Query 045269
Match_columns 99
No_of_seqs 161 out of 1133
Neff 7.5
Searched_HMMs 13730
Date Mon Mar 25 20:24:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045269.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/045269hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2naca1 c.2.1.4 (A:148-335) Fo 100.0 6.5E-31 4.7E-35 178.9 6.7 66 1-66 123-188 (188)
2 d1ygya1 c.2.1.4 (A:99-282) Pho 100.0 1.8E-30 1.3E-34 176.6 7.4 64 1-65 121-184 (184)
3 d1gdha1 c.2.1.4 (A:101-291) D- 100.0 2.8E-30 2.1E-34 176.6 7.5 66 1-67 126-191 (191)
4 d1mx3a1 c.2.1.4 (A:126-318) Tr 100.0 1.1E-29 7.7E-34 174.0 7.6 66 1-66 127-193 (193)
5 d1sc6a1 c.2.1.4 (A:108-295) Ph 99.9 5.4E-29 3.9E-33 169.4 5.4 66 1-66 119-188 (188)
6 d1dxya1 c.2.1.4 (A:101-299) D- 99.9 9.2E-30 6.7E-34 174.9 0.9 67 1-67 120-199 (199)
7 d1qp8a1 c.2.1.4 (A:83-263) Put 99.9 4.2E-28 3E-32 164.6 5.6 66 1-66 115-181 (181)
8 d1j4aa1 c.2.1.4 (A:104-300) D- 99.9 2.1E-28 1.5E-32 168.0 2.5 66 1-66 119-197 (197)
9 d1li4a1 c.2.1.4 (A:190-352) S- 93.8 0.0042 3.1E-07 39.9 -0.4 40 1-40 98-138 (163)
10 d2g5ca2 c.2.1.6 (A:30-200) Pre 86.5 1.9 0.00014 25.8 7.2 70 3-73 85-155 (171)
11 d2g7oa1 a.241.1.1 (A:60-127) T 85.8 0.18 1.3E-05 27.0 1.6 26 60-85 31-56 (68)
12 d1v8ba1 c.2.1.4 (A:235-397) S- 80.5 0.51 3.7E-05 29.8 2.5 26 1-26 97-123 (163)
13 d2f1ka2 c.2.1.6 (A:1-165) Prep 77.0 2.1 0.00016 25.5 4.7 65 2-67 79-144 (165)
14 d1j3ba1 c.91.1.1 (A:212-529) P 73.0 1.5 0.00011 30.3 3.4 80 5-88 207-304 (318)
15 d2olra1 c.91.1.1 (A:228-540) P 56.7 8.4 0.00061 26.2 4.7 75 6-84 207-291 (313)
16 d1l7da2 c.23.12.2 (A:1-143,A:3 55.7 4.1 0.0003 25.7 2.8 73 2-87 88-160 (194)
17 d1ii2a1 c.91.1.1 (A:201-523) P 52.5 1.7 0.00013 30.0 0.5 73 6-81 208-294 (323)
18 d1pjca1 c.2.1.4 (A:136-303) L- 49.9 2.9 0.00021 26.1 1.3 14 1-14 119-132 (168)
19 d2cvza2 c.2.1.6 (A:2-157) Hydr 46.5 11 0.0008 22.0 3.6 38 1-40 76-113 (156)
20 d1kyha_ c.72.1.4 (A:) Hypothet 46.2 11 0.00077 24.8 3.8 55 7-65 96-150 (275)
21 d1pjca2 c.23.12.2 (A:1-135,A:3 44.0 5.7 0.00041 25.0 2.0 41 1-43 81-121 (193)
22 d1xrta2 c.1.9.6 (A:56-365) Two 43.3 6.1 0.00045 25.8 2.2 23 18-40 229-251 (310)
23 d2g5gx1 c.150.1.1 (X:9-263) He 42.5 13 0.00096 24.1 3.8 33 5-37 5-37 (255)
24 d1l7da1 c.2.1.4 (A:144-326) Ni 42.1 4.6 0.00033 25.5 1.3 18 2-19 139-158 (183)
25 d2p12a1 b.175.1.1 (A:8-172) Hy 39.0 5.5 0.0004 24.8 1.3 22 13-34 105-126 (165)
26 d1mx3a2 c.23.12.1 (A:27-125,A: 38.5 32 0.0023 19.9 4.8 41 59-99 92-133 (133)
27 d1qasa3 c.1.18.1 (A:299-625) P 36.6 25 0.0018 23.4 4.6 27 16-43 23-49 (327)
28 d1gkra2 c.1.9.6 (A:55-379) L-h 36.3 6.6 0.00048 26.0 1.5 21 20-40 239-259 (325)
29 d1nbwb_ c.51.3.2 (B:) Glycerol 34.6 38 0.0028 19.4 7.1 74 10-95 34-112 (113)
30 d2ax3a1 c.72.1.4 (A:212-489) H 33.8 2.7 0.0002 27.8 -0.9 10 56-65 148-157 (278)
31 d1iwpb_ c.51.3.1 (B:) Diol deh 33.6 50 0.0037 20.5 7.0 80 10-99 61-145 (184)
32 d2okga1 c.124.1.8 (A:89-338) C 33.4 22 0.0016 22.6 3.7 38 53-90 17-54 (250)
33 d1r61a_ c.8.8.1 (A:) Unnamed p 30.2 19 0.0014 22.3 2.9 38 8-46 104-150 (205)
34 d1ynya2 c.1.9.6 (A:53-384) D-h 28.4 10 0.00074 25.2 1.3 23 18-40 242-264 (332)
35 d2fvka2 c.1.9.6 (A:57-440) Dih 27.1 15 0.0011 25.1 2.1 21 20-40 283-303 (384)
36 d1otfa_ d.80.1.1 (A:) 4-oxaloc 24.6 39 0.0029 16.4 3.2 24 65-88 9-32 (59)
37 d1odma_ b.82.2.1 (A:) Isopenic 24.4 24 0.0018 22.9 2.7 24 5-36 243-266 (329)
38 d2d0ob1 c.51.3.2 (B:5-112) Dio 23.9 61 0.0044 18.3 6.9 71 11-93 34-108 (108)
39 d1nfga2 c.1.9.6 (A:52-381) D-h 23.6 16 0.0012 24.1 1.7 23 19-41 242-264 (330)
40 d1wuda1 a.60.8.1 (A:530-606) H 22.7 50 0.0037 16.9 4.1 27 64-90 51-77 (77)
41 d1wxma1 d.15.1.5 (A:8-80) A-Ra 20.3 47 0.0034 17.4 2.9 38 4-42 7-45 (73)
No 1
>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}
Probab=99.96 E-value=6.5e-31 Score=178.94 Aligned_cols=66 Identities=35% Similarity=0.495 Sum_probs=64.6
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCCccccCCceEeccCCCC
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPNDPILKFQSVLITPHVGG 66 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~~l~~~~nvi~TPH~a~ 66 (99)
|++||+|++|||+|||++||++||+++|++|++.||++|||++||++.++||+++||+++|||+||
T Consensus 123 l~~mk~ga~lIN~aRG~ivd~~aL~~aL~~g~i~ga~lDV~~~EP~~~~~~l~~~~nv~~TPHiaG 188 (188)
T d2naca1 123 LKLFKRGAYIVNTARGKLCDRDAVARALESGRLAGYAGDVWFPQPAPKDHPWRTMPYNGMTPHISG 188 (188)
T ss_dssp HTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCTT
T ss_pred HHhCCCCCEEEecCchhhhhHHHHHHHHhCCCceeEEEeCCCCCCCCCCChHHcCCCeEEccccCc
Confidence 579999999999999999999999999999999999999999999999999999999999999997
No 2
>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.96 E-value=1.8e-30 Score=176.57 Aligned_cols=64 Identities=38% Similarity=0.710 Sum_probs=61.8
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCCccccCCceEeccCCC
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPNDPILKFQSVLITPHVG 65 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~~l~~~~nvi~TPH~a 65 (99)
|++||+|++|||+|||++|||+||++||++|+|+||++|||++||++ ++|||++|||++|||+|
T Consensus 121 l~~mk~~a~lIN~sRG~iVde~aL~~aL~~~~i~~a~lDV~~~EP~~-~~~l~~~~nviiTPHIG 184 (184)
T d1ygya1 121 LAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCT-DSPLFELAQVVVTPHLG 184 (184)
T ss_dssp HTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSCS-CCGGGGCTTEEECSSCS
T ss_pred HhhhCCCceEEEecchhhhhhHHHHHHHhcCcEeEEEEeCCCCCCCC-CchHhcCCCEEECCCCC
Confidence 57999999999999999999999999999999999999999999984 89999999999999997
No 3
>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}
Probab=99.96 E-value=2.8e-30 Score=176.62 Aligned_cols=66 Identities=32% Similarity=0.544 Sum_probs=63.2
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCCccccCCceEeccCCCCC
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPNDPILKFQSVLITPHVGGV 67 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~~l~~~~nvi~TPH~a~~ 67 (99)
|++||+|++|||+|||++|||+||+++|++|++.||++|||++|| +.++|||++|||++|||+|++
T Consensus 126 l~~mk~~a~lIN~sRG~ivde~aL~~aL~~g~i~~a~lDV~~~EP-~~~~~l~~~~nvi~TPHiasa 191 (191)
T d1gdha1 126 IKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDVFAGEP-NINEGYYDLPNTFLFPHIGSA 191 (191)
T ss_dssp HTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTT-SCCTTGGGCTTEEECSSCTTC
T ss_pred hhCcCCccEEEecCCccchhhHHHHHHHHcCCceEEEEECCCCCC-CCCchHHcCCCEEECCccccC
Confidence 579999999999999999999999999999999999999999999 578999999999999999974
No 4
>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}
Probab=99.96 E-value=1.1e-29 Score=174.05 Aligned_cols=66 Identities=35% Similarity=0.611 Sum_probs=63.1
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCC-CCCccccCCceEeccCCCC
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFD-PNDPILKFQSVLITPHVGG 66 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~-~~~~l~~~~nvi~TPH~a~ 66 (99)
|++||+|++|||+|||++||++||+++|++|++.||++|||+.||++ .++||+++|||++|||+|+
T Consensus 127 l~~mk~~a~lIN~sRG~ivde~aL~~aL~~~~i~~a~lDV~~~EP~~~~~~~l~~~~nvi~TPHiA~ 193 (193)
T d1mx3a1 127 VKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAW 193 (193)
T ss_dssp HTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTSSTTTTCSSEEECSSCTT
T ss_pred HhccCCCCeEEecCCceEEcHHHHHHHHHcCCceEEEEEcCCCCCCCCCchhHHcCCCEEEcCCcCc
Confidence 57999999999999999999999999999999999999999999986 5789999999999999986
No 5
>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}
Probab=99.95 E-value=5.4e-29 Score=169.36 Aligned_cols=66 Identities=44% Similarity=0.668 Sum_probs=56.2
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCC----CCCCccccCCceEeccCCCC
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPF----DPNDPILKFQSVLITPHVGG 66 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~----~~~~~l~~~~nvi~TPH~a~ 66 (99)
|++||+|++|||+|||++||++||+++|++|++.||++|||++||. +..+||+++|||++|||+||
T Consensus 119 l~~mk~~a~lIN~aRG~lvde~aL~~aL~~~~~~~a~lDV~~~EP~~~~~~~~~~l~~~~nv~~TPHiaG 188 (188)
T d1sc6a1 119 ISLMKPGSLLINASRGTVVDIPALADALASKHLAGAAIDVFPTEPATNSDPFTSPLAEFDNVLLTPHIGG 188 (188)
T ss_dssp HHHSCTTEEEEECSCSSSBCHHHHHHHHHTTSEEEEEEEC---------CTTTGGGTTCTTEEEECCCSC
T ss_pred HhhCCCCCEEEEcCcHHhhhhHHHHHHHHcCCceEEEEecCCCCCCCcCCccchhHhcCCCEEEcCCcCc
Confidence 4689999999999999999999999999999999999999999998 34568999999999999997
No 6
>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}
Probab=99.95 E-value=9.2e-30 Score=174.88 Aligned_cols=67 Identities=28% Similarity=0.456 Sum_probs=61.3
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCC-------------CCCccccCCceEeccCCCCC
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFD-------------PNDPILKFQSVLITPHVGGV 67 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~-------------~~~~l~~~~nvi~TPH~a~~ 67 (99)
|++||+|++|||+|||++||++||+++|++|+|.||++|||+.||.+ ..++|+++|||++|||+|||
T Consensus 120 l~~mk~~a~lIN~aRG~vvde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~~~~~~~~~~p~~~~L~~~~nviiTPHiagy 199 (199)
T d1dxya1 120 FNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDTYEYETEDLLNLAKHGSFKDPLWDELLGMPNVVLSPHIAYY 199 (199)
T ss_dssp HHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEESSCTTHHHHHHHHHHHSSCCCHHHHHHHTCTTEEECSSCTTC
T ss_pred hhccCCceEEEecccHhhhhhHHHHHHHhcCCcceEeccccCCCCcchhhccccccccChhhHHHhcCCCEEECCccccC
Confidence 46899999999999999999999999999999999999999999952 22468889999999999996
No 7
>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=99.94 E-value=4.2e-28 Score=164.58 Aligned_cols=66 Identities=24% Similarity=0.405 Sum_probs=62.2
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCC-CCCCCCccccCCceEeccCCCC
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTE-PFDPNDPILKFQSVLITPHVGG 66 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~E-p~~~~~~l~~~~nvi~TPH~a~ 66 (99)
|++||+|++|||+|||++||++||+++|++|++.||++|||+.| |++.++||+++|||++|||+||
T Consensus 115 l~~mk~~ailIN~~RG~ivd~~aL~~aL~~~~i~~aalDV~~~e~p~~~~~~l~~~~nvi~TPHiaG 181 (181)
T d1qp8a1 115 LALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVWWGRNDFAKDAEFFSLPNVVATPWVAG 181 (181)
T ss_dssp HTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTCCGGGHHHHTSTTEEECCSCSS
T ss_pred eeeccccceEEeccccccccchhhhhhcccCcEEEEEEecCCCCCCCCCCChHHcCCCEEeccccCc
Confidence 57999999999999999999999999999999999999999865 5678889999999999999997
No 8
>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}
Probab=99.94 E-value=2.1e-28 Score=168.03 Aligned_cols=66 Identities=29% Similarity=0.373 Sum_probs=60.2
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCC-------------CCCCccccCCceEeccCCCC
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPF-------------DPNDPILKFQSVLITPHVGG 66 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~-------------~~~~~l~~~~nvi~TPH~a~ 66 (99)
|++||+|++|||+|||++||++||+++|++|+++||++|||++||. +.++|||++|||++|||+|+
T Consensus 119 l~~mk~~a~lIN~sRG~ivde~aL~~aL~~~~i~~a~lDV~~~Ep~~~~~~~~~~~~p~~~~~~L~~~~nviiTPHiA~ 197 (197)
T d1j4aa1 119 IAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDVYEGEVGIFNEDWEGKEFPDARLADLIARPNVLVTPKTAF 197 (197)
T ss_dssp HHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTCTTTTTSBCTTSCCSCHHHHHHHHCTTEEECSSCTT
T ss_pred HhhhCCccEEEecCchhhhhhHHHHHHHhcccchheeeeccccCCcccccccccccCCccchhhhhcCCCEEeCcccCc
Confidence 4689999999999999999999999999999999999999999964 23357899999999999986
No 9
>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.85 E-value=0.0042 Score=39.87 Aligned_cols=40 Identities=10% Similarity=-0.046 Sum_probs=29.1
Q ss_pred CCCCCCCcEEEEcc-CCcccCHHHHHHHHHhCCcceEEEec
Q 045269 1 MSDVCTSSLLVNIV-RGGLLDYEAVAHYLESGHLGGLGLDV 40 (99)
Q Consensus 1 l~~mk~~ailIN~a-Rg~lvd~~aL~~aL~~g~i~gaalDV 40 (99)
|++||+|++|.|++ +..-||.++|.+...+.+.....+|.
T Consensus 98 ~~~MKdgaIL~N~Ghfd~EId~~~L~~~~~~~~~v~~~v~~ 138 (163)
T d1li4a1 98 FEQMKDDAIVCNIGHFDVEIDVKWLNENAVEKVNIKPQVDR 138 (163)
T ss_dssp HTTCCTTEEEEECSSSTTSBCHHHHHHHCSEEEEEETTEEE
T ss_pred HHhccCCeEEEEeccccceecHHHHhhccceeeeecCCeeE
Confidence 57999999999985 88999999988755443333333444
No 10
>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}
Probab=86.49 E-value=1.9 Score=25.80 Aligned_cols=70 Identities=10% Similarity=0.007 Sum_probs=46.4
Q ss_pred CCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCC-CCCCCCCccccCCceEeccCCCCCcHHHHH
Q 045269 3 DVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWT-EPFDPNDPILKFQSVLITPHVGGVTEHSYR 73 (99)
Q Consensus 3 ~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~-Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~~ 73 (99)
.++++.+++.++....--.+++.+.+...-+.+--+..-+. .|...+..|++-..+++|||-.. +.+..+
T Consensus 85 ~~~~~~ii~d~~s~k~~~~~~~~~~~~~~~i~~hPm~G~e~sG~~~a~~~Lf~g~~~il~p~~~~-~~~~~~ 155 (171)
T d2g5ca2 85 ILSEDATVTDQGSVKGKLVYDLENILGKRFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKT-DKKRLK 155 (171)
T ss_dssp HSCTTCEEEECCSCCTHHHHHHHHHHGGGEECEEEECCCSCCSGGGCCSSTTTTCEEEECCCSSS-CHHHHH
T ss_pred cccccccccccccccHHHHHHHHHhhcccccccccccccccccHHHHHHHhhCCCeEEEecCCCC-CHHHHH
Confidence 36788999999886655566677777665555555555433 24344566888889999999663 444443
No 11
>d2g7oa1 a.241.1.1 (A:60-127) TraM {Escherichia coli [TaxId: 562]}
Probab=85.78 E-value=0.18 Score=27.05 Aligned_cols=26 Identities=19% Similarity=0.464 Sum_probs=20.0
Q ss_pred eccCCCCCcHHHHHHHHHHHHHHHHH
Q 045269 60 ITPHVGGVTEHSYRSTAKVVGDVALQ 85 (99)
Q Consensus 60 ~TPH~a~~t~~~~~~~~~~~~~~l~~ 85 (99)
+|||++|...-.+..|.+.+.+.+..
T Consensus 31 lSPHvsgnpkfe~~~mv~~I~e~vs~ 56 (68)
T d2g7oa1 31 LSPHVSGNSKFEYANMVEDIREKVSS 56 (68)
T ss_dssp TCGGGTTCGGGCHHHHHHHHHHHHHH
T ss_pred cCcccCCCcchhHHHHHHHHHHHHHH
Confidence 68999999988777777777665443
No 12
>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}
Probab=80.47 E-value=0.51 Score=29.75 Aligned_cols=26 Identities=8% Similarity=0.056 Sum_probs=20.7
Q ss_pred CCCCCCCcEEEEccCCc-ccCHHHHHH
Q 045269 1 MSDVCTSSLLVNIVRGG-LLDYEAVAH 26 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~-lvd~~aL~~ 26 (99)
|++||+|+++-|+++-. =||-++|.+
T Consensus 97 ~~~MKdgaIl~N~GHfd~EIdv~~L~~ 123 (163)
T d1v8ba1 97 LLKMKNNAVVGNIGHFDDEIQVNELFN 123 (163)
T ss_dssp HTTCCTTCEEEECSSTTTSBCHHHHHT
T ss_pred HHHhhCCeEEEeccccchhhhhHHHHh
Confidence 57899999999999886 457766654
No 13
>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=77.00 E-value=2.1 Score=25.49 Aligned_cols=65 Identities=14% Similarity=0.118 Sum_probs=33.7
Q ss_pred CCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCC-CCCCCCCCccccCCceEeccCCCCC
Q 045269 2 SDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAW-TEPFDPNDPILKFQSVLITPHVGGV 67 (99)
Q Consensus 2 ~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~-~Ep~~~~~~l~~~~nvi~TPH~a~~ 67 (99)
..++++.++++++-...-.... .+.+...-+..-.+...+ ..|......|+....+++||+-++.
T Consensus 79 ~~l~~~~iv~~~~s~~~~~~~~-~~~~~~~~~~~h~~~~~~~~g~~~a~~~l~~~~~~il~~~~~~~ 144 (165)
T d2f1ka2 79 PHLSPTAIVTDVASVKTAIAEP-ASQLWSGFIGGHPMAGTAAQGIDGAEENLFVNAPYVLTPTEYTD 144 (165)
T ss_dssp GGSCTTCEEEECCSCCHHHHHH-HHHHSTTCEEEEECCCCSCSSGGGCCTTTTTTCEEEEEECTTCC
T ss_pred hhcccccceeeccccchHHHHH-HHHhhcccccceeeecccccchhhhcccccCCCeEEEEeCCCCC
Confidence 3578999999997554322222 233333222222222111 1122234456777788999986643
No 14
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]}
Probab=73.05 E-value=1.5 Score=30.30 Aligned_cols=80 Identities=19% Similarity=0.146 Sum_probs=49.6
Q ss_pred CCCcEEEEcc----------CCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCC--c--cccCCceEeccCCCCCcHH
Q 045269 5 CTSSLLVNIV----------RGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPND--P--ILKFQSVLITPHVGGVTEH 70 (99)
Q Consensus 5 k~~ailIN~a----------Rg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~--~--l~~~~nvi~TPH~a~~t~~ 70 (99)
+..++||||+ |-.|=...++++|+.+|.+..+- |...|. ..- | +-..|.=++.|.-.|...+
T Consensus 207 ~~~~~LvNTGW~Gg~yg~G~Ri~l~~TR~ii~aIl~G~l~~~e---~~~d~~-Fgl~IP~~v~gV~~~iL~Pr~~W~d~~ 282 (318)
T d1j3ba1 207 APRVYLVNTGWTGGPYGVGYRFPLPVTRALLKAALSGALENVP---YRRDPV-FGFEVPLEAPGVPQELLNPRETWADKE 282 (318)
T ss_dssp CCEEEEEECSEESSSTTTSEECCHHHHHHHHHHHHHTGGGGSC---EEECTT-TCCEEESCBTTBCGGGGCGGGGSSCHH
T ss_pred CCcEEEEeccccccccccCCcCCchhhHHHHHHHHcCcccccc---eEEcCC-CCeeccccCCCCChHhCCHhHhcCCHH
Confidence 4467999995 44455666999999999886321 111221 110 1 1233444799999998888
Q ss_pred HHHHHHH----HHHHHHHHHHc
Q 045269 71 SYRSTAK----VVGDVALQLHA 88 (99)
Q Consensus 71 ~~~~~~~----~~~~~l~~~~~ 88 (99)
++++.++ .+.+|+++|..
T Consensus 283 ~Yd~~a~~L~~~F~eNFkkf~~ 304 (318)
T d1j3ba1 283 AYDQQARKLARLFQENFQKYAS 304 (318)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHhcc
Confidence 7765544 44567777653
No 15
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]}
Probab=56.74 E-value=8.4 Score=26.24 Aligned_cols=75 Identities=16% Similarity=0.256 Sum_probs=46.7
Q ss_pred CCcEEEEcc------CCcccCHHHHHHHHHhCCcce---EEEecCCCC-CCCCCCccccCCceEeccCCCCCcHHHHHHH
Q 045269 6 TSSLLVNIV------RGGLLDYEAVAHYLESGHLGG---LGLDVAWTE-PFDPNDPILKFQSVLITPHVGGVTEHSYRST 75 (99)
Q Consensus 6 ~~ailIN~a------Rg~lvd~~aL~~aL~~g~i~g---aalDV~~~E-p~~~~~~l~~~~nvi~TPH~a~~t~~~~~~~ 75 (99)
-.++||||+ |=.|-...++++|+.+|.+.- .-.++|--+ | . .+-..|.=++.|.-.|...+++++.
T Consensus 207 ~~v~LvNTGw~G~G~Ri~l~~TR~ii~ai~~G~l~~~e~~~dp~Fgl~IP--~--~~~GV~~~iLnPr~tW~d~~~Yd~~ 282 (313)
T d2olra1 207 AQAYLVNTGWNGTGKRISIKDTRAIIDAILNGSLDNAETFTLPMFNLAIP--T--ELPGVDTKILDPRNTYASPEQWQEK 282 (313)
T ss_dssp CEEEEEECSBCTTSSBCCHHHHHHHHHHHHHTHHHHSCEEEETTTTEEEE--S--CCTTSCGGGGSGGGGSSSHHHHHHH
T ss_pred CcEEEEeccccCCCCcCCHHHHHHHHHHHHhccccccceEeccccceeee--e--ecCCCChhhcCHhhhcCCHHHHHHH
Confidence 457999997 334557889999999998841 111122111 1 1 1223455578899999988888666
Q ss_pred HHHHHHHHH
Q 045269 76 AKVVGDVAL 84 (99)
Q Consensus 76 ~~~~~~~l~ 84 (99)
++.+++...
T Consensus 283 a~~La~~F~ 291 (313)
T d2olra1 283 AETLAKLFI 291 (313)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555554333
No 16
>d1l7da2 c.23.12.2 (A:1-143,A:327-377) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}
Probab=55.69 E-value=4.1 Score=25.75 Aligned_cols=73 Identities=7% Similarity=0.044 Sum_probs=46.0
Q ss_pred CCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCCccccCCceEeccCCCCCcHHHHHHHHHHHHH
Q 045269 2 SDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPNDPILKFQSVLITPHVGGVTEHSYRSTAKVVGD 81 (99)
Q Consensus 2 ~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~~~~~~~~~~ 81 (99)
++||+|+++|..-- .....+++++|.+.++..+++|.... -+.=.+ -|-++.++.-+-.+.....++
T Consensus 88 ~~lk~g~~li~~l~--p~~~~~~~~~l~~~~it~~a~e~ipR-----israQ~------md~Lssqa~iaG~~a~~~~a~ 154 (194)
T d1l7da2 88 ALIKEGAVLMCHLG--ALTNRPVVEALTKRKITAYAMELMPR-----ISRAQS------MDILSSQSNLVAADASPLFAK 154 (194)
T ss_dssp GGSCTTCEEEEECC--GGGCHHHHHHHHHTTCEEEEGGGCCC-----SGGGGG------GCHHHHHHHHGHHHHHHHHHH
T ss_pred hhccCceEEEEecc--cccchhHHHHHHhcCceEEeeecccc-----cCCCCc------cCCcCcchhhhhHhHHHHHHH
Confidence 57999999998654 44567899999999999999887521 110011 122232333333556666777
Q ss_pred HHHHHH
Q 045269 82 VALQLH 87 (99)
Q Consensus 82 ~l~~~~ 87 (99)
++-.|+
T Consensus 155 ~l~~~~ 160 (194)
T d1l7da2 155 NLLNFL 160 (194)
T ss_dssp HHHHHH
T ss_pred HHHhhh
Confidence 777766
No 17
>d1ii2a1 c.91.1.1 (A:201-523) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Trypanosoma cruzi [TaxId: 5693]}
Probab=52.49 E-value=1.7 Score=30.01 Aligned_cols=73 Identities=16% Similarity=0.078 Sum_probs=44.9
Q ss_pred CCcEEEEcc-----------CCcccCHHHHHHHHHhCCcceE--EEe-cCCCCCCCCCCccccCCceEeccCCCCCcHHH
Q 045269 6 TSSLLVNIV-----------RGGLLDYEAVAHYLESGHLGGL--GLD-VAWTEPFDPNDPILKFQSVLITPHVGGVTEHS 71 (99)
Q Consensus 6 ~~ailIN~a-----------Rg~lvd~~aL~~aL~~g~i~ga--alD-V~~~Ep~~~~~~l~~~~nvi~TPH~a~~t~~~ 71 (99)
-.++||||+ |=.|=...++++|+.+|.+..+ --| +|--+ .|.. +-..|.=++.|...|...++
T Consensus 208 ~~~~LvNTGw~GG~yg~g~~Ri~l~~TR~iI~ail~G~L~~~e~~~dp~Fgl~-IP~~--~~gVp~~iLnPr~tW~d~~~ 284 (323)
T d1ii2a1 208 SRVWLLNTGYAGGRADRGAKRMPLRVTRAIIDAIHDGTLDRTEYEEYPGWGLH-IPKY--VAKVPEHLLNPRKAWKDVRQ 284 (323)
T ss_dssp CEEEEEECSEESSCGGGTCEECCHHHHHHHHHHHHSSSGGGSCEEEETTTTEE-EESC--CTTSCHHHHSHHHHCSCHHH
T ss_pred ccEEEEeccccccccCCCCcccChHHHHHHHHHHHhCCccccCeEECCCCCEe-ccCc--CCCCChHhcCHhhhcCCHHH
Confidence 457999996 2244566799999999998521 111 11100 0111 22345558999999998888
Q ss_pred HHHHHHHHHH
Q 045269 72 YRSTAKVVGD 81 (99)
Q Consensus 72 ~~~~~~~~~~ 81 (99)
+++.++.+++
T Consensus 285 Yd~~a~~La~ 294 (323)
T d1ii2a1 285 FNETSKELVA 294 (323)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8666555544
No 18
>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}
Probab=49.89 E-value=2.9 Score=26.10 Aligned_cols=14 Identities=21% Similarity=0.491 Sum_probs=11.9
Q ss_pred CCCCCCCcEEEEcc
Q 045269 1 MSDVCTSSLLVNIV 14 (99)
Q Consensus 1 l~~mk~~ailIN~a 14 (99)
++.||||+++|-+|
T Consensus 119 v~~Mk~GSVIVDva 132 (168)
T d1pjca1 119 VEQMRTGSVIVDVA 132 (168)
T ss_dssp HTTSCTTCEEEETT
T ss_pred HhhcCCCcEEEEee
Confidence 36899999999886
No 19
>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}
Probab=46.54 E-value=11 Score=22.04 Aligned_cols=38 Identities=16% Similarity=0.102 Sum_probs=31.4
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEec
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDV 40 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV 40 (99)
++.++++.++|+++-...=....+.+.+++..+. .+|.
T Consensus 76 ~~~~~~~~~iid~sT~~p~~~~~~~~~~~~~gi~--~lda 113 (156)
T d2cvza2 76 YPYLREGTYWVDATSGEPEASRRLAERLREKGVT--YLDA 113 (156)
T ss_dssp TTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEE--EEEC
T ss_pred cccccccccccccccCCHHHHHHHHHHHHHcCCe--EEec
Confidence 3578999999999998888888899999887664 6676
No 20
>d1kyha_ c.72.1.4 (A:) Hypothetical protein YxkO {Bacillus subtilis [TaxId: 1423]}
Probab=46.23 E-value=11 Score=24.82 Aligned_cols=55 Identities=13% Similarity=0.045 Sum_probs=26.5
Q ss_pred CcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCCCCCCCCCccccCCceEeccCCC
Q 045269 7 SSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWTEPFDPNDPILKFQSVLITPHVG 65 (99)
Q Consensus 7 ~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~~~~~~l~~~~nvi~TPH~a 65 (99)
++++|-.+=|.-=....+++.+.+... -..+|--.-... .......++|+|||.+
T Consensus 96 ~~~~iGpGlg~~~~~~~~~~~l~~~~~-p~VlDAdal~~~---~~~~~~~~~IiTPH~g 150 (275)
T d1kyha_ 96 RAIAIGPGLPQTESVQQAVDHVLTADC-PVILDAGALAKR---TYPKREGPVILTPHPG 150 (275)
T ss_dssp SEEEECTTCCSSHHHHHHHHHHTTSSS-CEEECGGGCCSC---CCCCCSSCEEECCCHH
T ss_pred ceEEEeccccchHHHHHHHHHHhhccC-ceeehhhhhhhh---hcccccCceEecccHH
Confidence 455554443322222345555544433 367775322211 1111235789999976
No 21
>d1pjca2 c.23.12.2 (A:1-135,A:304-361) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}
Probab=44.01 E-value=5.7 Score=25.01 Aligned_cols=41 Identities=10% Similarity=0.011 Sum_probs=32.2
Q ss_pred CCCCCCCcEEEEccCCcccCHHHHHHHHHhCCcceEEEecCCC
Q 045269 1 MSDVCTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWT 43 (99)
Q Consensus 1 l~~mk~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~ 43 (99)
+++||+|.++|-.-.. ....+++++|.+.++..+++|....
T Consensus 81 ~~~lk~~~~li~~l~p--~~~~ell~~l~~~~it~~s~E~ipr 121 (193)
T d1pjca2 81 YDLMQKDQLLFTYLHL--AAARELTEQLMRVGLTAIAYETVEL 121 (193)
T ss_dssp GGGCCTTCEEEECCCG--GGCHHHHHHHHHHTCEEEEGGGCCC
T ss_pred HHhhhcCceEEEecCc--ccchHHHHHHHHcCCEEEEeeeccc
Confidence 3579999999877654 3346899999999999999988643
No 22
>d1xrta2 c.1.9.6 (A:56-365) Two-domain dihydroorotase {Aquifex aeolicus [TaxId: 63363]}
Probab=43.31 E-value=6.1 Score=25.82 Aligned_cols=23 Identities=17% Similarity=0.104 Sum_probs=19.0
Q ss_pred ccCHHHHHHHHHhCCcceEEEec
Q 045269 18 LLDYEAVAHYLESGHLGGLGLDV 40 (99)
Q Consensus 18 lvd~~aL~~aL~~g~i~gaalDV 40 (99)
-=|.++|.++|++|.|.-.+.|=
T Consensus 229 ~~d~~aL~~al~~G~id~i~SDH 251 (310)
T d1xrta2 229 KEDRLALIEGVKRGIIDCFATDH 251 (310)
T ss_dssp -CCHHHHHHHHHHTCSCEECCCB
T ss_pred HHHHHHHHHHHhcCCCeEEecCC
Confidence 34899999999999998777775
No 23
>d2g5gx1 c.150.1.1 (X:9-263) Heme transport protein ChaN {Campylobacter jejuni [TaxId: 197]}
Probab=42.53 E-value=13 Score=24.07 Aligned_cols=33 Identities=12% Similarity=0.097 Sum_probs=28.1
Q ss_pred CCCcEEEEccCCcccCHHHHHHHHHhCCcceEE
Q 045269 5 CTSSLLVNIVRGGLLDYEAVAHYLESGHLGGLG 37 (99)
Q Consensus 5 k~~ailIN~aRg~lvd~~aL~~aL~~g~i~gaa 37 (99)
++...++++..|..++.++|++.|.+..+.-.|
T Consensus 5 ~~~~~i~~~~~~~~is~~~l~~~l~~advVllG 37 (255)
T d2g5gx1 5 NKDFYILDTHTQKKISFEDMILELLKADVILLG 37 (255)
T ss_dssp TTTEEEEETTTTEECCHHHHHHHHTTCSEEEEE
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHhcCCEEEEC
Confidence 456789999999999999999999888876444
No 24
>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}
Probab=42.13 E-value=4.6 Score=25.51 Aligned_cols=18 Identities=17% Similarity=0.453 Sum_probs=14.4
Q ss_pred CCCCCCcEEEEcc--CCccc
Q 045269 2 SDVCTSSLLVNIV--RGGLL 19 (99)
Q Consensus 2 ~~mk~~ailIN~a--Rg~lv 19 (99)
+.||||+++|-+| .|+.+
T Consensus 139 ~~Mk~GSVIVDvaidqGGn~ 158 (183)
T d1l7da1 139 TKMKPGSVIIDLAVEAGGNC 158 (183)
T ss_dssp TTSCTTCEEEETTGGGTCSS
T ss_pred HhcCCCcEEEEEeecCCCcc
Confidence 6899999999885 55554
No 25
>d2p12a1 b.175.1.1 (A:8-172) Hypothetical protein RHA1_ro00977 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=39.04 E-value=5.5 Score=24.80 Aligned_cols=22 Identities=23% Similarity=0.202 Sum_probs=18.4
Q ss_pred ccCCcccCHHHHHHHHHhCCcc
Q 045269 13 IVRGGLLDYEAVAHYLESGHLG 34 (99)
Q Consensus 13 ~aRg~lvd~~aL~~aL~~g~i~ 34 (99)
-+.-.++|++.|.+|+++|.|.
T Consensus 105 ~g~~~ilD~DEL~~A~~~GlIs 126 (165)
T d2p12a1 105 GRDTELLDVDELMEAHTTGLLD 126 (165)
T ss_dssp TTEEEEECHHHHHHHHHTTSSC
T ss_pred CCceEEecHHHHHHHHHcCCCC
Confidence 3455789999999999999874
No 26
>d1mx3a2 c.23.12.1 (A:27-125,A:319-352) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}
Probab=38.53 E-value=32 Score=19.91 Aligned_cols=41 Identities=12% Similarity=-0.006 Sum_probs=27.3
Q ss_pred EeccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCc-ccccC
Q 045269 59 LITPHVGGVTEHSYRSTAKVVGDVALQLHAGTPLTG-IEPVN 99 (99)
Q Consensus 59 i~TPH~a~~t~~~~~~~~~~~~~~l~~~~~g~~~~~-~~~~n 99 (99)
.-+|..+..+-|..-.+.-.+.+++.+-++|+-+.. .+|||
T Consensus 92 ~n~p~~~~~vAE~a~~lil~~~R~i~~a~~g~~~~~~~n~~~ 133 (133)
T d1mx3a2 92 CNVPAASVYSEQASIEMREEAAREIRRAITGRIPDSLKNCVN 133 (133)
T ss_dssp ECCCSTTHCCHHHHHHHHHHHHHHHHHHHHSCTTTTCSSBCC
T ss_pred EcCCCCCchhHHHHHHHHHHHHhhHHHHHhccccchhhcccC
Confidence 345554444555555555667788888889986665 68887
No 27
>d1qasa3 c.1.18.1 (A:299-625) Phospholipase C isozyme D1 (PLC-D1) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=36.57 E-value=25 Score=23.38 Aligned_cols=27 Identities=30% Similarity=0.094 Sum_probs=22.2
Q ss_pred CcccCHHHHHHHHHhCCcceEEEecCCC
Q 045269 16 GGLLDYEAVAHYLESGHLGGLGLDVAWT 43 (99)
Q Consensus 16 g~lvd~~aL~~aL~~g~i~gaalDV~~~ 43 (99)
.+-++.+++.++|+.| .+..=||||+.
T Consensus 23 ~~~ss~~~~~~~l~~G-~R~ielD~w~g 49 (327)
T d1qasa3 23 TGPSSTEAYIRALCKG-CRCLELDCWDG 49 (327)
T ss_dssp SCCBCHHHHHHHHHTT-CCEEEEEEECC
T ss_pred cCcccHHHHHHHHHhC-CcEEEEEeecC
Confidence 3456799999999998 55699999984
No 28
>d1gkra2 c.1.9.6 (A:55-379) L-hydantoinase {Arthrobacter aurescens [TaxId: 43663]}
Probab=36.28 E-value=6.6 Score=25.95 Aligned_cols=21 Identities=29% Similarity=0.246 Sum_probs=17.9
Q ss_pred CHHHHHHHHHhCCcceEEEec
Q 045269 20 DYEAVAHYLESGHLGGLGLDV 40 (99)
Q Consensus 20 d~~aL~~aL~~g~i~gaalDV 40 (99)
|.++|.++|++|.|.-.+.|=
T Consensus 239 Dr~aL~~al~~G~id~i~SDH 259 (325)
T d1gkra2 239 MNIRLWEQLENGLIDTLGSDH 259 (325)
T ss_dssp HHHHHHHHHHHTCCCEECCCE
T ss_pred hhHHHHHHHhcCcceEEecCC
Confidence 789999999999998666664
No 29
>d1nbwb_ c.51.3.2 (B:) Glycerol dehydratase reactivase, beta subunit {Klebsiella pneumoniae [TaxId: 573]}
Probab=34.63 E-value=38 Score=19.41 Aligned_cols=74 Identities=18% Similarity=0.110 Sum_probs=49.7
Q ss_pred EEEccCCcccCHHHHHHHHHhCCcceEEEecC-----CCCCCCCCCccccCCceEeccCCCCCcHHHHHHHHHHHHHHHH
Q 045269 10 LVNIVRGGLLDYEAVAHYLESGHLGGLGLDVA-----WTEPFDPNDPILKFQSVLITPHVGGVTEHSYRSTAKVVGDVAL 84 (99)
Q Consensus 10 lIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~-----~~Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~~~~~~~~~~~l~ 84 (99)
+|-+-+..-+-.-|...|..|+--.|.++|-- ...-++++.||+. .+|.. +.+.++.++ .|--
T Consensus 34 ~v~~~~~~d~~~lA~~AA~~S~lgVGIGi~~~g~~vih~k~L~~~~pLf~-----~~~~~---~~~~~R~iG----~NAA 101 (113)
T d1nbwb_ 34 TITYDGGGDAAALGALAARSSPLRVGIGLSASGEIALTHAQLPADAPLAT-----GHVTD---SDDQLRTLG----ANAG 101 (113)
T ss_dssp EEECTTCCCHHHHHHHHHHHCTTSEEEEECTTSEEEEEETTSCTTCCSEE-----EETTS---CHHHHHHHH----HHHH
T ss_pred EEEecCCCCHHHHHHHHHHhCCCceeEEEcCCCcEEEEccCCCCCCcccc-----cCccC---CHHHHHHHH----HHHH
Confidence 56667777677788889999999999999853 2234445556554 55553 566665555 4556
Q ss_pred HHHcCCCCCcc
Q 045269 85 QLHAGTPLTGI 95 (99)
Q Consensus 85 ~~~~g~~~~~~ 95 (99)
++.+|-|++..
T Consensus 102 RlvKg~Pf~~~ 112 (113)
T d1nbwb_ 102 QLVKVLPLSER 112 (113)
T ss_dssp HHHHTCCCCCC
T ss_pred HHHhcCCCccC
Confidence 67888887653
No 30
>d2ax3a1 c.72.1.4 (A:212-489) Hypothetical protein TM0922, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=33.83 E-value=2.7 Score=27.81 Aligned_cols=10 Identities=40% Similarity=0.873 Sum_probs=8.2
Q ss_pred CceEeccCCC
Q 045269 56 QSVLITPHVG 65 (99)
Q Consensus 56 ~nvi~TPH~a 65 (99)
.++|+|||.+
T Consensus 148 ~~~IlTPH~g 157 (278)
T d2ax3a1 148 SPAVLTPHPG 157 (278)
T ss_dssp SCEEECCCHH
T ss_pred CCEEeCCCHh
Confidence 3689999966
No 31
>d1iwpb_ c.51.3.1 (B:) Diol dehydratase, beta subunit {Klebsiella pneumoniae [TaxId: 573]}
Probab=33.59 E-value=50 Score=20.51 Aligned_cols=80 Identities=23% Similarity=0.243 Sum_probs=51.1
Q ss_pred EEEccCCcccCHHHHHHHHHhCCcceEEEecCCC-----CCCCCCCccccCCceEeccCCCCCcHHHHHHHHHHHHHHHH
Q 045269 10 LVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAWT-----EPFDPNDPILKFQSVLITPHVGGVTEHSYRSTAKVVGDVAL 84 (99)
Q Consensus 10 lIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~~-----Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~~~~~~~~~~~l~ 84 (99)
+|...+..=+-.-|...|-.||-..|.+++-... .-+++..+|.-.++ .|. .|.+.++.++ .|--
T Consensus 61 vvr~~~~~Dv~~lA~~AA~~S~lgVGIGi~skGt~VIH~kdL~Pl~nLeLf~~---ap~---~t~e~~R~iG----~NAA 130 (184)
T d1iwpb_ 61 VVRILRTSDVSFMAWDAANLSGSGIGIGIQSKGTTVIHQRDLLPLSNLELFSQ---APL---LTLETYRQIG----KNAA 130 (184)
T ss_dssp EEECCSCCCHHHHHHHHHHHSTTSEEEEECTTCCEEEEETTSCTTCCSEEECC---GGG---CCHHHHHHHH----HHHH
T ss_pred EEEeCCCCCHHHHHHHHHHhCCCceeEEEcCCCcEEEEcCCCCCCCCcccccC---Ccc---cCHHHHHHHh----HHHH
Confidence 5666666667777889999999999999975321 22223333222111 132 3566665544 5677
Q ss_pred HHHcCCCCCcccccC
Q 045269 85 QLHAGTPLTGIEPVN 99 (99)
Q Consensus 85 ~~~~g~~~~~~~~~n 99 (99)
+|.+|..+..+.+.|
T Consensus 131 RlvKG~~p~Pv~~~n 145 (184)
T d1iwpb_ 131 RYARKESPSPVPVVN 145 (184)
T ss_dssp HHHTTCCCCCCCCCC
T ss_pred HHhcCCCCCCccccC
Confidence 899999998887766
No 32
>d2okga1 c.124.1.8 (A:89-338) Central glycolytic gene regulator CggR {Bacillus subtilis [TaxId: 1423]}
Probab=33.39 E-value=22 Score=22.58 Aligned_cols=38 Identities=8% Similarity=0.127 Sum_probs=30.1
Q ss_pred ccCCceEeccCCCCCcHHHHHHHHHHHHHHHHHHHcCC
Q 045269 53 LKFQSVLITPHVGGVTEHSYRSTAKVVGDVALQLHAGT 90 (99)
Q Consensus 53 ~~~~nvi~TPH~a~~t~~~~~~~~~~~~~~l~~~~~g~ 90 (99)
+.+.++++.|-.+..+.+..+++++.+++-+.+.++++
T Consensus 17 fgLk~~~Vv~~~~~~~~~~~~~l~~aaA~~L~~~l~~~ 54 (250)
T d2okga1 17 LNLKDAIIVSGDSDQSPWVKKEMGRAAVACMKKRFSGK 54 (250)
T ss_dssp SCCSEEEEESSCTTTCTHHHHHHHHHHHHHHHHHCCSE
T ss_pred hCCCEEEEecCCCCCchHHHHHHHHHHHHHHHHhcCCC
Confidence 56788999997666667777888888999888887654
No 33
>d1r61a_ c.8.8.1 (A:) Unnamed protein {Bacillus stearothermophilus [TaxId: 1422]}
Probab=30.22 E-value=19 Score=22.26 Aligned_cols=38 Identities=21% Similarity=0.289 Sum_probs=27.3
Q ss_pred cEEEEccCC---------cccCHHHHHHHHHhCCcceEEEecCCCCCC
Q 045269 8 SLLVNIVRG---------GLLDYEAVAHYLESGHLGGLGLDVAWTEPF 46 (99)
Q Consensus 8 ailIN~aRg---------~lvd~~aL~~aL~~g~i~gaalDV~~~Ep~ 46 (99)
.+|++|+.. .=+++ +..+.|.+.++.+.++|.+..++.
T Consensus 104 ~vl~~T~~~~~~~~~~~~p~l~~-eaa~~L~~~~i~~iG~D~~svd~~ 150 (205)
T d1r61a_ 104 FVLFKTKNSFEDAFHFEFIFVAE-DAARYLADKQIRGVGIDALGIERA 150 (205)
T ss_dssp EEEEECGGGGCCSCCTTCCEECH-HHHHHHHHHTCSEEECSSSCSCCS
T ss_pred EEEEeccccCCccccCCCCccCH-HHHHHHHhCceEEEEEcccccccc
Confidence 467888643 23344 457788888999999999887764
No 34
>d1ynya2 c.1.9.6 (A:53-384) D-hydantoinase {Bacillus sp. AR9 [TaxId: 301298]}
Probab=28.45 E-value=10 Score=25.16 Aligned_cols=23 Identities=26% Similarity=0.271 Sum_probs=18.9
Q ss_pred ccCHHHHHHHHHhCCcceEEEec
Q 045269 18 LLDYEAVAHYLESGHLGGLGLDV 40 (99)
Q Consensus 18 lvd~~aL~~aL~~g~i~gaalDV 40 (99)
-=|.++|.++|++|.|--++.|=
T Consensus 242 ~~dr~aL~~al~~G~id~i~SDH 264 (332)
T d1ynya2 242 KWNQEVLWSALKNGILQTVGSDH 264 (332)
T ss_dssp TTHHHHHHHHHHTTSSCEECCCB
T ss_pred HHHHHHHHHHHhcCCeeEEEecC
Confidence 45789999999999997666664
No 35
>d2fvka2 c.1.9.6 (A:57-440) Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Saccharomyces kluyveri) [TaxId: 4934]}
Probab=27.11 E-value=15 Score=25.08 Aligned_cols=21 Identities=14% Similarity=0.208 Sum_probs=19.1
Q ss_pred CHHHHHHHHHhCCcceEEEec
Q 045269 20 DYEAVAHYLESGHLGGLGLDV 40 (99)
Q Consensus 20 d~~aL~~aL~~g~i~gaalDV 40 (99)
|.++|.++|++|.|--.+.|=
T Consensus 283 dr~aL~~~l~dG~Id~IaSDH 303 (384)
T d2fvka2 283 TQKSIWKGMNNGTFTIVGSDH 303 (384)
T ss_dssp SHHHHHHHHHHTSCSEECCCB
T ss_pred HHHHHHHHhhCCceeEEecCC
Confidence 889999999999998888875
No 36
>d1otfa_ d.80.1.1 (A:) 4-oxalocrotonate tautomerase {Pseudomonas sp., DmpI [TaxId: 306]}
Probab=24.57 E-value=39 Score=16.36 Aligned_cols=24 Identities=13% Similarity=0.136 Sum_probs=20.8
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHc
Q 045269 65 GGVTEHSYRSTAKVVGDVALQLHA 88 (99)
Q Consensus 65 a~~t~~~~~~~~~~~~~~l~~~~~ 88 (99)
.|.|.+..+++.+.+.+.+.+.+.
T Consensus 9 ~Grs~eqK~~l~~~it~~~~~~~g 32 (59)
T d1otfa_ 9 EGRTDEQKETLIRQVSEAMANSLD 32 (59)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhC
Confidence 578999999999999998888776
No 37
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]}
Probab=24.44 E-value=24 Score=22.86 Aligned_cols=24 Identities=13% Similarity=0.025 Sum_probs=19.7
Q ss_pred CCCcEEEEccCCcccCHHHHHHHHHhCCcceE
Q 045269 5 CTSSLLVNIVRGGLLDYEAVAHYLESGHLGGL 36 (99)
Q Consensus 5 k~~ailIN~aRg~lvd~~aL~~aL~~g~i~ga 36 (99)
.+|+++||+| ++++.+-.|++.+.
T Consensus 243 ~~~~~vVN~G--------d~l~~~Tng~~kst 266 (329)
T d1odma_ 243 DDTGYLINCG--------SYMAHLTNNYYKAP 266 (329)
T ss_dssp CTTSEEEEEC--------HHHHHHTTTSSCCC
T ss_pred ccceEEEehh--------hhHHHHhCCEecCC
Confidence 4788888886 89999999998753
No 38
>d2d0ob1 c.51.3.2 (B:5-112) Diol dehydratase-reactivating factor small subunit DdrB {Klebsiella oxytoca [TaxId: 571]}
Probab=23.87 E-value=61 Score=18.31 Aligned_cols=71 Identities=20% Similarity=0.235 Sum_probs=42.9
Q ss_pred EEccCCcccCHHHHHHHHHhCCcceEEEec----CCCCCCCCCCccccCCceEeccCCCCCcHHHHHHHHHHHHHHHHHH
Q 045269 11 VNIVRGGLLDYEAVAHYLESGHLGGLGLDV----AWTEPFDPNDPILKFQSVLITPHVGGVTEHSYRSTAKVVGDVALQL 86 (99)
Q Consensus 11 IN~aRg~lvd~~aL~~aL~~g~i~gaalDV----~~~Ep~~~~~~l~~~~nvi~TPH~a~~t~~~~~~~~~~~~~~l~~~ 86 (99)
|-+-+.+=+-.-|...|..|+-..|.++|- ....-++++.||+. .+|+. +.+.++.++ .|--++
T Consensus 34 i~~~~~~dv~~lA~~AA~~S~l~VGIgi~~~~~vih~k~Lp~~~pLF~-----~~~~~---~~~~~R~iG----~NAARl 101 (108)
T d2d0ob1 34 LQHHPAGEVVDSAWQAARSSPLLVGIACDRHMLVVHYKNLPASAPLFT-----LMHHQ---DSQAHRNTG----NNAARL 101 (108)
T ss_dssp EEEESSCCHHHHHHHHHHTCTTSEEEEECSSEEEEEETTSCTTCCSEE-----EETTS---CHHHHHHHH----HHHHHH
T ss_pred EEEcCCCCHHHHHHHHHHhCCCceEEEEcCCeEEEEccCCCCCCcccc-----cCccC---CHHHHHHHH----HHHHHH
Confidence 344444445566777888889888899873 11223445555554 56664 455555554 456667
Q ss_pred HcCCCCC
Q 045269 87 HAGTPLT 93 (99)
Q Consensus 87 ~~g~~~~ 93 (99)
.+|-|++
T Consensus 102 vKG~Pfk 108 (108)
T d2d0ob1 102 VKGIPFR 108 (108)
T ss_dssp HTTCCCC
T ss_pred HhCCCCC
Confidence 7787764
No 39
>d1nfga2 c.1.9.6 (A:52-381) D-hydantoinase {Burkholderia pickettii [TaxId: 329]}
Probab=23.56 E-value=16 Score=24.12 Aligned_cols=23 Identities=17% Similarity=0.200 Sum_probs=20.2
Q ss_pred cCHHHHHHHHHhCCcceEEEecC
Q 045269 19 LDYEAVAHYLESGHLGGLGLDVA 41 (99)
Q Consensus 19 vd~~aL~~aL~~g~i~gaalDV~ 41 (99)
=|.++|.++|++|.|-..+.|=-
T Consensus 242 ~d~~aL~~~l~dG~Id~i~SDHa 264 (330)
T d1nfga2 242 KDHDVLWNALRNGVFETVSSDHC 264 (330)
T ss_dssp HHHHHHHHHHHTTCCSCEECCBC
T ss_pred HHHHHHhhhhcCCceeeecCCCC
Confidence 47899999999999998998853
No 40
>d1wuda1 a.60.8.1 (A:530-606) HRDC domain from RecQ helicase {Escherichia coli [TaxId: 562]}
Probab=22.66 E-value=50 Score=16.93 Aligned_cols=27 Identities=19% Similarity=0.108 Sum_probs=22.8
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHcCC
Q 045269 64 VGGVTEHSYRSTAKVVGDVALQLHAGT 90 (99)
Q Consensus 64 ~a~~t~~~~~~~~~~~~~~l~~~~~g~ 90 (99)
|.|.+..-..+.+..+++-|..|+.|.
T Consensus 51 I~G~g~~k~~~yG~~il~~i~~~~~~~ 77 (77)
T d1wuda1 51 VNGVGMRKLERFGKPFMALIRAHVDGD 77 (77)
T ss_dssp STTCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence 557788888999999999999998873
No 41
>d1wxma1 d.15.1.5 (A:8-80) A-Raf proto-oncogene serine/threonine-protein kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.31 E-value=47 Score=17.37 Aligned_cols=38 Identities=16% Similarity=0.134 Sum_probs=28.6
Q ss_pred CCCCc-EEEEccCCcccCHHHHHHHHHhCCcceEEEecCC
Q 045269 4 VCTSS-LLVNIVRGGLLDYEAVAHYLESGHLGGLGLDVAW 42 (99)
Q Consensus 4 mk~~a-ilIN~aRg~lvd~~aL~~aL~~g~i~gaalDV~~ 42 (99)
+++|. -.|++-.| .-=.++|.++++...+.-.+.|||-
T Consensus 7 LPngq~T~V~vrpG-~tir~~L~k~l~kRgl~~~~~~V~~ 45 (73)
T d1wxma1 7 LPNKQRTVVTVRDG-MSVYDSLDKALKVRGLNQDCCVVYR 45 (73)
T ss_dssp CSSSCEEEEECCSS-CBSHHHHHHHHHTTTCCSSSEEEEE
T ss_pred cCCCCeEEEEecCC-CCHHHHHHHHHHHcCCCHHHEEEEE
Confidence 34454 45666666 4457899999999999989999984
Done!