STRING 9.05 
  EMB2730 protein (Arabidopsis thaliana) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
EMB2730
EMB2730 (EMBRYO DEFECTIVE 2730); 3'-5'-exoribonuclease/ RNA binding / ribonuclease; Encodes a exoribonuclease involved in rRNA processing in mitochondria and chloroplasts.Loss of function mutations are pale green and require supplementation with sucrose for germination and early development. Plants are pale green due to defects in chloroplast biogenesis. (803 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
RIF10
RIF10 (resistant to inhibition with FSM 10); 3'-5'-exoribonuclease/ RNA binding / nucleic acid [...] (922 aa)
      0.746
AT2G32320
unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unkn [...] (537 aa)
       0.679
AT2G31580
unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unkn [...] (567 aa)
       0.679
AT5G14580
polyribonucleotide nucleotidyltransferase, putative; polyribonucleotide nucleotidyltransferase, [...] (991 aa)
       0.677
AT5G02240
binding / catalytic/ coenzyme binding; Protein is tyrosine-phosphorylated and its phosphorylati [...] (253 aa)
       0.621
SAE1A
SAE1A (SUMO-ACTIVATING ENZYME 1A); SUMO activating enzyme; Encodes one of the two subunits of t [...] (322 aa)
       0.599
RNL
RNL (RNA LIGASE); 2',3'-cyclic-nucleotide 3'-phosphodiesterase/ RNA ligase (ATP)/ polynucleotid [...] (1104 aa)
       0.565
SAE2
SAE2 (SUMO-ACTIVATING ENZYME 2); SUMO activating enzyme; Encodes one of the two subunits of the [...] (700 aa)
       0.563
AT1G77680
ribonuclease II family protein; ribonuclease II family protein; FUNCTIONS IN- ribonuclease acti [...] (1055 aa)
     0.558
AT5G02710
unknown protein; unknown protein; LOCATED IN- chloroplast; EXPRESSED IN- 21 plant structures; E [...] (176 aa)
      0.549
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
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