHHhccCCEEEEecc
Confidence 45543 67999999999999988775444432222 2345555677653
No 108
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=23.68 E-value=70 Score=23.97 Aligned_cols=32 Identities=6% Similarity=-0.050 Sum_probs=26.5
Q ss_pred CCCCCCcEEEEccCCcccCHHHHHHHHHhCCc
Q 045269 2 SDVCTSSLLVNIVRGGLLDYEAVAHYLESGHL 33 (99)
Q Consensus 2 ~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i 33 (99)
..+++|.++|+++.|...+...+.+.+.+..+
T Consensus 101 ~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~ 132 (480)
T 2zyd_A 101 PYLDKGDIIIDGGNTFFQDTIRRNRELSAEGF 132 (480)
T ss_dssp GGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred hhcCCCCEEEECCCCCHHHHHHHHHHHHHCCC
Confidence 35789999999999988888889888877544
No 109
>1su8_A CODH 2, carbon monoxide dehydrogenase 2; nickel, cluster C, oxidoreductase; HET: NFS; 1.10A {Carboxydothermus hydrogenoformans} SCOP: e.26.1.2 PDB: 1su6_A* 1su7_A* 1suf_A* 2yiv_X* 3b51_X 3b52_X 3b53_X 3i39_X
Probab=22.77 E-value=53 Score=26.14 Aligned_cols=29 Identities=14% Similarity=0.230 Sum_probs=22.5
Q ss_pred cCCcccCHHHHHHHHHhCCcceEEEecCCCCC
Q 045269 14 VRGGLLDYEAVAHYLESGHLGGLGLDVAWTEP 45 (99)
Q Consensus 14 aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep 45 (99)
+||.+ ..|.+++++|+|+|+++=|==..|
T Consensus 421 ~~g~~---~~lidaIk~G~Irg~v~vvGCdn~ 449 (636)
T 1su8_A 421 ANDPL---KPLIDNVVNGNIRGVCLFAGCNNV 449 (636)
T ss_dssp TTCTH---HHHHHHHHHTSSCCEEEECSCCCT
T ss_pred ccCch---HHHHHHHHcCCCCeEEEEecCCCC
Confidence 45654 679999999999999887754444
No 110
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=21.92 E-value=58 Score=22.00 Aligned_cols=28 Identities=21% Similarity=0.124 Sum_probs=21.7
Q ss_pred CCCCCcEEEEccCCcccCHHHHHHHHHh
Q 045269 3 DVCTSSLLVNIVRGGLLDYEAVAHYLES 30 (99)
Q Consensus 3 ~mk~~ailIN~aRg~lvd~~aL~~aL~~ 30 (99)
.+++|.++|+++....-+...+.+.+.+
T Consensus 83 ~l~~~~~vv~~s~~~~~~~~~~~~~~~~ 110 (296)
T 2gf2_A 83 KVKKGSLLIDSSTIDPAVSKELAKEVEK 110 (296)
T ss_dssp TCCTTCEEEECSCCCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEECCCCCHHHHHHHHHHHHH
Confidence 5789999999887777666677777765
No 111
>2g7o_A Protein TRAM; four helix bundle, tetramer, DNA binding protein; 1.40A {Escherichia coli} SCOP: a.241.1.1 PDB: 3d8a_A 2g9e_A
Probab=21.49 E-value=47 Score=18.78 Aligned_cols=28 Identities=21% Similarity=0.444 Sum_probs=17.3
Q ss_pred eccCCCCCcHHHHH----HHHHHHHHHHHHHH
Q 045269 60 ITPHVGGVTEHSYR----STAKVVGDVALQLH 87 (99)
Q Consensus 60 ~TPH~a~~t~~~~~----~~~~~~~~~l~~~~ 87 (99)
++||+.+.....+. .+.+.+.+.+..|+
T Consensus 33 lsp~v~~~~~fey~~mv~~Ir~~~~e~~~~FF 64 (70)
T 2g7o_A 33 LSPHVSGNSKFEYANMVEDIREKVSSEMERFF 64 (70)
T ss_dssp TCGGGTTCGGGCHHHHHHHHHHHHHHHHHHHS
T ss_pred ccHhhccCccccHHHHHHHHHHHHHHHHHHhC
Confidence 68999998744443 34444555666665
No 112
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=21.08 E-value=61 Score=21.49 Aligned_cols=21 Identities=10% Similarity=0.253 Sum_probs=18.3
Q ss_pred CHHHHHHHHHhCCcceEEEecC
Q 045269 20 DYEAVAHYLESGHLGGLGLDVA 41 (99)
Q Consensus 20 d~~aL~~aL~~g~i~gaalDV~ 41 (99)
|+++|.++|..|.+. +++|+.
T Consensus 119 ~~~~i~~~l~~GPV~-v~i~~~ 139 (221)
T 1cqd_A 119 NEQSLQKAVANQPVS-VTMDAA 139 (221)
T ss_dssp CHHHHHHHHTTSCEE-EEECCC
T ss_pred hHHHHHHHHHhCCEE-EEEecc
Confidence 799999999988886 888885
No 113
>2z16_A Matrix protein 1, M1; AIV-7M1, H5N1, structural genomics; 2.02A {Influenza a virus} PDB: 3md2_A 1ea3_A 1aa7_A
Probab=20.67 E-value=72 Score=20.66 Aligned_cols=19 Identities=26% Similarity=0.361 Sum_probs=16.1
Q ss_pred CcccCHHHHHHHHHhCCcc
Q 045269 16 GGLLDYEAVAHYLESGHLG 34 (99)
Q Consensus 16 g~lvd~~aL~~aL~~g~i~ 34 (99)
|.-.|.++|.++|+..++.
T Consensus 41 gkntDLealmEWlk~r~~l 59 (165)
T 2z16_A 41 GKNTDLEALMEWLKTRPIL 59 (165)
T ss_dssp TSCCCHHHHHHHHHHCSSC
T ss_pred ccccCHHHHHHHHhcCccc
Confidence 4457999999999999875
No 114
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}
Probab=20.53 E-value=68 Score=21.18 Aligned_cols=21 Identities=10% Similarity=0.074 Sum_probs=18.4
Q ss_pred CHHHHHHHHHhCCcceEEEecC
Q 045269 20 DYEAVAHYLESGHLGGLGLDVA 41 (99)
Q Consensus 20 d~~aL~~aL~~g~i~gaalDV~ 41 (99)
|+++|.++|..|.+. +++|+.
T Consensus 117 ~~~~i~~~l~~gPV~-v~i~~~ 137 (214)
T 2bdz_A 117 DEISLIQAIANQPVS-VVTDSR 137 (214)
T ss_dssp BHHHHHHHHHHSCEE-EEECCC
T ss_pred cHHHHHHHHHhCCEE-EEEeeC
Confidence 789999999999886 889986
No 115
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=20.44 E-value=77 Score=20.90 Aligned_cols=21 Identities=0% Similarity=0.044 Sum_probs=18.4
Q ss_pred CHHHHHHHHHhCCcceEEEecC
Q 045269 20 DYEAVAHYLESGHLGGLGLDVA 41 (99)
Q Consensus 20 d~~aL~~aL~~g~i~gaalDV~ 41 (99)
|+++|.++|..|.+. +++|+.
T Consensus 117 ~~~~i~~~l~~GPV~-v~~~~~ 137 (216)
T 1ppo_A 117 NEGNLLNAIAKQPVS-VVVESK 137 (216)
T ss_dssp CHHHHHHHHHHSCEE-EEECCC
T ss_pred CHHHHHHHHHhCCEE-EEEecC
Confidence 789999999999885 889985
No 116
>1r61_A Metal-dependent hydrolase; zinc-dependent hydrolase, structural genomics, cyclase, PSI, protein structure initiative; 2.50A {Geobacillus stearothermophilus} SCOP: c.8.8.1 PDB: 3krv_A
Probab=20.17 E-value=90 Score=20.66 Aligned_cols=42 Identities=19% Similarity=0.289 Sum_probs=30.3
Q ss_pred CCC-CcEEEEccCCc---------ccCHHHHHHHHHhCCcceEEEecCCCCCC
Q 045269 4 VCT-SSLLVNIVRGG---------LLDYEAVAHYLESGHLGGLGLDVAWTEPF 46 (99)
Q Consensus 4 mk~-~ailIN~aRg~---------lvd~~aL~~aL~~g~i~gaalDV~~~Ep~ 46 (99)
.++ ..+||+|+... -++++ ..++|.+..+++.+.|.+..|+.
T Consensus 99 i~~gd~vlirTg~~~~~~y~~~~pgls~e-aa~~L~~~~v~~vG~D~~s~d~~ 150 (207)
T 1r61_A 99 IQEGDFVLFKTKNSFEDAFHFEFIFVAED-AARYLADKQIRGVGIDALGIERA 150 (207)
T ss_dssp CCTTCEEEEECGGGGCCSCCTTCCEECHH-HHHHHHHHTCSEEECSSSCSCCS
T ss_pred CCCCcEEEEECCCCCchhhcCCCcccCHH-HHHHHHHCCCCEEEEcCCccCCC
Confidence 344 36889998432 23444 57788888999999999988875
Done!