BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045271
(338 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/299 (34%), Positives = 141/299 (47%), Gaps = 35/299 (11%)
Query: 37 ELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKGVLNDDKEIAVKRLSRSSGQG----LQ 92
+L F L + A+ NFSN+N LG GGFG VYKG L D +AVKRL QG Q
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 93 EFKNLIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSV-QLDWNRRMC 151
+I+ H+NL+R + YM N S+ L + S LDW +R
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 143
Query: 152 IINGIAR------DHKMNPKI--------------------SDFGMARVFGGNQSEANTN 185
I G AR DH +PKI DFG+A++
Sbjct: 144 IALGSARGLAYLHDH-CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA 202
Query: 186 RVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGRK--DTRFYLYEQGQSLLTYTW 243
V GT G++APEY G S K+DVF +GV+LLE+I+G++ D + LL +
Sbjct: 203 -VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 261
Query: 244 KLWCEGNAQELMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSVVFMLATDTIT 302
L E + L+D L+ ++ EE+ + I + LLC Q P +RP MS VV ML D +
Sbjct: 262 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 320
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/299 (33%), Positives = 139/299 (46%), Gaps = 35/299 (11%)
Query: 37 ELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKGVLNDDKEIAVKRLSRSSGQG----LQ 92
+L F L + A+ NF N+N LG GGFG VYKG L D +AVKRL QG Q
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 93 EFKNLIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSV-QLDWNRRMC 151
+I+ H+NL+R + YM N S+ L + S LDW +R
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 135
Query: 152 IINGIAR------DHKMNPKI--------------------SDFGMARVFGGNQSEANTN 185
I G AR DH +PKI DFG+A++
Sbjct: 136 IALGSARGLAYLHDH-CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA 194
Query: 186 RVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGRK--DTRFYLYEQGQSLLTYTW 243
V G G++APEY G S K+DVF +GV+LLE+I+G++ D + LL +
Sbjct: 195 -VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253
Query: 244 KLWCEGNAQELMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSVVFMLATDTIT 302
L E + L+D L+ ++ EE+ + I + LLC Q P +RP MS VV ML D +
Sbjct: 254 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 312
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 142/290 (48%), Gaps = 31/290 (10%)
Query: 34 ESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKGVLNDDKEIAVKRLSRSSGQGLQE 93
ES +PL L+ EAT NF ++ +G G FG VYKGVL D ++A+KR + S QG++E
Sbjct: 25 ESYRVPLVDLE---EATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEE 81
Query: 94 FKNLIAKL---QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDST-RSVQLDWNRR 149
F+ I L +H +LV I +YM N +L L+ S ++ + W +R
Sbjct: 82 FETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQR 141
Query: 150 MCIINGIAR----------------------DHKMNPKISDFGMARVFGGNQSEANTNRV 187
+ I G AR D PKI+DFG+++ G + + V
Sbjct: 142 LEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKK-GTELDQTHLXXV 200
Query: 188 V-GTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLW 246
V GT GY+ PEY ++G + KSDV+SFGV+L E++ R L + +L + +
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESH 260
Query: 247 CEGNAQELMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSVVFML 296
G ++++DP L + E L K + C+ DRP+M V++ L
Sbjct: 261 NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 142/290 (48%), Gaps = 31/290 (10%)
Query: 34 ESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKGVLNDDKEIAVKRLSRSSGQGLQE 93
ES +PL L+ EAT NF ++ +G G FG VYKGVL D ++A+KR + S QG++E
Sbjct: 25 ESYRVPLVDLE---EATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEE 81
Query: 94 FKNLIAKL---QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDST-RSVQLDWNRR 149
F+ I L +H +LV I +YM N +L L+ S ++ + W +R
Sbjct: 82 FETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQR 141
Query: 150 MCIINGIAR----------------------DHKMNPKISDFGMARVFGGNQSEANTNRV 187
+ I G AR D PKI+DFG+++ G + + V
Sbjct: 142 LEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKK-GTELGQTHLXXV 200
Query: 188 V-GTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLW 246
V GT GY+ PEY ++G + KSDV+SFGV+L E++ R L + +L + +
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESH 260
Query: 247 CEGNAQELMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSVVFML 296
G ++++DP L + E L K + C+ DRP+M V++ L
Sbjct: 261 NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 94/196 (47%), Gaps = 31/196 (15%)
Query: 57 NKLGEGGFGPVYKGVLNDDKEIAVKRLSRSSGQGLQEFKN-------LIAKLQHKNLVRX 109
NK+GEGGFG VYKG +N+ +AVK+L+ +E K ++AK QH+NLV
Sbjct: 37 NKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 110 XXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIAR----------- 158
+ YMPN SL L + L W+ R I G A
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI 155
Query: 159 -----------DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVK 207
D KISDFG+AR +R+VGT YMAPE AL G + K
Sbjct: 156 HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPK 214
Query: 208 SDVFSFGVLLLEIISG 223
SD++SFGV+LLEII+G
Sbjct: 215 SDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 93/196 (47%), Gaps = 31/196 (15%)
Query: 57 NKLGEGGFGPVYKGVLNDDKEIAVKRLSRSSGQGLQEFKN-------LIAKLQHKNLVRX 109
NK+GEGGFG VYKG +N+ +AVK+L+ +E K ++AK QH+NLV
Sbjct: 31 NKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 89
Query: 110 XXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIAR----------- 158
+ YMPN SL L + L W+ R I G A
Sbjct: 90 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI 149
Query: 159 -----------DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVK 207
D KISDFG+AR R+VGT YMAPE AL G + K
Sbjct: 150 HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPK 208
Query: 208 SDVFSFGVLLLEIISG 223
SD++SFGV+LLEII+G
Sbjct: 209 SDIYSFGVVLLEIITG 224
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 93/196 (47%), Gaps = 31/196 (15%)
Query: 57 NKLGEGGFGPVYKGVLNDDKEIAVKRLSRSSGQGLQEFKN-------LIAKLQHKNLVRX 109
NK+GEGGFG VYKG +N+ +AVK+L+ +E K ++AK QH+NLV
Sbjct: 37 NKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 110 XXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIAR----------- 158
+ YMPN SL L + L W+ R I G A
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI 155
Query: 159 -----------DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVK 207
D KISDFG+AR R+VGT YMAPE AL G + K
Sbjct: 156 HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPK 214
Query: 208 SDVFSFGVLLLEIISG 223
SD++SFGV+LLEII+G
Sbjct: 215 SDIYSFGVVLLEIITG 230
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 90/196 (45%), Gaps = 31/196 (15%)
Query: 57 NKLGEGGFGPVYKGVLNDDKEIAVKRLSRSSGQGLQEFKN-------LIAKLQHKNLVRX 109
NK GEGGFG VYKG +N+ +AVK+L+ +E K + AK QH+NLV
Sbjct: 28 NKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVEL 86
Query: 110 XXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIAR----------- 158
+ Y PN SL L + L W+ R I G A
Sbjct: 87 LGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHHI 146
Query: 159 -----------DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVK 207
D KISDFG+AR +R+VGT Y APE AL G + K
Sbjct: 147 HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPK 205
Query: 208 SDVFSFGVLLLEIISG 223
SD++SFGV+LLEII+G
Sbjct: 206 SDIYSFGVVLLEIITG 221
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 88/189 (46%), Gaps = 24/189 (12%)
Query: 57 NKLGEGGFGPVYKGVLNDDKEIAVKRLSRS--SGQGLQEFKNLIAKLQHKNLVRXXXXXX 114
+LG G FG V+ G N+ ++AVK L S Q E NL+ LQH LVR
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 115 XXXXXXXICEYMPNKSL-DFLLFDSTRSVQL----DWNRR----MCII---NGIARD--- 159
I EYM SL DFL D V L D++ + M I N I RD
Sbjct: 79 REEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRA 138
Query: 160 ------HKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSF 213
+ KI+DFG+ARV N+ A + APE G F++KSDV+SF
Sbjct: 139 ANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINFGCFTIKSDVWSF 197
Query: 214 GVLLLEIIS 222
G+LL EI++
Sbjct: 198 GILLYEIVT 206
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 88/188 (46%), Gaps = 24/188 (12%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRS--SGQGLQEFKNLIAKLQHKNLVRXXXXXXX 115
KLG G FG V+ G N+ ++AVK L S Q E NL+ LQH LVR
Sbjct: 19 KLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 116 XXXXXXICEYMPNKSL-DFLLFDSTRSVQL----DWNRR----MCII---NGIARD---- 159
I E+M SL DFL D V L D++ + M I N I RD
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAA 138
Query: 160 -----HKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFG 214
+ KI+DFG+ARV N+ A + APE G F++KS+V+SFG
Sbjct: 139 NVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINFGCFTIKSNVWSFG 197
Query: 215 VLLLEIIS 222
+LL EI++
Sbjct: 198 ILLYEIVT 205
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 93/191 (48%), Gaps = 27/191 (14%)
Query: 56 ENKLGEGGFGPVYKGVLNDDKEIAVKRL---SRSSGQGLQEFKNLIAKLQHKNLVRXXXX 112
E KLG+G FG V+ G N +A+K L + S LQE ++ KL+H+ LV+
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE-AQVMKKLRHEKLVQLYAV 81
Query: 113 XXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRRMC--IINGIARDHKMN------ 163
+CEYM SL DFL + + ++L M I +G+A +MN
Sbjct: 82 VSEEPIYI-VCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 164 ------------PKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVF 211
K++DFG+AR+ N+ A + APE AL G F++KSDV+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVW 199
Query: 212 SFGVLLLEIIS 222
SFG+LL E+ +
Sbjct: 200 SFGILLTELTT 210
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 90/190 (47%), Gaps = 29/190 (15%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSS--GQGLQEFKNLIAKLQHKNLVRXXXXXXX 115
+LG G FG V+ G N ++AVK L + S NL+ +LQH+ LVR
Sbjct: 29 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 88
Query: 116 XXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRR----------MCII---NGIARDHK 161
I EYM N SL DFL + ++L N+ M I N I RD +
Sbjct: 89 EPIYI-ITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLR 145
Query: 162 ---------MNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFS 212
++ KI+DFG+AR+ N+ A + APE G F++KSDV+S
Sbjct: 146 AANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVWS 204
Query: 213 FGVLLLEIIS 222
FG+LL EI++
Sbjct: 205 FGILLTEIVT 214
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 90/190 (47%), Gaps = 29/190 (15%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSS--GQGLQEFKNLIAKLQHKNLVRXXXXXXX 115
+LG G FG V+ G N ++AVK L + S NL+ +LQH+ LVR
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 116 XXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRR----------MCII---NGIARDHK 161
I EYM N SL DFL + ++L N+ M I N I RD +
Sbjct: 80 EPIYI-ITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLR 136
Query: 162 ---------MNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFS 212
++ KI+DFG+AR+ N+ A + APE G F++KSDV+S
Sbjct: 137 AANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVWS 195
Query: 213 FGVLLLEIIS 222
FG+LL EI++
Sbjct: 196 FGILLTEIVT 205
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 90/190 (47%), Gaps = 29/190 (15%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSS--GQGLQEFKNLIAKLQHKNLVRXXXXXXX 115
+LG G FG V+ G N ++AVK L + S NL+ +LQH+ LVR
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 116 XXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRR----------MCII---NGIARDHK 161
I EYM N SL DFL + ++L N+ M I N I RD +
Sbjct: 86 EPIYI-ITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLR 142
Query: 162 ---------MNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFS 212
++ KI+DFG+AR+ N+ A + APE G F++KSDV+S
Sbjct: 143 AANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVWS 201
Query: 213 FGVLLLEIIS 222
FG+LL EI++
Sbjct: 202 FGILLTEIVT 211
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 90/190 (47%), Gaps = 29/190 (15%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSS--GQGLQEFKNLIAKLQHKNLVRXXXXXXX 115
+LG G FG V+ G N ++AVK L + S NL+ +LQH+ LVR
Sbjct: 21 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 116 XXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRR----------MCII---NGIARDHK 161
I EYM N SL DFL + ++L N+ M I N I RD +
Sbjct: 81 EPIYI-ITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLR 137
Query: 162 ---------MNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFS 212
++ KI+DFG+AR+ N+ A + APE G F++KSDV+S
Sbjct: 138 AANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVWS 196
Query: 213 FGVLLLEIIS 222
FG+LL EI++
Sbjct: 197 FGILLTEIVT 206
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 90/190 (47%), Gaps = 29/190 (15%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSS--GQGLQEFKNLIAKLQHKNLVRXXXXXXX 115
+LG G FG V+ G N ++AVK L + S NL+ +LQH+ LVR
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 116 XXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRR----------MCII---NGIARDHK 161
I EYM N SL DFL + ++L N+ M I N I RD +
Sbjct: 80 EPIYI-ITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLR 136
Query: 162 ---------MNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFS 212
++ KI+DFG+AR+ N+ A + APE G F++KSDV+S
Sbjct: 137 AANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVWS 195
Query: 213 FGVLLLEIIS 222
FG+LL EI++
Sbjct: 196 FGILLTEIVT 205
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 90/190 (47%), Gaps = 29/190 (15%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSS--GQGLQEFKNLIAKLQHKNLVRXXXXXXX 115
+LG G FG V+ G N ++AVK L + S NL+ +LQH+ LVR
Sbjct: 22 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 116 XXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRR----------MCII---NGIARDHK 161
I EYM N SL DFL + ++L N+ M I N I RD +
Sbjct: 82 EPIYI-ITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLR 138
Query: 162 ---------MNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFS 212
++ KI+DFG+AR+ N+ A + APE G F++KSDV+S
Sbjct: 139 AANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVWS 197
Query: 213 FGVLLLEIIS 222
FG+LL EI++
Sbjct: 198 FGILLTEIVT 207
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 90/190 (47%), Gaps = 29/190 (15%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSS--GQGLQEFKNLIAKLQHKNLVRXXXXXXX 115
+LG G FG V+ G N ++AVK L + S NL+ +LQH+ LVR
Sbjct: 28 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 87
Query: 116 XXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRR----------MCII---NGIARDHK 161
I EYM N SL DFL + ++L N+ M I N I RD +
Sbjct: 88 EPIYI-ITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLR 144
Query: 162 ---------MNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFS 212
++ KI+DFG+AR+ N+ A + APE G F++KSDV+S
Sbjct: 145 AANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVWS 203
Query: 213 FGVLLLEIIS 222
FG+LL EI++
Sbjct: 204 FGILLTEIVT 213
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 90/190 (47%), Gaps = 29/190 (15%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSS--GQGLQEFKNLIAKLQHKNLVRXXXXXXX 115
+LG G FG V+ G N ++AVK L + S NL+ +LQH+ LVR
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 116 XXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRR----------MCII---NGIARDHK 161
I EYM N SL DFL + ++L N+ M I N I RD +
Sbjct: 86 EPIYI-ITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLR 142
Query: 162 ---------MNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFS 212
++ KI+DFG+AR+ N+ A + APE G F++KSDV+S
Sbjct: 143 AANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVWS 201
Query: 213 FGVLLLEIIS 222
FG+LL EI++
Sbjct: 202 FGILLTEIVT 211
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 90/190 (47%), Gaps = 29/190 (15%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSS--GQGLQEFKNLIAKLQHKNLVRXXXXXXX 115
+LG G FG V+ G N ++AVK L + S NL+ +LQH+ LVR
Sbjct: 25 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 84
Query: 116 XXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRR----------MCII---NGIARDHK 161
I EYM N SL DFL + ++L N+ M I N I RD +
Sbjct: 85 EPIYI-ITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLR 141
Query: 162 ---------MNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFS 212
++ KI+DFG+AR+ N+ A + APE G F++KSDV+S
Sbjct: 142 AANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVWS 200
Query: 213 FGVLLLEIIS 222
FG+LL EI++
Sbjct: 201 FGILLTEIVT 210
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 90/190 (47%), Gaps = 29/190 (15%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSS--GQGLQEFKNLIAKLQHKNLVRXXXXXXX 115
+LG G FG V+ G N ++AVK L + S NL+ +LQH+ LVR
Sbjct: 30 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 89
Query: 116 XXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRR----------MCII---NGIARDHK 161
I EYM N SL DFL + ++L N+ M I N I RD +
Sbjct: 90 EPIYI-ITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLR 146
Query: 162 ---------MNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFS 212
++ KI+DFG+AR+ N+ A + APE G F++KSDV+S
Sbjct: 147 AANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVWS 205
Query: 213 FGVLLLEIIS 222
FG+LL EI++
Sbjct: 206 FGILLTEIVT 215
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 90/190 (47%), Gaps = 29/190 (15%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSS--GQGLQEFKNLIAKLQHKNLVRXXXXXXX 115
+LG G FG V+ G N ++AVK L + S NL+ +LQH+ LVR
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 116 XXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRR----------MCII---NGIARDHK 161
I EYM N SL DFL + ++L N+ M I N I RD +
Sbjct: 80 EPIYI-ITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLR 136
Query: 162 ---------MNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFS 212
++ KI+DFG+AR+ N+ A + APE G F++KSDV+S
Sbjct: 137 AANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVWS 195
Query: 213 FGVLLLEIIS 222
FG+LL EI++
Sbjct: 196 FGILLTEIVT 205
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 90/190 (47%), Gaps = 29/190 (15%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSS--GQGLQEFKNLIAKLQHKNLVRXXXXXXX 115
+LG G FG V+ G N ++AVK L + S NL+ +LQH+ LVR
Sbjct: 15 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 116 XXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRR----------MCII---NGIARDHK 161
I EYM N SL DFL + ++L N+ M I N I RD +
Sbjct: 75 EPIYI-ITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLR 131
Query: 162 ---------MNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFS 212
++ KI+DFG+AR+ N+ A + APE G F++KSDV+S
Sbjct: 132 AANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVWS 190
Query: 213 FGVLLLEIIS 222
FG+LL EI++
Sbjct: 191 FGILLTEIVT 200
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 94/191 (49%), Gaps = 27/191 (14%)
Query: 56 ENKLGEGGFGPVYKGVLNDDKEIAVKRL---SRSSGQGLQEFKNLIAKLQHKNLVRXXXX 112
E KLG+G FG V+ G N +A+K L + S LQE ++ KL+H+ LV+
Sbjct: 13 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE-AQVMKKLRHEKLVQLYAV 71
Query: 113 XXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRRMC--IINGIARDHKMN------ 163
+ EYM SL DFL ++ + ++L M I +G+A +MN
Sbjct: 72 VSEEPIXI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 130
Query: 164 ------------PKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVF 211
K++DFG+AR+ N+ A + APE AL G F++KSDV+
Sbjct: 131 RAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYGRFTIKSDVW 189
Query: 212 SFGVLLLEIIS 222
SFG+LL E+ +
Sbjct: 190 SFGILLTELTT 200
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 93/191 (48%), Gaps = 27/191 (14%)
Query: 56 ENKLGEGGFGPVYKGVLNDDKEIAVKRL---SRSSGQGLQEFKNLIAKLQHKNLVRXXXX 112
E KLG+G FG V+ G N +A+K L + S LQE ++ KL+H+ LV+
Sbjct: 16 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE-AQVMKKLRHEKLVQLYAV 74
Query: 113 XXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRRMC--IINGIARDHKMN------ 163
+ EYM SL DFL ++ + ++L M I +G+A +MN
Sbjct: 75 VSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 133
Query: 164 ------------PKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVF 211
K++DFG+AR+ N+ A + APE AL G F++KSDV+
Sbjct: 134 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIKSDVW 192
Query: 212 SFGVLLLEIIS 222
SFG+LL E+ +
Sbjct: 193 SFGILLTELTT 203
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 93/191 (48%), Gaps = 27/191 (14%)
Query: 56 ENKLGEGGFGPVYKGVLNDDKEIAVKRL---SRSSGQGLQEFKNLIAKLQHKNLVRXXXX 112
E KLG+G FG V+ G N +A+K L + S LQE ++ KL+H+ LV+
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE-AQVMKKLRHEKLVQLYAV 247
Query: 113 XXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRRMC--IINGIARDHKMN------ 163
+ EYM SL DFL ++ + ++L M I +G+A +MN
Sbjct: 248 VSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 306
Query: 164 ------------PKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVF 211
K++DFG+AR+ N+ A + APE AL G F++KSDV+
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIKSDVW 365
Query: 212 SFGVLLLEIIS 222
SFG+LL E+ +
Sbjct: 366 SFGILLTELTT 376
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 93/191 (48%), Gaps = 27/191 (14%)
Query: 56 ENKLGEGGFGPVYKGVLNDDKEIAVKRL---SRSSGQGLQEFKNLIAKLQHKNLVRXXXX 112
E KLG+G FG V+ G N +A+K L + S LQE ++ KL+H+ LV+
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE-AQVMKKLRHEKLVQLYAV 247
Query: 113 XXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRRMC--IINGIARDHKMN------ 163
+ EYM SL DFL ++ + ++L M I +G+A +MN
Sbjct: 248 VSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 306
Query: 164 ------------PKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVF 211
K++DFG+AR+ N+ A + APE AL G F++KSDV+
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIKSDVW 365
Query: 212 SFGVLLLEIIS 222
SFG+LL E+ +
Sbjct: 366 SFGILLTELTT 376
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 92/191 (48%), Gaps = 27/191 (14%)
Query: 56 ENKLGEGGFGPVYKGVLNDDKEIAVKRL---SRSSGQGLQEFKNLIAKLQHKNLVRXXXX 112
E KLG+G FG V+ G N +A+K L + S LQE ++ KL+H+ LV+
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE-AQVMKKLRHEKLVQLYAV 81
Query: 113 XXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRRMC--IINGIARDHKMN------ 163
I EYM SL DFL + + ++L M I +G+A +MN
Sbjct: 82 VSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 164 ------------PKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVF 211
K++DFG+AR+ N+ A + APE AL G F++KSDV+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYGRFTIKSDVW 199
Query: 212 SFGVLLLEIIS 222
SFG+LL E+ +
Sbjct: 200 SFGILLTELTT 210
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 89/190 (46%), Gaps = 29/190 (15%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSS--GQGLQEFKNLIAKLQHKNLVRXXXXXXX 115
+LG G FG V+ G N ++AVK L + S NL+ +LQH+ LVR
Sbjct: 16 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 116 XXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRRMCIINGIARD----------HK--- 161
I EYM N SL DFL + ++L N+ + + IA H+
Sbjct: 76 EPIYI-ITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLR 132
Query: 162 ---------MNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFS 212
++ KI+DFG+AR+ N+ A + APE G F++KSDV+S
Sbjct: 133 AANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVWS 191
Query: 213 FGVLLLEIIS 222
FG+LL EI++
Sbjct: 192 FGILLTEIVT 201
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 121/278 (43%), Gaps = 44/278 (15%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRS--SGQGLQEFKNLIAKLQHKNLVRXXXXXXX 115
+LG G FG V+ G N + ++A+K L S + E ++ KL+H LV+
Sbjct: 16 RLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 116 XXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRRMC--IINGIARDHKMN--------- 163
+ EYM SL DFL R+++L M + G+A +MN
Sbjct: 76 EPIYI-VTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSA 134
Query: 164 ---------PKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFG 214
KI+DFG+AR+ N+ A + APE AL G F++KSDV+SFG
Sbjct: 135 NILVGNGLICKIADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFG 193
Query: 215 VLLLEIIS-GRKDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFILEELLKRIH 273
+LL E+++ GR + + +++ C + L EL+ IH
Sbjct: 194 ILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDC----------PISLHELM--IH 241
Query: 274 IGLLCVQEDPADRPTMSSVVFMLATDTITLLQPT-QPA 310
C ++DP +RPT + L D T +P QP
Sbjct: 242 ----CWKKDPEERPTFEYLQSFL-EDYFTATEPQYQPG 274
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 93/191 (48%), Gaps = 27/191 (14%)
Query: 56 ENKLGEGGFGPVYKGVLNDDKEIAVKRL---SRSSGQGLQEFKNLIAKLQHKNLVRXXXX 112
E KLG+G FG V+ G N +A+K L + S LQE ++ KL+H+ LV+
Sbjct: 20 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE-AQVMKKLRHEKLVQLYAV 78
Query: 113 XXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRRMC--IINGIARDHKMN------ 163
+ EYM SL DFL ++ + ++L M I +G+A +MN
Sbjct: 79 VSEEPIYI-VTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDL 137
Query: 164 ------------PKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVF 211
K++DFG+AR+ N+ A + APE AL G F++KSDV+
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIKSDVW 196
Query: 212 SFGVLLLEIIS 222
SFG+LL E+ +
Sbjct: 197 SFGILLTELTT 207
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 93/191 (48%), Gaps = 27/191 (14%)
Query: 56 ENKLGEGGFGPVYKGVLNDDKEIAVKRL---SRSSGQGLQEFKNLIAKLQHKNLVRXXXX 112
E KLG+G FG V+ G N +A+K L + S LQE ++ KL+H+ LV+
Sbjct: 20 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE-AQVMKKLRHEKLVQLYAV 78
Query: 113 XXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRRMC--IINGIARDHKMN------ 163
+ EYM SL DFL ++ + ++L M I +G+A +MN
Sbjct: 79 VSEEPIYI-VTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDL 137
Query: 164 ------------PKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVF 211
K++DFG+AR+ N+ A + APE AL G F++KSDV+
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEWTARQGAKF-PIKWTAPEAALYGRFTIKSDVW 196
Query: 212 SFGVLLLEIIS 222
SFG+LL E+ +
Sbjct: 197 SFGILLTELTT 207
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 92/191 (48%), Gaps = 27/191 (14%)
Query: 56 ENKLGEGGFGPVYKGVLNDDKEIAVKRL---SRSSGQGLQEFKNLIAKLQHKNLVRXXXX 112
E KLG+G FG V+ G N +A+K L + S LQE ++ KL+H+ LV+
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE-AQVMKKLRHEKLVQLYAV 81
Query: 113 XXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRRMC--IINGIARDHKMN------ 163
I EYM SL DFL + + ++L M I +G+A +MN
Sbjct: 82 VSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 164 ------------PKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVF 211
K++DFG+AR+ N+ A + APE AL G F++KSDV+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVW 199
Query: 212 SFGVLLLEIIS 222
SFG+LL E+ +
Sbjct: 200 SFGILLTELTT 210
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 93/191 (48%), Gaps = 27/191 (14%)
Query: 56 ENKLGEGGFGPVYKGVLNDDKEIAVKRL---SRSSGQGLQEFKNLIAKLQHKNLVRXXXX 112
E KLG+G FG V+ G N +A+K L + S LQE ++ KL+H+ LV+
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE-AQVMKKLRHEKLVQLYAV 247
Query: 113 XXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRRMC--IINGIARDHKMN------ 163
+ EYM SL DFL ++ + ++L M I +G+A +MN
Sbjct: 248 VSEEPIYI-VGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 306
Query: 164 ------------PKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVF 211
K++DFG+AR+ N+ A + APE AL G F++KSDV+
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIKSDVW 365
Query: 212 SFGVLLLEIIS 222
SFG+LL E+ +
Sbjct: 366 SFGILLTELTT 376
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 92/191 (48%), Gaps = 27/191 (14%)
Query: 56 ENKLGEGGFGPVYKGVLNDDKEIAVKRL---SRSSGQGLQEFKNLIAKLQHKNLVRXXXX 112
E KLG+G FG V+ G N +A+K L + S LQE ++ KL+H+ LV+
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE-AQVMKKLRHEKLVQLYAV 81
Query: 113 XXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRRMC--IINGIARDHKMN------ 163
+ EYM SL DFL + + ++L M I +G+A +MN
Sbjct: 82 VSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 164 ------------PKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVF 211
K++DFG+AR+ N+ A + APE AL G F++KSDV+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVW 199
Query: 212 SFGVLLLEIIS 222
SFG+LL E+ +
Sbjct: 200 SFGILLTELTT 210
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 92/191 (48%), Gaps = 27/191 (14%)
Query: 56 ENKLGEGGFGPVYKGVLNDDKEIAVKRL---SRSSGQGLQEFKNLIAKLQHKNLVRXXXX 112
E KLG+G FG V+ G N +A+K L + S LQE ++ KL+H+ LV+
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE-AQVMKKLRHEKLVQLYAV 81
Query: 113 XXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRRMC--IINGIARDHKMN------ 163
+ EYM SL DFL + + ++L M I +G+A +MN
Sbjct: 82 VSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 164 ------------PKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVF 211
K++DFG+AR+ N+ A + APE AL G F++KSDV+
Sbjct: 141 AAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVW 199
Query: 212 SFGVLLLEIIS 222
SFG+LL E+ +
Sbjct: 200 SFGILLTELTT 210
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 92/191 (48%), Gaps = 27/191 (14%)
Query: 56 ENKLGEGGFGPVYKGVLNDDKEIAVKRL---SRSSGQGLQEFKNLIAKLQHKNLVRXXXX 112
E KLG+G FG V+ G N +A+K L + S LQE ++ KL+H+ LV+
Sbjct: 12 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE-AQVMKKLRHEKLVQLYAV 70
Query: 113 XXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRRMC--IINGIARDHKMN------ 163
+ EYM SL DFL + + ++L M I +G+A +MN
Sbjct: 71 VSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 129
Query: 164 ------------PKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVF 211
K++DFG+AR+ N+ A + APE AL G F++KSDV+
Sbjct: 130 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIKSDVW 188
Query: 212 SFGVLLLEIIS 222
SFG+LL E+ +
Sbjct: 189 SFGILLTELTT 199
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 92/191 (48%), Gaps = 27/191 (14%)
Query: 56 ENKLGEGGFGPVYKGVLNDDKEIAVKRL---SRSSGQGLQEFKNLIAKLQHKNLVRXXXX 112
E KLG+G FG V+ G N +A+K L + S LQE ++ KL+H+ LV+
Sbjct: 14 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE-AQVMKKLRHEKLVQLYAV 72
Query: 113 XXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRRMC--IINGIARDHKMN------ 163
+ EYM SL DFL + + ++L M I +G+A +MN
Sbjct: 73 VSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 131
Query: 164 ------------PKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVF 211
K++DFG+AR+ N+ A + APE AL G F++KSDV+
Sbjct: 132 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIKSDVW 190
Query: 212 SFGVLLLEIIS 222
SFG+LL E+ +
Sbjct: 191 SFGILLTELTT 201
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 25/190 (13%)
Query: 56 ENKLGEGGFGPVYKGVLNDDKEIAVKRLSRS--SGQGLQEFKNLIAKLQHKNLVRXXXXX 113
E KLG+G FG V+ G N +A+K L S + + ++ KL+H+ LV+
Sbjct: 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 331
Query: 114 XXXXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRRMC--IINGIARDHKMN------- 163
+ EYM SL DFL ++ + ++L M I +G+A +MN
Sbjct: 332 SEEPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 390
Query: 164 -----------PKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFS 212
K++DFG+AR+ N+ A + APE AL G F++KSDV+S
Sbjct: 391 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 449
Query: 213 FGVLLLEIIS 222
FG+LL E+ +
Sbjct: 450 FGILLTELTT 459
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 92/191 (48%), Gaps = 27/191 (14%)
Query: 56 ENKLGEGGFGPVYKGVLNDDKEIAVKRL---SRSSGQGLQEFKNLIAKLQHKNLVRXXXX 112
E KLG+G FG V+ G N +A+K L + S LQE ++ K++H+ LV+
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE-AQVMKKIRHEKLVQLYAV 81
Query: 113 XXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRRMC--IINGIARDHKMN------ 163
+ EYM SL DFL + + ++L M I +G+A +MN
Sbjct: 82 VSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 164 ------------PKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVF 211
K++DFG+AR+ N+ A + APE AL G F++KSDV+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVW 199
Query: 212 SFGVLLLEIIS 222
SFG+LL E+ +
Sbjct: 200 SFGILLTELTT 210
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 91/191 (47%), Gaps = 27/191 (14%)
Query: 56 ENKLGEGGFGPVYKGVLNDDKEIAVKRL---SRSSGQGLQEFKNLIAKLQHKNLVRXXXX 112
E KLG+G FG V+ G N +A+K L + S LQE ++ KL+H+ LV+
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE-AQVMKKLRHEKLVQLYAV 81
Query: 113 XXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRRMC--IINGIARDHKMN------ 163
+ EYM L DFL + + ++L M I +G+A +MN
Sbjct: 82 VSEEPIYI-VTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 164 ------------PKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVF 211
K++DFG+AR+ N+ A + APE AL G F++KSDV+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVW 199
Query: 212 SFGVLLLEIIS 222
SFG+LL E+ +
Sbjct: 200 SFGILLTELTT 210
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 91/191 (47%), Gaps = 27/191 (14%)
Query: 56 ENKLGEGGFGPVYKGVLNDDKEIAVKRL---SRSSGQGLQEFKNLIAKLQHKNLVRXXXX 112
E KLG+G FG V+ G N +A+K L + S LQE ++ KL+H+ LV+
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE-AQVMKKLRHEKLVQLYAV 81
Query: 113 XXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRRMC--IINGIARDHKMN------ 163
+ EYM L DFL + + ++L M I +G+A +MN
Sbjct: 82 VSEEPIYI-VMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 164 ------------PKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVF 211
K++DFG+AR+ N+ A + APE AL G F++KSDV+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVW 199
Query: 212 SFGVLLLEIIS 222
SFG+LL E+ +
Sbjct: 200 SFGILLTELTT 210
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 120/280 (42%), Gaps = 44/280 (15%)
Query: 56 ENKLGEGGFGPVYKGVLNDDKEIAVKRL--SRSSGQGLQEFKNLIAKLQHKNLVRXXXXX 113
E KLG+G FG V+ G N +A+K L S + + ++ KL+H+ LV+
Sbjct: 190 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVV 249
Query: 114 XXXXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRRMC--IINGIARDHKMN------- 163
+ EYM SL DFL + + ++L M I +G+A +MN
Sbjct: 250 SEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 308
Query: 164 -----------PKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFS 212
K++DFG+ R+ N+ A + APE AL G F++KSDV+S
Sbjct: 309 AANILVGENLVCKVADFGLGRLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWS 367
Query: 213 FGVLLLEIIS-GRKDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFILEELLKR 271
FG+LL E+ + GR + + + +++ C E + ++ +
Sbjct: 368 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ---------- 417
Query: 272 IHIGLLCVQEDPADRPTMSSVVFMLATDTITLLQP-TQPA 310
C ++DP +RPT + L D T +P QP
Sbjct: 418 ------CWRKDPEERPTFEYLQAFLE-DYFTSTEPQXQPG 450
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 88/190 (46%), Gaps = 29/190 (15%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSS--GQGLQEFKNLIAKLQHKNLVRXXXXXXX 115
+LG G G V+ G N ++AVK L + S NL+ +LQH+ LVR
Sbjct: 20 RLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 116 XXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRR----------MCII---NGIARDHK 161
I EYM N SL DFL + ++L N+ M I N I RD +
Sbjct: 80 EPIYI-ITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLR 136
Query: 162 ---------MNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFS 212
++ KI+DFG+AR+ + A + APE G F++KSDV+S
Sbjct: 137 AANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVWS 195
Query: 213 FGVLLLEIIS 222
FG+LL EI++
Sbjct: 196 FGILLTEIVT 205
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 89/191 (46%), Gaps = 27/191 (14%)
Query: 56 ENKLGEGGFGPVYKGVLNDDKEIAVKRLSRSSGQGLQEF---KNLIAKLQHKNLVRXXXX 112
E KLG G FG V+ N ++AVK + S ++ F N++ LQH LV+
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAV 78
Query: 113 XXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQL----DWNRR----MCII---NGIARDH 160
I E+M SL DFL D L D++ + M I N I RD
Sbjct: 79 VTKEPIYI-ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 137
Query: 161 K---------MNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVF 211
+ + KI+DFG+ARV N+ A + APE G F++KSDV+
Sbjct: 138 RAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINFGSFTIKSDVW 196
Query: 212 SFGVLLLEIIS 222
SFG+LL+EI++
Sbjct: 197 SFGILLMEIVT 207
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 89/191 (46%), Gaps = 27/191 (14%)
Query: 56 ENKLGEGGFGPVYKGVLNDDKEIAVKRLSRSSGQGLQEF---KNLIAKLQHKNLVRXXXX 112
E KLG G FG V+ N ++AVK + S ++ F N++ LQH LV+
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAV 251
Query: 113 XXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQL----DWNRR----MCII---NGIARDH 160
I E+M SL DFL D L D++ + M I N I RD
Sbjct: 252 VTKEPIYI-ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 310
Query: 161 K---------MNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVF 211
+ + KI+DFG+ARV N+ A + APE G F++KSDV+
Sbjct: 311 RAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINFGSFTIKSDVW 369
Query: 212 SFGVLLLEIIS 222
SFG+LL+EI++
Sbjct: 370 SFGILLMEIVT 380
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 88/191 (46%), Gaps = 37/191 (19%)
Query: 56 ENKLGEGGFGPVYKGVLNDDKEIAVKRLSRSSGQGLQEF---KNLIAKLQHKNLVRXXXX 112
E KLG G FG V+ N ++AVK + S ++ F N++ LQH LV+
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAV 245
Query: 113 XXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQL----DWNRR----MCII---NGIARDH 160
I E+M SL DFL D L D++ + M I N I RD
Sbjct: 246 VTKEPIYI-ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 304
Query: 161 K---------MNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVF 211
+ + KI+DFG+ARV G + + APE G F++KSDV+
Sbjct: 305 RAANILVSASLVCKIADFGLARV--GAKFPIK---------WTAPEAINFGSFTIKSDVW 353
Query: 212 SFGVLLLEIIS 222
SFG+LL+EI++
Sbjct: 354 SFGILLMEIVT 364
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 37/201 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLND-DKEIAVKRLSRSSGQGLQEF---KNLIAKLQHKNLV 107
+ + ++KLG G +G VY GV +AVK L + + ++EF ++ +++H NLV
Sbjct: 33 DITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 91
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL-DFL-------------LFDSTRS------------ 141
+ + EYMP +L D+L L+ +T+
Sbjct: 92 QLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNF 151
Query: 142 VQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
+ D R C++ +H + K++DFG++R+ G+ A+ + APE
Sbjct: 152 IHRDLAARNCLV---GENHVV--KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 205
Query: 202 GLFSVKSDVFSFGVLLLEIIS 222
FS+KSDV++FGVLL EI +
Sbjct: 206 NTFSIKSDVWAFGVLLWEIAT 226
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 32/194 (16%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSS--GQGLQEFKNLIA---KLQHKNLVRXXXX 112
K+G G FG V++ + ++AVK L + + EF +A +L+H N+V
Sbjct: 44 KIGAGSFGTVHRAEWHG-SDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 113 XXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIARD----HKMNP---- 164
+ EY+ SL LL S QLD RR+ + +A+ H NP
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVH 162
Query: 165 ----------------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKS 208
K+ DFG++R+ + ++ GT +MAPE + + KS
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSRLKAS--TFLSSKSAAGTPEWMAPEVLRDEPSNEKS 220
Query: 209 DVFSFGVLLLEIIS 222
DV+SFGV+L E+ +
Sbjct: 221 DVYSFGVILWELAT 234
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 119/286 (41%), Gaps = 62/286 (21%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSSGQG-------LQEFKN---L 97
A E ++G+GGFG V+KG L DK +A+K L +G QEF+ +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 98 IAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IING 155
++ L H N+V+ + E++P L L D ++ R+ I G
Sbjct: 77 MSNLNHPNIVK--LYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 156 IARDHKMNP-------------------------KISDFGMARVFGGNQSEANTNRVVGT 190
I NP K++DFG+++ QS + + ++G
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGLLGN 189
Query: 191 YGYMAPEY--ALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCE 248
+ +MAPE A E ++ K+D +SF ++L I++G + F Y G+ +
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILTG--EGPFDEYSYGKIKFINMIR---- 243
Query: 249 GNAQELMDPVLKESFILEELLKRI-HIGLLCVQEDPADRPTMSSVV 293
+E + P I E+ R+ ++ LC DP RP S +V
Sbjct: 244 ---EEGLRPT-----IPEDCPPRLRNVIELCWSGDPKKRPHFSYIV 281
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 32/196 (16%)
Query: 56 ENKLGEGGFGPVYKGVLNDDKEIAVKRLSRSS--GQGLQEFKNLIA---KLQHKNLVRXX 110
+ K+G G FG V++ + ++AVK L + + EF +A +L+H N+V
Sbjct: 42 KEKIGAGSFGTVHRAEWHG-SDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 111 XXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIARD----HKMNP-- 164
+ EY+ SL LL S QLD RR+ + +A+ H NP
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPI 160
Query: 165 ------------------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSV 206
K+ DFG++R+ + GT +MAPE + +
Sbjct: 161 VHRDLKSPNLLVDKKYTVKVCDFGLSRLKAS--XFLXSKXAAGTPEWMAPEVLRDEPSNE 218
Query: 207 KSDVFSFGVLLLEIIS 222
KSDV+SFGV+L E+ +
Sbjct: 219 KSDVYSFGVILWELAT 234
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 118/286 (41%), Gaps = 62/286 (21%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSSGQG-------LQEFKN---L 97
A E ++G+GGFG V+KG L DK +A+K L +G QEF+ +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 98 IAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IING 155
++ L H N+V+ + E++P L L D ++ R+ I G
Sbjct: 77 MSNLNHPNIVK--LYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 156 IARDHKMNP-------------------------KISDFGMARVFGGNQSEANTNRVVGT 190
I NP K++DFG ++ QS + + ++G
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVSGLLGN 189
Query: 191 YGYMAPEY--ALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCE 248
+ +MAPE A E ++ K+D +SF ++L I++G + F Y G+ +
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILTG--EGPFDEYSYGKIKFINMIR---- 243
Query: 249 GNAQELMDPVLKESFILEELLKRI-HIGLLCVQEDPADRPTMSSVV 293
+E + P I E+ R+ ++ LC DP RP S +V
Sbjct: 244 ---EEGLRPT-----IPEDCPPRLRNVIELCWSGDPKKRPHFSYIV 281
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 37/201 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLND-DKEIAVKRLSRSSGQGLQEF---KNLIAKLQHKNLV 107
+ + ++KLG G FG VY+GV +AVK L + + ++EF ++ +++H NLV
Sbjct: 12 DITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 70
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL-DFL-------------LFDSTRS------------ 141
+ I E+M +L D+L L+ +T+
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 142 VQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
+ D R C++ +H + K++DFG++R+ G+ A+ + APE
Sbjct: 131 IHRDLAARNCLV---GENHLV--KVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAY 184
Query: 202 GLFSVKSDVFSFGVLLLEIIS 222
FS+KSDV++FGVLL EI +
Sbjct: 185 NKFSIKSDVWAFGVLLWEIAT 205
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 118/286 (41%), Gaps = 62/286 (21%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSSGQG-------LQEFKN---L 97
A E ++G+GGFG V+KG L DK +A+K L +G QEF+ +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 98 IAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IING 155
++ L H N+V+ + E++P L L D ++ R+ I G
Sbjct: 77 MSNLNHPNIVK--LYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 156 IARDHKMNP-------------------------KISDFGMARVFGGNQSEANTNRVVGT 190
I NP K++DF +++ QS + + ++G
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSGLLGN 189
Query: 191 YGYMAPEY--ALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCE 248
+ +MAPE A E ++ K+D +SF ++L I++G + F Y G+ +
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILTG--EGPFDEYSYGKIKFINMIR---- 243
Query: 249 GNAQELMDPVLKESFILEELLKRI-HIGLLCVQEDPADRPTMSSVV 293
+E + P I E+ R+ ++ LC DP RP S +V
Sbjct: 244 ---EEGLRPT-----IPEDCPPRLRNVIELCWSGDPKKRPHFSYIV 281
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 111/271 (40%), Gaps = 55/271 (20%)
Query: 56 ENKLGEGGFGPVYKGVLNDDKEIAVKRLSRSSGQG--LQEFKNLIAKLQHKNLVRXXXXX 113
E +G G FG V K K++A+K++ S + + E + L +++ H N+V+
Sbjct: 14 EEVVGRGAFGVVCKAKWRA-KDVAIKQIESESERKAFIVELRQL-SRVNHPNIVKLYGAC 71
Query: 114 XXXXXXXXICEYMPNKSLDFLLFDS------TRSVQLDWNRRMCIINGIARDHKMNPK-- 165
+ EY SL +L + T + + W + G+A H M PK
Sbjct: 72 LNPVCL--VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCS--QGVAYLHSMQPKAL 127
Query: 166 --------------------ISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFS 205
I DFG A Q+ N+ G+ +MAPE +S
Sbjct: 128 IHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNNK--GSAAWMAPEVFEGSNYS 182
Query: 206 VKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFIL 265
K DVFS+G++L E+I+ RK E G W + G L+ + K +
Sbjct: 183 EKCDVFSWGIILWEVITRRKP----FDEIGGPAFRIMWAV-HNGTRPPLIKNLPKP---I 234
Query: 266 EELLKRIHIGLLCVQEDPADRPTMSSVVFML 296
E L+ R C +DP+ RP+M +V ++
Sbjct: 235 ESLMTR------CWSKDPSQRPSMEEIVKIM 259
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 37/201 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLND-DKEIAVKRLSRSSGQGLQEF---KNLIAKLQHKNLV 107
+ + ++KLG G +G VY+GV +AVK L + + ++EF ++ +++H NLV
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 70
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL-DFL-------------LFDSTRS------------ 141
+ I E+M +L D+L L+ +T+
Sbjct: 71 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 142 VQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
+ D R C++ +H + K++DFG++R+ G+ A+ + APE
Sbjct: 131 IHRDLAARNCLV---GENHLV--KVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAY 184
Query: 202 GLFSVKSDVFSFGVLLLEIIS 222
FS+KSDV++FGVLL EI +
Sbjct: 185 NKFSIKSDVWAFGVLLWEIAT 205
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 37/201 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLND-DKEIAVKRLSRSSGQGLQEF---KNLIAKLQHKNLV 107
+ + ++KLG G +G VY+GV +AVK L + + ++EF ++ +++H NLV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL-DFL-------------LFDSTRS------------ 141
+ I E+M +L D+L L+ +T+
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 142 VQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
+ D R C++ +H + K++DFG++R+ G+ A+ + APE
Sbjct: 138 IHRDLAARNCLV---GENHLV--KVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAY 191
Query: 202 GLFSVKSDVFSFGVLLLEIIS 222
FS+KSDV++FGVLL EI +
Sbjct: 192 NKFSIKSDVWAFGVLLWEIAT 212
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 111/271 (40%), Gaps = 55/271 (20%)
Query: 56 ENKLGEGGFGPVYKGVLNDDKEIAVKRLSRSSGQG--LQEFKNLIAKLQHKNLVRXXXXX 113
E +G G FG V K K++A+K++ S + + E + L +++ H N+V+
Sbjct: 13 EEVVGRGAFGVVCKAKWRA-KDVAIKQIESESERKAFIVELRQL-SRVNHPNIVKLYGAC 70
Query: 114 XXXXXXXXICEYMPNKSLDFLLFDS------TRSVQLDWNRRMCIINGIARDHKMNPK-- 165
+ EY SL +L + T + + W + G+A H M PK
Sbjct: 71 LNPVCL--VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCS--QGVAYLHSMQPKAL 126
Query: 166 --------------------ISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFS 205
I DFG A Q+ N+ G+ +MAPE +S
Sbjct: 127 IHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNNK--GSAAWMAPEVFEGSNYS 181
Query: 206 VKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFIL 265
K DVFS+G++L E+I+ RK E G W + G L+ + K +
Sbjct: 182 EKCDVFSWGIILWEVITRRKP----FDEIGGPAFRIMWAV-HNGTRPPLIKNLPKP---I 233
Query: 266 EELLKRIHIGLLCVQEDPADRPTMSSVVFML 296
E L+ R C +DP+ RP+M +V ++
Sbjct: 234 ESLMTR------CWSKDPSQRPSMEEIVKIM 258
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 119/280 (42%), Gaps = 47/280 (16%)
Query: 44 DLIHEATRNFSNENKLGEGGFGPVYKGV-LNDDKEIAVKRL-------SRSSGQGLQEFK 95
D+ + NF E K+G G F VY+ L D +A+K++ +++ ++E
Sbjct: 25 DMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEI- 83
Query: 96 NLIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLD-----WNRRM 150
+L+ +L H N+++ + E L ++ + +L W +
Sbjct: 84 DLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFV 143
Query: 151 CIINGIARDHK-------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYG 192
+ + + H + P K+ D G+ R F + A++ +VGT
Sbjct: 144 QLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPY 201
Query: 193 YMAPEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCEGNAQ 252
YM+PE E ++ KSD++S G LL E+ + + + FY G + Y+ C+ +
Sbjct: 202 YMSPERIHENGYNFKSDIWSLGCLLYEMAALQ--SPFY----GDKMNLYS---LCK-KIE 251
Query: 253 ELMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSV 292
+ P L EEL + ++ +C+ DP RP ++ V
Sbjct: 252 QCDYPPLPSDHYSEELRQLVN---MCINPDPEKRPDVTYV 288
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 37/201 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLND-DKEIAVKRLSRSSGQGLQEF---KNLIAKLQHKNLV 107
+ + ++KLG G +G VY+GV +AVK L + + ++EF ++ +++H NLV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL-DFL-------------LFDSTRS------------ 141
+ I E+M +L D+L L+ +T+
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 132
Query: 142 VQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
+ D R C++ +H + K++DFG++R+ G+ A+ + APE
Sbjct: 133 IHRDLAARNCLV---GENHLV--KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 186
Query: 202 GLFSVKSDVFSFGVLLLEIIS 222
FS+KSDV++FGVLL EI +
Sbjct: 187 NKFSIKSDVWAFGVLLWEIAT 207
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 37/201 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLND-DKEIAVKRLSRSSGQGLQEF---KNLIAKLQHKNLV 107
+ + ++KLG G +G VY+GV +AVK L + + ++EF ++ +++H NLV
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 73
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL-DFL-------------LFDSTRS------------ 141
+ I E+M +L D+L L+ +T+
Sbjct: 74 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 133
Query: 142 VQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
+ D R C++ +H + K++DFG++R+ G+ A+ + APE
Sbjct: 134 IHRDLAARNCLV---GENHLV--KVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAY 187
Query: 202 GLFSVKSDVFSFGVLLLEIIS 222
FS+KSDV++FGVLL EI +
Sbjct: 188 NKFSIKSDVWAFGVLLWEIAT 208
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 37/201 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLND-DKEIAVKRLSRSSGQGLQEF---KNLIAKLQHKNLV 107
+ + ++KLG G +G VY+GV +AVK L + + ++EF ++ +++H NLV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL-DFL-------------LFDSTRS------------ 141
+ I E+M +L D+L L+ +T+
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 132
Query: 142 VQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
+ D R C++ +H + K++DFG++R+ G+ A+ + APE
Sbjct: 133 IHRDLAARNCLV---GENHLV--KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 186
Query: 202 GLFSVKSDVFSFGVLLLEIIS 222
FS+KSDV++FGVLL EI +
Sbjct: 187 NKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 37/201 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLND-DKEIAVKRLSRSSGQGLQEF---KNLIAKLQHKNLV 107
+ + ++KLG G +G VY+GV +AVK L + + ++EF ++ +++H NLV
Sbjct: 18 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 76
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL-DFL-------------LFDSTRS------------ 141
+ I E+M +L D+L L+ +T+
Sbjct: 77 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 136
Query: 142 VQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
+ D R C++ +H + K++DFG++R+ G+ A+ + APE
Sbjct: 137 IHRDLAARNCLV---GENHLV--KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 190
Query: 202 GLFSVKSDVFSFGVLLLEIIS 222
FS+KSDV++FGVLL EI +
Sbjct: 191 NKFSIKSDVWAFGVLLWEIAT 211
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 37/201 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLND-DKEIAVKRLSRSSGQGLQEF---KNLIAKLQHKNLV 107
+ + ++KLG G +G VY+GV +AVK L + + ++EF ++ +++H NLV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL-DFL-------------LFDSTRS------------ 141
+ I E+M +L D+L L+ +T+
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 142 VQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
+ D R C++ +H + K++DFG++R+ G+ A+ + APE
Sbjct: 138 IHRDLAARNCLV---GENHLV--KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 191
Query: 202 GLFSVKSDVFSFGVLLLEIIS 222
FS+KSDV++FGVLL EI +
Sbjct: 192 NKFSIKSDVWAFGVLLWEIAT 212
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 37/201 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLND-DKEIAVKRLSRSSGQGLQEF---KNLIAKLQHKNLV 107
+ + ++KLG G +G VY+GV +AVK L + + ++EF ++ +++H NLV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL-DFL-------------LFDSTRS------------ 141
+ I E+M +L D+L L+ +T+
Sbjct: 78 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 142 VQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
+ D R C++ +H + K++DFG++R+ G+ A+ + APE
Sbjct: 138 IHRDLAARNCLV---GENHLV--KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 191
Query: 202 GLFSVKSDVFSFGVLLLEIIS 222
FS+KSDV++FGVLL EI +
Sbjct: 192 NKFSIKSDVWAFGVLLWEIAT 212
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 37/201 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLND-DKEIAVKRLSRSSGQGLQEF---KNLIAKLQHKNLV 107
+ + ++KLG G +G VY+GV +AVK L + + ++EF ++ +++H NLV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL-DFL-------------LFDSTRS------------ 141
+ I E+M +L D+L L+ +T+
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 142 VQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
+ D R C++ +H + K++DFG++R+ G+ A+ + APE
Sbjct: 133 IHRDLAARNCLV---GENHLV--KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 186
Query: 202 GLFSVKSDVFSFGVLLLEIIS 222
FS+KSDV++FGVLL EI +
Sbjct: 187 NKFSIKSDVWAFGVLLWEIAT 207
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 37/201 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLND-DKEIAVKRLSRSSGQGLQEF---KNLIAKLQHKNLV 107
+ + ++KLG G +G VY+GV +AVK L + + ++EF ++ +++H NLV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL-DFL-------------LFDSTRS------------ 141
+ I E+M +L D+L L+ +T+
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 142 VQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
+ D R C++ +H + K++DFG++R+ G+ A+ + APE
Sbjct: 133 IHRDLAARNCLV---GENHLV--KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 186
Query: 202 GLFSVKSDVFSFGVLLLEIIS 222
FS+KSDV++FGVLL EI +
Sbjct: 187 NKFSIKSDVWAFGVLLWEIAT 207
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 37/201 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLND-DKEIAVKRLSRSSGQGLQEF---KNLIAKLQHKNLV 107
+ + ++KLG G +G VY+GV +AVK L + + ++EF ++ +++H NLV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL-DFL-------------LFDSTRS------------ 141
+ I E+M +L D+L L+ +T+
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 137
Query: 142 VQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
+ D R C++ +H + K++DFG++R+ G+ A+ + APE
Sbjct: 138 IHRDLAARNCLV---GENHLV--KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 191
Query: 202 GLFSVKSDVFSFGVLLLEIIS 222
FS+KSDV++FGVLL EI +
Sbjct: 192 NKFSIKSDVWAFGVLLWEIAT 212
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 85/209 (40%), Gaps = 41/209 (19%)
Query: 56 ENKLGEGGFGPVYKGVLNDDKEIAVKRLSRSSGQGL-QEFKN------LIAKLQHKNLVR 108
E +G GGFG VY+ D E+AVK + + Q +N L A L+H N++
Sbjct: 12 EEIIGIGGFGKVYRAFWIGD-EVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 109 XXXXXXXXXXXXXICEYMPNKSLDFLLFDS--TRSVQLDWNRRMC----------IINGI 156
+ E+ L+ +L + ++W ++ I+ I
Sbjct: 71 LRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPII 130
Query: 157 ARDHKMNP-----------------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYA 199
RD K + KI+DFG+AR + G Y +MAPE
Sbjct: 131 HRDLKSSNILILQKVENGDLSNKILKITDFGLAREW----HRTTKMSAAGAYAWMAPEVI 186
Query: 200 LEGLFSVKSDVFSFGVLLLEIISGRKDTR 228
+FS SDV+S+GVLL E+++G R
Sbjct: 187 RASMFSKGSDVWSYGVLLWELLTGEVPFR 215
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 37/201 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLND-DKEIAVKRLSRSSGQGLQEF---KNLIAKLQHKNLV 107
+ + ++KLG G +G VY+GV +AVK L + + ++EF ++ +++H NLV
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 74
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL-DFL-------------LFDSTRS------------ 141
+ I E+M +L D+L L+ +T+
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 142 VQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
+ D R C++ +H + K++DFG++R+ G+ A+ + APE
Sbjct: 135 IHRDLAARNCLV---GENHLV--KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 188
Query: 202 GLFSVKSDVFSFGVLLLEIIS 222
FS+KSDV++FGVLL EI +
Sbjct: 189 NKFSIKSDVWAFGVLLWEIAT 209
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 37/201 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLND-DKEIAVKRLSRSSGQGLQEF---KNLIAKLQHKNLV 107
+ + ++KLG G +G VY+GV +AVK L + + ++EF ++ +++H NLV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL-DFL-------------LFDSTRS------------ 141
+ I E+M +L D+L L+ +T+
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 142 VQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
+ D R C++ +H + K++DFG++R+ G+ A+ + APE
Sbjct: 133 IHRDLAARNCLV---GENHLV--KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 186
Query: 202 GLFSVKSDVFSFGVLLLEIIS 222
FS+KSDV++FGVLL EI +
Sbjct: 187 NKFSIKSDVWAFGVLLWEIAT 207
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 37/201 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLND-DKEIAVKRLSRSSGQGLQEF---KNLIAKLQHKNLV 107
+ + ++KLG G +G VY+GV +AVK L + + ++EF ++ +++H NLV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL-DFL-------------LFDSTRS------------ 141
+ I E+M +L D+L L+ +T+
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 142 VQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
+ D R C++ +H + K++DFG++R+ G+ A+ + APE
Sbjct: 133 IHRDLAARNCLV---GENHLV--KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 186
Query: 202 GLFSVKSDVFSFGVLLLEIIS 222
FS+KSDV++FGVLL EI +
Sbjct: 187 NKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 37/201 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLND-DKEIAVKRLSRSSGQGLQEF---KNLIAKLQHKNLV 107
+ + ++KLG G +G VY+GV +AVK L + + ++EF ++ +++H NLV
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 74
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL-DFL-------------LFDSTRS------------ 141
+ I E+M +L D+L L+ +T+
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 142 VQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
+ D R C++ +H + K++DFG++R+ G+ A+ + APE
Sbjct: 135 IHRDLAARNCLV---GENHLV--KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 188
Query: 202 GLFSVKSDVFSFGVLLLEIIS 222
FS+KSDV++FGVLL EI +
Sbjct: 189 NKFSIKSDVWAFGVLLWEIAT 209
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 37/201 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLND-DKEIAVKRLSRSSGQGLQEF---KNLIAKLQHKNLV 107
+ + ++KLG G +G VY+GV +AVK L + + ++EF ++ +++H NLV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL-DFL-------------LFDSTRS------------ 141
+ I E+M +L D+L L+ +T+
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 142 VQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
+ D R C++ +H + K++DFG++R+ G+ A+ + APE
Sbjct: 138 IHRDLAARNCLV---GENHLV--KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 191
Query: 202 GLFSVKSDVFSFGVLLLEIIS 222
FS+KSDV++FGVLL EI +
Sbjct: 192 NKFSIKSDVWAFGVLLWEIAT 212
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 37/201 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLND-DKEIAVKRLSRSSGQGLQEF---KNLIAKLQHKNLV 107
+ + ++KLG G +G VY+GV +AVK L + + ++EF ++ +++H NLV
Sbjct: 27 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 85
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL-DFL-------------LFDSTRS------------ 141
+ I E+M +L D+L L+ +T+
Sbjct: 86 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 145
Query: 142 VQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
+ D R C++ +H + K++DFG++R+ G+ A+ + APE
Sbjct: 146 IHRDLAARNCLV---GENHLV--KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 199
Query: 202 GLFSVKSDVFSFGVLLLEIIS 222
FS+KSDV++FGVLL EI +
Sbjct: 200 NKFSIKSDVWAFGVLLWEIAT 220
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 87/218 (39%), Gaps = 39/218 (17%)
Query: 44 DLIHEATRNFSNENKLGEGGFGPVYKGVL----NDDK--EIAVKRLSR-SSGQGLQEF-- 94
DL +N + LG G FG VY+G + ND ++AVK L S Q +F
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 95 -KNLIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCII 153
+I+KL H+N+VR + E M L L ++ + M +
Sbjct: 84 EALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 143
Query: 154 NGIARD-----------HKMN------------------PKISDFGMARVFGGNQSEANT 184
+ARD H ++ KI DFGMAR
Sbjct: 144 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 203
Query: 185 NRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+ +M PE +EG+F+ K+D +SFGVLL EI S
Sbjct: 204 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 37/201 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLND-DKEIAVKRLSRSSGQGLQEF---KNLIAKLQHKNLV 107
+ + ++KLG G +G VY+GV +AVK L + + ++EF ++ +++H NLV
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 70
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL-DFL-------------LFDSTRS------------ 141
+ I E+M +L D+L L+ +T+
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 142 VQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
+ D R C++ +H + K++DFG++R+ G+ A+ + APE
Sbjct: 131 IHRDLAARNCLV---GENHLV--KVADFGLSRLMTGDTFTAHAGAKFPI-KWTAPESLAY 184
Query: 202 GLFSVKSDVFSFGVLLLEIIS 222
FS+KSDV++FGVLL EI +
Sbjct: 185 NKFSIKSDVWAFGVLLWEIAT 205
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 87/218 (39%), Gaps = 39/218 (17%)
Query: 44 DLIHEATRNFSNENKLGEGGFGPVYKGVL----NDDK--EIAVKRLSR-SSGQGLQEF-- 94
DL +N + LG G FG VY+G + ND ++AVK L S Q +F
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 97
Query: 95 -KNLIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCII 153
+I+KL H+N+VR + E M L L ++ + M +
Sbjct: 98 EALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 154 NGIARD-----------HKMN------------------PKISDFGMARVFGGNQSEANT 184
+ARD H ++ KI DFGMAR
Sbjct: 158 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 217
Query: 185 NRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+ +M PE +EG+F+ K+D +SFGVLL EI S
Sbjct: 218 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 25/192 (13%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSSGQGLQEFKN---LIAKLQHKN--LVRXXXX 112
++G G FG VYKG + D + + ++ + Q LQ FKN ++ K +H N L
Sbjct: 15 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 74
Query: 113 XXXXXXXXXICE--------YMPNKSLDFL-LFDSTRSVQ--LDWNRRMCII------NG 155
CE ++ + + L D R +D+ II N
Sbjct: 75 APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNN 134
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYAL---EGLFSVKSDVFS 212
I + KI DFG+A V ++ G+ +MAPE + +S +SDV++
Sbjct: 135 IFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 194
Query: 213 FGVLLLEIISGR 224
FG++L E+++G+
Sbjct: 195 FGIVLYELMTGQ 206
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 25/192 (13%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSSGQGLQEFKN---LIAKLQHKN--LVRXXXX 112
++G G FG VYKG + D + + ++ + Q LQ FKN ++ K +H N L
Sbjct: 15 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 74
Query: 113 XXXXXXXXXICE--------YMPNKSLDFL-LFDSTRSVQ--LDWNRRMCII------NG 155
CE ++ + + L D R +D+ II N
Sbjct: 75 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNN 134
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYAL---EGLFSVKSDVFS 212
I + KI DFG+A V ++ G+ +MAPE + +S +SDV++
Sbjct: 135 IFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 194
Query: 213 FGVLLLEIISGR 224
FG++L E+++G+
Sbjct: 195 FGIVLYELMTGQ 206
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 37/201 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLND-DKEIAVKRLSRSSGQGLQEF---KNLIAKLQHKNLV 107
+ + ++KLG G +G VY+GV +AVK L + + ++EF ++ +++H NLV
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 73
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL-DFL-------------LFDSTRS------------ 141
+ I E+M +L D+L L+ +T+
Sbjct: 74 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 133
Query: 142 VQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
+ D R C++ +H + K++DFG++R+ G+ A + APE
Sbjct: 134 IHRDLAARNCLV---GENHLV--KVADFGLSRLMTGDTYTAPAGAKFPI-KWTAPESLAY 187
Query: 202 GLFSVKSDVFSFGVLLLEIIS 222
FS+KSDV++FGVLL EI +
Sbjct: 188 NKFSIKSDVWAFGVLLWEIAT 208
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 25/192 (13%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSSGQGLQEFKN---LIAKLQHKN--LVRXXXX 112
++G G FG VYKG + D + + ++ + Q LQ FKN ++ K +H N L
Sbjct: 17 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 76
Query: 113 XXXXXXXXXICE--------YMPNKSLDFL-LFDSTRSVQ--LDWNRRMCII------NG 155
CE ++ + + L D R +D+ II N
Sbjct: 77 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNN 136
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYAL---EGLFSVKSDVFS 212
I + KI DFG+A V ++ G+ +MAPE + +S +SDV++
Sbjct: 137 IFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 196
Query: 213 FGVLLLEIISGR 224
FG++L E+++G+
Sbjct: 197 FGIVLYELMTGQ 208
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 37/201 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLND-DKEIAVKRLSRSSGQGLQEF---KNLIAKLQHKNLV 107
+ + ++KLG G +G VY+GV +AVK L + + ++EF ++ +++H NLV
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 74
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL-DFL-------------LFDSTRS------------ 141
+ I E+M +L D+L L+ +T+
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 142 VQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
+ D R C++ +H + K++DFG++R+ G+ A + APE
Sbjct: 135 IHRDLAARNCLV---GENHLV--KVADFGLSRLMTGDTYTAPAGAKFPI-KWTAPESLAY 188
Query: 202 GLFSVKSDVFSFGVLLLEIIS 222
FS+KSDV++FGVLL EI +
Sbjct: 189 NKFSIKSDVWAFGVLLWEIAT 209
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 25/192 (13%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSSGQGLQEFKN---LIAKLQHKN--LVRXXXX 112
++G G FG VYKG + D + + ++ + Q LQ FKN ++ K +H N L
Sbjct: 20 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 79
Query: 113 XXXXXXXXXICE--------YMPNKSLDFL-LFDSTRSVQ--LDWNRRMCII------NG 155
CE ++ + + L D R +D+ II N
Sbjct: 80 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNN 139
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYAL---EGLFSVKSDVFS 212
I + KI DFG+A V ++ G+ +MAPE + +S +SDV++
Sbjct: 140 IFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 199
Query: 213 FGVLLLEIISGR 224
FG++L E+++G+
Sbjct: 200 FGIVLYELMTGQ 211
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 115/291 (39%), Gaps = 53/291 (18%)
Query: 42 PLDLIHEATR-----NFSNENKLGEGGFGPVYKGVLN--DDKEIAVKRLSRSSGQGLQEF 94
P +HE + N S + +G G FG V G L KEI+V + G ++
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 95 KN------LIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNR 148
++ ++ + H N++R + EYM N SLD L Q +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQ 148
Query: 149 RMCIINGIARDHK----------------------MNPKISDFGMARVFGGNQSEANTNR 186
+ ++ GIA K + K+SDFG+ARV + A T R
Sbjct: 149 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTR 208
Query: 187 VVGT-YGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKL 245
+ +PE F+ SDV+S+G++L E++S R Y Q ++ K
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVI----KA 262
Query: 246 WCEGNAQELMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSVVFML 296
EG + P + L +L+ L C Q+D +RP +V +L
Sbjct: 263 VDEGYR---LPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 31/196 (15%)
Query: 58 KLGEGGFGPV----YKGVLNDDKEI-AVKRLSRSSGQGLQEFK---NLIAKLQHKNLVRX 109
+LG+G FG V Y + ++ E+ AVK+L S+ + L++F+ ++ LQH N+V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 110 XXXXXXX--XXXXXICEYMPNKSL-DFLLFDSTRSVQ---LDWNRRMC------------ 151
I EY+P SL D+L + R L + ++C
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRYI 139
Query: 152 ----IINGIARDHKMNPKISDFGMARVFGGNQSEANTNRV-VGTYGYMAPEYALEGLFSV 206
I +++ KI DFG+ +V ++ + APE E FSV
Sbjct: 140 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 199
Query: 207 KSDVFSFGVLLLEIIS 222
SDV+SFGV+L E+ +
Sbjct: 200 ASDVWSFGVVLYELFT 215
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 25/192 (13%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSSGQGLQEFKN---LIAKLQHKN--LVRXXXX 112
++G G FG VYKG + D + + ++ + Q LQ FKN ++ K +H N L
Sbjct: 20 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 79
Query: 113 XXXXXXXXXICE--------YMPNKSLDFL-LFDSTRSVQ--LDWNRRMCII------NG 155
CE ++ + + L D R +D+ II N
Sbjct: 80 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNN 139
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYAL---EGLFSVKSDVFS 212
I + KI DFG+A V ++ G+ +MAPE + +S +SDV++
Sbjct: 140 IFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 199
Query: 213 FGVLLLEIISGR 224
FG++L E+++G+
Sbjct: 200 FGIVLYELMTGQ 211
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 105/268 (39%), Gaps = 56/268 (20%)
Query: 57 NKLGEGGFGPVYKGVLNDDKEIAVKRL---SRSSGQGLQEFKNLIAKLQHKNLVRXXXXX 113
+LG G FG V G ++AVK + S S + QE + ++ KL H LV+
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMM-KLSHPKLVKFYGVC 72
Query: 114 XXXXXXXXICEYMPNKSL-DFL------------------------LFDSTRSVQLDWNR 148
+ EY+ N L ++L +S + + D
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAA 132
Query: 149 RMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGT---YGYMAPEYALEGLFS 205
R C++ D + K+SDFGM R +Q ++ VGT + APE +S
Sbjct: 133 RNCLV-----DRDLCVKVSDFGMTRYVLDDQYVSS----VGTKFPVKWSAPEVFHYFKYS 183
Query: 206 VKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFIL 265
KSDV++FG+L+ E+ S K + LY + +L + L P L I
Sbjct: 184 SKSDVWAFGILMWEVFSLGK-MPYDLYTNSEVVLKVS-------QGHRLYRPHLASDTIY 235
Query: 266 EELLKRIHIGLLCVQEDPADRPTMSSVV 293
+ I C E P RPT ++
Sbjct: 236 Q-------IMYSCWHELPEKRPTFQQLL 256
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 86/218 (39%), Gaps = 39/218 (17%)
Query: 44 DLIHEATRNFSNENKLGEGGFGPVYKGVL----NDDK--EIAVKRLSR-SSGQGLQEF-- 94
DL +N + LG G FG VY+G + ND ++AVK L S Q +F
Sbjct: 50 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 109
Query: 95 -KNLIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCII 153
+I+K H+N+VR + E M L L ++ + M +
Sbjct: 110 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 169
Query: 154 NGIARD-----------HKMN------------------PKISDFGMARVFGGNQSEANT 184
+ARD H ++ KI DFGMAR
Sbjct: 170 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 229
Query: 185 NRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+ +M PE +EG+F+ K+D +SFGVLL EI S
Sbjct: 230 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 30/193 (15%)
Query: 59 LGEGGFGPVYKGVLNDDKE-----IAVKRLSRSSGQGLQ-EFKN---LIAKLQHKNLVRX 109
LG G FG VYKG+ + E +A+K L+ ++G EF + ++A + H +LVR
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 110 XXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ----LDW------------NRRMCII 153
+ + MP+ L + + ++ L+W RR+
Sbjct: 106 LGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHR 164
Query: 154 NGIARD----HKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSD 209
+ AR+ + KI+DFG+AR+ G++ E N + +MA E F+ +SD
Sbjct: 165 DLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSD 224
Query: 210 VFSFGVLLLEIIS 222
V+S+GV + E+++
Sbjct: 225 VWSYGVTIWELMT 237
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 95/193 (49%), Gaps = 29/193 (15%)
Query: 56 ENKLGEGGFGPVYKGVLND-DKEIAVKRLSRSSGQGLQEF---KNLIAKLQHKNLVRXXX 111
++KLG G +G VY+GV +AVK L + + ++EF ++ +++H NLV+
Sbjct: 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 283
Query: 112 XXXXXXXXXXICEYMPNKSL-DFL-------------LFDSTR-SVQLDW-------NRR 149
I E+M +L D+L L+ +T+ S +++ +R
Sbjct: 284 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRN 343
Query: 150 MCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSD 209
+ N + ++ + K++DFG++R+ G+ A+ + APE FS+KSD
Sbjct: 344 LAARNCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSD 401
Query: 210 VFSFGVLLLEIIS 222
V++FGVLL EI +
Sbjct: 402 VWAFGVLLWEIAT 414
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 86/218 (39%), Gaps = 39/218 (17%)
Query: 44 DLIHEATRNFSNENKLGEGGFGPVYKGVL----NDDK--EIAVKRLSR-SSGQGLQEF-- 94
DL +N + LG G FG VY+G + ND ++AVK L S Q +F
Sbjct: 40 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 99
Query: 95 -KNLIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCII 153
+I+K H+N+VR + E M L L ++ + M +
Sbjct: 100 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 159
Query: 154 NGIARD-----------HKMN------------------PKISDFGMARVFGGNQSEANT 184
+ARD H ++ KI DFGMAR
Sbjct: 160 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 219
Query: 185 NRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+ +M PE +EG+F+ K+D +SFGVLL EI S
Sbjct: 220 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 109/289 (37%), Gaps = 54/289 (18%)
Query: 44 DLIHEATRNFSNENKLGEGGFGPVYKGVL----NDDK--EIAVKRLSR-SSGQGLQEF-- 94
DL +N + LG G FG VY+G + ND ++AVK L S Q +F
Sbjct: 15 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 74
Query: 95 -KNLIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCII 153
+I+K H+N+VR + E M L L ++ + M +
Sbjct: 75 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 134
Query: 154 NGIARD-----------HKMN------------------PKISDFGMARVFGGNQSEANT 184
+ARD H ++ KI DFGMAR
Sbjct: 135 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 194
Query: 185 NRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWK 244
+ +M PE +EG+F+ K+D +SFGVLL EI S Y + Q +L +
Sbjct: 195 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQEVLEFV-- 250
Query: 245 LWCEGNAQELMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSVV 293
+ MDP + ++ + C Q P DRP + ++
Sbjct: 251 -----TSGGRMDPPKNCPGPVYRIMTQ------CWQHQPEDRPNFAIIL 288
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 86/218 (39%), Gaps = 39/218 (17%)
Query: 44 DLIHEATRNFSNENKLGEGGFGPVYKGVL----NDDK--EIAVKRLSR-SSGQGLQEF-- 94
DL +N + LG G FG VY+G + ND ++AVK L S Q +F
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 95 -KNLIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCII 153
+I+K H+N+VR + E M L L ++ + M +
Sbjct: 84 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 143
Query: 154 NGIARD-----------HKMN------------------PKISDFGMARVFGGNQSEANT 184
+ARD H ++ KI DFGMAR
Sbjct: 144 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 203
Query: 185 NRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+ +M PE +EG+F+ K+D +SFGVLL EI S
Sbjct: 204 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 86/218 (39%), Gaps = 39/218 (17%)
Query: 44 DLIHEATRNFSNENKLGEGGFGPVYKGVL----NDDK--EIAVKRLSR-SSGQGLQEF-- 94
DL +N + LG G FG VY+G + ND ++AVK L S Q +F
Sbjct: 30 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 89
Query: 95 -KNLIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCII 153
+I+K H+N+VR + E M L L ++ + M +
Sbjct: 90 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 149
Query: 154 NGIARD-----------HKMN------------------PKISDFGMARVFGGNQSEANT 184
+ARD H ++ KI DFGMAR
Sbjct: 150 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 209
Query: 185 NRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+ +M PE +EG+F+ K+D +SFGVLL EI S
Sbjct: 210 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 25/192 (13%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSSGQGLQEFKN---LIAKLQHKN--LVRXXXX 112
++G G FG VYKG + D + + ++ + Q LQ FKN ++ K +H N L
Sbjct: 42 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 101
Query: 113 XXXXXXXXXICE--------YMPNKSLDFL-LFDSTRSVQ--LDWNRRMCII------NG 155
CE ++ + + L D R +D+ II N
Sbjct: 102 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNN 161
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYAL---EGLFSVKSDVFS 212
I + KI DFG+A V ++ G+ +MAPE + +S +SDV++
Sbjct: 162 IFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 221
Query: 213 FGVLLLEIISGR 224
FG++L E+++G+
Sbjct: 222 FGIVLYELMTGQ 233
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 27/192 (14%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSSGQGLQEFKNLIA---KLQHKNLVRXXXXXX 114
++G G FG VYKG + D + + ++ + + Q F+N +A K +H N++
Sbjct: 43 RIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNIL-LFMGYM 101
Query: 115 XXXXXXXICEYMPNKSLD------------FLLFDSTRSVQ--LDWNRRMCII------N 154
+ ++ SL F L D R +D+ II N
Sbjct: 102 TKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSN 161
Query: 155 GIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYAL---EGLFSVKSDVF 211
I + KI DFG+A V + G+ +MAPE FS +SDV+
Sbjct: 162 NIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVY 221
Query: 212 SFGVLLLEIISG 223
S+G++L E+++G
Sbjct: 222 SYGIVLYELMTG 233
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 25/192 (13%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSSGQGLQEFKN---LIAKLQHKN--LVRXXXX 112
++G G FG VYKG + D + + ++ + Q LQ FKN ++ K +H N L
Sbjct: 43 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 102
Query: 113 XXXXXXXXXICE--------YMPNKSLDFL-LFDSTRSVQ--LDWNRRMCII------NG 155
CE ++ + + L D R +D+ II N
Sbjct: 103 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNN 162
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYAL---EGLFSVKSDVFS 212
I + KI DFG+A V ++ G+ +MAPE + +S +SDV++
Sbjct: 163 IFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 222
Query: 213 FGVLLLEIISGR 224
FG++L E+++G+
Sbjct: 223 FGIVLYELMTGQ 234
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 86/218 (39%), Gaps = 39/218 (17%)
Query: 44 DLIHEATRNFSNENKLGEGGFGPVYKGVL----NDDK--EIAVKRLSR-SSGQGLQEF-- 94
DL +N + LG G FG VY+G + ND ++AVK L S Q +F
Sbjct: 23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 82
Query: 95 -KNLIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCII 153
+I+K H+N+VR + E M L L ++ + M +
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL 142
Query: 154 NGIARD-----------HKMN------------------PKISDFGMARVFGGNQSEANT 184
+ARD H ++ KI DFGMAR
Sbjct: 143 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 202
Query: 185 NRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+ +M PE +EG+F+ K+D +SFGVLL EI S
Sbjct: 203 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 86/218 (39%), Gaps = 39/218 (17%)
Query: 44 DLIHEATRNFSNENKLGEGGFGPVYKGVL----NDDK--EIAVKRLSR-SSGQGLQEF-- 94
DL +N + LG G FG VY+G + ND ++AVK L S Q +F
Sbjct: 23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 82
Query: 95 -KNLIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCII 153
+I+K H+N+VR + E M L L ++ + M +
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 142
Query: 154 NGIARD-----------HKMN------------------PKISDFGMARVFGGNQSEANT 184
+ARD H ++ KI DFGMAR
Sbjct: 143 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 202
Query: 185 NRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+ +M PE +EG+F+ K+D +SFGVLL EI S
Sbjct: 203 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 120/300 (40%), Gaps = 60/300 (20%)
Query: 54 SNENKLGEGGFGPVYKGVL---NDDKEIAVKRLSRSSGQGLQEFKN------LIAKLQHK 104
+ + +G G FG VYKG+L + KE+ V + +G ++ + ++ + H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 105 NLVRXXXXXXXXXXXXXICEYMPNKSLDFLLF--DSTRSV------------------QL 144
N++R I EYM N +LD L D SV +
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM 166
Query: 145 DWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYG--YMAPEYALEG 202
++ R I + + K+SDFG++RV + EA G + APE
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLE-DDPEATYTTSGGKIPIRWTAPEAISYR 225
Query: 203 LFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLKES 262
F+ SDV+SFG+++ E+ +TY + + E + E+M + +
Sbjct: 226 KFTSASDVWSFGIVMWEV------------------MTYGERPYWELSNHEVMK-AINDG 266
Query: 263 FILEELL----KRIHIGLLCVQEDPADRPTMSSVVFML-----ATDTITLLQPTQPAFSV 313
F L + + + C Q++ A RP + +V +L A D++ L P S+
Sbjct: 267 FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLKTLADFDPRVSI 326
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 30/193 (15%)
Query: 59 LGEGGFGPVYKGVLNDDKE-----IAVKRLSRSSGQGLQ-EFKN---LIAKLQHKNLVRX 109
LG G FG VYKG+ + E +A+K L+ ++G EF + ++A + H +LVR
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 110 XXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ----LDW------------NRRMCII 153
+ + MP+ L + + ++ L+W RR+
Sbjct: 83 LGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHR 141
Query: 154 NGIARD----HKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSD 209
+ AR+ + KI+DFG+AR+ G++ E N + +MA E F+ +SD
Sbjct: 142 DLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSD 201
Query: 210 VFSFGVLLLEIIS 222
V+S+GV + E+++
Sbjct: 202 VWSYGVTIWELMT 214
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 95/193 (49%), Gaps = 29/193 (15%)
Query: 56 ENKLGEGGFGPVYKGVLND-DKEIAVKRLSRSSGQGLQEF---KNLIAKLQHKNLVRXXX 111
++KLG G +G VY+GV +AVK L + + ++EF ++ +++H NLV+
Sbjct: 264 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 322
Query: 112 XXXXXXXXXXICEYMPNKSL-DFL-------------LFDSTR-SVQLDW-------NRR 149
I E+M +L D+L L+ +T+ S +++ +R
Sbjct: 323 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRN 382
Query: 150 MCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSD 209
+ N + ++ + K++DFG++R+ G+ A+ + APE FS+KSD
Sbjct: 383 LAARNCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSD 440
Query: 210 VFSFGVLLLEIIS 222
V++FGVLL EI +
Sbjct: 441 VWAFGVLLWEIAT 453
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 95/193 (49%), Gaps = 29/193 (15%)
Query: 56 ENKLGEGGFGPVYKGVLND-DKEIAVKRLSRSSGQGLQEF---KNLIAKLQHKNLVRXXX 111
++KLG G +G VY+GV +AVK L + + ++EF ++ +++H NLV+
Sbjct: 222 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 280
Query: 112 XXXXXXXXXXICEYMPNKSL-DFL-------------LFDSTR-SVQLDW-------NRR 149
I E+M +L D+L L+ +T+ S +++ +R
Sbjct: 281 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRN 340
Query: 150 MCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSD 209
+ N + ++ + K++DFG++R+ G+ A+ + APE FS+KSD
Sbjct: 341 LAARNCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIKSD 398
Query: 210 VFSFGVLLLEIIS 222
V++FGVLL EI +
Sbjct: 399 VWAFGVLLWEIAT 411
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 31/196 (15%)
Query: 58 KLGEGGFGPV----YKGVLNDDKEI-AVKRLSRSSGQGLQEFK---NLIAKLQHKNLVRX 109
+LG+G FG V Y + ++ E+ AVK+L S+ + L++F+ ++ LQH N+V+
Sbjct: 21 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 110 XXXXXXX--XXXXXICEYMPNKSL-DFLLFDSTRSVQ---LDWNRRMC------------ 151
I EY+P SL D+L R L + ++C
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 140
Query: 152 ----IINGIARDHKMNPKISDFGMARVFGGNQSEANTNRV-VGTYGYMAPEYALEGLFSV 206
I +++ KI DFG+ +V ++ + APE E FSV
Sbjct: 141 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 200
Query: 207 KSDVFSFGVLLLEIIS 222
SDV+SFGV+L E+ +
Sbjct: 201 ASDVWSFGVVLYELFT 216
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 86/218 (39%), Gaps = 39/218 (17%)
Query: 44 DLIHEATRNFSNENKLGEGGFGPVYKGVL----NDDK--EIAVKRLSR-SSGQGLQEF-- 94
DL +N + LG G FG VY+G + ND ++AVK L S Q +F
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 97
Query: 95 -KNLIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCII 153
+I+K H+N+VR + E M L L ++ + M +
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 154 NGIARD-----------HKMN------------------PKISDFGMARVFGGNQSEANT 184
+ARD H ++ KI DFGMAR
Sbjct: 158 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 217
Query: 185 NRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+ +M PE +EG+F+ K+D +SFGVLL EI S
Sbjct: 218 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 31/196 (15%)
Query: 58 KLGEGGFGPV----YKGVLNDDKEI-AVKRLSRSSGQGLQEFK---NLIAKLQHKNLVRX 109
+LG+G FG V Y + ++ E+ AVK+L S+ + L++F+ ++ LQH N+V+
Sbjct: 16 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 110 XXXXXXX--XXXXXICEYMPNKSL-DFLLFDSTRSVQ---LDWNRRMC------------ 151
I EY+P SL D+L R L + ++C
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 135
Query: 152 ----IINGIARDHKMNPKISDFGMARVFGGNQSEANTNRV-VGTYGYMAPEYALEGLFSV 206
I +++ KI DFG+ +V ++ + APE E FSV
Sbjct: 136 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 195
Query: 207 KSDVFSFGVLLLEIIS 222
SDV+SFGV+L E+ +
Sbjct: 196 ASDVWSFGVVLYELFT 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 31/196 (15%)
Query: 58 KLGEGGFGPV----YKGVLNDDKEI-AVKRLSRSSGQGLQEFK---NLIAKLQHKNLVRX 109
+LG+G FG V Y + ++ E+ AVK+L S+ + L++F+ ++ LQH N+V+
Sbjct: 15 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 110 XXXXXXX--XXXXXICEYMPNKSL-DFLLFDSTRSVQ---LDWNRRMC------------ 151
I EY+P SL D+L R L + ++C
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 134
Query: 152 ----IINGIARDHKMNPKISDFGMARVFGGNQSEANTNRV-VGTYGYMAPEYALEGLFSV 206
I +++ KI DFG+ +V ++ + APE E FSV
Sbjct: 135 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 194
Query: 207 KSDVFSFGVLLLEIIS 222
SDV+SFGV+L E+ +
Sbjct: 195 ASDVWSFGVVLYELFT 210
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 85/233 (36%), Gaps = 53/233 (22%)
Query: 47 HEATRNFSNENKLGEGGFGPVYKGVLN------DDKEIAVKRLSRSSGQGLQEFK---NL 97
H R+ + +LGEG FG V+ + D +AVK L +S Q+F+ L
Sbjct: 14 HIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAEL 73
Query: 98 IAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLL---------------------- 135
+ LQH+++VR + EYM + L+ L
Sbjct: 74 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 133
Query: 136 -----------------FDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGN 178
V D R C++ + KI DFGM+R
Sbjct: 134 LGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG-----QGLVVKIGDFGMSRDIYST 188
Query: 179 QSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYL 231
R + +M PE L F+ +SDV+SFGV+L EI + K + L
Sbjct: 189 DYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL 241
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 85/233 (36%), Gaps = 53/233 (22%)
Query: 47 HEATRNFSNENKLGEGGFGPVYKGVLN------DDKEIAVKRLSRSSGQGLQEFK---NL 97
H R+ + +LGEG FG V+ + D +AVK L +S Q+F+ L
Sbjct: 8 HIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAEL 67
Query: 98 IAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLL---------------------- 135
+ LQH+++VR + EYM + L+ L
Sbjct: 68 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 127
Query: 136 -----------------FDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGN 178
V D R C++ + KI DFGM+R
Sbjct: 128 LGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG-----QGLVVKIGDFGMSRDIYST 182
Query: 179 QSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYL 231
R + +M PE L F+ +SDV+SFGV+L EI + K + L
Sbjct: 183 DYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL 235
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 86/218 (39%), Gaps = 39/218 (17%)
Query: 44 DLIHEATRNFSNENKLGEGGFGPVYKGVL----NDDK--EIAVKRLSR-SSGQGLQEF-- 94
DL +N + LG G FG VY+G + ND ++AVK L S Q +F
Sbjct: 64 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 123
Query: 95 -KNLIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCII 153
+I+K H+N+VR + E M L L ++ + M +
Sbjct: 124 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 183
Query: 154 NGIARD-----------HKMN------------------PKISDFGMARVFGGNQSEANT 184
+ARD H ++ KI DFGMAR
Sbjct: 184 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKG 243
Query: 185 NRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+ +M PE +EG+F+ K+D +SFGVLL EI S
Sbjct: 244 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 31/196 (15%)
Query: 58 KLGEGGFGPV----YKGVLNDDKEI-AVKRLSRSSGQGLQEFK---NLIAKLQHKNLVRX 109
+LG+G FG V Y + ++ E+ AVK+L S+ + L++F+ ++ LQH N+V+
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 110 XXXXXXX--XXXXXICEYMPNKSL-DFLLFDSTRSVQ---LDWNRRMC------------ 151
I EY+P SL D+L R L + ++C
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 136
Query: 152 ----IINGIARDHKMNPKISDFGMARVFGGNQSEANTNRV-VGTYGYMAPEYALEGLFSV 206
I +++ KI DFG+ +V ++ + APE E FSV
Sbjct: 137 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 196
Query: 207 KSDVFSFGVLLLEIIS 222
SDV+SFGV+L E+ +
Sbjct: 197 ASDVWSFGVVLYELFT 212
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 31/196 (15%)
Query: 58 KLGEGGFGPV----YKGVLNDDKEI-AVKRLSRSSGQGLQEFK---NLIAKLQHKNLVRX 109
+LG+G FG V Y + ++ E+ AVK+L S+ + L++F+ ++ LQH N+V+
Sbjct: 48 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 110 XXX--XXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQ---LDWNRRMC------------ 151
I EY+P SL D+L R L + ++C
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 167
Query: 152 ----IINGIARDHKMNPKISDFGMARVFGGNQSEANTNRV-VGTYGYMAPEYALEGLFSV 206
I +++ KI DFG+ +V ++ + APE E FSV
Sbjct: 168 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 227
Query: 207 KSDVFSFGVLLLEIIS 222
SDV+SFGV+L E+ +
Sbjct: 228 ASDVWSFGVVLYELFT 243
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 31/196 (15%)
Query: 58 KLGEGGFGPV----YKGVLNDDKEI-AVKRLSRSSGQGLQEFK---NLIAKLQHKNLVRX 109
+LG+G FG V Y + ++ E+ AVK+L S+ + L++F+ ++ LQH N+V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 110 XXX--XXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQ---LDWNRRMC------------ 151
I EY+P SL D+L R L + ++C
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 139
Query: 152 ----IINGIARDHKMNPKISDFGMARVFGGNQSEANTNRV-VGTYGYMAPEYALEGLFSV 206
I +++ KI DFG+ +V ++ + APE E FSV
Sbjct: 140 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 199
Query: 207 KSDVFSFGVLLLEIIS 222
SDV+SFGV+L E+ +
Sbjct: 200 ASDVWSFGVVLYELFT 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 31/196 (15%)
Query: 58 KLGEGGFGPV----YKGVLNDDKEI-AVKRLSRSSGQGLQEFK---NLIAKLQHKNLVRX 109
+LG+G FG V Y + ++ E+ AVK+L S+ + L++F+ ++ LQH N+V+
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 110 XXXXXXX--XXXXXICEYMPNKSL-DFLLFDSTRSVQ---LDWNRRMC------------ 151
I EY+P SL D+L R L + ++C
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 136
Query: 152 ----IINGIARDHKMNPKISDFGMARVFGGNQSEANTNRV-VGTYGYMAPEYALEGLFSV 206
I +++ KI DFG+ +V ++ + APE E FSV
Sbjct: 137 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 196
Query: 207 KSDVFSFGVLLLEIIS 222
SDV+SFGV+L E+ +
Sbjct: 197 ASDVWSFGVVLYELFT 212
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 86/218 (39%), Gaps = 39/218 (17%)
Query: 44 DLIHEATRNFSNENKLGEGGFGPVYKGVL----NDDK--EIAVKRLSR-SSGQGLQEF-- 94
DL +N + LG G FG VY+G + ND ++AVK L S Q +F
Sbjct: 41 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 100
Query: 95 -KNLIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCII 153
+I+K H+N+VR + E M L L ++ + M +
Sbjct: 101 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 160
Query: 154 NGIARD-----------HKMN------------------PKISDFGMARVFGGNQSEANT 184
+ARD H ++ KI DFGMAR
Sbjct: 161 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKG 220
Query: 185 NRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+ +M PE +EG+F+ K+D +SFGVLL EI S
Sbjct: 221 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 31/196 (15%)
Query: 58 KLGEGGFGPV----YKGVLNDDKEI-AVKRLSRSSGQGLQEFK---NLIAKLQHKNLVRX 109
+LG+G FG V Y + ++ E+ AVK+L S+ + L++F+ ++ LQH N+V+
Sbjct: 23 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 110 XXXXXXX--XXXXXICEYMPNKSL-DFLLFDSTRSVQ---LDWNRRMC------------ 151
I EY+P SL D+L R L + ++C
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 142
Query: 152 ----IINGIARDHKMNPKISDFGMARVFGGNQSEANTNRV-VGTYGYMAPEYALEGLFSV 206
I +++ KI DFG+ +V ++ + APE E FSV
Sbjct: 143 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 202
Query: 207 KSDVFSFGVLLLEIIS 222
SDV+SFGV+L E+ +
Sbjct: 203 ASDVWSFGVVLYELFT 218
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 31/196 (15%)
Query: 58 KLGEGGFGPV----YKGVLNDDKEI-AVKRLSRSSGQGLQEFK---NLIAKLQHKNLVRX 109
+LG+G FG V Y + ++ E+ AVK+L S+ + L++F+ ++ LQH N+V+
Sbjct: 24 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 110 XXX--XXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQ---LDWNRRMC------------ 151
I EY+P SL D+L R L + ++C
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 143
Query: 152 ----IINGIARDHKMNPKISDFGMARVFGGNQSEANTNRV-VGTYGYMAPEYALEGLFSV 206
I +++ KI DFG+ +V ++ + APE E FSV
Sbjct: 144 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 203
Query: 207 KSDVFSFGVLLLEIIS 222
SDV+SFGV+L E+ +
Sbjct: 204 ASDVWSFGVVLYELFT 219
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 115/291 (39%), Gaps = 53/291 (18%)
Query: 42 PLDLIHEATR-----NFSNENKLGEGGFGPVYKGVLN--DDKEIAVKRLSRSSGQGLQEF 94
P +HE + N S + +G G FG V G L KEI+V + G ++
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 95 KN------LIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNR 148
++ ++ + H N++R + EYM N SLD L Q +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQ 148
Query: 149 RMCIINGIARDHK----------------------MNPKISDFGMARVFGGNQSEANTNR 186
+ ++ GIA K + K+SDFG++RV + A T R
Sbjct: 149 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 187 VVGT-YGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKL 245
+ +PE F+ SDV+S+G++L E++S R Y Q ++ K
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVI----KA 262
Query: 246 WCEGNAQELMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSVVFML 296
EG + P + L +L+ L C Q+D +RP +V +L
Sbjct: 263 VDEGYR---LPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 115/291 (39%), Gaps = 53/291 (18%)
Query: 42 PLDLIHEATR-----NFSNENKLGEGGFGPVYKGVLN--DDKEIAVKRLSRSSGQGLQEF 94
P +HE + N S + +G G FG V G L KEI+V + G ++
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 95 KN------LIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNR 148
++ ++ + H N++R + EYM N SLD L Q +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQ 148
Query: 149 RMCIINGIARDHK----------------------MNPKISDFGMARVFGGNQSEANTNR 186
+ ++ GIA K + K+SDFG++RV + A T R
Sbjct: 149 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 187 VVGT-YGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKL 245
+ +PE F+ SDV+S+G++L E++S R Y Q ++ K
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVI----KA 262
Query: 246 WCEGNAQELMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSVVFML 296
EG + P + L +L+ L C Q+D +RP +V +L
Sbjct: 263 VDEGYR---LPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 31/196 (15%)
Query: 58 KLGEGGFGPV----YKGVLNDDKEI-AVKRLSRSSGQGLQEFK---NLIAKLQHKNLVRX 109
+LG+G FG V Y + ++ E+ AVK+L S+ + L++F+ ++ LQH N+V+
Sbjct: 22 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 110 XXXXXXX--XXXXXICEYMPNKSL-DFLLFDSTRSVQ---LDWNRRMC------------ 151
I EY+P SL D+L R L + ++C
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 141
Query: 152 ----IINGIARDHKMNPKISDFGMARVFGGNQSEANTNRV-VGTYGYMAPEYALEGLFSV 206
I +++ KI DFG+ +V ++ + APE E FSV
Sbjct: 142 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 201
Query: 207 KSDVFSFGVLLLEIIS 222
SDV+SFGV+L E+ +
Sbjct: 202 ASDVWSFGVVLYELFT 217
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 115/291 (39%), Gaps = 53/291 (18%)
Query: 42 PLDLIHEATR-----NFSNENKLGEGGFGPVYKGVLN--DDKEIAVKRLSRSSGQGLQEF 94
P +HE + N S + +G G FG V G L KEI+V + G ++
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 95 KN------LIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNR 148
++ ++ + H N++R + EYM N SLD L Q +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQ 148
Query: 149 RMCIINGIARDHK----------------------MNPKISDFGMARVFGGNQSEANTNR 186
+ ++ GIA K + K+SDFG++RV + A T R
Sbjct: 149 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 187 VVGT-YGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKL 245
+ +PE F+ SDV+S+G++L E++S R Y Q ++ K
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVI----KA 262
Query: 246 WCEGNAQELMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSVVFML 296
EG + P + L +L+ L C Q+D +RP +V +L
Sbjct: 263 VDEGYR---LPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 49/212 (23%)
Query: 58 KLGEGGFGPVYKGVL------NDDKEIAVKRL-SRSSGQGLQEFKN---LIAKLQHKNLV 107
+LGE FG VYKG L + +A+K L ++ G +EF++ L A+LQH N+V
Sbjct: 33 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 92
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL-DFLLF----------DSTRSVQ------------- 143
I Y + L +FL+ D R+V+
Sbjct: 93 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 152
Query: 144 -----LDW-------NRRMCIINGIARDHKMNPKISDFGMAR-VFGGNQSEANTNRVVGT 190
+++ ++ + N + D K+N KISD G+ R V+ + + N ++
Sbjct: 153 QIAAGMEYLSSHHVVHKDLATRNVLVYD-KLNVKISDLGLFREVYAADYYKLLGNSLLPI 211
Query: 191 YGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+MAPE + G FS+ SD++S+GV+L E+ S
Sbjct: 212 -RWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 86/218 (39%), Gaps = 39/218 (17%)
Query: 44 DLIHEATRNFSNENKLGEGGFGPVYKGVL----NDDK--EIAVKRLSRS-SGQGLQEF-- 94
DL +N + LG G FG VY+G + ND ++AVK L S Q +F
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLM 97
Query: 95 -KNLIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCII 153
+I+K H+N+VR + E M L L ++ + M +
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 154 NGIARD-----------HKMN------------------PKISDFGMARVFGGNQSEANT 184
+ARD H ++ KI DFGMAR
Sbjct: 158 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 217
Query: 185 NRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+ +M PE +EG+F+ K+D +SFGVLL EI S
Sbjct: 218 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 115/291 (39%), Gaps = 53/291 (18%)
Query: 42 PLDLIHEATR-----NFSNENKLGEGGFGPVYKGVLN--DDKEIAVKRLSRSSGQGLQEF 94
P +HE + N S + +G G FG V G L KEI+V + G ++
Sbjct: 29 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 88
Query: 95 KN------LIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNR 148
++ ++ + H N++R + EYM N SLD L Q +
Sbjct: 89 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQ 146
Query: 149 RMCIINGIARDHK----------------------MNPKISDFGMARVFGGNQSEANTNR 186
+ ++ GIA K + K+SDFG++RV + A T R
Sbjct: 147 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 206
Query: 187 VVGT-YGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKL 245
+ +PE F+ SDV+S+G++L E++S R Y Q ++ K
Sbjct: 207 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVI----KA 260
Query: 246 WCEGNAQELMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSVVFML 296
EG + P + L +L+ L C Q+D +RP +V +L
Sbjct: 261 VDEGYR---LPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 302
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 115/291 (39%), Gaps = 53/291 (18%)
Query: 42 PLDLIHEATR-----NFSNENKLGEGGFGPVYKGVLN--DDKEIAVKRLSRSSGQGLQEF 94
P +HE + N S + +G G FG V G L KEI+V + G ++
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 95 KN------LIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNR 148
++ ++ + H N++R + EYM N SLD L Q +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQ 148
Query: 149 RMCIINGIARDHK----------------------MNPKISDFGMARVFGGNQSEANTNR 186
+ ++ GIA K + K+SDFG++RV + A T R
Sbjct: 149 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 187 VVGT-YGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKL 245
+ +PE F+ SDV+S+G++L E++S R Y Q ++ K
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVI----KA 262
Query: 246 WCEGNAQELMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSVVFML 296
EG + P + L +L+ L C Q+D +RP +V +L
Sbjct: 263 VDEGYR---LPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 115/291 (39%), Gaps = 53/291 (18%)
Query: 42 PLDLIHEATR-----NFSNENKLGEGGFGPVYKGVLN--DDKEIAVKRLSRSSGQGLQEF 94
P +HE + N S + +G G FG V G L KEI+V + G ++
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 95 KN------LIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNR 148
++ ++ + H N++R + EYM N SLD L Q +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQ 148
Query: 149 RMCIINGIARDHK----------------------MNPKISDFGMARVFGGNQSEANTNR 186
+ ++ GIA K + K+SDFG++RV + A T R
Sbjct: 149 LVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 187 VVGT-YGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKL 245
+ +PE F+ SDV+S+G++L E++S R Y Q ++ K
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVI----KA 262
Query: 246 WCEGNAQELMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSVVFML 296
EG + P + L +L+ L C Q+D +RP +V +L
Sbjct: 263 VDEGYR---LPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 33/196 (16%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSSGQGLQEFKN---LIAKLQHKN--LVRXXXX 112
++G G FG VYKG + D + + ++ + Q LQ FKN ++ K +H N L
Sbjct: 15 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 74
Query: 113 XXXXXXXXXICE--------YMPNKSLDFL-LFDSTRSVQ--LDWNRRMCII------NG 155
CE ++ + + L D R +D+ II N
Sbjct: 75 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNN 134
Query: 156 IARDHKMNPKISDFGMA----RVFGGNQSEANTNRVVGTYGYMAPEYAL---EGLFSVKS 208
I + KI DFG+A R G +Q E ++ G+ +MAPE + +S +S
Sbjct: 135 IFLHEDLTVKIGDFGLATEKSRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 209 DVFSFGVLLLEIISGR 224
DV++FG++L E+++G+
Sbjct: 191 DVYAFGIVLYELMTGQ 206
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 31/196 (15%)
Query: 58 KLGEGGFGPV----YKGVLNDDKEI-AVKRLSRSSGQGLQEFK---NLIAKLQHKNLVRX 109
+LG+G FG V Y + ++ E+ AVK+L S+ + L++F+ ++ LQH N+V+
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 110 XXXXXXX--XXXXXICEYMPNKSL-DFLLFDSTRSVQ---LDWNRRMC------------ 151
I EY+P SL D+L R L + ++C
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 154
Query: 152 ----IINGIARDHKMNPKISDFGMARVFGGNQSEANTNRV-VGTYGYMAPEYALEGLFSV 206
I +++ KI DFG+ +V ++ + APE E FSV
Sbjct: 155 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 214
Query: 207 KSDVFSFGVLLLEIIS 222
SDV+SFGV+L E+ +
Sbjct: 215 ASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 31/196 (15%)
Query: 58 KLGEGGFGPV----YKGVLNDDKEI-AVKRLSRSSGQGLQEFK---NLIAKLQHKNLVRX 109
+LG+G FG V Y + ++ E+ AVK+L S+ + L++F+ ++ LQH N+V+
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 110 XXX--XXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQ---LDWNRRMC------------ 151
I EY+P SL D+L R L + ++C
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 154
Query: 152 ----IINGIARDHKMNPKISDFGMARVFGGNQSEANTNRV-VGTYGYMAPEYALEGLFSV 206
I +++ KI DFG+ +V ++ + APE E FSV
Sbjct: 155 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 214
Query: 207 KSDVFSFGVLLLEIIS 222
SDV+SFGV+L E+ +
Sbjct: 215 ASDVWSFGVVLYELFT 230
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 49/212 (23%)
Query: 58 KLGEGGFGPVYKGVL------NDDKEIAVKRL-SRSSGQGLQEFKN---LIAKLQHKNLV 107
+LGE FG VYKG L + +A+K L ++ G +EF++ L A+LQH N+V
Sbjct: 16 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 75
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL-DFLLF----------DSTRSVQ------------- 143
I Y + L +FL+ D R+V+
Sbjct: 76 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 135
Query: 144 -----LDW-------NRRMCIINGIARDHKMNPKISDFGMAR-VFGGNQSEANTNRVVGT 190
+++ ++ + N + D K+N KISD G+ R V+ + + N ++
Sbjct: 136 QIAAGMEYLSSHHVVHKDLATRNVLVYD-KLNVKISDLGLFREVYAADYYKLLGNSLLPI 194
Query: 191 YGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+MAPE + G FS+ SD++S+GV+L E+ S
Sbjct: 195 -RWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 85/233 (36%), Gaps = 53/233 (22%)
Query: 47 HEATRNFSNENKLGEGGFGPVYKGVLN------DDKEIAVKRLSRSSGQGLQEFK---NL 97
H R+ + +LGEG FG V+ + D +AVK L +S Q+F+ L
Sbjct: 37 HIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAEL 96
Query: 98 IAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLL---------------------- 135
+ LQH+++VR + EYM + L+ L
Sbjct: 97 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 156
Query: 136 -----------------FDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGN 178
V D R C++ + KI DFGM+R
Sbjct: 157 LGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG-----QGLVVKIGDFGMSRDIYST 211
Query: 179 QSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYL 231
R + +M PE L F+ +SDV+SFGV+L EI + K + L
Sbjct: 212 DYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL 264
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 114/291 (39%), Gaps = 53/291 (18%)
Query: 42 PLDLIHEATR-----NFSNENKLGEGGFGPVYKGVLN--DDKEIAVKRLSRSSGQGLQEF 94
P +HE + N S + +G G FG V G L KEI+V + G ++
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 95 KN------LIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNR 148
++ ++ + H N++R + EYM N SLD L Q +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQ 148
Query: 149 RMCIINGIARDHK----------------------MNPKISDFGMARVFGGNQSEANTNR 186
+ ++ GIA K + K+SDFG+ RV + A T R
Sbjct: 149 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTR 208
Query: 187 VVGT-YGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKL 245
+ +PE F+ SDV+S+G++L E++S R Y Q ++ K
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVI----KA 262
Query: 246 WCEGNAQELMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSVVFML 296
EG + P + L +L+ L C Q+D +RP +V +L
Sbjct: 263 VDEGYR---LPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 33/196 (16%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSSGQGLQEFKN---LIAKLQHKN--LVRXXXX 112
++G G FG VYKG + D + + ++ + Q LQ FKN ++ K +H N L
Sbjct: 35 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 94
Query: 113 XXXXXXXXXICE--------YMPNKSLDFL-LFDSTRSVQ--LDWNRRMCII------NG 155
CE ++ + + L D R +D+ II N
Sbjct: 95 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNN 154
Query: 156 IARDHKMNPKISDFGMA----RVFGGNQSEANTNRVVGTYGYMAPEYAL---EGLFSVKS 208
I + KI DFG+A R G +Q E ++ G+ +MAPE + +S +S
Sbjct: 155 IFLHEDLTVKIGDFGLATEKSRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSFQS 210
Query: 209 DVFSFGVLLLEIISGR 224
DV++FG++L E+++G+
Sbjct: 211 DVYAFGIVLYELMTGQ 226
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 114/299 (38%), Gaps = 63/299 (21%)
Query: 41 FPLDLIHEATRNFSNE---------NKLGEGGFGPVYKGVLN--DDKEIAVKRLSRSSGQ 89
F + ++A R F+ E +G G FG V G L +EI V + +G
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 90 GLQEFKN------LIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLL-------- 135
++ ++ ++ + H N++ I EYM N SLD L
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT 129
Query: 136 -----------------FDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGN 178
+V D R ++N + K+SDFGM+RV +
Sbjct: 130 VIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNS-----NLVCKVSDFGMSRVLEDD 184
Query: 179 QSEANTNRVVGT-YGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQS 237
A T R + APE F+ SDV+S+G+++ E++S R Y Q
Sbjct: 185 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS--YGERPYWDMSNQD 242
Query: 238 LLTYTWKLWCEGNAQELMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSVVFML 296
++ K EG + P + L +L+ L C Q++ +DRP +V ML
Sbjct: 243 VI----KAIEEGYR---LPPPMDCPIALHQLM------LDCWQKERSDRPKFGQIVNML 288
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 31/196 (15%)
Query: 58 KLGEGGFGPV----YKGVLNDDKEI-AVKRLSRSSGQGLQEFK---NLIAKLQHKNLVRX 109
+LG+G FG V Y + ++ E+ AVK+L S+ + L++F+ ++ LQH N+V+
Sbjct: 18 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 110 XXXXXXX--XXXXXICEYMPNKSL-DFLLFDSTRSVQ---LDWNRRMC------------ 151
I EY+P SL D+L R L + ++C
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 137
Query: 152 ----IINGIARDHKMNPKISDFGMARVFGGNQSEANTNRV-VGTYGYMAPEYALEGLFSV 206
I +++ KI DFG+ +V ++ + APE E FSV
Sbjct: 138 HRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSV 197
Query: 207 KSDVFSFGVLLLEIIS 222
SDV+SFGV+L E+ +
Sbjct: 198 ASDVWSFGVVLYELFT 213
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 27/193 (13%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSSGQGLQEFKN---LIAKLQHKNLVRXXXXXX 114
++G G FG VYKG + D + + ++ + Q LQ FKN ++ K +H N++
Sbjct: 19 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYS 77
Query: 115 XXXXXXXICEYMPNKSLDFLLFDSTRSVQL--------DWNRRMCIING---IARDHKMN 163
+ ++ SL L S ++ R M ++ I RD K N
Sbjct: 78 TKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSN 137
Query: 164 P---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYAL---EGLFSVKSDVF 211
KI DFG+A V ++ G+ +MAPE +S +SDV+
Sbjct: 138 NIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVY 197
Query: 212 SFGVLLLEIISGR 224
+FG++L E+++G+
Sbjct: 198 AFGIVLYELMTGQ 210
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 33/196 (16%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSSGQGLQEFKN---LIAKLQHKN--LVRXXXX 112
++G G FG VYKG + D + + ++ + Q LQ FKN ++ K +H N L
Sbjct: 43 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 102
Query: 113 XXXXXXXXXICE--------YMPNKSLDFL-LFDSTRSVQ--LDWNRRMCII------NG 155
CE ++ + + L D R +D+ II N
Sbjct: 103 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNN 162
Query: 156 IARDHKMNPKISDFGMA----RVFGGNQSEANTNRVVGTYGYMAPEYAL---EGLFSVKS 208
I + KI DFG+A R G +Q E ++ G+ +MAPE + +S +S
Sbjct: 163 IFLHEDLTVKIGDFGLATEKSRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSFQS 218
Query: 209 DVFSFGVLLLEIISGR 224
DV++FG++L E+++G+
Sbjct: 219 DVYAFGIVLYELMTGQ 234
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 85/196 (43%), Gaps = 31/196 (15%)
Query: 57 NKLGEGGFGPVY---KGVLNDDKEIAVKRL---SRSSGQGLQEFKNLI---AKLQHKNLV 107
+KLG GG VY +LN ++A+K + R + L+ F+ + ++L H+N+V
Sbjct: 17 DKLGGGGMSTVYLAEDTILN--IKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIV 74
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRRMCIINGIARDHKM---- 162
+ EY+ +L +++ SV N I++GI H M
Sbjct: 75 SMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVH 134
Query: 163 ---NP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKS 208
P KI DFG+A+ S TN V+GT Y +PE A +
Sbjct: 135 RDIKPQNILIDSNKTLKIFDFGIAKALS-ETSLTQTNHVLGTVQYFSPEQAKGEATDECT 193
Query: 209 DVFSFGVLLLEIISGR 224
D++S G++L E++ G
Sbjct: 194 DIYSIGIVLYEMLVGE 209
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 86/218 (39%), Gaps = 39/218 (17%)
Query: 44 DLIHEATRNFSNENKLGEGGFGPVYKGVL----NDDK--EIAVKRLSR-SSGQGLQEF-- 94
DL +N + LG G FG VY+G + ND ++AVK L S Q +F
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 95 -KNLIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCII 153
+I+K H+N+VR + E M L L ++ + M +
Sbjct: 84 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 143
Query: 154 NGIARD-----------HKMN------------------PKISDFGMARVFGGNQSEANT 184
+ARD H ++ KI DFGMA+
Sbjct: 144 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKG 203
Query: 185 NRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+ +M PE +EG+F+ K+D +SFGVLL EI S
Sbjct: 204 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 109/295 (36%), Gaps = 62/295 (21%)
Query: 42 PLDLIHEATRNFSNENKLGEGGFGPVYKGVLNDDKEIAV-KRLSRSSGQGLQEF---KNL 97
P DLIH LG+G FG K + E+ V K L R + + F +
Sbjct: 9 PSDLIHGEV--------LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKV 60
Query: 98 IAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC----II 153
+ L+H N+++ I EY+ +L ++ + Q W++R+ I
Sbjct: 61 MRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGII--KSMDSQYPWSQRVSFAKDIA 118
Query: 154 NGIARDHKMN------------------PKISDFGMARVFGGNQSEANTNR--------- 186
+G+A H MN ++DFG+AR+ +++ R
Sbjct: 119 SGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKK 178
Query: 187 ---VVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTW 243
VVG +MAPE + K DVFSFG++L EII YL T +
Sbjct: 179 RYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPR------TMDF 232
Query: 244 KLWCEGNAQELMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSVVFMLAT 298
L G P SF I + C DP RP+ + L T
Sbjct: 233 GLNVRGFLDRYCPPNCPPSF--------FPITVRCCDLDPEKRPSFVKLEHWLET 279
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 39/200 (19%)
Query: 58 KLGEGGFGPV----YKGVLNDDKEI-AVKRLSRSSGQGLQEFK---NLIAKLQHKNLVRX 109
+LG+G FG V Y + ++ E+ AVK+L S+ + L++F+ ++ LQH N+V+
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 110 XXXXXXX--XXXXXICEYMPNKSL-DFLLFDSTRSVQ---LDWNRRMC------------ 151
I EY+P SL D+L R L + ++C
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 136
Query: 152 ----IINGIARDHKMNPKISDFGMARVFGGNQS-----EANTNRVVGTYGYMAPEYALEG 202
I +++ KI DFG+ +V ++ E + + + APE E
Sbjct: 137 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIF----WYAPESLTES 192
Query: 203 LFSVKSDVFSFGVLLLEIIS 222
FSV SDV+SFGV+L E+ +
Sbjct: 193 KFSVASDVWSFGVVLYELFT 212
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 125 YMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANT 184
Y K ++FL F S V D R ++ H KI DFG+AR + +
Sbjct: 179 YQVAKGMEFLEFKSC--VHRDLAARNVLVT-----HGKVVKICDFGLARDIMSDSNYVVR 231
Query: 185 NRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+MAPE EG++++KSDV+S+G+LL EI S
Sbjct: 232 GNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 112/260 (43%), Gaps = 40/260 (15%)
Query: 53 FSNENKLGEGGFGPVY--KGVLNDDKEIAVKRLSRSSGQGLQEFKNLIA------KLQHK 104
FS+ ++G G FG VY + V N + +A+K++S S Q ++++++I KL+H
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEV-VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHP 75
Query: 105 NLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDST--RSVQLDWNRRMCI--------IN 154
N ++ + EY + D L + V++ + N
Sbjct: 76 NTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN 135
Query: 155 GIARDHKM-NPKISDFGMARV--FGGNQSEANTNRVVGTYGYMAPEYAL---EGLFSVKS 208
I RD K N +S+ G+ ++ FG A N VGT +MAPE L EG + K
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKV 195
Query: 209 DVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFILEEL 268
DV+S G+ +E ++ RK F + S L + AQ P L+ E
Sbjct: 196 DVWSLGITCIE-LAERKPPLFNM--NAMSALYHI--------AQN-ESPALQSGHWSEYF 243
Query: 269 LKRIHIGLLCVQEDPADRPT 288
+ C+Q+ P DRPT
Sbjct: 244 RNFVDS---CLQKIPQDRPT 260
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 59 LGEGGFGPVYKGVLNDDKEIAVKRLSR-SSGQGLQEFKNLIAKLQHKNLVRXXXXXXXXX 117
+G+G FG V G +K +AVK + ++ Q +++ +L+H NLV+
Sbjct: 20 IGKGEFGDVMLGDYRGNK-VAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK 78
Query: 118 XXXXIC-EYMPNKSLDFLLFDSTRSV---------QLDWNRRMCIING---IARDHKMN- 163
I EYM SL L RSV LD M + G + RD
Sbjct: 79 GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARN 138
Query: 164 --------PKISDFGMARVFGGNQSEANTNRVVGT--YGYMAPEYALEGLFSVKSDVFSF 213
K+SDFG+ + EA++ + G + APE E FS KSDV+SF
Sbjct: 139 VLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSF 191
Query: 214 GVLLLEIIS 222
G+LL EI S
Sbjct: 192 GILLWEIYS 200
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 112/260 (43%), Gaps = 40/260 (15%)
Query: 53 FSNENKLGEGGFGPVY--KGVLNDDKEIAVKRLSRSSGQGLQEFKNLIA------KLQHK 104
FS+ ++G G FG VY + V N + +A+K++S S Q ++++++I KL+H
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEV-VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHP 114
Query: 105 NLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDST--RSVQLDWNRRMCI--------IN 154
N ++ + EY + D L + V++ + N
Sbjct: 115 NTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN 174
Query: 155 GIARDHKM-NPKISDFGMARV--FGGNQSEANTNRVVGTYGYMAPEYAL---EGLFSVKS 208
I RD K N +S+ G+ ++ FG A N VGT +MAPE L EG + K
Sbjct: 175 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKV 234
Query: 209 DVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFILEEL 268
DV+S G+ +E ++ RK F + S L + AQ P L+ E
Sbjct: 235 DVWSLGITCIE-LAERKPPLFNM--NAMSALYHI--------AQN-ESPALQSGHWSEYF 282
Query: 269 LKRIHIGLLCVQEDPADRPT 288
+ C+Q+ P DRPT
Sbjct: 283 RNFVDS---CLQKIPQDRPT 299
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 115/288 (39%), Gaps = 53/288 (18%)
Query: 47 HEATRNFSNE---------NKLGEGGFGPVYKGVLN--DDKEIAVKRLSRSSGQGLQEFK 95
++A R F+ E +G G FG V G L +EI V + +G ++ +
Sbjct: 1 NQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRR 60
Query: 96 N------LIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLD-FLLFDSTR--SVQL-- 144
+ ++ + H N++ I EYM N SLD FL + R +QL
Sbjct: 61 DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVG 120
Query: 145 ---------------DWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVG 189
+ R I + + K+SDFGM+RV + A T R
Sbjct: 121 MLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK 180
Query: 190 T-YGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCE 248
+ APE F+ SDV+S+G+++ E++S R Y Q ++ K E
Sbjct: 181 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS--YGERPYWDMSNQDVI----KAIEE 234
Query: 249 GNAQELMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSVVFML 296
G + P + L +L+ L C Q++ +DRP +V ML
Sbjct: 235 GYR---LPPPMDCPIALHQLM------LDCWQKERSDRPKFGQIVNML 273
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 35/197 (17%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSSGQGLQEFKN---LIAKLQHKNLVRXXXXXX 114
++G G FG VYKG + D + + ++ + Q LQ FKN ++ K +H N++
Sbjct: 31 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYS 89
Query: 115 XXXXXXXICEYMPNKSLDFLLFDSTRSVQL--------DWNRRMCIING---IARDHKMN 163
+ ++ SL L S ++ R M ++ I RD K N
Sbjct: 90 TAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSN 149
Query: 164 P---------KISDFGMA----RVFGGNQSEANTNRVVGTYGYMAPEYAL---EGLFSVK 207
KI DFG+A R G +Q E ++ G+ +MAPE +S +
Sbjct: 150 NIFLHEDNTVKIGDFGLATEKSRWSGSHQFE----QLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 208 SDVFSFGVLLLEIISGR 224
SDV++FG++L E+++G+
Sbjct: 206 SDVYAFGIVLYELMTGQ 222
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 107/270 (39%), Gaps = 44/270 (16%)
Query: 56 ENKLGEGGFGPVYKGVLN--DDKEIAVKRLSRSSGQGLQEFKN------LIAKLQHKNLV 107
E +G G FG V G L +EI V + +G ++ ++ ++ + H N++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 108 RXXXXXXXXXXXXXICEYMPNKSLDFLL------FDSTRSV--------------QLDWN 147
I EYM N SLD L F + V + +
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYV 132
Query: 148 RRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGT-YGYMAPEYALEGLFSV 206
R I + + K+SDFGM+RV + A T R + APE F+
Sbjct: 133 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTS 192
Query: 207 KSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFILE 266
SDV+S+G+++ E++S R Y Q ++ K EG + P + L
Sbjct: 193 ASDVWSYGIVMWEVMS--YGERPYWDMSNQDVI----KAIEEGYR---LPPPMDCPIALH 243
Query: 267 ELLKRIHIGLLCVQEDPADRPTMSSVVFML 296
+L+ L C Q++ +DRP +V ML
Sbjct: 244 QLM------LDCWQKERSDRPKFGQIVNML 267
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 114/287 (39%), Gaps = 53/287 (18%)
Query: 46 IHEATR-----NFSNENKLGEGGFGPVYKGVLN--DDKEIAVKRLSRSSGQGLQEFKN-- 96
+HE + N S + +G G FG V G L KEI+V + G ++ ++
Sbjct: 23 VHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL 82
Query: 97 ----LIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCI 152
++ + H N++R + EYM N SLD L Q + + +
Sbjct: 83 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGM 140
Query: 153 INGIARDHK----------------------MNPKISDFGMARVFGGNQSEANTNRVVGT 190
+ GIA K + K+SDFG++RV + A T R
Sbjct: 141 LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 200
Query: 191 -YGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCEG 249
+ +PE F+ SDV+S+G++L E++S R Y Q ++ K EG
Sbjct: 201 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVI----KAVDEG 254
Query: 250 NAQELMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSVVFML 296
+ P + L +L+ L C Q+D +RP +V +L
Sbjct: 255 YR---LPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 292
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 35/197 (17%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSSGQGLQEFKN---LIAKLQHKNLVRXXXXXX 114
++G G FG VYKG + D + + ++ + Q LQ FKN ++ K +H N++
Sbjct: 31 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYS 89
Query: 115 XXXXXXXICEYMPNKSLDFLLFDSTRSVQL--------DWNRRMCIING---IARDHKMN 163
+ ++ SL L S ++ R M ++ I RD K N
Sbjct: 90 TKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSN 149
Query: 164 P---------KISDFGMA----RVFGGNQSEANTNRVVGTYGYMAPEYAL---EGLFSVK 207
KI DFG+A R G +Q E ++ G+ +MAPE +S +
Sbjct: 150 NIFLHEDNTVKIGDFGLATEKSRWSGSHQFE----QLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 208 SDVFSFGVLLLEIISGR 224
SDV++FG++L E+++G+
Sbjct: 206 SDVYAFGIVLYELMTGQ 222
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 31/196 (15%)
Query: 58 KLGEGGFGPV----YKGVLNDDKEI-AVKRLSRSSGQGLQEFK---NLIAKLQHKNLVRX 109
+LG+G FG V Y + ++ E+ AVK+L S+ + L++F+ ++ LQH N+V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 110 XXXXXXX--XXXXXICEYMPNKSLDFLLFDSTRSVQ----LDWNRRMC------------ 151
I E++P SL L + L + ++C
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 139
Query: 152 ----IINGIARDHKMNPKISDFGMARVFGGNQSEANTNRV-VGTYGYMAPEYALEGLFSV 206
I +++ KI DFG+ +V ++ + APE E FSV
Sbjct: 140 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 199
Query: 207 KSDVFSFGVLLLEIIS 222
SDV+SFGV+L E+ +
Sbjct: 200 ASDVWSFGVVLYELFT 215
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 114/287 (39%), Gaps = 53/287 (18%)
Query: 46 IHEATR-----NFSNENKLGEGGFGPVYKGVLN--DDKEIAVKRLSRSSGQGLQEFKN-- 96
+HE + N S + +G G FG V G L KEI+V + G ++ ++
Sbjct: 6 VHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL 65
Query: 97 ----LIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCI 152
++ + H N++R + EYM N SLD L Q + + +
Sbjct: 66 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGM 123
Query: 153 INGIARDHK----------------------MNPKISDFGMARVFGGNQSEANTNRVVGT 190
+ GIA K + K+SDFG++RV + A T R
Sbjct: 124 LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 183
Query: 191 -YGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCEG 249
+ +PE F+ SDV+S+G++L E++S R Y Q ++ K EG
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVI----KAVDEG 237
Query: 250 NAQELMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSVVFML 296
+ P + L +L+ L C Q+D +RP +V +L
Sbjct: 238 YR---LPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 275
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 59 LGEGGFGPVYKGVLNDDKEIAVKRLSR-SSGQGLQEFKNLIAKLQHKNLVRXXXXXXXXX 117
+G+G FG V G +K +AVK + ++ Q +++ +L+H NLV+
Sbjct: 201 IGKGEFGDVMLGDYRGNK-VAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK 259
Query: 118 XXXXIC-EYMPNKSLDFLLFDSTRSV---------QLDWNRRMCIING---IARDHKMN- 163
I EYM SL L RSV LD M + G + RD
Sbjct: 260 GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARN 319
Query: 164 --------PKISDFGMARVFGGNQSEANTNRVVGT--YGYMAPEYALEGLFSVKSDVFSF 213
K+SDFG+ + EA++ + G + APE E FS KSDV+SF
Sbjct: 320 VLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSF 372
Query: 214 GVLLLEIIS 222
G+LL EI S
Sbjct: 373 GILLWEIYS 381
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 59 LGEGGFGPVYKGVLNDDKEIAVKRLSR-SSGQGLQEFKNLIAKLQHKNLVRXXXXXXXXX 117
+G+G FG V G +K +AVK + ++ Q +++ +L+H NLV+
Sbjct: 29 IGKGEFGDVMLGDYRGNK-VAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK 87
Query: 118 XXXXIC-EYMPNKSLDFLLFDSTRSV---------QLDWNRRMCIING---IARDHKMN- 163
I EYM SL L RSV LD M + G + RD
Sbjct: 88 GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARN 147
Query: 164 --------PKISDFGMARVFGGNQSEANTNRVVGT--YGYMAPEYALEGLFSVKSDVFSF 213
K+SDFG+ + EA++ + G + APE E FS KSDV+SF
Sbjct: 148 VLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSF 200
Query: 214 GVLLLEIIS 222
G+LL EI S
Sbjct: 201 GILLWEIYS 209
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 59 LGEGGFGPVYKGVLNDDKEIAVKRLSR-SSGQGLQEFKNLIAKLQHKNLVRXXXXXXXXX 117
+G+G FG V G +K +AVK + ++ Q +++ +L+H NLV+
Sbjct: 14 IGKGEFGDVMLGDYRGNK-VAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK 72
Query: 118 XXXXIC-EYMPNKSLDFLLFDSTRSV---------QLDWNRRMCIING---IARDHKMN- 163
I EYM SL L RSV LD M + G + RD
Sbjct: 73 GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARN 132
Query: 164 --------PKISDFGMARVFGGNQSEANTNRVVGT--YGYMAPEYALEGLFSVKSDVFSF 213
K+SDFG+ + EA++ + G + APE E FS KSDV+SF
Sbjct: 133 VLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSF 185
Query: 214 GVLLLEIIS 222
G+LL EI S
Sbjct: 186 GILLWEIYS 194
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 116/279 (41%), Gaps = 49/279 (17%)
Query: 44 DLIHEATRNFSNENKLGEGGFGPVYKGVLNDD------KEIAVKRLSRSSGQGLQEFKNL 97
+L ++ + K+GEG FG +D KEI + R+S + + +
Sbjct: 17 NLYFQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAV 76
Query: 98 IAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ------LDWNRRMC 151
+A ++H N+V+ + +Y L F ++ + V LDW ++C
Sbjct: 77 LANMKHPNIVQYRESFEENGSLYIVMDYCEGGDL-FKRINAQKGVLFQEDQILDWFVQIC 135
Query: 152 IINGIARDHKM----------------NPKISDFGMARVFGGNQSEANTNRVVGTYGYMA 195
+ D K+ ++ DFG+ARV N + +GT Y++
Sbjct: 136 LALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL--NSTVELARACIGTPYYLS 193
Query: 196 PEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCEGNAQELM 255
PE ++ KSD+++ G +L E+ + + + +E G S+ K+
Sbjct: 194 PEICENKPYNNKSDIWALGCVLYELCTLK-----HAFEAG-SMKNLVLKIISGS-----F 242
Query: 256 DPV-LKESFILEELLKRIHIGLLCVQEDPADRPTMSSVV 293
PV L S+ L L+ ++ + +P DRP+++S++
Sbjct: 243 PPVSLHYSYDLRSLVSQL------FKRNPRDRPSVNSIL 275
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 114/291 (39%), Gaps = 53/291 (18%)
Query: 42 PLDLIHEATR-----NFSNENKLGEGGFGPVYKGVLN--DDKEIAVKRLSRSSGQGLQEF 94
P +HE + N S + +G G FG V G L KEI+V + G ++
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 95 KN------LIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNR 148
++ ++ + H N++R + E M N SLD L Q +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQFTVIQ 148
Query: 149 RMCIINGIARDHK----------------------MNPKISDFGMARVFGGNQSEANTNR 186
+ ++ GIA K + K+SDFG++RV + A T R
Sbjct: 149 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 187 VVGT-YGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKL 245
+ +PE F+ SDV+S+G++L E++S R Y Q ++ K
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVI----KA 262
Query: 246 WCEGNAQELMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSVVFML 296
EG + P + L +L+ L C Q+D +RP +V +L
Sbjct: 263 VDEGYR---LPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 114/291 (39%), Gaps = 53/291 (18%)
Query: 42 PLDLIHEATR-----NFSNENKLGEGGFGPVYKGVLN--DDKEIAVKRLSRSSGQGLQEF 94
P +HE + N S + +G G FG V G L KEI+V + G ++
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 95 KN------LIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNR 148
++ ++ + H N++R + E M N SLD L Q +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQFTVIQ 148
Query: 149 RMCIINGIARDHK----------------------MNPKISDFGMARVFGGNQSEANTNR 186
+ ++ GIA K + K+SDFG++RV + A T R
Sbjct: 149 LVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 187 VVGT-YGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKL 245
+ +PE F+ SDV+S+G++L E++S R Y Q ++ K
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVI----KA 262
Query: 246 WCEGNAQELMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSVVFML 296
EG + P + L +L+ L C Q+D +RP +V +L
Sbjct: 263 VDEGYR---LPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 76/179 (42%), Gaps = 28/179 (15%)
Query: 136 FDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMA 195
++ + V D R C++ H KI DFGM R + + +MA
Sbjct: 143 LNAKKFVHRDLAARNCMVA-----HDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 197
Query: 196 PEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLT--YTWKLWCEGNAQE 253
PE +G+F+ SD++SFGV+L EI S L EQ L+ K +G +
Sbjct: 198 PESLKDGVFTTSSDMWSFGVVLWEITS--------LAEQPYQGLSNEQVLKFVMDGGYLD 249
Query: 254 LMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSVVFMLATDTITLLQPTQPAFS 312
D + + +L++ +C Q +P RPT +V +L D L P+ P S
Sbjct: 250 QPDNCPER---VTDLMR------MCWQFNPKMRPTFLEIVNLLKDD----LHPSFPEVS 295
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 76/179 (42%), Gaps = 28/179 (15%)
Query: 136 FDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMA 195
++ + V D R C++ H KI DFGM R + + +MA
Sbjct: 146 LNAKKFVHRDLAARNCMVA-----HDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 196 PEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLT--YTWKLWCEGNAQE 253
PE +G+F+ SD++SFGV+L EI S L EQ L+ K +G +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS--------LAEQPYQGLSNEQVLKFVMDGGYLD 252
Query: 254 LMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSVVFMLATDTITLLQPTQPAFS 312
D + + +L++ +C Q +P RPT +V +L D L P+ P S
Sbjct: 253 QPDNCPER---VTDLMR------MCWQFNPKMRPTFLEIVNLLKDD----LHPSFPEVS 298
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 76/179 (42%), Gaps = 28/179 (15%)
Query: 136 FDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMA 195
++ + V D R C++ H KI DFGM R + + +MA
Sbjct: 146 LNAKKFVHRDLAARNCMVA-----HDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 196 PEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLT--YTWKLWCEGNAQE 253
PE +G+F+ SD++SFGV+L EI S L EQ L+ K +G +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS--------LAEQPYQGLSNEQVLKFVMDGGYLD 252
Query: 254 LMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSVVFMLATDTITLLQPTQPAFS 312
D + + +L++ +C Q +P RPT +V +L D L P+ P S
Sbjct: 253 QPDNCPER---VTDLMR------MCWQFNPNMRPTFLEIVNLLKDD----LHPSFPEVS 298
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 114/267 (42%), Gaps = 46/267 (17%)
Query: 57 NKLGEGGFGPVYKGV-LNDDKEIAVK--RLSRSSGQGLQEFKNLIAKLQHKNLVRXXXXX 113
++G G FG V+ G LN DK +A+K R S + E ++ KL H LV+
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 114 XXXXXXXXICEYMPNKSL-DFL-----LF--DSTRSVQLDWNRRM------CIING--IA 157
+ E+M + L D+L LF ++ + LD M C+I+ A
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAA 132
Query: 158 RDHKMNP----KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSF 213
R+ + K+SDFGM R +Q ++T + +PE +S KSDV+SF
Sbjct: 133 RNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSSKSDVWSF 191
Query: 214 GVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFILEELLKRIH 273
GVL+ E+ S K YE + E+++ + + + L H
Sbjct: 192 GVLMWEVFSEGKIP----YENRSN--------------SEVVEDISTGFRLYKPRLASTH 233
Query: 274 IGLL---CVQEDPADRPTMSSVVFMLA 297
+ + C +E P DRP S ++ LA
Sbjct: 234 VYQIMNHCWRERPEDRPAFSRLLRQLA 260
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 39/196 (19%)
Query: 57 NKLGEGGFGPVYKGVLNDDKEIAVKRL---SRSSGQGLQEFKNLIAKLQHKNLVRXXXXX 113
+LG G FG V G ++A+K + S S + ++E K ++ L H+ LV+
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAK-VMMNLSHEKLVQLYGVC 88
Query: 114 XXXXXXXXICEYMPNKSL-DFL------------------------LFDSTRSVQLDWNR 148
I EYM N L ++L +S + + D
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAA 148
Query: 149 RMCIIN--GIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSV 206
R C++N G+ K+SDFG++R ++ ++ + PE + FS
Sbjct: 149 RNCLVNDQGVV-------KVSDFGLSRYVLDDEETSSVGSKFPV-RWSPPEVLMYSKFSS 200
Query: 207 KSDVFSFGVLLLEIIS 222
KSD+++FGVL+ EI S
Sbjct: 201 KSDIWAFGVLMWEIYS 216
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 39/196 (19%)
Query: 57 NKLGEGGFGPVYKGVLNDDKEIAVKRL---SRSSGQGLQEFKNLIAKLQHKNLVRXXXXX 113
+LG G FG V G ++A+K + S S + ++E K ++ L H+ LV+
Sbjct: 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAK-VMMNLSHEKLVQLYGVC 68
Query: 114 XXXXXXXXICEYMPNKSL-DFL------------------------LFDSTRSVQLDWNR 148
I EYM N L ++L +S + + D
Sbjct: 69 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAA 128
Query: 149 RMCIIN--GIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSV 206
R C++N G+ K+SDFG++R ++ ++ + PE + FS
Sbjct: 129 RNCLVNDQGVV-------KVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSKFSS 180
Query: 207 KSDVFSFGVLLLEIIS 222
KSD+++FGVL+ EI S
Sbjct: 181 KSDIWAFGVLMWEIYS 196
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 39/196 (19%)
Query: 57 NKLGEGGFGPVYKGVLNDDKEIAVKRL---SRSSGQGLQEFKNLIAKLQHKNLVRXXXXX 113
+LG G FG V G ++A+K + S S + ++E K ++ L H+ LV+
Sbjct: 14 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAK-VMMNLSHEKLVQLYGVC 72
Query: 114 XXXXXXXXICEYMPNKSL-DFL------------------------LFDSTRSVQLDWNR 148
I EYM N L ++L +S + + D
Sbjct: 73 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAA 132
Query: 149 RMCIIN--GIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSV 206
R C++N G+ K+SDFG++R ++ ++ + PE + FS
Sbjct: 133 RNCLVNDQGVV-------KVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSKFSS 184
Query: 207 KSDVFSFGVLLLEIIS 222
KSD+++FGVL+ EI S
Sbjct: 185 KSDIWAFGVLMWEIYS 200
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 83/195 (42%), Gaps = 39/195 (20%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRL---SRSSGQGLQEFKNLIAKLQHKNLVRXXXXXX 114
+LG G FG V G ++A+K + S S + ++E K ++ L H+ LV+
Sbjct: 16 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAK-VMMNLSHEKLVQLYGVCT 74
Query: 115 XXXXXXXICEYMPNKSL-DFL------------------------LFDSTRSVQLDWNRR 149
I EYM N L ++L +S + + D R
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAAR 134
Query: 150 MCIIN--GIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVK 207
C++N G+ K+SDFG++R ++ ++ + PE + FS K
Sbjct: 135 NCLVNDQGVV-------KVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSKFSSK 186
Query: 208 SDVFSFGVLLLEIIS 222
SD+++FGVL+ EI S
Sbjct: 187 SDIWAFGVLMWEIYS 201
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 38/209 (18%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDK--EIAVKRLSRSSGQG-----LQEFKNLIAKL 101
++ F KLG G + VYKG LN +A+K + S +G ++E +L+ +L
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKG-LNKTTGVYVALKEVKLDSEEGTPSTAIREI-SLMKEL 60
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFL----LFDSTRSVQLDWNR--RMCIING 155
+H+N+VR + E+M N ++ + ++ R ++L+ + + ++ G
Sbjct: 61 KHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQG 120
Query: 156 IARDHK-------MNP-----------KISDFGMARVFGGNQSEANT-NRVVGTYGYMAP 196
+A H+ + P K+ DFG+AR FG NT + V T Y AP
Sbjct: 121 LAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG---IPVNTFSSEVVTLWYRAP 177
Query: 197 EYALEG-LFSVKSDVFSFGVLLLEIISGR 224
+ + +S D++S G +L E+I+G+
Sbjct: 178 DVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 77/193 (39%), Gaps = 31/193 (16%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSS------GQGLQEFKNLIAKLQHKNLVRXXX 111
++G G FG V+ G L D + + R + + LQE + ++ + H N+VR
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEAR-ILKQYSHPNIVRLIG 179
Query: 112 XXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLD-----------------WNRRMCIIN 154
+ E + + DFL F T +L + CI
Sbjct: 180 VCTQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHR 237
Query: 155 GIARDH-----KMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSD 209
+A + K KISDFGM+R A+ + APE G +S +SD
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESD 297
Query: 210 VFSFGVLLLEIIS 222
V+SFG+LL E S
Sbjct: 298 VWSFGILLWETFS 310
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 39/196 (19%)
Query: 57 NKLGEGGFGPVYKGVLNDDKEIAVKRL---SRSSGQGLQEFKNLIAKLQHKNLVRXXXXX 113
+LG G FG V G ++A+K + S S + ++E K ++ L H+ LV+
Sbjct: 21 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAK-VMMNLSHEKLVQLYGVC 79
Query: 114 XXXXXXXXICEYMPNKSL-DFL------------------------LFDSTRSVQLDWNR 148
I EYM N L ++L +S + + D
Sbjct: 80 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAA 139
Query: 149 RMCIIN--GIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSV 206
R C++N G+ K+SDFG++R ++ ++ + PE + FS
Sbjct: 140 RNCLVNDQGVV-------KVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSKFSS 191
Query: 207 KSDVFSFGVLLLEIIS 222
KSD+++FGVL+ EI S
Sbjct: 192 KSDIWAFGVLMWEIYS 207
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 114/267 (42%), Gaps = 46/267 (17%)
Query: 57 NKLGEGGFGPVYKGV-LNDDKEIAVK--RLSRSSGQGLQEFKNLIAKLQHKNLVRXXXXX 113
++G G FG V+ G LN DK +A+K R S + E ++ KL H LV+
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 114 XXXXXXXXICEYMPNKSL-DFL-----LF--DSTRSVQLDWNRRM------CIING--IA 157
+ E+M + L D+L LF ++ + LD M C+I+ A
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAA 129
Query: 158 RDHKMNP----KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSF 213
R+ + K+SDFGM R +Q ++T + +PE +S KSDV+SF
Sbjct: 130 RNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSSKSDVWSF 188
Query: 214 GVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFILEELLKRIH 273
GVL+ E+ S K YE + E+++ + + + L H
Sbjct: 189 GVLMWEVFSEGKIP----YENRSN--------------SEVVEDISTGFRLYKPRLASTH 230
Query: 274 IGLL---CVQEDPADRPTMSSVVFMLA 297
+ + C +E P DRP S ++ LA
Sbjct: 231 VYQIMNHCWKERPEDRPAFSRLLRQLA 257
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 39/196 (19%)
Query: 57 NKLGEGGFGPVYKGVLNDDKEIAVKRL---SRSSGQGLQEFKNLIAKLQHKNLVRXXXXX 113
+LG G FG V G ++A+K + S S + ++E K ++ L H+ LV+
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAK-VMMNLSHEKLVQLYGVC 88
Query: 114 XXXXXXXXICEYMPNKSL-DFL------------------------LFDSTRSVQLDWNR 148
I EYM N L ++L +S + + D
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAA 148
Query: 149 RMCIIN--GIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSV 206
R C++N G+ K+SDFG++R ++ ++ + PE + FS
Sbjct: 149 RNCLVNDQGVV-------KVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSKFSS 200
Query: 207 KSDVFSFGVLLLEIIS 222
KSD+++FGVL+ EI S
Sbjct: 201 KSDIWAFGVLMWEIYS 216
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 114/267 (42%), Gaps = 46/267 (17%)
Query: 57 NKLGEGGFGPVYKGV-LNDDKEIAVK--RLSRSSGQGLQEFKNLIAKLQHKNLVRXXXXX 113
++G G FG V+ G LN DK +A+K R S + E ++ KL H LV+
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 114 XXXXXXXXICEYMPNKSL-DFL-----LF--DSTRSVQLDWNRRM------CIING--IA 157
+ E+M + L D+L LF ++ + LD M C+I+ A
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAA 131
Query: 158 RDHKMNP----KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSF 213
R+ + K+SDFGM R +Q ++T + +PE +S KSDV+SF
Sbjct: 132 RNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSSKSDVWSF 190
Query: 214 GVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFILEELLKRIH 273
GVL+ E+ S K YE + E+++ + + + L H
Sbjct: 191 GVLMWEVFSEGKIP----YENRSN--------------SEVVEDISTGFRLYKPRLASTH 232
Query: 274 IGLL---CVQEDPADRPTMSSVVFMLA 297
+ + C +E P DRP S ++ LA
Sbjct: 233 VYQIMNHCWKERPEDRPAFSRLLRQLA 259
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 76/179 (42%), Gaps = 28/179 (15%)
Query: 136 FDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMA 195
++ + V D R C++ H KI DFGM R + + +MA
Sbjct: 145 LNAKKFVHRDLAARNCMVA-----HDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 199
Query: 196 PEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLT--YTWKLWCEGNAQE 253
PE +G+F+ SD++SFGV+L EI S L EQ L+ K +G +
Sbjct: 200 PESLKDGVFTTSSDMWSFGVVLWEITS--------LAEQPYQGLSNEQVLKFVMDGGYLD 251
Query: 254 LMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSVVFMLATDTITLLQPTQPAFS 312
D + + +L++ +C Q +P RPT +V +L D L P+ P S
Sbjct: 252 QPDNCPER---VTDLMR------MCWQFNPKMRPTFLEIVNLLKDD----LHPSFPEVS 297
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 159 DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLL 218
D K N K+ DFG+AR+ + S A T VGT YM+PE ++ KSD++S G LL
Sbjct: 150 DGKQNVKLGDFGLARILNHDTSFAKT--FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLY 207
Query: 219 EIIS 222
E+ +
Sbjct: 208 ELCA 211
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 114/267 (42%), Gaps = 46/267 (17%)
Query: 57 NKLGEGGFGPVYKGV-LNDDKEIAVK--RLSRSSGQGLQEFKNLIAKLQHKNLVRXXXXX 113
++G G FG V+ G LN DK +A+K R S + E ++ KL H LV+
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 114 XXXXXXXXICEYMPNKSL-DFL-----LF--DSTRSVQLDWNRRM------CIING--IA 157
+ E+M + L D+L LF ++ + LD M C+I+ A
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAA 134
Query: 158 RDHKMNP----KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSF 213
R+ + K+SDFGM R +Q ++T + +PE +S KSDV+SF
Sbjct: 135 RNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSSKSDVWSF 193
Query: 214 GVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFILEELLKRIH 273
GVL+ E+ S K YE + E+++ + + + L H
Sbjct: 194 GVLMWEVFSEGKIP----YENRSN--------------SEVVEDISTGFRLYKPRLASTH 235
Query: 274 IGLL---CVQEDPADRPTMSSVVFMLA 297
+ + C +E P DRP S ++ LA
Sbjct: 236 VYQIMNHCWRERPEDRPAFSRLLRQLA 262
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 83/209 (39%), Gaps = 40/209 (19%)
Query: 48 EATRNFSNENKLGEGGFGPVYKGVL----NDDKEIAVKRL-----SRSSGQGLQEFKNLI 98
EA+R E +G G G V G L D +A+K L R L E +++
Sbjct: 47 EASR-IHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSE-ASIM 104
Query: 99 AKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLL--FDSTRSV-------------- 142
+ H N++R + EYM N SLD L D ++
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGM 164
Query: 143 ----QLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYG-----Y 193
L + R + D + K+SDFG++RV + A T T G +
Sbjct: 165 RYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTT----TGGKIPIRW 220
Query: 194 MAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
APE FS SDV+SFGV++ E+++
Sbjct: 221 TAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 159 DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKS-DVFSFGVLL 217
D + N KISDFG+A VF N E N++ GT Y+APE F + DV+S G++L
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 218 LEIISG 223
+++G
Sbjct: 198 TAMLAG 203
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 159 DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKS-DVFSFGVLL 217
D + N KISDFG+A VF N E N++ GT Y+APE F + DV+S G++L
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 218 LEIISG 223
+++G
Sbjct: 198 TAMLAG 203
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 39/196 (19%)
Query: 57 NKLGEGGFGPVYKGVLNDDKEIAVKRL---SRSSGQGLQEFKNLIAKLQHKNLVRXXXXX 113
+LG G FG V G ++A+K + S S + ++E K ++ L H+ LV+
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAK-VMMNLSHEKLVQLYGVC 73
Query: 114 XXXXXXXXICEYMPNKSL-DFL------------------------LFDSTRSVQLDWNR 148
I EYM N L ++L +S + + D
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAA 133
Query: 149 RMCIIN--GIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSV 206
R C++N G+ K+SDFG++R ++ ++ + PE + FS
Sbjct: 134 RNCLVNDQGVV-------KVSDFGLSRYVLDDEYTSSRGSKFPV-RWSPPEVLMYSKFSS 185
Query: 207 KSDVFSFGVLLLEIIS 222
KSD+++FGVL+ EI S
Sbjct: 186 KSDIWAFGVLMWEIYS 201
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 159 DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKS-DVFSFGVLL 217
D + N KISDFG+A VF N E N++ GT Y+APE F + DV+S G++L
Sbjct: 139 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
Query: 218 LEIISG 223
+++G
Sbjct: 199 TAMLAG 204
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 77/193 (39%), Gaps = 31/193 (16%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSS------GQGLQEFKNLIAKLQHKNLVRXXX 111
++G G FG V+ G L D + + R + + LQE + ++ + H N+VR
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEAR-ILKQYSHPNIVRLIG 179
Query: 112 XXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLD-----------------WNRRMCIIN 154
+ E + + DFL F T +L + CI
Sbjct: 180 VCTQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHR 237
Query: 155 GIARDH-----KMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSD 209
+A + K KISDFGM+R A+ + APE G +S +SD
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESD 297
Query: 210 VFSFGVLLLEIIS 222
V+SFG+LL E S
Sbjct: 298 VWSFGILLWETFS 310
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 159 DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKS-DVFSFGVLL 217
D + N KISDFG+A VF N E N++ GT Y+APE F + DV+S G++L
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 218 LEIISG 223
+++G
Sbjct: 198 TAMLAG 203
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 159 DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKS-DVFSFGVLL 217
D + N KISDFG+A VF N E N++ GT Y+APE F + DV+S G++L
Sbjct: 137 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 196
Query: 218 LEIISG 223
+++G
Sbjct: 197 TAMLAG 202
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 159 DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKS-DVFSFGVLL 217
D + N KISDFG+A VF N E N++ GT Y+APE F + DV+S G++L
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 218 LEIISG 223
+++G
Sbjct: 198 TAMLAG 203
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 159 DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKS-DVFSFGVLL 217
D + N KISDFG+A VF N E N++ GT Y+APE F + DV+S G++L
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 218 LEIISG 223
+++G
Sbjct: 198 TAMLAG 203
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 159 DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKS-DVFSFGVLL 217
D + N KISDFG+A VF N E N++ GT Y+APE F + DV+S G++L
Sbjct: 139 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
Query: 218 LEIISG 223
+++G
Sbjct: 199 TAMLAG 204
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 159 DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKS-DVFSFGVLL 217
D + N KISDFG+A VF N E N++ GT Y+APE F + DV+S G++L
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 218 LEIISG 223
+++G
Sbjct: 198 TAMLAG 203
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 159 DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKS-DVFSFGVLL 217
D + N KISDFG+A VF N E N++ GT Y+APE F + DV+S G++L
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 218 LEIISG 223
+++G
Sbjct: 198 TAMLAG 203
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 159 DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKS-DVFSFGVLL 217
D + N KISDFG+A VF N E N++ GT Y+APE F + DV+S G++L
Sbjct: 139 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
Query: 218 LEIISG 223
+++G
Sbjct: 199 TAMLAG 204
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 76/179 (42%), Gaps = 28/179 (15%)
Query: 136 FDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMA 195
++ + V D R C++ H KI DFGM R + + +MA
Sbjct: 146 LNAKKFVHRDLAARNCMVA-----HDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 196 PEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLT--YTWKLWCEGNAQE 253
PE +G+F+ SD++SFGV+L EI S L EQ L+ K +G +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS--------LAEQPYQGLSNEQVLKFVMDGGYLD 252
Query: 254 LMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSVVFMLATDTITLLQPTQPAFS 312
D + + +L++ +C Q +P RPT +V +L D L P+ P S
Sbjct: 253 QPDNCPER---VTDLMR------MCWQFNPKMRPTFLEIVNLLKDD----LHPSFPEVS 298
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 83/209 (39%), Gaps = 40/209 (19%)
Query: 48 EATRNFSNENKLGEGGFGPVYKGVL----NDDKEIAVKRL-----SRSSGQGLQEFKNLI 98
EA+R E +G G G V G L D +A+K L R L E +++
Sbjct: 47 EASR-IHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSE-ASIM 104
Query: 99 AKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLL--FDSTRSV-------------- 142
+ H N++R + EYM N SLD L D ++
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGM 164
Query: 143 ----QLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYG-----Y 193
L + R + D + K+SDFG++RV + A T T G +
Sbjct: 165 RYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTT----TGGKIPIRW 220
Query: 194 MAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
APE FS SDV+SFGV++ E+++
Sbjct: 221 TAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 159 DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKS-DVFSFGVLL 217
D + N KISDFG+A VF N E N++ GT Y+APE F + DV+S G++L
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 218 LEIISG 223
+++G
Sbjct: 198 TAMLAG 203
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 91/195 (46%), Gaps = 33/195 (16%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSS------GQGLQEFKNLIAKLQHKNLVRXXX 111
K+GEG +G VYK + + +A+KR+ + ++E +L+ +L H N+V
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREI-SLLKELHHPNIVSLID 86
Query: 112 XXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC---IINGIARDHK------- 161
+ E+M K L +L ++ +Q D ++ ++ G+A H+
Sbjct: 87 VIHSERCLTLVFEFM-EKDLKKVLDENKTGLQ-DSQIKIYLYQLLRGVAHCHQHRILHRD 144
Query: 162 MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYAL-EGLFSVKSD 209
+ P K++DFG+AR F G + T+ VV T Y AP+ + +S D
Sbjct: 145 LKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVV-TLWYRAPDVLMGSKKYSTSVD 202
Query: 210 VFSFGVLLLEIISGR 224
++S G + E+I+G+
Sbjct: 203 IWSIGCIFAEMITGK 217
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 159 DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKS-DVFSFGVLL 217
D + N KISDFG+A VF N E N++ GT Y+APE F + DV+S G++L
Sbjct: 139 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
Query: 218 LEIISG 223
+++G
Sbjct: 199 TAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 159 DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKS-DVFSFGVLL 217
D + N KISDFG+A VF N E N++ GT Y+APE F + DV+S G++L
Sbjct: 139 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
Query: 218 LEIISG 223
+++G
Sbjct: 199 TAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 159 DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKS-DVFSFGVLL 217
D + N KISDFG+A VF N E N++ GT Y+APE F + DV+S G++L
Sbjct: 139 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
Query: 218 LEIISG 223
+++G
Sbjct: 199 TAMLAG 204
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 76/179 (42%), Gaps = 28/179 (15%)
Query: 136 FDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMA 195
++ + V D R C++ H KI DFGM R + + +MA
Sbjct: 146 LNAKKFVHRDLAARNCMVA-----HDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMA 200
Query: 196 PEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLT--YTWKLWCEGNAQE 253
PE +G+F+ SD++SFGV+L EI S L EQ L+ K +G +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS--------LAEQPYQGLSNEQVLKFVMDGGYLD 252
Query: 254 LMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSVVFMLATDTITLLQPTQPAFS 312
D + + +L++ +C Q +P RPT +V +L D L P+ P S
Sbjct: 253 QPDNCPER---VTDLMR------MCWQFNPKMRPTFLEIVNLLKDD----LHPSFPEVS 298
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 159 DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKS-DVFSFGVLL 217
D + N KISDFG+A VF N E N++ GT Y+APE F + DV+S G++L
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 218 LEIISG 223
+++G
Sbjct: 198 TAMLAG 203
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 159 DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKS-DVFSFGVLL 217
D + N KISDFG+A VF N E N++ GT Y+APE F + DV+S G++L
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 218 LEIISG 223
+++G
Sbjct: 198 TAMLAG 203
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 91/195 (46%), Gaps = 33/195 (16%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSS------GQGLQEFKNLIAKLQHKNLVRXXX 111
K+GEG +G VYK + + +A+KR+ + ++E +L+ +L H N+V
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREI-SLLKELHHPNIVSLID 86
Query: 112 XXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC---IINGIARDHK------- 161
+ E+M K L +L ++ +Q D ++ ++ G+A H+
Sbjct: 87 VIHSERCLTLVFEFM-EKDLKKVLDENKTGLQ-DSQIKIYLYQLLRGVAHCHQHRILHRD 144
Query: 162 MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYAL-EGLFSVKSD 209
+ P K++DFG+AR F G + T+ VV T Y AP+ + +S D
Sbjct: 145 LKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVV-TLWYRAPDVLMGSKKYSTSVD 202
Query: 210 VFSFGVLLLEIISGR 224
++S G + E+I+G+
Sbjct: 203 IWSIGCIFAEMITGK 217
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 113/287 (39%), Gaps = 53/287 (18%)
Query: 46 IHEATR-----NFSNENKLGEGGFGPVYKGVLN--DDKEIAVKRLSRSSGQGLQEFKN-- 96
+HE + N S + +G G FG V G L KEI+V + G ++ ++
Sbjct: 6 VHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL 65
Query: 97 ----LIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCI 152
++ + H N++R + E M N SLD L Q + + +
Sbjct: 66 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQFTVIQLVGM 123
Query: 153 INGIARDHK----------------------MNPKISDFGMARVFGGNQSEANTNRVVGT 190
+ GIA K + K+SDFG++RV + A T R
Sbjct: 124 LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 183
Query: 191 -YGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCEG 249
+ +PE F+ SDV+S+G++L E++S R Y Q ++ K EG
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVI----KAVDEG 237
Query: 250 NAQELMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSVVFML 296
+ P + L +L+ L C Q+D +RP +V +L
Sbjct: 238 YR---LPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 275
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 82/201 (40%), Gaps = 39/201 (19%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDKEIAVKRL-----SRSSGQGLQEFKNLIAKLQHKNLV 107
F+ +++G+G FG VYKG+ N KE+ ++ + + +Q+ ++++ +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 108 RXXXXXXXXXXXXXICEYMPN-------------------------KSLDFLLFDSTRSV 142
R I EY+ K LD+L S R +
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYL--HSERKI 138
Query: 143 QLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEG 202
D +++ + + K++DFG+A Q N VGT +MAPE +
Sbjct: 139 HRDIKAANVLLS-----EQGDVKLADFGVAGQLTDTQ--IKRNXFVGTPFWMAPEVIKQS 191
Query: 203 LFSVKSDVFSFGVLLLEIISG 223
+ K+D++S G+ +E+ G
Sbjct: 192 AYDFKADIWSLGITAIELAKG 212
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 159 DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKS-DVFSFGVLL 217
D + N KISDFG+A VF N E N++ GT Y+APE F + DV+S G++L
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 218 LEIISG 223
+++G
Sbjct: 198 TAMLAG 203
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 90/235 (38%), Gaps = 56/235 (23%)
Query: 47 HEATRNFSNENKLGEGGFGPVYKGVL------NDDKEIAVKRLSRSSGQGLQEFK---NL 97
H R+ + +LGEG FG V+ D +AVK L + ++F+ L
Sbjct: 11 HIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAEL 70
Query: 98 IAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLD----------FLLFD---------- 137
+ LQH+++V+ + EYM + L+ +L D
Sbjct: 71 LTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGEL 130
Query: 138 --------------------STRSVQLDWNRRMCIINGIARDHKMNPKISDFGMAR-VFG 176
S V D R C++ + KI DFGM+R V+
Sbjct: 131 GLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGA-----NLLVKIGDFGMSRDVYS 185
Query: 177 GNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYL 231
+ + ++ +M PE + F+ +SDV+SFGV+L EI + K F L
Sbjct: 186 TDYYRVGGHTMLPIR-WMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQL 239
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 159 DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKS-DVFSFGVLL 217
D + N KISDFG+A VF N E N++ GT Y+APE F + DV+S G++L
Sbjct: 139 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
Query: 218 LEIISG 223
+++G
Sbjct: 199 TAMLAG 204
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 159 DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKS-DVFSFGVLL 217
D + N KISDFG+A VF N E N++ GT Y+APE F + DV+S G++L
Sbjct: 139 DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
Query: 218 LEIISG 223
+++G
Sbjct: 199 TAMLAG 204
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 110/268 (41%), Gaps = 46/268 (17%)
Query: 57 NKLGEGGFGPVYKGV-LNDDKEIAVK--RLSRSSGQGLQEFKNLIAKLQHKNLVRXXXXX 113
++G G FG V+ G LN DK +A+K R S + E ++ KL H LV+
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 114 XXXXXXXXICEYMPNKSL-DFL-----LF--DSTRSVQLDWNRRMCIINGIARDHK---- 161
+ E+M + L D+L LF ++ + LD M + + H+
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLAA 131
Query: 162 --------MNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSF 213
K+SDFGM R +Q ++T + +PE +S KSDV+SF
Sbjct: 132 RNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSSKSDVWSF 190
Query: 214 GVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFILEELLKRIH 273
GVL+ E+ S K YE + E+++ + + + L H
Sbjct: 191 GVLMWEVFSEGKIP----YENRSN--------------SEVVEDISTGFRLYKPRLASTH 232
Query: 274 IGLL---CVQEDPADRPTMSSVVFMLAT 298
+ + C +E P DRP S ++ LA
Sbjct: 233 VYQIMNHCWKERPEDRPAFSRLLRQLAA 260
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 159 DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKS-DVFSFGVLL 217
D + N KISDFG+A VF N E N++ GT Y+APE F + DV+S G++L
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 218 LEIISG 223
+++G
Sbjct: 198 TAMLAG 203
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 113/267 (42%), Gaps = 46/267 (17%)
Query: 57 NKLGEGGFGPVYKGV-LNDDKEIAVKRLSRSS--GQGLQEFKNLIAKLQHKNLVRXXXXX 113
++G G FG V+ G LN DK +A+K + S E ++ KL H LV+
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDK-VAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 114 XXXXXXXXICEYMPNKSL-DFL-----LF--DSTRSVQLDWNRRM------CIING--IA 157
+ E+M + L D+L LF ++ + LD M C+I+ A
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAA 151
Query: 158 RDHKMNP----KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSF 213
R+ + K+SDFGM R +Q ++T + +PE +S KSDV+SF
Sbjct: 152 RNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSSKSDVWSF 210
Query: 214 GVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFILEELLKRIH 273
GVL+ E+ S K YE + E+++ + + + L H
Sbjct: 211 GVLMWEVFSEGKIP----YENRSN--------------SEVVEDISTGFRLYKPRLASTH 252
Query: 274 IGLL---CVQEDPADRPTMSSVVFMLA 297
+ + C +E P DRP S ++ LA
Sbjct: 253 VYQIMNHCWKERPEDRPAFSRLLRQLA 279
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 159 DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLL 218
D K N K+ DFG+AR+ N E VGT YM+PE ++ KSD++S G LL
Sbjct: 150 DGKQNVKLGDFGLARIL--NHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLY 207
Query: 219 EIIS 222
E+ +
Sbjct: 208 ELCA 211
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 90/217 (41%), Gaps = 42/217 (19%)
Query: 47 HEATRNFSNE---------NKLGEGGFGPVYKGVLN----DDKEIAVKRL-----SRSSG 88
+EA R F+ E +G G FG V +G L + +A+K L R
Sbjct: 3 NEAVREFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRR 62
Query: 89 QGLQEFKNLIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLD-FL-LFDSTRSV---- 142
+ L E +++ + +H N++R + E+M N +LD FL L D +V
Sbjct: 63 EFLSE-ASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLV 121
Query: 143 --------------QLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVV 188
++ + R I + + K+SDFG++R N S+ +
Sbjct: 122 GMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSL 181
Query: 189 G---TYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
G + APE F+ SD +S+G+++ E++S
Sbjct: 182 GGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 32/58 (55%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KI DFG+AR N +MAPE + ++S KSDV+S+GVLL EI S
Sbjct: 239 KICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 86/226 (38%), Gaps = 41/226 (18%)
Query: 47 HEATRNFSNENKLGEGGFGPVYKGVL------NDDKEIAVKRLSRSSGQGLQEFK---NL 97
H N + +LGEG FG V+ D +AVK L +S ++F L
Sbjct: 9 HIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAEL 68
Query: 98 IAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLD----------FLLFDSTRSVQLDWN 147
+ LQH+++V+ + EYM + L+ L+ + +L +
Sbjct: 69 LTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQS 128
Query: 148 RRMCIINGIA-------------RD---------HKMNPKISDFGMARVFGGNQSEANTN 185
+ + I IA RD + KI DFGM+R
Sbjct: 129 QMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGG 188
Query: 186 RVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYL 231
+ +M PE + F+ +SDV+S GV+L EI + K + L
Sbjct: 189 HTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL 234
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 83/210 (39%), Gaps = 50/210 (23%)
Query: 59 LGEGGFGPVYKGVLNDDKEIAVKRLSRSSGQGLQEFKNL--IAKLQHKNLVR-----XXX 111
+G G +G VYKG L D++ +AVK S ++ Q KN+ + ++H N+ R
Sbjct: 21 IGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERV 79
Query: 112 XXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIARDHKMNPK------ 165
+ EY PN SL L T + G+A H P+
Sbjct: 80 TADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKP 139
Query: 166 ---------------------ISDFGMARVFGGNQ----SEANTNRV--VGTYGYMAPEY 198
ISDFG++ GN+ E + + VGT YMAPE
Sbjct: 140 AISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPE- 198
Query: 199 ALEGLFSVKS--------DVFSFGVLLLEI 220
LEG +++ D+++ G++ EI
Sbjct: 199 VLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 111/278 (39%), Gaps = 52/278 (18%)
Query: 46 IHEATRNFSNENKLGEGGFGPVYKG-VLNDDKEIAVKRLSRSSG------QGLQEFKNLI 98
I E +F N LG+G F VY+ ++ E+A+K + + + Q +Q +
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 99 AKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGI 156
+L+H +++ + E N ++ L + + + R II G+
Sbjct: 66 CQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGM 125
Query: 157 ARDH------------------KMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEY 198
H MN KI+DFG+A + T + GT Y++PE
Sbjct: 126 LYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEI 183
Query: 199 ALEGLFSVKSDVFSFGVLLLEIISGRK--DTRFYLYEQGQSLLT-YTWKLWCEGNAQELM 255
A ++SDV+S G + ++ GR DT + +L Y + A++L
Sbjct: 184 ATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDL- 242
Query: 256 DPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSVV 293
+ +LL+R +PADR ++SSV+
Sbjct: 243 ---------IHQLLRR----------NPADRLSLSSVL 261
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGV 215
I + M+ +I+DFG A+V +A N VGT Y++PE E S SD+++ G
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGC 222
Query: 216 LLLEIISG 223
++ ++++G
Sbjct: 223 IIYQLVAG 230
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 86/218 (39%), Gaps = 49/218 (22%)
Query: 49 ATRNFSNENKLGEGGFGPVY----KGVLNDDKE--IAVKRLSRSSGQGLQ-EFKNLIAKL 101
A + +LG+G FG VY KGV+ D+ E +A+K ++ ++ + EF N + +
Sbjct: 8 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 67
Query: 102 QHKN---LVRXXXXXXXXXXXXXICEYMPNKSLDFLL----------------------- 135
+ N +VR I E M L L
Sbjct: 68 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 127
Query: 136 -----------FDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANT 184
++ + V D R C++ A D + KI DFGM R
Sbjct: 128 MAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFTV--KIGDFGMTRDIXETDXXRKG 182
Query: 185 NRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+ + +M+PE +G+F+ SDV+SFGV+L EI +
Sbjct: 183 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 159 DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLL 218
D K N K+ DFG+AR+ + S A VGT YM+PE ++ KSD++S G LL
Sbjct: 150 DGKQNVKLGDFGLARILNHDTSFAKA--FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLY 207
Query: 219 EIIS 222
E+ +
Sbjct: 208 ELCA 211
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KI DFG+AR + +MAPE + +++++SDV+SFGVLL EI S
Sbjct: 188 KICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KI DFG+AR + +MAPE + +++++SDV+SFGVLL EI S
Sbjct: 188 KICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 28/196 (14%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSSGQGLQEFKNLIAKLQH---KNLVR 108
F KLGEG +G VYK + + +I A+K++ S LQE I+ +Q ++V+
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVK 88
Query: 109 XXXXXXXXXXXXXICEY-----------MPNKSLDFLLFDSTRSVQLDWNRRMCIINGIA 157
+ EY + NK+L + L + + I
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIH 148
Query: 158 RDHKM---------NPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKS 208
RD K + K++DFG+A A N V+GT +MAPE E ++ +
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVAGQL--TDXMAKRNXVIGTPFWMAPEVIQEIGYNCVA 206
Query: 209 DVFSFGVLLLEIISGR 224
D++S G+ +E+ G+
Sbjct: 207 DIWSLGITAIEMAEGK 222
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KI DFG+AR + +MAPE + +++++SDV+SFGVLL EI S
Sbjct: 188 KICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 165 KISDFGMARVFG--GNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
K+ DFG+AR GN S T V+GT Y++PE A +SDV+S G +L E+++
Sbjct: 156 KVMDFGIARAIADSGN-SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 223 G 223
G
Sbjct: 215 G 215
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 165 KISDFGMARVFG--GNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
K+ DFG+AR GN S T V+GT Y++PE A +SDV+S G +L E+++
Sbjct: 156 KVMDFGIARAIADSGN-SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 223 G 223
G
Sbjct: 215 G 215
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 165 KISDFGMARVFG--GNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
K+ DFG+AR GN S T V+GT Y++PE A +SDV+S G +L E+++
Sbjct: 156 KVMDFGIARAIADSGN-SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 223 G 223
G
Sbjct: 215 G 215
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 165 KISDFGMARVFG--GNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
K+ DFG+AR GN S T V+GT Y++PE A +SDV+S G +L E+++
Sbjct: 156 KVMDFGIARAIADSGN-SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 223 G 223
G
Sbjct: 215 G 215
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KI DFG+AR + +MAPE + +++++SDV+SFGVLL EI S
Sbjct: 179 KICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KI DFG+AR + +MAPE + +++++SDV+SFGVLL EI S
Sbjct: 179 KICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 123 CEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEA 182
C Y + +++L S + + D R ++ D+ M KI+DFG+AR
Sbjct: 155 CAYQVARGMEYLA--SKKCIHRDLAARNVLVT---EDNVM--KIADFGLARDIHHIDXXK 207
Query: 183 NTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
T +MAPE + +++ +SDV+SFGVLL EI +
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 86/218 (39%), Gaps = 49/218 (22%)
Query: 49 ATRNFSNENKLGEGGFGPVY----KGVLNDDKE--IAVKRLSRSSGQGLQ-EFKNLIAKL 101
A + +LG+G FG VY KGV+ D+ E +A+K ++ ++ + EF N + +
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 102 QHKN---LVRXXXXXXXXXXXXXICEYMPNKSLDFLL----------------------- 135
+ N +VR I E M L L
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 136
Query: 136 -----------FDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANT 184
++ + V D R C++ A D + KI DFGM R
Sbjct: 137 MAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFTV--KIGDFGMTRDIXETDXXRKG 191
Query: 185 NRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+ + +M+PE +G+F+ SDV+SFGV+L EI +
Sbjct: 192 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 165 KISDFGMARVFG--GNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
K+ DFG+AR GN S T V+GT Y++PE A +SDV+S G +L E+++
Sbjct: 156 KVVDFGIARAIADSGN-SVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 223 G 223
G
Sbjct: 215 G 215
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 13/110 (11%)
Query: 153 INGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFS 212
++ I D + KI+DFGM + +A TN GT Y+APE L ++ D +S
Sbjct: 147 LDNILLDKDGHIKIADFGMCK--ENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWS 204
Query: 213 FGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKL-------WCEGNAQELM 255
FGVLL E++ G+ + Q + L ++ ++ W E A++L+
Sbjct: 205 FGVLLYEMLIGQSP----FHGQDEEELFHSIRMDNPFYPRWLEKEAKDLL 250
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 86/200 (43%), Gaps = 41/200 (20%)
Query: 59 LGEGGFGPVYKGVL--NDDKEI--AVKRLSRSSGQG-LQEF--KNLIAK-LQHKNLVRXX 110
+G G FG VY G L ND K+I AVK L+R + G + +F + +I K H N++
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 111 XXXXXXX-XXXXICEYMPNKSL--------------DFLLFD-----------STRSVQL 144
+ YM + L D + F S + V
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 155
Query: 145 DWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGT--YGYMAPEYALEG 202
D R C++ D K K++DFG+AR + ++ N+ +MA E
Sbjct: 156 DLAARNCML-----DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 210
Query: 203 LFSVKSDVFSFGVLLLEIIS 222
F+ KSDV+SFGVLL E+++
Sbjct: 211 KFTTKSDVWSFGVLLWELMT 230
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 33/199 (16%)
Query: 56 ENKLGEGGFGPVYKGVLN----DDKEIAVKRL-----SRSSGQGLQEFKNLIAKLQHKNL 106
E +G G FG V +G L + +A+K L R + L E +++ + +H N+
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSE-ASIMGQFEHPNI 77
Query: 107 VRXXXXXXXXXXXXXICEYMPNKSLD-FL-LFDSTRSV------------------QLDW 146
+R + E+M N +LD FL L D +V ++ +
Sbjct: 78 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSY 137
Query: 147 NRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVG---TYGYMAPEYALEGL 203
R I + + K+SDFG++R N S+ +G + APE
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRK 197
Query: 204 FSVKSDVFSFGVLLLEIIS 222
F+ SD +S+G+++ E++S
Sbjct: 198 FTSASDAWSYGIVMWEVMS 216
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 86/200 (43%), Gaps = 41/200 (20%)
Query: 59 LGEGGFGPVYKGVL--NDDKEI--AVKRLSRSSGQG-LQEF--KNLIAK-LQHKNLVRXX 110
+G G FG VY G L ND K+I AVK L+R + G + +F + +I K H N++
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 111 XXXXXXX-XXXXICEYMPNKSL--------------DFLLFD-----------STRSVQL 144
+ YM + L D + F S + V
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 158
Query: 145 DWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGT--YGYMAPEYALEG 202
D R C++ D K K++DFG+AR + ++ N+ +MA E
Sbjct: 159 DLAARNCML-----DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 213
Query: 203 LFSVKSDVFSFGVLLLEIIS 222
F+ KSDV+SFGVLL E+++
Sbjct: 214 KFTTKSDVWSFGVLLWELMT 233
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 86/200 (43%), Gaps = 41/200 (20%)
Query: 59 LGEGGFGPVYKGVL--NDDKEI--AVKRLSRSSGQG-LQEF--KNLIAK-LQHKNLVRXX 110
+G G FG VY G L ND K+I AVK L+R + G + +F + +I K H N++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 111 XXXXXXX-XXXXICEYMPNKSL--------------DFLLFD-----------STRSVQL 144
+ YM + L D + F S + V
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 157
Query: 145 DWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGT--YGYMAPEYALEG 202
D R C++ D K K++DFG+AR + ++ N+ +MA E
Sbjct: 158 DLAARNCML-----DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 212
Query: 203 LFSVKSDVFSFGVLLLEIIS 222
F+ KSDV+SFGVLL E+++
Sbjct: 213 KFTTKSDVWSFGVLLWELMT 232
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 88/222 (39%), Gaps = 40/222 (18%)
Query: 41 FPLDLIHEATRNFSNE---------NKLGEGGFGPVYKGVLN--DDKEIAVKRLSRSSGQ 89
F + +EA R F+ E +G G FG V G L +EI V + SG
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 90 GLQEFKN------LIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLL------FD 137
++ ++ ++ + H N++ I E+M N SLD L F
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 133
Query: 138 STRSV--------------QLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEAN 183
+ V +++ R I + + K+SDFG++R + S+
Sbjct: 134 VIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT 193
Query: 184 TNRVVG---TYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+G + APE F+ SDV+S+G+++ E++S
Sbjct: 194 YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 86/200 (43%), Gaps = 41/200 (20%)
Query: 59 LGEGGFGPVYKGVL--NDDKEI--AVKRLSRSSGQG-LQEF--KNLIAK-LQHKNLVRXX 110
+G G FG VY G L ND K+I AVK L+R + G + +F + +I K H N++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 111 XXXXXXX-XXXXICEYMPNKSL--------------DFLLFD-----------STRSVQL 144
+ YM + L D + F S + V
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 157
Query: 145 DWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGT--YGYMAPEYALEG 202
D R C++ D K K++DFG+AR + ++ N+ +MA E
Sbjct: 158 DLAARNCML-----DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 212
Query: 203 LFSVKSDVFSFGVLLLEIIS 222
F+ KSDV+SFGVLL E+++
Sbjct: 213 KFTTKSDVWSFGVLLWELMT 232
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 86/200 (43%), Gaps = 41/200 (20%)
Query: 59 LGEGGFGPVYKGVL--NDDKEI--AVKRLSRSSGQG-LQEF--KNLIAK-LQHKNLVRXX 110
+G G FG VY G L ND K+I AVK L+R + G + +F + +I K H N++
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 111 XXXXXXX-XXXXICEYMPNKSL--------------DFLLFD-----------STRSVQL 144
+ YM + L D + F S + V
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 162
Query: 145 DWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGT--YGYMAPEYALEG 202
D R C++ D K K++DFG+AR + ++ N+ +MA E
Sbjct: 163 DLAARNCML-----DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 217
Query: 203 LFSVKSDVFSFGVLLLEIIS 222
F+ KSDV+SFGVLL E+++
Sbjct: 218 KFTTKSDVWSFGVLLWELMT 237
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 85/200 (42%), Gaps = 41/200 (20%)
Query: 59 LGEGGFGPVYKGVL--NDDKEI--AVKRLSRSSGQG-LQEF--KNLIAK-LQHKNLVRXX 110
+G G FG VY G L ND K+I AVK L+R + G + +F + +I K H N++
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 111 XXXXXXX-XXXXICEYMPNKSL--------------DFLLFD-----------STRSVQL 144
+ YM + L D + F S + V
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 156
Query: 145 DWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGT--YGYMAPEYALEG 202
D R C++ D K K++DFG+AR + + N+ +MA E
Sbjct: 157 DLAARNCML-----DEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQ 211
Query: 203 LFSVKSDVFSFGVLLLEIIS 222
F+ KSDV+SFGVLL E+++
Sbjct: 212 KFTTKSDVWSFGVLLWELMT 231
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 86/200 (43%), Gaps = 41/200 (20%)
Query: 59 LGEGGFGPVYKGVL--NDDKEI--AVKRLSRSSGQG-LQEF--KNLIAK-LQHKNLVRXX 110
+G G FG VY G L ND K+I AVK L+R + G + +F + +I K H N++
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 111 XXXXXXX-XXXXICEYMPNKSL--------------DFLLFD-----------STRSVQL 144
+ YM + L D + F S + V
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 216
Query: 145 DWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGT--YGYMAPEYALEG 202
D R C++ D K K++DFG+AR + ++ N+ +MA E
Sbjct: 217 DLAARNCML-----DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 271
Query: 203 LFSVKSDVFSFGVLLLEIIS 222
F+ KSDV+SFGVLL E+++
Sbjct: 272 KFTTKSDVWSFGVLLWELMT 291
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 165 KISDFGMARVFG--GNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
K+ DFG+AR GN S T V+GT Y++PE A +SDV+S G +L E+++
Sbjct: 173 KVMDFGIARAIADSGN-SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 231
Query: 223 G 223
G
Sbjct: 232 G 232
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 13/110 (11%)
Query: 153 INGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFS 212
++ I D + KI+DFGM + +A TN GT Y+APE L ++ D +S
Sbjct: 146 LDNILLDKDGHIKIADFGMCK--ENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWS 203
Query: 213 FGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKL-------WCEGNAQELM 255
FGVLL E++ G+ + Q + L ++ ++ W E A++L+
Sbjct: 204 FGVLLYEMLIGQSP----FHGQDEEELFHSIRMDNPFYPRWLEKEAKDLL 249
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KI DFG+AR + +MAPE + +++++SDV+SFGVLL EI S
Sbjct: 188 KICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 112/283 (39%), Gaps = 51/283 (18%)
Query: 59 LGEGGFGPVYKGV-LNDDKEIAVK----RLSRSSGQGLQEFKNLIAKLQHKNLVRXXXXX 113
LG+G +G VY G L++ IA+K R SR S Q L E L L+HKN+V+
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS-QPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 114 XXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC------IING---------IAR 158
E +P SL LL ++ L N + I+ G + R
Sbjct: 89 SENGFIKIFMEQVPGGSLSALL--RSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHR 146
Query: 159 DHKMNP----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGL--FSV 206
D K + KISDFG ++ G T GT YMAPE +G +
Sbjct: 147 DIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEIIDKGPRGYGK 204
Query: 207 KSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFILE 266
+D++S G ++E+ +G+ FY + Q+ + E M K +FIL+
Sbjct: 205 AADIWSLGCTIIEMATGK--PPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAK-AFILK 261
Query: 267 ELLKRIHIGLLCVQEDPADRPTMSSVVFMLATDTITLLQPTQP 309
C + DP R + ++ + + TQP
Sbjct: 262 -----------CFEPDPDKRACANDLLVDEFLKVSSKKKKTQP 293
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 80/198 (40%), Gaps = 31/198 (15%)
Query: 56 ENKLGEGGFGPVYKGVLN--DDKEIAVKRLSRSSGQGLQEFKN------LIAKLQHKNLV 107
E +G G FG V G L +EI V + SG ++ ++ ++ + H N++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 108 RXXXXXXXXXXXXXICEYMPNKSLDFLL------FDSTRSV--------------QLDWN 147
I E+M N SLD L F + V +++
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYV 131
Query: 148 RRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVG---TYGYMAPEYALEGLF 204
R I + + K+SDFG++R + S+ +G + APE F
Sbjct: 132 HRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKF 191
Query: 205 SVKSDVFSFGVLLLEIIS 222
+ SDV+S+G+++ E++S
Sbjct: 192 TSASDVWSYGIVMWEVMS 209
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 86/200 (43%), Gaps = 41/200 (20%)
Query: 59 LGEGGFGPVYKGVL--NDDKEI--AVKRLSRSSGQG-LQEF--KNLIAK-LQHKNLVRXX 110
+G G FG VY G L ND K+I AVK L+R + G + +F + +I K H N++
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 111 XXXXXXX-XXXXICEYMPNKSL--------------DFLLFD-----------STRSVQL 144
+ YM + L D + F S + V
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 158
Query: 145 DWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGT--YGYMAPEYALEG 202
D R C++ D K K++DFG+AR + ++ N+ +MA E
Sbjct: 159 DLAARNCML-----DEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQ 213
Query: 203 LFSVKSDVFSFGVLLLEIIS 222
F+ KSDV+SFGVLL E+++
Sbjct: 214 KFTTKSDVWSFGVLLWELMT 233
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 28/179 (15%)
Query: 136 FDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMA 195
++ + V + R C++ H KI DFGM R + + +MA
Sbjct: 147 LNAKKFVHRNLAARNCMVA-----HDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 201
Query: 196 PEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLT--YTWKLWCEGNAQE 253
PE +G+F+ SD++SFGV+L EI S L EQ L+ K +G +
Sbjct: 202 PESLKDGVFTTSSDMWSFGVVLWEITS--------LAEQPYQGLSNEQVLKFVMDGGYLD 253
Query: 254 LMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSVVFMLATDTITLLQPTQPAFS 312
D + + +L++ +C Q +P RPT +V +L D L P+ P S
Sbjct: 254 QPDNCPER---VTDLMR------MCWQFNPNMRPTFLEIVNLLKDD----LHPSFPEVS 299
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 28/179 (15%)
Query: 136 FDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMA 195
++ + V + R C++ H KI DFGM R + + +MA
Sbjct: 146 LNAKKFVHRNLAARNCMVA-----HDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 196 PEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLT--YTWKLWCEGNAQE 253
PE +G+F+ SD++SFGV+L EI S L EQ L+ K +G +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS--------LAEQPYQGLSNEQVLKFVMDGGYLD 252
Query: 254 LMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSVVFMLATDTITLLQPTQPAFS 312
D + + +L++ +C Q +P RPT +V +L D L P+ P S
Sbjct: 253 QPDNCPER---VTDLMR------MCWQFNPNMRPTFLEIVNLLKDD----LHPSFPEVS 298
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 90/218 (41%), Gaps = 43/218 (19%)
Query: 42 PLDLIHEATRNFSNENK----LGEGGFGPVYKGVLNDDK----EIAVKRLSR------SS 87
P + +T FS+ K LG+G FG V +L DK E AVK +S+ +
Sbjct: 13 PGXFVQHSTAIFSDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTD 69
Query: 88 GQGLQEFKNLIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWN 147
+ L L+ +L H N+ + + E L + R ++D
Sbjct: 70 KESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA 129
Query: 148 RRM-CIINGIARDHK---------------------MNPKISDFGMARVFGGNQSEANTN 185
R + +++GI HK N +I DFG++ F ++ +
Sbjct: 130 RIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK- 188
Query: 186 RVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+GT Y+APE L G + K DV+S GV+L ++SG
Sbjct: 189 --IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 86/205 (41%), Gaps = 31/205 (15%)
Query: 48 EATRNFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAK 100
E NF K+GEG +G VYK E +A+K++ + ++E +L+ +
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKE 65
Query: 101 LQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIAR 158
L H N+V+ + E++ F+ + + L + ++ G+A
Sbjct: 66 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 159 DHK-------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYAL 200
H + P K++DFG+AR F G T+ VV T Y APE L
Sbjct: 126 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEILL 183
Query: 201 -EGLFSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 184 GXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDK-EIAVKRLSRSSGQG-----LQEFKNLIAKLQHKNL 106
++N + +GEG +G V N +K +A+K++S Q L+E K L+A +H+N+
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLA-FRHENI 85
Query: 107 VRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC-----IINGIARDHK 161
+ Y+ ++ L+ ++ L N +C I+ G+ H
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICYFLYQILRGLKYIHS 144
Query: 162 MNP------------------KISDFGMARVFGGNQSEAN-TNRVVGTYGYMAPEYALEG 202
N KI DFG+ARV + V T Y APE L
Sbjct: 145 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 203 LFSVKS-DVFSFGVLLLEIISGR 224
KS D++S G +L E++S R
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 83/196 (42%), Gaps = 34/196 (17%)
Query: 57 NKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAKLQHKNLVRX 109
KLGEG +G VYK + E +A+KR+ G ++E +L+ +LQH+N++
Sbjct: 40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREV-SLLKELQHRNIIEL 98
Query: 110 XXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIARDHK-------M 162
I EY N ++ + S+++ + +ING+ H +
Sbjct: 99 KSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDL 158
Query: 163 NP----------------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEG-LFS 205
P KI DFG+AR FG + T+ ++ T Y PE L +S
Sbjct: 159 KPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQF-THEII-TLWYRPPEILLGSRHYS 216
Query: 206 VKSDVFSFGVLLLEII 221
D++S + E++
Sbjct: 217 TSVDIWSIACIWAEML 232
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 81/194 (41%), Gaps = 34/194 (17%)
Query: 59 LGEGGFGPVYKGVLN-DDKEIAVKRLSRSSGQG------LQEFKNLIAKLQHKNLVRXXX 111
LG+G FG V K +E AVK ++++S + L+E + L+ KL H N+++
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVE-LLKKLDHPNIMKLFE 88
Query: 112 XXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRM-CIINGIARDHKMNP------ 164
+ E L + R + D R + + +GI HK N
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLK 148
Query: 165 ---------------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSD 209
KI DFG++ F Q +GT Y+APE L G + K D
Sbjct: 149 PENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPE-VLRGTYDEKCD 204
Query: 210 VFSFGVLLLEIISG 223
V+S GV+L ++SG
Sbjct: 205 VWSAGVILYILLSG 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 81/194 (41%), Gaps = 34/194 (17%)
Query: 59 LGEGGFGPVYKGVLN-DDKEIAVKRLSRSSGQG------LQEFKNLIAKLQHKNLVRXXX 111
LG+G FG V K +E AVK ++++S + L+E + L+ KL H N+++
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVE-LLKKLDHPNIMKLFE 88
Query: 112 XXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC-IINGIARDHKMNP------ 164
+ E L + R + D R + + +GI HK N
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLK 148
Query: 165 ---------------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSD 209
KI DFG++ F Q +GT Y+APE L G + K D
Sbjct: 149 PENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPE-VLRGTYDEKCD 204
Query: 210 VFSFGVLLLEIISG 223
V+S GV+L ++SG
Sbjct: 205 VWSAGVILYILLSG 218
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGV 215
I + M+ +I+DFG A+V +A N VGT Y++PE E SD+++ G
Sbjct: 140 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 199
Query: 216 LLLEIISG 223
++ ++++G
Sbjct: 200 IIYQLVAG 207
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGV 215
I + M+ +I+DFG A+V +A N VGT Y++PE E SD+++ G
Sbjct: 141 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 200
Query: 216 LLLEIISG 223
++ ++++G
Sbjct: 201 IIYQLVAG 208
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGV 215
I + M+ +I+DFG A+V +A N VGT Y++PE E SD+++ G
Sbjct: 139 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 198
Query: 216 LLLEIISG 223
++ ++++G
Sbjct: 199 IIYQLVAG 206
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KI DFG+AR + +MAPE + +++++SDV+SFGVLL EI S
Sbjct: 188 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGV 215
I + M+ +I+DFG A+V +A N VGT Y++PE E SD+++ G
Sbjct: 138 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 197
Query: 216 LLLEIISG 223
++ ++++G
Sbjct: 198 IIYQLVAG 205
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDK-EIAVKRLSRSSGQG-----LQEFKNLIAKLQHKNL 106
++N + +GEG +G V N +K +A+K++S Q L+E K L+A +H+N+
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLA-FRHENI 85
Query: 107 VRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC-----IINGIARDHK 161
+ Y+ ++ L+ ++ L N +C I+ G+ H
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICYFLYQILRGLKYIHS 144
Query: 162 MNP------------------KISDFGMARVFGGNQSEAN-TNRVVGTYGYMAPEYALEG 202
N KI DFG+ARV + V T Y APE L
Sbjct: 145 ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 203 LFSVKS-DVFSFGVLLLEIISGR 224
KS D++S G +L E++S R
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 123 CEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEA 182
C Y + +++L S + + D R ++ D+ M KI+DFG+AR
Sbjct: 144 CAYQVARGMEYLA--SKKCIHRDLAARNVLVT---EDNVM--KIADFGLARDIHHIDYYK 196
Query: 183 NTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
T +MAPE + +++ +SDV+SFGVLL EI +
Sbjct: 197 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 123 CEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEA 182
C Y + +++L S + + D R ++ D+ M KI+DFG+AR
Sbjct: 140 CAYQVARGMEYLA--SKKCIHRDLAARNVLVT---EDNVM--KIADFGLARDIHHIDYYK 192
Query: 183 NTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
T +MAPE + +++ +SDV+SFGVLL EI +
Sbjct: 193 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 123 CEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEA 182
C Y + +++L S + + D R ++ D+ M KI+DFG+AR
Sbjct: 148 CAYQVARGMEYLA--SKKCIHRDLAARNVLVT---EDNVM--KIADFGLARDIHHIDYYK 200
Query: 183 NTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
T +MAPE + +++ +SDV+SFGVLL EI +
Sbjct: 201 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 123 CEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEA 182
C Y + +++L S + + D R ++ D+ M KI+DFG+AR
Sbjct: 147 CAYQVARGMEYLA--SKKCIHRDLAARNVLVT---EDNVM--KIADFGLARDIHHIDYYK 199
Query: 183 NTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
T +MAPE + +++ +SDV+SFGVLL EI +
Sbjct: 200 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 86/205 (41%), Gaps = 31/205 (15%)
Query: 48 EATRNFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAK 100
E NF K+GEG +G VYK E +A+K++ + ++E +L+ +
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKE 65
Query: 101 LQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIAR 158
L H N+V+ + E++ F+ + + L + ++ G+A
Sbjct: 66 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 159 DHK-------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYAL 200
H + P K++DFG+AR F G T+ VV T Y APE L
Sbjct: 126 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEILL 183
Query: 201 E-GLFSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 184 GCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 91/218 (41%), Gaps = 43/218 (19%)
Query: 42 PLDLIHEATRNFSNENK----LGEGGFGPVYKGVLNDDK----EIAVKRLSR------SS 87
P + +T FS+ K LG+G FG V +L DK E AVK +S+ +
Sbjct: 19 PGMFVQHSTAIFSDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTD 75
Query: 88 GQGLQEFKNLIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWN 147
+ L L+ +L H N+++ + E L + R ++D
Sbjct: 76 KESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA 135
Query: 148 RRM-CIINGIARDHK---------------------MNPKISDFGMARVFGGNQSEANTN 185
R + +++GI HK N +I DFG++ F ++ +
Sbjct: 136 RIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK- 194
Query: 186 RVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+GT Y+APE L G + K DV+S GV+L ++SG
Sbjct: 195 --IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KI DFG+AR + +MAPE + +++++SDV+SFGVLL EI S
Sbjct: 190 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 85/200 (42%), Gaps = 41/200 (20%)
Query: 59 LGEGGFGPVYKGVL--NDDKEI--AVKRLSRSSGQG-LQEF--KNLIAK-LQHKNLVRXX 110
+G G FG VY G L ND K+I AVK L+R + G + +F + +I K H N++
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 111 XXXXXXX-XXXXICEYMPNKSL--------------DFLLFD-----------STRSVQL 144
+ YM + L D + F S + V
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 155
Query: 145 DWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGT--YGYMAPEYALEG 202
D R C++ D K K++DFG+AR + + N+ +MA E
Sbjct: 156 DLAARNCML-----DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 210
Query: 203 LFSVKSDVFSFGVLLLEIIS 222
F+ KSDV+SFGVLL E+++
Sbjct: 211 KFTTKSDVWSFGVLLWELMT 230
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 91/223 (40%), Gaps = 34/223 (15%)
Query: 33 VESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKGVL-----NDDKEIAVKRLSRSS 87
+ S++ P +D H R LGEG FG V N +++AVK L S
Sbjct: 3 IVSEKKPATEVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES 62
Query: 88 G----QGLQEFKNLIAKLQHKNLVRXXXXXXXX--XXXXXICEYMPNKSLDFLLFDSTRS 141
G L++ ++ L H+N+V+ I E++P+ SL L +
Sbjct: 63 GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK 122
Query: 142 V----QLDWNRRMC----------------IINGIARDHKMNPKISDFGMARVFGGNQSE 181
+ QL + ++C + + + KI DFG+ + ++
Sbjct: 123 INLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEX 182
Query: 182 ANT--NRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+R + Y APE ++ F + SDV+SFGV L E+++
Sbjct: 183 XTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KI DFG+AR + +MAPE + +++++SDV+SFGVLL EI S
Sbjct: 179 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 85/200 (42%), Gaps = 41/200 (20%)
Query: 59 LGEGGFGPVYKGVL--NDDKEI--AVKRLSRSSGQG-LQEF--KNLIAK-LQHKNLVRXX 110
+G G FG VY G L ND K+I AVK L+R + G + +F + +I K H N++
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 111 XXXXXXX-XXXXICEYMPNKSL--------------DFLLFD-----------STRSVQL 144
+ YM + L D + F S + V
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 149
Query: 145 DWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGT--YGYMAPEYALEG 202
D R C++ D K K++DFG+AR + + N+ +MA E
Sbjct: 150 DLAARNCML-----DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 204
Query: 203 LFSVKSDVFSFGVLLLEIIS 222
F+ KSDV+SFGVLL E+++
Sbjct: 205 KFTTKSDVWSFGVLLWELMT 224
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 31/201 (15%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAKLQHK 104
NF K+GEG +G VYK E +A+K++ + ++E +L+ +L H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKELNHP 62
Query: 105 NLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARDHK- 161
N+V+ + E++ F+ + + L + ++ G+A H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 162 ------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYAL-EGL 203
+ P K++DFG+AR F G T+ VV T Y APE L
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEILLGXKY 180
Query: 204 FSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRR 201
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGV 215
I + M+ +I+DFG A+V +A N VGT Y++PE E SD+++ G
Sbjct: 145 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 204
Query: 216 LLLEIISG 223
++ ++++G
Sbjct: 205 IIYQLVAG 212
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 123 CEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEA 182
C Y + +++L S + + D R ++ D+ M KI+DFG+AR
Sbjct: 155 CAYQVARGMEYLA--SKKCIHRDLAARNVLVT---EDNVM--KIADFGLARDIHHIDYYK 207
Query: 183 NTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
T +MAPE + +++ +SDV+SFGVLL EI +
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 85/200 (42%), Gaps = 41/200 (20%)
Query: 59 LGEGGFGPVYKGVL--NDDKEI--AVKRLSRSSGQG-LQEF--KNLIAK-LQHKNLVRXX 110
+G G FG VY G L ND K+I AVK L+R + G + +F + +I K H N++
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 111 XXXXXXX-XXXXICEYMPNKSL--------------DFLLFD-----------STRSVQL 144
+ YM + L D + F S + V
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 176
Query: 145 DWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGT--YGYMAPEYALEG 202
D R C++ D K K++DFG+AR + + N+ +MA E
Sbjct: 177 DLAARNCML-----DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 231
Query: 203 LFSVKSDVFSFGVLLLEIIS 222
F+ KSDV+SFGVLL E+++
Sbjct: 232 KFTTKSDVWSFGVLLWELMT 251
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 123 CEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEA 182
C Y + +++L S + + D R ++ D+ M KI+DFG+AR
Sbjct: 155 CAYQVARGMEYLA--SKKCIHRDLAARNVLVT---EDNVM--KIADFGLARDIHHIDYYK 207
Query: 183 NTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
T +MAPE + +++ +SDV+SFGVLL EI +
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KI DFG+AR + +MAPE + +++++SDV+SFGVLL EI S
Sbjct: 238 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 85/200 (42%), Gaps = 41/200 (20%)
Query: 59 LGEGGFGPVYKGVL--NDDKEI--AVKRLSRSSGQG-LQEF--KNLIAK-LQHKNLVRXX 110
+G G FG VY G L ND K+I AVK L+R + G + +F + +I K H N++
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 111 XXXXXXX-XXXXICEYMPNKSL--------------DFLLFD-----------STRSVQL 144
+ YM + L D + F S + V
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 152
Query: 145 DWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGT--YGYMAPEYALEG 202
D R C++ D K K++DFG+AR + + N+ +MA E
Sbjct: 153 DLAARNCML-----DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 207
Query: 203 LFSVKSDVFSFGVLLLEIIS 222
F+ KSDV+SFGVLL E+++
Sbjct: 208 KFTTKSDVWSFGVLLWELMT 227
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 85/200 (42%), Gaps = 41/200 (20%)
Query: 59 LGEGGFGPVYKGVL--NDDKEI--AVKRLSRSSGQG-LQEF--KNLIAK-LQHKNLVRXX 110
+G G FG VY G L ND K+I AVK L+R + G + +F + +I K H N++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 111 XXXXXXX-XXXXICEYMPNKSL--------------DFLLFD-----------STRSVQL 144
+ YM + L D + F S + V
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 157
Query: 145 DWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGT--YGYMAPEYALEG 202
D R C++ D K K++DFG+AR + + N+ +MA E
Sbjct: 158 DLAARNCML-----DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 212
Query: 203 LFSVKSDVFSFGVLLLEIIS 222
F+ KSDV+SFGVLL E+++
Sbjct: 213 KFTTKSDVWSFGVLLWELMT 232
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 86/204 (42%), Gaps = 31/204 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAKL 101
+ NF K+GEG +G VYK E +A+K++ + ++E +L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKEL 59
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARD 159
H N+V+ + E++ DF+ + + L + ++ G+A
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 160 HK-------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
H + P K++DFG+AR F G + VV T Y APE L
Sbjct: 120 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 177
Query: 202 -GLFSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KI DFG+AR + +MAPE + +++++SDV+SFGVLL EI S
Sbjct: 179 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 123 CEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEA 182
C Y + +++L S + + D R ++ D+ M KI+DFG+AR
Sbjct: 155 CAYQVARGMEYLA--SKKCIHRDLAARNVLVT---EDNVM--KIADFGLARDIHHIDYYK 207
Query: 183 NTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
T +MAPE + +++ +SDV+SFGVLL EI +
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 85/200 (42%), Gaps = 41/200 (20%)
Query: 59 LGEGGFGPVYKGVL--NDDKEI--AVKRLSRSSGQG-LQEF--KNLIAK-LQHKNLVRXX 110
+G G FG VY G L ND K+I AVK L+R + G + +F + +I K H N++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 111 XXXXXXX-XXXXICEYMPNKSL--------------DFLLFD-----------STRSVQL 144
+ YM + L D + F S + V
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 157
Query: 145 DWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGT--YGYMAPEYALEG 202
D R C++ D K K++DFG+AR + + N+ +MA E
Sbjct: 158 DLAARNCML-----DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 212
Query: 203 LFSVKSDVFSFGVLLLEIIS 222
F+ KSDV+SFGVLL E+++
Sbjct: 213 KFTTKSDVWSFGVLLWELMT 232
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KI DFG+AR + +MAPE + +++++SDV+SFGVLL EI S
Sbjct: 184 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 107/267 (40%), Gaps = 51/267 (19%)
Query: 59 LGEGGFGPVYKGV-LNDDKEIAVK----RLSRSSGQGLQEFKNLIAKLQHKNLVRXXXXX 113
LG+G +G VY G L++ IA+K R SR S Q L E L L+HKN+V+
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS-QPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 114 XXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC------IING---------IAR 158
E +P SL LL ++ L N + I+ G + R
Sbjct: 75 SENGFIKIFMEQVPGGSLSALL--RSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHR 132
Query: 159 DHKMNP----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGL--FSV 206
D K + KISDFG ++ G T GT YMAPE +G +
Sbjct: 133 DIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEIIDKGPRGYGK 190
Query: 207 KSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFILE 266
+D++S G ++E+ +G+ FY + Q+ + E M K +FIL+
Sbjct: 191 AADIWSLGCTIIEMATGK--PPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAK-AFILK 247
Query: 267 ELLKRIHIGLLCVQEDPADRPTMSSVV 293
C + DP R + ++
Sbjct: 248 -----------CFEPDPDKRACANDLL 263
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 85/200 (42%), Gaps = 41/200 (20%)
Query: 59 LGEGGFGPVYKGVL--NDDKEI--AVKRLSRSSGQG-LQEF--KNLIAK-LQHKNLVRXX 110
+G G FG VY G L ND K+I AVK L+R + G + +F + +I K H N++
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 111 XXXXXXX-XXXXICEYMPNKSL--------------DFLLFD-----------STRSVQL 144
+ YM + L D + F S + V
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 154
Query: 145 DWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGT--YGYMAPEYALEG 202
D R C++ D K K++DFG+AR + + N+ +MA E
Sbjct: 155 DLAARNCML-----DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 209
Query: 203 LFSVKSDVFSFGVLLLEIIS 222
F+ KSDV+SFGVLL E+++
Sbjct: 210 KFTTKSDVWSFGVLLWELMT 229
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 85/200 (42%), Gaps = 41/200 (20%)
Query: 59 LGEGGFGPVYKGVL--NDDKEI--AVKRLSRSSGQG-LQEF--KNLIAK-LQHKNLVRXX 110
+G G FG VY G L ND K+I AVK L+R + G + +F + +I K H N++
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 111 XXXXXXX-XXXXICEYMPNKSL--------------DFLLFD-----------STRSVQL 144
+ YM + L D + F S + V
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 156
Query: 145 DWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGT--YGYMAPEYALEG 202
D R C++ D K K++DFG+AR + + N+ +MA E
Sbjct: 157 DLAARNCML-----DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 211
Query: 203 LFSVKSDVFSFGVLLLEIIS 222
F+ KSDV+SFGVLL E+++
Sbjct: 212 KFTTKSDVWSFGVLLWELMT 231
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KI DFG+AR + +MAPE + +++++SDV+SFGVLL EI S
Sbjct: 225 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGV 215
I + M+ +I+DFG A+V +A N VGT Y++PE E SD+++ G
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 222
Query: 216 LLLEIISG 223
++ ++++G
Sbjct: 223 IIYQLVAG 230
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KI DFG+AR + +MAPE + +++++SDV+SFGVLL EI S
Sbjct: 233 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGV 215
I + M+ +I+DFG A+V +A N VGT Y++PE E SD+++ G
Sbjct: 160 ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGC 219
Query: 216 LLLEIISG 223
++ ++++G
Sbjct: 220 IIYQLVAG 227
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGV 215
I + M+ +I+DFG A+V +A N VGT Y++PE E SD+++ G
Sbjct: 161 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 220
Query: 216 LLLEIISG 223
++ ++++G
Sbjct: 221 IIYQLVAG 228
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGV 215
I + M+ +I+DFG A+V +A N VGT Y++PE E SD+++ G
Sbjct: 161 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 220
Query: 216 LLLEIISG 223
++ ++++G
Sbjct: 221 IIYQLVAG 228
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 85/200 (42%), Gaps = 41/200 (20%)
Query: 59 LGEGGFGPVYKGVL--NDDKEI--AVKRLSRSSGQG-LQEF--KNLIAK-LQHKNLVRXX 110
+G G FG VY G L ND K+I AVK L+R + G + +F + +I K H N++
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 111 XXXXXXX-XXXXICEYMPNKSL--------------DFLLFD-----------STRSVQL 144
+ YM + L D + F S + V
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 175
Query: 145 DWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGT--YGYMAPEYALEG 202
D R C++ D K K++DFG+AR + + N+ +MA E
Sbjct: 176 DLAARNCML-----DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 230
Query: 203 LFSVKSDVFSFGVLLLEIIS 222
F+ KSDV+SFGVLL E+++
Sbjct: 231 KFTTKSDVWSFGVLLWELMT 250
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KI DFG+AR + +MAPE + +++++SDV+SFGVLL EI S
Sbjct: 240 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGV 215
I + M+ +I+DFG A+V +A N VGT Y++PE E SD+++ G
Sbjct: 160 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 219
Query: 216 LLLEIISG 223
++ ++++G
Sbjct: 220 IIYQLVAG 227
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 123 CEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEA 182
C Y + +++L S + + D R ++ D+ M KI+DFG+AR
Sbjct: 196 CAYQVARGMEYLA--SKKCIHRDLAARNVLV---TEDNVM--KIADFGLARDIHHIDYYK 248
Query: 183 NTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
T +MAPE + +++ +SDV+SFGVLL EI +
Sbjct: 249 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGV 215
I + M+ +I+DFG A+V +A N VGT Y++PE E SD+++ G
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 222
Query: 216 LLLEIISG 223
++ ++++G
Sbjct: 223 IIYQLVAG 230
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGV 215
I + M+ +I+DFG A+V +A N VGT Y++PE E SD+++ G
Sbjct: 161 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 220
Query: 216 LLLEIISG 223
++ ++++G
Sbjct: 221 IIYQLVAG 228
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KI DFG+AR + +MAPE + +++++SDV+SFGVLL EI S
Sbjct: 231 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 123 CEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEA 182
C Y + +++L S + + D R ++ ++ M KI+DFG+AR
Sbjct: 162 CTYQLARGMEYLA--SQKCIHRDLAARNVLV---TENNVM--KIADFGLARDINNIDYYK 214
Query: 183 NTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
NT +MAPE + +++ +SDV+SFGVL+ EI +
Sbjct: 215 NTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGV 215
I + M+ +I+DFG A+V +A N VGT Y++PE E SD+++ G
Sbjct: 168 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 227
Query: 216 LLLEIISG 223
++ ++++G
Sbjct: 228 IIYQLVAG 235
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGV 215
I + M+ +I+DFG A+V +A N VGT Y++PE E SD+++ G
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 222
Query: 216 LLLEIISG 223
++ ++++G
Sbjct: 223 IIYQLVAG 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGV 215
I + M+ +I+DFG A+V +A N VGT Y++PE E SD+++ G
Sbjct: 164 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 223
Query: 216 LLLEIISG 223
++ ++++G
Sbjct: 224 IIYQLVAG 231
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 89/227 (39%), Gaps = 49/227 (21%)
Query: 40 LFPLDLIHEATRNFSNENKLGEGGFGPVY----KGVLNDDKE--IAVKRLSRSSGQGLQ- 92
+F D A + +LG+G FG VY KGV+ D+ E +A+K ++ ++ +
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 93 EFKNLIAKLQHKN---LVRXXXXXXXXXXXXXICEYMPNKSLDFLL-------------- 135
EF N + ++ N +VR I E M L L
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 136 --------------------FDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVF 175
++ + V D R C++ A D + KI DFGM R
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFTV--KIGDFGMTRDI 179
Query: 176 GGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+ + +M+PE +G+F+ SDV+SFGV+L EI +
Sbjct: 180 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KI DFG+AR + +MAPE + +++++SDV+SFGVLL EI S
Sbjct: 184 KIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGV 215
I + M+ +I+DFG A+V +A N VGT Y++PE E SD+++ G
Sbjct: 164 ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGC 223
Query: 216 LLLEIISG 223
++ ++++G
Sbjct: 224 IIYQLVAG 231
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGV 215
I + M+ +I+DFG A+V +A N VGT Y++PE E SD+++ G
Sbjct: 161 ILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGC 220
Query: 216 LLLEIISG 223
++ ++++G
Sbjct: 221 IIYQLVAG 228
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 81/194 (41%), Gaps = 34/194 (17%)
Query: 59 LGEGGFGPVYKGVLN-DDKEIAVKRLSRSSGQG------LQEFKNLIAKLQHKNLVRXXX 111
LG+G FG V K +E AVK ++++S + L+E + L+ KL H N+++
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVE-LLKKLDHPNIMKLFE 88
Query: 112 XXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRM-CIINGIARDHKMNP------ 164
+ E L + R + D R + + +GI HK N
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLK 148
Query: 165 ---------------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSD 209
KI DFG++ F Q +GT Y+APE L G + K D
Sbjct: 149 PENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPE-VLRGTYDEKCD 204
Query: 210 VFSFGVLLLEIISG 223
V+S GV+L ++SG
Sbjct: 205 VWSAGVILYILLSG 218
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGV 215
I + M+ +I+DFG A+V +A N VGT Y++PE E SD+++ G
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 222
Query: 216 LLLEIISG 223
++ ++++G
Sbjct: 223 IIYQLVAG 230
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 86/218 (39%), Gaps = 49/218 (22%)
Query: 49 ATRNFSNENKLGEGGFGPVY----KGVLNDDKE--IAVKRLSRSSGQGLQ-EFKNLIAKL 101
A + +LG+G FG VY KGV+ D+ E +A+K ++ ++ + EF N + +
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 102 QHKN---LVRXXXXXXXXXXXXXICEYMPNKSLDFLL----------------------- 135
+ N +VR I E M L L
Sbjct: 76 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 135
Query: 136 -----------FDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANT 184
++ + V D R C++ A D + KI DFGM R
Sbjct: 136 MAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFTV--KIGDFGMTRDIYETDYYRKG 190
Query: 185 NRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+ + +M+PE +G+F+ SDV+SFGV+L EI +
Sbjct: 191 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGV 215
I + M+ +I+DFG A+V +A N VGT Y++PE E SD+++ G
Sbjct: 166 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 225
Query: 216 LLLEIISG 223
++ ++++G
Sbjct: 226 IIYQLVAG 233
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 86/218 (39%), Gaps = 49/218 (22%)
Query: 49 ATRNFSNENKLGEGGFGPVY----KGVLNDDKE--IAVKRLSRSSGQGLQ-EFKNLIAKL 101
A + +LG+G FG VY KGV+ D+ E +A+K ++ ++ + EF N + +
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 102 QHKN---LVRXXXXXXXXXXXXXICEYMPNKSLDFLL----------------------- 135
+ N +VR I E M L L
Sbjct: 83 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 142
Query: 136 -----------FDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANT 184
++ + V D R C++ A D + KI DFGM R
Sbjct: 143 MAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFTV--KIGDFGMTRDIYETDYYRKG 197
Query: 185 NRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+ + +M+PE +G+F+ SDV+SFGV+L EI +
Sbjct: 198 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 86/218 (39%), Gaps = 49/218 (22%)
Query: 49 ATRNFSNENKLGEGGFGPVY----KGVLNDDKE--IAVKRLSRSSGQGLQ-EFKNLIAKL 101
A + +LG+G FG VY KGV+ D+ E +A+K ++ ++ + EF N + +
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 102 QHKN---LVRXXXXXXXXXXXXXICEYMPNKSLDFLL----------------------- 135
+ N +VR I E M L L
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 129
Query: 136 -----------FDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANT 184
++ + V D R C++ A D + KI DFGM R
Sbjct: 130 MAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFTV--KIGDFGMTRDIYETDYYRKG 184
Query: 185 NRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+ + +M+PE +G+F+ SDV+SFGV+L EI +
Sbjct: 185 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 86/218 (39%), Gaps = 49/218 (22%)
Query: 49 ATRNFSNENKLGEGGFGPVY----KGVLNDDKE--IAVKRLSRSSGQGLQ-EFKNLIAKL 101
A + +LG+G FG VY KGV+ D+ E +A+K ++ ++ + EF N + +
Sbjct: 13 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 72
Query: 102 QHKN---LVRXXXXXXXXXXXXXICEYMPNKSLDFLL----------------------- 135
+ N +VR I E M L L
Sbjct: 73 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 132
Query: 136 -----------FDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANT 184
++ + V D R C++ A D + KI DFGM R
Sbjct: 133 MAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFTV--KIGDFGMTRDIYETDYYRKG 187
Query: 185 NRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+ + +M+PE +G+F+ SDV+SFGV+L EI +
Sbjct: 188 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGV 215
I + M+ +I+DFG A+V +A N VGT Y++PE E SD+++ G
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGC 222
Query: 216 LLLEIISG 223
++ ++++G
Sbjct: 223 IIYQLVAG 230
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 86/204 (42%), Gaps = 31/204 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAKL 101
+ NF K+GEG +G VYK E +A+K++ + ++E +L+ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKEL 61
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARD 159
H N+V+ + E++ DF+ + + L + ++ G+A
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 160 HK-------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
H + P K++DFG+AR F G + VV T Y APE L
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 179
Query: 202 -GLFSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 86/218 (39%), Gaps = 49/218 (22%)
Query: 49 ATRNFSNENKLGEGGFGPVY----KGVLNDDKE--IAVKRLSRSSGQGLQ-EFKNLIAKL 101
A + +LG+G FG VY KGV+ D+ E +A+K ++ ++ + EF N + +
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 102 QHKN---LVRXXXXXXXXXXXXXICEYMPNKSLDFLL----------------------- 135
+ N +VR I E M L L
Sbjct: 83 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 142
Query: 136 -----------FDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANT 184
++ + V D R C++ A D + KI DFGM R
Sbjct: 143 MAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFTV--KIGDFGMTRDIYETDYYRKG 197
Query: 185 NRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+ + +M+PE +G+F+ SDV+SFGV+L EI +
Sbjct: 198 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 86/195 (44%), Gaps = 27/195 (13%)
Query: 53 FSNENKLGEGGFGPVYKGVLN-DDKEIAVKRLS----RSSGQGLQEFKNLIAKLQHKNLV 107
F+ K+G+G FG V+KG+ N K +A+K + + +Q+ ++++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 108 RXXXXXXXXXXXXXICEYMPNKS-LDFL---LFDSTRSVQ--------LDW-------NR 148
+ I EY+ S LD L D T+ LD+ +R
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHR 128
Query: 149 RMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKS 208
+ N + +H K++DFG+A Q + NT VGT +MAPE + + K+
Sbjct: 129 DIKAANVLLSEHG-EVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQSAYDSKA 185
Query: 209 DVFSFGVLLLEIISG 223
D++S G+ +E+ G
Sbjct: 186 DIWSLGITAIELARG 200
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 86/218 (39%), Gaps = 49/218 (22%)
Query: 49 ATRNFSNENKLGEGGFGPVY----KGVLNDDKE--IAVKRLSRSSGQGLQ-EFKNLIAKL 101
A + +LG+G FG VY KGV+ D+ E +A+K ++ ++ + EF N + +
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 102 QHKN---LVRXXXXXXXXXXXXXICEYMPNKSLDFLL----------------------- 135
+ N +VR I E M L L
Sbjct: 76 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 135
Query: 136 -----------FDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANT 184
++ + V D R C++ A D + KI DFGM R
Sbjct: 136 MAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFTV--KIGDFGMTRDIYETDYYRKG 190
Query: 185 NRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+ + +M+PE +G+F+ SDV+SFGV+L EI +
Sbjct: 191 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 31/201 (15%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAKLQHK 104
NF K+GEG +G VYK E +A+K++ + ++E +L+ +L H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKELNHP 61
Query: 105 NLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARDHK- 161
N+V+ + E++ F+ + + L + ++ G+A H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 162 ------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE-GL 203
+ P K++DFG+AR F G T+ VV T Y APE L
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEILLGCKY 179
Query: 204 FSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRR 200
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 31/201 (15%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAKLQHK 104
NF K+GEG +G VYK E +A+K++ + ++E +L+ +L H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKELNHP 62
Query: 105 NLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARDHK- 161
N+V+ + E++ F+ + + L + ++ G+A H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 162 ------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE-GL 203
+ P K++DFG+AR F G T+ VV T Y APE L
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEILLGCKY 180
Query: 204 FSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRR 201
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDK-EIAVKRLSRSSGQG-----LQEFKNLIAKLQHKNL 106
++N + +GEG +G V N +K +A+K++S Q L+E K L+ + +H+N+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL-RFRHENI 83
Query: 107 VRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC-----IINGIARDHK 161
+ Y+ ++ L+ ++ L N +C I+ G+ H
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICYFLYQILRGLKYIHS 142
Query: 162 MNP------------------KISDFGMARVFGGNQSEAN-TNRVVGTYGYMAPEYALEG 202
N KI DFG+ARV + V T Y APE L
Sbjct: 143 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 203 LFSVKS-DVFSFGVLLLEIISGR 224
KS D++S G +L E++S R
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 31/201 (15%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAKLQHK 104
NF K+GEG +G VYK E +A+K++ + ++E +L+ +L H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKELNHP 61
Query: 105 NLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARDHK- 161
N+V+ + E++ F+ + + L + ++ G+A H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 162 ------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE-GL 203
+ P K++DFG+AR F G T+ VV T Y APE L
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEILLGCKY 179
Query: 204 FSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRR 200
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDK-EIAVKRLSRSSGQG-----LQEFKNLIAKLQHKNL 106
++N + +GEG +G V N +K +A+K++S Q L+E K L+ + +H+N+
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL-RFRHENI 85
Query: 107 VRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC-----IINGIARDHK 161
+ Y+ ++ L+ ++ L N +C I+ G+ H
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICYFLYQILRGLKYIHS 144
Query: 162 MNP------------------KISDFGMARVFGGNQSEAN-TNRVVGTYGYMAPEYALEG 202
N KI DFG+ARV + V T Y APE L
Sbjct: 145 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 203 LFSVKS-DVFSFGVLLLEIISGR 224
KS D++S G +L E++S R
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDK-EIAVKRLSRSSGQG-----LQEFKNLIAKLQHKNL 106
++N + +GEG +G V N +K +A+K++S Q L+E K L+ + +H+N+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL-RFRHENI 83
Query: 107 VRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC-----IINGIARDHK 161
+ Y+ ++ L+ ++ L N +C I+ G+ H
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICYFLYQILRGLKYIHS 142
Query: 162 MNP------------------KISDFGMARVFGGNQSEAN-TNRVVGTYGYMAPEYALEG 202
N KI DFG+ARV + V T Y APE L
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 203 LFSVKS-DVFSFGVLLLEIISGR 224
KS D++S G +L E++S R
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 86/204 (42%), Gaps = 31/204 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAKL 101
+ NF K+GEG +G VYK E +A+K++ + ++E +L+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKEL 62
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARD 159
H N+V+ + E++ DF+ + + L + ++ G+A
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 160 HK-------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
H + P K++DFG+AR F G + VV T Y APE L
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 180
Query: 202 -GLFSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDK-EIAVKRLSRSSGQG-----LQEFKNLIAKLQHKNL 106
++N + +GEG +G V N +K +A+K++S Q L+E K L+ + +H+N+
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL-RFRHENI 91
Query: 107 VRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC-----IINGIARDHK 161
+ Y+ ++ L+ ++ L N +C I+ G+ H
Sbjct: 92 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICYFLYQILRGLKYIHS 150
Query: 162 MNP------------------KISDFGMARVFGGNQSEAN-TNRVVGTYGYMAPEYALEG 202
N KI DFG+ARV + V T Y APE L
Sbjct: 151 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 210
Query: 203 LFSVKS-DVFSFGVLLLEIISGR 224
KS D++S G +L E++S R
Sbjct: 211 KGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDK-EIAVKRLSRSSGQG-----LQEFKNLIAKLQHKNL 106
++N + +GEG +G V N +K +A+K++S Q L+E K L+ + +H+N+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL-RFRHENI 83
Query: 107 VRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC-----IINGIARDHK 161
+ Y+ ++ L+ ++ L N +C I+ G+ H
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICYFLYQILRGLKYIHS 142
Query: 162 MNP------------------KISDFGMARVFGGNQSEAN-TNRVVGTYGYMAPEYALEG 202
N KI DFG+ARV + V T Y APE L
Sbjct: 143 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 203 LFSVKS-DVFSFGVLLLEIISGR 224
KS D++S G +L E++S R
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 31/201 (15%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAKLQHK 104
NF K+GEG +G VYK E +A+K++ + ++E +L+ +L H
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKELNHP 63
Query: 105 NLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARDHK- 161
N+V+ + E++ F+ + + L + ++ G+A H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 162 ------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE-GL 203
+ P K++DFG+AR F G T+ VV T Y APE L
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEILLGCKY 181
Query: 204 FSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRR 202
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDK-EIAVKRLSRSSGQG-----LQEFKNLIAKLQHKNL 106
++N + +GEG +G V N +K +A+K++S Q L+E K L+ + +H+N+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL-RFRHENI 83
Query: 107 VRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC-----IINGIARDHK 161
+ Y+ ++ L+ ++ L N +C I+ G+ H
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICYFLYQILRGLKYIHS 142
Query: 162 MNP------------------KISDFGMARVFGGNQSEAN-TNRVVGTYGYMAPEYALEG 202
N KI DFG+ARV + V T Y APE L
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 203 LFSVKS-DVFSFGVLLLEIISGR 224
KS D++S G +L E++S R
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 31/201 (15%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAKLQHK 104
NF K+GEG +G VYK E +A+K++ + ++E +L+ +L H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKELNHP 62
Query: 105 NLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARDHK- 161
N+V+ + E++ F+ + + L + ++ G+A H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 162 ------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE-GL 203
+ P K++DFG+AR F G T+ VV T Y APE L
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEILLGCKY 180
Query: 204 FSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRR 201
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDK-EIAVKRLSRSSGQG-----LQEFKNLIAKLQHKNL 106
++N + +GEG +G V N +K +A+K++S Q L+E K L+ + +H+N+
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL-RFRHENI 103
Query: 107 VRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC-----IINGIARDHK 161
+ Y+ ++ L+ ++ L N +C I+ G+ H
Sbjct: 104 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICYFLYQILRGLKYIHS 162
Query: 162 MNP------------------KISDFGMARVFGGNQSEAN-TNRVVGTYGYMAPEYALEG 202
N KI DFG+ARV + V T Y APE L
Sbjct: 163 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 222
Query: 203 LFSVKS-DVFSFGVLLLEIISGR 224
KS D++S G +L E++S R
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 86/218 (39%), Gaps = 49/218 (22%)
Query: 49 ATRNFSNENKLGEGGFGPVY----KGVLNDDKE--IAVKRLSRSSGQGLQ-EFKNLIAKL 101
A + +LG+G FG VY KGV+ D+ E +A+K ++ ++ + EF N + +
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 102 QHKN---LVRXXXXXXXXXXXXXICEYMPNKSLDFLL----------------------- 135
+ N +VR I E M L L
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 136
Query: 136 -----------FDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANT 184
++ + V D R C++ A D + KI DFGM R
Sbjct: 137 MAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFTV--KIGDFGMTRDIYETDYYRKG 191
Query: 185 NRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+ + +M+PE +G+F+ SDV+SFGV+L EI +
Sbjct: 192 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 27/196 (13%)
Query: 53 FSNENKLGEGGFGPVYKGVLN-DDKEIAVKRLS----RSSGQGLQEFKNLIAKLQHKNLV 107
F+ K+G+G FG V+KG+ N K +A+K + + +Q+ ++++ +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 108 RXXXXXXXXXXXXXICEYMPNKS-LDFL---LFDSTRSVQ--------LDW-------NR 148
+ I EY+ S LD L D T+ LD+ +R
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHR 148
Query: 149 RMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKS 208
+ N + +H K++DFG+A Q + NT VGT +MAPE + + K+
Sbjct: 149 DIKAANVLLSEHG-EVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQSAYDSKA 205
Query: 209 DVFSFGVLLLEIISGR 224
D++S G+ +E+ G
Sbjct: 206 DIWSLGITAIELARGE 221
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDK-EIAVKRLSRSSGQG-----LQEFKNLIAKLQHKNL 106
++N + +GEG +G V N +K +A+K++S Q L+E K L+ + +H+N+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL-RFRHENI 83
Query: 107 VRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC-----IINGIARDHK 161
+ Y+ ++ L+ ++ L N +C I+ G+ H
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICYFLYQILRGLKYIHS 142
Query: 162 MNP------------------KISDFGMARVFGGNQSEAN-TNRVVGTYGYMAPEYALEG 202
N KI DFG+ARV + V T Y APE L
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 203 LFSVKS-DVFSFGVLLLEIISGR 224
KS D++S G +L E++S R
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 31/201 (15%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAKLQHK 104
NF K+GEG +G VYK E +A+K++ + ++E +L+ +L H
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKELNHP 66
Query: 105 NLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARDHK- 161
N+V+ + E++ F+ + + L + ++ G+A H
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 162 ------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE-GL 203
+ P K++DFG+AR F G T+ VV T Y APE L
Sbjct: 127 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEILLGCKY 184
Query: 204 FSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 185 YSTAVDIWSLGCIFAEMVTRR 205
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDK-EIAVKRLSRSSGQG-----LQEFKNLIAKLQHKNL 106
++N + +GEG +G V N +K +A+K++S Q L+E K L+ + +H+N+
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL-RFRHENI 88
Query: 107 VRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC-----IINGIARDHK 161
+ Y+ ++ L+ ++ L N +C I+ G+ H
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICYFLYQILRGLKYIHS 147
Query: 162 MNP------------------KISDFGMARVFGGNQSEAN-TNRVVGTYGYMAPEYALEG 202
N KI DFG+ARV + V T Y APE L
Sbjct: 148 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 207
Query: 203 LFSVKS-DVFSFGVLLLEIISGR 224
KS D++S G +L E++S R
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDK-EIAVKRLSRSSGQG-----LQEFKNLIAKLQHKNL 106
++N + +GEG +G V N +K +A+K++S Q L+E K L+ + +H+N+
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL-RFRHENI 89
Query: 107 VRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC-----IINGIARDHK 161
+ Y+ ++ L+ ++ L N +C I+ G+ H
Sbjct: 90 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICYFLYQILRGLKYIHS 148
Query: 162 MNP------------------KISDFGMARVFGGNQSEAN-TNRVVGTYGYMAPEYALEG 202
N KI DFG+ARV + V T Y APE L
Sbjct: 149 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 208
Query: 203 LFSVKS-DVFSFGVLLLEIISGR 224
KS D++S G +L E++S R
Sbjct: 209 KGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDK-EIAVKRLSRSSGQG-----LQEFKNLIAKLQHKNL 106
++N + +GEG +G V N +K +A+K++S Q L+E K L+ + +H+N+
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL-RFRHENI 80
Query: 107 VRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC-----IINGIARDHK 161
+ Y+ ++ L+ ++ L N +C I+ G+ H
Sbjct: 81 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICYFLYQILRGLKYIHS 139
Query: 162 MNP------------------KISDFGMARVFGGNQSEAN-TNRVVGTYGYMAPEYALEG 202
N KI DFG+ARV + V T Y APE L
Sbjct: 140 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 199
Query: 203 LFSVKS-DVFSFGVLLLEIISGR 224
KS D++S G +L E++S R
Sbjct: 200 KGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDK-EIAVKRLSRSSGQG-----LQEFKNLIAKLQHKNL 106
++N + +GEG +G V N +K +A+K++S Q L+E K L+ + +H+N+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL-RFRHENI 87
Query: 107 VRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC-----IINGIARDHK 161
+ Y+ ++ L+ ++ L N +C I+ G+ H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICYFLYQILRGLKYIHS 146
Query: 162 MNP------------------KISDFGMARVFGGNQSEAN-TNRVVGTYGYMAPEYALEG 202
N KI DFG+ARV + V T Y APE L
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 203 LFSVKS-DVFSFGVLLLEIISGR 224
KS D++S G +L E++S R
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDK-EIAVKRLSRSSGQG-----LQEFKNLIAKLQHKNL 106
++N + +GEG +G V N +K +A+K++S Q L+E K L+ + +H+N+
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL-RFRHENI 81
Query: 107 VRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC-----IINGIARDHK 161
+ Y+ ++ L+ ++ L N +C I+ G+ H
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICYFLYQILRGLKYIHS 140
Query: 162 MNP------------------KISDFGMARVFGGNQSEAN-TNRVVGTYGYMAPEYALEG 202
N KI DFG+ARV + V T Y APE L
Sbjct: 141 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 203 LFSVKS-DVFSFGVLLLEIISGR 224
KS D++S G +L E++S R
Sbjct: 201 KGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGL-FSVKSDVFSFG 214
I D + +ISD G+A F + A+ VGT+GYMAPE +G+ + +D FS G
Sbjct: 323 ILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLG 378
Query: 215 VLLLEIISGRKDTR 228
+L +++ G R
Sbjct: 379 CMLFKLLRGHSPFR 392
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGL-FSVKSDVFSFG 214
I D + +ISD G+A F + A+ VGT+GYMAPE +G+ + +D FS G
Sbjct: 323 ILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLG 378
Query: 215 VLLLEIISGRKDTR 228
+L +++ G R
Sbjct: 379 CMLFKLLRGHSPFR 392
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 86/218 (39%), Gaps = 49/218 (22%)
Query: 49 ATRNFSNENKLGEGGFGPVY----KGVLNDDKE--IAVKRLSRSSGQGLQ-EFKN---LI 98
A + +LG+G FG VY KGV+ D+ E +A+K ++ ++ + EF N ++
Sbjct: 45 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 104
Query: 99 AKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLL----------------------- 135
+ ++VR I E M L L
Sbjct: 105 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 164
Query: 136 -----------FDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANT 184
++ + V D R C++ A D + KI DFGM R
Sbjct: 165 MAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFTV--KIGDFGMTRDIYETDYYRKG 219
Query: 185 NRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+ + +M+PE +G+F+ SDV+SFGV+L EI +
Sbjct: 220 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDK-EIAVKRLSRSSGQG-----LQEFKNLIAKLQHKNL 106
++N + +GEG +G V N +K +A+K++S Q L+E K L+ + +H+N+
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL-RFRHENI 81
Query: 107 VRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC-----IINGIARDHK 161
+ Y+ ++ L+ ++ L N +C I+ G+ H
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICYFLYQILRGLKYIHS 140
Query: 162 MNP------------------KISDFGMARVFGGNQSEAN-TNRVVGTYGYMAPEYALEG 202
N KI DFG+ARV + V T Y APE L
Sbjct: 141 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 203 LFSVKS-DVFSFGVLLLEIISGR 224
KS D++S G +L E++S R
Sbjct: 201 KGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 38/204 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-----IAVKRL----SRSSGQGLQEFKNLIAKLQ 102
F LG G FG VYKG+ + E +A+K L S + + + + ++A +
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 103 HKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ--------LDW-------- 146
+ ++ R I + MP L D R + L+W
Sbjct: 73 NPHVCRLLGICLTSTVQL-ITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAEGM 127
Query: 147 ----NRRMCIINGIARD----HKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEY 198
+RR+ + AR+ + KI+DFG+A++ G + E + +MA E
Sbjct: 128 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 187
Query: 199 ALEGLFSVKSDVFSFGVLLLEIIS 222
L +++ +SDV+S+GV + E+++
Sbjct: 188 ILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 38/204 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-----IAVKRL----SRSSGQGLQEFKNLIAKLQ 102
F LG G FG VYKG+ + E +A+K L S + + + + ++A +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 103 HKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ--------LDW-------- 146
+ ++ R I + MP L D R + L+W
Sbjct: 76 NPHVCRLLGICLTSTVQL-ITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGM 130
Query: 147 ----NRRMCIINGIARD----HKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEY 198
+RR+ + AR+ + KI+DFG+A++ G + E + +MA E
Sbjct: 131 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 199 ALEGLFSVKSDVFSFGVLLLEIIS 222
L +++ +SDV+S+GV + E+++
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDK-EIAVKRLSRSSGQG-----LQEFKNLIAKLQHKNL 106
++N + +GEG +G V N +K +A+K++S Q L+E K L+ + +H+N+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL-RFRHENI 87
Query: 107 VRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC-----IINGIARDHK 161
+ Y+ ++ L+ ++ L N +C I+ G+ H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICYFLYQILRGLKYIHS 146
Query: 162 MNP------------------KISDFGMARVFGGNQSEAN-TNRVVGTYGYMAPEYALEG 202
N KI DFG+ARV + V T Y APE L
Sbjct: 147 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 203 LFSVKS-DVFSFGVLLLEIISGR 224
KS D++S G +L E++S R
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGL-FSVKSDVFSFG 214
I D + +ISD G+A F + A+ VGT+GYMAPE +G+ + +D FS G
Sbjct: 322 ILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLG 377
Query: 215 VLLLEIISGRKDTR 228
+L +++ G R
Sbjct: 378 CMLFKLLRGHSPFR 391
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGL-FSVKSDVFSFG 214
I D + +ISD G+A F + A+ VGT+GYMAPE +G+ + +D FS G
Sbjct: 323 ILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLG 378
Query: 215 VLLLEIISGRKDTR 228
+L +++ G R
Sbjct: 379 CMLFKLLRGHSPFR 392
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 38/204 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-----IAVKRL----SRSSGQGLQEFKNLIAKLQ 102
F LG G FG VYKG+ + E +A+K L S + + + + ++A +
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 103 HKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ--------LDW-------- 146
+ ++ R I + MP L D R + L+W
Sbjct: 86 NPHVCRLLGICLTSTVQL-ITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGM 140
Query: 147 ----NRRMCIINGIARD----HKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEY 198
+RR+ + AR+ + KI+DFG+A++ G + E + +MA E
Sbjct: 141 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 200
Query: 199 ALEGLFSVKSDVFSFGVLLLEIIS 222
L +++ +SDV+S+GV + E+++
Sbjct: 201 ILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 38/204 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-----IAVKRL----SRSSGQGLQEFKNLIAKLQ 102
F LG G FG VYKG+ + E +A+K L S + + + + ++A +
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 103 HKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ--------LDW-------- 146
+ ++ R I + MP L D R + L+W
Sbjct: 70 NPHVCRLLGICLTSTVQL-ITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGM 124
Query: 147 ----NRRMCIINGIARD----HKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEY 198
+RR+ + AR+ + KI+DFG+A++ G + E + +MA E
Sbjct: 125 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 184
Query: 199 ALEGLFSVKSDVFSFGVLLLEIIS 222
L +++ +SDV+S+GV + E+++
Sbjct: 185 ILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 38/204 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-----IAVKRL----SRSSGQGLQEFKNLIAKLQ 102
F LG G FG VYKG+ + E +A+K L S + + + + ++A +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 103 HKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ--------LDW-------- 146
+ ++ R I + MP L D R + L+W
Sbjct: 76 NPHVCRLLGICLTSTVQL-ITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGM 130
Query: 147 ----NRRMCIINGIARD----HKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEY 198
+RR+ + AR+ + KI+DFG+A++ G + E + +MA E
Sbjct: 131 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 199 ALEGLFSVKSDVFSFGVLLLEIIS 222
L +++ +SDV+S+GV + E+++
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 38/204 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-----IAVKRL----SRSSGQGLQEFKNLIAKLQ 102
F LG G FG VYKG+ + E +A+K L S + + + + ++A +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 103 HKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ--------LDW-------- 146
+ ++ R I + MP L D R + L+W
Sbjct: 76 NPHVCRLLGICLTSTVQL-ITQLMPFGXL----LDYVREHKDNIGSQYLLNWCVQIAKGM 130
Query: 147 ----NRRMCIINGIARD----HKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEY 198
+RR+ + AR+ + KI+DFG+A++ G + E + +MA E
Sbjct: 131 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 199 ALEGLFSVKSDVFSFGVLLLEIIS 222
L +++ +SDV+S+GV + E+++
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 38/204 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-----IAVKRL----SRSSGQGLQEFKNLIAKLQ 102
F LG G FG VYKG+ + E +A+K L S + + + + ++A +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 103 HKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ--------LDW-------- 146
+ ++ R I + MP L D R + L+W
Sbjct: 79 NPHVCRLLGICLTSTVQL-ITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGM 133
Query: 147 ----NRRMCIINGIARD----HKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEY 198
+RR+ + AR+ + KI+DFG+A++ G + E + +MA E
Sbjct: 134 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 199 ALEGLFSVKSDVFSFGVLLLEIIS 222
L +++ +SDV+S+GV + E+++
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDK-EIAVKRLSRSSGQG-----LQEFKNLIAKLQHKNL 106
++N + +GEG +G V N +K +A+K++S Q L+E K L+ + +H+N+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILL-RFRHENI 87
Query: 107 VRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC-----IINGIARDHK 161
+ Y+ ++ L+ ++ L N +C I+ G+ H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICYFLYQILRGLKYIHS 146
Query: 162 MNP------------------KISDFGMARVFGGNQSEAN-TNRVVGTYGYMAPEYALEG 202
N KI DFG+ARV + V T Y APE L
Sbjct: 147 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 203 LFSVKS-DVFSFGVLLLEIISGR 224
KS D++S G +L E++S R
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 91/218 (41%), Gaps = 43/218 (19%)
Query: 42 PLDLIHEATRNFSNENK----LGEGGFGPVYKGVLNDDK----EIAVKRLSR------SS 87
P + +T FS+ K LG+G FG V +L DK E AVK +S+ +
Sbjct: 13 PGMFVQHSTAIFSDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTD 69
Query: 88 GQGLQEFKNLIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWN 147
+ L L+ +L H N+++ + E L + R ++D
Sbjct: 70 KESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA 129
Query: 148 RRM-CIINGIARDHK---------------------MNPKISDFGMARVFGGNQSEANTN 185
R + +++GI HK N +I DFG++ F ++ +
Sbjct: 130 RIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK- 188
Query: 186 RVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+GT Y+APE L G + K DV+S GV+L ++SG
Sbjct: 189 --IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 38/203 (18%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDKE-----IAVKRL----SRSSGQGLQEFKNLIAKLQH 103
F LG G FG VYKG+ + E +A+K L S + + + + ++A + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 104 KNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ--------LDW--------- 146
++ R I + MP L D R + L+W
Sbjct: 79 PHVCRLLGICLTSTVQL-ITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMN 133
Query: 147 ---NRRMCIINGIARD----HKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYA 199
+RR+ + AR+ + KI+DFG+A++ G + E + +MA E
Sbjct: 134 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 200 LEGLFSVKSDVFSFGVLLLEIIS 222
L +++ +SDV+S+GV + E+++
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 85/218 (38%), Gaps = 49/218 (22%)
Query: 49 ATRNFSNENKLGEGGFGPVY----KGVLNDDKE--IAVKRLSRSSGQGLQ-EFKNLIAKL 101
A + +LG+G FG VY KGV+ D+ E +A+K ++ ++ + EF N + +
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 102 QHKN---LVRXXXXXXXXXXXXXICEYMPNKSLDFLL----------------------- 135
+ N +VR I E M L L
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 129
Query: 136 -----------FDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANT 184
++ + V D R C + A D + KI DFGM R
Sbjct: 130 MAGEIADGMAYLNANKFVHRDLAARNCXV---AEDFTV--KIGDFGMTRDIYETDYYRKG 184
Query: 185 NRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+ + +M+PE +G+F+ SDV+SFGV+L EI +
Sbjct: 185 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 39/227 (17%)
Query: 29 GKKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKGVLNDDKE-----IAVKRL 83
G + S E P L I + T F LG G FG VYKG+ + E +A+K L
Sbjct: 1 GAMGIRSGEAPNQALLRILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL 59
Query: 84 ----SRSSGQGLQEFKNLIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDST 139
S + + + + ++A + + ++ R I + MP L D
Sbjct: 60 REATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCL----LDYV 114
Query: 140 RSVQ--------LDW------------NRRMCIINGIARD----HKMNPKISDFGMARVF 175
R + L+W +RR+ + AR+ + KI+DFG+A++
Sbjct: 115 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 174
Query: 176 GGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
G + E + +MA E L +++ +SDV+S+GV + E+++
Sbjct: 175 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 38/204 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-----IAVKRL----SRSSGQGLQEFKNLIAKLQ 102
F LG G FG VYKG+ + E +A+K L S + + + + ++A +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 103 HKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ--------LDW-------- 146
+ ++ R I + MP L D R + L+W
Sbjct: 79 NPHVCRLLGICLTSTVQL-ITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGM 133
Query: 147 ----NRRMCIINGIARD----HKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEY 198
+RR+ + AR+ + KI+DFG+A++ G + E + +MA E
Sbjct: 134 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 199 ALEGLFSVKSDVFSFGVLLLEIIS 222
L +++ +SDV+S+GV + E+++
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 31/201 (15%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAKLQHK 104
NF K+GEG +G VYK E +A+K++ + ++E +L+ +L H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKELNHP 61
Query: 105 NLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARDHK- 161
N+V+ + E++ F+ + + L + ++ G+A H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 162 ------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE-GL 203
+ P K++DFG+AR F G T+ VV T Y APE L
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEILLGCKY 179
Query: 204 FSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRR 200
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 38/204 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-----IAVKRL----SRSSGQGLQEFKNLIAKLQ 102
F LG G FG VYKG+ + E +A+K L S + + + + ++A +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 103 HKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ--------LDW-------- 146
+ ++ R I + MP L D R + L+W
Sbjct: 79 NPHVCRLLGICLTSTVQL-ITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGM 133
Query: 147 ----NRRMCIINGIARD----HKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEY 198
+RR+ + AR+ + KI+DFG+A++ G + E + +MA E
Sbjct: 134 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 199 ALEGLFSVKSDVFSFGVLLLEIIS 222
L +++ +SDV+S+GV + E+++
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 38/203 (18%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDKE-----IAVKRL----SRSSGQGLQEFKNLIAKLQH 103
F LG G FG VYKG+ + E +A+K L S + + + + ++A + +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 104 KNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ--------LDW--------- 146
++ R I + MP L D R + L+W
Sbjct: 83 PHVCRLLGICLTSTVQL-ITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMN 137
Query: 147 ---NRRMCIINGIARD----HKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYA 199
+RR+ + AR+ + KI+DFG+A++ G + E + +MA E
Sbjct: 138 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 197
Query: 200 LEGLFSVKSDVFSFGVLLLEIIS 222
L +++ +SDV+S+GV + E+++
Sbjct: 198 LHRIYTHQSDVWSYGVTVWELMT 220
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 85/215 (39%), Gaps = 34/215 (15%)
Query: 42 PLDLIHEATRNFSN-----ENKLGEGGFGPVYKGVLN----DDKEIAVKRLSRS-SGQGL 91
P +HE + E +G G FG V G L + +A+K L + +
Sbjct: 8 PNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQR 67
Query: 92 QEF---KNLIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLL------FDSTRSV 142
++F +++ + H N++ + EYM N SLD L F + V
Sbjct: 68 RDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLV 127
Query: 143 --------------QLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVV 188
+ + R I + + K+SDFG++RV + A T R
Sbjct: 128 GMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 187
Query: 189 GT-YGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+ APE F+ SDV+S+G+++ E++S
Sbjct: 188 KIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 38/204 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-----IAVKRL----SRSSGQGLQEFKNLIAKLQ 102
F LG G FG VYKG+ + E +A+K L S + + + + ++A +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 103 HKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ--------LDW-------- 146
+ ++ R I + MP L D R + L+W
Sbjct: 77 NPHVCRLLGICLTSTVQL-IMQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGM 131
Query: 147 ----NRRMCIINGIARD----HKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEY 198
+RR+ + AR+ + KI+DFG+A++ G + E + +MA E
Sbjct: 132 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 191
Query: 199 ALEGLFSVKSDVFSFGVLLLEIIS 222
L +++ +SDV+S+GV + E+++
Sbjct: 192 ILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDK-EIAVKRLSRSSGQG-----LQEFKNLIAKLQHKNL 106
++N + +GEG +G V N +K +A+K++S Q L+E K L+ + +H+N+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL-RFRHENI 87
Query: 107 VRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC-----IINGIARDHK 161
+ Y+ ++ L+ ++ L N +C I+ G+ H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICYFLYQILRGLKYIHS 146
Query: 162 MNP------------------KISDFGMARVFGGNQSEAN-TNRVVGTYGYMAPEYALEG 202
N KI DFG+ARV + V T Y APE L
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 206
Query: 203 LFSVKS-DVFSFGVLLLEIISGR 224
KS D++S G +L E++S R
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDK-EIAVKRLSRSSGQG-----LQEFKNLIAKLQHKNL 106
++N + +GEG +G V N +K +A+K++S Q L+E K L+ + +H+N+
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL-RFRHENI 88
Query: 107 VRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC-----IINGIARDHK 161
+ Y+ ++ L+ ++ L N +C I+ G+ H
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICYFLYQILRGLKYIHS 147
Query: 162 MNP------------------KISDFGMARVFGGNQSEAN-TNRVVGTYGYMAPEYALEG 202
N KI DFG+ARV + V T Y APE L
Sbjct: 148 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 207
Query: 203 LFSVKS-DVFSFGVLLLEIISGR 224
KS D++S G +L E++S R
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNR 230
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 118/290 (40%), Gaps = 66/290 (22%)
Query: 51 RNFSNENKLGEGGFGPV----YKGV-LNDDKEIAVKRLSRSSGQGLQEFKNLIAKLQ--H 103
R+ ++LG+G FG V Y + N +AVK+L S ++F+ I L+ H
Sbjct: 7 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 66
Query: 104 KNLV---RXXXXXXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNR----------- 148
+ + R + EY+P+ L DFL R LD +R
Sbjct: 67 SDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKG 123
Query: 149 ------RMCIINGIAR-----DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYG--YMA 195
R C+ +A + + + KI+DFG+A++ ++ + R G + A
Sbjct: 124 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK-DXXVVREPGQSPIFWYA 182
Query: 196 PEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCEGN----- 250
PE + +FS +SDV+SFGV+L E+ + Y + + + CE +
Sbjct: 183 PESLSDNIFSRQSDVWSFGVVLYELFT-------YCDKSCSPSAEFLRMMGCERDVPALC 235
Query: 251 --------AQELMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSV 292
Q L P + + EL+K LC P DRP+ S++
Sbjct: 236 RLLELLEEGQRLPAPPACPAEV-HELMK------LCWAPSPQDRPSFSAL 278
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 123 CEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEA 182
C Y + +++L S + + D R ++ ++ M KI+DFG+AR
Sbjct: 162 CTYQLARGMEYLA--SQKCIHRDLAARNVLV---TENNVM--KIADFGLARDINNIDXXK 214
Query: 183 NTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
T +MAPE + +++ +SDV+SFGVL+ EI +
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 123 CEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEA 182
C Y + +++L S + + D R ++ ++ M KI+DFG+AR
Sbjct: 162 CTYQLARGMEYLA--SQKCIHRDLAARNVLV---TENNVM--KIADFGLARDINNIDXXK 214
Query: 183 NTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
T +MAPE + +++ +SDV+SFGVL+ EI +
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 38/204 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-----IAVKRL----SRSSGQGLQEFKNLIAKLQ 102
F LG G FG VYKG+ + E +A+K L S + + + + ++A +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 103 HKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ--------LDW-------- 146
+ ++ R I + MP L D R + L+W
Sbjct: 80 NPHVCRLLGICLTSTVQL-IMQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGM 134
Query: 147 ----NRRMCIINGIARD----HKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEY 198
+RR+ + AR+ + KI+DFG+A++ G + E + +MA E
Sbjct: 135 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 194
Query: 199 ALEGLFSVKSDVFSFGVLLLEIIS 222
L +++ +SDV+S+GV + E+++
Sbjct: 195 ILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 33/203 (16%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDK-EIAVKRLSRSSGQG-----LQEFKNLIAKLQHKNL 106
++N + +GEG +G V N +K +A+K++S Q L+E K L+ + +H+N+
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL-RFRHENI 103
Query: 107 VRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC-----IINGIARDHK 161
+ Y+ + L+ ++ L N +C I+ G+ H
Sbjct: 104 IGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLS-NDHICYFLYQILRGLKYIHS 162
Query: 162 MNP------------------KISDFGMARVFGGNQSEAN-TNRVVGTYGYMAPEYALEG 202
N KI DFG+ARV + V T Y APE L
Sbjct: 163 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 222
Query: 203 LFSVKS-DVFSFGVLLLEIISGR 224
KS D++S G +L E++S R
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 38/204 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-----IAVKRL----SRSSGQGLQEFKNLIAKLQ 102
F LG G FG VYKG+ + E +A+K L S + + + + ++A +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 103 HKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ--------LDW-------- 146
+ ++ R I + MP L D R + L+W
Sbjct: 78 NPHVCRLLGICLTSTVQL-IMQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGM 132
Query: 147 ----NRRMCIINGIARD----HKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEY 198
+RR+ + AR+ + KI+DFG+A++ G + E + +MA E
Sbjct: 133 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 199 ALEGLFSVKSDVFSFGVLLLEIIS 222
L +++ +SDV+S+GV + E+++
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 33/203 (16%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDK-EIAVKRLSRSSGQG-----LQEFKNLIAKLQHKNL 106
++N + +GEG +G V N +K +A+K++S Q L+E K L+ + +H+N+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL-RFRHENI 87
Query: 107 VRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC-----IINGIARDHK 161
+ Y+ ++ L+ + L N +C I+ G+ H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLS-NDHICYFLYQILRGLKYIHS 146
Query: 162 MNP------------------KISDFGMARVFGGNQSEAN-TNRVVGTYGYMAPEYALEG 202
N KI DFG+ARV + V T Y APE L
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 203 LFSVKS-DVFSFGVLLLEIISGR 224
KS D++S G +L E++S R
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 38/203 (18%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDKE-----IAVKRL----SRSSGQGLQEFKNLIAKLQH 103
F LG G FG VYKG+ + E +A+K L S + + + + ++A + +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 104 KNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ--------LDW--------- 146
++ R I + MP L D R + L+W
Sbjct: 102 PHVCRLLGICLTSTVQL-ITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMN 156
Query: 147 ---NRRMCIINGIARD----HKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYA 199
+RR+ + AR+ + KI+DFG+A++ G + E + +MA E
Sbjct: 157 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 216
Query: 200 LEGLFSVKSDVFSFGVLLLEIIS 222
L +++ +SDV+S+GV + E+++
Sbjct: 217 LHRIYTHQSDVWSYGVTVWELMT 239
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 38/204 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-----IAVKRL----SRSSGQGLQEFKNLIAKLQ 102
F LG G FG VYKG+ + E +A+K L S + + + + ++A +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 103 HKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ--------LDW-------- 146
+ ++ R I + MP L D R + L+W
Sbjct: 76 NPHVCRLLGICLTSTVQL-IMQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGM 130
Query: 147 ----NRRMCIINGIARD----HKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEY 198
+RR+ + AR+ + KI+DFG+A++ G + E + +MA E
Sbjct: 131 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 199 ALEGLFSVKSDVFSFGVLLLEIIS 222
L +++ +SDV+S+GV + E+++
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 57/213 (26%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDD------KEIAVKRLSRSSGQGLQEFKNLIAKLQHKN 105
N+ + +LG+G F V + V K I K+LS Q L+ + KLQH N
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 66
Query: 106 LVRXXXXXXXXXXXXXICEYMPNKSLDFLLFD-----------STRSVQLDWNRRMCI-- 152
+VR + + + +S +L+FD R + + CI
Sbjct: 67 IVR-------------LHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ 113
Query: 153 -INGIARDH-------KMNP--------------KISDFGMARVFGGNQSEANTNRVVGT 190
+ IA H + P K++DFG+A N SEA + GT
Sbjct: 114 ILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEA-WHGFAGT 170
Query: 191 YGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
GY++PE + +S D+++ GV+L ++ G
Sbjct: 171 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 38/204 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-----IAVKRL----SRSSGQGLQEFKNLIAKLQ 102
F LG G FG VYKG+ + E +A+K L S + + + + ++A +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 103 HKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ--------LDW-------- 146
+ ++ R I + MP L D R + L+W
Sbjct: 77 NPHVCRLLGICLTSTVQL-IMQLMPFGXL----LDYVREHKDNIGSQYLLNWCVQIAKGM 131
Query: 147 ----NRRMCIINGIARD----HKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEY 198
+RR+ + AR+ + KI+DFG+A++ G + E + +MA E
Sbjct: 132 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 191
Query: 199 ALEGLFSVKSDVFSFGVLLLEIIS 222
L +++ +SDV+S+GV + E+++
Sbjct: 192 ILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KI DFG+AR + + +MAPE + +++V+SDV+S+G+LL EI S
Sbjct: 206 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 38/204 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-----IAVKRL----SRSSGQGLQEFKNLIAKLQ 102
F LG G FG VYKG+ + E +A+K L S + + + + ++A +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 103 HKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ--------LDW-------- 146
+ ++ R I + MP L D R + L+W
Sbjct: 79 NPHVCRLLGICLTSTVQL-IMQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGM 133
Query: 147 ----NRRMCIINGIARD----HKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEY 198
+RR+ + AR+ + KI+DFG+A++ G + E + +MA E
Sbjct: 134 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 199 ALEGLFSVKSDVFSFGVLLLEIIS 222
L +++ +SDV+S+GV + E+++
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KI DFG+AR + + +MAPE + +++V+SDV+S+G+LL EI S
Sbjct: 200 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KI DFG+AR + + +MAPE + +++V+SDV+S+G+LL EI S
Sbjct: 192 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 92/222 (41%), Gaps = 43/222 (19%)
Query: 38 LPLFPLDLIHEATRNFSNENK----LGEGGFGPVYKGVLNDDK----EIAVKRLSR---- 85
L P + +T FS+ K LG+G FG V +L DK E AVK +S+
Sbjct: 33 LHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVK 89
Query: 86 --SSGQGLQEFKNLIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ 143
+ + L L+ +L H N+++ + E L + R +
Sbjct: 90 QKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE 149
Query: 144 LDWNRRM-CIINGIARDHK---------------------MNPKISDFGMARVFGGNQSE 181
+D R + +++GI HK N +I DFG++ F ++
Sbjct: 150 VDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 209
Query: 182 ANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+ +GT Y+APE L G + K DV+S GV+L ++SG
Sbjct: 210 KDK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 118/293 (40%), Gaps = 72/293 (24%)
Query: 51 RNFSNENKLGEGGFGPV----YKGV-LNDDKEIAVKRLSRSSGQGLQEFKNLIAKLQ--H 103
R+ ++LG+G FG V Y + N +AVK+L S ++F+ I L+ H
Sbjct: 11 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 70
Query: 104 KNLV---RXXXXXXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNR----------- 148
+ + R + EY+P+ L DFL R LD +R
Sbjct: 71 SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKG 127
Query: 149 ------RMCIINGIAR-----DHKMNPKISDFGMARVFGGNQS-----EANTNRVVGTYG 192
R C+ +A + + + KI+DFG+A++ ++ E + +
Sbjct: 128 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF---- 183
Query: 193 YMAPEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCEGN-- 250
+ APE + +FS +SDV+SFGV+L E+ + Y + + + CE +
Sbjct: 184 WYAPESLSDNIFSRQSDVWSFGVVLYELFT-------YCDKSCSPSAEFLRMMGCERDVP 236
Query: 251 -----------AQELMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSV 292
Q L P + + EL+K LC P DRP+ S++
Sbjct: 237 ALCRLLELLEEGQRLPAPPACPAEV-HELMK------LCWAPSPQDRPSFSAL 282
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 92/222 (41%), Gaps = 43/222 (19%)
Query: 38 LPLFPLDLIHEATRNFSNENK----LGEGGFGPVYKGVLNDDK----EIAVKRLSR---- 85
L P + +T FS+ K LG+G FG V +L DK E AVK +S+
Sbjct: 32 LHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVK 88
Query: 86 --SSGQGLQEFKNLIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ 143
+ + L L+ +L H N+++ + E L + R +
Sbjct: 89 QKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE 148
Query: 144 LDWNRRM-CIINGIARDHK---------------------MNPKISDFGMARVFGGNQSE 181
+D R + +++GI HK N +I DFG++ F ++
Sbjct: 149 VDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 208
Query: 182 ANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+ +GT Y+APE L G + K DV+S GV+L ++SG
Sbjct: 209 KDK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KI DFG+AR + + +MAPE + +++V+SDV+S+G+LL EI S
Sbjct: 204 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 115/302 (38%), Gaps = 84/302 (27%)
Query: 52 NFSNENKLGEGGFGPVYK----GVLNDDK--EIAVKRLSRSSGQGLQ-EFKN---LIAKL 101
N +GEG FG V++ G+L + +AVK L + +Q +F+ L+A+
Sbjct: 48 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF 107
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSL-DFLLFDSTRSV------------------ 142
+ N+V+ + EYM L +FL S +V
Sbjct: 108 DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPG 167
Query: 143 --QLDWNRRMCIINGIA-------------RD---------HKMNPKISDFGMAR-VFGG 177
L ++CI +A RD M KI+DFG++R ++
Sbjct: 168 PPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA 227
Query: 178 NQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS-------GRKDTRFY 230
+ +A+ N + +M PE ++ +SDV+++GV+L EI S G
Sbjct: 228 DYYKADGNDAIPI-RWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVI 286
Query: 231 LYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMS 290
Y + ++L C N L+ ++ LC + PADRP+
Sbjct: 287 YYVRDGNILA------CPENCP----------------LELYNLMRLCWSKLPADRPSFC 324
Query: 291 SV 292
S+
Sbjct: 325 SI 326
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KI DFG+AR + + +MAPE + +++V+SDV+S+G+LL EI S
Sbjct: 204 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 119/290 (41%), Gaps = 66/290 (22%)
Query: 51 RNFSNENKLGEGGFGPV----YKGV-LNDDKEIAVKRLSRSSGQGLQEFKNLIAKLQ--H 103
R+ ++LG+G FG V Y + N +AVK+L S ++F+ I L+ H
Sbjct: 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 82
Query: 104 KNLV---RXXXXXXXXXXXXXICEYMPNKSL-DFL-------------LFDSTRSVQLDW 146
+ + R + EY+P+ L DFL L+ S +++
Sbjct: 83 SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 142
Query: 147 -NRRMCIINGIAR-----DHKMNPKISDFGMARVFGGNQS-----EANTNRVVGTYGYMA 195
R C+ +A + + + KI+DFG+A++ ++ E + + + A
Sbjct: 143 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF----WYA 198
Query: 196 PEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCEGN----- 250
PE + +FS +SDV+SFGV+L E+ + Y + + + CE +
Sbjct: 199 PESLSDNIFSRQSDVWSFGVVLYELFT-------YCDKSCSPSAEFLRMMGCERDVPALS 251
Query: 251 --------AQELMDPVLKESFILEELLKRIHIGLLCVQEDPADRPTMSSV 292
Q L P + + EL+K LC P DRP+ S++
Sbjct: 252 RLLELLEEGQRLPAPPACPAEV-HELMK------LCWAPSPQDRPSFSAL 294
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 57/213 (26%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDD------KEIAVKRLSRSSGQGLQEFKNLIAKLQHKN 105
N+ + +LG+G F V + V K I K+LS Q L+ + KLQH N
Sbjct: 6 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 65
Query: 106 LVRXXXXXXXXXXXXXICEYMPNKSLDFLLFD-----------STRSVQLDWNRRMCI-- 152
+VR + + + +S +L+FD R + + CI
Sbjct: 66 IVR-------------LHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ 112
Query: 153 -INGIARDH-------KMNP--------------KISDFGMARVFGGNQSEANTNRVVGT 190
+ IA H + P K++DFG+A N SEA + GT
Sbjct: 113 ILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEA-WHGFAGT 169
Query: 191 YGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
GY++PE + +S D+++ GV+L ++ G
Sbjct: 170 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGR 224
K+ DFG++ G ++ N VGT YMAPE +SV+SD++S G+ L+E+ GR
Sbjct: 155 KLCDFGVS----GQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KI DFG+AR + + +MAPE + +++V+SDV+S+G+LL EI S
Sbjct: 198 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 31/201 (15%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAKLQHK 104
NF K+GEG +G VYK E +A+K++ + ++E +L+ +L H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKELNHP 62
Query: 105 NLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARDHK- 161
N+V+ + E++ F+ + + L + ++ G++ H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH 122
Query: 162 ------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE-GL 203
+ P K++DFG+AR F G T+ VV T Y APE L
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEILLGCKY 180
Query: 204 FSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRR 201
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDK-EIAVKRLSRSSGQG-----LQEFKNLIAKLQHKNL 106
++N + +GEG +G V N +K +A++++S Q L+E K L+ + +H+N+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILL-RFRHENI 87
Query: 107 VRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC-----IINGIARDHK 161
+ Y+ ++ L+ ++ L N +C I+ G+ H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICYFLYQILRGLKYIHS 146
Query: 162 MNP------------------KISDFGMARVFGGNQSEAN-TNRVVGTYGYMAPEYALEG 202
N KI DFG+ARV + V T Y APE L
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 203 LFSVKS-DVFSFGVLLLEIISGR 224
KS D++S G +L E++S R
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 87/215 (40%), Gaps = 57/215 (26%)
Query: 50 TRNFSNENKLGEGGFGPVYKGVLNDD------KEIAVKRLSRSSGQGLQEFKNLIAKLQH 103
+ N+ + +LG+G F V + V K I K+LS Q L+ + KLQH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 104 KNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFD-----------STRSVQLDWNRRMCI 152
N+VR + + + +S +L+FD R + + CI
Sbjct: 65 PNIVR-------------LHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI 111
Query: 153 ---INGIARDH-------KMNP--------------KISDFGMARVFGGNQSEANTNRVV 188
+ IA H + P K++DFG+A N SEA +
Sbjct: 112 QQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEA-WHGFA 168
Query: 189 GTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
GT GY++PE + +S D+++ GV+L ++ G
Sbjct: 169 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 123 CEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEA 182
C Y + +++L S + + D R ++ ++ M KI+DFG+AR
Sbjct: 149 CTYQLARGMEYLA--SQKCIHRDLTARNVLV---TENNVM--KIADFGLARDINNIDYYK 201
Query: 183 NTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
T +MAPE + +++ +SDV+SFGVL+ EI +
Sbjct: 202 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 39/207 (18%)
Query: 51 RNFSNENKLGEGGFGPV----YKGV-LNDDKEIAVKRLSRSSGQGLQEFKNLIAKLQ--H 103
R+ ++LG+G FG V Y + N +AVK+L S ++F+ I L+ H
Sbjct: 10 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 69
Query: 104 KNLV---RXXXXXXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNR----------- 148
+ + R + EY+P+ L DFL R LD +R
Sbjct: 70 SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKG 126
Query: 149 ------RMCIINGIAR-----DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYG--YMA 195
R C+ +A + + + KI+DFG+A++ ++ + R G + A
Sbjct: 127 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK-DYYVVREPGQSPIFWYA 185
Query: 196 PEYALEGLFSVKSDVFSFGVLLLEIIS 222
PE + +FS +SDV+SFGV+L E+ +
Sbjct: 186 PESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 94/209 (44%), Gaps = 43/209 (20%)
Query: 50 TRNFSNEN------KLGEGGFGPVYKGVLNDDKEIAV----KRLSRSSGQGLQEFK---N 96
TR+ + E+ +LG+G FG VYK +KE +V K + S + L+++ +
Sbjct: 30 TRDLNPEDFWEIIGELGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEID 86
Query: 97 LIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTR-----SVQLDWNRRMC 151
++A H N+V+ + E+ ++D ++ + R +Q+ + +
Sbjct: 87 ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD 146
Query: 152 IING------IARDHKM---------NPKISDFGMARVFGGNQSEANTNRVVGTYGYMAP 196
+N I RD K + K++DFG++ ++ + +GT +MAP
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRTIQRRDSFIGTPYWMAP 204
Query: 197 EYAL-----EGLFSVKSDVFSFGVLLLEI 220
E + + + K+DV+S G+ L+E+
Sbjct: 205 EVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 31/201 (15%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKEIA----VKRLSRSSG---QGLQEFKNLIAKLQHK 104
NF K+GEG +G VYK E+ ++ + + G ++E +L+ +L H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREI-SLLKELNHP 62
Query: 105 NLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARDHK- 161
N+V+ + E++ F+ + + L + ++ G+A H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 162 ------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE-GL 203
+ P K++DFG+AR F G T+ VV T Y APE L
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEILLGCKY 180
Query: 204 FSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 31/201 (15%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKEIA----VKRLSRSSG---QGLQEFKNLIAKLQHK 104
NF K+GEG +G VYK E+ ++ + + G ++E +L+ +L H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREI-SLLKELNHP 61
Query: 105 NLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARDHK- 161
N+V+ + E++ F+ + + L + ++ G+A H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 162 ------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE-GL 203
+ P K++DFG+AR F G T+ VV T Y APE L
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEILLGCKY 179
Query: 204 FSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRR 200
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 153 INGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFS 212
++ + DH+ + K++DFGM + G + T GT Y+APE E L+ D ++
Sbjct: 152 LDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWA 209
Query: 213 FGVLLLEIISGR 224
GVLL E++ G
Sbjct: 210 MGVLLYEMLCGH 221
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 123 CEYMPNKSLDFLLFDSTRSVQLDWNRRMCII--NGIARDHKMNPKISDFGMARVFGGNQS 180
C Y + +++L S + + D R ++ N + R I+DFG+AR
Sbjct: 162 CTYQLARGMEYLA--SQKCIHRDLAARNVLVTENNVMR-------IADFGLARDINNIDY 212
Query: 181 EANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
T +MAPE + +++ +SDV+SFGVL+ EI +
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 159 DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLL 218
D N +ISD G+A Q++ T GT G+MAPE L + D F+ GV L
Sbjct: 323 DDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLY 380
Query: 219 EIISGRKDTR 228
E+I+ R R
Sbjct: 381 EMIAARGPFR 390
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KI+DFG+AR T +MAPE + +++ +SDV+SFGVL+ EI +
Sbjct: 243 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGV 215
+A KM KISDFG++R S ++ +MA E + +++ +SDV+SFGV
Sbjct: 183 VAEGRKM--KISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGV 240
Query: 216 LLLEIIS 222
LL EI++
Sbjct: 241 LLWEIVT 247
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGV 215
+A KM KISDFG++R S ++ +MA E + +++ +SDV+SFGV
Sbjct: 183 VAEGRKM--KISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGV 240
Query: 216 LLLEIIS 222
LL EI++
Sbjct: 241 LLWEIVT 247
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 27/195 (13%)
Query: 53 FSNENKLGEGGFGPVYKGVLN-DDKEIAVKRLS----RSSGQGLQEFKNLIAKLQHKNLV 107
F+ K+G+G FG V+KG+ N K +A+K + + +Q+ ++++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 108 RXXXXXXXXXXXXXICEYMPNKS-LDFL---LFDSTRSVQ--------LDW-------NR 148
+ I EY+ S LD L D T+ LD+ +R
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHR 128
Query: 149 RMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKS 208
+ N + +H K++DFG+A Q N VGT +MAPE + + K+
Sbjct: 129 DIKAANVLLSEHG-EVKLADFGVAGQLTDTQ--IKRNXFVGTPFWMAPEVIKQSAYDSKA 185
Query: 209 DVFSFGVLLLEIISG 223
D++S G+ +E+ G
Sbjct: 186 DIWSLGITAIELARG 200
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 123 CEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEA 182
C Y + +++L S + + D R ++ ++ M KI+DFG+AR
Sbjct: 162 CTYQLARGMEYLA--SQKCIHRDLAARNVLVT---ENNVM--KIADFGLARDINNIDYYK 214
Query: 183 NTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
T +MAPE + +++ +SDV+SFGVL+ EI +
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 123 CEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEA 182
C Y + +++L S + + D R ++ ++ M KI+DFG+AR
Sbjct: 162 CTYQLARGMEYLA--SQKCIHRDLAARNVLVT---ENNVM--KIADFGLARDINNIDYYK 214
Query: 183 NTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
T +MAPE + +++ +SDV+SFGVL+ EI +
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 86/213 (40%), Gaps = 34/213 (15%)
Query: 43 LDLIHEATRNFSNENKLGEGGFGPVYKGVL-----NDDKEIAVKRLSRSSG----QGLQE 93
+D H R LGEG FG V N +++AVK L SG L++
Sbjct: 1 VDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKK 60
Query: 94 FKNLIAKLQHKNLVRXXXXXXXX--XXXXXICEYMPNKSLDFLLFDSTRSV----QLDWN 147
++ L H+N+V+ I E++P+ SL L + + QL +
Sbjct: 61 EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYA 120
Query: 148 RRMC----------------IINGIARDHKMNPKISDFGMARVFGGNQSEANT--NRVVG 189
++C + + + KI DFG+ + ++ +R
Sbjct: 121 VQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSP 180
Query: 190 TYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+ Y APE ++ F + SDV+SFGV L E+++
Sbjct: 181 VFWY-APECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 123 CEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEA 182
C Y + +++L S + + D R ++ ++ M KI+DFG+AR
Sbjct: 162 CTYQLARGMEYLA--SQKCIHRDLAARNVLVT---ENNVM--KIADFGLARDINNIDYYK 214
Query: 183 NTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
T +MAPE + +++ +SDV+SFGVL+ EI +
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 123 CEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEA 182
C Y + +++L S + + D R ++ ++ M KI+DFG+AR
Sbjct: 162 CTYQLARGMEYLA--SQKCIHRDLAARNVLV---TENNVM--KIADFGLARDINNIDYYK 214
Query: 183 NTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
T +MAPE + +++ +SDV+SFGVL+ EI +
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 123 CEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEA 182
C Y + +++L S + + D R ++ ++ M KI+DFG+AR
Sbjct: 151 CTYQLARGMEYLA--SQKCIHRDLAARNVLV---TENNVM--KIADFGLARDINNIDYYK 203
Query: 183 NTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
T +MAPE + +++ +SDV+SFGVL+ EI +
Sbjct: 204 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 159 DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLL 218
D N +ISD G+A Q++ T GT G+MAPE L + D F+ GV L
Sbjct: 323 DDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLY 380
Query: 219 EIISGRKDTR 228
E+I+ R R
Sbjct: 381 EMIAARGPFR 390
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 123 CEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEA 182
C Y + +++L S + + D R ++ ++ M KI+DFG+AR
Sbjct: 162 CTYQLARGMEYLA--SQKCIHRDLAARNVLV---TENNVM--KIADFGLARDINNIDYYK 214
Query: 183 NTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
T +MAPE + +++ +SDV+SFGVL+ EI +
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 31/204 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAKL 101
+ NF K+GEG +G VYK E +A+K++ + ++E +L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKEL 59
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARD 159
H N+V+ + E++ F+ + + L + ++ G+A
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 160 HK-------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
H + P K++DFG+AR F G + VV T Y APE L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 177
Query: 202 -GLFSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 159 DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLL 218
D N +ISD G+A Q++ T GT G+MAPE L + D F+ GV L
Sbjct: 323 DDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLY 380
Query: 219 EIISGRKDTR 228
E+I+ R R
Sbjct: 381 EMIAARGPFR 390
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 27/195 (13%)
Query: 53 FSNENKLGEGGFGPVYKGVLN-DDKEIAVKRLS----RSSGQGLQEFKNLIAKLQHKNLV 107
F+ K+G+G FG V+KG+ N K +A+K + + +Q+ ++++ +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 108 RXXXXXXXXXXXXXICEYMPNKS-LDFL---LFDSTRSVQ--------LDW-------NR 148
+ I EY+ S LD L D T+ LD+ +R
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHR 143
Query: 149 RMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKS 208
+ N + +H K++DFG+A Q N VGT +MAPE + + K+
Sbjct: 144 DIKAANVLLSEHG-EVKLADFGVAGQLTDTQ--IKRNXFVGTPFWMAPEVIKQSAYDSKA 200
Query: 209 DVFSFGVLLLEIISG 223
D++S G+ +E+ G
Sbjct: 201 DIWSLGITAIELARG 215
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 31/201 (15%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAKLQHK 104
NF K+GEG +G VYK E +A+K++ + ++E +L+ +L H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKELNHP 61
Query: 105 NLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARDHK- 161
N+V+ + E++ F+ + + L + ++ G+A H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 162 ------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE-GL 203
+ P K++DFG+AR F G + VV T Y APE L
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLGCKY 179
Query: 204 FSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRR 200
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 123 CEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEA 182
C Y + +++L S + + D R ++ ++ M KI+DFG+AR
Sbjct: 154 CTYQLARGMEYLA--SQKCIHRDLAARNVLV---TENNVM--KIADFGLARDINNIDYYK 206
Query: 183 NTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
T +MAPE + +++ +SDV+SFGVL+ EI +
Sbjct: 207 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 159 DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLL 218
D N +ISD G+A Q++ T GT G+MAPE L + D F+ GV L
Sbjct: 323 DDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLY 380
Query: 219 EIISGRKDTR 228
E+I+ R R
Sbjct: 381 EMIAARGPFR 390
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 107/291 (36%), Gaps = 71/291 (24%)
Query: 58 KLGEGGFGPVYKGVLNDDK----EIAVKRLSR---SSGQGLQEF---KNLIAKLQHKNLV 107
KLG+G FG V +G + +AVK L S + + +F N + L H+NL+
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL---------DFLL----------------FDSTRSV 142
R + E P SL FLL +S R +
Sbjct: 85 RLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 143
Query: 143 QLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEA--NTNRVVGTYGYMAPEYAL 200
D R ++ RD KI DFG+ R N +R V + + APE
Sbjct: 144 HRDLAARNLLL--ATRDLV---KIGDFGLMRALPQNDDHXVMQEHRKV-PFAWCAPESLK 197
Query: 201 EGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLK 260
FS SD + FGV L E + TY + W N +++ + K
Sbjct: 198 TRTFSHASDTWMFGVTLWE------------------MFTYGQEPWIGLNGSQILHKIDK 239
Query: 261 ESFIL---EELLKRIH-IGLLCVQEDPADRPTMSSVVFMLATDTITLLQPT 307
E L E+ + I+ + + C P DRPT F+ D + QPT
Sbjct: 240 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPT-----FVALRDFLLEAQPT 285
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 86/204 (42%), Gaps = 38/204 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-----IAVKRL----SRSSGQGLQEFKNLIAKLQ 102
F LG G FG VYKG+ + E +A+K L S + + + + ++A +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 103 HKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ--------LDW-------- 146
+ ++ R I + MP L D R + L+W
Sbjct: 76 NPHVCRLLGICLTSTVQL-ITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGM 130
Query: 147 ----NRRMCIINGIARD----HKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEY 198
+RR+ + AR+ + KI+DFG A++ G + E + +MA E
Sbjct: 131 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 199 ALEGLFSVKSDVFSFGVLLLEIIS 222
L +++ +SDV+S+GV + E+++
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 85/200 (42%), Gaps = 24/200 (12%)
Query: 46 IHEATRNFSNENKLGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKNLIAKL--- 101
+ + + ++ K+G+G G VY + + +E+A+++++ + N I +
Sbjct: 15 VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN 74
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRRMCII------- 153
++ N+V + EY+ SL D + Q+ R C+
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHS 134
Query: 154 -NGIARDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGL 203
I RD K + K++DFG QS+ +T +VGT +MAPE
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKA 192
Query: 204 FSVKSDVFSFGVLLLEIISG 223
+ K D++S G++ +E+I G
Sbjct: 193 YGPKVDIWSLGIMAIEMIEG 212
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 31/204 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAKL 101
+ NF K+GEG +G VYK E +A+K++ + ++E +L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKEL 59
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARD 159
H N+V+ + E++ F+ + + L + ++ G+A
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 160 HK-------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
H + P K++DFG+AR F G + VV T Y APE L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 177
Query: 202 -GLFSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 31/201 (15%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAKLQHK 104
NF K+GEG +G VYK E +A+K++ + ++E +L+ +L H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKELNHP 61
Query: 105 NLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARDHK- 161
N+V+ + E++ F+ + + L + ++ G+A H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 162 ------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE-GL 203
+ P K++DFG+AR F G + VV T Y APE L
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLGCKY 179
Query: 204 FSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRR 200
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 96/223 (43%), Gaps = 31/223 (13%)
Query: 29 GKKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKGVLNDDKE-----IAVKRL 83
G + S E P L I + T F LG G FG VYKG+ + E +A+K L
Sbjct: 1 GAMGIRSGEAPNQALLRILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL 59
Query: 84 ----SRSSGQGLQEFKNLIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDST 139
S + + + + ++A + + ++ R I + MP L + +
Sbjct: 60 REATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHK 118
Query: 140 RSVQ----LDW------------NRRMCIINGIARD----HKMNPKISDFGMARVFGGNQ 179
++ L+W +RR+ + AR+ + KI+DFG A++ G +
Sbjct: 119 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 178
Query: 180 SEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
E + +MA E L +++ +SDV+S+GV + E+++
Sbjct: 179 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 31/204 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAKL 101
+ NF K+GEG +G VYK E +A+K++ + ++E +L+ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKEL 60
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARD 159
H N+V+ + E++ F+ + + L + ++ G+A
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 160 HK-------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
H + P K++DFG+AR F G + VV T Y APE L
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 178
Query: 202 -GLFSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 31/201 (15%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAKLQHK 104
NF K+GEG +G VYK E +A+K++ + ++E +L+ +L H
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKELNHP 63
Query: 105 NLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARDHK- 161
N+V+ + E++ F+ + + L + ++ G+A H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 162 ------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE-GL 203
+ P K++DFG+AR F G + VV T Y APE L
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLGCKY 181
Query: 204 FSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 31/204 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAKL 101
+ NF K+GEG +G VYK E +A+K++ + ++E +L+ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKEL 61
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARD 159
H N+V+ + E++ F+ + + L + ++ G+A
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 160 HK-------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
H + P K++DFG+AR F G + VV T Y APE L
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 179
Query: 202 -GLFSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 31/204 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAKL 101
+ NF K+GEG +G VYK E +A+K++ + ++E +L+ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKEL 61
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARD 159
H N+V+ + E++ F+ + + L + ++ G+A
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 160 HK-------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
H + P K++DFG+AR F G + VV T Y APE L
Sbjct: 122 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 179
Query: 202 -GLFSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 31/204 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAKL 101
+ NF K+GEG +G VYK E +A+K++ + ++E +L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKEL 59
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARD 159
H N+V+ + E++ F+ + + L + ++ G+A
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 160 HK-------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
H + P K++DFG+AR F G + VV T Y APE L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 177
Query: 202 -GLFSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 38/203 (18%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDKE-----IAVKRL----SRSSGQGLQEFKNLIAKLQH 103
F LG G FG VYKG+ + E +A+K L S + + + + ++A + +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 104 KNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ--------LDW--------- 146
++ R I + MP L D R + L+W
Sbjct: 81 PHVCRLLGICLTSTVQL-IMQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMN 135
Query: 147 ---NRRMCIINGIARD----HKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYA 199
+RR+ + AR+ + KI+DFG A++ G + E + +MA E
Sbjct: 136 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 195
Query: 200 LEGLFSVKSDVFSFGVLLLEIIS 222
L +++ +SDV+S+GV + E+++
Sbjct: 196 LHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 31/204 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAKL 101
+ NF K+GEG +G VYK E +A+K++ + ++E +L+ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKEL 60
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARD 159
H N+V+ + E++ F+ + + L + ++ G+A
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 160 HK-------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
H + P K++DFG+AR F G + VV T Y APE L
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 178
Query: 202 -GLFSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 31/204 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAKL 101
+ NF K+GEG +G VYK E +A+K++ + ++E +L+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKEL 62
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARD 159
H N+V+ + E++ F+ + + L + ++ G+A
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 160 HK-------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
H + P K++DFG+AR F G + VV T Y APE L
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 180
Query: 202 -GLFSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 87/199 (43%), Gaps = 30/199 (15%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDKE-----IAVKRL----SRSSGQGLQEFKNLIAKLQH 103
F LG G FG VYKG+ + E +A+K L S + + + + ++A + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 104 KNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ----LDW------------N 147
++ R I + MP L + + ++ L+W +
Sbjct: 79 PHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 148 RRMCIINGIARD----HKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGL 203
RR+ + AR+ + KI+DFG A++ G + E + +MA E L +
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 204 FSVKSDVFSFGVLLLEIIS 222
++ +SDV+S+GV + E+++
Sbjct: 198 YTHQSDVWSYGVTVWELMT 216
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 107/291 (36%), Gaps = 71/291 (24%)
Query: 58 KLGEGGFGPVYKGVLNDDK----EIAVKRLSR---SSGQGLQEF---KNLIAKLQHKNLV 107
KLG+G FG V +G + +AVK L S + + +F N + L H+NL+
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL---------DFLL----------------FDSTRSV 142
R + E P SL FLL +S R +
Sbjct: 79 RLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 137
Query: 143 QLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSE--ANTNRVVGTYGYMAPEYAL 200
D R ++ RD KI DFG+ R N +R V + + APE
Sbjct: 138 HRDLAARNLLL--ATRDLV---KIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESLK 191
Query: 201 EGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLK 260
FS SD + FGV L E + TY + W N +++ + K
Sbjct: 192 TRTFSHASDTWMFGVTLWE------------------MFTYGQEPWIGLNGSQILHKIDK 233
Query: 261 ESFIL---EELLKRIH-IGLLCVQEDPADRPTMSSVVFMLATDTITLLQPT 307
E L E+ + I+ + + C P DRPT F+ D + QPT
Sbjct: 234 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPT-----FVALRDFLLEAQPT 279
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 31/204 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAKL 101
+ NF K+GEG +G VYK E +A+K++ + ++E +L+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKEL 62
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARD 159
H N+V+ + E++ F+ + + L + ++ G+A
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 160 HK-------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
H + P K++DFG+AR F G + VV T Y APE L
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 180
Query: 202 -GLFSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 31/204 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAKL 101
+ NF K+GEG +G VYK E +A+K++ + ++E +L+ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKEL 61
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARD 159
H N+V+ + E++ F+ + + L + ++ G+A
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 160 HK-------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
H + P K++DFG+AR F G + VV T Y APE L
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 179
Query: 202 -GLFSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 107/291 (36%), Gaps = 71/291 (24%)
Query: 58 KLGEGGFGPVYKGVLNDDK----EIAVKRLSR---SSGQGLQEF---KNLIAKLQHKNLV 107
KLG+G FG V +G + +AVK L S + + +F N + L H+NL+
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL---------DFLL----------------FDSTRSV 142
R + E P SL FLL +S R +
Sbjct: 85 RLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 143
Query: 143 QLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSE--ANTNRVVGTYGYMAPEYAL 200
D R ++ RD KI DFG+ R N +R V + + APE
Sbjct: 144 HRDLAARNLLL--ATRDLV---KIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESLK 197
Query: 201 EGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLK 260
FS SD + FGV L E + TY + W N +++ + K
Sbjct: 198 TRTFSHASDTWMFGVTLWE------------------MFTYGQEPWIGLNGSQILHKIDK 239
Query: 261 ESFIL---EELLKRIH-IGLLCVQEDPADRPTMSSVVFMLATDTITLLQPT 307
E L E+ + I+ + + C P DRPT F+ D + QPT
Sbjct: 240 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPT-----FVALRDFLLEAQPT 285
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 37/196 (18%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLS-RSSGQGLQEFK----NLIAKLQHKNLVRXXXX 112
K+GEG +G VYK N + A+K++ +G+ +++ +L+H N+V+
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 113 XXXXXXXXXICEYMPNKSLDFLL------FDSTRSVQLDWNRRMCIINGIARDH------ 160
+ E++ ++ L LL +S + + ++NGIA H
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSF----LLQLLNGIAYCHDRRVLH 123
Query: 161 -KMNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYAL-EGLFSVK 207
+ P KI+DFG+AR F G T+ VV T Y AP+ + +S
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTT 181
Query: 208 SDVFSFGVLLLEIISG 223
D++S G + E+++G
Sbjct: 182 IDIWSVGCIFAEMVNG 197
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 31/204 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAKL 101
+ NF K+GEG +G VYK E +A+K++ + ++E +L+ +L
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKEL 63
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARD 159
H N+V+ + E++ F+ + + L + ++ G+A
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 160 HK-------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
H + P K++DFG+AR F G + VV T Y APE L
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 181
Query: 202 -GLFSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 93/209 (44%), Gaps = 43/209 (20%)
Query: 50 TRNFSNEN------KLGEGGFGPVYKGVLNDDKEIAV----KRLSRSSGQGLQEFK---N 96
TR+ + E+ +LG+G FG VYK +KE +V K + S + L+++ +
Sbjct: 30 TRDLNPEDFWEIIGELGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEID 86
Query: 97 LIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTR-----SVQLDWNRRMC 151
++A H N+V+ + E+ ++D ++ + R +Q+ + +
Sbjct: 87 ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD 146
Query: 152 IING------IARDHKM---------NPKISDFGMARVFGGNQSEANTNRVVGTYGYMAP 196
+N I RD K + K++DFG++ + + +GT +MAP
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRXIQRRDSFIGTPYWMAP 204
Query: 197 EYAL-----EGLFSVKSDVFSFGVLLLEI 220
E + + + K+DV+S G+ L+E+
Sbjct: 205 EVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 31/204 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAKL 101
+ NF K+GEG +G VYK E +A+K++ + ++E +L+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKEL 62
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARD 159
H N+V+ + E++ F+ + + L + ++ G+A
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 160 HK-------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
H + P K++DFG+AR F G + VV T Y APE L
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 180
Query: 202 -GLFSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 86/204 (42%), Gaps = 38/204 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-----IAVKRL----SRSSGQGLQEFKNLIAKLQ 102
F LG G FG VYKG+ + E +A+K L S + + + + ++A +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 103 HKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ--------LDW-------- 146
+ ++ R I + MP L D R + L+W
Sbjct: 78 NPHVCRLLGICLTSTVQL-IMQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGM 132
Query: 147 ----NRRMCIINGIARD----HKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEY 198
+RR+ + AR+ + KI+DFG A++ G + E + +MA E
Sbjct: 133 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 199 ALEGLFSVKSDVFSFGVLLLEIIS 222
L +++ +SDV+S+GV + E+++
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 37/196 (18%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLS-RSSGQGLQEFK----NLIAKLQHKNLVRXXXX 112
K+GEG +G VYK N + A+K++ +G+ +++ +L+H N+V+
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 113 XXXXXXXXXICEYMPNKSLDFLL------FDSTRSVQLDWNRRMCIINGIARDH------ 160
+ E++ ++ L LL +S + + ++NGIA H
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSF----LLQLLNGIAYCHDRRVLH 123
Query: 161 -KMNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYAL-EGLFSVK 207
+ P KI+DFG+AR F G T+ VV T Y AP+ + +S
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTT 181
Query: 208 SDVFSFGVLLLEIISG 223
D++S G + E+++G
Sbjct: 182 IDIWSVGCIFAEMVNG 197
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 31/204 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAKL 101
+ NF K+GEG +G VYK E +A+K++ + ++E +L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKEL 59
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARD 159
H N+V+ + E++ F+ + + L + ++ G+A
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 160 HK-------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
H + P K++DFG+AR F G + VV T Y APE L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 177
Query: 202 -GLFSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGV 215
+A KM KISDFG++R S ++ +MA E + +++ +SDV+SFGV
Sbjct: 183 VAEGRKM--KISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGV 240
Query: 216 LLLEIIS 222
LL EI++
Sbjct: 241 LLWEIVT 247
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 57/213 (26%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDD------KEIAVKRLSRSSGQGLQEFKNLIAKLQHKN 105
N+ + +LG+G F V + V K I K+LS Q L+ + KLQH N
Sbjct: 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 89
Query: 106 LVRXXXXXXXXXXXXXICEYMPNKSLDFLLFD-----------STRSVQLDWNRRMCI-- 152
+VR + + + +S +L+FD R + + CI
Sbjct: 90 IVR-------------LHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ 136
Query: 153 -INGIARDH-------KMNP--------------KISDFGMARVFGGNQSEANTNRVVGT 190
+ IA H + P K++DFG+A N SEA + GT
Sbjct: 137 ILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEA-WHGFAGT 193
Query: 191 YGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
GY++PE + +S D+++ GV+L ++ G
Sbjct: 194 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 107/291 (36%), Gaps = 71/291 (24%)
Query: 58 KLGEGGFGPVYKGVLNDDK----EIAVKRLSR---SSGQGLQEF---KNLIAKLQHKNLV 107
KLG+G FG V +G + +AVK L S + + +F N + L H+NL+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL---------DFLL----------------FDSTRSV 142
R + E P SL FLL +S R +
Sbjct: 75 RLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 133
Query: 143 QLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEA--NTNRVVGTYGYMAPEYAL 200
D R ++ RD KI DFG+ R N +R V + + APE
Sbjct: 134 HRDLAARNLLL--ATRDLV---KIGDFGLMRALPQNDDHXVMQEHRKV-PFAWCAPESLK 187
Query: 201 EGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLK 260
FS SD + FGV L E + TY + W N +++ + K
Sbjct: 188 TRTFSHASDTWMFGVTLWE------------------MFTYGQEPWIGLNGSQILHKIDK 229
Query: 261 ESFIL---EELLKRIH-IGLLCVQEDPADRPTMSSVVFMLATDTITLLQPT 307
E L E+ + I+ + + C P DRPT F+ D + QPT
Sbjct: 230 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPT-----FVALRDFLLEAQPT 275
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 30/200 (15%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-----IAVKRL----SRSSGQGLQEFKNLIAKLQ 102
F LG G FG VYKG+ + E +A+K L S + + + + ++A +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 103 HKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ----LDW------------ 146
+ ++ R I + MP L + + ++ L+W
Sbjct: 78 NPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 147 NRRMCIINGIARD----HKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEG 202
+RR+ + AR+ + KI+DFG A++ G + E + +MA E L
Sbjct: 137 DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHR 196
Query: 203 LFSVKSDVFSFGVLLLEIIS 222
+++ +SDV+S+GV + E+++
Sbjct: 197 IYTHQSDVWSYGVTVWELMT 216
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 93/209 (44%), Gaps = 43/209 (20%)
Query: 50 TRNFSNEN------KLGEGGFGPVYKGVLNDDKEIAV----KRLSRSSGQGLQEFK---N 96
TR+ + E+ +LG+G FG VYK +KE +V K + S + L+++ +
Sbjct: 30 TRDLNPEDFWEIIGELGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEID 86
Query: 97 LIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTR-----SVQLDWNRRMC 151
++A H N+V+ + E+ ++D ++ + R +Q+ + +
Sbjct: 87 ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD 146
Query: 152 IING------IARDHKM---------NPKISDFGMARVFGGNQSEANTNRVVGTYGYMAP 196
+N I RD K + K++DFG++ + + +GT +MAP
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRXIQRRDXFIGTPYWMAP 204
Query: 197 EYAL-----EGLFSVKSDVFSFGVLLLEI 220
E + + + K+DV+S G+ L+E+
Sbjct: 205 EVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 107/291 (36%), Gaps = 71/291 (24%)
Query: 58 KLGEGGFGPVYKGVLNDDK----EIAVKRLSR---SSGQGLQEF---KNLIAKLQHKNLV 107
KLG+G FG V +G + +AVK L S + + +F N + L H+NL+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL---------DFLL----------------FDSTRSV 142
R + E P SL FLL +S R +
Sbjct: 75 RLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 133
Query: 143 QLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSE--ANTNRVVGTYGYMAPEYAL 200
D R ++ RD KI DFG+ R N +R V + + APE
Sbjct: 134 HRDLAARNLLL--ATRDLV---KIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESLK 187
Query: 201 EGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLK 260
FS SD + FGV L E + TY + W N +++ + K
Sbjct: 188 TRTFSHASDTWMFGVTLWE------------------MFTYGQEPWIGLNGSQILHKIDK 229
Query: 261 ESFIL---EELLKRIH-IGLLCVQEDPADRPTMSSVVFMLATDTITLLQPT 307
E L E+ + I+ + + C P DRPT F+ D + QPT
Sbjct: 230 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPT-----FVALRDFLLEAQPT 275
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 38/204 (18%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-----IAVKRL----SRSSGQGLQEFKNLIAKLQ 102
F LG G FG VYKG+ + E +A+ L S + + + + ++A +
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 103 HKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ--------LDW-------- 146
+ ++ R I + MP L D R + L+W
Sbjct: 110 NPHVCRLLGICLTSTVQL-ITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGM 164
Query: 147 ----NRRMCIINGIARD----HKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEY 198
+RR+ + AR+ + KI+DFG+A++ G + E + +MA E
Sbjct: 165 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 224
Query: 199 ALEGLFSVKSDVFSFGVLLLEIIS 222
L +++ +SDV+S+GV + E+++
Sbjct: 225 ILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 114/276 (41%), Gaps = 63/276 (22%)
Query: 59 LGEGGFGPVYKGVLNDDK----EIAVKRLSRSSGQGLQE-FKN---LIAKLQHKNLVRXX 110
LGEG FG VY+GV + K +AVK + +E F + ++ L H ++V+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 111 XXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLD----WNRRMC-------IINGIARD 159
I E P L L + S+++ ++ ++C IN + RD
Sbjct: 76 GIIEEEPTWI-IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRD 134
Query: 160 HKM------NP---KISDFGMAR-VFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSD 209
+ +P K+ DFG++R + + +A+ R+ +M+PE F+ SD
Sbjct: 135 IAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINFRRFTTASD 192
Query: 210 VFSFGVLLLEIISGRKDTRFYL--------YEQGQSLLTYTWKLWCEGNAQELMDPVLKE 261
V+ F V + EI+S K F+L E+G L +L PVL
Sbjct: 193 VWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRL-----------PKPDLCPPVLY- 240
Query: 262 SFILEELLKRIHIGLLCVQEDPADRPTMSSVVFMLA 297
L+ R C DP+DRP + +V L+
Sbjct: 241 -----TLMTR------CWDYDPSDRPRFTELVCSLS 265
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGR 224
K+ DFG++ G ++ N VGT YM+PE +SV+SD++S G+ L+E+ GR
Sbjct: 172 KLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 31/204 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAKL 101
+ NF K+GEG +G VYK E +A+K++ + ++E +L+ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKEL 60
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARD 159
H N+V+ + E++ F+ + + L + ++ G+A
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 160 HK-------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
H + P K++DFG+AR F G + VV T Y APE L
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 178
Query: 202 -GLFSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGR 224
K+ DFG++ G ++ N VGT YM+PE +SV+SD++S G+ L+E+ GR
Sbjct: 207 KLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 114/276 (41%), Gaps = 63/276 (22%)
Query: 59 LGEGGFGPVYKGVLNDDK----EIAVKRLSRSSGQGLQE-FKN---LIAKLQHKNLVRXX 110
LGEG FG VY+GV + K +AVK + +E F + ++ L H ++V+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 111 XXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLD----WNRRMC-------IINGIARD 159
I E P L L + S+++ ++ ++C IN + RD
Sbjct: 80 GIIEEEPTWI-IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRD 138
Query: 160 HKM------NP---KISDFGMAR-VFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSD 209
+ +P K+ DFG++R + + +A+ R+ +M+PE F+ SD
Sbjct: 139 IAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINFRRFTTASD 196
Query: 210 VFSFGVLLLEIISGRKDTRFYL--------YEQGQSLLTYTWKLWCEGNAQELMDPVLKE 261
V+ F V + EI+S K F+L E+G L +L PVL
Sbjct: 197 VWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRL-----------PKPDLCPPVLY- 244
Query: 262 SFILEELLKRIHIGLLCVQEDPADRPTMSSVVFMLA 297
L+ R C DP+DRP + +V L+
Sbjct: 245 -----TLMTR------CWDYDPSDRPRFTELVCSLS 269
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 31/204 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAKL 101
+ NF K+GEG +G VYK E +A+K++ + ++E +L+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKEL 62
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARD 159
H N+V+ + E++ F+ + + L + ++ G+A
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 160 HK-------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
H + P K++DFG+AR F G + VV T Y APE L
Sbjct: 123 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 180
Query: 202 -GLFSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 114/276 (41%), Gaps = 63/276 (22%)
Query: 59 LGEGGFGPVYKGVLNDDK----EIAVKRLSRSSGQGLQE-FKN---LIAKLQHKNLVRXX 110
LGEG FG VY+GV + K +AVK + +E F + ++ L H ++V+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 111 XXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLD----WNRRMC-------IINGIARD 159
I E P L L + S+++ ++ ++C IN + RD
Sbjct: 92 GIIEEEPTWI-IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRD 150
Query: 160 HKM------NP---KISDFGMAR-VFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSD 209
+ +P K+ DFG++R + + +A+ R+ +M+PE F+ SD
Sbjct: 151 IAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINFRRFTTASD 208
Query: 210 VFSFGVLLLEIISGRKDTRFYL--------YEQGQSLLTYTWKLWCEGNAQELMDPVLKE 261
V+ F V + EI+S K F+L E+G L +L PVL
Sbjct: 209 VWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRL-----------PKPDLCPPVLY- 256
Query: 262 SFILEELLKRIHIGLLCVQEDPADRPTMSSVVFMLA 297
L+ R C DP+DRP + +V L+
Sbjct: 257 -----TLMTR------CWDYDPSDRPRFTELVCSLS 281
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGR 224
K+ DFG++ G ++ N VGT YM+PE +SV+SD++S G+ L+E+ GR
Sbjct: 145 KLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 87/196 (44%), Gaps = 37/196 (18%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLS-RSSGQGLQEFK----NLIAKLQHKNLVRXXXX 112
K+GEG +G VYK N + A+K++ +G+ +++ +L+H N+V+
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 113 XXXXXXXXXICEYMPNKSLDFLL------FDSTRSVQLDWNRRMCIINGIARDH------ 160
+ E++ ++ L LL +S + + ++NGIA H
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSF----LLQLLNGIAYCHDRRVLH 123
Query: 161 -KMNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYAL-EGLFSVK 207
+ P KI+DFG+AR F G T+ +V T Y AP+ + +S
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEIV-TLWYRAPDVLMGSKKYSTT 181
Query: 208 SDVFSFGVLLLEIISG 223
D++S G + E+++G
Sbjct: 182 IDIWSVGCIFAEMVNG 197
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 85/200 (42%), Gaps = 24/200 (12%)
Query: 46 IHEATRNFSNENKLGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKNLIAKL--- 101
+ + + ++ K+G+G G VY + + +E+A+++++ + N I +
Sbjct: 16 VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN 75
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRRMC--------- 151
++ N+V + EY+ SL D + Q+ R C
Sbjct: 76 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHS 135
Query: 152 ---IINGIARDHKM-----NPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGL 203
I I D+ + + K++DFG QS+ +T +VGT +MAPE
Sbjct: 136 NQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKA 193
Query: 204 FSVKSDVFSFGVLLLEIISG 223
+ K D++S G++ +E+I G
Sbjct: 194 YGPKVDIWSLGIMAIEMIEG 213
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Query: 166 ISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVF------SFGVLLLE 219
I+DFG+A F +S +T+ VGT YMAPE LEG + + D F + G++L E
Sbjct: 172 IADFGLALKFEAGKSAGDTHGQVGTRRYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWE 230
Query: 220 IIS 222
+ S
Sbjct: 231 LAS 233
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGR 224
K+ DFG++ G ++ N VGT YM+PE +SV+SD++S G+ L+E+ GR
Sbjct: 164 KLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 36/58 (62%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KI+DFG+A++ G + E + +MA E L +++ +SDV+S+GV + E+++
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGR 224
K+ DFG++ G ++ N VGT YM+PE +SV+SD++S G+ L+E+ GR
Sbjct: 145 KLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 27/195 (13%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDKEIAVKRL-----SRSSGQGLQEFKNLIAKLQHKNLV 107
F+ ++G+G FG V+KG+ N +++ ++ + + +Q+ ++++ +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 108 RXXXXXXXXXXXXXICEYMPNKS-LDFLLFDSTRSVQLDWNRRMCIING---------IA 157
+ I EY+ S LD L Q+ + I+ G I
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKE-ILKGLDYLHSEKKIH 143
Query: 158 RDHKM---------NPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKS 208
RD K + K++DFG+A Q + NT VGT +MAPE + + K+
Sbjct: 144 RDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIQQSAYDSKA 201
Query: 209 DVFSFGVLLLEIISG 223
D++S G+ +E+ G
Sbjct: 202 DIWSLGITAIELAKG 216
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 31/204 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSS------GQGLQEFKNLIAKL 101
+ NF K+GEG +G VYK E +A+K++ + ++E +L+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLKEL 62
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARD 159
H N+V+ + E++ F+ + + L + ++ G+A
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 160 HK-------MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
H + P K++DFG+AR F G + VV T Y APE L
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 180
Query: 202 -GLFSVKSDVFSFGVLLLEIISGR 224
+S D++S G + E+++ R
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGR 224
K+ DFG++ G ++ N VGT YM+PE +SV+SD++S G+ L+E+ GR
Sbjct: 145 KLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 95/227 (41%), Gaps = 39/227 (17%)
Query: 29 GKKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKGVLNDDKE-----IAVKRL 83
G + S E P L I + T F L G FG VYKG+ + E +A+K L
Sbjct: 1 GAMGIRSGEAPNQALLRILKET-EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKEL 59
Query: 84 ----SRSSGQGLQEFKNLIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDST 139
S + + + + ++A + + ++ R I + MP L D
Sbjct: 60 REATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCL----LDYV 114
Query: 140 RSVQ--------LDW------------NRRMCIINGIARD----HKMNPKISDFGMARVF 175
R + L+W +RR+ + AR+ + KI+DFG+A++
Sbjct: 115 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 174
Query: 176 GGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
G + E + +MA E L +++ +SDV+S+GV + E+++
Sbjct: 175 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 32/138 (23%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS-G 223
KI DFG+AR + + +MAPE +++ +SDV+S+G+ L E+ S G
Sbjct: 208 KICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLG 267
Query: 224 RK-------DTRFY-LYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFILEELLKRIHIG 275
D++FY + ++G +L+ E E+ D ++K
Sbjct: 268 SSPYPGMPVDSKFYKMIKEGFRMLS------PEHAPAEMYD-IMKT-------------- 306
Query: 276 LLCVQEDPADRPTMSSVV 293
C DP RPT +V
Sbjct: 307 --CWDADPLKRPTFKQIV 322
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGR 224
K+ DFG++ G ++ N VGT YM+PE +SV+SD++S G+ L+E+ GR
Sbjct: 145 KLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGR 224
K+ DFG++ G ++ N VGT YM+PE +SV+SD++S G+ L+E+ GR
Sbjct: 145 KLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 36/58 (62%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KI+DFG+A++ G + E + +MA E L +++ +SDV+S+GV + E+++
Sbjct: 164 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 32/143 (22%)
Query: 160 HKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLE 219
H KI DFG+AR + + +MAPE +++ +SDV+S+G+ L E
Sbjct: 198 HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWE 257
Query: 220 IIS-GRK-------DTRFY-LYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFILEELLK 270
+ S G D++FY + ++G +L+ E E+ D
Sbjct: 258 LFSLGSSPYPGMPVDSKFYKMIKEGFRMLS------PEHAPAEMYD-------------- 297
Query: 271 RIHIGLLCVQEDPADRPTMSSVV 293
I C DP RPT +V
Sbjct: 298 ---IMKTCWDADPLKRPTFKQIV 317
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 57/138 (41%), Gaps = 32/138 (23%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS-G 223
KI DFG+AR + + +MAPE +++ +SDV+S+G+ L E+ S G
Sbjct: 201 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLG 260
Query: 224 RK-------DTRFY-LYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFILEELLKRIHIG 275
D++FY + ++G +L+ E E+ D I
Sbjct: 261 SSPYPGMPVDSKFYKMIKEGFRMLS------PEHAPAEMYD-----------------IM 297
Query: 276 LLCVQEDPADRPTMSSVV 293
C DP RPT +V
Sbjct: 298 KTCWDADPLKRPTFKQIV 315
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 57/138 (41%), Gaps = 32/138 (23%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS-G 223
KI DFG+AR + + +MAPE +++ +SDV+S+G+ L E+ S G
Sbjct: 208 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLG 267
Query: 224 RK-------DTRFY-LYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFILEELLKRIHIG 275
D++FY + ++G +L+ E E+ D I
Sbjct: 268 SSPYPGMPVDSKFYKMIKEGFRMLS------PEHAPAEMYD-----------------IM 304
Query: 276 LLCVQEDPADRPTMSSVV 293
C DP RPT +V
Sbjct: 305 KTCWDADPLKRPTFKQIV 322
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 70/140 (50%), Gaps = 25/140 (17%)
Query: 165 KISDFGMARVFGGNQSEANTNRV----VGTYGYMAPEYALEGL--FSVKSDVFSFGVLLL 218
+I+DFG++ F + N+V VGT +MAPE +E + + K+D++SFG+ +
Sbjct: 161 QIADFGVS-AFLATGGDITRNKVRKTFVGTPCWMAPE-VMEQVRGYDFKADIWSFGITAI 218
Query: 219 EIISGRKDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFILEELLKRIHIGL-- 276
E+ +G ++ Y + L+ L + + P L+ +E+LK+
Sbjct: 219 ELATGA--APYHKYPPMKVLM-----LTLQNDP-----PSLETGVQDKEMLKKYGKSFRK 266
Query: 277 ---LCVQEDPADRPTMSSVV 293
LC+Q+DP RPT + ++
Sbjct: 267 MISLCLQKDPEKRPTAAELL 286
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGR 224
K+ DFG++ G + N VGT YM+PE +SV+SD++S G+ L+E+ GR
Sbjct: 148 KLCDFGVS----GQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 32/143 (22%)
Query: 160 HKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLE 219
H KI DFG+AR + + +MAPE +++ +SDV+S+G+ L E
Sbjct: 180 HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWE 239
Query: 220 IIS-GRK-------DTRFY-LYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFILEELLK 270
+ S G D++FY + ++G +L+ E E+ D ++K
Sbjct: 240 LFSLGSSPYPGMPVDSKFYKMIKEGFRMLS------PEHAPAEMYD-IMKT--------- 283
Query: 271 RIHIGLLCVQEDPADRPTMSSVV 293
C DP RPT +V
Sbjct: 284 -------CWDADPLKRPTFKQIV 299
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 70/140 (50%), Gaps = 25/140 (17%)
Query: 165 KISDFGMARVFGGNQSEANTNRV----VGTYGYMAPEYALEGL--FSVKSDVFSFGVLLL 218
+I+DFG++ F + N+V VGT +MAPE +E + + K+D++SFG+ +
Sbjct: 156 QIADFGVS-AFLATGGDITRNKVRKTFVGTPCWMAPE-VMEQVRGYDFKADIWSFGITAI 213
Query: 219 EIISGRKDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFILEELLKRIHIGL-- 276
E+ +G ++ Y + L+ L + + P L+ +E+LK+
Sbjct: 214 ELATGA--APYHKYPPMKVLM-----LTLQNDP-----PSLETGVQDKEMLKKYGKSFRK 261
Query: 277 ---LCVQEDPADRPTMSSVV 293
LC+Q+DP RPT + ++
Sbjct: 262 MISLCLQKDPEKRPTAAELL 281
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 81/201 (40%), Gaps = 39/201 (19%)
Query: 56 ENKLGEGGFGPVYKGVLN----DDKEIAVKRLSRS-SGQGLQEF---KNLIAKLQHKNLV 107
E +G G FG V G L D +A+K L + + ++F +++ + H N+V
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 108 RXXXXXXXXXXXXXICEYMPNKSLDFLL--FDSTRSV------------------QLDWN 147
+ E+M N +LD L D +V + +
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYV 167
Query: 148 RRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYG------YMAPEYALE 201
R I + + K+SDFG++RV E + V T G + APE
Sbjct: 168 HRDLAARNILVNSNLVCKVSDFGLSRVI-----EDDPEAVYTTTGGKIPVRWTAPEAIQY 222
Query: 202 GLFSVKSDVFSFGVLLLEIIS 222
F+ SDV+S+G+++ E++S
Sbjct: 223 RKFTSASDVWSYGIVMWEVMS 243
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 46 IHEATRNFSNENKLGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKNLIAKL--- 101
+ + + ++ K+G+G G VY + + +E+A+++++ + N I +
Sbjct: 15 VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN 74
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRRMCII------- 153
++ N+V + EY+ SL D + Q+ R C+
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHS 134
Query: 154 -NGIARDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGL 203
I RD K + K++DFG QS+ + +VGT +MAPE
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSEMVGTPYWMAPEVVTRKA 192
Query: 204 FSVKSDVFSFGVLLLEIISG 223
+ K D++S G++ +E+I G
Sbjct: 193 YGPKVDIWSLGIMAIEMIEG 212
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 84/195 (43%), Gaps = 31/195 (15%)
Query: 57 NKLGEGGFGPVYKGVLN-DDKEIAVK--RLSRSSGQGLQEFK--NLIAKLQHKNLVRXXX 111
+KLGEG + VYKG D +A+K RL G + +L+ L+H N+V
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 112 XXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC---IINGIARDHK------- 161
+ EY+ +K L L D + + N ++ ++ G+A H+
Sbjct: 68 IIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMH-NVKLFLFQLLRGLAYCHRQKVLHRD 125
Query: 162 MNP-----------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGL-FSVKSD 209
+ P K++DFG+AR ++ N VV T Y P+ L +S + D
Sbjct: 126 LKPQNLLINERGELKLADFGLARA-KSIPTKTYDNEVV-TLWYRPPDILLGSTDYSTQID 183
Query: 210 VFSFGVLLLEIISGR 224
++ G + E+ +GR
Sbjct: 184 MWGVGCIFYEMATGR 198
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 102/276 (36%), Gaps = 66/276 (23%)
Query: 58 KLGEGGFGPVYKGVLNDDK----EIAVKRLSR---SSGQGLQEF---KNLIAKLQHKNLV 107
KLG+G FG V +G + +AVK L S + + +F N + L H+NL+
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL---------DFLL----------------FDSTRSV 142
R + E P SL FLL +S R +
Sbjct: 79 RLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 137
Query: 143 QLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSE--ANTNRVVGTYGYMAPEYAL 200
D R ++ RD KI DFG+ R N +R V + + APE
Sbjct: 138 HRDLAARNLLL--ATRDLV---KIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESLK 191
Query: 201 EGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLK 260
FS SD + FGV L E + TY + W N +++ + K
Sbjct: 192 TRTFSHASDTWMFGVTLWE------------------MFTYGQEPWIGLNGSQILHKIDK 233
Query: 261 ESFIL---EELLKRIH-IGLLCVQEDPADRPTMSSV 292
E L E+ + I+ + + C P DRPT ++
Sbjct: 234 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 269
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 46 IHEATRNFSNENKLGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKNLIAKL--- 101
+ + + ++ K+G+G G VY + + +E+A+++++ + N I +
Sbjct: 15 VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN 74
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRRMCII------- 153
++ N+V + EY+ SL D + Q+ R C+
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHS 134
Query: 154 -NGIARDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGL 203
I RD K + K++DFG QS+ + +VGT +MAPE
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSX--MVGTPYWMAPEVVTRKA 192
Query: 204 FSVKSDVFSFGVLLLEIISG 223
+ K D++S G++ +E+I G
Sbjct: 193 YGPKVDIWSLGIMAIEMIEG 212
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 102/276 (36%), Gaps = 66/276 (23%)
Query: 58 KLGEGGFGPVYKGVLNDDK----EIAVKRLSR---SSGQGLQEF---KNLIAKLQHKNLV 107
KLG+G FG V +G + +AVK L S + + +F N + L H+NL+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL---------DFLL----------------FDSTRSV 142
R + E P SL FLL +S R +
Sbjct: 75 RLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 133
Query: 143 QLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSE--ANTNRVVGTYGYMAPEYAL 200
D R ++ RD KI DFG+ R N +R V + + APE
Sbjct: 134 HRDLAARNLLL--ATRDLV---KIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESLK 187
Query: 201 EGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLK 260
FS SD + FGV L E + TY + W N +++ + K
Sbjct: 188 TRTFSHASDTWMFGVTLWE------------------MFTYGQEPWIGLNGSQILHKIDK 229
Query: 261 ESFIL---EELLKRIH-IGLLCVQEDPADRPTMSSV 292
E L E+ + I+ + + C P DRPT ++
Sbjct: 230 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 265
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 46 IHEATRNFSNENKLGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKNLIAKL--- 101
+ + + ++ K+G+G G VY + + +E+A+++++ + N I +
Sbjct: 16 VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN 75
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQLDWNRRMCII------- 153
++ N+V + EY+ SL D + Q+ R C+
Sbjct: 76 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHS 135
Query: 154 -NGIARDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGL 203
I RD K + K++DFG QS+ + +VGT +MAPE
Sbjct: 136 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSX--MVGTPYWMAPEVVTRKA 193
Query: 204 FSVKSDVFSFGVLLLEIISG 223
+ K D++S G++ +E+I G
Sbjct: 194 YGPKVDIWSLGIMAIEMIEG 213
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTY--GYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KISDFG+++ G + S T R G + + APE FS +SDV+S+GV + E +S
Sbjct: 476 KISDFGLSKALGADDS-YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTY--GYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KISDFG+++ G + S T R G + + APE FS +SDV+S+GV + E +S
Sbjct: 150 KISDFGLSKALGADDS-YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
KI D G A+ +Q E T VGT Y+APE + ++V D +SFG L E I+G
Sbjct: 165 KIIDLGYAKEL--DQGELCTE-FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
KI D G A+ +Q E T VGT Y+APE + ++V D +SFG L E I+G
Sbjct: 164 KIIDLGYAKEL--DQGELCTE-FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 37/58 (63%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KI+DFG+AR+ +++E + + +MA E L F+ +SDV+S+GV + E+++
Sbjct: 159 KITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 79/214 (36%), Gaps = 53/214 (24%)
Query: 59 LGEGGFGPVYKGVLN-DDKEIAVKRL-----SRSSGQGLQEFKNLIAKLQHKNLVRXXXX 112
LG GGFG V++ DD A+KR+ + + ++E K L AKL+H +VR
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKAL-AKLEHPGIVRYFNA 71
Query: 113 XXXXXXXXXICEYMPNKSLDFLLFDSTRSVQL-DWNRRMCIINGIARD------------ 159
+ P L ++ R L DW C I R
Sbjct: 72 WLEKNTTEKLQPSSPKVYL-YIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEA 130
Query: 160 ----------HK-MNP-----------KISDFGMARVFGGNQSE----------ANTNRV 187
H+ + P K+ DFG+ ++ E A
Sbjct: 131 VEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQ 190
Query: 188 VGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEII 221
VGT YM+PE +S K D+FS G++L E++
Sbjct: 191 VGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Query: 166 ISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVF------SFGVLLLE 219
++DFG+A F + +T+ VGT YMAPE LEG + + D F + G++L E
Sbjct: 164 LADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWE 222
Query: 220 IIS 222
++S
Sbjct: 223 LVS 225
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
Query: 165 KISDFGMARVFGGNQSEANTNR--VVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
K+SDFG F S+ R +VGT +MAPE L++ + D++S G++++E++
Sbjct: 181 KLSDFG----FCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVD 236
Query: 223 G 223
G
Sbjct: 237 G 237
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 153 INGIARDHKMNPKISDFGMAR--VFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDV 210
++ + D + + KI+DFGM + ++ G T GT Y+APE + D
Sbjct: 470 LDNVMLDSEGHIKIADFGMCKENIWDG----VTTKXFCGTPDYIAPEIIAYQPYGKSVDW 525
Query: 211 FSFGVLLLEIISGR 224
++FGVLL E+++G+
Sbjct: 526 WAFGVLLYEMLAGQ 539
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGV 215
I D + +ISD G+A Q+ VGT GYMAPE ++ D ++ G
Sbjct: 317 ILLDDHGHIRISDLGLAVHVPEGQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGC 373
Query: 216 LLLEIISGR 224
LL E+I+G+
Sbjct: 374 LLYEMIAGQ 382
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 107/260 (41%), Gaps = 50/260 (19%)
Query: 9 REGRTGXXXXXEGYSYSILRGKKKVESQ-------ELPLFPLDLIHE-------ATRNFS 54
++ R+G E +S + L + V+S+ ++P P H A +F
Sbjct: 30 QDSRSGHNEAKEVWSNADLTERMPVKSKRTSALAVDIPAPPAPFDHRIVTAKQGAVNSFY 89
Query: 55 NENK---LGEGGFGPVYKGVLNDDK-EIAVKRLSRSSGQGLQEFKNLIA---KLQHKNLV 107
+K LG G FG V+K ++A K + + +E KN I+ +L H NL+
Sbjct: 90 TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLI 149
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQLD---WNRRMCIINGIARDHKM- 162
+ + EY+ L D ++ +S +LD + +++C GI H+M
Sbjct: 150 QLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQIC--EGIRHMHQMY 207
Query: 163 -------------------NPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGL 203
KI DFG+AR + + + N GT ++APE
Sbjct: 208 ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE-KLKVN--FGTPEFLAPEVVNYDF 264
Query: 204 FSVKSDVFSFGVLLLEIISG 223
S +D++S GV+ ++SG
Sbjct: 265 VSFPTDMWSVGVIAYMLLSG 284
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGV 215
I D + +ISD G+A Q+ VGT GYMAPE ++ D ++ G
Sbjct: 317 ILLDDHGHIRISDLGLAVHVPEGQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGC 373
Query: 216 LLLEIISGR 224
LL E+I+G+
Sbjct: 374 LLYEMIAGQ 382
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 86/200 (43%), Gaps = 31/200 (15%)
Query: 52 NFSNENKLGEGGFGPV---YKGVLNDD---KEIAVKRLSRSSGQGLQEFK-NLIAKLQHK 104
N+ LGEG FG V Y K I K L++S QG E + + + L+H
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 105 NLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ------------LDWNRRMCI 152
++++ + EY N+ D+++ S Q +++ R I
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 124
Query: 153 IN------GIARDHKMNPKISDFGMARVF-GGNQSEANTNRVVGTYGYMAPEYALEGLFS 205
++ + D +N KI+DFG++ + GN + + G+ Y APE L++
Sbjct: 125 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----GSPNYAAPEVISGKLYA 180
Query: 206 -VKSDVFSFGVLLLEIISGR 224
+ DV+S GV+L ++ R
Sbjct: 181 GPEVDVWSCGVILYVMLCRR 200
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 89/217 (41%), Gaps = 48/217 (22%)
Query: 44 DLIHEATRNFSNENKLGEGGFGPVYKG--VLNDDKEIAVKRLSRSSGQ------GLQEFK 95
D + A + + ++GEG +G V+K + N + +A+KR+ +G+ ++E
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 96 NL--IAKLQHKNLVR-----XXXXXXXXXXXXXICEYM----------------PNKSLD 132
L + +H N+VR + E++ P +++
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK 123
Query: 133 FLLFDSTRSVQLDWNRRMCIINGIARDHKMNP---------KISDFGMARVFGGNQSEAN 183
++F R + + R+ + RD K K++DFG+AR++ +
Sbjct: 124 DMMFQLLRGLDFLHSHRV-----VHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--- 175
Query: 184 TNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEI 220
VV T Y APE L+ ++ D++S G + E+
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 89/217 (41%), Gaps = 48/217 (22%)
Query: 44 DLIHEATRNFSNENKLGEGGFGPVYKG--VLNDDKEIAVKRLSRSSGQ------GLQEFK 95
D + A + + ++GEG +G V+K + N + +A+KR+ +G+ ++E
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 96 NL--IAKLQHKNLVR-----XXXXXXXXXXXXXICEYM----------------PNKSLD 132
L + +H N+VR + E++ P +++
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK 123
Query: 133 FLLFDSTRSVQLDWNRRMCIINGIARDHKMNP---------KISDFGMARVFGGNQSEAN 183
++F R + + R+ + RD K K++DFG+AR++ +
Sbjct: 124 DMMFQLLRGLDFLHSHRV-----VHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--- 175
Query: 184 TNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEI 220
VV T Y APE L+ ++ D++S G + E+
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 85/192 (44%), Gaps = 31/192 (16%)
Query: 58 KLGEGGFGPVYKGVLNDDKEI-AVKRLSRSSGQGLQEF---KNLIAKLQHKNLVRXXXXX 113
+LG+G FG VYK + + A K + S + L+++ ++A H +V+
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 114 XXXXXXXXICEYMPNKSLDFLLFDSTR-----SVQLDWNRRMCIING------IARDHKM 162
+ E+ P ++D ++ + R +Q+ + + +N I RD K
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKA 137
Query: 163 ---------NPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYAL-----EGLFSVKS 208
+ +++DFG++ ++ + +GT +MAPE + + + K+
Sbjct: 138 GNVLMTLEGDIRLADFGVSA--KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKA 195
Query: 209 DVFSFGVLLLEI 220
D++S G+ L+E+
Sbjct: 196 DIWSLGITLIEM 207
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 36/210 (17%)
Query: 43 LDLIHEATRNFSNENKLGEGGFGPVYKGV-LNDDKEIAVKRLS---RSSGQ------GLQ 92
LD+ A R + + LGEG F VYK N ++ +A+K++ RS + L+
Sbjct: 3 LDVKSRAKR-YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALR 61
Query: 93 EFKNLIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ--------- 143
E K L+ +L H N++ + ++M L+ ++ D++ +
Sbjct: 62 EIK-LLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYML 119
Query: 144 -----LDWNRRMCII------NGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYG 192
L++ + I+ N + D K++DFG+A+ F G+ + A ++VV T
Sbjct: 120 MTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSF-GSPNRAYXHQVV-TRW 177
Query: 193 YMAPEYALEG-LFSVKSDVFSFGVLLLEII 221
Y APE ++ V D+++ G +L E++
Sbjct: 178 YRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 153 INGIARDHKMNPKISDFGMAR--VFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDV 210
++ + D + + KI+DFGM + ++ G T GT Y+APE + D
Sbjct: 149 LDNVMLDSEGHIKIADFGMCKENIWDG----VTTKXFCGTPDYIAPEIIAYQPYGKSVDW 204
Query: 211 FSFGVLLLEIISGR 224
++FGVLL E+++G+
Sbjct: 205 WAFGVLLYEMLAGQ 218
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 31/200 (15%)
Query: 52 NFSNENKLGEGGFGPV---YKGVLNDD---KEIAVKRLSRSSGQG-LQEFKNLIAKLQHK 104
N+ LGEG FG V Y K I K L++S QG ++ + + L+H
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 105 NLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ------------LDWNRRMCI 152
++++ + EY N+ D+++ S Q +++ R I
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 128
Query: 153 IN------GIARDHKMNPKISDFGMARVF-GGNQSEANTNRVVGTYGYMAPEYALEGLFS 205
++ + D +N KI+DFG++ + GN + + G+ Y APE L++
Sbjct: 129 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----GSPNYAAPEVISGKLYA 184
Query: 206 -VKSDVFSFGVLLLEIISGR 224
+ DV+S GV+L ++ R
Sbjct: 185 GPEVDVWSCGVILYVMLCRR 204
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 86/200 (43%), Gaps = 31/200 (15%)
Query: 52 NFSNENKLGEGGFGPV---YKGVLNDD---KEIAVKRLSRSSGQGLQEFK-NLIAKLQHK 104
N+ LGEG FG V Y K I K L++S QG E + + + L+H
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 105 NLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ------------LDWNRRMCI 152
++++ + EY N+ D+++ S Q +++ R I
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 134
Query: 153 IN------GIARDHKMNPKISDFGMARVF-GGNQSEANTNRVVGTYGYMAPEYALEGLFS 205
++ + D +N KI+DFG++ + GN + + G+ Y APE L++
Sbjct: 135 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----GSPNYAAPEVISGKLYA 190
Query: 206 -VKSDVFSFGVLLLEIISGR 224
+ DV+S GV+L ++ R
Sbjct: 191 GPEVDVWSCGVILYVMLCRR 210
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 89/217 (41%), Gaps = 48/217 (22%)
Query: 44 DLIHEATRNFSNENKLGEGGFGPVYKG--VLNDDKEIAVKRLSRSSGQ------GLQEFK 95
D + A + + ++GEG +G V+K + N + +A+KR+ +G+ ++E
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 96 NL--IAKLQHKNLVR-----XXXXXXXXXXXXXICEYM----------------PNKSLD 132
L + +H N+VR + E++ P +++
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK 123
Query: 133 FLLFDSTRSVQLDWNRRMCIINGIARDHKMNP---------KISDFGMARVFGGNQSEAN 183
++F R + + R+ + RD K K++DFG+AR++ +
Sbjct: 124 DMMFQLLRGLDFLHSHRV-----VHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--- 175
Query: 184 TNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEI 220
VV T Y APE L+ ++ D++S G + E+
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 85/192 (44%), Gaps = 31/192 (16%)
Query: 58 KLGEGGFGPVYKGVLNDDKEI-AVKRLSRSSGQGLQEF---KNLIAKLQHKNLVRXXXXX 113
+LG+G FG VYK + + A K + S + L+++ ++A H +V+
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 114 XXXXXXXXICEYMPNKSLDFLLFDSTR-----SVQLDWNRRMCIING------IARDHKM 162
+ E+ P ++D ++ + R +Q+ + + +N I RD K
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKA 145
Query: 163 ---------NPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYAL-----EGLFSVKS 208
+ +++DFG++ ++ + +GT +MAPE + + + K+
Sbjct: 146 GNVLMTLEGDIRLADFGVSA--KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKA 203
Query: 209 DVFSFGVLLLEI 220
D++S G+ L+E+
Sbjct: 204 DIWSLGITLIEM 215
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 86/200 (43%), Gaps = 31/200 (15%)
Query: 52 NFSNENKLGEGGFGPV---YKGVLNDD---KEIAVKRLSRSSGQGLQEFK-NLIAKLQHK 104
N+ LGEG FG V Y K I K L++S QG E + + + L+H
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 105 NLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQ------------LDWNRRMCI 152
++++ + EY N+ D+++ S Q +++ R I
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 133
Query: 153 IN------GIARDHKMNPKISDFGMARVF-GGNQSEANTNRVVGTYGYMAPEYALEGLFS 205
++ + D +N KI+DFG++ + GN + + G+ Y APE L++
Sbjct: 134 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----GSPNYAAPEVISGKLYA 189
Query: 206 -VKSDVFSFGVLLLEIISGR 224
+ DV+S GV+L ++ R
Sbjct: 190 GPEVDVWSCGVILYVMLCRR 209
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 10/70 (14%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYG-----YMAPEYALEGLFSVKSDVFSFGVLLLE 219
KISDFG+++ +++ T+G + APE FS KSDV+SFGVL+ E
Sbjct: 151 KISDFGLSKALRADENXYKAQ----THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 206
Query: 220 IIS-GRKDTR 228
S G+K R
Sbjct: 207 AFSYGQKPYR 216
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 81/197 (41%), Gaps = 38/197 (19%)
Query: 59 LGEGGFGPVYKGVLNDDKE-----IAVKRLSRSSG----QGLQEFKNLIAKLQHKNLVRX 109
LG G FG V+KGV + E + +K + SG Q + + I L H ++VR
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 110 XXXXXXXXXXXXICEYMPNKSLDFLLFDSTRS--------VQLDWNRRMCIINGIARDHK 161
+ +Y+P SL D R + L+W ++ +H
Sbjct: 81 LGLCPGSSLQL-VTQYLPLGSL----LDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG 135
Query: 162 M-------------NP---KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFS 205
M +P +++DFG+A + + + + +MA E G ++
Sbjct: 136 MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYT 195
Query: 206 VKSDVFSFGVLLLEIIS 222
+SDV+S+GV + E+++
Sbjct: 196 HQSDVWSYGVTVWELMT 212
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 81/194 (41%), Gaps = 32/194 (16%)
Query: 58 KLGEGGFGPVYKGVLNDDKEI-AVKRLSRSSGQ------GLQEFKNLIAKLQHKNLVRXX 110
K+GEG +G V+K D +I A+K+ S L+E + ++ +L+H NLV
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIR-MLKQLKHPNLVNLL 68
Query: 111 XXXXXXXXXXXICEY---------------MPNKSLDFLLFDSTRSVQLDWNRRMCIING 155
+ EY +P + + + + ++V ++ CI
Sbjct: 69 EVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNF-CHKHNCIHRD 127
Query: 156 IARDHKMNP-----KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYAL-EGLFSVKSD 209
+ ++ + K+ DFG AR+ G + V T Y +PE + + + D
Sbjct: 128 VKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE--VATRWYRSPELLVGDTQYGPPVD 185
Query: 210 VFSFGVLLLEIISG 223
V++ G + E++SG
Sbjct: 186 VWAIGCVFAELLSG 199
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 81/197 (41%), Gaps = 38/197 (19%)
Query: 59 LGEGGFGPVYKGVLNDDKE-----IAVKRLSRSSG----QGLQEFKNLIAKLQHKNLVRX 109
LG G FG V+KGV + E + +K + SG Q + + I L H ++VR
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 110 XXXXXXXXXXXXICEYMPNKSLDFLLFDSTRS--------VQLDWNRRMCIINGIARDHK 161
+ +Y+P SL D R + L+W ++ +H
Sbjct: 99 LGLCPGSSLQL-VTQYLPLGSL----LDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG 153
Query: 162 M-------------NP---KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFS 205
M +P +++DFG+A + + + + +MA E G ++
Sbjct: 154 MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYT 213
Query: 206 VKSDVFSFGVLLLEIIS 222
+SDV+S+GV + E+++
Sbjct: 214 HQSDVWSYGVTVWELMT 230
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 165 KISDFGMARVFGGNQS--EANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KISDFG+++ +++ +A T+ Y APE FS KSDV+SFGVL+ E S
Sbjct: 167 KISDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYYKFSSKSDVWSFGVLMWEAFS 225
Query: 223 -GRKDTR 228
G+K R
Sbjct: 226 YGQKPYR 232
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 165 KISDFGMARVFGGNQS--EANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KISDFG+++ +++ +A T+ Y APE FS KSDV+SFGVL+ E S
Sbjct: 167 KISDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYYKFSSKSDVWSFGVLMWEAFS 225
Query: 223 -GRKDTR 228
G+K R
Sbjct: 226 YGQKPYR 232
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 165 KISDFGMARVFGGNQS--EANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KISDFG+++ +++ +A T+ Y APE FS KSDV+SFGVL+ E S
Sbjct: 165 KISDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYYKFSSKSDVWSFGVLMWEAFS 223
Query: 223 -GRKDTR 228
G+K R
Sbjct: 224 YGQKPYR 230
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGV 215
I D + + K++DFG+++ ++ +A + GT YMAPE S +D +S+GV
Sbjct: 161 ILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FCGTVEYMAPEVVNRQGHSHSADWWSYGV 218
Query: 216 LLLEIISG 223
L+ E+++G
Sbjct: 219 LMFEMLTG 226
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGV 215
I D + + K++DFG+++ ++ +A + GT YMAPE + +D +SFGV
Sbjct: 157 ILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMAPEVVNRRGHTQSADWWSFGV 214
Query: 216 LLLEIISG 223
L+ E+++G
Sbjct: 215 LMFEMLTG 222
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGV 215
I D + + K++DFG+++ ++ +A + GT YMAPE + +D +SFGV
Sbjct: 157 ILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMAPEVVNRRGHTQSADWWSFGV 214
Query: 216 LLLEIISG 223
L+ E+++G
Sbjct: 215 LMFEMLTG 222
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 165 KISDFGMARVFGGNQS--EANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KISDFG+++ +++ +A T+ Y APE FS KSDV+SFGVL+ E S
Sbjct: 157 KISDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYYKFSSKSDVWSFGVLMWEAFS 215
Query: 223 -GRKDTR 228
G+K R
Sbjct: 216 YGQKPYR 222
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGV 215
I D + + K++DFG+++ ++ +A + GT YMAPE + +D +SFGV
Sbjct: 158 ILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMAPEVVNRRGHTQSADWWSFGV 215
Query: 216 LLLEIISG 223
L+ E+++G
Sbjct: 216 LMFEMLTG 223
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 165 KISDFGMARVFGGNQS--EANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KISDFG+++ +++ +A T+ Y APE FS KSDV+SFGVL+ E S
Sbjct: 151 KISDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYYKFSSKSDVWSFGVLMWEAFS 209
Query: 223 -GRKDTR 228
G+K R
Sbjct: 210 YGQKPYR 216
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 165 KISDFGMARVFGGNQS--EANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KISDFG+++ +++ +A T+ Y APE FS KSDV+SFGVL+ E S
Sbjct: 145 KISDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYYKFSSKSDVWSFGVLMWEAFS 203
Query: 223 -GRKDTR 228
G+K R
Sbjct: 204 YGQKPYR 210
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 18/129 (13%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGR 224
KI DFG+A +F +S+ ++ GT YMAPE + + K D++S GV++ +++G
Sbjct: 167 KIIDFGLAELF---KSDEHSTNAAGTALYMAPE-VFKRDVTFKCDIWSAGVVMYFLLTGC 222
Query: 225 KDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFILEELLKRIHIGLLCVQEDPA 284
E+ Q TY E N P+ ++ +LLK++ + +DP
Sbjct: 223 LPFTGTSLEEVQQKATYK-----EPNYAVECRPLTPQAV---DLLKQM------LTKDPE 268
Query: 285 DRPTMSSVV 293
RP+ + V+
Sbjct: 269 RRPSAAQVL 277
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 165 KISDFGMARVFGGNQS--EANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KISDFG+++ +++ +A T+ Y APE FS KSDV+SFGVL+ E S
Sbjct: 147 KISDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYYKFSSKSDVWSFGVLMWEAFS 205
Query: 223 -GRKDTR 228
G+K R
Sbjct: 206 YGQKPYR 212
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
KI DFG++ VF +++ +GT Y+APE L + K DV+S GV+L +++G
Sbjct: 179 KIVDFGLSAVF---ENQKKMKERLGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 165 KISDFGMARVFGGNQS--EANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KISDFG+++ +++ +A T+ Y APE FS KSDV+SFGVL+ E S
Sbjct: 510 KISDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYYKFSSKSDVWSFGVLMWEAFS 568
Query: 223 -GRKDTR 228
G+K R
Sbjct: 569 YGQKPYR 575
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 165 KISDFGMARVFGGNQS--EANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
KISDFG+++ +++ +A T+ Y APE FS KSDV+SFGVL+ E S
Sbjct: 509 KISDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYYKFSSKSDVWSFGVLMWEAFS 567
Query: 223 -GRKDTR 228
G+K R
Sbjct: 568 YGQKPYR 574
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 85/204 (41%), Gaps = 34/204 (16%)
Query: 51 RNFSNENKLGEGGFGPV----YKGVLNDDKE-IAVKRLSRSSG----QGLQEFKNLIAKL 101
R LGEG FG V Y + E +AVK L +G G ++ +++ L
Sbjct: 31 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL 90
Query: 102 QHKNLVRXX--XXXXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQLD-WNRRMCIINGIA 157
H+++++ + EY+P SL D+L S QL + +++C G+A
Sbjct: 91 YHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQIC--EGMA 148
Query: 158 RDHKMN------------------PKISDFGMAR-VFGGNQSEANTNRVVGTYGYMAPEY 198
H + KI DFG+A+ V G++ + APE
Sbjct: 149 YLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPEC 208
Query: 199 ALEGLFSVKSDVFSFGVLLLEIIS 222
E F SDV+SFGV L E+++
Sbjct: 209 LKEYKFYYASDVWSFGVTLYELLT 232
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 75/203 (36%), Gaps = 32/203 (15%)
Query: 51 RNFSNENKLGEGGFGPV----YKGVLNDDKE-IAVKRLSRSSG----QGLQEFKNLIAKL 101
R LGEG FG V Y + E +AVK L G G Q ++ L
Sbjct: 8 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTL 67
Query: 102 QHKNLVRXX--XXXXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQL-------------- 144
H+++V+ + EY+P SL D+L QL
Sbjct: 68 YHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYL 127
Query: 145 ---DWNRRMCIINGIARDHKMNPKISDFGMARVF--GGNQSEANTNRVVGTYGYMAPEYA 199
+ R + D+ KI DFG+A+ G + + Y APE
Sbjct: 128 HAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECL 186
Query: 200 LEGLFSVKSDVFSFGVLLLEIIS 222
E F SDV+SFGV L E+++
Sbjct: 187 KECKFYYASDVWSFGVTLYELLT 209
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 83/195 (42%), Gaps = 28/195 (14%)
Query: 53 FSNENKLGEGGFGPV-YKGVLNDDKEIAVKRLSRSSGQGLQEFKN---LIAKLQHKNLVR 108
N K+GEG G V V + K +AVK++ Q + N ++ QH+N+V
Sbjct: 31 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 90
Query: 109 XXXXXXXXXXXXXICEYMPNKSLDFLLF------DSTRSVQLDWNRRMCIING---IARD 159
+ E++ +L ++ + +V L + + +++ I RD
Sbjct: 91 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 150
Query: 160 ---------HKMNPKISDFGMARVFGGNQSEANTNR--VVGTYGYMAPEYALEGLFSVKS 208
H K+SDFG F S+ R +VGT +MAPE + +
Sbjct: 151 IKSDSILLTHDGRVKLSDFG----FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 206
Query: 209 DVFSFGVLLLEIISG 223
D++S G++++E++ G
Sbjct: 207 DIWSLGIMVIEMVDG 221
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 83/195 (42%), Gaps = 28/195 (14%)
Query: 53 FSNENKLGEGGFGPV-YKGVLNDDKEIAVKRLSRSSGQGLQEFKN---LIAKLQHKNLVR 108
N K+GEG G V V + K +AVK++ Q + N ++ QH+N+V
Sbjct: 22 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 81
Query: 109 XXXXXXXXXXXXXICEYMPNKSLDFLLF------DSTRSVQLDWNRRMCIING---IARD 159
+ E++ +L ++ + +V L + + +++ I RD
Sbjct: 82 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 141
Query: 160 ---------HKMNPKISDFGMARVFGGNQSEANTNR--VVGTYGYMAPEYALEGLFSVKS 208
H K+SDFG F S+ R +VGT +MAPE + +
Sbjct: 142 IKSDSILLTHDGRVKLSDFG----FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 197
Query: 209 DVFSFGVLLLEIISG 223
D++S G++++E++ G
Sbjct: 198 DIWSLGIMVIEMVDG 212
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 89/212 (41%), Gaps = 50/212 (23%)
Query: 56 ENKLGEGGFGPVYKGVLNDD---KEIAVKRLSR-SSGQGLQEFK---NLIAKL-QHKNLV 107
++ +GEG FG V K + D + A+KR+ +S ++F ++ KL H N++
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL-DFL-------------LFDSTRSV----QL----- 144
EY P+ +L DFL + +ST S QL
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 145 DWNRRMCIING---IARD---------HKMNPKISDFGMARVFGGNQSEANTNRVVGTYG 192
D R M ++ I RD KI+DFG++R E + +G
Sbjct: 150 DVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR-----GQEVYVKKTMGRLP 204
Query: 193 --YMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+MA E +++ SDV+S+GVLL EI+S
Sbjct: 205 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 89/212 (41%), Gaps = 50/212 (23%)
Query: 56 ENKLGEGGFGPVYKGVLNDD---KEIAVKRLSR-SSGQGLQEFK---NLIAKL-QHKNLV 107
++ +GEG FG V K + D + A+KR+ +S ++F ++ KL H N++
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL-DFL-------------LFDSTRSV----QL----- 144
EY P+ +L DFL + +ST S QL
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 145 DWNRRMCIING---IARD---------HKMNPKISDFGMARVFGGNQSEANTNRVVGTYG 192
D R M ++ I RD KI+DFG++R E + +G
Sbjct: 140 DVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR-----GQEVYVKKTMGRLP 194
Query: 193 --YMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+MA E +++ SDV+S+GVLL EI+S
Sbjct: 195 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 83/195 (42%), Gaps = 28/195 (14%)
Query: 53 FSNENKLGEGGFGPV-YKGVLNDDKEIAVKRLSRSSGQGLQEFKN---LIAKLQHKNLVR 108
N K+GEG G V V + K +AVK++ Q + N ++ QH+N+V
Sbjct: 33 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 92
Query: 109 XXXXXXXXXXXXXICEYMPNKSLDFLLF------DSTRSVQLDWNRRMCIING---IARD 159
+ E++ +L ++ + +V L + + +++ I RD
Sbjct: 93 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 152
Query: 160 ---------HKMNPKISDFGMARVFGGNQSEANTNR--VVGTYGYMAPEYALEGLFSVKS 208
H K+SDFG F S+ R +VGT +MAPE + +
Sbjct: 153 IKSDSILLTHDGRVKLSDFG----FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 208
Query: 209 DVFSFGVLLLEIISG 223
D++S G++++E++ G
Sbjct: 209 DIWSLGIMVIEMVDG 223
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 75/203 (36%), Gaps = 32/203 (15%)
Query: 51 RNFSNENKLGEGGFGPV----YKGVLNDDKE-IAVKRLSRSSG----QGLQEFKNLIAKL 101
R LGEG FG V Y + E +AVK L G G Q ++ L
Sbjct: 9 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTL 68
Query: 102 QHKNLVRXX--XXXXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQL-------------- 144
H+++V+ + EY+P SL D+L QL
Sbjct: 69 YHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYL 128
Query: 145 ---DWNRRMCIINGIARDHKMNPKISDFGMARVF--GGNQSEANTNRVVGTYGYMAPEYA 199
+ R + D+ KI DFG+A+ G + + Y APE
Sbjct: 129 HAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECL 187
Query: 200 LEGLFSVKSDVFSFGVLLLEIIS 222
E F SDV+SFGV L E+++
Sbjct: 188 KECKFYYASDVWSFGVTLYELLT 210
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 154 NGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPE----YALEGLFSVKSD 209
+ I D N K+ DFG++ G R G YMAPE A + V+SD
Sbjct: 155 SNILLDRSGNIKLCDFGIS---GQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSD 211
Query: 210 VFSFGVLLLEIISGR 224
V+S G+ L E+ +GR
Sbjct: 212 VWSLGITLYELATGR 226
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 82/205 (40%), Gaps = 43/205 (20%)
Query: 52 NFSNENKLGEGGFGPV--YKGVLNDDKEIAVK-----RLSRSSGQGLQEFKNLIAKLQHK 104
N+ +G+G F V + +L KE+AVK +L+ SS Q L ++ L H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTG-KEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 105 NLVRXXXXXXXXXXXXXICEYMPN-KSLDFLLFDSTRSVQLDWNRRMCIINGIARDHK-- 161
N+V+ + EY + D+L+ + + I++ + H+
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 162 ----------------MNPKISDFGMARVFG-GNQSEANTNRVVGTYGYMAPEYALEGLF 204
MN KI+DFG + F GN+ +A AP YA LF
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCG---------APPYAAPELF 184
Query: 205 SVKS------DVFSFGVLLLEIISG 223
K DV+S GV+L ++SG
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 83/195 (42%), Gaps = 28/195 (14%)
Query: 53 FSNENKLGEGGFGPV-YKGVLNDDKEIAVKRLSRSSGQGLQEFKN---LIAKLQHKNLVR 108
N K+GEG G V V + K +AVK++ Q + N ++ QH+N+V
Sbjct: 26 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 85
Query: 109 XXXXXXXXXXXXXICEYMPNKSLDFLLF------DSTRSVQLDWNRRMCIING---IARD 159
+ E++ +L ++ + +V L + + +++ I RD
Sbjct: 86 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 145
Query: 160 ---------HKMNPKISDFGMARVFGGNQSEANTNR--VVGTYGYMAPEYALEGLFSVKS 208
H K+SDFG F S+ R +VGT +MAPE + +
Sbjct: 146 IKSDSILLTHDGRVKLSDFG----FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 201
Query: 209 DVFSFGVLLLEIISG 223
D++S G++++E++ G
Sbjct: 202 DIWSLGIMVIEMVDG 216
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 83/212 (39%), Gaps = 50/212 (23%)
Query: 56 ENKLGEGGFGPVYKGVLNDD---KEIAVKRLSR-SSGQGLQEFK---NLIAKL-QHKNLV 107
++ +GEG FG V K + D + A+KR+ +S ++F ++ KL H N++
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 108 RXXXXXXXXXXXXXICEYMPNKSL-DFL-------------LFDSTRSV----------- 142
EY P+ +L DFL + +ST S
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 143 ----------QLDWNRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVG--T 190
Q + R I KI+DFG++R E + +G
Sbjct: 147 DVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSR-----GQEVYVKKTMGRLP 201
Query: 191 YGYMAPEYALEGLFSVKSDVFSFGVLLLEIIS 222
+MA E +++ SDV+S+GVLL EI+S
Sbjct: 202 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEI 220
K++DFG+AR++ + A VV T Y APE L+ ++ D++S G + E+
Sbjct: 152 KLADFGLARIYSYQMALAP---VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEG--LFSVKS-DVFSFGVLLLEII 221
KI+DFG++ F G S+A + VGT +MAPE E +FS K+ DV++ GV L +
Sbjct: 177 KIADFGVSNEFKG--SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFV 234
Query: 222 SGR 224
G+
Sbjct: 235 FGQ 237
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 77/196 (39%), Gaps = 41/196 (20%)
Query: 58 KLGEGGFGPVYKGVLNDDK------EIAVKRLSRSSGQGLQEFKNLIAKLQHKNLVRXXX 111
++G G F VYKG+ + E+ ++L++S Q +E + LQH N+VR
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 112 XXXXXXXXXX----ICEYMPNKSLDFLL--FDSTR-SVQLDWNRRMCIINGIARDHKMNP 164
+ E + +L L F + V W R+ I+ G+ H P
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQ--ILKGLQFLHTRTP 150
Query: 165 ---------------------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGL 203
KI D G+A + + ++A V+GT + APE E
Sbjct: 151 PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA----VIGTPEFXAPE-XYEEK 205
Query: 204 FSVKSDVFSFGVLLLE 219
+ DV++FG LE
Sbjct: 206 YDESVDVYAFGXCXLE 221
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 153 INGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFS 212
++ + D + + KI+DFGM + T GT Y+APE + D ++
Sbjct: 148 LDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWA 205
Query: 213 FGVLLLEIISGR 224
+GVLL E+++G+
Sbjct: 206 YGVLLYEMLAGQ 217
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEI 220
K++DFG+AR++ + + VV T Y APE L+ ++ D++S G + E+
Sbjct: 152 KLADFGLARIYSYQMA---LDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 101/263 (38%), Gaps = 39/263 (14%)
Query: 42 PLDLIHEATRNFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEF 94
PL A +F LG+G FG VY K I A+K L ++ L+
Sbjct: 2 PLGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 95 KNLIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIIN 154
+ + L+H N++R I EY P L + + + + D R I
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYIT 118
Query: 155 GIA-------------RDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYG 192
+A RD K KI+DFG + + + + + GT
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLD 174
Query: 193 YMAPEYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQ---SLLTYTWKLWCEG 249
Y+ PE + K D++S GVL E + G+ Y++ S + +T+ +
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
Query: 250 NAQELMDPVLKESFILEELLKRI 272
A++L+ +LK + +L+ +
Sbjct: 235 GARDLISRLLKHNPSQRPMLREV 257
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 28/195 (14%)
Query: 53 FSNENKLGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKN---LIAKLQHKNLVR 108
+N K+GEG G V + K++AVK++ Q + N ++ H N+V
Sbjct: 47 LANFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVD 106
Query: 109 XXXXXXXXXXXXXICEYMPNKSLDFLLF------DSTRSVQLDWNRRMCIING---IARD 159
+ E++ +L ++ + +V L R + ++ I RD
Sbjct: 107 MYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRD 166
Query: 160 HKMNP---------KISDFGMARVFGGNQSEANTNR--VVGTYGYMAPEYALEGLFSVKS 208
K + K+SDFG F S+ R +VGT +MAPE + +
Sbjct: 167 IKSDSILLTSDGRIKLSDFG----FCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEV 222
Query: 209 DVFSFGVLLLEIISG 223
D++S G++++E+I G
Sbjct: 223 DIWSLGIMVIEMIDG 237
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
Query: 155 GIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFG 214
I D + KI+DFG A+ T + GT Y+APE ++ D +SFG
Sbjct: 136 NILLDKNGHIKITDFGFAKYVPDV-----TYXLCGTPDYIAPEVVSTKPYNKSIDWWSFG 190
Query: 215 VLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFILEELLKRI 272
+L+ E+++G T FY ++ TY L NA+ P E +++LL R+
Sbjct: 191 ILIYEMLAGY--TPFY---DSNTMKTYEKIL----NAELRFPPFFNED--VKDLLSRL 237
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 92/209 (44%), Gaps = 44/209 (21%)
Query: 50 TRNFSNEN---KLGE-GGFGPVYKGVLNDDKEIAV----KRLSRSSGQGLQEFK---NLI 98
TR+ + E+ +GE G FG VYK +KE +V K + S + L+++ +++
Sbjct: 5 TRDLNPEDFWEIIGELGDFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 61
Query: 99 AKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTR-----SVQLDWNRRMCII 153
A H N+V+ + E+ ++D ++ + R +Q+ + + +
Sbjct: 62 ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDAL 121
Query: 154 NG------IARDHKM---------NPKISDFGMARVFGGNQSEANTNR--VVGTYGYMAP 196
N I RD K + K++DFG++ N R +GT +MAP
Sbjct: 122 NYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRTXIQRRDSFIGTPYWMAP 178
Query: 197 EYAL-----EGLFSVKSDVFSFGVLLLEI 220
E + + + K+DV+S G+ L+E+
Sbjct: 179 EVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 79/197 (40%), Gaps = 30/197 (15%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDK-EIAVKRLSRSSGQGLQEFKN---LIAKLQHKNLVR 108
++ EN +G G +G V V + A K++ + + + FK ++ L H N++R
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 70
Query: 109 XXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC-IINGIARDHKMNP--- 164
+ E L + + D R M +++ +A HK+N
Sbjct: 71 LYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHR 130
Query: 165 ------------------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSV 206
K+ DFG+A F + VGT Y++P+ LEGL+
Sbjct: 131 DLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK---VGTPYYVSPQ-VLEGLYGP 186
Query: 207 KSDVFSFGVLLLEIISG 223
+ D +S GV++ ++ G
Sbjct: 187 ECDEWSAGVMMYVLLCG 203
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 83/195 (42%), Gaps = 28/195 (14%)
Query: 53 FSNENKLGEGGFGPV-YKGVLNDDKEIAVKRLSRSSGQGLQEFKN---LIAKLQHKNLVR 108
N K+GEG G V V + K +AVK++ Q + N ++ QH+N+V
Sbjct: 76 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 135
Query: 109 XXXXXXXXXXXXXICEYMPNKSLDFLLF------DSTRSVQLDWNRRMCIING---IARD 159
+ E++ +L ++ + +V L + + +++ I RD
Sbjct: 136 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 195
Query: 160 ---------HKMNPKISDFGMARVFGGNQSEANTNR--VVGTYGYMAPEYALEGLFSVKS 208
H K+SDFG F S+ R +VGT +MAPE + +
Sbjct: 196 IKSDSILLTHDGRVKLSDFG----FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 251
Query: 209 DVFSFGVLLLEIISG 223
D++S G++++E++ G
Sbjct: 252 DIWSLGIMVIEMVDG 266
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 77/195 (39%), Gaps = 32/195 (16%)
Query: 59 LGEGGFGPV----YKGVLNDDKE-IAVKRLSRSSG----QGLQEFKNLIAKLQHKNLVRX 109
LGEG FG V Y + E +AVK L G G ++ +++ L H+++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 110 X--XXXXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQL-----------------DWNRR 149
+ EY+P SL D+L S QL + R
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHR 141
Query: 150 MCIINGIARDHKMNPKISDFGMARVF--GGNQSEANTNRVVGTYGYMAPEYALEGLFSVK 207
+ D+ KI DFG+A+ G + + Y APE E F
Sbjct: 142 NLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEYKFYYA 200
Query: 208 SDVFSFGVLLLEIIS 222
SDV+SFGV L E+++
Sbjct: 201 SDVWSFGVTLYELLT 215
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 28/190 (14%)
Query: 58 KLGEGGFGPV-YKGVLNDDKEIAVKRLSRSSGQGLQEFKN---LIAKLQHKNLVRXXXXX 113
K+GEG G V V + K +AVK++ Q + N ++ QH+N+V
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 114 XXXXXXXXICEYMPNKSLDFLLF------DSTRSVQLDWNRRMCIING---IARD----- 159
+ E++ +L ++ + +V L + + +++ I RD
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 277
Query: 160 ----HKMNPKISDFGMARVFGGNQSEANTNR--VVGTYGYMAPEYALEGLFSVKSDVFSF 213
H K+SDFG F S+ R +VGT +MAPE + + D++S
Sbjct: 278 ILLTHDGRVKLSDFG----FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSL 333
Query: 214 GVLLLEIISG 223
G++++E++ G
Sbjct: 334 GIMVIEMVDG 343
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 78/194 (40%), Gaps = 30/194 (15%)
Query: 59 LGEGGFGPV----YKGVLNDDKE-IAVKRLSRSSG----QGLQEFKNLIAKLQHKNLVRX 109
LGEG FG V Y + E +AVK L G G ++ +++ L H+++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 110 X--XXXXXXXXXXXICEYMPNKSL-DFLLFDSTRSVQL-----------------DWNRR 149
+ EY+P SL D+L S QL + R
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHSQHYIHR 141
Query: 150 MCIINGIARDHKMNPKISDFGMAR-VFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKS 208
+ D+ KI DFG+A+ V G++ + APE E F S
Sbjct: 142 NLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYAS 201
Query: 209 DVFSFGVLLLEIIS 222
DV+SFGV L E+++
Sbjct: 202 DVWSFGVTLYELLT 215
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 153 INGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFS 212
++ + D + + K++D+GM + G + T+ GT Y+APE + D ++
Sbjct: 149 LDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWA 206
Query: 213 FGVLLLEIISGR 224
GVL+ E+++GR
Sbjct: 207 LGVLMFEMMAGR 218
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 153 INGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFS 212
++ + D + + K++D+GM + G + T+ GT Y+APE + D ++
Sbjct: 134 LDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWA 191
Query: 213 FGVLLLEIISGR 224
GVL+ E+++GR
Sbjct: 192 LGVLMFEMMAGR 203
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEI 220
K++DFG+AR++ + VV T Y APE L+ ++ D++S G + E+
Sbjct: 160 KLADFGLARIYSYQMA---LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 212
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 98/256 (38%), Gaps = 39/256 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKL 101
A +F LG+G FG VY K I A+K L ++ L+ + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIA---- 157
+H N++R I EY P L + + + + D R I +A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 158 ---------RDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYA 199
RD K KI+DFG + + + + GT Y+ PE
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTELCGTLDYLPPEMI 178
Query: 200 LEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQ---SLLTYTWKLWCEGNAQELMD 256
+ K D++S GVL E + G+ Y++ S + +T+ + A++L+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 238
Query: 257 PVLKESFILEELLKRI 272
+LK + +L+ +
Sbjct: 239 RLLKHNPSQRPMLREV 254
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 79/197 (40%), Gaps = 30/197 (15%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDK-EIAVKRLSRSSGQGLQEFKN---LIAKLQHKNLVR 108
++ EN +G G +G V V + A K++ + + + FK ++ L H N++R
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 87
Query: 109 XXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC-IINGIARDHKMNP--- 164
+ E L + + D R M +++ +A HK+N
Sbjct: 88 LYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHR 147
Query: 165 ------------------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSV 206
K+ DFG+A F + VGT Y++P+ LEGL+
Sbjct: 148 DLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK---VGTPYYVSPQ-VLEGLYGP 203
Query: 207 KSDVFSFGVLLLEIISG 223
+ D +S GV++ ++ G
Sbjct: 204 ECDEWSAGVMMYVLLCG 220
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 99/256 (38%), Gaps = 39/256 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKL 101
A +F LG+G FG VY K I A+K L ++ L+ + + L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIA---- 157
+H N++R I EY P L + + + + D R I +A
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 158 ---------RDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYA 199
RD K KI+DFG + + + + + GT Y+ PE
Sbjct: 149 YCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLPPEMI 204
Query: 200 LEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQ---SLLTYTWKLWCEGNAQELMD 256
+ K D++S GVL E + G+ Y++ S + +T+ + A++L+
Sbjct: 205 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 264
Query: 257 PVLKESFILEELLKRI 272
+LK + +L+ +
Sbjct: 265 RLLKHNPSQRPMLREV 280
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 153 INGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFS 212
++ + D + + K++D+GM + G + T+ GT Y+APE + D ++
Sbjct: 138 LDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWA 195
Query: 213 FGVLLLEIISGR 224
GVL+ E+++GR
Sbjct: 196 LGVLMFEMMAGR 207
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 99/256 (38%), Gaps = 39/256 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKL 101
A +F LG+G FG VY K I A+K L ++ L+ + + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIA---- 157
+H N++R I EY P L + + + + D R I +A
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 158 ---------RDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYA 199
RD K KI+DFG + + + + + GT Y+ PE
Sbjct: 124 YCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDTLCGTLDYLPPEMI 179
Query: 200 LEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQ---SLLTYTWKLWCEGNAQELMD 256
+ K D++S GVL E + G+ Y++ S + +T+ + A++L+
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 239
Query: 257 PVLKESFILEELLKRI 272
+LK + +L+ +
Sbjct: 240 RLLKHNPSQRPMLREV 255
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 84/196 (42%), Gaps = 34/196 (17%)
Query: 57 NKLGEGGFGPVYKGVLN-DDKEIAVKRLSRSS-------GQGLQEFKNLIAKLQHKNLVR 108
+ LG G FG V G ++AVK L+R G+ +E +NL +H ++++
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNL-KLFRHPHIIK 75
Query: 109 XXXXXXXXXXXXXICEYMPNKSL-DFL-------------LFDSTRSVQLDWNRRMCIIN 154
+ EY+ L D++ LF S +D+ R +++
Sbjct: 76 LYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSA-VDYCHRHMVVH 134
Query: 155 ------GIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFS-VK 207
+ D MN KI+DFG++ + + ++ G+ Y APE L++ +
Sbjct: 135 RDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS---CGSPNYAAPEVISGRLYAGPE 191
Query: 208 SDVFSFGVLLLEIISG 223
D++S GV+L ++ G
Sbjct: 192 VDIWSCGVILYALLCG 207
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 83/195 (42%), Gaps = 32/195 (16%)
Query: 57 NKLGEGGFGPVYKGVLN-DDKEIAVKRLSRSS-------GQGLQEFKNLIAKLQHKNLVR 108
+ LG G FG V G ++AVK L+R G+ +E +NL +H ++++
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNL-KLFRHPHIIK 80
Query: 109 XXXXXXXXXXXXXICEYMPNKSL-DFLL----FDSTRSVQL--------DWNRRMCIIN- 154
+ EY+ L D++ D S +L D+ R +++
Sbjct: 81 LYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHR 140
Query: 155 -----GIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFS-VKS 208
+ D MN KI+DFG++ + + + G+ Y APE L++ +
Sbjct: 141 DLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS---CGSPNYAAPEVISGRLYAGPEV 197
Query: 209 DVFSFGVLLLEIISG 223
D++S GV+L ++ G
Sbjct: 198 DIWSSGVILYALLCG 212
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 29/161 (18%)
Query: 142 VQLDWNRRMCIINGIARDHKMNPKISDFGMAR-VFGGNQSEANTNRVVGTYGYMAPEYAL 200
+ D R C++ A D M ++DFG++R ++ G+ + ++A E
Sbjct: 159 IHRDLAARNCML---AED--MTVCVADFGLSRKIYSGDYYRQGCASKLPV-KWLALESLA 212
Query: 201 EGLFSVKSDVFSFGVLLLEII-------SGRKDTRFYLYEQGQSLLTYTWKLWCEGNAQE 253
+ L++V SDV++FGV + EI+ +G ++ Y Y G + L + C +
Sbjct: 213 DNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPE--CMEEVYD 270
Query: 254 LM------DPVLKESFI-----LEELLKRIHIGLLCVQEDP 283
LM DP + SF LE +L H+ +L +DP
Sbjct: 271 LMYQCWSADPKQRPSFTCLRMELENILG--HLSVLSTSQDP 309
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 153 INGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFS 212
++ + D + + K++D+GM + G + T+ GT Y+APE + D ++
Sbjct: 181 LDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWA 238
Query: 213 FGVLLLEIISGR 224
GVL+ E+++GR
Sbjct: 239 LGVLMFEMMAGR 250
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 94/246 (38%), Gaps = 39/246 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKL 101
A +F LG+G FG VY K I A+K L ++ L+ + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIA---- 157
+H N++R I EY P L + + + + D R I +A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 158 ---------RDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYA 199
RD K KI+DFG + + + + GT Y+ PE
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTXLCGTLDYLPPEMI 178
Query: 200 LEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQ---SLLTYTWKLWCEGNAQELMD 256
+ K D++S GVL E + G+ Y++ S + +T+ + A++L+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 238
Query: 257 PVLKES 262
+LK +
Sbjct: 239 RLLKHN 244
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Query: 165 KISDFGMARVFGGNQSE----------ANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFG 214
K+ DFG+ ++ E A VGT YM+PE +S K D+FS G
Sbjct: 204 KVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLG 263
Query: 215 VLLLEII 221
++L E++
Sbjct: 264 LILFELL 270
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 98/256 (38%), Gaps = 39/256 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKL 101
A +F LG+G FG VY K I A+K L ++ L+ + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIA---- 157
+H N++R I EY P L + + + + D R I +A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 158 ---------RDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYA 199
RD K KI+DFG + + + + GT Y+ PE
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMI 178
Query: 200 LEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQ---SLLTYTWKLWCEGNAQELMD 256
+ K D++S GVL E + G+ Y++ S + +T+ + A++L+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 238
Query: 257 PVLKESFILEELLKRI 272
+LK + +L+ +
Sbjct: 239 RLLKHNPSQRPMLREV 254
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 99/253 (39%), Gaps = 33/253 (13%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKL 101
A +F LG+G FG VY K I A+K L ++ L+ + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPN----KSLDFL-LFDSTRSV--------QLDWNR 148
+H N++R I EY P K L L FD R+ L +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 149 RMCIINGIARDHKM------NPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEG 202
+I+ + + KI+DFG + + + + GT Y+ PE
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGR 186
Query: 203 LFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQ---SLLTYTWKLWCEGNAQELMDPVL 259
+ K D++S GVL E + G+ Y++ S + +T+ + A++L+ +L
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 246
Query: 260 KESFILEELLKRI 272
K + +L+ +
Sbjct: 247 KHNPSQRPMLREV 259
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 94/246 (38%), Gaps = 39/246 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKL 101
A +F LG+G FG VY K I A+K L ++ L+ + + L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIA---- 157
+H N++R I EY P L + + + + D R I +A
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 121
Query: 158 ---------RDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYA 199
RD K KI+DFG + + + + GT Y+ PE
Sbjct: 122 YCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMI 177
Query: 200 LEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQ---SLLTYTWKLWCEGNAQELMD 256
+ K D++S GVL E + G+ Y++ S + +T+ + A++L+
Sbjct: 178 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 237
Query: 257 PVLKES 262
+LK +
Sbjct: 238 RLLKHN 243
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 85/216 (39%), Gaps = 50/216 (23%)
Query: 47 HEATRNFSNENKLGEGGFGPVYKGVLNDDKE----IAVKRLSR-SSGQGLQEFKN---LI 98
HE S+ +G+G FG VY G D + A+K LSR + Q ++ F L+
Sbjct: 18 HERVVTHSD-RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLM 76
Query: 99 AKLQHKN-LVRXXXXXXXXXXXXXICEYMPNKSL--------------DFLLFD------ 137
L H N L + YM + L D + F
Sbjct: 77 RGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARG 136
Query: 138 -----STRSVQLDWNRRMCIINGIARDHKMNPKISDFGMAR-VFGGNQSEANTNRVVGTY 191
+ V D R C++ D K++DFG+AR + +R +
Sbjct: 137 MEYLAEQKFVHRDLAARNCML-----DESFTVKVADFGLARDILDREYYSVQQHR----H 187
Query: 192 GYMAPEY-ALEGL----FSVKSDVFSFGVLLLEIIS 222
+ ++ ALE L F+ KSDV+SFGVLL E+++
Sbjct: 188 ARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 98/256 (38%), Gaps = 39/256 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKL 101
A +F LG+G FG VY K I A+K L ++ L+ + + L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIA---- 157
+H N++R I EY P L + + + + D R I +A
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 126
Query: 158 ---------RDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYA 199
RD K KI+DFG + + + + GT Y+ PE
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMI 182
Query: 200 LEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQ---SLLTYTWKLWCEGNAQELMD 256
+ K D++S GVL E + G+ Y++ S + +T+ + A++L+
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 242
Query: 257 PVLKESFILEELLKRI 272
+LK + +L+ +
Sbjct: 243 RLLKHNPSQRPMLREV 258
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 88/215 (40%), Gaps = 59/215 (27%)
Query: 51 RNFSNENKLGEGGFGPV---YKGVLNDDKEIAVKRLSR---SSGQGLQEFKNLI--AKLQ 102
+ + N +G G G V Y +L ++ +A+K+LSR + + ++ L+ +
Sbjct: 24 KRYQNLKPIGSGAQGIVVAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 103 HKNLVRXXXXXXXXXXXXXICEYMPNKSLD--------FLLFDSTRS----VQLDWNRRM 150
HKN++ + + P KSL+ L D+ S ++LD R
Sbjct: 82 HKNII------------GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 151 CIIN----GIARDHK-------MNP-----------KISDFGMARVFGGNQSEANTNRVV 188
++ GI H + P KI DFG+AR G S T VV
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG--TSFMMTPYVV 187
Query: 189 GTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
Y Y APE L + D++S GV++ E+I G
Sbjct: 188 TRY-YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 94/246 (38%), Gaps = 39/246 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKL 101
A +F LG+G FG VY K I A+K L ++ L+ + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIA---- 157
+H N++R I EY P L + + + + D R I +A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 158 ---------RDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYA 199
RD K KI+DFG + + + + GT Y+ PE
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMI 181
Query: 200 LEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQ---SLLTYTWKLWCEGNAQELMD 256
+ K D++S GVL E + G+ Y++ S + +T+ + A++L+
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 241
Query: 257 PVLKES 262
+LK +
Sbjct: 242 RLLKHN 247
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 98/256 (38%), Gaps = 39/256 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKL 101
A +F LG+G FG VY K I A+K L ++ L+ + + L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIA---- 157
+H N++R I EY P L + + + + D R I +A
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 158 ---------RDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYA 199
RD K KI+DFG + + + + GT Y+ PE
Sbjct: 149 YCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMI 204
Query: 200 LEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQ---SLLTYTWKLWCEGNAQELMD 256
+ K D++S GVL E + G+ Y++ S + +T+ + A++L+
Sbjct: 205 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 264
Query: 257 PVLKESFILEELLKRI 272
+LK + +L+ +
Sbjct: 265 RLLKHNPSQRPMLREV 280
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 35/195 (17%)
Query: 59 LGEGGFGPVYKGV-LNDDKEIAVKRLSRS----SGQGLQEFKNL--IAKLQHKNLVRXXX 111
LGEG FG V +++A+K +SR S ++ + + + L+H ++++
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 112 XXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRR-----MCIINGIAR-------- 158
+ EY + D+++ + + D RR +C I R
Sbjct: 77 VITTPTDIVMVIEYAGGELFDYIV--EKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDL 134
Query: 159 -------DHKMNPKISDFGMARVF-GGNQSEANTNRVVGTYGYMAPEYALEGLFS-VKSD 209
D +N KI+DFG++ + GN + + G+ Y APE L++ + D
Sbjct: 135 KPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC----GSPNYAAPEVINGKLYAGPEVD 190
Query: 210 VFSFGVLLLEIISGR 224
V+S G++L ++ GR
Sbjct: 191 VWSCGIVLYVMLVGR 205
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 88/215 (40%), Gaps = 59/215 (27%)
Query: 51 RNFSNENKLGEGGFGPV---YKGVLNDDKEIAVKRLSR---SSGQGLQEFKNLI--AKLQ 102
+ + N +G G G V Y +L ++ +A+K+LSR + + ++ L+ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 103 HKNLVRXXXXXXXXXXXXXICEYMPNKSLDFL--------LFDSTRS----VQLDWNRRM 150
HKN++ + + P KSL+ L D+ S ++LD R
Sbjct: 82 HKNII------------GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 151 CIIN----GIARDHK-------MNP-----------KISDFGMARVFGGNQSEANTNRVV 188
++ GI H + P KI DFG+AR G S T VV
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG--TSFMMTPYVV 187
Query: 189 GTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
Y Y APE L + D++S GV++ E+I G
Sbjct: 188 TRY-YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
K++DFG+A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 181 KVTDFGLAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 94/243 (38%), Gaps = 39/243 (16%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKLQHK 104
+F LG+G FG VY K I A+K L ++ L+ + + L+H
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 105 NLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIA------- 157
N++R I EY P L + + + + D R I +A
Sbjct: 73 NILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSRFDEQRTATYITELANALSYCH 129
Query: 158 ------RDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEG 202
RD K KI+DFG + + + + + GT Y+ PE
Sbjct: 130 SKRVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRDTLCGTLDYLPPEMIEGR 185
Query: 203 LFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQ---SLLTYTWKLWCEGNAQELMDPVL 259
+ K D++S GVL E + G + Y++ S + +T+ + A++L+ +L
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLL 245
Query: 260 KES 262
K +
Sbjct: 246 KHN 248
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 83/196 (42%), Gaps = 34/196 (17%)
Query: 57 NKLGEGGFGPVYKGVLN-DDKEIAVKRLSRSS-------GQGLQEFKNLIAKLQHKNLVR 108
+ LG G FG V G ++AVK L+R G+ +E +NL +H ++++
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNL-KLFRHPHIIK 75
Query: 109 XXXXXXXXXXXXXICEYMPNKSL-DFL-------------LFDSTRSVQLDWNRRMCIIN 154
+ EY+ L D++ LF S +D+ R +++
Sbjct: 76 LYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSA-VDYCHRHMVVH 134
Query: 155 ------GIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFS-VK 207
+ D MN KI+DFG++ + + + G+ Y APE L++ +
Sbjct: 135 RDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS---CGSPNYAAPEVISGRLYAGPE 191
Query: 208 SDVFSFGVLLLEIISG 223
D++S GV+L ++ G
Sbjct: 192 VDIWSCGVILYALLCG 207
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 98/256 (38%), Gaps = 39/256 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKL 101
A +F LG+G FG VY K I A+K L ++ L+ + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIA---- 157
+H N++R I EY P L + + + + D R I +A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 158 ---------RDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYA 199
RD K KI+DFG + + + + GT Y+ PE
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMI 181
Query: 200 LEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQ---SLLTYTWKLWCEGNAQELMD 256
+ K D++S GVL E + G+ Y++ S + +T+ + A++L+
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 241
Query: 257 PVLKESFILEELLKRI 272
+LK + +L+ +
Sbjct: 242 RLLKHNPSQRPMLREV 257
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 94/246 (38%), Gaps = 39/246 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKL 101
A +F LG+G FG VY K I A+K L ++ L+ + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIA---- 157
+H N++R I EY P L + + + + D R I +A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 158 ---------RDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYA 199
RD K KI+DFG + + + + GT Y+ PE
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEMI 178
Query: 200 LEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQ---SLLTYTWKLWCEGNAQELMD 256
+ K D++S GVL E + G+ Y++ S + +T+ + A++L+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 238
Query: 257 PVLKES 262
+LK +
Sbjct: 239 RLLKHN 244
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 81/198 (40%), Gaps = 43/198 (21%)
Query: 59 LGEGGFGPV--YKGVLNDDKEIAVK-----RLSRSSGQGLQEFKNLIAKLQHKNLVRXXX 111
+G+G F V + +L KE+AVK +L+ SS Q L ++ L H N+V+
Sbjct: 22 IGKGNFAKVKLARHILTG-KEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 112 XXXXXXXXXXICEYMPN-KSLDFLLFDSTRSVQLDWNRRMCIINGIARDHK--------- 161
+ EY + D+L+ + + I++ + H+
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 162 ---------MNPKISDFGMARVFG-GNQSEANTNRVVGTYGYMAPEYALEGLFSVKS--- 208
MN KI+DFG + F GN+ + G+ Y APE LF K
Sbjct: 141 AENLLLDADMNIKIADFGFSNEFTFGNKLDT----FCGSPPYAAPE-----LFQGKKYDG 191
Query: 209 ---DVFSFGVLLLEIISG 223
DV+S GV+L ++SG
Sbjct: 192 PEVDVWSLGVILYTLVSG 209
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 40/200 (20%)
Query: 58 KLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKLQHKNLVRXX 110
K+GEG +G V+K + EI A+KR+ L+E L+ +L+HKN+VR
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREI-CLLKELKHKNIVRLH 67
Query: 111 XXXXXXXXXXXICEYMP----------NKSLD------FLL-------FDSTRSV-QLDW 146
+ E+ N LD FL F +R+V D
Sbjct: 68 DVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDL 127
Query: 147 NRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEG-LFS 205
+ +IN R+ ++ K++DFG+AR FG + VV T Y P+ L+S
Sbjct: 128 KPQNLLIN---RNGEL--KLADFGLARAFGI-PVRCYSAEVV-TLWYRPPDVLFGAKLYS 180
Query: 206 VKSDVFSFGVLLLEIISGRK 225
D++S G + E+ + +
Sbjct: 181 TSIDMWSAGCIFAELANAAR 200
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 98/256 (38%), Gaps = 39/256 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKL 101
A +F LG+G FG VY K I A+K L ++ L+ + + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIA---- 157
+H N++R I EY P L + + + + D R I +A
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 158 ---------RDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYA 199
RD K KI+DFG + + + + GT Y+ PE
Sbjct: 125 YCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEMI 180
Query: 200 LEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQ---SLLTYTWKLWCEGNAQELMD 256
+ K D++S GVL E + G+ Y++ S + +T+ + A++L+
Sbjct: 181 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 240
Query: 257 PVLKESFILEELLKRI 272
+LK + +L+ +
Sbjct: 241 RLLKHNPSQRPMLREV 256
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 98/256 (38%), Gaps = 39/256 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKL 101
A +F LG+G FG VY K I A+K L ++ L+ + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIA---- 157
+H N++R I EY P L + + + + D R I +A
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 158 ---------RDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYA 199
RD K KI+DFG + + + + GT Y+ PE
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMI 183
Query: 200 LEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQ---SLLTYTWKLWCEGNAQELMD 256
+ K D++S GVL E + G+ Y++ S + +T+ + A++L+
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 243
Query: 257 PVLKESFILEELLKRI 272
+LK + +L+ +
Sbjct: 244 RLLKHNPSQRPMLREV 259
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 81/198 (40%), Gaps = 43/198 (21%)
Query: 59 LGEGGFGPV--YKGVLNDDKEIAVK-----RLSRSSGQGLQEFKNLIAKLQHKNLVRXXX 111
+G+G F V + +L KE+AVK +L+ SS Q L ++ L H N+V+
Sbjct: 22 IGKGNFAKVKLARHILTG-KEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 112 XXXXXXXXXXICEYMPN-KSLDFLLFDSTRSVQLDWNRRMCIINGIARDHK--------- 161
+ EY + D+L+ + + I++ + H+
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 162 ---------MNPKISDFGMARVFG-GNQSEANTNRVVGTYGYMAPEYALEGLFSVKS--- 208
MN KI+DFG + F GN+ + G+ Y APE LF K
Sbjct: 141 AENLLLDADMNIKIADFGFSNEFTFGNKLDT----FCGSPPYAAPE-----LFQGKKYDG 191
Query: 209 ---DVFSFGVLLLEIISG 223
DV+S GV+L ++SG
Sbjct: 192 PEVDVWSLGVILYTLVSG 209
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 98/256 (38%), Gaps = 39/256 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKL 101
A +F LG+G FG VY K I A+K L ++ L+ + + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIA---- 157
+H N++R I EY P L + + + + D R I +A
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 158 ---------RDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYA 199
RD K KI+DFG + + + + GT Y+ PE
Sbjct: 124 YCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEMI 179
Query: 200 LEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQ---SLLTYTWKLWCEGNAQELMD 256
+ K D++S GVL E + G+ Y++ S + +T+ + A++L+
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 239
Query: 257 PVLKESFILEELLKRI 272
+LK + +L+ +
Sbjct: 240 RLLKHNPSQRPMLREV 255
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 98/256 (38%), Gaps = 39/256 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKL 101
A +F LG+G FG VY K I A+K L ++ L+ + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIA---- 157
+H N++R I EY P L + + + + D R I +A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 158 ---------RDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYA 199
RD K KI+DFG + + + + GT Y+ PE
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEMI 178
Query: 200 LEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQ---SLLTYTWKLWCEGNAQELMD 256
+ K D++S GVL E + G+ Y++ S + +T+ + A++L+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 238
Query: 257 PVLKESFILEELLKRI 272
+LK + +L+ +
Sbjct: 239 RLLKHNPSQRPMLREV 254
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 98/256 (38%), Gaps = 39/256 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKL 101
A +F LG+G FG VY K I A+K L ++ L+ + + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIA---- 157
+H N++R I EY P L + + + + D R I +A
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 158 ---------RDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYA 199
RD K KI+DFG + + + + GT Y+ PE
Sbjct: 124 YCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSCHAPSSRRTTLSGTLDYLPPEMI 179
Query: 200 LEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQ---SLLTYTWKLWCEGNAQELMD 256
+ K D++S GVL E + G+ Y++ S + +T+ + A++L+
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 239
Query: 257 PVLKESFILEELLKRI 272
+LK + +L+ +
Sbjct: 240 RLLKHNPSQRPMLREV 255
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 98/256 (38%), Gaps = 39/256 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKL 101
A +F LG+G FG VY K I A+K L ++ L+ + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIA---- 157
+H N++R I EY P L + + + + D R I +A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 158 ---------RDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYA 199
RD K KI+DFG + + + + GT Y+ PE
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEMI 178
Query: 200 LEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQ---SLLTYTWKLWCEGNAQELMD 256
+ K D++S GVL E + G+ Y++ S + +T+ + A++L+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 238
Query: 257 PVLKESFILEELLKRI 272
+LK + +L+ +
Sbjct: 239 RLLKHNPSQRPMLREV 254
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 94/246 (38%), Gaps = 39/246 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKL 101
A +F LG+G FG VY K I A+K L ++ L+ + + L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIA---- 157
+H N++R I EY P L + + + + D R I +A
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 119
Query: 158 ---------RDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYA 199
RD K KI+DFG + + + + GT Y+ PE
Sbjct: 120 YCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMI 175
Query: 200 LEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQ---SLLTYTWKLWCEGNAQELMD 256
+ K D++S GVL E + G+ Y++ S + +T+ + A++L+
Sbjct: 176 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 235
Query: 257 PVLKES 262
+LK +
Sbjct: 236 RLLKHN 241
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 94/246 (38%), Gaps = 39/246 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKL 101
A +F LG+G FG VY K I A+K L ++ L+ + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIA---- 157
+H N++R I EY P L + + + + D R I +A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 158 ---------RDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYA 199
RD K KI+DFG + + + + GT Y+ PE
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEMI 181
Query: 200 LEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQ---SLLTYTWKLWCEGNAQELMD 256
+ K D++S GVL E + G+ Y++ S + +T+ + A++L+
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 241
Query: 257 PVLKES 262
+LK +
Sbjct: 242 RLLKHN 247
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 98/256 (38%), Gaps = 39/256 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKL 101
A +F LG+G FG VY K I A+K L ++ L+ + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIA---- 157
+H N++R I EY P L + + + + D R I +A
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 158 ---------RDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYA 199
RD K KI+DFG + + + + GT Y+ PE
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEMI 183
Query: 200 LEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQ---SLLTYTWKLWCEGNAQELMD 256
+ K D++S GVL E + G+ Y++ S + +T+ + A++L+
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 243
Query: 257 PVLKESFILEELLKRI 272
+LK + +L+ +
Sbjct: 244 RLLKHNPSQRPMLREV 259
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 99/253 (39%), Gaps = 33/253 (13%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKL 101
A +F LG+G FG VY K I A+K L ++ L+ + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPN----KSLDFL-LFDSTRSV--------QLDWNR 148
+H N++R I EY P K L L FD R+ L +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 149 RMCIINGIARDHKM------NPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEG 202
+I+ + + KI+DFG + + + + GT Y+ PE
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLXGTLDYLPPEMIEGR 186
Query: 203 LFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQ---SLLTYTWKLWCEGNAQELMDPVL 259
+ K D++S GVL E + G+ Y++ S + +T+ + A++L+ +L
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 246
Query: 260 KESFILEELLKRI 272
K + +L+ +
Sbjct: 247 KHNPSQRPMLREV 259
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 98/256 (38%), Gaps = 39/256 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKL 101
A +F LG+G FG VY K I A+K L ++ L+ + + L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIA---- 157
+H N++R I EY P L + + + + D R I +A
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 139
Query: 158 ---------RDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYA 199
RD K KI+DFG + + + + GT Y+ PE
Sbjct: 140 YCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMI 195
Query: 200 LEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQ---SLLTYTWKLWCEGNAQELMD 256
+ K D++S GVL E + G+ Y++ S + +T+ + A++L+
Sbjct: 196 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 255
Query: 257 PVLKESFILEELLKRI 272
+LK + +L+ +
Sbjct: 256 RLLKHNPSQRPMLREV 271
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 95/246 (38%), Gaps = 39/246 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKL 101
A +F LG+G FG VY K I A+K L ++ L+ + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIA---- 157
+H N++R I EY P L + + + + D R I +A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 158 ---------RDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYA 199
RD K KI+DFG + ++ A + GT Y+ PE
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA----LCGTLDYLPPEMI 178
Query: 200 LEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQ---SLLTYTWKLWCEGNAQELMD 256
+ K D++S GVL E + G+ Y++ S + +T+ + A++L+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 238
Query: 257 PVLKES 262
+LK +
Sbjct: 239 RLLKHN 244
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 83/205 (40%), Gaps = 43/205 (20%)
Query: 52 NFSNENKLGEGGFGPV--YKGVLNDDKEIAVK-----RLSRSSGQGLQEFKNLIAKLQHK 104
N+ +G+G F V + +L KE+AVK +L+ SS Q L ++ L H
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTG-KEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 66
Query: 105 NLVRXXXXXXXXXXXXXICEYMPN-KSLDFLLFDSTRSVQLDWNRRMCIINGIARDHK-- 161
N+V+ + EY + D+L+ + + I++ + H+
Sbjct: 67 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKF 126
Query: 162 ----------------MNPKISDFGMARVFG-GNQSEANTNRVVGTYGYMAPEYALEGLF 204
MN KI+DFG + F GN+ + G+ Y APE LF
Sbjct: 127 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT----FCGSPPYAAPE-----LF 177
Query: 205 SVKS------DVFSFGVLLLEIISG 223
K DV+S GV+L ++SG
Sbjct: 178 QGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
K++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 182 KVADFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
K++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 182 KVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 93/243 (38%), Gaps = 39/243 (16%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKLQHK 104
+F LG+G FG VY K I A+K L ++ L+ + + L+H
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 105 NLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIA------- 157
N++R I EY P L + + + + D R I +A
Sbjct: 73 NILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSRFDEQRTATYITELANALSYCH 129
Query: 158 ------RDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEG 202
RD K KI+DFG + + + + GT Y+ PE
Sbjct: 130 SKRVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGR 185
Query: 203 LFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQ---SLLTYTWKLWCEGNAQELMDPVL 259
+ K D++S GVL E + G + Y++ S + +T+ + A++L+ +L
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLL 245
Query: 260 KES 262
K +
Sbjct: 246 KHN 248
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 99/256 (38%), Gaps = 39/256 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKL 101
A +F LG+G FG VY + K I A+K L ++ L+ + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIA---- 157
+H N++R I EY P L + + + + D R I +A
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 158 ---------RDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYA 199
RD K KI+DFG + ++ A + GT Y+ PE
Sbjct: 123 YCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA----LCGTLDYLPPEMI 178
Query: 200 LEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQ---SLLTYTWKLWCEGNAQELMD 256
+ K D++S GVL E + G+ Y+ S + +T+ + A++L+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGARDLIS 238
Query: 257 PVLKESFILEELLKRI 272
+LK + +L+ +
Sbjct: 239 RLLKHNPSQRPMLREV 254
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
K++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 182 KVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
K++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 182 KVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 43/205 (20%)
Query: 52 NFSNENKLGEGGFGPV--YKGVLNDDKEIAVK-----RLSRSSGQGLQEFKNLIAKLQHK 104
N+ + +G+G F V + VL +E+AVK +L+ +S Q L ++ L H
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTG-REVAVKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 105 NLVRXXXXXXXXXXXXXICEYMPN-KSLDFLLFDSTRSVQLDWNRRMCIINGIARDHK-- 161
N+V+ + EY + D+L+ + + I++ + H+
Sbjct: 75 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKY 134
Query: 162 ----------------MNPKISDFGMARVFG-GNQSEANTNRVVGTYGYMAPEYALEGLF 204
MN KI+DFG + F GN+ + G+ Y APE LF
Sbjct: 135 IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT----FCGSPPYAAPE-----LF 185
Query: 205 SVKS------DVFSFGVLLLEIISG 223
K DV+S GV+L ++SG
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEI 220
K++DFG+AR++ + VV T Y APE L+ ++ D++S G + E+
Sbjct: 152 KLADFGLARIYSYQMA---LFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
K++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 181 KVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 162 MNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEII 221
M+ KI DFG+A + T + GT Y+APE + S + D++S G +L ++
Sbjct: 179 MDVKIGDFGLATKIEFDGERKKT--LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLL 236
Query: 222 SGR 224
G+
Sbjct: 237 VGK 239
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
K++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 182 KVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
K++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 181 KVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 8/63 (12%)
Query: 166 ISDFGMARVFGGNQSEANT--NRVVGTYGYMAPEYALEGL------FSVKSDVFSFGVLL 217
I+D G+A F + +E + N VGT YM PE E L + +D++SFG++L
Sbjct: 183 IADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLIL 242
Query: 218 LEI 220
E+
Sbjct: 243 WEV 245
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 99/256 (38%), Gaps = 39/256 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKL 101
A +F LG+G FG VY K I A+K L ++ L+ + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIA---- 157
+H N++R I EY P L + + + + D R I +A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 158 ---------RDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYA 199
RD K KI+DFG + ++ A + GT Y+ PE
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA----LCGTLDYLPPEMI 181
Query: 200 LEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQ---SLLTYTWKLWCEGNAQELMD 256
+ K D++S GVL E + G+ Y++ S + +T+ + A++L+
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 241
Query: 257 PVLKESFILEELLKRI 272
+LK + +L+ +
Sbjct: 242 RLLKHNPSQRPMLREV 257
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
K++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 181 KVADFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
K++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 181 KVADFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
K++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 181 KVADFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 43/198 (21%)
Query: 59 LGEGGFGPV--YKGVLNDDKEIAVK-----RLSRSSGQGLQEFKNLIAKLQHKNLVRXXX 111
+G+G F V + +L KE+AV+ +L+ SS Q L ++ L H N+V+
Sbjct: 22 IGKGNFAKVKLARHILTG-KEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 112 XXXXXXXXXXICEYMPN-KSLDFLLFDSTRSVQLDWNRRMCIINGIARDHK--------- 161
+ EY + D+L+ + + I++ + H+
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 162 ---------MNPKISDFGMARVFG-GNQSEANTNRVVGTYGYMAPEYALEGLFSVKS--- 208
MN KI+DFG + F GN+ + G+ Y APE LF K
Sbjct: 141 AENLLLDADMNIKIADFGFSNEFTFGNK----LDEFCGSPPYAAPE-----LFQGKKYDG 191
Query: 209 ---DVFSFGVLLLEIISG 223
DV+S GV+L ++SG
Sbjct: 192 PEVDVWSLGVILYTLVSG 209
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 111/275 (40%), Gaps = 62/275 (22%)
Query: 59 LGEGGFGPVYKGVLNDDK----EIAVK--RLSRSSGQGLQEFKNLIAKLQ---HKNLVRX 109
LGEG FG V +G L + ++AVK +L SS + ++EF + A ++ H N++R
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 110 XXXXXXXXXX-----XXICEYM---------------------PNKSLDFLLFDSTRSVQ 143
I +M P ++L + D ++
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 144 LDWNRR-----MCIINGIARDHKMNPKISDFGMAR-VFGGNQSEANTNRVVGT-YGYMAP 196
NR + N + RD M ++DFG+++ ++ G+ R+ ++A
Sbjct: 162 YLSNRNFLHRDLAARNCMLRD-DMTVCVADFGLSKKIYSGDY--YRQGRIAKMPVKWIAI 218
Query: 197 EYALEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCEGNAQELMD 256
E + +++ KSDV++FGV + EI + + Y Q + Y + L
Sbjct: 219 ESLADRVYTSKSDVWAFGVTMWEIAT--RGMTPYPGVQNHEMYDYLL------HGHRLKQ 270
Query: 257 PVLKESFILEELLKRIH-IGLLCVQEDPADRPTMS 290
P E+ L ++ I C + DP DRPT S
Sbjct: 271 P--------EDCLDELYEIMYSCWRTDPLDRPTFS 297
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 77/176 (43%), Gaps = 32/176 (18%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGR 224
KI DFG+A + T + GT Y+APE + S + DV+S G ++ ++ G+
Sbjct: 157 KIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
Query: 225 KDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFILEELLKRIHIGLLCVQEDPA 284
+E TY E + + ++PV + +++++L Q DP
Sbjct: 215 PP-----FETSCLKETYLRIKKNEYSIPKHINPV--AASLIQKML----------QTDPT 257
Query: 285 DRPTMSSVV--------FMLATDTITLLQPTQPAFSVGRVKSPSDLKVCSANEVTL 332
RPT++ ++ ++ A IT L P FS+ +PS L + +T+
Sbjct: 258 ARPTINELLNDEFFTSGYIPARLPITCLT-IPPXFSI----APSSLDPSNRKPLTV 308
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 162 MNPKISDFGMARV--FGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLE 219
M+ KI DFG+A F G + + + GT Y+APE + S + D++S G +L
Sbjct: 179 MDVKIGDFGLATKIEFDGERKKX----LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYT 234
Query: 220 IISGR 224
++ G+
Sbjct: 235 LLVGK 239
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 157 ARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVL 216
++D + ISDFG++++ G + GT GY+APE + +S D +S GV+
Sbjct: 155 SQDEESKIMISDFGLSKMEGKGDV---MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 211
Query: 217 LLEIISG 223
++ G
Sbjct: 212 AYILLCG 218
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGR 224
KI+DFG+ + G + A GT Y+APE + + D + GV++ E++ GR
Sbjct: 292 KITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGR 224
KI+DFG+ + G + A GT Y+APE + + D + GV++ E++ GR
Sbjct: 289 KITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 77/176 (43%), Gaps = 32/176 (18%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGR 224
KI DFG+A + T + GT Y+APE + S + DV+S G ++ ++ G+
Sbjct: 157 KIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
Query: 225 KDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFILEELLKRIHIGLLCVQEDPA 284
+E TY E + + ++PV + +++++L Q DP
Sbjct: 215 PP-----FETSCLKETYLRIKKNEYSIPKHINPV--AASLIQKML----------QTDPT 257
Query: 285 DRPTMSSVV--------FMLATDTITLLQPTQPAFSVGRVKSPSDLKVCSANEVTL 332
RPT++ ++ ++ A IT L P FS+ +PS L + +T+
Sbjct: 258 ARPTINELLNDEFFTSGYIPARLPITCLT-IPPRFSI----APSSLDPSNRKPLTV 308
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 83/205 (40%), Gaps = 43/205 (20%)
Query: 52 NFSNENKLGEGGFGPV--YKGVLNDDKEIAVK-----RLSRSSGQGLQEFKNLIAKLQHK 104
N+ +G+G F V + +L KE+AV+ +L+ SS Q L ++ L H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTG-KEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 105 NLVRXXXXXXXXXXXXXICEYMPN-KSLDFLLFDSTRSVQLDWNRRMCIINGIARDHK-- 161
N+V+ + EY + D+L+ + + I++ + H+
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 162 ----------------MNPKISDFGMARVFG-GNQSEANTNRVVGTYGYMAPEYALEGLF 204
MN KI+DFG + F GN+ + G+ Y APE LF
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT----FCGSPPYAAPE-----LF 184
Query: 205 SVKS------DVFSFGVLLLEIISG 223
K DV+S GV+L ++SG
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 77/176 (43%), Gaps = 32/176 (18%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGR 224
KI DFG+A + T + GT Y+APE + S + DV+S G ++ ++ G+
Sbjct: 161 KIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 218
Query: 225 KDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFILEELLKRIHIGLLCVQEDPA 284
+E TY E + + ++PV + +++++L Q DP
Sbjct: 219 PP-----FETSCLKETYLRIKKNEYSIPKHINPV--AASLIQKML----------QTDPT 261
Query: 285 DRPTMSSVV--------FMLATDTITLLQPTQPAFSVGRVKSPSDLKVCSANEVTL 332
RPT++ ++ ++ A IT L P FS+ +PS L + +T+
Sbjct: 262 ARPTINELLNDEFFTSGYIPARLPITCLT-IPPRFSI----APSSLDPSNRKPLTV 312
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 86/208 (41%), Gaps = 43/208 (20%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSSGQGLQEFKN----LIAKLQHKNL 106
++++ +G G FG VY+ L D E +A+K++ + + FKN ++ KL H N+
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 79
Query: 107 VR------XXXXXXXXXXXXXICEYMPNKS------------------LDFLLFDSTRSV 142
VR + +Y+P + ++ RS+
Sbjct: 80 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 139
Query: 143 QLDWNRRMCIINGIARDHKMNP-----KISDFGMARVFGGNQSEANTNRVVGTYGYMAPE 197
+ +C + ++ ++P K+ DFG A+ + E N + + Y Y APE
Sbjct: 140 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRY-YRAPE 196
Query: 198 YALEGL-FSVKSDVFSFGVLLLEIISGR 224
++ DV+S G +L E++ G+
Sbjct: 197 LIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 162 MNPKISDFGMARV--FGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLE 219
M+ KI DFG+A F G + + + GT Y+APE + S + D++S G +L
Sbjct: 163 MDVKIGDFGLATKIEFDGERKKD----LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYT 218
Query: 220 IISGR 224
++ G+
Sbjct: 219 LLVGK 223
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 86/208 (41%), Gaps = 43/208 (20%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSSGQGLQEFKN----LIAKLQHKNL 106
++++ +G G FG VY+ L D E +A+K++ + + FKN ++ KL H N+
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 76
Query: 107 VR------XXXXXXXXXXXXXICEYMPNKS------------------LDFLLFDSTRSV 142
VR + +Y+P + ++ RS+
Sbjct: 77 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 136
Query: 143 QLDWNRRMCIINGIARDHKMNP-----KISDFGMARVFGGNQSEANTNRVVGTYGYMAPE 197
+ +C + ++ ++P K+ DFG A+ + E N + + Y Y APE
Sbjct: 137 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-YRAPE 193
Query: 198 YALEGL-FSVKSDVFSFGVLLLEIISGR 224
++ DV+S G +L E++ G+
Sbjct: 194 LIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 86/208 (41%), Gaps = 43/208 (20%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSSGQGLQEFKN----LIAKLQHKNL 106
++++ +G G FG VY+ L D E +A+K++ + + FKN ++ KL H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 75
Query: 107 VR------XXXXXXXXXXXXXICEYMPNKS------------------LDFLLFDSTRSV 142
VR + +Y+P + ++ RS+
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 143 QLDWNRRMCIINGIARDHKMNP-----KISDFGMARVFGGNQSEANTNRVVGTYGYMAPE 197
+ +C + ++ ++P K+ DFG A+ + E N + + Y Y APE
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-YRAPE 192
Query: 198 YALEGL-FSVKSDVFSFGVLLLEIISGR 224
++ DV+S G +L E++ G+
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 86/208 (41%), Gaps = 43/208 (20%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSSGQGLQEFKN----LIAKLQHKNL 106
++++ +G G FG VY+ L D E +A+K++ + + FKN ++ KL H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 75
Query: 107 VR------XXXXXXXXXXXXXICEYMPNKS------------------LDFLLFDSTRSV 142
VR + +Y+P + ++ RS+
Sbjct: 76 VRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 143 QLDWNRRMCIINGIARDHKMNP-----KISDFGMARVFGGNQSEANTNRVVGTYGYMAPE 197
+ +C + ++ ++P K+ DFG A+ + E N + + Y Y APE
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-YRAPE 192
Query: 198 YALEGL-FSVKSDVFSFGVLLLEIISGR 224
++ DV+S G +L E++ G+
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG+A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 181 QVTDFGLAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 86/208 (41%), Gaps = 43/208 (20%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSSGQGLQEFKN----LIAKLQHKNL 106
++++ +G G FG VY+ L D E +A+K++ + + FKN ++ KL H N+
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 109
Query: 107 VR------XXXXXXXXXXXXXICEYMPNKS------------------LDFLLFDSTRSV 142
VR + +Y+P + ++ RS+
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 143 QLDWNRRMCIINGIARDHKMNP-----KISDFGMARVFGGNQSEANTNRVVGTYGYMAPE 197
+ +C + ++ ++P K+ DFG A+ + E N + + Y Y APE
Sbjct: 170 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRY-YRAPE 226
Query: 198 YALEGL-FSVKSDVFSFGVLLLEIISGR 224
++ DV+S G +L E++ G+
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 86/208 (41%), Gaps = 43/208 (20%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSSGQGLQEFKN----LIAKLQHKNL 106
++++ +G G FG VY+ L D E +A+K++ + + FKN ++ KL H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 75
Query: 107 VR------XXXXXXXXXXXXXICEYMPNKS------------------LDFLLFDSTRSV 142
VR + +Y+P + ++ RS+
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 143 QLDWNRRMCIINGIARDHKMNP-----KISDFGMARVFGGNQSEANTNRVVGTYGYMAPE 197
+ +C + ++ ++P K+ DFG A+ + E N + + Y Y APE
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-YRAPE 192
Query: 198 YALEGL-FSVKSDVFSFGVLLLEIISGR 224
++ DV+S G +L E++ G+
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGR 224
KI+DFG+ + G + A GT Y+APE + + D + GV++ E++ GR
Sbjct: 151 KITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 85/204 (41%), Gaps = 35/204 (17%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSSGQGLQEFKNLIAKLQHKNLVR-- 108
++++ +G G FG VY+ L D E +A+K++ + +E + ++ KL H N+VR
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQ-IMRKLDHCNIVRLR 79
Query: 109 ----XXXXXXXXXXXXXICEYMPNKS------------------LDFLLFDSTRSVQLDW 146
+ +Y+P + ++ RS+
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 147 NRRMCIINGIARDHKMNP-----KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
+ +C + ++ ++P K+ DFG A+ + E N + + Y Y APE
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY-YRAPELIFG 196
Query: 202 GL-FSVKSDVFSFGVLLLEIISGR 224
++ DV+S G +L E++ G+
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 86/208 (41%), Gaps = 43/208 (20%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSSGQGLQEFKN----LIAKLQHKNL 106
++++ +G G FG VY+ L D E +A+K++ + + FKN ++ KL H N+
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 83
Query: 107 VR------XXXXXXXXXXXXXICEYMPNKS------------------LDFLLFDSTRSV 142
VR + +Y+P + ++ RS+
Sbjct: 84 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 143
Query: 143 QLDWNRRMCIINGIARDHKMNP-----KISDFGMARVFGGNQSEANTNRVVGTYGYMAPE 197
+ +C + ++ ++P K+ DFG A+ + E N + + Y Y APE
Sbjct: 144 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-YRAPE 200
Query: 198 YALEGL-FSVKSDVFSFGVLLLEIISGR 224
++ DV+S G +L E++ G+
Sbjct: 201 LIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 85/204 (41%), Gaps = 35/204 (17%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSSGQGLQEFKNLIAKLQHKNLVR-- 108
++++ +G G FG VY+ L D E +A+K++ + +E + ++ KL H N+VR
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQ-IMRKLDHCNIVRLR 79
Query: 109 ----XXXXXXXXXXXXXICEYMPNKS------------------LDFLLFDSTRSVQLDW 146
+ +Y+P + ++ RS+
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 147 NRRMCIINGIARDHKMNP-----KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
+ +C + ++ ++P K+ DFG A+ + E N + + Y Y APE
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRY-YRAPELIFG 196
Query: 202 GL-FSVKSDVFSFGVLLLEIISGR 224
++ DV+S G +L E++ G+
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 86/208 (41%), Gaps = 43/208 (20%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSSGQGLQEFKN----LIAKLQHKNL 106
++++ +G G FG VY+ L D E +A+K++ + + FKN ++ KL H N+
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 94
Query: 107 VR------XXXXXXXXXXXXXICEYMPNKS------------------LDFLLFDSTRSV 142
VR + +Y+P + ++ RS+
Sbjct: 95 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 154
Query: 143 QLDWNRRMCIINGIARDHKMNP-----KISDFGMARVFGGNQSEANTNRVVGTYGYMAPE 197
+ +C + ++ ++P K+ DFG A+ + E N + + Y Y APE
Sbjct: 155 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-YRAPE 211
Query: 198 YALEGL-FSVKSDVFSFGVLLLEIISGR 224
++ DV+S G +L E++ G+
Sbjct: 212 LIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGR 224
KI+DFG+ + G + A GT Y+APE + + D + GV++ E++ GR
Sbjct: 149 KITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGR 224
KI+DFG+ + G + A GT Y+APE + + D + GV++ E++ GR
Sbjct: 150 KITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 35.0 bits (79), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 84/206 (40%), Gaps = 42/206 (20%)
Query: 53 FSNENKLGEGGFGPVYKGVLNDDKEIAVKRLSRSSGQGLQEFKN----LIAKLQHKNLVR 108
++N +G G FG V++ L + E+A+K++ + + FKN ++ ++H N+V
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQD-----KRFKNRELQIMRIVKHPNVVD 96
Query: 109 XXX------XXXXXXXXXXICEYMPN----KSLDFLLFDSTRSVQL------DWNRRMCI 152
+ EY+P S + T + L R +
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAY 156
Query: 153 INGIARDHK--------MNP-----KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYA 199
I+ I H+ ++P K+ DFG A++ E N + + Y Y APE
Sbjct: 157 IHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA--GEPNVSXICSRY-YRAPELI 213
Query: 200 LEGL-FSVKSDVFSFGVLLLEIISGR 224
++ D++S G ++ E++ G+
Sbjct: 214 FGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 162 MNPKISDFGMARV--FGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLE 219
M+ KI DFG+A F G + + + GT Y+APE + S + D++S G +L
Sbjct: 179 MDVKIGDFGLATKIEFDGERKKD----LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYT 234
Query: 220 IISGR 224
++ G+
Sbjct: 235 LLVGK 239
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 86/208 (41%), Gaps = 43/208 (20%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSSGQGLQEFKN----LIAKLQHKNL 106
++++ +G G FG VY+ L D E +A+K++ + + FKN ++ KL H N+
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 87
Query: 107 VR------XXXXXXXXXXXXXICEYMPNKS------------------LDFLLFDSTRSV 142
VR + +Y+P + ++ RS+
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 147
Query: 143 QLDWNRRMCIINGIARDHKMNP-----KISDFGMARVFGGNQSEANTNRVVGTYGYMAPE 197
+ +C + ++ ++P K+ DFG A+ + E N + + Y Y APE
Sbjct: 148 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-YRAPE 204
Query: 198 YALEGL-FSVKSDVFSFGVLLLEIISGR 224
++ DV+S G +L E++ G+
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 35.0 bits (79), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 85/204 (41%), Gaps = 35/204 (17%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSSGQGLQEFKNLIAKLQHKNLVR-- 108
++++ +G G FG VY+ L D E +A+K++ + +E + ++ KL H N+VR
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQ-IMRKLDHCNIVRLR 79
Query: 109 ----XXXXXXXXXXXXXICEYMPNKS------------------LDFLLFDSTRSVQLDW 146
+ +Y+P + ++ RS+
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 147 NRRMCIINGIARDHKMNP-----KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
+ +C + ++ ++P K+ DFG A+ + E N + + Y Y APE
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRY-YRAPELIFG 196
Query: 202 GL-FSVKSDVFSFGVLLLEIISGR 224
++ DV+S G +L E++ G+
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 86/208 (41%), Gaps = 43/208 (20%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSSGQGLQEFKN----LIAKLQHKNL 106
++++ +G G FG VY+ L D E +A+K++ + + FKN ++ KL H N+
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 87
Query: 107 VR------XXXXXXXXXXXXXICEYMPNKS------------------LDFLLFDSTRSV 142
VR + +Y+P + ++ RS+
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 147
Query: 143 QLDWNRRMCIINGIARDHKMNP-----KISDFGMARVFGGNQSEANTNRVVGTYGYMAPE 197
+ +C + ++ ++P K+ DFG A+ + E N + + Y Y APE
Sbjct: 148 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-YRAPE 204
Query: 198 YALEGL-FSVKSDVFSFGVLLLEIISGR 224
++ DV+S G +L E++ G+
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 86/208 (41%), Gaps = 43/208 (20%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSSGQGLQEFKN----LIAKLQHKNL 106
++++ +G G FG VY+ L D E +A+K++ + + FKN ++ KL H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 75
Query: 107 VR------XXXXXXXXXXXXXICEYMPNK------------------SLDFLLFDSTRSV 142
VR + +Y+P + ++ RS+
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 143 QLDWNRRMCIINGIARDHKMNP-----KISDFGMARVFGGNQSEANTNRVVGTYGYMAPE 197
+ +C + ++ ++P K+ DFG A+ + E N + + Y Y APE
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY-YRAPE 192
Query: 198 YALEGL-FSVKSDVFSFGVLLLEIISGR 224
++ DV+S G +L E++ G+
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 86/208 (41%), Gaps = 43/208 (20%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSSGQGLQEFKN----LIAKLQHKNL 106
++++ +G G FG VY+ L D E +A+K++ + + FKN ++ KL H N+
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 88
Query: 107 VR------XXXXXXXXXXXXXICEYMPNKS------------------LDFLLFDSTRSV 142
VR + +Y+P + ++ RS+
Sbjct: 89 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 148
Query: 143 QLDWNRRMCIINGIARDHKMNP-----KISDFGMARVFGGNQSEANTNRVVGTYGYMAPE 197
+ +C + ++ ++P K+ DFG A+ + E N + + Y Y APE
Sbjct: 149 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY-YRAPE 205
Query: 198 YALEGL-FSVKSDVFSFGVLLLEIISGR 224
++ DV+S G +L E++ G+
Sbjct: 206 LIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 34.7 bits (78), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 86/208 (41%), Gaps = 43/208 (20%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSSGQGLQEFKN----LIAKLQHKNL 106
++++ +G G FG VY+ L D E +A+K++ + + FKN ++ KL H N+
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 80
Query: 107 VR------XXXXXXXXXXXXXICEYMPNKS------------------LDFLLFDSTRSV 142
VR + +Y+P + ++ RS+
Sbjct: 81 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 140
Query: 143 QLDWNRRMCIINGIARDHKMNP-----KISDFGMARVFGGNQSEANTNRVVGTYGYMAPE 197
+ +C + ++ ++P K+ DFG A+ + E N + + Y Y APE
Sbjct: 141 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY-YRAPE 197
Query: 198 YALEGL-FSVKSDVFSFGVLLLEIISGR 224
++ DV+S G +L E++ G+
Sbjct: 198 LIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 93/246 (37%), Gaps = 39/246 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKL 101
A +F LG+G FG VY K I A+K L ++ L+ + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIA---- 157
+H N++R I EY P L + + + + D R I +A
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 158 ---------RDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYA 199
RD K KI+DFG + + + + GT Y+ PE
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEXI 183
Query: 200 LEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQ---SLLTYTWKLWCEGNAQELMD 256
K D++S GVL E + G+ Y++ S + +T+ + A++L+
Sbjct: 184 EGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 243
Query: 257 PVLKES 262
+LK +
Sbjct: 244 RLLKHN 249
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 156 IARDHKMNPKISDFGMAR--VFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSF 213
I +H+ + K++DFG+ + + G T+ GT YMAPE + + D +S
Sbjct: 152 IMLNHQGHVKLTDFGLCKESIHDGTV----THXFCGTIEYMAPEILMRSGHNRAVDWWSL 207
Query: 214 GVLLLEIISG 223
G L+ ++++G
Sbjct: 208 GALMYDMLTG 217
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 34.7 bits (78), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 79/194 (40%), Gaps = 30/194 (15%)
Query: 58 KLGEGGFGPVYK------GVLNDDKEIAVKRLSRSSGQGLQEFKNLIAKLQHKNLVRXXX 111
+LG+G F V + G K I K+LS Q L+ + L+H N+VR
Sbjct: 11 ELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 70
Query: 112 XXXXXXXXXXICEYMPNKSL--DFLL------FDSTRSVQ-LDWNRRMCIINGIA-RDHK 161
+ + + L D + D++ +Q + + C +NGI RD K
Sbjct: 71 SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLK 130
Query: 162 ------------MNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSD 209
K++DFG+A G+Q GT GY++PE + + D
Sbjct: 131 PENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGYLSPEVLRKDPYGKPVD 188
Query: 210 VFSFGVLLLEIISG 223
+++ GV+L ++ G
Sbjct: 189 MWACGVILYILLVG 202
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 34.7 bits (78), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 86/208 (41%), Gaps = 43/208 (20%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSSGQGLQEFKN----LIAKLQHKNL 106
++++ +G G FG VY+ L D E +A+K++ + + FKN ++ KL H N+
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 103
Query: 107 VR------XXXXXXXXXXXXXICEYMPNKS------------------LDFLLFDSTRSV 142
VR + +Y+P + ++ RS+
Sbjct: 104 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 163
Query: 143 QLDWNRRMCIINGIARDHKMNP-----KISDFGMARVFGGNQSEANTNRVVGTYGYMAPE 197
+ +C + ++ ++P K+ DFG A+ + E N + + Y Y APE
Sbjct: 164 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRY-YRAPE 220
Query: 198 YALEGL-FSVKSDVFSFGVLLLEIISGR 224
++ DV+S G +L E++ G+
Sbjct: 221 LIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 34.7 bits (78), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 156 IARDHKMNPKISDFGMAR--VFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSF 213
I +H+ + K++DFG+ + + G T+ GT YMAPE + + D +S
Sbjct: 152 IMLNHQGHVKLTDFGLCKESIHDGTV----THTFCGTIEYMAPEILMRSGHNRAVDWWSL 207
Query: 214 GVLLLEIISG 223
G L+ ++++G
Sbjct: 208 GALMYDMLTG 217
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 34.7 bits (78), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 86/208 (41%), Gaps = 43/208 (20%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSSGQGLQEFKN----LIAKLQHKNL 106
++++ +G G FG VY+ L D E +A+K++ + + FKN ++ KL H N+
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 109
Query: 107 VR------XXXXXXXXXXXXXICEYMPNKS------------------LDFLLFDSTRSV 142
VR + +Y+P + ++ RS+
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 143 QLDWNRRMCIINGIARDHKMNP-----KISDFGMARVFGGNQSEANTNRVVGTYGYMAPE 197
+ +C + ++ ++P K+ DFG A+ + E N + + Y Y APE
Sbjct: 170 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRY-YRAPE 226
Query: 198 YALEGL-FSVKSDVFSFGVLLLEIISGR 224
++ DV+S G +L E++ G+
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 34.7 bits (78), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 181 QVTDFGFAKRVKGR-----TWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 34.7 bits (78), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 86/208 (41%), Gaps = 43/208 (20%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSSGQGLQEFKN----LIAKLQHKNL 106
++++ +G G FG VY+ L D E +A+K++ + + FKN ++ KL H N+
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 154
Query: 107 VR------XXXXXXXXXXXXXICEYMPNKS------------------LDFLLFDSTRSV 142
VR + +Y+P + ++ RS+
Sbjct: 155 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 214
Query: 143 QLDWNRRMCIINGIARDHKMNP-----KISDFGMARVFGGNQSEANTNRVVGTYGYMAPE 197
+ +C + ++ ++P K+ DFG A+ + E N + + Y Y APE
Sbjct: 215 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRY-YRAPE 271
Query: 198 YALEGL-FSVKSDVFSFGVLLLEIISGR 224
++ DV+S G +L E++ G+
Sbjct: 272 LIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 79/194 (40%), Gaps = 30/194 (15%)
Query: 58 KLGEGGFGPVYK------GVLNDDKEIAVKRLSRSSGQGLQEFKNLIAKLQHKNLVRXXX 111
+LG+G F V + G K I K+LS Q L+ + L+H N+VR
Sbjct: 11 ELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 70
Query: 112 XXXXXXXXXXICEYMPNKSL--DFLL------FDSTRSVQ-LDWNRRMCIINGIA-RDHK 161
+ + + L D + D++ +Q + + C +NGI RD K
Sbjct: 71 SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLK 130
Query: 162 ------------MNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSD 209
K++DFG+A G+Q GT GY++PE + + D
Sbjct: 131 PENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGYLSPEVLRKDPYGKPVD 188
Query: 210 VFSFGVLLLEIISG 223
+++ GV+L ++ G
Sbjct: 189 MWACGVILYILLVG 202
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 34.7 bits (78), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 86/208 (41%), Gaps = 43/208 (20%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSSGQGLQEFKN----LIAKLQHKNL 106
++++ +G G FG VY+ L D E +A+K++ + + FKN ++ KL H N+
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 113
Query: 107 VR------XXXXXXXXXXXXXICEYMPNKS------------------LDFLLFDSTRSV 142
VR + +Y+P + ++ RS+
Sbjct: 114 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 173
Query: 143 QLDWNRRMCIINGIARDHKMNP-----KISDFGMARVFGGNQSEANTNRVVGTYGYMAPE 197
+ +C + ++ ++P K+ DFG A+ + E N + + Y Y APE
Sbjct: 174 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRY-YRAPE 230
Query: 198 YALEGL-FSVKSDVFSFGVLLLEIISGR 224
++ DV+S G +L E++ G+
Sbjct: 231 LIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 86/208 (41%), Gaps = 43/208 (20%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKE-IAVKRLSRSSGQGLQEFKN----LIAKLQHKNL 106
++++ +G G FG VY+ L D E +A+K++ + + FKN ++ KL H N+
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 111
Query: 107 VR------XXXXXXXXXXXXXICEYMPNKS------------------LDFLLFDSTRSV 142
VR + +Y+P + ++ RS+
Sbjct: 112 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 171
Query: 143 QLDWNRRMCIINGIARDHKMNP-----KISDFGMARVFGGNQSEANTNRVVGTYGYMAPE 197
+ +C + ++ ++P K+ DFG A+ + E N + + Y Y APE
Sbjct: 172 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRY-YRAPE 228
Query: 198 YALEGL-FSVKSDVFSFGVLLLEIISGR 224
++ DV+S G +L E++ G+
Sbjct: 229 LIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 156 IARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGV 215
I R K+ DFG A F + + ++ T Y APE L + V SD++SFG
Sbjct: 193 IYRTKSTGIKLIDFGCA-TFKSDYHGS----IINTRQYRAPEVILNLGWDVSSDMWSFGC 247
Query: 216 LLLEIISG 223
+L E+ +G
Sbjct: 248 VLAELYTG 255
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 34.7 bits (78), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 94/246 (38%), Gaps = 39/246 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKL 101
A +F LG+G FG VY K I A+K L ++ L+ + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIA---- 157
+H N++R I EY P L + + + + D R I +A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 158 ---------RDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYA 199
RD K KI++FG + + + + GT Y+ PE
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLPPEMI 181
Query: 200 LEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQ---SLLTYTWKLWCEGNAQELMD 256
+ K D++S GVL E + G+ Y++ S + +T+ + A++L+
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 241
Query: 257 PVLKES 262
+LK +
Sbjct: 242 RLLKHN 247
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 34.7 bits (78), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 159 DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLL 218
D + KI+DFG+ + G A GT Y+APE + + D + GV++
Sbjct: 139 DKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 196
Query: 219 EIISGR 224
E++ GR
Sbjct: 197 EMMCGR 202
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 83/208 (39%), Gaps = 41/208 (19%)
Query: 50 TRNFSNEN-----KLGEGGFGPVYKGVLNDDKE----IAVKRLSRSS------GQGLQEF 94
TR+F+ ++ LG+G FG VY L +K+ +A+K L +S L+
Sbjct: 17 TRHFTIDDFEIGRPLGKGKFGNVY---LAREKKSHFIVALKVLFKSQIEKEGVEHQLRRE 73
Query: 95 KNLIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLL-----FDSTRSVQL--DWN 147
+ A L H N++R I EY P L L FD R+ + +
Sbjct: 74 IEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELA 133
Query: 148 RRMCIING---IARDHK---------MNPKISDFGMARVFGGNQSEANTNRVVGTYGYMA 195
+ +G I RD K KI+DFG + + + GT Y+
Sbjct: 134 DALMYCHGKKVIHRDIKPENLLLGLKGELKIADFG----WSVHAPSLRRKTMCGTLDYLP 189
Query: 196 PEYALEGLFSVKSDVFSFGVLLLEIISG 223
PE + + K D++ GVL E++ G
Sbjct: 190 PEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 181 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGR 224
KI+DFG+ + G A GT Y+APE + + D + GV++ E++ GR
Sbjct: 150 KITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 34.7 bits (78), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 78/198 (39%), Gaps = 43/198 (21%)
Query: 59 LGEGGFGPV--YKGVLNDDKEIAVK-----RLSRSSGQGLQEFKNLIAKLQHKNLVRXXX 111
+G+G F V + +L KE+AVK +L+ SS Q L + L H N+V+
Sbjct: 22 IGKGNFAKVKLARHILTG-KEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFE 80
Query: 112 XXXXXXXXXXICEYMPN-KSLDFLLFDSTRSVQLDWNRRMCIINGIARDHK--------- 161
+ EY + D+L+ + + I++ + H+
Sbjct: 81 VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 162 ---------MNPKISDFGMARVFG-GNQSEANTNRVVGTYGYMAPEYALEGLFSVKS--- 208
N KI+DFG + F GN+ +A AP YA LF K
Sbjct: 141 AENLLLDADXNIKIADFGFSNEFTFGNKLDAFCG---------APPYAAPELFQGKKYDG 191
Query: 209 ---DVFSFGVLLLEIISG 223
DV+S GV+L ++SG
Sbjct: 192 PEVDVWSLGVILYTLVSG 209
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 34.7 bits (78), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 176 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 34.3 bits (77), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 174 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 34.3 bits (77), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 181 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 34.3 bits (77), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 168 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 34.3 bits (77), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 98/256 (38%), Gaps = 39/256 (15%)
Query: 49 ATRNFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKL 101
A +F LG+G FG VY K I A+K L ++ L+ + + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 102 QHKNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIA---- 157
+H N++R I EY P L + + + + D R I +A
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 158 ---------RDHKMNP---------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYA 199
RD K KI++FG + + + + GT Y+ PE
Sbjct: 125 YCHSKRVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLPPEMI 180
Query: 200 LEGLFSVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQ---SLLTYTWKLWCEGNAQELMD 256
+ K D++S GVL E + G+ Y++ S + +T+ + A++L+
Sbjct: 181 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 240
Query: 257 PVLKESFILEELLKRI 272
+LK + +L+ +
Sbjct: 241 RLLKHNPSQRPMLREV 256
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 34.3 bits (77), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 182 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 34.3 bits (77), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 181 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 34.3 bits (77), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 174 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 34.3 bits (77), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 181 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 34.3 bits (77), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 182 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 34.3 bits (77), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 181 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 182 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 181 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 181 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 181 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 181 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 34.3 bits (77), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGR 224
KI+DFG+ + G A GT Y+APE + + D + GV++ E++ GR
Sbjct: 145 KITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 34.3 bits (77), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 181 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 34.3 bits (77), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 181 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 34.3 bits (77), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 181 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 34.3 bits (77), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 181 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 34.3 bits (77), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 182 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 34.3 bits (77), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 181 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 34.3 bits (77), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 38/179 (21%)
Query: 165 KISDFGMARVFGGNQSEANTNR---VVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEII 221
KI DFG+A + E + R + GT Y+APE + S + DV+S G ++ ++
Sbjct: 181 KIGDFGLA-----TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL 235
Query: 222 SGRKDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFILEELLKRIHIGLLCVQE 281
G+ +E TY E + + ++PV + +++++L Q
Sbjct: 236 VGKPP-----FETSCLKETYLRIKKNEYSIPKHINPV--AASLIQKML----------QT 278
Query: 282 DPADRPTMSSVV--------FMLATDTITLLQPTQPAFSVGRVKSPSDLKVCSANEVTL 332
DP RPT++ ++ ++ A IT L P FS+ +PS L + +T+
Sbjct: 279 DPTARPTINELLNDEFFTSGYIPARLPITCLT-IPPRFSI----APSSLDPSNRKPLTV 332
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 34.3 bits (77), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 181 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 34.3 bits (77), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 181 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 34.3 bits (77), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 181 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 34.3 bits (77), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 182 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 34.3 bits (77), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGR 224
KI+DFG+ + G A GT Y+APE + + D + GV++ E++ GR
Sbjct: 145 KITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 34.3 bits (77), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 182 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 34.3 bits (77), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 181 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 34.3 bits (77), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 181 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 34.3 bits (77), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 167 QVTDFGFAKRVKGR-----TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 202 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 182 QVTDFGFAKRVKGR-----TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 159 DHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLL 218
D + KI+DFG+ + G A GT Y+APE + + D + GV++
Sbjct: 139 DKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 196
Query: 219 EIISGR 224
E++ GR
Sbjct: 197 EMMCGR 202
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 38/179 (21%)
Query: 165 KISDFGMARVFGGNQSEANTNR---VVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEII 221
KI DFG+A + E + R + GT Y+APE + S + DV+S G ++ ++
Sbjct: 179 KIGDFGLA-----TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL 233
Query: 222 SGRKDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFILEELLKRIHIGLLCVQE 281
G+ +E TY E + + ++PV + +++++L Q
Sbjct: 234 VGKPP-----FETSCLKETYLRIKKNEYSIPKHINPV--AASLIQKML----------QT 276
Query: 282 DPADRPTMSSVV--------FMLATDTITLLQPTQPAFSVGRVKSPSDLKVCSANEVTL 332
DP RPT++ ++ ++ A IT L P FS+ +PS L + +T+
Sbjct: 277 DPTARPTINELLNDEFFTSGYIPARLPITCLT-IPPRFSI----APSSLDPSNRKPLTV 330
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Query: 156 IARDHK--MNP--KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVF 211
I RD + +NP K+ DFG A + + + +V T Y APE L +S DV+
Sbjct: 164 IKRDERTLINPDIKVVDFGSA-----TYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVW 218
Query: 212 SFGVLLLEIISG 223
S G +L+E G
Sbjct: 219 SIGCILIEYYLG 230
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 87/214 (40%), Gaps = 45/214 (21%)
Query: 51 RNFSNENKLGEGGFGPVYKGVLNDDKEI-AVK--RLSRSSGQGLQEFKNLIAKL----QH 103
R +S ++G GG V++ VLN+ K+I A+K L + Q L ++N IA L QH
Sbjct: 28 RIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 86
Query: 104 KN-LVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIARDHKM 162
+ ++R + E N L+ L +S+ W R+ N + H +
Sbjct: 87 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL-KKKKSID-PWERKSYWKNMLEAVHTI 143
Query: 163 NP--------------------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEG 202
+ K+ DFG+A + + + VGT YM PE A++
Sbjct: 144 HQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE-AIKD 202
Query: 203 LFSVKS------------DVFSFGVLLLEIISGR 224
+ S + DV+S G +L + G+
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 181 QVTDFGFAKRVKGR-----TWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 202 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGR 224
KI+DFG+ + G A GT Y+APE + + D + GV++ E++ GR
Sbjct: 148 KITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGR 224
KI+DFG+ + G A GT Y+APE + + D + GV++ E++ GR
Sbjct: 145 KITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 10/64 (15%)
Query: 166 ISDFGMARVFG--GNQSEANTNRVVGTYGYMAPEYALEGLFSV-------KSDVFSFGVL 216
I+D G+A + NQ + N VGT YMAPE L+ V + D+++FG++
Sbjct: 154 IADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLV 212
Query: 217 LLEI 220
L E+
Sbjct: 213 LWEV 216
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 10/64 (15%)
Query: 166 ISDFGMARVFG--GNQSEANTNRVVGTYGYMAPEYALEGLFSV-------KSDVFSFGVL 216
I+D G+A + NQ + N VGT YMAPE L+ V + D+++FG++
Sbjct: 154 IADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLV 212
Query: 217 LLEI 220
L E+
Sbjct: 213 LWEV 216
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 78/200 (39%), Gaps = 37/200 (18%)
Query: 59 LGEGGFGPVYKGVLNDD------KEIAVKRLSRSSGQGLQEFK---NLIAKLQHKNLVRX 109
+G+G F V + + + K + V + + S G ++ K ++ L+H ++V
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 110 XXXXXXXXXXXXICEYMPNKSLDFLL-------FDSTRSVQLDWNR------RMCIINGI 156
+ E+M L F + F + +V + R R C N I
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNI 151
Query: 157 -------------ARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGL 203
++++ K+ DFG+A G +S VGT +MAPE
Sbjct: 152 IHRDVKPENVLLASKENSAPVKLGDFGVAIQLG--ESGLVAGGRVGTPHFMAPEVVKREP 209
Query: 204 FSVKSDVFSFGVLLLEIISG 223
+ DV+ GV+L ++SG
Sbjct: 210 YGKPVDVWGCGVILFILLSG 229
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 83/206 (40%), Gaps = 45/206 (21%)
Query: 52 NFSNENKLGEGGFGPV--YKGVLNDDKEIAVK-----RLSRSSGQGLQEFKNLIAKLQHK 104
N+ +G+G F V + +L +E+A+K +L+ +S Q L ++ L H
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTG-REVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 71
Query: 105 NLVRXXXXXXXXXXXXXICEYMPN-KSLDFLLFDS--------------TRSVQLDWNRR 149
N+V+ I EY + D+L+ +VQ +R
Sbjct: 72 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR 131
Query: 150 MCIINGIAR----DHKMNPKISDFGMARVF--GGNQSEANTNRVVGTYGYMAPEYALEGL 203
+ + A D MN KI+DFG + F GG + G+ Y APE L
Sbjct: 132 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG-----KLDTFCGSPPYAAPE-----L 181
Query: 204 FSVKS------DVFSFGVLLLEIISG 223
F K DV+S GV+L ++SG
Sbjct: 182 FQGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 81/214 (37%), Gaps = 53/214 (24%)
Query: 59 LGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKN---LIAKLQH----------- 103
LG+G FG V K D + A+K++ R + + L + L+A L H
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 104 --KNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLD--WNRRMCIINGIARD 159
+N V+ EY N++L L+ + Q D W I+ ++
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 160 HKM------------------NPKISDFGMARVFGGN------------QSEANTNRVVG 189
H N KI DFG+A+ + S N +G
Sbjct: 133 HSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIG 192
Query: 190 TYGYMAPEYALEGL--FSVKSDVFSFGVLLLEII 221
T Y+A E L+G ++ K D++S G++ E+I
Sbjct: 193 TAMYVATE-VLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 82/205 (40%), Gaps = 43/205 (20%)
Query: 52 NFSNENKLGEGGFGPV--YKGVLNDDKEIAVK-----RLSRSSGQGLQEFKNLIAKLQHK 104
N+ +G+G F V + +L +E+A+K +L+ +S Q L ++ L H
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTG-REVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 105 NLVRXXXXXXXXXXXXXICEYMPN-KSLDFLLFDS--------------TRSVQLDWNRR 149
N+V+ I EY + D+L+ +VQ +R
Sbjct: 75 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR 134
Query: 150 MCIINGIAR----DHKMNPKISDFGMARVFG-GNQSEANTNRVVGTYGYMAPEYALEGLF 204
+ + A D MN KI+DFG + F G + +A AP YA LF
Sbjct: 135 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCG---------APPYAAPELF 185
Query: 205 SVKS------DVFSFGVLLLEIISG 223
K DV+S GV+L ++SG
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 40/198 (20%)
Query: 58 KLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKLQHKNLVRXX 110
K+GEG +G V+K + EI A+KR+ L+E L+ +L+HKN+VR
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREI-CLLKELKHKNIVRLH 67
Query: 111 XXXXXXXXXXXICEYMP----------NKSLD------FLL-------FDSTRSV-QLDW 146
+ E+ N LD FL F +R+V D
Sbjct: 68 DVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDL 127
Query: 147 NRRMCIINGIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEG-LFS 205
+ +IN R+ ++ K+++FG+AR F G + VV T Y P+ L+S
Sbjct: 128 KPQNLLIN---RNGEL--KLANFGLARAF-GIPVRCYSAEVV-TLWYRPPDVLFGAKLYS 180
Query: 206 VKSDVFSFGVLLLEIISG 223
D++S G + E+ +
Sbjct: 181 TSIDMWSAGCIFAELANA 198
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 87/214 (40%), Gaps = 45/214 (21%)
Query: 51 RNFSNENKLGEGGFGPVYKGVLNDDKEI-AVK--RLSRSSGQGLQEFKNLIAKL----QH 103
R +S ++G GG V++ VLN+ K+I A+K L + Q L ++N IA L QH
Sbjct: 8 RIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 66
Query: 104 KN-LVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIARDHKM 162
+ ++R + E N L+ L +S+ W R+ N + H +
Sbjct: 67 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL-KKKKSID-PWERKSYWKNMLEAVHTI 123
Query: 163 NP--------------------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEG 202
+ K+ DFG+A + + + VGT YM PE A++
Sbjct: 124 HQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE-AIKD 182
Query: 203 LFSVKS------------DVFSFGVLLLEIISGR 224
+ S + DV+S G +L + G+
Sbjct: 183 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 216
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 165 KISDFGMARVFGGNQSEANTNRVV-GTYGYMAPEYALEGLFSVKSDVFSFGVLLLEI 220
K+ DFG+ G A V G YMAPE L+G + +DVFS G+ +LE+
Sbjct: 197 KLGDFGLLVELG----TAGAGEVQEGDPRYMAPEL-LQGSYGTAADVFSLGLTILEV 248
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ E+ +G
Sbjct: 202 QVTDFGFAKRVKGA-----TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
KI+DFG++++ + + V GT GY APE + + D++S G++ ++ G
Sbjct: 191 KIADFGLSKIV---EHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 10/64 (15%)
Query: 166 ISDFGMARVFG--GNQSEANTNRVVGTYGYMAPEYALEGLFSV-------KSDVFSFGVL 216
I+D G+A + NQ + N VGT YMAPE L+ V + D+++FG++
Sbjct: 183 IADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLV 241
Query: 217 LLEI 220
L E+
Sbjct: 242 LWEV 245
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 87/214 (40%), Gaps = 45/214 (21%)
Query: 51 RNFSNENKLGEGGFGPVYKGVLNDDKEI-AVK--RLSRSSGQGLQEFKNLIAKL----QH 103
R +S ++G GG V++ VLN+ K+I A+K L + Q L ++N IA L QH
Sbjct: 12 RIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 70
Query: 104 KN-LVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIARDHKM 162
+ ++R + E N L+ L +S+ W R+ N + H +
Sbjct: 71 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL-KKKKSID-PWERKSYWKNMLEAVHTI 127
Query: 163 NP--------------------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEG 202
+ K+ DFG+A + + + VGT YM PE A++
Sbjct: 128 HQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE-AIKD 186
Query: 203 LFSVKS------------DVFSFGVLLLEIISGR 224
+ S + DV+S G +L + G+
Sbjct: 187 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 220
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 87/215 (40%), Gaps = 47/215 (21%)
Query: 51 RNFSNENKLGEGGFGPVYKGVLNDDKEI-AVK--RLSRSSGQGLQEFKNLIAKL----QH 103
R +S ++G GG V++ VLN+ K+I A+K L + Q L ++N IA L QH
Sbjct: 56 RIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 114
Query: 104 KN-LVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLD-WNRRMCIINGIARDHK 161
+ ++R + E N L+ L + +D W R+ N + H
Sbjct: 115 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWERKSYWKNMLEAVHT 170
Query: 162 MNP--------------------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
++ K+ DFG+A + + + VGT YM PE A++
Sbjct: 171 IHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE-AIK 229
Query: 202 GLFSVKS------------DVFSFGVLLLEIISGR 224
+ S + DV+S G +L + G+
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 87/214 (40%), Gaps = 45/214 (21%)
Query: 51 RNFSNENKLGEGGFGPVYKGVLNDDKEI-AVK--RLSRSSGQGLQEFKNLIAKL----QH 103
R +S ++G GG V++ VLN+ K+I A+K L + Q L ++N IA L QH
Sbjct: 9 RIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 67
Query: 104 KN-LVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIARDHKM 162
+ ++R + E N L+ L +S+ W R+ N + H +
Sbjct: 68 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL-KKKKSID-PWERKSYWKNMLEAVHTI 124
Query: 163 NP--------------------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEG 202
+ K+ DFG+A + + + VGT YM PE A++
Sbjct: 125 HQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE-AIKD 183
Query: 203 LFSVKS------------DVFSFGVLLLEIISGR 224
+ S + DV+S G +L + G+
Sbjct: 184 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE + ++ D ++ GVL+ E+ +G
Sbjct: 181 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 34/161 (21%)
Query: 165 KISDFGMARVFGGNQSEANTNR---VVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEII 221
KI DFG+A + E + R + GT Y+APE + S + DV+S G ++ ++
Sbjct: 155 KIGDFGLA-----TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL 209
Query: 222 SGRKDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFILEELLKRIHIGLLCVQE 281
G+ +E TY E + + ++PV + +++++L Q
Sbjct: 210 VGKPP-----FETSCLKETYLRIKKNEYSIPKHINPV--AASLIQKML----------QT 252
Query: 282 DPADRPTMSSVV--------FMLATDTITLLQPTQPAFSVG 314
DP RPT++ ++ ++ A IT L P FS+
Sbjct: 253 DPTARPTINELLNDEFFTSGYIPARLPITCLT-IPPRFSIA 292
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 24/133 (18%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGR 224
KI DFG+ +++ R GT YM+PE + + D+++ G++L E++
Sbjct: 176 KIGDFGLVTSL---KNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVC 232
Query: 225 KDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFILEELLKRIHIGLLCVQEDPA 284
DT F + L +G ++ D KE +L++LL + P
Sbjct: 233 -DTAFETSKFFTDLR--------DGIISDIFDK--KEKTLLQKLLSK----------KPE 271
Query: 285 DRPTMSSVVFMLA 297
DRP S ++ L
Sbjct: 272 DRPNTSEILRTLT 284
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 59 LGEGGFGPVYKGVLN-DDKEIAVKRLSRSSGQGLQEFKNLIAKLQHKNLV 107
+G GGFG V+K D K ++R+ ++ + +E K L AKL H N+V
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKAL-AKLDHVNIV 68
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Query: 166 ISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGRK 225
I+DFG++++ + + GT GY+APE + +S D +S GV+ ++ G
Sbjct: 150 ITDFGLSKM----EQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYP 205
Query: 226 DTRFYLYEQGQSLL 239
YE+ +S L
Sbjct: 206 P----FYEETESKL 215
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 58/138 (42%), Gaps = 24/138 (17%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGR 224
KI DFG AR+ + T T Y APE + + D++S GV+L ++SG+
Sbjct: 149 KIIDFGFARLKPPDNQPLKT--PCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206
Query: 225 KDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFILE--------ELLKRIHIGL 276
++ LT T +A E+M + K F E + K + GL
Sbjct: 207 -----VPFQSHDRSLTCT-------SAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGL 254
Query: 277 LCVQEDPADRPTMSSVVF 294
L V DP R MS + +
Sbjct: 255 LTV--DPNKRLKMSGLRY 270
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+APE L ++ D ++ GVL+ ++ +G
Sbjct: 181 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 86/214 (40%), Gaps = 45/214 (21%)
Query: 51 RNFSNENKLGEGGFGPVYKGVLNDDKEI-AVK--RLSRSSGQGLQEFKNLIAKL----QH 103
R +S ++G GG V++ VLN+ K+I A+K L + Q L ++N IA L QH
Sbjct: 28 RIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 86
Query: 104 KN-LVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMCIINGIARDHKM 162
+ ++R + E N L+ L +S+ W R+ N + H +
Sbjct: 87 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL-KKKKSID-PWERKSYWKNMLEAVHTI 143
Query: 163 NP--------------------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEG 202
+ K+ DFG+A + + VGT YM PE A++
Sbjct: 144 HQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPE-AIKD 202
Query: 203 LFSVKS------------DVFSFGVLLLEIISGR 224
+ S + DV+S G +L + G+
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
K++DFG+A G+Q GT GY++PE + + D+++ GV+L ++ G
Sbjct: 146 KLADFGLAIEVQGDQQAWFG--FAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 24/133 (18%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGR 224
KI DFG+ +++ R GT YM+PE + + D+++ G++L E++
Sbjct: 162 KIGDFGLVTSL---KNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH-V 217
Query: 225 KDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFILEELLKRIHIGLLCVQEDPA 284
DT F + L +G ++ D KE +L++LL + P
Sbjct: 218 CDTAFETSKFFTDLR--------DGIISDIFDK--KEKTLLQKLLSK----------KPE 257
Query: 285 DRPTMSSVVFMLA 297
DRP S ++ L
Sbjct: 258 DRPNTSEILRTLT 270
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 59 LGEGGFGPVYKGVLN-DDKEIAVKRLSRSSGQGLQEFKNLIAKLQHKNLV 107
+G GGFG V+K D K +KR+ ++ + +E K L AKL H N+V
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKAL-AKLDHVNIV 67
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 87/215 (40%), Gaps = 47/215 (21%)
Query: 51 RNFSNENKLGEGGFGPVYKGVLNDDKEI-AVK--RLSRSSGQGLQEFKNLIAKL----QH 103
R +S ++G GG V++ VLN+ K+I A+K L + Q L ++N IA L QH
Sbjct: 56 RIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 114
Query: 104 KN-LVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLD-WNRRMCIINGIARDHK 161
+ ++R + E N L+ L + +D W R+ N + H
Sbjct: 115 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWERKSYWKNMLEAVHT 170
Query: 162 MNP--------------------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
++ K+ DFG+A + + + VGT YM PE A++
Sbjct: 171 IHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE-AIK 229
Query: 202 GLFSVKS------------DVFSFGVLLLEIISGR 224
+ S + DV+S G +L + G+
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 64/170 (37%), Gaps = 25/170 (14%)
Query: 77 EIAVKRLSRSSGQGLQEFKNLIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSL----- 131
E AVK + +S +E + L+ QH N++ + E M L
Sbjct: 49 EFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKIL 108
Query: 132 ----------DFLLFDSTRSV-----QLDWNRRMCIINGIARDHKMNP---KISDFGMAR 173
+LF T++V Q +R + N + D NP +I DFG A+
Sbjct: 109 RQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK 168
Query: 174 VFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
T T ++APE + D++S GVLL +++G
Sbjct: 169 QLRAENGLLMTP--CYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
++ DFG A + S +V T Y APE LE +S DV+S G ++ E G
Sbjct: 196 RVVDFGSATFDHEHHST-----IVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVG 249
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 166 ISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
ISDFG++++ + + GT GY+APE + +S D +S GV+ ++ G
Sbjct: 160 ISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 166 ISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
ISDFG++++ + + GT GY+APE + +S D +S GV+ ++ G
Sbjct: 160 ISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 9/69 (13%)
Query: 166 ISDFGMARVFGGNQS--EANTNRVVGTYGYMAPEYALEG-------LFSVKSDVFSFGVL 216
ISDFG+ + QS N N GT G+ APE E + D+FS G +
Sbjct: 169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV 228
Query: 217 LLEIISGRK 225
I+S K
Sbjct: 229 FYYILSKGK 237
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 166 ISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
ISDFG++++ + + GT GY+APE + +S D +S GV+ ++ G
Sbjct: 160 ISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 166 ISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
ISDFG++++ + + GT GY+APE + +S D +S GV+ ++ G
Sbjct: 160 ISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGR 224
+++DFG A E +T +V T Y PE LE ++ DV+S G +L E G
Sbjct: 182 RVADFGSATF----DHEHHTT-IVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGF 236
Query: 225 KDTRFYLYEQGQSLL 239
T F +E + L+
Sbjct: 237 --TLFQTHENREHLV 249
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGR 224
+++DFG A E +T +V T Y PE LE ++ DV+S G +L E G
Sbjct: 191 RVADFGSATF----DHEHHTT-IVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGF 245
Query: 225 KDTRFYLYEQGQSLL 239
T F +E + L+
Sbjct: 246 --TLFQTHENREHLV 258
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 8/63 (12%)
Query: 166 ISDFGMARVF--GGNQSEANTNRVVGTYGYMAPEYALEGLFS------VKSDVFSFGVLL 217
I+D G+A + G + + N VGT YMAPE E + + +D+++FG++L
Sbjct: 154 IADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVL 213
Query: 218 LEI 220
EI
Sbjct: 214 WEI 216
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 80/214 (37%), Gaps = 53/214 (24%)
Query: 59 LGEGGFGPVYKGVLN-DDKEIAVKRLSRSSGQGLQEFKN---LIAKLQH----------- 103
LG+G FG V K D + A+K++ R + + L + L+A L H
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVXLLASLNHQYVVRYYAAWL 72
Query: 104 --KNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLD--WNRRMCIINGIARD 159
+N V+ EY N++L L+ + Q D W I+ ++
Sbjct: 73 ERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 160 HKM------------------NPKISDFGMARVFGGN------------QSEANTNRVVG 189
H N KI DFG+A+ + S N +G
Sbjct: 133 HSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIG 192
Query: 190 TYGYMAPEYALEGL--FSVKSDVFSFGVLLLEII 221
T Y+A E L+G ++ K D +S G++ E I
Sbjct: 193 TAXYVATE-VLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 110/272 (40%), Gaps = 49/272 (18%)
Query: 59 LGEGGFGPVYKGVLNDDKEIAVKRLSRSSGQGLQEFKNLIA---KLQHKNLVRXXXXXXX 115
+G+G FG VY G + + I + + R + L+ FK + + +H+N+V
Sbjct: 41 IGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS 100
Query: 116 XXXXXXICEYMPNKSLDFLLFDSTRSVQLDWNRRMC--IINGIARDHKM----------- 162
I ++L ++ D+ + ++ R++ I+ G+ H
Sbjct: 101 PPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKN 160
Query: 163 ----NPK--ISDFGMARVFGGNQSEANTNRVV---GTYGYMAPEYALEGL---------F 204
N K I+DFG+ + G Q+ +++ G ++APE + F
Sbjct: 161 VFYDNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPF 220
Query: 205 SVKSDVFSFGVLLLEIISGRKDTRFYLYEQGQSLLTYTWKLWCEGNAQELMDPVLKESFI 264
S SDVF+ G + E+ R + ++ Q W++ G M P L + +
Sbjct: 221 SKHSDVFALGTIWYEL-----HAREWPFKT-QPAEAIIWQM---GTG---MKPNLSQIGM 268
Query: 265 LEELLKRIHIGLLCVQEDPADRPTMSSVVFML 296
+E+ I L C + +RPT + ++ ML
Sbjct: 269 GKEISD---ILLFCWAFEQEERPTFTKLMDML 297
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 82/215 (38%), Gaps = 56/215 (26%)
Query: 50 TRNFSNENKLGEGGFGPVYKGVLNDD------KEIAVKRLSRSSGQGLQEFKNLIAKLQH 103
T ++ +LG+G F V + V K I K+LS Q L+ + L+H
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 104 KNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFD-----------STRSVQLDWNRRMCI 152
N+VR + + + + +L+FD R + + CI
Sbjct: 90 PNIVR-------------LHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI 136
Query: 153 ------INGIARD---HK-MNP--------------KISDFGMARVFGGNQSEANTNRVV 188
+N I + H+ + P K++DFG+A G Q
Sbjct: 137 HQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFG--FA 194
Query: 189 GTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
GT GY++PE + + D+++ GV+L ++ G
Sbjct: 195 GTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 73/198 (36%), Gaps = 30/198 (15%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKLQHK 104
+F LG+G FG VY +K I A+K L +S L+ + + L+H
Sbjct: 15 DFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 105 NLVRXXXXXXXXXXXXXICEYMPNKSLDFLL-----FDSTRSV--------QLDWNRRMC 151
N++R + E+ P L L FD RS L +
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 134
Query: 152 IIN------GIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFS 205
+I+ + +K KI+DFG + + + GT Y+ PE
Sbjct: 135 VIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHD 190
Query: 206 VKSDVFSFGVLLLEIISG 223
K D++ GVL E + G
Sbjct: 191 EKVDLWCAGVLCYEFLVG 208
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISGR 224
+++DFG A E +T +V T Y PE LE ++ DV+S G +L E G
Sbjct: 214 RVADFGSATF----DHEHHTT-IVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGF 268
Query: 225 KDTRFYLYEQGQSLL 239
T F +E + L+
Sbjct: 269 --TLFQTHENREHLV 281
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 80/214 (37%), Gaps = 53/214 (24%)
Query: 59 LGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKN---LIAKLQH----------- 103
LG+G FG V K D + A+K++ R + + L + L+A L H
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 104 --KNLVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLD--WNRRMCIINGIARD 159
+N V+ EY N +L L+ + Q D W I+ ++
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 160 HKM------------------NPKISDFGMARVFGGN------------QSEANTNRVVG 189
H N KI DFG+A+ + S N +G
Sbjct: 133 HSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIG 192
Query: 190 TYGYMAPEYALEGL--FSVKSDVFSFGVLLLEII 221
T Y+A E L+G ++ K D++S G++ E+I
Sbjct: 193 TAMYVATE-VLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEII 221
K+ DFG++R + + + ++ +MAPE F+ SDV+ FGV + EI+
Sbjct: 151 KLGDFGLSR-YMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 44/203 (21%)
Query: 58 KLGEGGFGPVYKGVLNDD-KEIAVKR-LSRSSGQG-----LQEFKNLIAKLQHKNLVRXX 110
K+G+G FG V+K +++A+K+ L + +G L+E K ++ L+H+N+V
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK-ILQLLKHENVVNLI 83
Query: 111 XXXXXXXXXXXICE----------------YMPNKSLDFLLFDSTRSVQLDWN------- 147
C+ + N + F L + R +Q+ N
Sbjct: 84 EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR 143
Query: 148 -----RRMCIING-IARDHKMNPKISDFGMARVFG---GNQSEANTNRVVGTYGYMAPEY 198
R M N I RD + K++DFG+AR F +Q NRVV T Y PE
Sbjct: 144 NKILHRDMKAANVLITRDGVL--KLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPEL 200
Query: 199 AL-EGLFSVKSDVFSFGVLLLEI 220
L E + D++ G ++ E+
Sbjct: 201 LLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT Y+AP L ++ D ++ GVL+ E+ +G
Sbjct: 181 QVTDFGFAKRVKGR-----TWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVL 216
KI DFGM+R G ++GT Y+APE + +D+++ G++
Sbjct: 174 KIVDFGMSRKIG---HACELREIMGTPEYLAPEILNYDPITTATDMWNIGII 222
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 73/198 (36%), Gaps = 30/198 (15%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKLQHK 104
+F LG+G FG VY +K I A+K L +S L+ + + L+H
Sbjct: 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 105 NLVRXXXXXXXXXXXXXICEYMPNKSLDFLL-----FDSTRSV--------QLDWNRRMC 151
N++R + E+ P L L FD RS L +
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 134
Query: 152 IIN------GIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFS 205
+I+ + +K KI+DFG + + + GT Y+ PE
Sbjct: 135 VIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHD 190
Query: 206 VKSDVFSFGVLLLEIISG 223
K D++ GVL E + G
Sbjct: 191 EKVDLWCAGVLCYEFLVG 208
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Query: 163 NPKIS--DFGMA-RVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLE 219
NP+I DFG+A ++ GN+ + + GT ++APE +++D++S GV+
Sbjct: 148 NPRIKLIDFGIAHKIEAGNEFK----NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 203
Query: 220 IISGRKDTRFYLYEQGQSLLT 240
++SG +L E Q LT
Sbjct: 204 LLSGASP---FLGETKQETLT 221
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
Query: 163 NPKIS--DFGMA-RVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLE 219
NP+I DFG+A ++ GN+ + GT ++APE +++D++S GV+
Sbjct: 155 NPRIKLIDFGIAHKIEAGNE----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 210
Query: 220 IISGRKDTRFYLYEQGQSLLT 240
++SG +L E Q LT
Sbjct: 211 LLSGASP---FLGETKQETLT 228
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 73/198 (36%), Gaps = 30/198 (15%)
Query: 52 NFSNENKLGEGGFGPVYKGVLNDDKEI-AVKRLSRSS------GQGLQEFKNLIAKLQHK 104
+F LG+G FG VY +K I A+K L +S L+ + + L+H
Sbjct: 16 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 75
Query: 105 NLVRXXXXXXXXXXXXXICEYMPNKSLDFLL-----FDSTRSV--------QLDWNRRMC 151
N++R + E+ P L L FD RS L +
Sbjct: 76 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 135
Query: 152 IIN------GIARDHKMNPKISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFS 205
+I+ + +K KI+DFG + + + GT Y+ PE
Sbjct: 136 VIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHD 191
Query: 206 VKSDVFSFGVLLLEIISG 223
K D++ GVL E + G
Sbjct: 192 EKVDLWCAGVLCYEFLVG 209
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 64/172 (37%), Gaps = 25/172 (14%)
Query: 75 DKEIAVKRLSRSSGQGLQEFKNLIAKLQHKNLVRXXXXXXXXXXXXXICE---------- 124
+ E AVK + +S +E + L+ QH N++ + E
Sbjct: 47 NXEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDK 106
Query: 125 -----YMPNKSLDFLLFDSTRSV-----QLDWNRRMCIINGIARDHKMNP---KISDFGM 171
+ + +LF T++V Q +R + N + D NP +I DFG
Sbjct: 107 ILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGF 166
Query: 172 ARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
A+ T T ++APE + D++S GVLL ++G
Sbjct: 167 AKQLRAENGLLXTP--CYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 44/203 (21%)
Query: 58 KLGEGGFGPVYKGVLNDD-KEIAVKR-LSRSSGQG-----LQEFKNLIAKLQHKNLVRXX 110
K+G+G FG V+K +++A+K+ L + +G L+E K ++ L+H+N+V
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK-ILQLLKHENVVNLI 82
Query: 111 XXXXXXXXXXXICE----------------YMPNKSLDFLLFDSTRSVQLDWN------- 147
C+ + N + F L + R +Q+ N
Sbjct: 83 EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR 142
Query: 148 -----RRMCIING-IARDHKMNPKISDFGMARVFG---GNQSEANTNRVVGTYGYMAPEY 198
R M N I RD + K++DFG+AR F +Q NRVV T Y PE
Sbjct: 143 NKILHRDMKAANVLITRDGVL--KLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPEL 199
Query: 199 AL-EGLFSVKSDVFSFGVLLLEI 220
L E + D++ G ++ E+
Sbjct: 200 LLGERDYGPPIDLWGAGCIMAEM 222
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGL----FSVKSDVFSFGVLLLEI 220
K+ DFG++ G + + G YMAPE L +SVKSD++S G+ ++E+
Sbjct: 150 KMCDFGIS---GYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
Query: 156 IARDHK--MNP--KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVF 211
I RD + +NP K+ DFG A + + + +V Y APE L +S DV+
Sbjct: 164 IKRDERTLINPDIKVVDFGSA-----TYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVW 218
Query: 212 SFGVLLLEIISG 223
S G +L+E G
Sbjct: 219 SIGCILIEYYLG 230
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 44/203 (21%)
Query: 58 KLGEGGFGPVYKGVLNDD-KEIAVKR-LSRSSGQG-----LQEFKNLIAKLQHKNLVRXX 110
K+G+G FG V+K +++A+K+ L + +G L+E K ++ L+H+N+V
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK-ILQLLKHENVVNLI 83
Query: 111 XXXXXXXXXXXICE----------------YMPNKSLDFLLFDSTRSVQLDWN------- 147
C+ + N + F L + R +Q+ N
Sbjct: 84 EICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR 143
Query: 148 -----RRMCIING-IARDHKMNPKISDFGMARVFG---GNQSEANTNRVVGTYGYMAPEY 198
R M N I RD + K++DFG+AR F +Q NRVV T Y PE
Sbjct: 144 NKILHRDMKAANVLITRDGVL--KLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPEL 200
Query: 199 AL-EGLFSVKSDVFSFGVLLLEI 220
L E + D++ G ++ E+
Sbjct: 201 LLGERDYGPPIDLWGAGCIMAEM 223
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Query: 163 NPKIS--DFGMA-RVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLE 219
NP+I DFG+A ++ GN+ + + GT ++APE +++D++S GV+
Sbjct: 169 NPRIKLIDFGIAHKIEAGNEFK----NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 224
Query: 220 IISGRKDTRFYLYEQGQSLLT 240
++SG +L E Q LT
Sbjct: 225 LLSGASP---FLGETKQETLT 242
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 44/203 (21%)
Query: 58 KLGEGGFGPVYKGVLNDD-KEIAVKR-LSRSSGQG-----LQEFKNLIAKLQHKNLVRXX 110
K+G+G FG V+K +++A+K+ L + +G L+E K ++ L+H+N+V
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK-ILQLLKHENVVNLI 83
Query: 111 XXXXXXXXXXXICE----------------YMPNKSLDFLLFDSTRSVQLDWN------- 147
C+ + N + F L + R +Q+ N
Sbjct: 84 EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR 143
Query: 148 -----RRMCIING-IARDHKMNPKISDFGMARVFG---GNQSEANTNRVVGTYGYMAPEY 198
R M N I RD + K++DFG+AR F +Q NRVV T Y PE
Sbjct: 144 NKILHRDMKAANVLITRDGVL--KLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPEL 200
Query: 199 AL-EGLFSVKSDVFSFGVLLLEI 220
L E + D++ G ++ E+
Sbjct: 201 LLGERDYGPPIDLWGAGCIMAEM 223
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 165 KISDFGMARVFGGNQSEAN--TNRVVGTYGYMAPEYALE-GLFSVKSDVFSFGVLLLEII 221
KI DFGMAR + +E V T Y APE L ++ D++S G + E++
Sbjct: 199 KIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEML 258
Query: 222 SGRK 225
+ R+
Sbjct: 259 ARRQ 262
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 31.2 bits (69), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 KISDFGMA-RVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
KI DFG+A ++ GN+ + + GT ++APE +++D++S GV+ ++SG
Sbjct: 158 KIIDFGLAHKIDFGNEFK----NIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 165 KISDFGMARVFGGNQSEAN--TNRVVGTYGYMAPEYALE-GLFSVKSDVFSFGVLLLEII 221
KI DFGMAR + +E V T Y APE L ++ D++S G + E++
Sbjct: 198 KIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEML 257
Query: 222 SGRK 225
+ R+
Sbjct: 258 ARRQ 261
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEII 221
K+ DFG++R + + + ++ +MAPE F+ SDV+ FGV + EI+
Sbjct: 151 KLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 31.2 bits (69), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEII 221
K+ DFG++R + + + ++ +MAPE F+ SDV+ FGV + EI+
Sbjct: 151 KLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 31.2 bits (69), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 86/215 (40%), Gaps = 47/215 (21%)
Query: 51 RNFSNENKLGEGGFGPVYKGVLNDDKEI-AVK--RLSRSSGQGLQEFKNLIAKL----QH 103
R +S ++G GG V++ VLN+ K+I A+K L + Q L ++N IA L QH
Sbjct: 56 RIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 114
Query: 104 KN-LVRXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLD-WNRRMCIINGIARDHK 161
+ ++R + E N L+ L + +D W R+ N + H
Sbjct: 115 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWERKSYWKNMLEAVHT 170
Query: 162 MNP--------------------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALE 201
++ K+ DFG+A + + + VG YM PE A++
Sbjct: 171 IHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPE-AIK 229
Query: 202 GLFSVKS------------DVFSFGVLLLEIISGR 224
+ S + DV+S G +L + G+
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 31.2 bits (69), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEII 221
K+ DFG++R + + + ++ +MAPE F+ SDV+ FGV + EI+
Sbjct: 148 KLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 31.2 bits (69), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEII 221
K+ DFG++R + + + ++ +MAPE F+ SDV+ FGV + EI+
Sbjct: 151 KLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEII 221
K+ DFG++R + + + ++ +MAPE F+ SDV+ FGV + EI+
Sbjct: 153 KLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 30.8 bits (68), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
K++DFG+A G Q GT GY++PE + + D+++ GV+L ++ G
Sbjct: 153 KLADFGLAIEVEGEQQAWFG--FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEII 221
K+ DFG++R + + + ++ +MAPE F+ SDV+ FGV + EI+
Sbjct: 154 KLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
K++DFG+A G Q GT GY++PE + + D+++ GV+L ++ G
Sbjct: 164 KLADFGLAIEVEGEQQAWFG--FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
+++DFG A+ G T + GT +APE L ++ D ++ GVL+ E+ +G
Sbjct: 181 QVTDFGFAKRVKGR-----TWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEII 221
K+ DFG++R + + + ++ +MAPE F+ SDV+ FGV + EI+
Sbjct: 156 KLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 95/255 (37%), Gaps = 49/255 (19%)
Query: 9 REGRTGXXXXXEGYSYSILRGKKKVES-----------QELPLFPLDLIHEAT-RNFSNE 56
R+ R G +G I+RGK V S Q P P+++ H+ ++
Sbjct: 107 RKRRRGYDVDEQG---KIVRGKGTVSSNYDNYVFDIWKQYYPQ-PVEIKHDHVLDHYDIH 162
Query: 57 NKLGEGGFGPVYK----GVLNDDKEIAVKRLSRSSGQGLQEFKNLIAKLQHKNLVRXXXX 112
+LG G FG V++ N+ V S + +++ ++ L+H LV
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 222
Query: 113 XXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLD----WNRRMCIINGIARDHKMN----- 163
I E+M L + D + D + R++C G+ H+ N
Sbjct: 223 FEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVC--KGLCHMHENNYVHLD 280
Query: 164 --P-------------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKS 208
P K+ DFG+ QS T GT + APE A +
Sbjct: 281 LKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT---TGTAEFAAPEVAEGKPVGYYT 337
Query: 209 DVFSFGVLLLEIISG 223
D++S GVL ++SG
Sbjct: 338 DMWSVGVLSYILLSG 352
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEII 221
K+ DFG++R + + + ++ +MAPE F+ SDV+ FGV + EI+
Sbjct: 179 KLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 10/69 (14%)
Query: 165 KISDFGMAR--VFGGNQSEANTNRVV---GTYGYMAPE----YALEG-LFSVKSDVFSFG 214
KI DFG+ G+ S +T ++ G+ YMAPE ++ E ++ + D++S G
Sbjct: 154 KICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLG 213
Query: 215 VLLLEIISG 223
V+L ++SG
Sbjct: 214 VILYILLSG 222
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEII 221
K+ DFG++R + + + ++ +MAPE F+ SDV+ FGV + EI+
Sbjct: 531 KLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEII 221
K+ DFG++R + + + ++ +MAPE F+ SDV+ FGV + EI+
Sbjct: 531 KLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 95/255 (37%), Gaps = 49/255 (19%)
Query: 9 REGRTGXXXXXEGYSYSILRGKKKVES-----------QELPLFPLDLIHEAT-RNFSNE 56
R+ R G +G I+RGK V S Q P P+++ H+ ++
Sbjct: 1 RKRRRGYDVDEQG---KIVRGKGTVSSNYDNYVFDIWKQYYPQ-PVEIKHDHVLDHYDIH 56
Query: 57 NKLGEGGFGPVYK----GVLNDDKEIAVKRLSRSSGQGLQEFKNLIAKLQHKNLVRXXXX 112
+LG G FG V++ N+ V S + +++ ++ L+H LV
Sbjct: 57 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 116
Query: 113 XXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLD----WNRRMCIINGIARDHKMN----- 163
I E+M L + D + D + R++C G+ H+ N
Sbjct: 117 FEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVC--KGLCHMHENNYVHLD 174
Query: 164 --P-------------KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKS 208
P K+ DFG+ QS T GT + APE A +
Sbjct: 175 LKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT---TGTAEFAAPEVAEGKPVGYYT 231
Query: 209 DVFSFGVLLLEIISG 223
D++S GVL ++SG
Sbjct: 232 DMWSVGVLSYILLSG 246
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGL----FSVKSDVFSFGVLLLEI 220
K+ DFG++ + ++ G YMAPE L +SVKSD++S G+ ++E+
Sbjct: 194 KMCDFGISGYLVDSVAKTID---AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 68/177 (38%), Gaps = 31/177 (17%)
Query: 76 KEIAVKRLSRSSGQGLQEFK---NLIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLD 132
K + V + + S G ++ K ++ L+H ++V + E+M L
Sbjct: 57 KIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLC 116
Query: 133 FLL-------FDSTRSVQLDWNR------RMCIINGI-------------ARDHKMNPKI 166
F + F + +V + R R C N I ++++ K+
Sbjct: 117 FEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKL 176
Query: 167 SDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
FG+A G +S VGT +MAPE + DV+ GV+L ++SG
Sbjct: 177 GGFGVAIQLG--ESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 68/177 (38%), Gaps = 31/177 (17%)
Query: 76 KEIAVKRLSRSSGQGLQEFK---NLIAKLQHKNLVRXXXXXXXXXXXXXICEYMPNKSLD 132
K + V + + S G ++ K ++ L+H ++V + E+M L
Sbjct: 55 KIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLC 114
Query: 133 FLL-------FDSTRSVQLDWNR------RMCIINGI-------------ARDHKMNPKI 166
F + F + +V + R R C N I ++++ K+
Sbjct: 115 FEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKL 174
Query: 167 SDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
FG+A G +S VGT +MAPE + DV+ GV+L ++SG
Sbjct: 175 GGFGVAIQLG--ESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 KISDFGMA-RVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
KI DFG+A ++ GN+ + + GT ++APE +++D++S GV+ ++SG
Sbjct: 158 KIIDFGLAHKIDFGNEFK----NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 KISDFGMA-RVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
KI DFG+A ++ GN+ + + GT ++APE +++D++S GV+ ++SG
Sbjct: 158 KIIDFGLAHKIDFGNEFK----NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 KISDFGMA-RVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
KI DFG+A ++ GN+ + + GT ++APE +++D++S GV+ ++SG
Sbjct: 158 KIIDFGLAHKIDFGNEFK----NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 KISDFGMA-RVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
KI DFG+A ++ GN+ + + GT ++APE +++D++S GV+ ++SG
Sbjct: 157 KIIDFGLAHKIDFGNEFK----NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 KISDFGMA-RVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
KI DFG+A ++ GN+ + + GT ++APE +++D++S GV+ ++SG
Sbjct: 158 KIIDFGLAHKIDFGNEFK----NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 KISDFGMA-RVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
KI DFG+A ++ GN+ + + GT ++APE +++D++S GV+ ++SG
Sbjct: 157 KIIDFGLAHKIDFGNEFK----NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 KISDFGMA-RVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
KI DFG+A ++ GN+ + + GT ++APE +++D++S GV+ ++SG
Sbjct: 158 KIIDFGLAHKIDFGNEFK----NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 KISDFGMA-RVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
KI DFG+A ++ GN+ + + GT ++APE +++D++S GV+ ++SG
Sbjct: 158 KIIDFGLAHKIDFGNEFK----NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 KISDFGMA-RVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
KI DFG+A ++ GN+ + + GT ++APE +++D++S GV+ ++SG
Sbjct: 158 KIIDFGLAHKIDFGNEFK----NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 KISDFGMA-RVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
KI DFG+A ++ GN+ + + GT ++APE +++D++S GV+ ++SG
Sbjct: 158 KIIDFGLAHKIDFGNEFK----NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 KISDFGMA-RVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
KI DFG+A ++ GN+ + + GT ++APE +++D++S GV+ ++SG
Sbjct: 158 KIIDFGLAHKIDFGNEFK----NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 KISDFGMA-RVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
KI DFG+A ++ GN+ + + GT ++APE +++D++S GV+ ++SG
Sbjct: 158 KIIDFGLAHKIDFGNEFK----NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 11/99 (11%)
Query: 59 LGEGGFGPVYKGVLND--------DKEIAVKRLS---RSSGQGLQEFKNLIAKLQHKNLV 107
LG+G F ++KGV + + E+ +K L R+ + E ++++KL HK+LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 108 RXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDW 146
+ E++ SLD L + + + W
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW 114
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 165 KISDFGMA-RVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
KI DFG+A ++ GN+ + + GT ++APE +++D++S GV+ ++SG
Sbjct: 158 KIIDFGLAHKIDFGNEFK----NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 59 LGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKN 96
LG GGFG VY G+ ++D+ +A+K + + E N
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 82
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine
Threonine Kinase (Pim1) In Complex With A Consensus
Peptide And A Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine
Threonine Kinase (Pim1) In Complex With A Consensus
Peptide And A Beta Carboline Ligand Ii
Length = 314
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 59 LGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKN 96
LG GGFG VY G+ ++D+ +A+K + + E N
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 83
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine
Threonine Kinase (Pim1) In Complex With A Consensus
Peptide And A Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine
Threonine Kinase (Pim1) In Complex With A Consensus
Peptide And A Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 59 LGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKN 96
LG GGFG VY G+ ++D+ +A+K + + E N
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 83
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 59 LGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKN 96
LG GGFG VY G+ ++D+ +A+K + + E N
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 97
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With
Amppnp And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 59 LGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKN 96
LG GGFG VY G+ ++D+ +A+K + + E N
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 82
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine
Threonine Kinase (Pim1) In Complex With A Consensus
Peptide And A Naphtho-Difuran Ligand
Length = 313
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 59 LGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKN 96
LG GGFG VY G+ ++D+ +A+K + + E N
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 83
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine
Threonine Kinase (Pim1) In Complex With A Consensus
Peptide And The Jnk Inhibitor V
Length = 314
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 59 LGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKN 96
LG GGFG VY G+ ++D+ +A+K + + E N
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 83
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 59 LGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKN 96
LG GGFG VY G+ ++D+ +A+K + + E N
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 82
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 59 LGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKN 96
LG GGFG VY G+ ++D+ +A+K + + E N
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 82
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 59 LGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKN 96
LG GGFG VY G+ ++D+ +A+K + + E N
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 50
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 59 LGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKN 96
LG GGFG VY G+ ++D+ +A+K + + E N
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 55
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 59 LGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKN 96
LG GGFG VY G+ ++D+ +A+K + + E N
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 54
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 59 LGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKN 96
LG GGFG VY G+ ++D+ +A+K + + E N
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 50
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones
As Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones
As Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones
As Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 59 LGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKN 96
LG GGFG VY G+ ++D+ +A+K + + E N
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 55
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 59 LGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKN 96
LG GGFG VY G+ ++D+ +A+K + + E N
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 102
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 59 LGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKN 96
LG GGFG VY G+ ++D+ +A+K + + E N
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 97
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With
Amp-Pnp At 2.1 A Resolution
Length = 300
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 59 LGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKN 96
LG GGFG VY G+ ++D+ +A+K + + E N
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 69
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A
Target Of Aberrant Somatic Hypermutations In Diffuse
Large Cell Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 59 LGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKN 96
LG GGFG VY G+ ++D+ +A+K + + E N
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 54
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 59 LGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKN 96
LG GGFG VY G+ ++D+ +A+K + + E N
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 50
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 59 LGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKN 96
LG GGFG VY G+ ++D+ +A+K + + E N
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 69
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 59 LGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKN 96
LG GGFG VY G+ ++D+ +A+K + + E N
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 53
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 59 LGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKN 96
LG GGFG VY G+ ++D+ +A+K + + E N
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 70
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 59 LGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKN 96
LG GGFG VY G+ ++D+ +A+K + + E N
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 70
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 59 LGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKN 96
LG GGFG VY G+ ++D+ +A+K + + E N
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 70
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 168 DFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
DFG+A ++ VGT Y APE E + ++D+++ +L E ++G
Sbjct: 177 DFGIASATT-DEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTG 231
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence
Of P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 59 LGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKN 96
LG GGFG VY G+ ++D+ +A+K + + E N
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 89
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 11/99 (11%)
Query: 59 LGEGGFGPVYKGVLND--------DKEIAVKRLS---RSSGQGLQEFKNLIAKLQHKNLV 107
LG+G F ++KGV + + E+ +K L R+ + E ++++KL HK+LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 108 RXXXXXXXXXXXXXICEYMPNKSLDFLLFDSTRSVQLDW 146
+ E++ SLD L + + + W
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW 114
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With
Inhibitor (Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With
Inhibitor (Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 59 LGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKN 96
LG GGFG VY G+ ++D+ +A+K + + E N
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 55
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 59 LGEGGFGPVYKGV-LNDDKEIAVKRLSRSSGQGLQEFKN 96
LG GGFG VY G+ ++D+ +A+K + + E N
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 77
>pdb|2R2F|A Chain A, Ribonucleotide Reductase R2f Protein From Salmonella
Typhimurium (Oxidized)
pdb|2R2F|B Chain B, Ribonucleotide Reductase R2f Protein From Salmonella
Typhimurium (Oxidized)
pdb|1R2F|A Chain A, Ribonucleotide Reductase R2f Protein From Salmonella
Typhimurium
pdb|1R2F|B Chain B, Ribonucleotide Reductase R2f Protein From Salmonella
Typhimurium
pdb|2BQ1|I Chain I, Ribonucleotide Reductase Class 1b Holocomplex R1e,R2f From
Salmonella Typhimurium
pdb|2BQ1|J Chain J, Ribonucleotide Reductase Class 1b Holocomplex R1e,R2f From
Salmonella Typhimurium
Length = 319
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Query: 21 GYSYSI-LRGKKKVESQELPLFPLDLIHEATRNFSNENKLGEGGFGPVYKGVLNDDK 76
GY Y I L+ +E +EL LF LDL+ E + NE + E + G +ND K
Sbjct: 200 GYKYQIALQKLSAIEREELKLFALDLLMEL---YDNEIRYTEALYAET--GWVNDVK 251
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 80/205 (39%), Gaps = 39/205 (19%)
Query: 58 KLGEGGFGPVYKGVLNDDKEIAVKRLSRSSGQGLQEFK----NLIAKLQHKNLV--RXXX 111
K+G G +G VYK D K+ L + G G+ L+ +L+H N++ +
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVF 87
Query: 112 XXXXXXXXXXICEYMPN--------------------------KSLDFLLFDSTRSVQLD 145
+ +Y + KSL + + D + +
Sbjct: 88 LSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN 147
Query: 146 W--NRRMCIINGIAR---DHKMNPKISDFGMARVFGGN-QSEANTNRVVGTYGYMAPEYA 199
W +R + N + + KI+D G AR+F + A+ + VV T+ Y APE
Sbjct: 148 WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELL 207
Query: 200 LEGLFSVKS-DVFSFGVLLLEIISG 223
L K+ D+++ G + E+++
Sbjct: 208 LGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 28.1 bits (61), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
K+ DFG+A N + GT ++APE +++D++S GV+ ++SG
Sbjct: 159 KLIDFGLAHEIEDGVEFKN---IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3GUG|A Chain A, Crystal Structure Of Akr1c1 L308v Mutant In Complex With
Nadp And 3,5-Dichlorosalicylic Acid
Length = 323
Score = 28.1 bits (61), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 241 YTWKLWCEGNAQELMDPVLKESF 263
YT KLWC + EL+ P L+ S
Sbjct: 81 YTSKLWCNSHRPELVRPALERSL 103
>pdb|3C3U|A Chain A, Crystal Structure Of Akr1c1 In Complex With Nadp And 3,5-
Dichlorosalicylic Acid
pdb|3NTY|A Chain A, Crystal Structure Of Akr1c1 In Complex With Nadp And
5-Phenyl,3- Chlorosalicylic Acid
Length = 323
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 241 YTWKLWCEGNAQELMDPVLKESF 263
YT KLWC + EL+ P L+ S
Sbjct: 81 YTSKLWCNSHRPELVRPALERSL 103
>pdb|1MRQ|A Chain A, Crystal Structure Of Human 20alpha-hsd In Ternary Complex
With Nadp And 20alpha-hydroxy-progesterone
Length = 323
Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 241 YTWKLWCEGNAQELMDPVLKESF 263
YT KLWC + EL+ P L+ S
Sbjct: 81 YTSKLWCNSHRPELVRPALERSL 103
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 27.7 bits (60), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
K+ DFG+A N + GT ++APE +++D++S GV+ ++SG
Sbjct: 159 KLIDFGLAHEIEDGVEFKN---IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 27.7 bits (60), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 165 KISDFGMARVFGGNQSEANTNRVVGTYGYMAPEYALEGLFSVKSDVFSFGVLLLEIISG 223
K+ DFG+A N + GT ++APE +++D++S GV+ ++SG
Sbjct: 159 KLIDFGLAHEIEDGVEFKN---IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,159,432
Number of Sequences: 62578
Number of extensions: 368839
Number of successful extensions: 2102
Number of sequences better than 100.0: 851
Number of HSP's better than 100.0 without gapping: 471
Number of HSP's successfully gapped in prelim test: 380
Number of HSP's that attempted gapping in prelim test: 1023
Number of HSP's gapped (non-prelim): 1093
length of query: 338
length of database: 14,973,337
effective HSP length: 99
effective length of query: 239
effective length of database: 8,778,115
effective search space: 2097969485
effective search space used: 2097969485
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)