BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045274
(156 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225440376|ref|XP_002266667.1| PREDICTED: uncharacterized ribonuclease sll1290-like [Vitis
vinifera]
Length = 792
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/145 (63%), Positives = 114/145 (78%), Gaps = 5/145 (3%)
Query: 1 MAVRAVNSCSMFRSAACPPLVSFKIQCCYYHFRSLQLRRKSNLGFRLPACRSERQFLNRS 60
MAVRAVN+CS+FRS + PPL F+ C +HF + Q + NLG P CR++R FL+
Sbjct: 1 MAVRAVNTCSIFRSTSSPPLYPFR--CRLHHFGAFQCKSYPNLGLHFPICRTDRVFLSHG 58
Query: 61 GSQSCSVHSLVDSVMQELVAIRKRLRVFAKVKV---SSGELLEDKLENQVLQKGLLLEFK 117
G QSCSV+SLV+SVM+EL A RKR R++A K+ SSG+LLEDKL+NQVLQKGLLLEF+
Sbjct: 59 GVQSCSVYSLVESVMEELHASRKRKRIYASTKMGLTSSGQLLEDKLKNQVLQKGLLLEFR 118
Query: 118 KDSDRVLLAVAQRPDGKKNWMVYDQ 142
KDS+RVLLAVAQ+ DGKKNWMV+DQ
Sbjct: 119 KDSERVLLAVAQKADGKKNWMVFDQ 143
>gi|147810722|emb|CAN71797.1| hypothetical protein VITISV_026278 [Vitis vinifera]
Length = 754
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/145 (63%), Positives = 114/145 (78%), Gaps = 5/145 (3%)
Query: 1 MAVRAVNSCSMFRSAACPPLVSFKIQCCYYHFRSLQLRRKSNLGFRLPACRSERQFLNRS 60
MAVRAVN+CS+FRS + PPL F+ C +HF + Q + NLG P CR++R FL+
Sbjct: 351 MAVRAVNTCSIFRSTSSPPLYPFR--CRLHHFGAFQCKSYPNLGLHFPICRTDRXFLSHG 408
Query: 61 GSQSCSVHSLVDSVMQELVAIRKRLRVFAKVKV---SSGELLEDKLENQVLQKGLLLEFK 117
G QSCSV+SLV+SVM+EL A RKR R++A K+ SSG+LLEDKL+NQVLQKGLLLEF+
Sbjct: 409 GVQSCSVYSLVESVMEELHASRKRKRIYASTKMGLTSSGQLLEDKLKNQVLQKGLLLEFR 468
Query: 118 KDSDRVLLAVAQRPDGKKNWMVYDQ 142
KDS+RVLLAVAQ+ DGKKNWMV+DQ
Sbjct: 469 KDSERVLLAVAQKADGKKNWMVFDQ 493
>gi|255586753|ref|XP_002533996.1| ribonuclease II, putative [Ricinus communis]
gi|223526007|gb|EEF28385.1| ribonuclease II, putative [Ricinus communis]
Length = 731
Score = 144 bits (364), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 82/146 (56%), Positives = 106/146 (72%), Gaps = 9/146 (6%)
Query: 1 MAVRAVNSCSMFRSAACPPLVSFKIQCCYYHFRSLQLRRKSNLGFRLPACRSERQF-LNR 59
MAVRAVN+CS+ + PP F ++C F++L+ + SNL R P R E QF +
Sbjct: 2 MAVRAVNTCSILHFSKAPPF--FLVRC---RFKTLRFCQYSNLSSRRPIIRCESQFQFHG 56
Query: 60 SGSQSCSVHSLVDSVMQELVAIRK--RLRVFAKVKVS-SGELLEDKLENQVLQKGLLLEF 116
+ +S SV SLVDSVM+EL ++RK R RV +K++ SGELL+DKL N+ L+KGLLLEF
Sbjct: 57 TNIRSFSVQSLVDSVMEELASLRKSRRKRVCPAIKLTGSGELLDDKLVNRPLEKGLLLEF 116
Query: 117 KKDSDRVLLAVAQRPDGKKNWMVYDQ 142
KKD+DR+LLAVA+RPDGKKNWMVYDQ
Sbjct: 117 KKDTDRILLAVARRPDGKKNWMVYDQ 142
>gi|42567593|ref|NP_195845.2| Ribonuclease II/R family protein [Arabidopsis thaliana]
gi|75127176|sp|Q6NQJ6.1|RNR1_ARATH RecName: Full=Ribonuclease II, chloroplastic/mitochondrial;
Short=AtmtRNaseII; Short=RNase II; AltName: Full=Protein
EMBRYO DEFECTIVE 2730; AltName: Full=Ribonucleotide
reductase 1; Flags: Precursor
gi|34222082|gb|AAQ62877.1| At5g02250 [Arabidopsis thaliana]
gi|51970908|dbj|BAD44146.1| ribonuclease II-like protein [Arabidopsis thaliana]
gi|332003067|gb|AED90450.1| Ribonuclease II/R family protein [Arabidopsis thaliana]
Length = 803
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/154 (52%), Positives = 102/154 (66%), Gaps = 14/154 (9%)
Query: 1 MAVRAVNSCSMFR---SAACPPLVSFKIQCCYYHFRSLQLRRKSNLGFRLPACRSERQFL 57
M+VRA+N CS+ R SA PP+ F+ + R+ LR S L P R++R+FL
Sbjct: 2 MSVRAINGCSIIRTATSAGGPPVSLFRHRI--QRLRASHLREFSKLRLNFPLIRADRRFL 59
Query: 58 NRSGSQSCS--VHSLVDSVMQELVAIRKR----LRVFAKVKV---SSGELLEDKLENQVL 108
S + SCS +HSLV+SV +EL +I +R +RV A VKV S GE+LEDKL NQ L
Sbjct: 60 GNSDAPSCSTCIHSLVESVSEELESISRRKGSRMRVRASVKVKLTSYGEVLEDKLVNQEL 119
Query: 109 QKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
+ GLLLEFKKD+DRVLLAV R DGKKNWMV+DQ
Sbjct: 120 EAGLLLEFKKDADRVLLAVLHRRDGKKNWMVFDQ 153
>gi|7406421|emb|CAB85530.1| ribonuclease II-like protein [Arabidopsis thaliana]
Length = 782
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/154 (52%), Positives = 102/154 (66%), Gaps = 14/154 (9%)
Query: 1 MAVRAVNSCSMFR---SAACPPLVSFKIQCCYYHFRSLQLRRKSNLGFRLPACRSERQFL 57
M+VRA+N CS+ R SA PP+ F+ + R+ LR S L P R++R+FL
Sbjct: 2 MSVRAINGCSIIRTATSAGGPPVSLFRHRI--QRLRASHLREFSKLRLNFPLIRADRRFL 59
Query: 58 NRSGSQSCS--VHSLVDSVMQELVAIRKR----LRVFAKVKV---SSGELLEDKLENQVL 108
S + SCS +HSLV+SV +EL +I +R +RV A VKV S GE+LEDKL NQ L
Sbjct: 60 GNSDAPSCSTCIHSLVESVSEELESISRRKGSRMRVRASVKVKLTSYGEVLEDKLVNQEL 119
Query: 109 QKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
+ GLLLEFKKD+DRVLLAV R DGKKNWMV+DQ
Sbjct: 120 EAGLLLEFKKDADRVLLAVLHRRDGKKNWMVFDQ 153
>gi|297806163|ref|XP_002870965.1| EMB2730 [Arabidopsis lyrata subsp. lyrata]
gi|297316802|gb|EFH47224.1| EMB2730 [Arabidopsis lyrata subsp. lyrata]
Length = 803
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/154 (51%), Positives = 101/154 (65%), Gaps = 14/154 (9%)
Query: 1 MAVRAVNSCSMFR---SAACPPLVSFKIQCCYYHFRSLQLRRKSNLGFRLPACRSERQFL 57
++VRA+N CS+ R SA PP+ F+ + R+ LR S LG P RS R+ L
Sbjct: 2 ISVRAINGCSIIRTATSAGGPPVSLFRHRI--QRLRASHLREFSKLGLNFPLLRSNRRSL 59
Query: 58 NRSGSQSCS--VHSLVDSVMQELVAIRKR----LRVFAKVKV---SSGELLEDKLENQVL 108
+ + SCS +HSLV+SV +EL +I +R +RV A VKV S GE+LEDKL NQ L
Sbjct: 60 GNNDAPSCSSCIHSLVESVSEELGSISRRKGSRIRVRASVKVKLTSYGEVLEDKLVNQEL 119
Query: 109 QKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
+ GLLLEFKKD++RVLLAV R DGKKNWMV+DQ
Sbjct: 120 EAGLLLEFKKDAERVLLAVVHRRDGKKNWMVFDQ 153
>gi|224090693|ref|XP_002309062.1| predicted protein [Populus trichocarpa]
gi|222855038|gb|EEE92585.1| predicted protein [Populus trichocarpa]
Length = 792
Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/149 (50%), Positives = 100/149 (67%), Gaps = 10/149 (6%)
Query: 1 MAVRAVNSCSMFRSAACPPLVSFKIQCCYYHFR----SLQLRRKSNLGFRLPACRSERQF 56
++VRAVNSCS+FRS+ PP+ SF+ + H R S R S GF P R +
Sbjct: 2 ISVRAVNSCSIFRSS--PPVSSFRCRLNS-HLRTTTSSSHHDRYSKSGFGFPVFRFDLPI 58
Query: 57 LNRSGSQSCSVHSLVDSVMQELVAIRKRLR--VFAKVKVSSG-ELLEDKLENQVLQKGLL 113
L +S S+ S VD+V++EL + RKR R + + +K+++G E L+DKL NQ ++KGLL
Sbjct: 59 LGHGDVRSYSLQSFVDTVLEELASYRKRKRQGICSAIKLTTGGEALDDKLVNQAVEKGLL 118
Query: 114 LEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
+EFKKDS+RVLLAV QR DGKKNWMVYDQ
Sbjct: 119 VEFKKDSERVLLAVVQRRDGKKNWMVYDQ 147
>gi|449448900|ref|XP_004142203.1| PREDICTED: ribonuclease II, chloroplastic/mitochondrial-like
[Cucumis sativus]
Length = 809
Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 70/147 (47%), Positives = 90/147 (61%), Gaps = 19/147 (12%)
Query: 1 MAVRAVNSCSMFRSAACPPLVSFKIQCCYYHFRSLQLRRKSNLGFRLPACRSERQFLNRS 60
MA R VN+ S+FRS+ PPL +F R S L F P R Q
Sbjct: 27 MAFRTVNTFSVFRSSLSPPLSAF--------------RWSSKLRFSSPLLRHRYQIFKTG 72
Query: 61 GSQSCSVHSLVDSVMQELVAIRKRLRVFAKVKVS-----SGELLEDKLENQVLQKGLLLE 115
G + S +S+ +++++EL A R+R RV A K+ SGE+ EDKL N+ L +GLLLE
Sbjct: 73 GGRLYSFYSVFENIIEELEAPRRRKRVSATAKMGLVGMGSGEVTEDKLVNRTLDRGLLLE 132
Query: 116 FKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
FKKDS+RVLLAVAQ+PDGKKNWMV+DQ
Sbjct: 133 FKKDSERVLLAVAQKPDGKKNWMVFDQ 159
>gi|449520221|ref|XP_004167132.1| PREDICTED: LOW QUALITY PROTEIN: ribonuclease II,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 809
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 69/147 (46%), Positives = 89/147 (60%), Gaps = 19/147 (12%)
Query: 1 MAVRAVNSCSMFRSAACPPLVSFKIQCCYYHFRSLQLRRKSNLGFRLPACRSERQFLNRS 60
MA R VN+ S+FRS+ PPL +F R S L F P R Q
Sbjct: 27 MAFRTVNTFSVFRSSLSPPLSAF--------------RWSSKLRFSSPLLRHRYQIFKTG 72
Query: 61 GSQSCSVHSLVDSVMQELVAIRKRLRVFAKVKVS-----SGELLEDKLENQVLQKGLLLE 115
G + S +S+ +++++EL A R+R RV A K+ SGE+ EDKL N+ L +GLLLE
Sbjct: 73 GGRLYSFYSVFENIIEELEAPRRRKRVSATAKMGLVGMGSGEVTEDKLVNRTLDRGLLLE 132
Query: 116 FKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
FKKDS+RVLLAVAQ+PDG KNWMV+DQ
Sbjct: 133 FKKDSERVLLAVAQKPDGXKNWMVFDQ 159
>gi|356566110|ref|XP_003551278.1| PREDICTED: uncharacterized ribonuclease sll1290-like [Glycine max]
Length = 783
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 92/148 (62%), Gaps = 23/148 (15%)
Query: 1 MAVRAVNSCSMFRSAACPPLVSFKIQCCYYHFRSLQLRRKSNLGFRLPACRSERQFLNRS 60
MAVRAV SCS+FR ++ PPL S ++ ++ +RS R +L R A
Sbjct: 2 MAVRAVTSCSLFRPSS-PPLFSSALR--FFPYRS---RGPPSLSLRYGAH---------- 45
Query: 61 GSQSCSVHSLVDSVMQELVAIRKRLRVFAKVKVSS------GELLEDKLENQVLQKGLLL 114
+Q+ SV SL +S+M+EL A RKR + S+ EL ED+L N LQKGLLL
Sbjct: 46 -TQTRSVQSLFNSLMEELRAARKRRQKRVSAAASNRMGLLNEELAEDRLVNHSLQKGLLL 104
Query: 115 EFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
EFKKDSDRVLLAVAQRPDGKKNWMV DQ
Sbjct: 105 EFKKDSDRVLLAVAQRPDGKKNWMVSDQ 132
>gi|297740364|emb|CBI30546.3| unnamed protein product [Vitis vinifera]
Length = 720
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/71 (73%), Positives = 62/71 (87%), Gaps = 3/71 (4%)
Query: 75 MQELVAIRKRLRVFAKVKV---SSGELLEDKLENQVLQKGLLLEFKKDSDRVLLAVAQRP 131
M+EL A RKR R++A K+ SSG+LLEDKL+NQVLQKGLLLEF+KDS+RVLLAVAQ+
Sbjct: 1 MEELHASRKRKRIYASTKMGLTSSGQLLEDKLKNQVLQKGLLLEFRKDSERVLLAVAQKA 60
Query: 132 DGKKNWMVYDQ 142
DGKKNWMV+DQ
Sbjct: 61 DGKKNWMVFDQ 71
>gi|242059199|ref|XP_002458745.1| hypothetical protein SORBIDRAFT_03g039500 [Sorghum bicolor]
gi|241930720|gb|EES03865.1| hypothetical protein SORBIDRAFT_03g039500 [Sorghum bicolor]
Length = 782
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 64/85 (75%), Gaps = 2/85 (2%)
Query: 59 RSGSQSCSVHSLVDSVMQELVAIRKRLRVFAKVKV-SSGELLEDKLENQVLQKGLLLEFK 117
G +S HS+VDSV+ EL R+R+RV AK+ + + EL ++K++ + LQKGLLLEF+
Sbjct: 46 HGGCRSRLAHSIVDSVLDEL-RYRRRVRVSAKIGLQGTKELPDNKIDKRTLQKGLLLEFQ 104
Query: 118 KDSDRVLLAVAQRPDGKKNWMVYDQ 142
KDS+R LLAV +RPDGKKNWMV DQ
Sbjct: 105 KDSERSLLAVVERPDGKKNWMVTDQ 129
>gi|218189347|gb|EEC71774.1| hypothetical protein OsI_04386 [Oryza sativa Indica Group]
gi|222619521|gb|EEE55653.1| hypothetical protein OsJ_04037 [Oryza sativa Japonica Group]
Length = 774
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 68/98 (69%), Gaps = 2/98 (2%)
Query: 46 RLPACRSERQFLNRSGSQSCSVHSLVDSVMQELVAIRKRLRVFAKVKV-SSGELLEDKLE 104
R + R+ F G + VH LVDSV++EL + ++R RV AK+ + + EL ++K++
Sbjct: 30 RPDSARAGWHFSLYGGCRGRQVHGLVDSVLEELRS-QRRGRVSAKIGLQGTKELSDNKID 88
Query: 105 NQVLQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
+ LQKGLLLEF+KDS+R LLAV +RPDGKKNW V DQ
Sbjct: 89 KRTLQKGLLLEFQKDSERFLLAVVERPDGKKNWKVTDQ 126
>gi|297597941|ref|NP_001044770.2| Os01g0841800 [Oryza sativa Japonica Group]
gi|255673863|dbj|BAF06684.2| Os01g0841800 [Oryza sativa Japonica Group]
Length = 548
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 68/98 (69%), Gaps = 2/98 (2%)
Query: 46 RLPACRSERQFLNRSGSQSCSVHSLVDSVMQELVAIRKRLRVFAKVKV-SSGELLEDKLE 104
R + R+ F G + VH LVDSV++EL + ++R RV AK+ + + EL ++K++
Sbjct: 35 RPDSARAGWHFSLYGGCRGRQVHGLVDSVLEELRS-QRRGRVSAKIGLQGTKELSDNKID 93
Query: 105 NQVLQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
+ LQKGLLLEF+KDS+R LLAV +RPDGKKNW V DQ
Sbjct: 94 KRTLQKGLLLEFQKDSERFLLAVVERPDGKKNWKVTDQ 131
>gi|56784235|dbj|BAD81730.1| ribonuclease II-like protein [Oryza sativa Japonica Group]
Length = 543
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 68/98 (69%), Gaps = 2/98 (2%)
Query: 46 RLPACRSERQFLNRSGSQSCSVHSLVDSVMQELVAIRKRLRVFAKVKV-SSGELLEDKLE 104
R + R+ F G + VH LVDSV++EL + ++R RV AK+ + + EL ++K++
Sbjct: 30 RPDSARAGWHFSLYGGCRGRQVHGLVDSVLEELRS-QRRGRVSAKIGLQGTKELSDNKID 88
Query: 105 NQVLQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
+ LQKGLLLEF+KDS+R LLAV +RPDGKKNW V DQ
Sbjct: 89 KRTLQKGLLLEFQKDSERFLLAVVERPDGKKNWKVTDQ 126
>gi|414879754|tpg|DAA56885.1| TPA: hypothetical protein ZEAMMB73_060871 [Zea mays]
Length = 783
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 60/85 (70%), Gaps = 2/85 (2%)
Query: 59 RSGSQSCSVHSLVDSVMQELVAIRKRLRVFAKVKV-SSGELLEDKLENQVLQKGLLLEFK 117
R G +S HS+VD VM+EL + R+ AK+ + + EL ++K+ + LQKGLLLEF+
Sbjct: 47 RGGCRSRLAHSIVDLVMEELRSRRRVRVS-AKIGLQGTKELPDNKIVKRTLQKGLLLEFQ 105
Query: 118 KDSDRVLLAVAQRPDGKKNWMVYDQ 142
KD +R LLAV +RPDGKKNWMV DQ
Sbjct: 106 KDPERSLLAVVERPDGKKNWMVTDQ 130
>gi|414879755|tpg|DAA56886.1| TPA: hypothetical protein ZEAMMB73_060871 [Zea mays]
Length = 543
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 60/85 (70%), Gaps = 2/85 (2%)
Query: 59 RSGSQSCSVHSLVDSVMQELVAIRKRLRVFAKVKV-SSGELLEDKLENQVLQKGLLLEFK 117
R G +S HS+VD VM+EL + R+ AK+ + + EL ++K+ + LQKGLLLEF+
Sbjct: 47 RGGCRSRLAHSIVDLVMEELRSRRRVRVS-AKIGLQGTKELPDNKIVKRTLQKGLLLEFQ 105
Query: 118 KDSDRVLLAVAQRPDGKKNWMVYDQ 142
KD +R LLAV +RPDGKKNWMV DQ
Sbjct: 106 KDPERSLLAVVERPDGKKNWMVTDQ 130
>gi|414879756|tpg|DAA56887.1| TPA: hypothetical protein ZEAMMB73_060871 [Zea mays]
Length = 363
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 60/85 (70%), Gaps = 2/85 (2%)
Query: 59 RSGSQSCSVHSLVDSVMQELVAIRKRLRVFAKVKV-SSGELLEDKLENQVLQKGLLLEFK 117
R G +S HS+VD VM+EL + R+ AK+ + + EL ++K+ + LQKGLLLEF+
Sbjct: 47 RGGCRSRLAHSIVDLVMEELRSRRRVRVS-AKIGLQGTKELPDNKIVKRTLQKGLLLEFQ 105
Query: 118 KDSDRVLLAVAQRPDGKKNWMVYDQ 142
KD +R LLAV +RPDGKKNWMV DQ
Sbjct: 106 KDPERSLLAVVERPDGKKNWMVTDQ 130
>gi|357134851|ref|XP_003569029.1| PREDICTED: uncharacterized ribonuclease sll1290-like [Brachypodium
distachyon]
Length = 783
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 70 LVDSVMQELVAIRKRLRVFAKVKVSSGELLED-KLENQVLQKGLLLEFKKDSDRVLLAVA 128
LVDSV++EL + R+ R A++ + + L D K++ + LQKG LLEF KDS+R LLAV
Sbjct: 60 LVDSVLEELRSSRRAARFSARIGLHGTKQLSDIKIDKRTLQKGWLLEFHKDSERSLLAVV 119
Query: 129 QRPDGKKNWMVYDQ 142
+RPDGKKNW+V DQ
Sbjct: 120 ERPDGKKNWVVTDQ 133
>gi|326509537|dbj|BAJ91685.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 319
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 77/142 (54%), Gaps = 24/142 (16%)
Query: 1 MAVRAVNSCSMFRSAACPPLVSFKIQCCYYHFRSLQLRRKSNLGFRLPACRSERQFLNRS 60
MA RA + CS SAA ++F FR L R + L PA RS
Sbjct: 6 MAARAASGCS---SAA----LAF--------FRLRPLGRAARLA---PAGRSA------F 41
Query: 61 GSQSCSVHSLVDSVMQELVAIRKRLRVFAKVKVSSGELLEDKLENQVLQKGLLLEFKKDS 120
G+ + LVDSV+QEL + R+ + EL + K+E + +QKGLLLEF KDS
Sbjct: 42 GATAACRGRLVDSVLQELRSRRRVRVSARIGLQGTKELSDSKIEKKPIQKGLLLEFHKDS 101
Query: 121 DRVLLAVAQRPDGKKNWMVYDQ 142
+R LLAV +RPDGKKNW+V DQ
Sbjct: 102 ERSLLAVVERPDGKKNWVVTDQ 123
>gi|168012160|ref|XP_001758770.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689907|gb|EDQ76276.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 717
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 38/60 (63%)
Query: 89 AKVKVSSGELLEDKLENQVLQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQVLVETP 148
AK + + + K L+KG+LLEF K+S + +LAV QRP+GKKNW+ DQ ++ P
Sbjct: 13 AKAAIVNETTTDVKHSEGTLRKGVLLEFSKESGKYVLAVIQRPEGKKNWVAADQASLKLP 72
>gi|428211654|ref|YP_007084798.1| exoribonuclease R [Oscillatoria acuminata PCC 6304]
gi|428000035|gb|AFY80878.1| exoribonuclease R [Oscillatoria acuminata PCC 6304]
Length = 671
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 21/35 (60%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG LLE++ + DR LAVA RPDGKKNW+V D+
Sbjct: 1 MEKGTLLEYRLNGDR-RLAVADRPDGKKNWVVVDE 34
>gi|428317148|ref|YP_007115030.1| Exoribonuclease II [Oscillatoria nigro-viridis PCC 7112]
gi|428240828|gb|AFZ06614.1| Exoribonuclease II [Oscillatoria nigro-viridis PCC 7112]
Length = 668
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 21/35 (60%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ DR LAVA RPDGKKNW+V D+
Sbjct: 1 MEKGTLVEFRVHGDR-RLAVADRPDGKKNWVVVDE 34
>gi|334116976|ref|ZP_08491068.1| Exoribonuclease II [Microcoleus vaginatus FGP-2]
gi|333461796|gb|EGK90401.1| Exoribonuclease II [Microcoleus vaginatus FGP-2]
Length = 668
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 21/35 (60%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ DR LAVA RPDGKKNW+V D+
Sbjct: 1 MEKGTLVEFRVHGDR-RLAVADRPDGKKNWVVVDE 34
>gi|428775398|ref|YP_007167185.1| exoribonuclease II [Halothece sp. PCC 7418]
gi|428689677|gb|AFZ42971.1| Exoribonuclease II [Halothece sp. PCC 7418]
Length = 667
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EFK +R LAVA+RP+GKK+W+V DQ
Sbjct: 1 MEKGTLIEFKAQGER-RLAVAERPEGKKHWIVLDQ 34
>gi|428227000|ref|YP_007111097.1| exoribonuclease II [Geitlerinema sp. PCC 7407]
gi|427986901|gb|AFY68045.1| Exoribonuclease II [Geitlerinema sp. PCC 7407]
Length = 675
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
+QKG L+EF+ DR LAVA+RP+GKK+W+V D+
Sbjct: 1 MQKGTLIEFRLHGDR-RLAVAERPEGKKHWIVIDE 34
>gi|428779631|ref|YP_007171417.1| exoribonuclease R [Dactylococcopsis salina PCC 8305]
gi|428693910|gb|AFZ50060.1| exoribonuclease R [Dactylococcopsis salina PCC 8305]
Length = 667
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EFK +R LAVA+RP+GKK+W+V DQ
Sbjct: 1 MEKGTLIEFKAQGER-RLAVAERPEGKKHWIVLDQ 34
>gi|300869627|ref|ZP_07114207.1| exoribonuclease II [Oscillatoria sp. PCC 6506]
gi|300332405|emb|CBN59407.1| exoribonuclease II [Oscillatoria sp. PCC 6506]
Length = 670
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ +R LAVA RPDGKKNW+V D+
Sbjct: 1 MEKGTLIEFRLHGER-RLAVADRPDGKKNWVVVDE 34
>gi|307150006|ref|YP_003885390.1| exoribonuclease II [Cyanothece sp. PCC 7822]
gi|306980234|gb|ADN12115.1| Exoribonuclease II [Cyanothece sp. PCC 7822]
Length = 676
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 103 LENQVLQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
+E L KG L+EF+ +R LAV RPDGKK+W+V DQ
Sbjct: 1 MEKGTLSKGKLVEFRLQGER-RLAVVDRPDGKKDWIVIDQ 39
>gi|170077199|ref|YP_001733837.1| ribonuclease II [Synechococcus sp. PCC 7002]
gi|169884868|gb|ACA98581.1| ribonuclease II [Synechococcus sp. PCC 7002]
Length = 670
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYD 141
++KG L+EF+ +RVL AVA+RP+GKK+W+V D
Sbjct: 1 MEKGQLIEFRLQGERVL-AVAERPEGKKDWIVID 33
>gi|16329795|ref|NP_440523.1| ribonuclease II [Synechocystis sp. PCC 6803]
gi|383321537|ref|YP_005382390.1| ribonuclease II [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383324707|ref|YP_005385560.1| ribonuclease II [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383490591|ref|YP_005408267.1| ribonuclease II [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384435857|ref|YP_005650581.1| ribonuclease II [Synechocystis sp. PCC 6803]
gi|451813955|ref|YP_007450407.1| ribonuclease II [Synechocystis sp. PCC 6803]
gi|7674330|sp|P73177.1|RN2H_SYNY3 RecName: Full=Uncharacterized ribonuclease sll1290
gi|1652280|dbj|BAA17203.1| ribonuclease II [Synechocystis sp. PCC 6803]
gi|339272889|dbj|BAK49376.1| ribonuclease II [Synechocystis sp. PCC 6803]
gi|359270856|dbj|BAL28375.1| ribonuclease II [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359274027|dbj|BAL31545.1| ribonuclease II [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359277197|dbj|BAL34714.1| ribonuclease II [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|451779924|gb|AGF50893.1| ribonuclease II [Synechocystis sp. PCC 6803]
Length = 666
Score = 43.1 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ +R LAV RPDGKK+W+V DQ
Sbjct: 1 MEKGQLIEFRHQGER-RLAVVDRPDGKKDWVVIDQ 34
>gi|187438624|gb|ABO20871.2| chloroplast ribonuclease [Chlamydomonas reinhardtii]
Length = 1083
Score = 42.7 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
LQ G L+EF+K+ DR +L + PDGKKNW V DQ
Sbjct: 306 LQAGCLVEFEKN-DRGVLGLVTGPDGKKNWFVVDQ 339
>gi|218438216|ref|YP_002376545.1| exoribonuclease II [Cyanothece sp. PCC 7424]
gi|218170944|gb|ACK69677.1| Exoribonuclease II [Cyanothece sp. PCC 7424]
Length = 676
Score = 42.7 bits (99), Expect = 0.057, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 103 LENQVLQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
+E L KG L+EF+ DR LAV RP+GKK+W+V D+
Sbjct: 1 MEKGTLSKGKLIEFRLQGDR-RLAVVDRPEGKKDWIVIDE 39
>gi|434399751|ref|YP_007133755.1| Exoribonuclease II [Stanieria cyanosphaera PCC 7437]
gi|428270848|gb|AFZ36789.1| Exoribonuclease II [Stanieria cyanosphaera PCC 7437]
Length = 671
Score = 42.4 bits (98), Expect = 0.068, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ +R LAVA+RP+GKK+W+V D+
Sbjct: 1 MEKGTLIEFRIQGER-RLAVAERPEGKKDWIVIDE 34
>gi|427723549|ref|YP_007070826.1| exoribonuclease II [Leptolyngbya sp. PCC 7376]
gi|427355269|gb|AFY37992.1| Exoribonuclease II [Leptolyngbya sp. PCC 7376]
Length = 670
Score = 42.4 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYD 141
+++G L+EF+ +R LLAVA+RP+GKK+W+V D
Sbjct: 1 MEQGQLIEFRLQGER-LLAVAERPEGKKDWIVVD 33
>gi|302832602|ref|XP_002947865.1| hypothetical protein VOLCADRAFT_103637 [Volvox carteri f.
nagariensis]
gi|300266667|gb|EFJ50853.1| hypothetical protein VOLCADRAFT_103637 [Volvox carteri f.
nagariensis]
Length = 1028
Score = 42.0 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQVLVETP 148
LQ G L+E++K+ DR +LAV PDGKKNW DQ P
Sbjct: 184 LQVGALVEYEKN-DRAVLAVLVAPDGKKNWFAVDQTGRRQP 223
>gi|443328119|ref|ZP_21056722.1| exoribonuclease R [Xenococcus sp. PCC 7305]
gi|442792316|gb|ELS01800.1| exoribonuclease R [Xenococcus sp. PCC 7305]
Length = 669
Score = 42.0 bits (97), Expect = 0.095, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 27/34 (79%), Gaps = 1/34 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYD 141
++KG L+EF+ +R LAVA+RP+GKK+W+V D
Sbjct: 1 MEKGTLIEFRLQGER-RLAVAERPEGKKDWIVVD 33
>gi|220906337|ref|YP_002481648.1| exoribonuclease II [Cyanothece sp. PCC 7425]
gi|219862948|gb|ACL43287.1| Exoribonuclease II [Cyanothece sp. PCC 7425]
Length = 671
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ R LAVA+RP+GKK+W+V DQ
Sbjct: 1 MEKGTLVEFRLQGQR-RLAVAERPEGKKHWIVVDQ 34
>gi|159465501|ref|XP_001690961.1| 3'-5' exoribonuclease II [Chlamydomonas reinhardtii]
gi|158279647|gb|EDP05407.1| 3'-5' exoribonuclease II [Chlamydomonas reinhardtii]
Length = 699
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQVLVETP 148
LQ G L+EF+K+ DR +L + PDGKKNW V QV + P
Sbjct: 159 LQAGCLVEFEKN-DRGVLGLVTGPDGKKNWFVPKQVSLLLP 198
>gi|113477198|ref|YP_723259.1| exoribonuclease II [Trichodesmium erythraeum IMS101]
gi|110168246|gb|ABG52786.1| Exoribonuclease II [Trichodesmium erythraeum IMS101]
Length = 674
Score = 41.6 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYD 141
++KG L+EF+ +R LAVA RPDGKKNW+V +
Sbjct: 1 MEKGKLIEFRLHGER-RLAVADRPDGKKNWVVIE 33
>gi|254423969|ref|ZP_05037687.1| RNB-like protein [Synechococcus sp. PCC 7335]
gi|196191458|gb|EDX86422.1| RNB-like protein [Synechococcus sp. PCC 7335]
Length = 681
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EFK LAVA RP+GKKNW++ DQ
Sbjct: 1 MEKGTLIEFKLKGSP-YLAVADRPEGKKNWVLVDQ 34
>gi|428310624|ref|YP_007121601.1| exoribonuclease R [Microcoleus sp. PCC 7113]
gi|428252236|gb|AFZ18195.1| exoribonuclease R [Microcoleus sp. PCC 7113]
Length = 671
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ DR LA A RP+GKK+W+V D+
Sbjct: 1 MEKGTLIEFRLGGDR-RLATADRPEGKKHWIVVDE 34
>gi|428204483|ref|YP_007083072.1| exoribonuclease R [Pleurocapsa sp. PCC 7327]
gi|427981915|gb|AFY79515.1| exoribonuclease R [Pleurocapsa sp. PCC 7327]
Length = 666
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF++ +R LAV RP+GKK+W+V D+
Sbjct: 1 MEKGKLIEFRRQGER-RLAVTDRPEGKKDWIVLDE 34
>gi|443323592|ref|ZP_21052597.1| exoribonuclease R [Gloeocapsa sp. PCC 73106]
gi|442786772|gb|ELR96500.1| exoribonuclease R [Gloeocapsa sp. PCC 73106]
Length = 667
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ R LAV RP+GKK+W+V DQ
Sbjct: 1 MEKGTLIEFRLQGHR-RLAVVDRPEGKKDWIVIDQ 34
>gi|443310614|ref|ZP_21040260.1| exoribonuclease R [Synechocystis sp. PCC 7509]
gi|442779319|gb|ELR89566.1| exoribonuclease R [Synechocystis sp. PCC 7509]
Length = 679
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
+ KG L+EFK DR LAV RPDGK W V D+
Sbjct: 1 MDKGTLVEFKVQGDR-RLAVVDRPDGKTRWFVVDE 34
>gi|427729568|ref|YP_007075805.1| exoribonuclease R [Nostoc sp. PCC 7524]
gi|427365487|gb|AFY48208.1| exoribonuclease R [Nostoc sp. PCC 7524]
Length = 710
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 106 QVLQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
+V++KG L+EF+ DR L V RPDGK W V D+
Sbjct: 23 RVVEKGTLVEFRVQGDR-RLGVVDRPDGKTRWFVIDE 58
>gi|427733634|ref|YP_007053178.1| exoribonuclease R [Rivularia sp. PCC 7116]
gi|427368675|gb|AFY52631.1| exoribonuclease R [Rivularia sp. PCC 7116]
Length = 681
Score = 39.3 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ +R L V +RPDGK W+V D+
Sbjct: 1 MEKGTLVEFRNQGER-RLGVVERPDGKNRWIVLDE 34
>gi|428296785|ref|YP_007135091.1| exoribonuclease II [Calothrix sp. PCC 6303]
gi|428233329|gb|AFY99118.1| Exoribonuclease II [Calothrix sp. PCC 6303]
Length = 685
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ SDR L + RPDGK W V D+
Sbjct: 1 MEKGTLVEFRVGSDR-RLGIVDRPDGKTRWFVIDE 34
>gi|359463693|ref|ZP_09252256.1| ribonuclease II [Acaryochloris sp. CCMEE 5410]
Length = 680
Score = 38.9 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 6/41 (14%)
Query: 108 LQKGLLLEFKKDSD------RVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EFK+ D L V RP+GKKNW+V DQ
Sbjct: 1 MEKGTLIEFKRRGDCAEGQRPFQLGVLDRPEGKKNWVVVDQ 41
>gi|284929340|ref|YP_003421862.1| exoribonuclease R [cyanobacterium UCYN-A]
gi|284809784|gb|ADB95481.1| exoribonuclease R [cyanobacterium UCYN-A]
Length = 671
Score = 38.9 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYD 141
++KG L+EF+ + +R LAV RP+GKK+W+V D
Sbjct: 1 MEKGKLIEFRINGER-RLAVVDRPEGKKDWIVID 33
>gi|186685031|ref|YP_001868227.1| ribonuclease II [Nostoc punctiforme PCC 73102]
gi|186467483|gb|ACC83284.1| ribonuclease II [Nostoc punctiforme PCC 73102]
Length = 686
Score = 38.9 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ DR L + +RPDGK W V D+
Sbjct: 1 MEKGTLVEFRVQGDR-RLGIVERPDGKTRWFVVDE 34
>gi|158337924|ref|YP_001519100.1| exoribonuclease II [Acaryochloris marina MBIC11017]
gi|158308165|gb|ABW29782.1| exoribonuclease II [Acaryochloris marina MBIC11017]
Length = 680
Score = 38.9 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 6/41 (14%)
Query: 108 LQKGLLLEFKKDSD------RVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EFK+ D L V RP+GKKNW+V DQ
Sbjct: 1 MEKGTLIEFKRRGDCAEGQRPFQLGVLDRPEGKKNWVVVDQ 41
>gi|428769100|ref|YP_007160890.1| exoribonuclease II [Cyanobacterium aponinum PCC 10605]
gi|428683379|gb|AFZ52846.1| Exoribonuclease II [Cyanobacterium aponinum PCC 10605]
Length = 668
Score = 38.9 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EFK + DR L V ++P+GKK+W+ D+
Sbjct: 1 MEKGTLVEFKVNGDR-RLGVIEKPEGKKDWIAIDE 34
>gi|119488090|ref|ZP_01621534.1| Ribonuclease II [Lyngbya sp. PCC 8106]
gi|119455379|gb|EAW36518.1| Ribonuclease II [Lyngbya sp. PCC 8106]
Length = 672
Score = 38.9 bits (89), Expect = 0.79, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYD 141
++KG L+EF+ +R L VA RP+GKK+W+V D
Sbjct: 1 MEKGTLIEFRVHGER-RLGVADRPEGKKHWIVID 33
>gi|254417643|ref|ZP_05031377.1| RNB-like protein [Coleofasciculus chthonoplastes PCC 7420]
gi|196175561|gb|EDX70591.1| RNB-like protein [Coleofasciculus chthonoplastes PCC 7420]
Length = 671
Score = 38.9 bits (89), Expect = 0.81, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ DR LA+ RPDGK W V D+
Sbjct: 1 MEKGTLIEFRVQGDR-HLAIVDRPDGKTRWTVIDE 34
>gi|425443645|ref|ZP_18823717.1| putative enzyme [Microcystis aeruginosa PCC 9443]
gi|389734195|emb|CCI02125.1| putative enzyme [Microcystis aeruginosa PCC 9443]
Length = 671
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ +R L V RP+GKK+W+V DQ
Sbjct: 1 MEKGTLVEFRVQGER-RLGVIDRPEGKKDWIVIDQ 34
>gi|425458520|ref|ZP_18838008.1| putative enzyme [Microcystis aeruginosa PCC 9808]
gi|389827397|emb|CCI21362.1| putative enzyme [Microcystis aeruginosa PCC 9808]
Length = 671
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ +R L V RP+GKK+W+V DQ
Sbjct: 1 MEKGTLVEFRVQGER-RLGVIDRPEGKKDWIVIDQ 34
>gi|422304064|ref|ZP_16391413.1| putative enzyme [Microcystis aeruginosa PCC 9806]
gi|389790907|emb|CCI13274.1| putative enzyme [Microcystis aeruginosa PCC 9806]
Length = 671
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ +R L V RP+GKK+W+V DQ
Sbjct: 1 MEKGTLVEFRVQGER-RLGVIDRPEGKKDWIVIDQ 34
>gi|434407914|ref|YP_007150799.1| exoribonuclease R [Cylindrospermum stagnale PCC 7417]
gi|428262169|gb|AFZ28119.1| exoribonuclease R [Cylindrospermum stagnale PCC 7417]
Length = 686
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ DR L V RPDGK W V D+
Sbjct: 1 MEKGTLVEFRVQGDR-RLGVVDRPDGKTRWFVVDE 34
>gi|159030380|emb|CAO91275.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 671
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ +R L V RP+GKK+W+V DQ
Sbjct: 1 MEKGTLVEFRVQGER-RLGVIDRPEGKKDWIVIDQ 34
>gi|17231942|ref|NP_488490.1| ribonuclease II [Nostoc sp. PCC 7120]
gi|17133586|dbj|BAB76149.1| ribonuclease II [Nostoc sp. PCC 7120]
Length = 686
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ DR L V RPDGK W V D+
Sbjct: 1 MEKGTLVEFRVQGDR-RLGVVDRPDGKTRWFVVDE 34
>gi|427418757|ref|ZP_18908940.1| exoribonuclease R [Leptolyngbya sp. PCC 7375]
gi|425761470|gb|EKV02323.1| exoribonuclease R [Leptolyngbya sp. PCC 7375]
Length = 686
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYD 141
++KG L+EFK + L VA RP+GKKNW+V D
Sbjct: 1 MEKGALIEFKVQGNP-RLGVADRPEGKKNWVVID 33
>gi|440755588|ref|ZP_20934790.1| RNB domain protein [Microcystis aeruginosa TAIHU98]
gi|440175794|gb|ELP55163.1| RNB domain protein [Microcystis aeruginosa TAIHU98]
Length = 671
Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ +R L V RP+GKK+W+V DQ
Sbjct: 1 MEKGTLVEFRVQGER-RLGVIDRPEGKKDWIVIDQ 34
>gi|425471402|ref|ZP_18850262.1| putative enzyme [Microcystis aeruginosa PCC 9701]
gi|389882731|emb|CCI36838.1| putative enzyme [Microcystis aeruginosa PCC 9701]
Length = 671
Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ +R L V RP+GKK+W+V DQ
Sbjct: 1 MEKGTLVEFRVQGER-RLGVIDRPEGKKDWIVIDQ 34
>gi|425452115|ref|ZP_18831933.1| putative enzyme [Microcystis aeruginosa PCC 7941]
gi|389766224|emb|CCI08082.1| putative enzyme [Microcystis aeruginosa PCC 7941]
Length = 671
Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ +R L V RP+GKK+W+V DQ
Sbjct: 1 MEKGTLVEFRVQGER-RLGVIDRPEGKKDWIVIDQ 34
>gi|425441239|ref|ZP_18821520.1| putative enzyme [Microcystis aeruginosa PCC 9717]
gi|389718110|emb|CCH97886.1| putative enzyme [Microcystis aeruginosa PCC 9717]
Length = 671
Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ +R L V RP+GKK+W+V DQ
Sbjct: 1 MEKGTLVEFRVQGER-RLGVIDRPEGKKDWIVIDQ 34
>gi|425435093|ref|ZP_18815553.1| putative enzyme [Microcystis aeruginosa PCC 9432]
gi|389675171|emb|CCH95667.1| putative enzyme [Microcystis aeruginosa PCC 9432]
Length = 671
Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ +R L V RP+GKK+W+V DQ
Sbjct: 1 MEKGTLVEFRVQGER-RLGVIDRPEGKKDWIVIDQ 34
>gi|166367429|ref|YP_001659702.1| ribonuclease II [Microcystis aeruginosa NIES-843]
gi|166089802|dbj|BAG04510.1| ribonuclease II [Microcystis aeruginosa NIES-843]
Length = 671
Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ +R L V RP+GKK+W+V DQ
Sbjct: 1 MEKGTLVEFRVQGER-RLGVIDRPEGKKDWIVIDQ 34
>gi|75907545|ref|YP_321841.1| ribonuclease II [Anabaena variabilis ATCC 29413]
gi|75701270|gb|ABA20946.1| Ribonuclease II [Anabaena variabilis ATCC 29413]
Length = 686
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ DR L V RPDGK W V D+
Sbjct: 1 MEKGTLVEFRVQGDR-RLGVVDRPDGKTRWFVVDE 34
>gi|298493171|ref|YP_003723348.1| exoribonuclease II ['Nostoc azollae' 0708]
gi|298235089|gb|ADI66225.1| Exoribonuclease II ['Nostoc azollae' 0708]
Length = 683
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ DR L V RPDGK W V D+
Sbjct: 1 MEKGTLVEFRVQGDR-RLGVVDRPDGKTRWFVVDE 34
>gi|427705694|ref|YP_007048071.1| exoribonuclease II [Nostoc sp. PCC 7107]
gi|427358199|gb|AFY40921.1| Exoribonuclease II [Nostoc sp. PCC 7107]
Length = 686
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ DR L V RPDGK W V D+
Sbjct: 1 MEKGTLVEFRVQGDR-RLGVVDRPDGKTRWFVVDE 34
>gi|390439312|ref|ZP_10227718.1| putative enzyme [Microcystis sp. T1-4]
gi|389837295|emb|CCI31842.1| putative enzyme [Microcystis sp. T1-4]
Length = 671
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ +R L V RP+GKK+W+V DQ
Sbjct: 1 MEKGTLVEFRVQGER-RLGVIDRPEGKKDWIVIDQ 34
>gi|67924092|ref|ZP_00517539.1| Exoribonuclease II [Crocosphaera watsonii WH 8501]
gi|416401710|ref|ZP_11687276.1| ribonuclease II [Crocosphaera watsonii WH 0003]
gi|67854053|gb|EAM49365.1| Exoribonuclease II [Crocosphaera watsonii WH 8501]
gi|357262011|gb|EHJ11211.1| ribonuclease II [Crocosphaera watsonii WH 0003]
Length = 670
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYD 141
++KG L+EF+ + + LAV RP+GKK+WMV D
Sbjct: 1 MEKGKLIEFRLNGE-YRLAVVDRPEGKKDWMVID 33
>gi|425455257|ref|ZP_18834977.1| putative enzyme [Microcystis aeruginosa PCC 9807]
gi|389803880|emb|CCI17236.1| putative enzyme [Microcystis aeruginosa PCC 9807]
Length = 672
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ +R L V RP+GKK+W+V DQ
Sbjct: 1 MEKGTLVEFRVQGER-HLGVIDRPEGKKDWIVIDQ 34
>gi|209528143|ref|ZP_03276617.1| Exoribonuclease II [Arthrospira maxima CS-328]
gi|376007620|ref|ZP_09784813.1| Exoribonuclease II [Arthrospira sp. PCC 8005]
gi|423063139|ref|ZP_17051929.1| ribonuclease II [Arthrospira platensis C1]
gi|209491431|gb|EDZ91812.1| Exoribonuclease II [Arthrospira maxima CS-328]
gi|375324020|emb|CCE20566.1| Exoribonuclease II [Arthrospira sp. PCC 8005]
gi|406715261|gb|EKD10417.1| ribonuclease II [Arthrospira platensis C1]
Length = 672
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYD 141
++KG L+EF+ +R LAV RP+GKK+W++ D
Sbjct: 1 MEKGTLVEFRHHGER-RLAVVDRPEGKKHWILVD 33
>gi|354564734|ref|ZP_08983910.1| Exoribonuclease II [Fischerella sp. JSC-11]
gi|353549860|gb|EHC19299.1| Exoribonuclease II [Fischerella sp. JSC-11]
Length = 681
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ DR L V RPDGK W V D+
Sbjct: 1 MEKGTLVEFRLQGDR-RLGVVDRPDGKTRWFVVDE 34
>gi|282901218|ref|ZP_06309147.1| Ribonuclease II [Cylindrospermopsis raciborskii CS-505]
gi|281193918|gb|EFA68886.1| Ribonuclease II [Cylindrospermopsis raciborskii CS-505]
Length = 684
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ DR L V RPDGK W V D+
Sbjct: 1 MEKGTLVEFRVQGDR-RLGVVDRPDGKTRWFVVDE 34
>gi|282895501|ref|ZP_06303638.1| Ribonuclease II [Raphidiopsis brookii D9]
gi|281199534|gb|EFA74397.1| Ribonuclease II [Raphidiopsis brookii D9]
Length = 683
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ DR L V RPDGK W V D+
Sbjct: 1 MEKGTLVEFRVQGDR-RLGVVDRPDGKTRWFVVDE 34
>gi|427711712|ref|YP_007060336.1| exoribonuclease R [Synechococcus sp. PCC 6312]
gi|427375841|gb|AFY59793.1| exoribonuclease R [Synechococcus sp. PCC 6312]
Length = 670
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYD 141
++KG L+EF+ ++ R L V +RP+GKK+W+V D
Sbjct: 1 MEKGTLVEFRVNNQR-RLGVVERPEGKKHWIVID 33
>gi|411119545|ref|ZP_11391925.1| exoribonuclease R [Oscillatoriales cyanobacterium JSC-12]
gi|410711408|gb|EKQ68915.1| exoribonuclease R [Oscillatoriales cyanobacterium JSC-12]
Length = 664
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ S R LAV +RP+GKK+W+ D+
Sbjct: 1 MEKGSLVEFRMGSVR-RLAVVERPEGKKHWIAIDE 34
>gi|218246504|ref|YP_002371875.1| exoribonuclease II [Cyanothece sp. PCC 8801]
gi|218166982|gb|ACK65719.1| Exoribonuclease II [Cyanothece sp. PCC 8801]
Length = 671
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYD 141
++KG L+E + +R LAV RP+GKK+WMV D
Sbjct: 1 MEKGKLIEIRVQGER-RLAVVDRPEGKKDWMVID 33
>gi|257059537|ref|YP_003137425.1| exoribonuclease II [Cyanothece sp. PCC 8802]
gi|256589703|gb|ACV00590.1| Exoribonuclease II [Cyanothece sp. PCC 8802]
Length = 671
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYD 141
++KG L+E + +R LAV RP+GKK+WMV D
Sbjct: 1 MEKGKLIEIRVQGER-RLAVVDRPEGKKDWMVID 33
>gi|427718659|ref|YP_007066653.1| exoribonuclease II [Calothrix sp. PCC 7507]
gi|427351095|gb|AFY33819.1| Exoribonuclease II [Calothrix sp. PCC 7507]
Length = 683
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
+ KG L+EF+ DR L V RPDGK W V D+
Sbjct: 1 MDKGTLVEFRVQGDR-RLGVVDRPDGKTRWFVVDE 34
>gi|428207110|ref|YP_007091463.1| exoribonuclease II [Chroococcidiopsis thermalis PCC 7203]
gi|428009031|gb|AFY87594.1| Exoribonuclease II [Chroococcidiopsis thermalis PCC 7203]
Length = 687
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYD 141
+ KG+L+EF+ DR L V RPDGK W V D
Sbjct: 3 IDKGMLVEFRVQGDR-RLGVVDRPDGKTRWFVID 35
>gi|434389380|ref|YP_007099991.1| exoribonuclease R [Chamaesiphon minutus PCC 6605]
gi|428020370|gb|AFY96464.1| exoribonuclease R [Chamaesiphon minutus PCC 6605]
Length = 672
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYD 141
++KG L+EF + +R LA+A RP+GKK+W+ D
Sbjct: 1 MEKGTLVEFWHNGER-RLAIADRPEGKKHWIAID 33
>gi|22298194|ref|NP_681441.1| ribonuclease II [Thermosynechococcus elongatus BP-1]
gi|22294373|dbj|BAC08203.1| ribonuclease II [Thermosynechococcus elongatus BP-1]
Length = 674
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQVL 144
++KG L+EF+ ++ R LAV RP+GKK+W+ D+ L
Sbjct: 1 MEKGTLIEFRVNNQR-RLAVIDRPEGKKHWIAIDEHL 36
>gi|440684659|ref|YP_007159454.1| Exoribonuclease II [Anabaena cylindrica PCC 7122]
gi|428681778|gb|AFZ60544.1| Exoribonuclease II [Anabaena cylindrica PCC 7122]
Length = 685
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
+ KG L+EF+ DR L V RPDGK W V D+
Sbjct: 1 MDKGTLVEFRVQGDR-RLGVVDRPDGKTRWFVVDE 34
>gi|428307273|ref|YP_007144098.1| exoribonuclease II [Crinalium epipsammum PCC 9333]
gi|428248808|gb|AFZ14588.1| Exoribonuclease II [Crinalium epipsammum PCC 9333]
Length = 683
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 105 NQVLQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYD 141
+++++KG L+EF ++ +R LAV RP+GKK+W+ D
Sbjct: 10 SKLVEKGTLIEFWQNGER-RLAVIDRPEGKKHWIAID 45
>gi|414079583|ref|YP_007001007.1| ribonuclease II [Anabaena sp. 90]
gi|413972862|gb|AFW96950.1| ribonuclease II [Anabaena sp. 90]
Length = 686
Score = 37.4 bits (85), Expect = 2.4, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
+ KG L+EF+ DR L V RPDGK +W V D+
Sbjct: 1 MDKGTLVEFRVKGDR-RLGVIDRPDGKTSWFVVDE 34
>gi|56750434|ref|YP_171135.1| ribonuclease II [Synechococcus elongatus PCC 6301]
gi|81299933|ref|YP_400141.1| exoribonuclease II [Synechococcus elongatus PCC 7942]
gi|56685393|dbj|BAD78615.1| ribonuclease II [Synechococcus elongatus PCC 6301]
gi|81168814|gb|ABB57154.1| Exoribonuclease II [Synechococcus elongatus PCC 7942]
Length = 670
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++ G L+EF+ R L V RPDGKKNW+V D+
Sbjct: 1 MEAGTLIEFRLGGQR-HLGVLDRPDGKKNWIVVDE 34
>gi|119509770|ref|ZP_01628915.1| Ribonuclease II [Nodularia spumigena CCY9414]
gi|119465636|gb|EAW46528.1| Ribonuclease II [Nodularia spumigena CCY9414]
Length = 686
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
+ KG L+EF+ DR L V RPDGK W + D+
Sbjct: 1 MDKGTLVEFRVQGDR-RLGVVDRPDGKTRWFIVDE 34
>gi|434393485|ref|YP_007128432.1| Exoribonuclease II [Gloeocapsa sp. PCC 7428]
gi|428265326|gb|AFZ31272.1| Exoribonuclease II [Gloeocapsa sp. PCC 7428]
Length = 685
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ DR L V RPDGK W+ D+
Sbjct: 1 MEKGTLVEFRVQGDR-RLGVVDRPDGKSRWIAVDE 34
>gi|291568149|dbj|BAI90421.1| ribonuclease II [Arthrospira platensis NIES-39]
Length = 673
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 107 VLQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYD 141
+++KG L+EF+ +R LAV RP+GKK+W++ D
Sbjct: 1 MVEKGTLVEFRIHGER-RLAVVARPEGKKHWILVD 34
>gi|409990305|ref|ZP_11273698.1| ribonuclease II, partial [Arthrospira platensis str. Paraca]
gi|409938830|gb|EKN80101.1| ribonuclease II, partial [Arthrospira platensis str. Paraca]
Length = 199
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYD 141
++KG L+EF+ +R LAV RP+GKK+W++ D
Sbjct: 1 MEKGTLVEFRIHGER-RLAVVARPEGKKHWILVD 33
>gi|425463601|ref|ZP_18842931.1| putative enzyme [Microcystis aeruginosa PCC 9809]
gi|389831043|emb|CCI26535.1| putative enzyme [Microcystis aeruginosa PCC 9809]
Length = 671
Score = 35.8 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 108 LQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQ 142
++KG L+EF+ +R L V P+GKK+W+V DQ
Sbjct: 1 MEKGTLVEFRVQGER-RLGVIDHPEGKKDWIVIDQ 34
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.134 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,104,558,983
Number of Sequences: 23463169
Number of extensions: 70537971
Number of successful extensions: 212886
Number of sequences better than 100.0: 97
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 212790
Number of HSP's gapped (non-prelim): 102
length of query: 156
length of database: 8,064,228,071
effective HSP length: 118
effective length of query: 38
effective length of database: 9,590,541,425
effective search space: 364440574150
effective search space used: 364440574150
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 71 (32.0 bits)