BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045275
(470 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 165/406 (40%), Gaps = 91/406 (22%)
Query: 44 PIIGHLHLFYKERKPHKSFAELAEKLGPIFYVQLGRVPAVVVSSNELAKQVLKTHDQVFA 103
P+IGH+ K PH + + ++++ G + +++G P VV+S + +Q L F
Sbjct: 20 PLIGHMLTLGK--NPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALVRQGDDFK 77
Query: 104 SRPNLLSAKYLSVGPAAVTFSP-YGAYWRQARKLCVTEL----LSPKRVNSFKVVLDEEV 158
RP+L + +S G +++FSP G W R+L L ++ +S L+E V
Sbjct: 78 GRPDLYTFTLISNG-QSMSFSPDSGPVWAARRRLAQNGLKSFSIASDPASSTSCYLEEHV 136
Query: 159 NRD----------------------LIFAFATDFFCLAAFGVRFLENEEKEEGQKSRYLA 196
+++ + T+ C FG R+ N +
Sbjct: 137 SKEAEVLISTLQELMAGPGHFNPYRYVVVSVTNVICAICFGRRYDHNHQ----------- 185
Query: 197 SVFVEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGTRNLLNSVEEIFDK--TSKRKQ 254
ELL+ + F E V G + P + LN+ +++ +K + +K
Sbjct: 186 -------ELLSLVNLNNNFGEVVGSGNPADFIPILRYLPNPSLNAFKDLNEKFYSFMQKM 238
Query: 255 LLDTSALLLHGN-----ENLIEVLRRVQKRDDLDVPITDDSLESIVSDMFVGGVDPSTAT 309
+ + G+ ++LIE + Q ++ +V ++D+ + +IV D+F G D T
Sbjct: 239 VKEHYKTFEKGHIRDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTA 298
Query: 310 LEW--------------IMTEL------ARHPRESMRLHP----------------VSFL 333
+ W I EL +R PR S R H V F
Sbjct: 299 ISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFT 358
Query: 334 IPRQSSDKCTLEGYEIPAKTRILINNHAIGRDPKLFENPHDFIPER 379
IP ++ +L+G+ IP + +N I D KL+ NP +F+PER
Sbjct: 359 IPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPER 404
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/397 (19%), Positives = 161/397 (40%), Gaps = 74/397 (18%)
Query: 43 LPIIGHLHLFYKERKPHKSFAELAEKLGPIFYVQLGRVPAVVVSSNELAKQVLKTHDQVF 102
LP++G L + H +F +L +K GPI+ V++G V+V ++LAK+VL + F
Sbjct: 16 LPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDF 75
Query: 103 ASRPNLLSAKYLSVGPAAVTFSPYGAYWRQARKLCVT------------ELLSPKRVNSF 150
+ RP + + S + F+ GA+W+ R+L + E + + +++
Sbjct: 76 SGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEISTL 135
Query: 151 KVVLDEEVNRDL-----IFAFATDFFCLAAFGVRFLENEEKEEGQKSRYLASVFVEVEEL 205
+L + + +F T+ L F + +N + E Y + + +
Sbjct: 136 CDMLATHNGQSIDISFPVFVAVTNVISLICFNTSY-KNGDPELNVIQNYNEGIIDNLSK- 193
Query: 206 LTGFYYGDFFSEWVWPGWLTGYTPRV-------IKGTRNLLNSVEEIFDKTSKRKQLLDT 258
D + V WL + + +K +LLN + E + + + + +
Sbjct: 194 -------DSLVDLV--PWLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNM 244
Query: 259 SALLLHGNENLIEVLRRVQKRDDLDVPITDDSLESIVSDMFVGGVDPSTATLEWIMTELA 318
L+ N + +L ++D+ + + + D+F GV+ +T+ ++W + L
Sbjct: 245 LDTLMQAKMNSDNGNAGPDQDSEL---LSDNHILTTIGDIFGAGVETTTSVVKWTLAFLL 301
Query: 319 RHP-----------------------------------RESMRLHPVS-FLIPRQSSDKC 342
+P RE +RL PV+ LIP +++
Sbjct: 302 HNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDS 361
Query: 343 TLEGYEIPAKTRILINNHAIGRDPKLFENPHDFIPER 379
++ + + T ++IN A+ + K + P F+PER
Sbjct: 362 SIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPER 398
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/401 (20%), Positives = 161/401 (40%), Gaps = 92/401 (22%)
Query: 48 HLHLFYKER---KPHKSFAELAEKLGPIFYVQLGRVPAVVVSSNELAKQVLK---THDQV 101
+L+ F++E+ + H E +K GPI+ +LG + +V + E + K ++ +
Sbjct: 23 NLYHFWREKGSQRIHFRHIENFQKYGPIYREKLGNLESVYIIHPEDVAHLFKFEGSYPER 82
Query: 102 FASRPNLLSAKYLSVGPAAVTFSPYGAYWRQARKLCVTELLSPKRVNSFKVVLDEEVNRD 161
+ P L +Y P V F G W++ R + TE+++P+ + +F +L+ V++D
Sbjct: 83 YDIPPWLAYHRYYQ-KPIGVLFKKSGT-WKKDRVVLNTEVMAPEAIKNFIPLLNP-VSQD 139
Query: 162 LI-----------------------FAFATDFFCLAAFGVRFLENEEKEEGQKSRYLASV 198
+ F FA + FG R EE + +++ +V
Sbjct: 140 FVSLLHKRIKQQGSGKFVGDIKEDLFHFAFESITNVMFGERLGMLEETVNPEAQKFIDAV 199
Query: 199 FVEVEELLTGFYYGDFFSEWVWPGWLTGYTPRV-----IKGTRNLLNSVEEIFDKTSKRK 253
+ + L P + K R+ + + + IF+K K
Sbjct: 200 YKMFHTSVP----------------LLNVPPELYRLFRTKTWRDHVAAWDTIFNKAEKYT 243
Query: 254 QLLDTSALLLHGNENLIEVLRRVQKRDDLDVPITDDSLESIVSDMFVGGVDPSTATLEWI 313
++ N +L + K + + + + +++ +++M GGV+ ++ TL+W
Sbjct: 244 EIFYQDLRRKTEFRNYPGILYCLLKSEKMLL----EDVKANITEMLAGGVNTTSMTLQWH 299
Query: 314 MTELARH-----------------------------------PRESMRLHPVSFLIPRQS 338
+ E+AR +E++RLHP+S + R
Sbjct: 300 LYEMARSLNVQEMLREEVLNARRQAEGDISKMLQMVPLLKASIKETLRLHPISVTLQRYP 359
Query: 339 SDKCTLEGYEIPAKTRILINNHAIGRDPKLFENPHDFIPER 379
L+ Y IPAKT + + +A+GRDP F +P F P R
Sbjct: 360 ESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSSPDKFDPTR 400
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 96/478 (20%), Positives = 170/478 (35%), Gaps = 96/478 (20%)
Query: 44 PIIGHLHLFYKERKPHKSFAELAEKLGPIFYVQLGRVPAVVVSSNELAKQVLKTHDQVFA 103
P++GH+ K PH + + ++++ G + +++G P +V+S + +Q L F
Sbjct: 25 PLLGHVLTLGKN--PHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFK 82
Query: 104 SRPNLLSAKYLSVGPAAVTFSPYGAYWRQARKLCVTEL----LSPKRVNSFKVVLDEEVN 159
RP+L ++ ++ G + + G W R+L L ++ +S L+E V+
Sbjct: 83 GRPDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSCYLEEHVS 142
Query: 160 RDL----------------------IFAFATDFFCLAAFGVRFLENEEKEEGQKSRYLAS 197
++ + + FG F E+ ++ + S
Sbjct: 143 KEAKALISRLQELMAGPGHFDPYNQVVVSVANVIGAMCFGQHFPESSDE--------MLS 194
Query: 198 VFVEVEELLTGFYYG---DFFSEWVW---PGW--LTGYTPRVIKGTRNLLNSVEEIFDKT 249
+ E + G DFF + P + R + + + + FDK
Sbjct: 195 LVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFLWFLQKTVQEHYQDFDKN 254
Query: 250 SKRKQLLDTSALLLHGNENLIEVLRRVQKRDDLDVPITDDSLESIVSDMFVGGVDPSTAT 309
S R T AL H + R ++ I + + ++V+D+F G D T
Sbjct: 255 SVRD---ITGALFKHSKKG---------PRASGNL-IPQEKIVNLVNDIFGAGFDTVTTA 301
Query: 310 LEWIMTELA--------------------RHPRESMR-------------LHPVSFL--- 333
+ W + L R PR S R SFL
Sbjct: 302 ISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFT 361
Query: 334 IPRQSSDKCTLEGYEIPAKTRILINNHAIGRDPKLFENPHDFIPERXXXXXXXXXXXXXX 393
IP ++ TL G+ IP K + +N + DP+L+E+P +F PER
Sbjct: 362 IPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINKPLS 421
Query: 394 XXXXXXXXXXXXXXXXXXXLNAVQWALARLLNHFDWALPRGVSRGDVDLQEVYGFAAR 451
+ LA LL ++++P GV VDL +YG +
Sbjct: 422 EKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVK---VDLTPIYGLTMK 476
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 155/397 (39%), Gaps = 83/397 (20%)
Query: 48 HLHLFYKERKPHK---SFAELAEKLGPIFYVQLGRVPAVVVSSNELAKQVLKTHD---QV 101
+L+ F++E HK + +K GPI+ +LG V +V V E + K+ +
Sbjct: 18 NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSEGPNPER 77
Query: 102 FASRPNLLSAKYLSVGPAAVTFSPYGAYWRQARKLCVTELLSPKRVNSFKVVLDEEVNRD 161
F P + +Y P V A W++ R E+++P+ +F +LD V+RD
Sbjct: 78 FLIPPWVAYHQYYQ-RPIGVLLKKSAA-WKKDRVALNQEVMAPEATKNFLPLLDA-VSRD 134
Query: 162 LI-----------------------FAFATDFFCLAAFGVRFLENEEKEEGQKSRYLASV 198
+ F FA + FG R EE + R++ ++
Sbjct: 135 FVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAI 194
Query: 199 FVEVEELLTGFYYG-DFFSEWVWPGWLTGYTPRVIKGTRNLLNSVEEIFDKTSKRKQLLD 257
+ + D F + W ++ + + + IF K Q
Sbjct: 195 YQMFHTSVPMLNLPPDLFRLFRTKTW------------KDHVAAWDVIFSKADIYTQ--- 239
Query: 258 TSALLLHGNENLIEVLRRVQKRDDLDVPITDDSLESIVSDMFVGGVDPSTATLEWIMTEL 317
L ++ R + R D ++ + +++ V++M GGVD ++ TL+W + E+
Sbjct: 240 NFYWELRQKGSVHHDYRGILYRLLGDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEM 299
Query: 318 ARH-----------------------------------PRESMRLHPVSFLIPRQSSDKC 342
AR+ +E++RLHP+S + R +
Sbjct: 300 ARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDL 359
Query: 343 TLEGYEIPAKTRILINNHAIGRDPKLFENPHDFIPER 379
L Y IPAKT + + +A+GR+P F +P +F P R
Sbjct: 360 VLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTR 396
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 156/397 (39%), Gaps = 83/397 (20%)
Query: 48 HLHLFYKERKPHK---SFAELAEKLGPIFYVQLGRVPAVVVSSNELAKQVLKT---HDQV 101
+L+ F++E HK + +K GPI+ +LG V +V V E + K+ + +
Sbjct: 21 NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSEGPNPER 80
Query: 102 FASRPNLLSAKYLSVGPAAVTFSPYGAYWRQARKLCVTELLSPKRVNSFKVVLDEEVNRD 161
F P + +Y P V A W++ R E+++P+ +F +LD V+RD
Sbjct: 81 FLIPPWVAYHQYYQ-RPIGVLLKKSAA-WKKDRVALNQEVMAPEATKNFLPLLDA-VSRD 137
Query: 162 L-----------------------IFAFATDFFCLAAFGVRFLENEEKEEGQKSRYLASV 198
+F FA + FG R EE + R++ ++
Sbjct: 138 FVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAI 197
Query: 199 FVEVEELLTGFYYG-DFFSEWVWPGWLTGYTPRVIKGTRNLLNSVEEIFDKTSKRKQLLD 257
+ + D F + W ++ + + + IF K Q
Sbjct: 198 YQMFHTSVPMLNLPPDLFRLFRTKTW------------KDHVAAWDVIFSKADIYTQ--- 242
Query: 258 TSALLLHGNENLIEVLRRVQKRDDLDVPITDDSLESIVSDMFVGGVDPSTATLEWIMTEL 317
L ++ R + R D ++ + +++ V++M GGVD ++ TL+W + E+
Sbjct: 243 NFYWELRQKGSVHHDYRGILYRLLGDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEM 302
Query: 318 ARH-----------------------------------PRESMRLHPVSFLIPRQSSDKC 342
AR+ +E++RLHP+S + R +
Sbjct: 303 ARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDL 362
Query: 343 TLEGYEIPAKTRILINNHAIGRDPKLFENPHDFIPER 379
L Y IPAKT + + +A+GR+P F +P +F P R
Sbjct: 363 VLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTR 399
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/403 (21%), Positives = 145/403 (35%), Gaps = 111/403 (27%)
Query: 59 HKSFAELAEKLGPIFYVQLGRVPAVVVSSNELAKQVLKTHDQVFASRPNLLSAKYLSVGP 118
H SFA LA + G +F ++LG P VV++ Q L FA RP+ S + +S G
Sbjct: 31 HLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASFRVVS-GG 89
Query: 119 AAVTFSPYGAYWRQARKLCVTELLS--PKRVNSFKV----VLDEEVN------------- 159
++ F Y +W+ R+ + + + ++ S +V VL E
Sbjct: 90 RSMAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSADGA 149
Query: 160 ----RDLIFAFATDFFCLAAFGVRFLENEEKEEGQKSRYLASVFVEVEELLTGFYYGDFF 215
R L + FG R+ ++ E ELL+ + + F
Sbjct: 150 FLDPRPLTVVAVANVMSAVCFGCRYSHDDP---------------EFRELLS---HNEEF 191
Query: 216 SEWVWPG-------WLTGYTPRVIKG--------TRNLLNSVEEIFDKTSKR-------K 253
V G WL Y P ++ RN N + + F + + +
Sbjct: 192 GRTVGAGSLVDVMPWLQ-YFPNPVRTVFREFEQLNRNFSNFILDKFLRHCESLRPGAAPR 250
Query: 254 QLLDTSALLLHGNENLIEVLRRVQKRDDL-DVPITDDSLESIVSDMFVGGVDPSTATLEW 312
++D A +L + R DL +VP T ++D+F D + L+W
Sbjct: 251 DMMD--AFILSAEKKAAGDSHGGGARLDLENVPAT-------ITDIFGASQDTLSTALQW 301
Query: 313 IMTELARHPRESMRLHP-----------------------VSFL-------------IPR 336
++ R+P R+ ++FL IP
Sbjct: 302 LLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPH 361
Query: 337 QSSDKCTLEGYEIPAKTRILINNHAIGRDPKLFENPHDFIPER 379
++ ++ GY IP T + +N ++ DP + NP +F P R
Sbjct: 362 ATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPAR 404
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 83/394 (21%), Positives = 149/394 (37%), Gaps = 79/394 (20%)
Query: 45 IIGHLHLFYKERKPHKSFAELAEKLGPIFYVQLGRVPAVVVSSNELAKQVLKTHDQVFAS 104
+ G LHL H L +KLGP++ ++LG VV++S ++ + FA
Sbjct: 34 VPGFLHLLQPNLPIH--LLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAG 91
Query: 105 RPNLLSAKYLSVGPAAVTFSPYGAYWRQARKLCVTELLSPKRVNSFKVVLDE-------- 156
RP + S K +S ++ Y W+ +KL + LL R +S + +D+
Sbjct: 92 RPQIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTR-SSMEPWVDQLTQEFCER 150
Query: 157 -EVNRDLIFAFATDFFCLAAFGVRFLENEEKEEGQKSRYLASVFVEVE-------ELLTG 208
V +F L + +L KE+ + V ++ ++L
Sbjct: 151 MRVQAGAPVTIQKEFSLLTCSIICYLTFGNKEDTLVHAFHDCVQDLMKTWDHWSIQILDM 210
Query: 209 FYYGDFFSEWVWPG-WLTGYTPRVIKGTRNLLNSVEEIFDKTSKR---KQLLDTSALLLH 264
+ FF PG W R+ + N + VE+ + + Q D + +L
Sbjct: 211 VPFLRFFPN---PGLW------RLKQAIENRDHMVEKQLRRHKESMVAGQWRDMTDYMLQ 261
Query: 265 GNENLIEVLRRVQKRDDLDVPITDDSLESIVSDMFVGGVDPSTATLEWIMTELARHPR-- 322
G Q+ ++ + + + V D+F+GG + + +TL W + L HP
Sbjct: 262 GVGR--------QRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQ 313
Query: 323 ------------------------------------ESMRLHPVSFL-IPRQSSDKCTLE 345
E +RL PV L +P +++ ++
Sbjct: 314 RRLQEELDRELGPGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIF 373
Query: 346 GYEIPAKTRILINNHAIGRDPKLFENPHDFIPER 379
GY+IP ++ N D ++E PH+F P+R
Sbjct: 374 GYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDR 407
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 144/377 (38%), Gaps = 69/377 (18%)
Query: 58 PHKSFAELAEKLGPIFYVQLGRVPAVVVSSNELAKQVLKTHDQVFASRPNL-LSAKYLSV 116
PH + ++ G IF + LG + VV++ ++ K+ L ++FA RP L L K +
Sbjct: 36 PHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKM 95
Query: 117 GPAAVTFSPYGAYWRQARKLCVTEL-LSPKRVNSFKVVLDEEVN---------------- 159
G + S YG W R+L V SF+ + EE
Sbjct: 96 G--GLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIETYKGRPFDF 153
Query: 160 RDLIFAFATDFFCLAAFGVRFLENEEKEEGQKSRYLASVFVEVEELLTGFYYGDFFSEWV 219
+ LI ++ L FG RF E + Q L S VE+ + F Y F
Sbjct: 154 KQLITNAVSNITNLIIFGERF--TYEDTDFQHMIELFSENVELAASASVFLYNAF----P 207
Query: 220 WPGWLT-GYTPRVIKGTRNLLNSVEEIFDKTSKRKQLLDTSALLLHGNENLIEVLRRVQK 278
W G L G ++ + + + + + +K S ++ L H + ++ + Q
Sbjct: 208 WIGILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRK----PQLPQHFVDAYLDEMD--QG 261
Query: 279 RDDLDVPITDDSLESIVSDMFVGGVDPSTATLEWIMTELARHP----------------- 321
++D + ++L V ++ + G + +T L W + +A +P
Sbjct: 262 KNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPN 321
Query: 322 ------------------RESMRL-HPVSFLIPRQSSDKCTLEGYEIPAKTRILINNHAI 362
E +R + V I +S+ + GY IP T ++ N +++
Sbjct: 322 GKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSV 381
Query: 363 GRDPKLFENPHDFIPER 379
D K + +P F PER
Sbjct: 382 HFDEKYWRDPEVFHPER 398
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 144/377 (38%), Gaps = 69/377 (18%)
Query: 58 PHKSFAELAEKLGPIFYVQLGRVPAVVVSSNELAKQVLKTHDQVFASRPNL-LSAKYLSV 116
PH + ++ G IF + LG + VV++ ++ K+ L ++FA RP L L K +
Sbjct: 36 PHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKM 95
Query: 117 GPAAVTFSPYGAYWRQARKLCVTEL-LSPKRVNSFKVVLDEEVN---------------- 159
G + S YG W R+L V SF+ + EE
Sbjct: 96 G--GLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIETYKGRPFDF 153
Query: 160 RDLIFAFATDFFCLAAFGVRFLENEEKEEGQKSRYLASVFVEVEELLTGFYYGDFFSEWV 219
+ LI ++ L FG RF E + Q L S VE+ + F Y F
Sbjct: 154 KQLITNAVSNITNLIIFGERF--TYEDTDFQHMIELFSENVELAASASVFLYNAF----P 207
Query: 220 WPGWLT-GYTPRVIKGTRNLLNSVEEIFDKTSKRKQLLDTSALLLHGNENLIEVLRRVQK 278
W G L G ++ + + + + + +K S ++ L H + ++ + Q
Sbjct: 208 WIGILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRK----PQLPQHFVDAYLDEMD--QG 261
Query: 279 RDDLDVPITDDSLESIVSDMFVGGVDPSTATLEWIMTELARHP----------------- 321
++D + ++L V ++ + G + +T L W + +A +P
Sbjct: 262 KNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPN 321
Query: 322 ------------------RESMRL-HPVSFLIPRQSSDKCTLEGYEIPAKTRILINNHAI 362
E +R + V I +S+ + GY IP T ++ N +++
Sbjct: 322 GKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSV 381
Query: 363 GRDPKLFENPHDFIPER 379
D K + +P F PER
Sbjct: 382 HFDEKYWRDPEVFHPER 398
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/386 (19%), Positives = 144/386 (37%), Gaps = 92/386 (23%)
Query: 61 SFAELAEKLGPIFYVQLGRVPAVVVSSNELAKQVLKTHDQVFASRPNLLSAKYLSVGP-- 118
F +L + G +F +QL P VV++ ++ L TH + A RP + + L GP
Sbjct: 35 CFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRS 94
Query: 119 AAVTFSPYGAYWRQARKLCVTELLSPKRVNSFKVVLDEEVNRD---LIFAFA-------- 167
V + YG WR+ R+ V+ L + + K L++ V + L AFA
Sbjct: 95 QGVFLARYGPAWREQRRFSVSTL---RNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFR 151
Query: 168 ---------TDFFCLAAFGVRFLENEEK--------EEG--QKSRYLASVFVEVEELLTG 208
++ G RF ++ + +EG ++S +L V V LL
Sbjct: 152 PNGLLDKAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLH- 210
Query: 209 FYYGDFFSEWVWPGWLTGYTPRVIKGTRNLLNSVEEIFDKTSKRKQLLDTSALLLHGNEN 268
+ +V++ + L ++E+ ++ + D + E
Sbjct: 211 ---------------IPALAGKVLRFQKAFLTQLDELL---TEHRMTWDPAQPPRDLTEA 252
Query: 269 LIEVLRRVQKRDDLDVPITDDSLESIVSDMFVGGVDPSTATLEWIMTELARHPRESMRLH 328
+ + + + + + D++L +V+D+F G+ ++ TL W + + HP R+
Sbjct: 253 FLAEMEKA--KGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQ 310
Query: 329 P------------------------------------VSFLIPRQSSDKCTLEGYEIPAK 352
V + +S ++G+ IP
Sbjct: 311 QEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKG 370
Query: 353 TRILINNHAIGRDPKLFENPHDFIPE 378
T ++ N ++ +D ++E P F PE
Sbjct: 371 TTLITNLSSVLKDEAVWEKPFRFHPE 396
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 143/383 (37%), Gaps = 69/383 (18%)
Query: 48 HLHLFYKERKPHKSFAELAEKLGPIFYVQLG--RVPAVVVSSN-ELAKQVLKTHDQVFAS 104
HLHL + H++F EL GPIF LG R+ V++ + E +QV H
Sbjct: 37 HLHL-----EMHQTFQEL----GPIFRYNLGGPRMVCVMLPEDVEKLQQVDSLHPCRMIL 87
Query: 105 RPNLLSAKYLSVGPAAVTFSPYGAYWRQARKLCVTELLSPKRVNSFKVVLDEEVNRDL-- 162
P + ++ G F G WR R ++LSPK V F ++D V RD
Sbjct: 88 EPWVAYRQH--RGHKCGVFLLNGPEWRFNRLRLNPDVLSPKAVQRFLPMVDA-VARDFSQ 144
Query: 163 ---------------------IFAFATDFFCLAAFGVRFLENEEKEEGQKSRYLASVFVE 201
IF + + LA FG R +L ++ V
Sbjct: 145 ALKKKVLQNARGSLTLDVQPSIFHYTIEASNLALFGERLGLVGHSPSSASLNFLHALEVM 204
Query: 202 VEELLTGFYYGDFFSEWVWP--------GW--LTGYTPRVIKGT---------RNLLNSV 242
+ + + S W+ P W + Y I+ ++ V
Sbjct: 205 FKSTVQLMFMPRSLSRWISPKVWKEHFEAWDCIFQYGDNCIQKIYQELAFNRPQHYTGIV 264
Query: 243 EEIFDKTSKRKQLLDTSALLLHGNE------NLIEVLRRVQKRDDLDVPITDDSLESIVS 296
E+ K + + +++ L L+ L + + D+ + +SL + S
Sbjct: 265 AELLLKAELSLEAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAAS 324
Query: 297 DMFVGGVDPSTATLEWIMTELARHPRESMRLHPVSFLIPRQSSDKCTLEGYEIPAKTRIL 356
P AT E + A +E++RL+PV + R S L+ Y IPA T +
Sbjct: 325 I----SEHPQKATTELPLLRAAL--KETLRLYPVGLFLERVVSSDLVLQNYHIPAGTLVQ 378
Query: 357 INNHAIGRDPKLFENPHDFIPER 379
+ +++GR+ LF P + P+R
Sbjct: 379 VFLYSLGRNAALFPRPERYNPQR 401
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 132/322 (40%), Gaps = 46/322 (14%)
Query: 43 LPIIGHLHLFYKERKPHKSFAELAEKLGPIFYVQLGRVPAVVVSSNELAKQVLKTHDQVF 102
LPIIG++ L + KSF ++ GP+F V G P VV E K+ L + + F
Sbjct: 18 LPIIGNM-LQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGYEAVKEALIDNGEEF 76
Query: 103 ASRPNLLSAKYLSVGPAAVTFSPYGAYWRQARKLCVTELLS--------PKRVNSFKVVL 154
+ R N ++ ++ G + S G W++ R+ +T L + RV L
Sbjct: 77 SGRGNSPISQRITKGLGII--SSNGKRWKEIRRFSLTTLRNFGMGKRSIEDRVQEEAHCL 134
Query: 155 DEEVNR------DLIFAFA---TDFFCLAAFGVRFLENEEKEEGQKSRYLASVFVEVEEL 205
EE+ + D F + C F RF + Q L F E +
Sbjct: 135 VEELRKTKASPCDPTFILGCAPCNVICSVVFQKRF-----DYKDQNFLTLMKRFNENFRI 189
Query: 206 LTGFYYGDFFSEWV-----WPGWLTGYTPRVIKGTRNLLNSVEEIFDKTSKRKQLLDTSA 260
L S W+ +P + + K +N+ + I +K + + LD
Sbjct: 190 LN--------SPWIQVCNNFPLLIDCFPGTHNKVLKNVALTRSYIREKVKEHQASLD--- 238
Query: 261 LLLHGNENLIE--VLRRVQKRDDLDVPITDDSLESIVSDMFVGGVDPSTATLEWIMTELA 318
++ + I+ +++ Q++D+ ++L V+D+FV G + ++ TL + + L
Sbjct: 239 --VNNPRDFIDCFLIKMEQEKDNQKSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLLL 296
Query: 319 RHPRESMRLH-PVSFLIPRQSS 339
+HP + ++ + +I R S
Sbjct: 297 KHPEVTAKVQEEIDHVIGRHRS 318
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 60/138 (43%), Gaps = 34/138 (24%)
Query: 276 VQKRDDLDVPITDDSLESIVSDMFVGGVDPSTATLEWIMTELARHPR------------- 322
++ +DD PI + + V + G + +T+ W++ LA HP
Sbjct: 249 LEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVT 308
Query: 323 ---------------------ESMRLHPVSFLIPRQSSDKCTLEGYEIPAKTRILINNHA 361
E+MRL P +++ R++ + L GY IPA I+ + +A
Sbjct: 309 GGRPVAFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYA 368
Query: 362 IGRDPKLFENPHDFIPER 379
I RDPK +++ +F P+R
Sbjct: 369 IQRDPKSYDDNLEFDPDR 386
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 155/392 (39%), Gaps = 78/392 (19%)
Query: 43 LPIIGHLHLFYKERKPHKSFAELAEKLGPIFYVQLGRVPAVVVSSNELAKQVLKTHDQVF 102
PIIG++ L + KS + +E GP+F V LG P VV+ E K+ L + F
Sbjct: 18 FPIIGNI-LQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGYEAVKEALVDLGEEF 76
Query: 103 ASRPNLLSAKYLSVGPAAVTFSPYGAYWRQARKLCVTELLS--------PKRVNSFKVVL 154
A R ++ + +S G + FS W++ R+ + L + R+ L
Sbjct: 77 AGRGSVPILEKVSKG-LGIAFS-NAKTWKEMRRFSLMTLRNFGMGKRSIEDRIQEEARCL 134
Query: 155 DEEVNR------DLIFAFA---TDFFCLAAFGVRFLENEEKEEGQKSRYLASVFVEVEEL 205
EE+ + D F + C F RF +E + + + S+ VE L
Sbjct: 135 VEELRKTNASPCDPTFILGCAPCNVICSVIFHNRFDYKDE----EFLKLMESLHENVELL 190
Query: 206 LTGFY--YGDFFSEWVWPGWLTGYTPRVIKGTRNLLNSVEE-IFDKTSKRKQLLDTSALL 262
T + Y +F P L Y P + K + ++ I +K + ++LLD
Sbjct: 191 GTPWLQVYNNF------PALL-DYFPGIHKTLLKNADYIKNFIMEKVKEHQKLLD----- 238
Query: 263 LHGNENLIEV-LRRVQKRDDLDVPITDDSLESIVSDMFVGGVDPSTATLEWIMTELARHP 321
++ + I+ L ++++ ++L+ T +SL VSD+F G + ++ TL + + L +HP
Sbjct: 239 VNNPRDFIDCFLIKMEQENNLE--FTLESLVIAVSDLFGAGTETTSTTLRYSLLLLLKHP 296
Query: 322 RESMR-----------------------------LHPVSFLI-------PRQSSDKCTLE 345
+ R +H + I P +
Sbjct: 297 EVAARVQEEIERVIGRHRSPCMQDRSRMPYTDAVIHEIQRFIDLLPTNLPHAVTRDVRFR 356
Query: 346 GYEIPAKTRILINNHAIGRDPKLFENPHDFIP 377
Y IP T I+ + ++ D K F NP F P
Sbjct: 357 NYFIPKGTDIITSLTSVLHDEKAFPNPKVFDP 388
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 87/418 (20%), Positives = 150/418 (35%), Gaps = 125/418 (29%)
Query: 44 PIIGHL-HLFYKE--RKPHKSFAELAEKLGPIFYVQLGRVPAVVVSSNELAKQVLKTHDQ 100
P++G L +F+K +K H + AE +K G IF ++LG + D
Sbjct: 33 PLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLG------------------SFDS 74
Query: 101 VFASRPNLLSAKYL--SVGPAAVTFSPYGAY-----------------WRQARKLCVTEL 141
V P+LL A Y S P + P+ AY W++ R +L
Sbjct: 75 VHLGSPSLLEALYRTESAHPQRLEIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKL 134
Query: 142 LSP-------KRVNS----FKVVLDEEVNR-----DL---IFAFATDFFCLAAFGVRF-- 180
+ P K++N F +DE + DL + ++ + CL + RF
Sbjct: 135 MKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYSELNKWSFESICLVLYEKRFGL 194
Query: 181 LENEEKEEG----QKSRYLASVFVEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGTR 236
L+ E +EE + + S F ++ ++T + VW +
Sbjct: 195 LQKETEEEALTFITAIKTMMSTFGKM--MVTPVELHKRLNTKVWQAHTLAWD-------- 244
Query: 237 NLLNSVEEIFDKTSKRKQLLDTSALLLHGNENLIEVLRRVQKRDDLDVPITDDSLESIVS 296
+ SV+ D +R + + + L + ++D L + L + V+
Sbjct: 245 TIFKSVKPCIDNRLQR-----------YSQQPGADFLCDIYQQDHL----SKKELYAAVT 289
Query: 297 DMFVGGVDPSTATLEWIMTELARHP----------------------------------- 321
++ + V+ + +L WI+ L+R+P
Sbjct: 290 ELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACL 349
Query: 322 RESMRLHPVSFLIPRQSSDKCTLEGYEIPAKTRILINNHAIGRDPKLFENPHDFIPER 379
+ESMRL P R L Y +P T + +N +G FE+ H F PER
Sbjct: 350 KESMRLTPSVPFTTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPER 407
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 150/392 (38%), Gaps = 74/392 (18%)
Query: 43 LPIIGHLHLFYKERKPHKSFAELAEKLGPIFYVQLGRVPAVVVSSNELAKQVLKTHDQVF 102
LPIIG+L + P KSF LA++ GP+F + +G VV+ + K+ L + F
Sbjct: 18 LPIIGNLFQLELKNIP-KSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEF 76
Query: 103 ASRPNLLSAKYLSVGPAAVTFSPYGAYWRQARKLCVTELL--------SPKRVNSFKVVL 154
+ R +L + + + F+ G W+ R+ +T L + R+ L
Sbjct: 77 SGRGDL--PAFHAHRDRGIIFN-NGPTWKDIRRFSLTTLRNYGMGKQGNESRIQREAHFL 133
Query: 155 DEEVNRDLIFAFATDFFCLAA---------FGVRFLENEEKEEGQKSRYLASVFVEVEEL 205
E + + F F A F F N+E K L +F E L
Sbjct: 134 LEALRKTQGQPFDPTFLIGCAPCNVIADILFRKHFDYNDE-----KFLRLMYLFNENFHL 188
Query: 206 LTGFY---YGDFFSEWVWPGWLTGYTPRVIKGTRNLLNSVEEIFDKTSKRKQLLDTSALL 262
L+ + Y +F S + +L G +VIK N+ E + ++ + Q LD +
Sbjct: 189 LSTPWLQLYNNFPS---FLHYLPGSHRKVIK---NVAEVKEYVSERVKEHHQSLDPNCPR 242
Query: 263 LHGNENLIEVLRRVQKRDDLDVPITDDSLESIVSDMFVGGVDPSTATLEWIMTELARHPR 322
+ L+E+ + + L T D + V+D+F G + ++ TL + + L ++P
Sbjct: 243 DLTDCLLVEMEKEKHSAERL---YTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPE 299
Query: 323 ESMRLHP------------------------------------VSFLIPRQSSDKCTLEG 346
+LH V +P +++ G
Sbjct: 300 IEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRG 359
Query: 347 YEIPAKTRILINNHAIGRDPKLFENPHDFIPE 378
Y IP T ++ ++ D + F +P F PE
Sbjct: 360 YLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPE 391
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 140/400 (35%), Gaps = 91/400 (22%)
Query: 43 LPIIGHLHLFYKERKPHKSFAELAEKLGPIFYVQLGRVPAVVVSSNELAKQVLKTHDQVF 102
LP++G+L L + +SF L EK G +F V LG P VV+ + ++ L + F
Sbjct: 18 LPVLGNL-LQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAF 76
Query: 103 ASRPNLLSAKYLSVGPAAVTFSPYGAYWRQARKLCVTELLS--------PKRVNSFKVVL 154
+ R + + G V F+ G WR R+ + + +R+ L
Sbjct: 77 SGRGKIAVVDPIFQG-YGVIFA-NGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCL 134
Query: 155 DEEVNRD---------LIFAFATDFFCLAAFGVRF----------LENEEKEEGQKSRYL 195
EE+ + L + ++ C FG RF L+ + S +
Sbjct: 135 VEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFS 194
Query: 196 ASVFVEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGTRNLLNSVEEIFDKTSKRKQL 255
+ VF EL +GF +PG T R I RNL I K +
Sbjct: 195 SQVF----ELFSGFL-------KYFPG-----THRQI--YRNLQEINTFIGQSVEKHRAT 236
Query: 256 LDTSALLLHGNENLIEV--LRRVQKRDDLDVPITDDSLESIVSDMFVGGVDPSTATLEWI 313
LD S + I+V LR + + D +L V +F G + ++ TL +
Sbjct: 237 LDPS-----NPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFAAGTETTSTTLRYG 291
Query: 314 MTELARHPRESMRLHP------------------------------------VSFLIPRQ 337
+ ++P + R+ + F +P
Sbjct: 292 FLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHT 351
Query: 338 SSDKCTLEGYEIPAKTRILINNHAIGRDPKLFENPHDFIP 377
+ GY IP T + + DP+ FE P+ F P
Sbjct: 352 VTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNP 391
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 140/400 (35%), Gaps = 91/400 (22%)
Query: 43 LPIIGHLHLFYKERKPHKSFAELAEKLGPIFYVQLGRVPAVVVSSNELAKQVLKTHDQVF 102
LP++G+L L + +SF L EK G +F V LG P VV+ + ++ L + F
Sbjct: 18 LPVLGNL-LQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAF 76
Query: 103 ASRPNLLSAKYLSVGPAAVTFSPYGAYWRQARKLCVTELLS--------PKRVNSFKVVL 154
+ R + + G V F+ G WR R+ + + +R+ L
Sbjct: 77 SGRGKIAVVDPIFQG-YGVIFA-NGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCL 134
Query: 155 DEEVNRD---------LIFAFATDFFCLAAFGVRF----------LENEEKEEGQKSRYL 195
EE+ + L + ++ C FG RF L+ + S +
Sbjct: 135 VEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFS 194
Query: 196 ASVFVEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGTRNLLNSVEEIFDKTSKRKQL 255
+ VF EL +GF +PG T R I RNL I K +
Sbjct: 195 SQVF----ELFSGFL-------KYFPG-----THRQI--YRNLQEINTFIGQSVEKHRAT 236
Query: 256 LDTSALLLHGNENLIEV--LRRVQKRDDLDVPITDDSLESIVSDMFVGGVDPSTATLEWI 313
LD S + I+V LR + + D +L V +F G + ++ TL +
Sbjct: 237 LDPS-----NPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYG 291
Query: 314 MTELARHPRESMRLHP------------------------------------VSFLIPRQ 337
+ ++P + R+ + F +P
Sbjct: 292 FLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHT 351
Query: 338 SSDKCTLEGYEIPAKTRILINNHAIGRDPKLFENPHDFIP 377
+ GY IP T + + DP+ FE P+ F P
Sbjct: 352 VTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNP 391
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 140/400 (35%), Gaps = 91/400 (22%)
Query: 43 LPIIGHLHLFYKERKPHKSFAELAEKLGPIFYVQLGRVPAVVVSSNELAKQVLKTHDQVF 102
LP++G+L L + +SF L EK G +F V LG P VV+ + ++ L + F
Sbjct: 18 LPVLGNL-LQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAF 76
Query: 103 ASRPNLLSAKYLSVGPAAVTFSPYGAYWRQARKLCVTELLS--------PKRVNSFKVVL 154
+ R + + G V F+ G WR R+ + + +R+ L
Sbjct: 77 SGRGKIAVVDPIFQG-YGVIFA-NGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCL 134
Query: 155 DEEVNRD---------LIFAFATDFFCLAAFGVRF----------LENEEKEEGQKSRYL 195
EE+ + L + ++ C FG RF L+ + S +
Sbjct: 135 VEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFS 194
Query: 196 ASVFVEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGTRNLLNSVEEIFDKTSKRKQL 255
+ VF EL +GF +PG T R I RNL I K +
Sbjct: 195 SQVF----ELFSGFL-------KYFPG-----THRQI--YRNLQEINTFIGQSVEKHRAT 236
Query: 256 LDTSALLLHGNENLIEV--LRRVQKRDDLDVPITDDSLESIVSDMFVGGVDPSTATLEWI 313
LD S + I+V LR + + D +L V +F G + ++ TL +
Sbjct: 237 LDPS-----NPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYG 291
Query: 314 MTELARHPRESMRLHP------------------------------------VSFLIPRQ 337
+ ++P + R+ + F +P
Sbjct: 292 FLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHT 351
Query: 338 SSDKCTLEGYEIPAKTRILINNHAIGRDPKLFENPHDFIP 377
+ GY IP T + + DP+ FE P+ F P
Sbjct: 352 VTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNP 391
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 77/394 (19%), Positives = 135/394 (34%), Gaps = 79/394 (20%)
Query: 43 LPIIGHLHLFYKERKPHKSFAELAEKLGPIFYVQLGRVPAVVVSSNELAKQVLKTHDQVF 102
LP++G+L L + +SF L EK G +F V LG P VV+ + ++ L + F
Sbjct: 18 LPVLGNL-LQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAF 76
Query: 103 ASRPNLLSAKYLSVGPAAVTFSPYGAYWRQARKLCVTELLS--------PKRVNSFKVVL 154
+ R + + G V F+ G WR R+ + + +R+ L
Sbjct: 77 SGRGKIAVVDPIFQG-YGVIFA-NGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCL 134
Query: 155 DEEVNRD---------LIFAFATDFFCLAAFGVRFLENEEKEEGQKSRYLASVFVEVEEL 205
EE+ + L + ++ C FG RF Y VF+ + +L
Sbjct: 135 VEELRKSKGALLDNTLLFHSITSNIICSIVFGKRF------------DYKDPVFLRLLDL 182
Query: 206 LTGFYYGDFFSEWVWPGWLTGYTPRVIKGTRNLLNSVEE----IFDKTSKRKQLLDTSAL 261
+ +G+ R + +++E I K + LD S
Sbjct: 183 FFQSFSLISSFSSQVFELFSGFLKHFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPS-- 240
Query: 262 LLHGNENLIEV--LRRVQKRDDLDVPITDDSLESIVSDMFVGGVDPSTATLEWIMTELAR 319
+ I+V LR + + D +L V +F G + ++ TL + + +
Sbjct: 241 ---NPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLK 297
Query: 320 HPRESMRLHP------------------------------------VSFLIPRQSSDKCT 343
+P + R+ + F +P +
Sbjct: 298 YPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQ 357
Query: 344 LEGYEIPAKTRILINNHAIGRDPKLFENPHDFIP 377
GY IP T + + DP+ FE P+ F P
Sbjct: 358 FRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNP 391
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 76/374 (20%), Positives = 137/374 (36%), Gaps = 70/374 (18%)
Query: 60 KSFAELAEKLGPIFYVQLGRVPAVVVSSNELAKQVLKTHDQVFASRPNLLSAKYLSVGPA 119
KSF EK G +F V LG P V++ E ++ L + F+ R + G
Sbjct: 34 KSFLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRG-Y 92
Query: 120 AVTFSPYGAYWRQARKLCVTELLS--------PKRVNSFKVVLDEEVNR------DLIFA 165
V F+ G W+ R+ VT + +R+ L EE+ + D F
Sbjct: 93 GVIFAN-GNRWKVLRRFSVTTMRDFGMGKRSVEERIQEEAQCLIEELRKSKGALMDPTFL 151
Query: 166 FAT---DFFCLAAFGVRFLENEEKEEGQKSRYLASVFVEVEELLTGFYYGDFFSEWVWPG 222
F + + C FG RF + Q+ + ++F + L++ +G F ++ G
Sbjct: 152 FQSITANIICSIVFGKRF-----HYQDQEFLKMLNLFYQTFSLISSV-FGQLFE--LFSG 203
Query: 223 WLTGYTPRVIKGTRNLLNSVEEIFDKTSKRKQLLDTSALLLHGNENLIE--VLRRVQKRD 280
+L + + +NL I K ++ LD SA +LI+ +L +++
Sbjct: 204 FLKHFPGAHRQVYKNLQEINAYIGHSVEKHRETLDPSA-----PRDLIDTYLLHMEKEKS 258
Query: 281 DLDVPITDDSLESIVSDMFVGGVDPSTATLEWIMTELARHPRESMR-------------- 326
+ + +L +F G + ++ TL + + ++P + R
Sbjct: 259 NAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRP 318
Query: 327 --LHPVSFL--------------------IPRQSSDKCTLEGYEIPAKTRILINNHAIGR 364
LH + + +P + + GY IP T + +
Sbjct: 319 PELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALH 378
Query: 365 DPKLFENPHDFIPE 378
DP FE P F P+
Sbjct: 379 DPHYFEKPDAFNPD 392
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 140/400 (35%), Gaps = 91/400 (22%)
Query: 43 LPIIGHLHLFYKERKPHKSFAELAEKLGPIFYVQLGRVPAVVVSSNELAKQVLKTHDQVF 102
LP++G+L L + +SF L EK G +F V LG P VV+ + ++ L + F
Sbjct: 18 LPVLGNL-LQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAF 76
Query: 103 ASRPNLLSAKYLSVGPAAVTFSPYGAYWRQARKLCVTELLS--------PKRVNSFKVVL 154
+ R + + G V F+ G WR R+ + + +R+ L
Sbjct: 77 SGRGKIAVVDPIFQG-YGVIFA-NGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCL 134
Query: 155 DEEVNRD---------LIFAFATDFFCLAAFGVRF----------LENEEKEEGQKSRYL 195
EE+ + L + ++ C FG RF L+ + S +
Sbjct: 135 VEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFS 194
Query: 196 ASVFVEVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGTRNLLNSVEEIFDKTSKRKQL 255
+ VF EL +GF +PG T R I RNL I K +
Sbjct: 195 SQVF----ELFSGFL-------KYFPG-----THRQI--YRNLQEINTFIGQSVEKHRAT 236
Query: 256 LDTSALLLHGNENLIEV--LRRVQKRDDLDVPITDDSLESIVSDMFVGGVDPSTATLEWI 313
LD S + I+V LR + + D +L V +F G + ++ TL +
Sbjct: 237 LDPS-----NPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYG 291
Query: 314 MTELARHPRESMRLHP------------------------------------VSFLIPRQ 337
+ ++P + R+ + F +P
Sbjct: 292 FLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHT 351
Query: 338 SSDKCTLEGYEIPAKTRILINNHAIGRDPKLFENPHDFIP 377
+ GY IP T + + DP+ FE P+ F P
Sbjct: 352 VTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNP 391
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 61 SFAELAEKLGPIFYVQLGRVPAVVVSSNELAKQVLKTHDQVFASRPNLLSAKYLSVGP-- 118
F +L + G +F +QL P VV++ ++ L TH + A RP + + L GP
Sbjct: 35 CFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRS 94
Query: 119 AAVTFSPYGAYWRQARKLCVTEL 141
V + YG WR+ R+ V+ L
Sbjct: 95 QGVFLARYGPAWREQRRFSVSTL 117
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/127 (19%), Positives = 48/127 (37%), Gaps = 36/127 (28%)
Query: 288 DDSLESIVSDMFVGGVDPSTATLEWIMTELARHPRESMRLHP------------------ 329
D++L +V+D+F G+ ++ TL W + + HP R+
Sbjct: 270 DENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQA 329
Query: 330 ------------------VSFLIPRQSSDKCTLEGYEIPAKTRILINNHAIGRDPKLFEN 371
V + +S ++G+ IP T ++ N ++ +D ++E
Sbjct: 330 HMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEK 389
Query: 372 PHDFIPE 378
P F PE
Sbjct: 390 PFRFHPE 396
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 147/397 (37%), Gaps = 81/397 (20%)
Query: 43 LPIIGHLHLFYKERKPHKSFAELAEKLGPIFYVQLGRVPAVVVSSNELAKQVLKTHDQVF 102
LP+IG++ L + KS L++ GP+F + G P VV+ E K+ L + F
Sbjct: 17 LPVIGNI-LQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEF 75
Query: 103 ASRPNLLSAKYLSVGPAAVTFSPYGAYWRQARKLCVTELLS--------PKRVNSFKVVL 154
+ R A+ + G + FS G W++ R+ + L + RV L
Sbjct: 76 SGRGIFPLAERANRG-FGIVFS-NGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCL 133
Query: 155 DEEVNR------DLIFAFAT---DFFCLAAFGVRFLENEEKEEGQKSRYLASVFVEVEEL 205
EE+ + D F + C F RF + Q+ L E E+
Sbjct: 134 VEELRKTKASPCDPTFILGCAPCNVICSIIFHKRF-----DYKDQQFLNLMEKLNENIEI 188
Query: 206 LTGFYYGDFFSEWV-----WPGWLTGYTPRVIKGTRNLLNSVEEIFDKTSKRKQLLDTSA 260
L+ S W+ +P L + K +N+ I +K + ++ +D
Sbjct: 189 LS--------SPWIQVYNNFPALLDYFPGTHNKLLKNVAFMKSYILEKVKEHQESMD--- 237
Query: 261 LLLHGNENLIEVLRRVQKRDDLDVP--ITDDSLESIVSDMFVGGVDPSTATLEWIMTELA 318
++ ++ I+ +++ + P T +SLE+ D+F G + ++ TL + + L
Sbjct: 238 --MNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLL 295
Query: 319 RHPRESMR-----------------------------LHPVSFLI-------PRQSSDKC 342
+HP + + +H V I P +
Sbjct: 296 KHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDI 355
Query: 343 TLEGYEIPAKTRILINNHAIGRDPKLFENPHDFIPER 379
Y IP T ILI+ ++ D K F NP F P
Sbjct: 356 KFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHH 392
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 35/114 (30%)
Query: 301 GGVDPSTATLEWIMTELARHP-----------------------------------RESM 325
G + +++ L +IM ELA HP E++
Sbjct: 285 AGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETL 344
Query: 326 RLHPVSFLIPRQSSDKCTLEGYEIPAKTRILINNHAIGRDPKLFENPHDFIPER 379
RL P++ + R + G IP ++I ++A+ RDPK + P F+PER
Sbjct: 345 RLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPER 398
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 35/114 (30%)
Query: 301 GGVDPSTATLEWIMTELARHP-----------------------------------RESM 325
G + +++ L +IM ELA HP E++
Sbjct: 284 AGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETL 343
Query: 326 RLHPVSFLIPRQSSDKCTLEGYEIPAKTRILINNHAIGRDPKLFENPHDFIPER 379
RL P++ + R + G IP ++I ++A+ RDPK + P F+PER
Sbjct: 344 RLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPER 397
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 35/114 (30%)
Query: 301 GGVDPSTATLEWIMTELARHP-----------------------------------RESM 325
G + +++ L +IM ELA HP E++
Sbjct: 283 AGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETL 342
Query: 326 RLHPVSFLIPRQSSDKCTLEGYEIPAKTRILINNHAIGRDPKLFENPHDFIPER 379
RL P++ + R + G IP ++I ++A+ RDPK + P F+PER
Sbjct: 343 RLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPER 396
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 150/399 (37%), Gaps = 85/399 (21%)
Query: 43 LPIIGHLHLFYKERKPHKSFAELAEKLGPIFYVQLGRVPAVVVSSNELAKQVLKTHDQVF 102
LP+IG++ L + KS L++ GP+F + G P VV+ E K+ L + F
Sbjct: 19 LPVIGNI-LQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEF 77
Query: 103 ASRPNLLSAKYLSVGPAAVTFSPYGAYWRQARKLCVTELLS--------PKRVNSFKVVL 154
+ R A+ + G + FS G W++ R+ + L + RV L
Sbjct: 78 SGRGIFPLAERANRG-FGIVFS-NGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCL 135
Query: 155 DEEVNR------DLIFAFAT---DFFCLAAFGVRFLENEEKEEGQKSRYLASVFVEVEEL 205
EE+ + D F + C F RF + Q+ L E ++
Sbjct: 136 VEELRKTKASPCDPTFILGCAPCNVICSIIFHKRF-----DYKDQQFLNLMEKLNENIKI 190
Query: 206 LTGFYYGDFFSEWVWPGWLTGYTPRV--IKGTRN-LLNSV----EEIFDKTSKRKQLLDT 258
L+ S W+ ++P + GT N LL +V I +K + ++ +D
Sbjct: 191 LS--------SPWIQ--ICNNFSPIIDYFPGTHNKLLKNVAFMKSYILEKVKEHQESMD- 239
Query: 259 SALLLHGNENLIEVLRRVQKRDDLDVP--ITDDSLESIVSDMFVGGVDPSTATLEWIMTE 316
++ ++ I+ +++ + P T +SLE+ D+F G + ++ TL + +
Sbjct: 240 ----MNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLL 295
Query: 317 LARHPRESMR-----------------------------LHPVSFLI-------PRQSSD 340
L +HP + + +H V I P +
Sbjct: 296 LLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTC 355
Query: 341 KCTLEGYEIPAKTRILINNHAIGRDPKLFENPHDFIPER 379
Y IP T ILI+ ++ D K F NP F P
Sbjct: 356 DIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHH 394
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 19/127 (14%)
Query: 266 NENLIEVLRRVQKRDDLDVPITDDSLESIVSDMFVGGVDPSTATLEWIMTELARHPRES- 324
++L+ L RVQ DD D ++ D L SI + + G + S + + L HP +
Sbjct: 208 GDDLLSALIRVQ--DDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLA 265
Query: 325 -MRLHP----------VSFLIP-----RQSSDKCTLEGYEIPAKTRILINNHAIGRDPKL 368
+R P + ++ P R ++++ + G IP + +L+ N A RDPK
Sbjct: 266 LVRRDPSALPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQ 325
Query: 369 FENPHDF 375
F +PH F
Sbjct: 326 FPDPHRF 332
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 19/127 (14%)
Query: 266 NENLIEVLRRVQKRDDLDVPITDDSLESIVSDMFVGGVDPSTATLEWIMTELARHPRES- 324
++L+ L RVQ DD D ++ D L SI + + G + S + + L HP +
Sbjct: 207 GDDLLSALIRVQ--DDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLA 264
Query: 325 -MRLHP----------VSFLIP-----RQSSDKCTLEGYEIPAKTRILINNHAIGRDPKL 368
+R P + ++ P R ++++ + G IP + +L+ N A RDPK
Sbjct: 265 LVRRDPSALPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQ 324
Query: 369 FENPHDF 375
F +PH F
Sbjct: 325 FPDPHRF 331
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 19/127 (14%)
Query: 266 NENLIEVLRRVQKRDDLDVPITDDSLESIVSDMFVGGVDPSTATLEWIMTELARHPRES- 324
++L+ L RVQ DD D ++ D L SI + + G + S + + L HP +
Sbjct: 207 GDDLLSALIRVQ--DDDDGRLSADELTSIALVLLLAGFESSVSLIGIGTYLLLTHPDQLA 264
Query: 325 -MRLHP----------VSFLIP-----RQSSDKCTLEGYEIPAKTRILINNHAIGRDPKL 368
+R P + ++ P R ++++ + G IP + +L+ N A RDPK
Sbjct: 265 LVRRDPSALPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQ 324
Query: 369 FENPHDF 375
F +PH F
Sbjct: 325 FPDPHRF 331
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 19/127 (14%)
Query: 266 NENLIEVLRRVQKRDDLDVPITDDSLESIVSDMFVGGVDPSTATLEWIMTELARHPRES- 324
++L+ L RVQ DD D ++ D L SI + + G + S + + L HP +
Sbjct: 208 GDDLLSALIRVQ--DDDDGRLSADELTSIALVLLLAGFESSVSLIGIGTYLLLTHPDQLA 265
Query: 325 -MRLHP----------VSFLIP-----RQSSDKCTLEGYEIPAKTRILINNHAIGRDPKL 368
+R P + ++ P R ++++ + G IP + +L+ N A RDPK
Sbjct: 266 LVRRDPSALPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQ 325
Query: 369 FENPHDF 375
F +PH F
Sbjct: 326 FPDPHRF 332
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 19/127 (14%)
Query: 266 NENLIEVLRRVQKRDDLDVPITDDSLESIVSDMFVGGVDPSTATLEWIMTELARHPRES- 324
++L+ L RVQ DD D ++ D L SI + + G + S + + L HP +
Sbjct: 208 GDDLLSALIRVQ--DDDDGRLSADELTSIALVLLLAGFETSVSLIGIGTYLLLTHPDQLA 265
Query: 325 -MRLHP----------VSFLIP-----RQSSDKCTLEGYEIPAKTRILINNHAIGRDPKL 368
+R P + ++ P R ++++ + G IP + +L+ N A RDPK
Sbjct: 266 LVRRDPSALPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQ 325
Query: 369 FENPHDF 375
F +PH F
Sbjct: 326 FPDPHRF 332
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 17/109 (15%)
Query: 284 VPITDDSLESIVSDMFVGGVDPSTATLEWIMTELARHPR-----------------ESMR 326
+ ++D + +++ ++ + +P+ TL ++ L +P E++R
Sbjct: 252 MALSDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLADRSLVPRAIAETLR 311
Query: 327 LHPVSFLIPRQSSDKCTLEGYEIPAKTRILINNHAIGRDPKLFENPHDF 375
P LIPRQ S + G EI T + A RDP+ FE P F
Sbjct: 312 YKPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVF 360
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 322 RESMRLHPVSFLIPRQSSDKCTLEGYEIPAKTRILINNHAIGRDPKLFENPHDFIPER 379
+ES+RL+P ++ R ++ ++G +P T +L + + +GR FE+P F P+R
Sbjct: 310 KESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDR 367
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 27/129 (20%)
Query: 274 RRVQKRDDL---------DVPITDDSLESIVSDMFVGGVDPSTATLEWIMTELARHPRES 324
R+V+ DDL D + D L ++V+ + V G + + L M + A+HP +
Sbjct: 207 RKVEPGDDLTSDIVRAFHDGVLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQW 266
Query: 325 MRLHPVSFLIP------------------RQSSDKCTLEGYEIPAKTRILINNHAIGRDP 366
M++ L P R +++ + G IP T + + H RDP
Sbjct: 267 MKIKENPELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDP 326
Query: 367 KLFENPHDF 375
++F + F
Sbjct: 327 RVFADADRF 335
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 27/129 (20%)
Query: 274 RRVQKRDDL---------DVPITDDSLESIVSDMFVGGVDPSTATLEWIMTELARHPRES 324
R+V+ DDL D + D L ++V+ + V G + + L M + A+HP +
Sbjct: 217 RKVEPGDDLTSDIVRAFHDGVLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQW 276
Query: 325 MRLHPVSFLIP------------------RQSSDKCTLEGYEIPAKTRILINNHAIGRDP 366
M++ L P R +++ + G IP T + + H RDP
Sbjct: 277 MKIKENPELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDP 336
Query: 367 KLFENPHDF 375
++F + F
Sbjct: 337 RVFADADRF 345
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 53/147 (36%), Gaps = 46/147 (31%)
Query: 279 RDDLDVPI-----------TDDSLESIVSDMFVGGVDPSTATLEWIMTELARHP------ 321
RD LDV I + D + + M G S+ T W + EL RH
Sbjct: 223 RDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAV 282
Query: 322 -----------------------------RESMRLHPVSFLIPRQSSDKCTLEGYEIPAK 352
+E++RLHP ++ R + + ++G+ I
Sbjct: 283 IDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEG 342
Query: 353 TRILINNHAIGRDPKLFENPHDFIPER 379
+ + R P+ F +PHDF+P R
Sbjct: 343 DLVAASPAISNRIPEDFPDPHDFVPAR 369
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 53/147 (36%), Gaps = 46/147 (31%)
Query: 279 RDDLDVPI-----------TDDSLESIVSDMFVGGVDPSTATLEWIMTELARHP------ 321
RD LDV I + D + + M G S+ T W + EL RH
Sbjct: 223 RDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAV 282
Query: 322 -----------------------------RESMRLHPVSFLIPRQSSDKCTLEGYEIPAK 352
+E++RLHP ++ R + + ++G+ I
Sbjct: 283 IDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEG 342
Query: 353 TRILINNHAIGRDPKLFENPHDFIPER 379
+ + R P+ F +PHDF+P R
Sbjct: 343 DLVAASPAISNRIPEDFPDPHDFVPAR 369
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 53/147 (36%), Gaps = 46/147 (31%)
Query: 279 RDDLDVPI-----------TDDSLESIVSDMFVGGVDPSTATLEWIMTELARHP------ 321
RD LDV I + D + + M G S+ T W + EL RH
Sbjct: 223 RDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAV 282
Query: 322 -----------------------------RESMRLHPVSFLIPRQSSDKCTLEGYEIPAK 352
+E++RLHP ++ R + + ++G+ I
Sbjct: 283 IDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEG 342
Query: 353 TRILINNHAIGRDPKLFENPHDFIPER 379
+ + R P+ F +PHDF+P R
Sbjct: 343 DLVAASPAISNRIPEDFPDPHDFVPAR 369
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 53/147 (36%), Gaps = 46/147 (31%)
Query: 279 RDDLDVPI-----------TDDSLESIVSDMFVGGVDPSTATLEWIMTELARHP------ 321
RD LDV I + D + + M G S+ T W + EL RH
Sbjct: 223 RDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAV 282
Query: 322 -----------------------------RESMRLHPVSFLIPRQSSDKCTLEGYEIPAK 352
+E++RLHP ++ R + + ++G+ I
Sbjct: 283 IDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEG 342
Query: 353 TRILINNHAIGRDPKLFENPHDFIPER 379
+ + R P+ F +PHDF+P R
Sbjct: 343 DLVAASPAISNRIPEDFPDPHDFVPAR 369
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 19/127 (14%)
Query: 266 NENLIEVLRRVQKRDDLDVPITDDSLESIVSDMFVGGVDPSTATLEWIMTELARHPRES- 324
++L+ L VQ DD D ++ D L SI + + G + S + + L HP +
Sbjct: 207 GDDLLSALISVQ--DDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLA 264
Query: 325 -MRLHP----------VSFLIP-----RQSSDKCTLEGYEIPAKTRILINNHAIGRDPKL 368
+R P + ++ P R ++++ + G IP + +L+ N A RDP
Sbjct: 265 LVRADPSALPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPSQ 324
Query: 369 FENPHDF 375
F +PH F
Sbjct: 325 FPDPHRF 331
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 58/138 (42%), Gaps = 43/138 (31%)
Query: 277 QKRDDLDVPITDDSLESIVSDMFVGGVDPSTATLEWIMTELARHPR-------------- 322
+KR DL T +++ + +M + D + +L +++ +A+HP
Sbjct: 286 EKRGDL----TRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIG 341
Query: 323 --------------------ESMRLHPVSFLIPRQSSDKCTLEGYEIPAKTRILINNHAI 362
ESMR PV L+ R++ + ++GY + T I++N I
Sbjct: 342 ERDIKIDDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVIDGYPVKKGTNIILN---I 398
Query: 363 GRDPKL--FENPHDFIPE 378
GR +L F P++F E
Sbjct: 399 GRMHRLEFFPKPNEFTLE 416
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 72/176 (40%), Gaps = 29/176 (16%)
Query: 213 DFFSEWVWPG-WLTGYTPRVIKGTRNL--------LNSVEEIFDKTSKRKQLLDTSALLL 263
D F E + G WL Y +I R L +VEE D+ ++ + + + LL+
Sbjct: 196 DLFDEQMKAGMWLRDYLRALIDERRRTPGEDLMSGLVAVEESGDQLTEDEIIATCNLLLI 255
Query: 264 HGNENLIEVLRRVQKRDDLDVPITDDSLESIVSDMFVGGVDPSTATLEWIMTELARHPRE 323
G+E + ++ L + T ++ +D ++A +E E
Sbjct: 256 AGHETTVNLIANAA----LAMLRTPGQWAALAADG-----SRASAVIE-----------E 295
Query: 324 SMRLHPVSFLIPRQSSDKCTLEGYEIPAKTRILINNHAIGRDPKLFENPHDFIPER 379
+MR P L+ R + D T+ + +P +L+ A RDP + P F P+R
Sbjct: 296 TMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDR 351
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 75/171 (43%), Gaps = 26/171 (15%)
Query: 231 VIKGTRNLLNSVEEIFDKTSKRKQLLDTSALLLHGNENLIEVLRRVQKRDDLDVPITDDS 290
+I T + +E+FD + R+ + +L++ +E LI R+ D + +TDD
Sbjct: 183 LIDLTNHAFGGEDELFDGMTPRQA---HTEILVYFDE-LITARRKEPGDDLVSTLVTDDD 238
Query: 291 L--ESIV---SDMFVGGVDPSTATLEWIMTELARHP-----------------RESMRLH 328
L + ++ ++ +GG + + + + LA P E +R
Sbjct: 239 LTIDDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTALRDGSADVDTVVEEVLRWT 298
Query: 329 PVSFLIPRQSSDKCTLEGYEIPAKTRILINNHAIGRDPKLFENPHDFIPER 379
+ + R ++ T+ G ++P+ T ++ A RDP F++P F+P R
Sbjct: 299 SPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGR 349
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 81/216 (37%), Gaps = 49/216 (22%)
Query: 201 EVEELLTGFYYGDFFSEWVWPGWLTGYTPRVIKGTRNLLNSVEEIFDKT-SKRKQLLDTS 259
+V +L G + W+ PGWL P + R +++IF K KR+Q +
Sbjct: 174 KVAQLYADLDGGFSHAAWLLPGWLP--LPSFRRRDR-AHREIKDIFYKAIQKRRQSQEKI 230
Query: 260 ALLLHGNENLIEVLRRVQKRDDLDVPITDDSLESIVSDMFVGGVDPSTATLEWIMTELAR 319
+++++ L +D P+TDD + ++ + + G S+ T W+ LAR
Sbjct: 231 -------DDILQTLLDATYKDGR--PLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLAR 281
Query: 320 HP------------------------------------RESMRLHPVSFLIPRQSSDKCT 343
+E++RL P ++ R + T
Sbjct: 282 DKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQT 341
Query: 344 LEGYEIPAKTRILINNHAIGRDPKLFENPHDFIPER 379
+ GY IP ++ ++ R + DF P+R
Sbjct: 342 VAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDR 377
>pdb|3OFU|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|D Chain D, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|E Chain E, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|F Chain F, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
Length = 396
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 285 PITDDSLESIVSDMFVGGVDPSTATLEWIMTELARHPRESMRLHPVSFLIPRQSSD 340
P T D + ++ GG+D A + + LARHP + L LIP + +
Sbjct: 218 PWTVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPDLIPAAADE 273
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 323 ESMRLHPVSFL-IPRQSSDKCTLEGYEIPAKTRILINNHAIGRDPKLFENPHDF 375
E R H S L I R + + + + A I+ +N + RD ++FENP +F
Sbjct: 277 ELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF 330
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 323 ESMRLHPVSFL-IPRQSSDKCTLEGYEIPAKTRILINNHAIGRDPKLFENPHDF 375
E R H S L I R + + + + A I+ +N + RD ++FENP +F
Sbjct: 277 ELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF 330
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 323 ESMRLHPVSFL-IPRQSSDKCTLEGYEIPAKTRILINNHAIGRDPKLFENPHDF 375
E R H S L I R + + + + A I+ +N + RD ++FENP +F
Sbjct: 278 ELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF 331
>pdb|1F26|A Chain A, Crystal Structure Of No Complex Of Thr243val Mutants Of
Cytochrome P450nor
Length = 402
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 323 ESMRLHPVSFL-IPRQSSDKCTLEGYEIPAKTRILINNHAIGRDPKLFENPHDF 375
E R H S L I R + + + + A I+ +N + RD ++FENP +F
Sbjct: 277 ELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF 330
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 323 ESMRLHPVSFL-IPRQSSDKCTLEGYEIPAKTRILINNHAIGRDPKLFENPHDF 375
E R H S L I R + + + + A I+ +N + RD ++FENP +F
Sbjct: 279 ELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF 332
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 348 EIPAKTRILINNHAIGRDPKLFENPHDFIPER 379
E T +L++ + DP+L+++P +F PER
Sbjct: 307 EFKKGTSVLLDLYGTNHDPRLWDHPDEFRPER 338
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 323 ESMRLHPVSFL-IPRQSSDKCTLEGYEIPAKTRILINNHAIGRDPKLFENPHDF 375
E R H S L I R + + + + A I+ +N + RD ++FENP +F
Sbjct: 277 ELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF 330
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 323 ESMRLHPVSFL-IPRQSSDKCTLEGYEIPAKTRILINNHAIGRDPKLFENPHDF 375
E R H S L I R + + + + A I+ +N + RD ++FENP +F
Sbjct: 278 ELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF 331
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 323 ESMRLHPVSFL-IPRQSSDKCTLEGYEIPAKTRILINNHAIGRDPKLFENPHDF 375
E R H S L I R + + + + A I+ +N + RD ++FENP +F
Sbjct: 277 ELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF 330
>pdb|4EK1|A Chain A, Crystal Structure Of Electron-Spin Labeled Cytochrome
P450cam
pdb|4EK1|B Chain B, Crystal Structure Of Electron-Spin Labeled Cytochrome
P450cam
Length = 414
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 285 PITDDSLESIVSDMFVGGVDPSTATLEWIMTELARHPRESMRLHPVSFLIPRQSSDKCTL 344
PIT D + + + VGG+D L + M LA+ P L IP S + L
Sbjct: 232 PITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPERIPAASEE--LL 289
Query: 345 EGYEIPAKTRILINNH 360
+ + A RIL +++
Sbjct: 290 RRFSLVADGRILTSDY 305
>pdb|2QX2|A Chain A, Structure Of The C-Terminal Domain Of Sex Pheromone
Staph-Cam373 Precursor From Staphylococcus Aureus
Length = 344
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 15/90 (16%)
Query: 256 LDTSALLLHGNENLIEVLRRVQKRDDL-DVPI-----TDDSLESIVSDMFVGGVDPSTAT 309
LD S + G + E+L R+++ DDL D+PI S +SI F+ + AT
Sbjct: 157 LDDSEVKKQGKQXASEILSRLRENDDLKDIPIHFAIYKQSSEDSITPGEFI-----TQAT 211
Query: 310 LEWIMTELARHPRESMRLHPVSFLIPRQSS 339
E T+L E ++ S L+P ++
Sbjct: 212 AEKSQTKL----NEWHNINEKSALLPSSTA 237
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 27/57 (47%)
Query: 323 ESMRLHPVSFLIPRQSSDKCTLEGYEIPAKTRILINNHAIGRDPKLFENPHDFIPER 379
E +R VS I R + + + G I A +L++ + RD K +ENP F R
Sbjct: 282 ELLRFTSVSDHIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARR 338
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 323 ESMRLH-PVSFLIPRQSSDKCTLEGYEIPAKTRILINNHAIGRDPKLFENPHDF 375
E R H V+ I R + + + + A I+ +N + RD ++FENP +F
Sbjct: 278 ELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF 331
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 323 ESMRLH-PVSFLIPRQSSDKCTLEGYEIPAKTRILINNHAIGRDPKLFENPHDF 375
E R H V+ I R + + + + A I+ +N + RD ++FENP +F
Sbjct: 277 ELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF 330
>pdb|2H7R|A Chain A, L244a Mutant Of Cytochrome P450cam Complexed With
Imidazole
pdb|2H7S|A Chain A, L244a Mutant Of Cytochrome P450cam
pdb|2H7S|C Chain C, L244a Mutant Of Cytochrome P450cam
Length = 414
Score = 28.5 bits (62), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 285 PITDDSLESIVSDMFVGGVDPSTATLEWIMTELARHPRESMRLHPVSFLIPRQSSDKCTL 344
PIT D + + + VGG+D L + M LA+ P L IP + L
Sbjct: 232 PITSDEAKRMCGALLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPERIPAACEE--LL 289
Query: 345 EGYEIPAKTRILINNH 360
+ + A RIL +++
Sbjct: 290 RRFSLVADGRILTSDY 305
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 28.5 bits (62), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 323 ESMRLHPVSFL-IPRQSSDKCTLEGYEIPAKTRILINNHAIGRDPKLFENPHDF 375
E R H + L I R + + + + A I+ +N + RD ++FENP +F
Sbjct: 277 ELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF 330
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 28.1 bits (61), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 323 ESMRLHPVSFL-IPRQSSDKCTLEGYEIPAKTRILINNHAIGRDPKLFENPHDF 375
E R H + L I R + + + + A I+ +N + RD ++FENP +F
Sbjct: 278 ELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF 331
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,448,335
Number of Sequences: 62578
Number of extensions: 465165
Number of successful extensions: 1208
Number of sequences better than 100.0: 93
Number of HSP's better than 100.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 1101
Number of HSP's gapped (non-prelim): 140
length of query: 470
length of database: 14,973,337
effective HSP length: 102
effective length of query: 368
effective length of database: 8,590,381
effective search space: 3161260208
effective search space used: 3161260208
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)