Query 045274
Match_columns 156
No_of_seqs 15 out of 17
Neff 2.1
Searched_HMMs 13730
Date Mon Mar 25 20:29:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045274.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/045274hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1vqoa2 b.40.4.5 (A:1-90) N-te 42.5 9.8 0.00071 25.2 3.1 38 106-143 35-73 (90)
2 d2coaa1 b.55.1.1 (A:8-119) Pro 41.5 4.8 0.00035 25.1 1.3 29 107-145 1-29 (112)
3 d1xsba_ d.113.1.1 (A:) Diadeno 29.7 9.4 0.00069 24.5 1.3 21 1-22 6-26 (153)
4 d2zjra2 b.40.4.5 (A:33-127) N- 29.1 26 0.0019 23.5 3.6 44 100-143 34-78 (95)
5 d2exna1 b.165.1.1 (A:1-128) Hy 28.4 12 0.00089 24.9 1.8 22 132-153 22-43 (128)
6 d1id0a_ d.122.1.3 (A:) Histidi 25.8 81 0.0059 20.4 7.0 63 66-130 5-82 (146)
7 d1wi1a_ b.55.1.1 (A:) Calcium- 23.9 11 0.00078 23.1 0.7 15 132-146 24-38 (126)
8 d1rk8c_ b.72.3.1 (C:) Pym (Wit 23.0 15 0.0011 21.2 1.2 18 117-134 3-20 (33)
9 d1rl2a2 b.40.4.5 (A:60-125) N- 22.4 37 0.0027 21.3 3.2 34 110-143 15-49 (66)
10 d1jpma1 c.1.11.2 (A:126-359) L 19.7 54 0.004 22.3 3.9 58 71-148 16-73 (234)
No 1
>d1vqoa2 b.40.4.5 (A:1-90) N-terminal domain of ribosomal protein L2 {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=42.53 E-value=9.8 Score=25.22 Aligned_cols=38 Identities=16% Similarity=0.287 Sum_probs=31.2
Q ss_pred hhhhceeeEEEEecCCce-EEEEEECCCCccceEEeecc
Q 045274 106 QVLQKGLLLEFKKDSDRV-LLAVAQRPDGKKNWMVYDQV 143 (156)
Q Consensus 106 ~~LqkG~LlEf~Kds~R~-lLaVv~rpdGKKNW~v~DQ~ 143 (156)
...-+|.+++++-|..|. -||+|.-.||.|.|+..-+.
T Consensus 35 ~~~i~g~V~~IeyDP~Rsa~iAlv~~~dg~~~yilApeg 73 (90)
T d1vqoa2 35 GDVIAGTVVDIEHDPARSAPVAAVEFEDGDRRLILAPEG 73 (90)
T ss_dssp SCCCEEEEEEEEEETTTTEEEEEEEETTSCEEEECCBTT
T ss_pred cCcccEEEEEEEecCCCCceEEEEEecCCCEEEEECcCC
Confidence 345578999999999885 68999999999999986553
No 2
>d2coaa1 b.55.1.1 (A:8-119) Protein kinase c, d2 type {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.52 E-value=4.8 Score=25.10 Aligned_cols=29 Identities=17% Similarity=0.304 Sum_probs=20.8
Q ss_pred hhhceeeEEEEecCCceEEEEEECCCCccceEEeecccc
Q 045274 107 VLQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQVLV 145 (156)
Q Consensus 107 ~LqkG~LlEf~Kds~R~lLaVv~rpdGKKNW~v~DQ~g~ 145 (156)
||.+|+|+ |-++. .+.=||.|||-|++.+
T Consensus 1 ~lk~GwL~---k~~~~-------~~~wkkRwFvL~~~~L 29 (112)
T d2coaa1 1 TLREGWVV---HYSNK-------DTLRKRHYWRLDCKCI 29 (112)
T ss_dssp CSEEEEEE---ECCSS-------SCCCEEEEEEECSSEE
T ss_pred CceEEEEE---EECCC-------CCCeeEEEEEEEcceE
Confidence 67889887 33332 3556899999998865
No 3
>d1xsba_ d.113.1.1 (A:) Diadenosine tetraphosphate hydrolase (Ap4A hydrolase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.73 E-value=9.4 Score=24.50 Aligned_cols=21 Identities=33% Similarity=0.504 Sum_probs=16.3
Q ss_pred CceeccccccceeccCCCCcce
Q 045274 1 MAVRAVNSCSMFRSAACPPLVS 22 (156)
Q Consensus 1 MavRAvn~CSi~r~~~~pp~~l 22 (156)
|.+||+ ||-+||....+++--
T Consensus 6 m~~~~~-g~i~f~~~~~~~~~~ 26 (153)
T d1xsba_ 6 MALRAC-GLIIFRRCLIPKVDN 26 (153)
T ss_dssp CSEEEE-EEEEEEECSSCSSSS
T ss_pred cchhee-EEEEEeccccccccC
Confidence 899998 898998766666543
No 4
>d2zjra2 b.40.4.5 (A:33-127) N-terminal domain of ribosomal protein L2 {Deinococcus radiodurans [TaxId: 1299]}
Probab=29.06 E-value=26 Score=23.53 Aligned_cols=44 Identities=16% Similarity=0.233 Sum_probs=33.5
Q ss_pred hhhhhhhhhhceeeEEEEecCCce-EEEEEECCCCccceEEeecc
Q 045274 100 EDKLENQVLQKGLLLEFKKDSDRV-LLAVAQRPDGKKNWMVYDQV 143 (156)
Q Consensus 100 ddk~~~~~LqkG~LlEf~Kds~R~-lLaVv~rpdGKKNW~v~DQ~ 143 (156)
|-|-.+..-.+|....++-|..|. -+|+|.-.||.|.|+..-|+
T Consensus 34 Df~R~~~~~~~~~V~~IeYDPnRSa~IALv~y~dG~k~YILap~g 78 (95)
T d2zjra2 34 DFKRRDKSGVNAKVAAIEYDPNRSARIALLHYADGEKRYILAPEG 78 (95)
T ss_dssp CCSCCTTTTCEEEEEEEECCTTTSSCEEEEEETTSCEEEEECBTT
T ss_pred eehhhccCCCCEEEEEEEEcCCCCEEEEEEEcCCCeEEEEEccCC
Confidence 433333344578888888888875 68999999999999998765
No 5
>d2exna1 b.165.1.1 (A:1-128) Hypothetical protein BB0938 {Bordetella bronchiseptica [TaxId: 518]}
Probab=28.43 E-value=12 Score=24.95 Aligned_cols=22 Identities=18% Similarity=0.311 Sum_probs=15.9
Q ss_pred CCccceEEeeccccccCccccc
Q 045274 132 DGKKNWMVYDQVLVETPNAACS 153 (156)
Q Consensus 132 dGKKNW~v~DQ~g~~~si~~~~ 153 (156)
..-+.||++|.+|.-..-..|+
T Consensus 22 ~~DR~wmlvd~~G~fltqR~~P 43 (128)
T d2exna1 22 AYQKRWLVANDAGQWLNRDLCP 43 (128)
T ss_dssp GTCCSEEEEETTSCEECTTTCG
T ss_pred hhceeEEEECCCCCEEEcccCC
Confidence 4567899999999766555443
No 6
>d1id0a_ d.122.1.3 (A:) Histidine kinase PhoQ domain {Escherichia coli [TaxId: 562]}
Probab=25.81 E-value=81 Score=20.44 Aligned_cols=63 Identities=14% Similarity=0.247 Sum_probs=39.6
Q ss_pred chhhhHHHHHHHHHHHHhhhceeeeeeec-------ccc--------cchhhhhhhhhhceeeEEEEecCCceEEEEEEC
Q 045274 66 SVHSLVDSVMQELVAIRKRLRVFAKVKVS-------SGE--------LLEDKLENQVLQKGLLLEFKKDSDRVLLAVAQR 130 (156)
Q Consensus 66 sv~slVdSVleEL~s~Rk~rr~~~s~ki~-------~gE--------llddk~~~~~LqkG~LlEf~Kds~R~lLaVv~r 130 (156)
+|..|++++++++...-..+.+.+...+. ..+ |++|-+.-. .++.-+....+.+.+.+-|-+.
T Consensus 5 ~l~~ll~~~~~~~~~~~~~k~i~i~~~~~~~~~~~~d~~~l~~vl~NLl~NAik~~--~~~i~i~~~~~~~~~~i~V~D~ 82 (146)
T d1id0a_ 5 PVAPLLDNLTSALNKVYQRKGVNISLDISPEISFVGEQNDFVEVMGNVLDNACKYC--LEFVEISARQTDEHLYIVVEDD 82 (146)
T ss_dssp EHHHHHHHHHHHHHHHTTTTTCEEEEECCTTCEEESCHHHHHHHHHHHHHHHHHHC--SSEEEEEEEECSSCEEEEEEES
T ss_pred CHHHHHHHHHHHHHHHHHHCCCEEEEEcCCCcEEEECHHHHHHHHHHHHHHHHHhh--cCCEEEEEEeeCCEEEEEEEee
Confidence 46789999999999888877666665552 111 333333222 2566777777766666666554
No 7
>d1wi1a_ b.55.1.1 (A:) Calcium-dependent activator protein for secretion, CAPS {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.86 E-value=11 Score=23.06 Aligned_cols=15 Identities=33% Similarity=0.177 Sum_probs=11.8
Q ss_pred CCccceEEeeccccc
Q 045274 132 DGKKNWMVYDQVLVE 146 (156)
Q Consensus 132 dGKKNW~v~DQ~g~~ 146 (156)
.=||.|||.++++..
T Consensus 24 ~WkkRwfvL~~~~~~ 38 (126)
T d1wi1a_ 24 RWKKRFFVLVQVSQY 38 (126)
T ss_dssp SCEEEEEEEEEEETT
T ss_pred CceEEEEEEeCCceE
Confidence 358999999988754
No 8
>d1rk8c_ b.72.3.1 (C:) Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=23.03 E-value=15 Score=21.22 Aligned_cols=18 Identities=28% Similarity=0.613 Sum_probs=12.8
Q ss_pred EecCCceEEEEEECCCCc
Q 045274 117 KKDSDRVLLAVAQRPDGK 134 (156)
Q Consensus 117 ~Kds~R~lLaVv~rpdGK 134 (156)
.+|+.-..++--|||||.
T Consensus 3 v~d~~G~~i~atqRpDGt 20 (33)
T d1rk8c_ 3 LQSSEGKFIPATKRPDGT 20 (33)
T ss_dssp EEETTEEEECCEECTTSC
T ss_pred EecCCCcEeccccCCCCc
Confidence 344445668889999994
No 9
>d1rl2a2 b.40.4.5 (A:60-125) N-terminal domain of ribosomal protein L2 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=22.38 E-value=37 Score=21.32 Aligned_cols=34 Identities=21% Similarity=0.403 Sum_probs=26.6
Q ss_pred ceeeEEEEecCCc-eEEEEEECCCCccceEEeecc
Q 045274 110 KGLLLEFKKDSDR-VLLAVAQRPDGKKNWMVYDQV 143 (156)
Q Consensus 110 kG~LlEf~Kds~R-~lLaVv~rpdGKKNW~v~DQ~ 143 (156)
+|.....+-|..| .-+|+|.-.||.|.|+..-|.
T Consensus 15 ~g~V~~IEYDPnRsa~IAlv~y~dG~k~YILap~g 49 (66)
T d1rl2a2 15 PGRVATIEYDPNRSANIALINYADGEKRYIIAPKN 49 (66)
T ss_dssp CEEEEEEEEEGGGTEEEEEEEETTSCEEEEECCTT
T ss_pred CEEEEEEEeCCCCCeEEEEEEcCCCcEEEEEccCC
Confidence 3667777777666 568999999999999987664
No 10
>d1jpma1 c.1.11.2 (A:126-359) L-Ala-D/L-Glu epimerase {Bacillus subtilis [TaxId: 1423]}
Probab=19.67 E-value=54 Score=22.34 Aligned_cols=58 Identities=17% Similarity=0.106 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHhhhceeeeeeecccccchhhhhhhhhhceeeEEEEecCCceEEEEEECCCCccceEEeeccccccC
Q 045274 71 VDSVMQELVAIRKRLRVFAKVKVSSGELLEDKLENQVLQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVYDQVLVETP 148 (156)
Q Consensus 71 VdSVleEL~s~Rk~rr~~~s~ki~~gEllddk~~~~~LqkG~LlEf~Kds~R~lLaVv~rpdGKKNW~v~DQ~g~~~s 148 (156)
.|.+.+|++..+..-=..++.|||..++-+|.-.=..+++.+ |.+-|+..|-|+.-+.
T Consensus 16 pe~~~~~a~~~~~~G~~~~Kikig~~~~~~d~~~i~~ir~~~--------------------g~~~~i~vD~N~~~~~ 73 (234)
T d1jpma1 16 PEEMAADAENYLKQGFQTLKIKVGKDDIATDIARIQEIRKRV--------------------GSAVKLRLDANQGWRP 73 (234)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSSSCHHHHHHHHHHHHHHH--------------------GGGSEEEEECTTCSCH
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHc--------------------Cchhhhhhhcccccch
Confidence 367777777777655556777777777766654444444432 5566788888876543
Done!