Your job contains 1 sequence.
>045279
MHLEDEHVKRRRQTDHDLPSTSSSTSSSSEEEDGVSTSEDAVYGEKVEPEFDLMKSMLRD
SYSESKITRRKSEEKNIEFEVMPRKIDLVNAKSREVEMKKEESVKGGMGLGAEELKGKEG
PRFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIAN
ETGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREM
ERRIVTQLMTCMDESHRLVQPGDQKSKSDASDSKPGYVLVIGATNRPDAVDPALRRPGRF
DREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVGADLAALANKAGNLAM
KRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMERLTITMTDFEEATKMVQPSSRREGF
SAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIA
KAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGK
EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD
ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSGADLAAMMNEAAMAALEDKLISSKSS
SDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETFKAA
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 045279
(702 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2084163 - symbol:CDC48C "cell division cycle 4... 1904 1.3e-196 1
UNIPROTKB|E1BT72 - symbol:NVL "Uncharacterized protein" s... 694 2.4e-127 2
UNIPROTKB|J9P5D7 - symbol:NVL "Uncharacterized protein" s... 676 2.4e-126 3
ZFIN|ZDB-GENE-040426-2871 - symbol:nvl "nuclear VCP-like"... 1239 3.7e-126 1
RGD|1311270 - symbol:Nvl "nuclear VCP-like" species:10116... 1227 7.0e-125 1
UNIPROTKB|H0Y8B6 - symbol:NVL "Nuclear valosin-containing... 1205 1.7e-124 2
UNIPROTKB|O15381 - symbol:NVL "Nuclear valosin-containing... 1203 2.7e-124 2
SGD|S000003957 - symbol:RIX7 "Putative ATPase of the AAA ... 644 3.1e-124 3
CGD|CAL0000102 - symbol:RIX7 species:5476 "Candida albica... 700 1.2e-123 2
UNIPROTKB|Q5AGG2 - symbol:RIX7 "Putative uncharacterized ... 700 1.2e-123 2
POMBASE|SPBC16E9.10c - symbol:SPBC16E9.10c "AAA family AT... 1210 4.4e-123 1
MGI|MGI:1914709 - symbol:Nvl "nuclear VCP-like" species:1... 1210 4.4e-123 1
UNIPROTKB|E2QY79 - symbol:NVL "Uncharacterized protein" s... 1181 5.8e-122 2
UNIPROTKB|F1MIM8 - symbol:NVL "Uncharacterized protein" s... 1182 4.1e-120 1
ASPGD|ASPL0000062283 - symbol:AN1366 species:162425 "Emer... 1150 1.0e-116 1
TAIR|locus:2085064 - symbol:CDC48 "cell division cycle 48... 792 1.8e-114 2
TAIR|locus:2101933 - symbol:AtCDC48B "AT3G53230" species:... 784 1.3e-113 2
TAIR|locus:2831844 - symbol:AtCDC48C "cell division cycle... 784 1.3e-113 2
ZFIN|ZDB-GENE-030131-5408 - symbol:vcp "valosin containin... 781 2.6e-113 2
DICTYBASE|DDB_G0288065 - symbol:cdcD "CDC48 family AAA AT... 754 2.3e-112 2
FB|FBgn0016983 - symbol:smid "smallminded" species:7227 "... 670 4.2e-112 2
UNIPROTKB|G3X757 - symbol:VCP "Transitional endoplasmic r... 771 4.9e-112 2
UNIPROTKB|Q3ZBT1 - symbol:VCP "Transitional endoplasmic r... 771 4.9e-112 2
UNIPROTKB|E2RLQ9 - symbol:VCP "Uncharacterized protein" s... 771 4.9e-112 2
UNIPROTKB|P55072 - symbol:VCP "Transitional endoplasmic r... 771 4.9e-112 2
MGI|MGI:99919 - symbol:Vcp "valosin containing protein" s... 771 4.9e-112 2
RGD|621595 - symbol:Vcp "valosin-containing protein" spec... 771 4.9e-112 2
UNIPROTKB|Q6GL04 - symbol:vcp "Transitional endoplasmic r... 770 6.2e-112 2
UNIPROTKB|P03974 - symbol:VCP "Transitional endoplasmic r... 769 7.9e-112 2
UNIPROTKB|P23787 - symbol:vcp "Transitional endoplasmic r... 766 1.6e-111 2
GENEDB_PFALCIPARUM|PFF0940c - symbol:PFF0940c "cell divis... 745 2.8e-111 3
UNIPROTKB|C6KT34 - symbol:PFF0940c "Cell division cycle p... 745 2.8e-111 3
ZFIN|ZDB-GENE-060312-22 - symbol:zgc:136908 "zgc:136908" ... 758 1.5e-110 2
UNIPROTKB|F1SIH8 - symbol:VCP "Transitional endoplasmic r... 752 4.9e-110 2
CGD|CAL0000732 - symbol:CDC48 species:5476 "Candida albic... 699 2.2e-109 3
UNIPROTKB|Q59WG3 - symbol:CDC48 "Putative uncharacterized... 699 2.2e-109 3
FB|FBgn0261014 - symbol:TER94 "TER94" species:7227 "Droso... 739 3.1e-108 2
WB|WBGene00007352 - symbol:cdc-48.1 species:6239 "Caenorh... 732 1.0e-107 2
UNIPROTKB|P54811 - symbol:cdc-48.1 "Transitional endoplas... 732 1.0e-107 2
WB|WBGene00008053 - symbol:cdc-48.2 species:6239 "Caenorh... 726 2.7e-107 2
UNIPROTKB|P54812 - symbol:cdc-48.2 "Transitional endoplas... 726 2.7e-107 2
UNIPROTKB|G4N517 - symbol:MGG_05193 "Cell division contro... 720 5.1e-106 2
POMBASE|SPAC1565.08 - symbol:cdc48 "AAA family ATPase Cdc... 720 1.1e-105 2
ASPGD|ASPL0000069340 - symbol:AN7254 species:162425 "Emer... 719 1.1e-105 2
UNIPROTKB|E7ERY0 - symbol:NVL "Nuclear valosin-containing... 1046 1.1e-105 1
SGD|S000002284 - symbol:CDC48 "AAA ATPase involved in mul... 704 3.2e-104 2
GENEDB_PFALCIPARUM|PF07_0047 - symbol:PF07_0047 "cell div... 578 3.7e-101 4
UNIPROTKB|P46468 - symbol:PF07_0047 "Putative cell divisi... 578 3.7e-101 4
UNIPROTKB|E1BTS8 - symbol:LOC426240 "Uncharacterized prot... 770 2.5e-100 2
UNIPROTKB|E2RC37 - symbol:SPATA5 "Uncharacterized protein... 578 3.9e-98 2
UNIPROTKB|Q8NB90 - symbol:SPATA5 "Spermatogenesis-associa... 582 1.5e-97 2
MGI|MGI:1927170 - symbol:Spata5 "spermatogenesis associat... 581 2.5e-97 2
UNIPROTKB|F8W938 - symbol:NVL "Nuclear valosin-containing... 959 1.8e-96 1
DICTYBASE|DDB_G0278435 - symbol:DDB_G0278435 "AAA ATPase ... 942 1.1e-94 1
DICTYBASE|DDB_G0282181 - symbol:nvl "valosin-containing p... 929 2.7e-93 1
UNIPROTKB|H9KYT1 - symbol:LOC430766 "Uncharacterized prot... 766 6.2e-93 2
UNIPROTKB|F1RQN5 - symbol:SPATA5 "Uncharacterized protein... 498 1.1e-90 2
TAIR|locus:2103555 - symbol:CIP111 "Cam interacting prote... 553 1.1e-90 3
UNIPROTKB|F1MFP1 - symbol:SPATA5 "Uncharacterized protein... 496 1.6e-90 2
POMBASE|SPBC56F2.07c - symbol:SPBC56F2.07c "ribosome biog... 509 6.5e-90 4
RGD|1310478 - symbol:Spata5 "spermatogenesis associated 5... 488 8.6e-90 3
UNIPROTKB|G4ML45 - symbol:MGG_06686 "Uncharacterized prot... 893 1.7e-89 1
SGD|S000004389 - symbol:AFG2 "ATPase of the CDC48/PAS1/SE... 521 1.5e-88 2
CGD|CAL0002187 - symbol:orf19.6432 species:5476 "Candida ... 525 8.2e-83 2
WB|WBGene00003119 - symbol:mac-1 species:6239 "Caenorhabd... 816 2.5e-81 1
UNIPROTKB|Q9NAG4 - symbol:mac-1 "Protein MAC-1" species:6... 816 2.5e-81 1
TAIR|locus:2044209 - symbol:CDC48B "cell division cycle 4... 481 1.7e-80 2
UNIPROTKB|F1P4V8 - symbol:LOC426240 "Uncharacterized prot... 770 1.9e-76 1
UNIPROTKB|A7YSY2 - symbol:SPATA5L1 "Spermatogenesis-assoc... 382 6.9e-74 3
UNIPROTKB|F1NG80 - symbol:SPATA5L1 "Uncharacterized prote... 397 1.7e-72 3
RGD|1595990 - symbol:Spata5l1 "spermatogenesis associated... 381 2.1e-72 3
GENEDB_PFALCIPARUM|PF14_0126 - symbol:PF14_0126 "hypothet... 497 3.4e-72 6
UNIPROTKB|Q8ILW7 - symbol:PF14_0126 "AAA family ATPase, p... 497 3.4e-72 6
UNIPROTKB|F1NLN4 - symbol:SPATA5 "Uncharacterized protein... 411 8.1e-72 2
UNIPROTKB|F1NYD5 - symbol:PEX6 "Uncharacterized protein" ... 621 5.3e-71 2
DICTYBASE|DDB_G0282241 - symbol:DDB_G0282241 species:4468... 454 6.8e-71 2
UNIPROTKB|Q60HE0 - symbol:PEX6 "Peroxin Pex6p" species:95... 568 1.6e-69 2
FB|FBgn0032450 - symbol:CG5776 species:7227 "Drosophila m... 510 5.4e-68 2
UNIPROTKB|Q13608 - symbol:PEX6 "Peroxisome assembly facto... 575 5.6e-68 2
UNIPROTKB|E2RDF7 - symbol:PEX6 "Uncharacterized protein" ... 581 4.6e-67 2
ZFIN|ZDB-GENE-081104-252 - symbol:pex6 "peroxisomal bioge... 613 1.5e-66 2
UNIPROTKB|A5GFQ7 - symbol:PEX6 "Peroxisomal biogenesis fa... 570 1.4e-65 2
MGI|MGI:2385054 - symbol:Pex6 "peroxisomal biogenesis fac... 573 3.2e-65 2
UNIPROTKB|E1B8F6 - symbol:PEX6 "Uncharacterized protein" ... 567 3.4e-65 2
UNIPROTKB|Q9BVQ7 - symbol:SPATA5L1 "Spermatogenesis-assoc... 342 3.7e-64 3
RGD|621637 - symbol:Pex6 "peroxisomal biogenesis factor 6... 564 5.0e-64 2
UNIPROTKB|P54777 - symbol:Pex6 "Peroxisome assembly facto... 564 5.0e-64 2
WB|WBGene00010562 - symbol:cdc-48.3 species:6239 "Caenorh... 572 6.2e-64 3
SGD|S000005273 - symbol:PEX6 "AAA-peroxin" species:4932 "... 585 7.1e-63 3
UNIPROTKB|F1SN45 - symbol:SPATA5L1 "Uncharacterized prote... 339 7.8e-63 3
GENEDB_PFALCIPARUM|MAL8P1.92 - symbol:MAL8P1.92 "ATPase, ... 511 1.3e-62 3
UNIPROTKB|F6UUI0 - symbol:SPATA5L1 "Uncharacterized prote... 339 2.7e-62 3
TAIR|locus:2007574 - symbol:PEX6 "peroxin 6" species:3702... 638 4.2e-62 1
UNIPROTKB|E2QSC5 - symbol:SPATA5L1 "Uncharacterized prote... 339 7.5e-62 3
ZFIN|ZDB-GENE-060929-204 - symbol:spata5l1 "spermatogenes... 359 3.2e-61 3
UNIPROTKB|E9PE75 - symbol:PEX1 "Peroxisome biogenesis fac... 505 1.3e-60 4
UNIPROTKB|O43933 - symbol:PEX1 "Peroxisome biogenesis fac... 505 2.7e-59 4
POMBASE|SPAC17A5.01 - symbol:pex6 "peroxin-6 (predicted)"... 509 2.3e-58 3
UNIPROTKB|E1BPU3 - symbol:PEX1 "Uncharacterized protein" ... 508 3.9e-58 3
TAIR|locus:2159557 - symbol:PEX1 "peroxisome 1" species:3... 514 2.6e-57 2
WARNING: Descriptions of 634 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2084163 [details] [associations]
symbol:CDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016571 "histone
methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
evidence=RCA] [GO:0030422 "production of siRNA involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC009325 GO:GO:0009524
EMBL:AY136443 EMBL:BT002135 IPI:IPI00547846 RefSeq:NP_186810.2
UniGene:At.27731 UniGene:At.63552 ProteinModelPortal:Q9SS94
SMR:Q9SS94 IntAct:Q9SS94 PaxDb:Q9SS94 PRIDE:Q9SS94
EnsemblPlants:AT3G01610.1 GeneID:821105 KEGG:ath:AT3G01610
GeneFarm:1903 TAIR:At3g01610 InParanoid:Q9SS94 KO:K14571
OMA:REGFTTI PhylomeDB:Q9SS94 ProtClustDB:CLSN2720022
Genevestigator:Q9SS94 GermOnline:AT3G01610 Uniprot:Q9SS94
Length = 820
Score = 1904 (675.3 bits), Expect = 1.3e-196, P = 1.3e-196
Identities = 394/667 (59%), Positives = 474/667 (71%)
Query: 41 AVYGEKVEP-EFDLMKSMLRDSYSESKITRRKS----EEKNIEFEVMPRK--IDLVNAKS 93
AVYGEK+ P FDL+ LRD+Y++ + +K EKN+E E + K L +
Sbjct: 144 AVYGEKLSPPRFDLINDSLRDNYAKLNSSSKKPIGSPAEKNVEVETVSNKGRSKLATMGA 203
Query: 94 REVEMKKEESVXXXXXXXXXXXXXXXXPRFQDLGGMESVLEELKMEVIVPLYHPQLPQWL 153
R+ E K S+ P F+D GG++ +L+EL+M V+ P+ +P+ + +
Sbjct: 204 RK-EAKVSLSLSGATGNGDLEVEGTKGPTFKDFGGIKKILDELEMNVLFPILNPEPFKKI 262
Query: 154 GVRPMAGILLYGPPGCGKTKLAHAIANETGVPFYKISATEVVSGVSGASEENIRDLFSKA 213
GV+P +GIL +GPPGCGKTKLA+AIANE GVPFYKISATEV+SGVSGASEENIR+LFSKA
Sbjct: 263 GVKPPSGILFHGPPGCGKTKLANAIANEAGVPFYKISATEVISGVSGASEENIRELFSKA 322
Query: 214 YRTAPSIVFIDEIDAIASKRENLQREMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXX 273
YRTAPSIVFIDEIDAI SKREN QREME+RIVTQL+TCMD PG
Sbjct: 323 YRTAPSIVFIDEIDAIGSKRENQQREMEKRIVTQLLTCMDG------PGNKGDKNAPDSS 376
Query: 274 XPGYVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDL 333
G+VLVIGATNRPDA+DPALRR GRF+ EI L PDE+AR +ILSV+ + LR+EG FD
Sbjct: 377 A-GFVLVIGATNRPDALDPALRRSGRFETEIALTAPDEDARAEILSVVAQKLRLEGPFDK 435
Query: 334 VKIARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEE 393
+IAR TPGFV +KRI+D RKSE SG+ + W R PW EE
Sbjct: 436 KRIARLTPGFVGADLESVAYLAGRKAIKRILDSRKSEQSGDG---EDDKSWLRMPWPEEE 492
Query: 394 MERLTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPE 453
+E+L + M+DFEEA +VQ S REGFS +P+VKW+DVGGLD+LR +F+RYIVR IK P+
Sbjct: 493 LEKLFVKMSDFEEAVNLVQASLTREGFSIVPDVKWDDVGGLDHLRLQFNRYIVRPIKKPD 552
Query: 454 EYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRT 513
Y+ FGVDLETGFLLYGPPGCGKTLIAKA ANEAGANF+HIKG ELLNKYVGESELA+RT
Sbjct: 553 IYKAFGVDLETGFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLNKYVGESELAIRT 612
Query: 514 LFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
LF RARTC+PC++FFDEVDALTT RGKEG WVVERLLNQ L+ELDG ++R V+VIGATN
Sbjct: 613 LFQRARTCAPCVIFFDEVDALTTSRGKEGAWVVERLLNQFLVELDGGERRN-VYVIGATN 671
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENL 633
RPDV+D A LRPGRFG LLYVPLP DER IL+A+ARKKPID SVDL IA++ CE
Sbjct: 672 RPDVVDPAFLRPGRFGNLLYVPLPNADERASILKAIARKKPIDPSVDLDGIAKNN-CEGF 730
Query: 634 SGXXXXXXXXXXXXXXXXXKLISSKSS----SDVTPFTIKLTHFEQALSKISPSVSELQI 689
SG + SS+SS +D+T TIK HFEQALS +SPSV++ Q
Sbjct: 731 SGADLAHLVQKATFQAVEEMIGSSESSEDDVTDITQCTIKTRHFEQALSLVSPSVNKQQR 790
Query: 690 QRYKTLS 696
+ Y LS
Sbjct: 791 RHYDALS 797
>UNIPROTKB|E1BT72 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730
GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AADN02012163 IPI:IPI00584236
Ensembl:ENSGALT00000015173 ArrayExpress:E1BT72 Uniprot:E1BT72
Length = 858
Score = 694 (249.4 bits), Expect = 2.4e-127, Sum P(2) = 2.4e-127
Identities = 144/320 (45%), Positives = 203/320 (63%)
Query: 386 RQPWLPEE-MERLTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRY 444
+Q LPE+ +++L I M DF A VQPS++REGF IP+V W D+G L+ +R E
Sbjct: 537 KQDPLPEDQLQKLCIEMNDFIVALSSVQPSAKREGFVTIPDVTWADIGALEDVREELTMA 596
Query: 445 IVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYV 504
I+ ++ PE+++ G+ G LL GPPGCGKTL+AKAVANE+G NFI +KGPELLN YV
Sbjct: 597 ILAPVRNPEQFKALGLTTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYV 656
Query: 505 GESELAVRTLFSRARTCSPCILFFDEVDALTTKRG-KEGGWVVERLLNQLLIELDGADKR 563
GESE AVR +F RAR +PC++FFDEVDAL +R +E G V R++NQLL E+DG + R
Sbjct: 657 GESERAVRQVFQRARNSAPCVIFFDEVDALCPRRSDRESGASV-RVVNQLLTEMDGLENR 715
Query: 564 KGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALAR---KKPIDDSVD 620
+ VF++ ATNRPD++D A+LRPGR K LYV LP P++R IL+ + + + P+D V+
Sbjct: 716 QQVFIMAATNRPDIIDPAILRPGRLDKTLYVGLPPPEDRLAILKTITKDGTRPPLDTDVN 775
Query: 621 LHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLI--SSKSSSDVTPFTIKLTHFEQALS 678
L IA S+ C+ +G ++ ++KS + I HFE+A
Sbjct: 776 LEEIAYSQQCDCYTGADLSALVREASICALRQEMALPTTKSKKEKGEIKISRKHFEEAFR 835
Query: 679 KISPSVSELQIQRYKTLSET 698
K+ SVS+ Y+ L ++
Sbjct: 836 KVKSSVSKKDQIMYEELRQS 855
Score = 577 (208.2 bits), Expect = 2.4e-127, Sum P(2) = 2.4e-127
Identities = 134/322 (41%), Positives = 188/322 (58%)
Query: 72 SEEKNIEFEVMPRKIDLVNAKSREVEMKKE--------ESVXXXXXXXXXXXXXXX-XPR 122
SE+K+ EF V+ + + K + + KKE ES+ +
Sbjct: 201 SEQKSTEFSVL--ESEKKKTKGKRAKRKKEFPDVDEEIESILLKGKVKSKGPELYHPSVK 258
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
F+D+GG + L+E+ ++++ + HP++ LGV P G LL+GPPGCGKT LA AIA E
Sbjct: 259 FEDVGGNDETLKEI-CKMLIHVRHPEVYLHLGVVPPRGFLLHGPPGCGKTLLAQAIAGEL 317
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
+P K++ATE+VSGVSG SE+ +R+LF +A AP ++FIDEIDAI KRE ++MER
Sbjct: 318 ELPMLKVAATEMVSGVSGESEQKLRELFDQAVLNAPCVLFIDEIDAITPKREVASKDMER 377
Query: 243 RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDR 302
RIV QL+TC+D+ + + VLVIGATNRPD++DPALRR GRFDR
Sbjct: 378 RIVAQLLTCLDDLNNVA--------------ATAQVLVIGATNRPDSLDPALRRAGRFDR 423
Query: 303 EIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXXMKR 362
EI LG+PDE AR +IL L R L++ GSFD + +A TPG+V + R
Sbjct: 424 EICLGIPDEAAREKILQTLCRKLKLPGSFDFLHLAHLTPGYVGADLMALCREAAMCTVNR 483
Query: 363 II-----DQRKSELSGNSIAEQ 379
++ QRK +G + AE+
Sbjct: 484 VLIKSEEQQRKYVQAGGNTAEE 505
Score = 369 (135.0 bits), Expect = 4.5e-30, Sum P(2) = 4.5e-30
Identities = 85/203 (41%), Positives = 119/203 (58%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+VK+EDVGG D E + ++ ++ PE Y GV GFLL+GPPGCGKTL+A+A+
Sbjct: 255 PSVKFEDVGGNDETLKEICKMLIH-VRHPEVYLHLGVVPPRGFLLHGPPGCGKTLLAQAI 313
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGG 543
A E + + E+++ GESE +R LF +A +PC+LF DE+DA+T KR
Sbjct: 314 AGELELPMLKVAATEMVSGVSGESEQKLRELFDQAVLNAPCVLFIDEIDAITPKREVASK 373
Query: 544 WVVERLLNQLLIELDGADKRKG---VFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
+ R++ QLL LD + V VIGATNRPD +D A+ R GRF + + + +P
Sbjct: 374 DMERRIVAQLLTCLDDLNNVAATAQVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEA 433
Query: 601 ERGLILEALARKKPIDDSVD-LH 622
R IL+ L RK + S D LH
Sbjct: 434 AREKILQTLCRKLKLPGSFDFLH 456
Score = 287 (106.1 bits), Expect = 6.9e-30, Sum P(2) = 6.9e-30
Identities = 54/129 (41%), Positives = 84/129 (65%)
Query: 125 DLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGV 184
D+G +E V EEL M ++ P+ +P+ + LG+ AG+LL GPPGCGKT LA A+ANE+G+
Sbjct: 582 DIGALEDVREELTMAILAPVRNPEQFKALGLTTPAGVLLAGPPGCGKTLLAKAVANESGL 641
Query: 185 PFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRI 244
F + E+++ G SE +R +F +A +AP ++F DE+DA+ +R + + R+
Sbjct: 642 NFISVKGPELLNMYVGESERAVRQVFQRARNSAPCVIFFDEVDALCPRRSDRESGASVRV 701
Query: 245 VTQLMTCMD 253
V QL+T MD
Sbjct: 702 VNQLLTEMD 710
Score = 125 (49.1 bits), Expect = 6.9e-30, Sum P(2) = 6.9e-30
Identities = 21/47 (44%), Positives = 33/47 (70%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRN 324
V ++ ATNRPD +DPA+ RPGR D+ + +G+P R+ IL +T++
Sbjct: 718 VFIMAATNRPDIIDPAILRPGRLDKTLYVGLPPPEDRLAILKTITKD 764
Score = 37 (18.1 bits), Expect = 2.3e-70, Sum P(2) = 2.3e-70
Identities = 5/20 (25%), Positives = 13/20 (65%)
Query: 365 DQRKSELSGNSIAEQHSDDW 384
+ +++E +G+S + DD+
Sbjct: 90 EHKRNETTGSSTEDSEDDDY 109
>UNIPROTKB|J9P5D7 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AAEX03005293 EMBL:AAEX03005294 EMBL:AAEX03005295
EMBL:AAEX03005296 Ensembl:ENSCAFT00000049264 Uniprot:J9P5D7
Length = 855
Score = 676 (243.0 bits), Expect = 2.4e-126, Sum P(3) = 2.4e-126
Identities = 136/317 (42%), Positives = 194/317 (61%)
Query: 386 RQPWLPEEMERLTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYI 445
+ P E+++ L I DF A VQPS++REGF +P+V W D+G L+ +R E I
Sbjct: 537 QDPLSEEQLQGLCIEWNDFTVALSSVQPSAKREGFVTVPSVTWADIGALEDIREELTMAI 596
Query: 446 VRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVG 505
+ ++ PE++ G+ G LL GPPGCGKTL+AKAVANE+G NFI +KGPELLN YVG
Sbjct: 597 LAPVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVG 656
Query: 506 ESELAVRTLFSRARTCSPCILFFDEVDALTTKRG-KEGGWVVERLLNQLLIELDGADKRK 564
ESE AVR +F RAR+ +PC++FFDEVDAL +R +E G V R++NQLL E+DG + R+
Sbjct: 657 ESERAVRQVFQRARSSAPCVIFFDEVDALCPRRSDRETGASV-RVVNQLLTEMDGLEARQ 715
Query: 565 GVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALAR---KKPIDDSVDL 621
VF++ ATNRPD++D A+LRPGR K L+V LP P +R IL+ + + + P+D V+L
Sbjct: 716 QVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTRPPLDADVNL 775
Query: 622 HTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKIS 681
+A C+ SG +++ K D + HFE+A K+
Sbjct: 776 EALAADLRCDCYSGADLSALVREASICALRQEMMRPKGGGDRGELKVSQKHFEEAFKKVK 835
Query: 682 PSVSELQIQRYKTLSET 698
S+S+ Y+ L ++
Sbjct: 836 SSISKKDQVMYEALRQS 852
Score = 561 (202.5 bits), Expect = 2.4e-126, Sum P(3) = 2.4e-126
Identities = 115/223 (51%), Positives = 153/223 (68%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
+F+D+GG ++ L+E+ ++++ + HP++ LG P G+LL+GPPGCGKT LAHAIA E
Sbjct: 257 KFEDVGGNDATLKEV-CKMLIHMRHPEVYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAGE 315
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREME 241
+P K++ATEVVSGVSG SE+ +R+LF +A AP ++FIDEIDAI KRE ++ME
Sbjct: 316 LDLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEIDAITPKREVASKDME 375
Query: 242 RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFD 301
RRIV QL+TCMD+ + VLVIGATNRPD++DPALRR GRFD
Sbjct: 376 RRIVAQLLTCMDDLN--------------TTAATARVLVIGATNRPDSLDPALRRAGRFD 421
Query: 302 REIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFV 344
REI LG+PDE +R +IL L R LR+ +F +A TPGFV
Sbjct: 422 REICLGIPDEASRERILQTLCRKLRLPETFPFRHLAHLTPGFV 464
Score = 346 (126.9 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 80/224 (35%), Positives = 123/224 (54%)
Query: 406 EATKMVQPSSRREGFSA-IPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLET 464
E ++ ++ +G + VK+EDVGG D E + ++ ++ PE Y G
Sbjct: 235 EIEGVLHKKAKAKGLELQVSRVKFEDVGGNDATLKEVCKMLIH-MRHPEVYHHLGAVPPR 293
Query: 465 GFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPC 524
G LL+GPPGCGKTL+A A+A E + + E+++ GESE +R LF +A + +PC
Sbjct: 294 GVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPC 353
Query: 525 ILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKG---VFVIGATNRPDVMDRA 581
+LF DE+DA+T KR + R++ QLL +D + V VIGATNRPD +D A
Sbjct: 354 VLFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPA 413
Query: 582 VLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
+ R GRF + + + +P R IL+ L RK + ++ +A
Sbjct: 414 LRRAGRFDREICLGIPDEASRERILQTLCRKLRLPETFPFRHLA 457
Score = 283 (104.7 bits), Expect = 2.2e-29, Sum P(3) = 2.2e-29
Identities = 53/129 (41%), Positives = 83/129 (64%)
Query: 125 DLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGV 184
D+G +E + EEL M ++ P+ P+ + LG+ AG+LL GPPGCGKT LA A+ANE+G+
Sbjct: 581 DIGALEDIREELTMAILAPVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVANESGL 640
Query: 185 PFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRI 244
F + E+++ G SE +R +F +A +AP ++F DE+DA+ +R + + R+
Sbjct: 641 NFISVKGPELLNMYVGESERAVRQVFQRARSSAPCVIFFDEVDALCPRRSDRETGASVRV 700
Query: 245 VTQLMTCMD 253
V QL+T MD
Sbjct: 701 VNQLLTEMD 709
Score = 128 (50.1 bits), Expect = 2.2e-29, Sum P(3) = 2.2e-29
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRN 324
V ++ ATNRPD +DPA+ RPGR D+ + +G+P R+ IL +T+N
Sbjct: 717 VFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKN 763
Score = 39 (18.8 bits), Expect = 2.4e-126, Sum P(3) = 2.4e-126
Identities = 9/12 (75%), Positives = 10/12 (83%)
Query: 3 LEDEHV-KRRRQ 13
LEDEH+ KR RQ
Sbjct: 78 LEDEHLAKRARQ 89
>ZFIN|ZDB-GENE-040426-2871 [details] [associations]
symbol:nvl "nuclear VCP-like" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-2871 GO:GO:0005524 HSSP:Q01853 GO:GO:0017111
KO:K14571 CTD:4931 HOVERGEN:HBG001226 EMBL:BC044464 IPI:IPI00503965
RefSeq:NP_998649.1 UniGene:Dr.2359 ProteinModelPortal:Q803I9
STRING:Q803I9 PRIDE:Q803I9 GeneID:406805 KEGG:dre:406805
NextBio:20818314 ArrayExpress:Q803I9 Bgee:Q803I9 Uniprot:Q803I9
Length = 796
Score = 1239 (441.2 bits), Expect = 3.7e-126, P = 3.7e-126
Identities = 274/654 (41%), Positives = 378/654 (57%)
Query: 55 KSMLRD-SYSESKITRRKSEEKNIEFEVMPRKIDLVNAKSREVEMKKEES--VXXXXXXX 111
+S+L D ES T + + +E E + + K ++E E S V
Sbjct: 157 ESILIDLCEEESSSTTNQRDSSRLEKE--KKSVKQKRQKKNKLEEDSETSAGVPAKKSKV 214
Query: 112 XXXXXXXXXPRFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGK 171
+F+D GG + LEE+ ++++ + HP++ Q LGV P G LL+GPPGCGK
Sbjct: 215 KGFELQFSSVKFEDFGGSDETLEEV-CKLLIHMRHPEVYQRLGVVPPRGFLLHGPPGCGK 273
Query: 172 TKLAHAIANETGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIAS 231
T LA A+A ET +P KISA E+VSGVSG SE+ +R+LF +A +AP I+FIDEIDAI
Sbjct: 274 TLLAQAVAGETALPLLKISAPELVSGVSGESEQKLRELFEQAISSAPCILFIDEIDAITP 333
Query: 232 KRENLQREMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVD 291
KRE ++MERRIV QL+TCMD+ + +++P VLVIGATNRPD++D
Sbjct: 334 KRETASKDMERRIVAQLLTCMDDLNSMLEPAQ--------------VLVIGATNRPDSLD 379
Query: 292 PALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXX 351
PALRR GRFDREI LG+PDE AR++IL L R +R+ FD +AR TPG+V
Sbjct: 380 PALRRAGRFDREICLGIPDEGARMKILKTLCRKIRLPDDFDFRHLARLTPGYVGADLMAL 439
Query: 352 XXXXXXXXMKRIIDQRKSE--LSGNSIAEQHSDDWWRQPWLPEE-MERLTITMTDFEEAT 408
+ RI+ + +E ++ + D L E+ + L + M+DF +
Sbjct: 440 CREAAMNAVNRILLEPTTEDQITPTLALARLLDLLKSSVSLSEDQLAALCVLMSDFSSSL 499
Query: 409 KMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLL 468
VQPS++REGF+ +P+V W DVG L +R E I+ I+ PE+++ G+ G LL
Sbjct: 500 VRVQPSAKREGFATVPDVTWADVGALQDVREELHMAIMAPIQNPEQFKALGLSAPAGLLL 559
Query: 469 YGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFF 528
GPPGCGKTL+AKAVAN +G NFI +KGPELLN YVGESE AVR +F R R +PC++FF
Sbjct: 560 AGPPGCGKTLLAKAVANASGLNFISVKGPELLNMYVGESERAVRQVFQRGRNSAPCVIFF 619
Query: 529 DEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRF 588
DE+DAL +R + R++NQLL E+DG + R+ VF++ ATNRPD++D AVLRPGR
Sbjct: 620 DEIDALCPRRSEHESGASVRVVNQLLTEMDGMENRRQVFIMAATNRPDIIDPAVLRPGRL 679
Query: 589 GKLLYVPLPTPDERGLILEALAR--KKP-IDDSVDLHTIAQSKFCENLSGXXXXXXXXXX 645
K LYV LP +R IL + + KP +D V L IA CE +G
Sbjct: 680 DKTLYVGLPPAADRHAILNTITKGGTKPQLDSDVSLEEIAHDARCETFTGADLSALVREA 739
Query: 646 XXXXXXXKLISSKSSSD-VTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSET 698
L +++ ++ + HFE A K+ PSVS+ Y+ L ET
Sbjct: 740 CVNALRVHLDPAQTHTESAKDIRVSRVHFEDAFKKVRPSVSKKDQLMYERLRET 793
>RGD|1311270 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0016235 "aggresome"
evidence=IEA;ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1311270 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 KO:K14571 EMBL:CH473985 CTD:4931 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN GeneTree:ENSGT00570000079239 IPI:IPI00371541
RefSeq:NP_001099450.1 UniGene:Rn.8896 Ensembl:ENSRNOT00000004927
GeneID:289323 KEGG:rno:289323 UCSC:RGD:1311270 NextBio:629627
Uniprot:D3ZTY9
Length = 855
Score = 1227 (437.0 bits), Expect = 7.0e-125, P = 7.0e-125
Identities = 266/607 (43%), Positives = 369/607 (60%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
+F+D+GG ++ L+E+ ++++ + HP++ Q LGV P G+LL+GPPGCGKT LAHAIA E
Sbjct: 262 KFEDVGGNDATLKEV-CKMLIHMRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGE 320
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREME 241
+P K++A E+VSGVSG SE+ +RDLF +A AP IVFIDEIDAI KRE ++ME
Sbjct: 321 LDLPILKVAAPEIVSGVSGESEQKLRDLFDQAVSNAPCIVFIDEIDAITPKREVASKDME 380
Query: 242 RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFD 301
RRIV QL+TCMD+ + + VLV+GATNRPD++DPALRR GRFD
Sbjct: 381 RRIVAQLLTCMDDLNNVAATAR--------------VLVVGATNRPDSLDPALRRAGRFD 426
Query: 302 REIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXXMK 361
RE+ LG+PDE +R +IL L R LR+ +F+ +A TPGFV +
Sbjct: 427 REVCLGIPDEASRERILQTLCRKLRLPETFNFSHLAHLTPGFVGADLMALCREAAVCAVH 486
Query: 362 RII----DQRKSELS----------GNSI-AEQHS---DDWWR--------QPWLPEEME 395
R++ +Q+++E G S+ AE S D+ R P E+M+
Sbjct: 487 RVLMRRQEQQRTEPETGGLPSDGEQGRSLGAEPPSETQDELQRLLGLLRDQDPISEEQMQ 546
Query: 396 RLTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEY 455
L + + DF A VQPS++REGF +PNV W DVG L+ +R E I+ ++ PE++
Sbjct: 547 GLCLELNDFIVALSEVQPSAKREGFVTVPNVTWADVGALEDIREELTMAILAPVRNPEQF 606
Query: 456 EEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLF 515
G+ G LL GPPGCGKTL+AKAVANE+G NFI +KGPELLN YVGESE AVR +F
Sbjct: 607 RALGLVAPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVF 666
Query: 516 SRARTCSPCILFFDEVDALTTKRG-KEGGWVVERLLNQLLIELDGADKRKGVFVIGATNR 574
RA+ +PC++FFDEVDAL +R +E G V R++NQLL E+DG + R+ VF++ ATNR
Sbjct: 667 QRAKNSAPCVIFFDEVDALCPRRSDRETGASV-RVVNQLLTEMDGLETRQQVFILAATNR 725
Query: 575 PDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALAR---KKPIDDSVDLHTIAQSKFCE 631
PD++D A+LRPGR K L+V LP P +R IL+ + + K P+D+ VDL IA C+
Sbjct: 726 PDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTITKNGTKPPLDEDVDLEAIANDHRCD 785
Query: 632 NLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQR 691
+G ++ K+ T+ HFE+A K+ PS+S +
Sbjct: 786 CYTGADLSALVREASLCALRQEITGQKNGIGTAELTVSHKHFEEAFRKVKPSISVKDQRM 845
Query: 692 YKTLSET 698
Y+ L +
Sbjct: 846 YEALQRS 852
Score = 359 (131.4 bits), Expect = 9.5e-30, P = 9.5e-30
Identities = 80/206 (38%), Positives = 121/206 (58%)
Query: 423 IPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKA 482
I +VK+EDVGG D E + ++ ++ PE Y+ GV G LL+GPPGCGKTL+A A
Sbjct: 258 ISSVKFEDVGGNDATLKEVCKMLIH-MRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHA 316
Query: 483 VANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEG 542
+A E + + PE+++ GESE +R LF +A + +PCI+F DE+DA+T KR
Sbjct: 317 IAGELDLPILKVAAPEIVSGVSGESEQKLRDLFDQAVSNAPCIVFIDEIDAITPKREVAS 376
Query: 543 GWVVERLLNQLLI---ELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTP 599
+ R++ QLL +L+ V V+GATNRPD +D A+ R GRF + + + +P
Sbjct: 377 KDMERRIVAQLLTCMDDLNNVAATARVLVVGATNRPDSLDPALRRAGRFDREVCLGIPDE 436
Query: 600 DERGLILEALARKKPIDDSVDLHTIA 625
R IL+ L RK + ++ + +A
Sbjct: 437 ASRERILQTLCRKLRLPETFNFSHLA 462
>UNIPROTKB|H0Y8B6 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
Ensembl:ENST00000469968 Uniprot:H0Y8B6
Length = 739
Score = 1205 (429.2 bits), Expect = 1.7e-124, Sum P(2) = 1.7e-124
Identities = 276/675 (40%), Positives = 388/675 (57%)
Query: 60 DSYSESKITRRKSEEKNIEFEVMPRKIDLVNAKS-REVEMKKE-----ESVXXXXXXXXX 113
DS E + S++ ++ M RK L N S R+ E +E E+V
Sbjct: 78 DSSMEDYPDPQDSKDSSLLESDMKRKGKLKNKGSKRKKEDLQEVDGEIEAVLQKKAKARG 137
Query: 114 XXXXXXXPRFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTK 173
+F+D+GG + L+E+ ++++ + HP++ LGV P G+LL+GPPGCGKT
Sbjct: 138 LEFQISNVKFEDVGGNDMTLKEV-CKMLIHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTL 196
Query: 174 LAHAIANETGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR 233
LAHAIA E +P K++A E+VSGVSG SE+ +R+LF +A AP I+FIDEIDAI KR
Sbjct: 197 LAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKR 256
Query: 234 ENLQREMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPA 293
E ++MERRIV QL+TCMD+ + + VLVIGATNRPD++DPA
Sbjct: 257 EVASKDMERRIVAQLLTCMDDLNNVAATAR--------------VLVIGATNRPDSLDPA 302
Query: 294 LRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXX 353
LRR GRFDREI LG+PDE +R +IL L R LR+ +FD +A TPGFV
Sbjct: 303 LRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCR 362
Query: 354 XXXXXXMKRII----DQRKS-----ELSGNSIAEQH---------SDDWWR--------Q 387
+ R++ +Q+K +L + E+ D+ R
Sbjct: 363 EAAMCAVNRVLMKLQEQQKKNPEMEDLPSKGVQEERLGTEPTSETQDELQRLLGLLRDQD 422
Query: 388 PWLPEEMERLTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVR 447
P E+M+ L I + DF A VQPS++REGF +PNV W D+G L+ +R E I+
Sbjct: 423 PLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILA 482
Query: 448 RIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGES 507
++ P++++ G+ G LL GPPGCGKTL+AKAVANE+G NFI +KGPELLN YVGES
Sbjct: 483 PVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGES 542
Query: 508 ELAVRTLFSRARTCSPCILFFDEVDALTTKRG-KEGGWVVERLLNQLLIELDGADKRKGV 566
E AVR +F RA+ +PC++FFDEVDAL +R +E G V R++NQLL E+DG + R+ V
Sbjct: 543 ERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASV-RVVNQLLTEMDGLEARQQV 601
Query: 567 FVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALAR---KKPIDDSVDLHT 623
F++ ATNRPD++D A+LRPGR K L+V LP P +R IL+ + + K P+D V+L
Sbjct: 602 FIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEA 661
Query: 624 IAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPS 683
IA C+ +G ++ KS ++ + HFE+A K+ S
Sbjct: 662 IAGDLRCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKVSHKHFEEAFKKVRSS 721
Query: 684 VSELQIQRYKTLSET 698
+S+ Y+ L E+
Sbjct: 722 ISKKDQIMYERLQES 736
Score = 39 (18.8 bits), Expect = 1.7e-124, Sum P(2) = 1.7e-124
Identities = 9/12 (75%), Positives = 10/12 (83%)
Query: 3 LEDEHV-KRRRQ 13
LEDEH+ KR RQ
Sbjct: 52 LEDEHLAKRARQ 63
>UNIPROTKB|O15381 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
EMBL:U68140 EMBL:U78772 EMBL:AK297396 EMBL:AK298244 EMBL:AC092809
EMBL:BC012105 IPI:IPI00006197 IPI:IPI00183080 IPI:IPI00185801
RefSeq:NP_001230075.1 RefSeq:NP_001230076.1 RefSeq:NP_002524.2
RefSeq:NP_996671.1 UniGene:Hs.497867 PDB:2X8A PDBsum:2X8A
ProteinModelPortal:O15381 SMR:O15381 IntAct:O15381
MINT:MINT-1423251 STRING:O15381 PhosphoSite:O15381
SWISS-2DPAGE:O15381 PaxDb:O15381 PRIDE:O15381 DNASU:4931
Ensembl:ENST00000281701 Ensembl:ENST00000340871
Ensembl:ENST00000391875 Ensembl:ENST00000469075 GeneID:4931
KEGG:hsa:4931 UCSC:uc001hok.3 CTD:4931 GeneCards:GC01M224416
HGNC:HGNC:8070 HPA:HPA028207 MIM:602426 neXtProt:NX_O15381
PharmGKB:PA31857 HOVERGEN:HBG001226 InParanoid:O15381 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN PhylomeDB:O15381 ChiTaRS:NVL
EvolutionaryTrace:O15381 GenomeRNAi:4931 NextBio:19001
ArrayExpress:O15381 Bgee:O15381 CleanEx:HS_NVL
Genevestigator:O15381 GermOnline:ENSG00000143748 Uniprot:O15381
Length = 856
Score = 1203 (428.5 bits), Expect = 2.7e-124, Sum P(2) = 2.7e-124
Identities = 261/607 (42%), Positives = 365/607 (60%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
+F+D+GG + L+E+ ++++ + HP++ LGV P G+LL+GPPGCGKT LAHAIA E
Sbjct: 263 KFEDVGGNDMTLKEV-CKMLIHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGE 321
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREME 241
+P K++A E+VSGVSG SE+ +R+LF +A AP I+FIDEIDAI KRE ++ME
Sbjct: 322 LDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVASKDME 381
Query: 242 RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFD 301
RRIV QL+TCMD+ + + VLVIGATNRPD++DPALRR GRFD
Sbjct: 382 RRIVAQLLTCMDDLNNVAATAR--------------VLVIGATNRPDSLDPALRRAGRFD 427
Query: 302 REIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXXMK 361
REI LG+PDE +R +IL L R LR+ +FD +A TPGFV +
Sbjct: 428 REICLGIPDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVN 487
Query: 362 RII----DQRKS-----ELSGNSIAEQH---------SDDWWR--------QPWLPEEME 395
R++ +Q+K +L + E+ D+ R P E+M+
Sbjct: 488 RVLMKLQEQQKKNPEMEDLPSKGVQEERLGTEPTSETQDELQRLLGLLRDQDPLSEEQMQ 547
Query: 396 RLTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEY 455
L I + DF A VQPS++REGF +PNV W D+G L+ +R E I+ ++ P+++
Sbjct: 548 GLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQF 607
Query: 456 EEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLF 515
+ G+ G LL GPPGCGKTL+AKAVANE+G NFI +KGPELLN YVGESE AVR +F
Sbjct: 608 KALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVF 667
Query: 516 SRARTCSPCILFFDEVDALTTKRG-KEGGWVVERLLNQLLIELDGADKRKGVFVIGATNR 574
RA+ +PC++FFDEVDAL +R +E G V R++NQLL E+DG + R+ VF++ ATNR
Sbjct: 668 QRAKNSAPCVIFFDEVDALCPRRSDRETGASV-RVVNQLLTEMDGLEARQQVFIMAATNR 726
Query: 575 PDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALAR---KKPIDDSVDLHTIAQSKFCE 631
PD++D A+LRPGR K L+V LP P +R IL+ + + K P+D V+L IA C+
Sbjct: 727 PDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCD 786
Query: 632 NLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQR 691
+G ++ KS ++ + HFE+A K+ S+S+
Sbjct: 787 CYTGADLSALVREASICALRQEMARQKSGNEKGELKVSHKHFEEAFKKVRSSISKKDQIM 846
Query: 692 YKTLSET 698
Y+ L E+
Sbjct: 847 YERLQES 853
Score = 373 (136.4 bits), Expect = 9.2e-31, Sum P(2) = 9.2e-31
Identities = 86/224 (38%), Positives = 126/224 (56%)
Query: 406 EATKMVQPSSRREGFS-AIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLET 464
E ++Q ++ G I NVK+EDVGG D E + ++ ++ PE Y GV
Sbjct: 241 EIEAVLQKKAKARGLEFQISNVKFEDVGGNDMTLKEVCKMLIH-MRHPEVYHHLGVVPPR 299
Query: 465 GFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPC 524
G LL+GPPGCGKTL+A A+A E + + PE+++ GESE +R LF +A + +PC
Sbjct: 300 GVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPC 359
Query: 525 ILFFDEVDALTTKRGKEGGWVVERLLNQLLI---ELDGADKRKGVFVIGATNRPDVMDRA 581
I+F DE+DA+T KR + R++ QLL +L+ V VIGATNRPD +D A
Sbjct: 360 IIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPA 419
Query: 582 VLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
+ R GRF + + + +P R IL+ L RK + + D +A
Sbjct: 420 LRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFDFCHLA 463
Score = 39 (18.8 bits), Expect = 2.7e-124, Sum P(2) = 2.7e-124
Identities = 9/12 (75%), Positives = 10/12 (83%)
Query: 3 LEDEHV-KRRRQ 13
LEDEH+ KR RQ
Sbjct: 78 LEDEHLAKRARQ 89
>SGD|S000003957 [details] [associations]
symbol:RIX7 "Putative ATPase of the AAA family" species:4932
"Saccharomyces cerevisiae" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IGI;IMP] [GO:0030687 "preribosome,
large subunit precursor" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003957
GO:GO:0005524 GO:GO:0005730 EMBL:BK006945 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0042273 GO:GO:0030687
GO:GO:0000055 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:Z73139 PIR:S64785 RefSeq:NP_013066.1 ProteinModelPortal:Q07844
SMR:Q07844 DIP:DIP-6385N IntAct:Q07844 MINT:MINT-621241
STRING:Q07844 PaxDb:Q07844 PeptideAtlas:Q07844 EnsemblFungi:YLL034C
GeneID:850625 KEGG:sce:YLL034C CYGD:YLL034c OrthoDB:EOG40GH00
NextBio:966532 Genevestigator:Q07844 GermOnline:YLL034C
Uniprot:Q07844
Length = 837
Score = 644 (231.8 bits), Expect = 3.1e-124, Sum P(3) = 3.1e-124
Identities = 130/291 (44%), Positives = 183/291 (62%)
Query: 375 SIAEQHSDDWWRQPWLPEEMERLTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGL 434
S+ +Q ++ +P E++ L+I DF +A +QP+++REGF+ +P+V W +VG L
Sbjct: 480 SVVQQFIRNY-PEPLSGEQLSLLSIKYEDFLKALPTIQPTAKREGFATVPDVTWANVGAL 538
Query: 435 DYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHI 494
+R E + IV+ IK PE YE+ G+ G LL+GPPGCGKTL+AKAVANE+ ANFI I
Sbjct: 539 QRVRLELNMAIVQPIKRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVANESRANFISI 598
Query: 495 KGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLL 554
KGPELLNKYVGESE ++R +F+RAR PC++FFDE+DAL +R R++N LL
Sbjct: 599 KGPELLNKYVGESERSIRQVFTRARASVPCVIFFDELDALVPRRDTSLSESSSRVVNTLL 658
Query: 555 IELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKK- 613
ELDG + R+G+FVIGATNRPD++D A+LRPGR K L++ LP +E+ I++ L +
Sbjct: 659 TELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEKLDIIKTLTKSHG 718
Query: 614 -PIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDV 663
P+ VD I +++ C N SG K S+ V
Sbjct: 719 TPLSSDVDFEEIIRNEKCNNFSGADLAALVRESSVLALKRKFFQSEEIQSV 769
Score = 559 (201.8 bits), Expect = 3.1e-124, Sum P(3) = 3.1e-124
Identities = 137/344 (39%), Positives = 189/344 (54%)
Query: 45 EKVEPEFDLMKSMLRDSYSESKITRRKSEEKNIEFEVMPRKIDLVNAKSREVEMKKEESV 104
EK E +L K + +++ +R + + V + + K+ EV+ K+ S
Sbjct: 123 EKPSLEEELAKKNMMIERDTNEMNKRITSTWSKSGSVSESITETDDPKTEEVKKSKKRSK 182
Query: 105 XXXXXXXXXXXXXXXXP---RFQDLGGMESVLEELKMEVI-VPLYHPQLPQWLGVRPMAG 160
P + LGGM+ V+ +L ME+I +P+ HP++ GV P G
Sbjct: 183 EGTCKVKRQKIKEDRSPPNSSLKSLGGMDDVVAQL-MELIGLPILHPEIFLSTGVEPPRG 241
Query: 161 ILLYGPPGCGKTKLAHAIANETGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSI 220
+LL+GPPGCGKT +A+A+A E VPF ISA VVSG+SG SE+ IRDLF +A AP +
Sbjct: 242 VLLHGPPGCGKTSIANALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAPCL 301
Query: 221 VFIDEIDAIASKREN-LQREMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVL 279
VF DEIDAI KR+ QREMERRIV QL+T MDE P V+
Sbjct: 302 VFFDEIDAITPKRDGGAQREMERRIVAQLLTSMDE-----------LTMEKTNGKP--VI 348
Query: 280 VIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARS 339
+IGATNRPD++D ALRR GRFDREI L VP+E +R+ IL ++ NL+++G+ D K+A+
Sbjct: 349 IIGATNRPDSLDAALRRAGRFDREICLNVPNEVSRLHILKKMSDNLKIDGAIDFAKLAKL 408
Query: 340 TPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDD 383
TPGFV +KRI + S + A S+D
Sbjct: 409 TPGFVGADLKALVTAAGTCAIKRIFQTYANIKSTPTTATDSSED 452
Score = 359 (131.4 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 89/229 (38%), Positives = 130/229 (56%)
Query: 405 EEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLET 464
+E T V+ +E S PN + +GG+D + + I I PE + GV+
Sbjct: 182 KEGTCKVKRQKIKEDRSP-PNSSLKSLGGMDDVVAQLMELIGLPILHPEIFLSTGVEPPR 240
Query: 465 GFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPC 524
G LL+GPPGCGKT IA A+A E FI I P +++ GESE +R LF AR+ +PC
Sbjct: 241 GVLLHGPPGCGKTSIANALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAPC 300
Query: 525 ILFFDEVDALTTKRGKEGGWVVE---RLLNQLLIELDGA--DKRKG--VFVIGATNRPDV 577
++FFDE+DA+T KR +GG E R++ QLL +D +K G V +IGATNRPD
Sbjct: 301 LVFFDEIDAITPKR--DGGAQREMERRIVAQLLTSMDELTMEKTNGKPVIIIGATNRPDS 358
Query: 578 MDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 626
+D A+ R GRF + + + +P R IL+ ++ ID ++D +A+
Sbjct: 359 LDAALRRAGRFDREICLNVPNEVSRLHILKKMSDNLKIDGAIDFAKLAK 407
Score = 265 (98.3 bits), Expect = 1.0e-30, Sum P(2) = 1.0e-30
Identities = 49/129 (37%), Positives = 81/129 (62%)
Query: 125 DLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGV 184
++G ++ V EL M ++ P+ P+L + +G+ G+LL+GPPGCGKT LA A+ANE+
Sbjct: 534 NVGALQRVRLELNMAIVQPIKRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVANESRA 593
Query: 185 PFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRI 244
F I E+++ G SE +IR +F++A + P ++F DE+DA+ +R+ E R+
Sbjct: 594 NFISIKGPELLNKYVGESERSIRQVFTRARASVPCVIFFDELDALVPRRDTSLSESSSRV 653
Query: 245 VTQLMTCMD 253
V L+T +D
Sbjct: 654 VNTLLTELD 662
Score = 156 (60.0 bits), Expect = 1.0e-30, Sum P(2) = 1.0e-30
Identities = 39/141 (27%), Positives = 68/141 (48%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRN--LRVEGSFDLVK 335
+ VIGATNRPD +DPA+ RPGR D+ + + +P+ ++ I+ LT++ + D +
Sbjct: 670 IFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEKLDIIKTLTKSHGTPLSSDVDFEE 729
Query: 336 IARSTP--GFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEE 393
I R+ F +KR Q + E+ S+ + D + +
Sbjct: 730 IIRNEKCNNFSGADLAALVRESSVLALKRKFFQSE-EIQ--SVLDNDLDKEFEDLSVGVS 786
Query: 394 MERLTITMTDFEEATKMVQPS 414
E + +TM+DF A + ++PS
Sbjct: 787 GEEIIVTMSDFRSALRKIKPS 807
Score = 53 (23.7 bits), Expect = 3.1e-124, Sum P(3) = 3.1e-124
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 668 IKLTHFEQALSKISPSVSELQIQRYKTLSE 697
+ ++ F AL KI PSVS+ +Y L++
Sbjct: 792 VTMSDFRSALRKIKPSVSDKDRLKYDRLNK 821
>CGD|CAL0000102 [details] [associations]
symbol:RIX7 species:5476 "Candida albicans" [GO:0030448
"hyphal growth" evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 700 (251.5 bits), Expect = 1.2e-123, Sum P(2) = 1.2e-123
Identities = 155/324 (47%), Positives = 200/324 (61%)
Query: 388 PWLPEEMERLTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVR 447
P E++ L IT DF A VQPS++REGF+ IP+V W++VG L +R E IV+
Sbjct: 481 PLNQEQLAPLAITYQDFVNALPSVQPSAKREGFATIPDVTWQNVGALFKIRMELHMCIVQ 540
Query: 448 RIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGES 507
IK PE Y + G+ G L++GPPGCGKTL+AKAVANE+ ANFI IKGPELLNKYVGES
Sbjct: 541 PIKKPELYLKVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGES 600
Query: 508 ELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVF 567
E AVR +F RAR +PCI+FFDE+DAL +R R++N LL ELDG + RKGVF
Sbjct: 601 EKAVRQVFQRARASTPCIIFFDELDALVPRRDTSMSESSSRVVNTLLTELDGLNDRKGVF 660
Query: 568 VIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALAR--KKPIDDSVDLHTIA 625
VIGATNRPD++D A+LRPGR K LY+ LPTP+ER IL+ L R P+ +VDL+ I+
Sbjct: 661 VIGATNRPDMIDPAMLRPGRLDKTLYIELPTPEERLEILKTLVRTSNSPLHANVDLNAIS 720
Query: 626 QSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSS--DVTPF--------TIKLT--HF 673
+ C N SG + ++ D + F I +T F
Sbjct: 721 RDSRCGNFSGADLSSLVKEAGVWALKKRFFQNQKIQELDSSGFYEDSIGEDDISITAEDF 780
Query: 674 EQALSKISPSVSELQIQRYKTLSE 697
+ ALS I PSVS+ RY+ L++
Sbjct: 781 DHALSSIRPSVSDRDRMRYEKLNK 804
Score = 536 (193.7 bits), Expect = 1.2e-123, Sum P(2) = 1.2e-123
Identities = 120/254 (47%), Positives = 164/254 (64%)
Query: 126 LGGMESVLEELKMEVI-VPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGV 184
LGG+ESV +L +E+I +P+ HP++ GV P G+LLYGPPGCGKT +A+A+A E V
Sbjct: 195 LGGVESVTTQL-LEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGKTTIANALAGELKV 253
Query: 185 PFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKREN-LQREMERR 243
PF ISA VVSG+SG SE+ +R++F +A + AP ++F+DEIDAI KR+ QREME+R
Sbjct: 254 PFINISAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAITPKRDGGAQREMEKR 313
Query: 244 IVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDRE 303
IV QL+T MDE L + G P V+VIGATNRPD++D ALRR GRFDRE
Sbjct: 314 IVAQLLTLMDEL-TLEKTGGK----------P--VVVIGATNRPDSLDSALRRAGRFDRE 360
Query: 304 IVLGVPDENARVQILSVLTRNLRVEGS--FDLVKIARSTPGFVXXXXXXXXXXXXXXXMK 361
I L VP+E R+ IL +T+N+++E F+ ++++ TPG+V +K
Sbjct: 361 ICLNVPNEEQRISILKAMTKNIKLENGEHFNYRELSKLTPGYVGADLKSLVTAAGISAIK 420
Query: 362 RIIDQRKSELSGNS 375
RI + SEL S
Sbjct: 421 RIFETM-SELQEES 433
Score = 352 (129.0 bits), Expect = 5.3e-29, P = 5.3e-29
Identities = 83/218 (38%), Positives = 126/218 (57%)
Query: 407 ATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGF 466
A ++ R+ +S PN+ +GG++ + + I I PE Y GV+ G
Sbjct: 172 AKTQLKKQKRKIDYST-PNIDLSSLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGV 230
Query: 467 LLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCIL 526
LLYGPPGCGKT IA A+A E FI+I P +++ GESE +R +F A+ +PC++
Sbjct: 231 LLYGPPGCGKTTIANALAGELKVPFINISAPSVVSGMSGESEKKLREIFEEAKQIAPCLI 290
Query: 527 FFDEVDALTTKRGKEGGWVVE---RLLNQLLIELDGA--DKRKG--VFVIGATNRPDVMD 579
F DE+DA+T KR +GG E R++ QLL +D +K G V VIGATNRPD +D
Sbjct: 291 FMDEIDAITPKR--DGGAQREMEKRIVAQLLTLMDELTLEKTGGKPVVVIGATNRPDSLD 348
Query: 580 RAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDD 617
A+ R GRF + + + +P ++R IL+A+ + +++
Sbjct: 349 SALRRAGRFDREICLNVPNEEQRISILKAMTKNIKLEN 386
Score = 259 (96.2 bits), Expect = 5.2e-29, Sum P(2) = 5.2e-29
Identities = 49/131 (37%), Positives = 81/131 (61%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+Q++G + + EL M ++ P+ P+L +G+ AG+L++GPPGCGKT LA A+ANE+
Sbjct: 521 WQNVGALFKIRMELHMCIVQPIKKPELYLKVGIAAPAGVLMWGPPGCGKTLLAKAVANES 580
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F I E+++ G SE+ +R +F +A + P I+F DE+DA+ +R+ E
Sbjct: 581 RANFISIKGPELLNKYVGESEKAVRQVFQRARASTPCIIFFDELDALVPRRDTSMSESSS 640
Query: 243 RIVTQLMTCMD 253
R+V L+T +D
Sbjct: 641 RVVNTLLTELD 651
Score = 146 (56.5 bits), Expect = 5.2e-29, Sum P(2) = 5.2e-29
Identities = 43/141 (30%), Positives = 67/141 (47%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTR--NLRVEGSFDLVK 335
V VIGATNRPD +DPA+ RPGR D+ + + +P R++IL L R N + + DL
Sbjct: 659 VFVIGATNRPDMIDPAMLRPGRLDKTLYIELPTPEERLEILKTLVRTSNSPLHANVDLNA 718
Query: 336 IARSTP--GFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEE 393
I+R + F +K+ Q + I E S ++ + E+
Sbjct: 719 ISRDSRCGNFSGADLSSLVKEAGVWALKKRFFQNQK------IQELDSSGFYEDS-IGED 771
Query: 394 MERLTITMTDFEEATKMVQPS 414
++IT DF+ A ++PS
Sbjct: 772 --DISITAEDFDHALSSIRPS 790
>UNIPROTKB|Q5AGG2 [details] [associations]
symbol:RIX7 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0044011 "single-species biofilm formation
on inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 700 (251.5 bits), Expect = 1.2e-123, Sum P(2) = 1.2e-123
Identities = 155/324 (47%), Positives = 200/324 (61%)
Query: 388 PWLPEEMERLTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVR 447
P E++ L IT DF A VQPS++REGF+ IP+V W++VG L +R E IV+
Sbjct: 481 PLNQEQLAPLAITYQDFVNALPSVQPSAKREGFATIPDVTWQNVGALFKIRMELHMCIVQ 540
Query: 448 RIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGES 507
IK PE Y + G+ G L++GPPGCGKTL+AKAVANE+ ANFI IKGPELLNKYVGES
Sbjct: 541 PIKKPELYLKVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGES 600
Query: 508 ELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVF 567
E AVR +F RAR +PCI+FFDE+DAL +R R++N LL ELDG + RKGVF
Sbjct: 601 EKAVRQVFQRARASTPCIIFFDELDALVPRRDTSMSESSSRVVNTLLTELDGLNDRKGVF 660
Query: 568 VIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALAR--KKPIDDSVDLHTIA 625
VIGATNRPD++D A+LRPGR K LY+ LPTP+ER IL+ L R P+ +VDL+ I+
Sbjct: 661 VIGATNRPDMIDPAMLRPGRLDKTLYIELPTPEERLEILKTLVRTSNSPLHANVDLNAIS 720
Query: 626 QSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSS--DVTPF--------TIKLT--HF 673
+ C N SG + ++ D + F I +T F
Sbjct: 721 RDSRCGNFSGADLSSLVKEAGVWALKKRFFQNQKIQELDSSGFYEDSIGEDDISITAEDF 780
Query: 674 EQALSKISPSVSELQIQRYKTLSE 697
+ ALS I PSVS+ RY+ L++
Sbjct: 781 DHALSSIRPSVSDRDRMRYEKLNK 804
Score = 536 (193.7 bits), Expect = 1.2e-123, Sum P(2) = 1.2e-123
Identities = 120/254 (47%), Positives = 164/254 (64%)
Query: 126 LGGMESVLEELKMEVI-VPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGV 184
LGG+ESV +L +E+I +P+ HP++ GV P G+LLYGPPGCGKT +A+A+A E V
Sbjct: 195 LGGVESVTTQL-LEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGKTTIANALAGELKV 253
Query: 185 PFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKREN-LQREMERR 243
PF ISA VVSG+SG SE+ +R++F +A + AP ++F+DEIDAI KR+ QREME+R
Sbjct: 254 PFINISAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAITPKRDGGAQREMEKR 313
Query: 244 IVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDRE 303
IV QL+T MDE L + G P V+VIGATNRPD++D ALRR GRFDRE
Sbjct: 314 IVAQLLTLMDEL-TLEKTGGK----------P--VVVIGATNRPDSLDSALRRAGRFDRE 360
Query: 304 IVLGVPDENARVQILSVLTRNLRVEGS--FDLVKIARSTPGFVXXXXXXXXXXXXXXXMK 361
I L VP+E R+ IL +T+N+++E F+ ++++ TPG+V +K
Sbjct: 361 ICLNVPNEEQRISILKAMTKNIKLENGEHFNYRELSKLTPGYVGADLKSLVTAAGISAIK 420
Query: 362 RIIDQRKSELSGNS 375
RI + SEL S
Sbjct: 421 RIFETM-SELQEES 433
Score = 352 (129.0 bits), Expect = 5.3e-29, P = 5.3e-29
Identities = 83/218 (38%), Positives = 126/218 (57%)
Query: 407 ATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGF 466
A ++ R+ +S PN+ +GG++ + + I I PE Y GV+ G
Sbjct: 172 AKTQLKKQKRKIDYST-PNIDLSSLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGV 230
Query: 467 LLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCIL 526
LLYGPPGCGKT IA A+A E FI+I P +++ GESE +R +F A+ +PC++
Sbjct: 231 LLYGPPGCGKTTIANALAGELKVPFINISAPSVVSGMSGESEKKLREIFEEAKQIAPCLI 290
Query: 527 FFDEVDALTTKRGKEGGWVVE---RLLNQLLIELDGA--DKRKG--VFVIGATNRPDVMD 579
F DE+DA+T KR +GG E R++ QLL +D +K G V VIGATNRPD +D
Sbjct: 291 FMDEIDAITPKR--DGGAQREMEKRIVAQLLTLMDELTLEKTGGKPVVVIGATNRPDSLD 348
Query: 580 RAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDD 617
A+ R GRF + + + +P ++R IL+A+ + +++
Sbjct: 349 SALRRAGRFDREICLNVPNEEQRISILKAMTKNIKLEN 386
Score = 259 (96.2 bits), Expect = 5.2e-29, Sum P(2) = 5.2e-29
Identities = 49/131 (37%), Positives = 81/131 (61%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+Q++G + + EL M ++ P+ P+L +G+ AG+L++GPPGCGKT LA A+ANE+
Sbjct: 521 WQNVGALFKIRMELHMCIVQPIKKPELYLKVGIAAPAGVLMWGPPGCGKTLLAKAVANES 580
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F I E+++ G SE+ +R +F +A + P I+F DE+DA+ +R+ E
Sbjct: 581 RANFISIKGPELLNKYVGESEKAVRQVFQRARASTPCIIFFDELDALVPRRDTSMSESSS 640
Query: 243 RIVTQLMTCMD 253
R+V L+T +D
Sbjct: 641 RVVNTLLTELD 651
Score = 146 (56.5 bits), Expect = 5.2e-29, Sum P(2) = 5.2e-29
Identities = 43/141 (30%), Positives = 67/141 (47%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTR--NLRVEGSFDLVK 335
V VIGATNRPD +DPA+ RPGR D+ + + +P R++IL L R N + + DL
Sbjct: 659 VFVIGATNRPDMIDPAMLRPGRLDKTLYIELPTPEERLEILKTLVRTSNSPLHANVDLNA 718
Query: 336 IARSTP--GFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEE 393
I+R + F +K+ Q + I E S ++ + E+
Sbjct: 719 ISRDSRCGNFSGADLSSLVKEAGVWALKKRFFQNQK------IQELDSSGFYEDS-IGED 771
Query: 394 MERLTITMTDFEEATKMVQPS 414
++IT DF+ A ++PS
Sbjct: 772 --DISITAEDFDHALSSIRPS 790
>POMBASE|SPBC16E9.10c [details] [associations]
symbol:SPBC16E9.10c "AAA family ATPase Rix7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
"ribosomal large subunit export from nucleus" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
Uniprot:O14325
Length = 779
Score = 1210 (431.0 bits), Expect = 4.4e-123, P = 4.4e-123
Identities = 258/537 (48%), Positives = 336/537 (62%)
Query: 125 DLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGV 184
D+GG++ + EL V +P+ HP++ Q+ G+ P G+LL+GPPGCGKT LA+A+ANE GV
Sbjct: 175 DIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANELGV 234
Query: 185 PFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRI 244
PF ISA +VSG+SG SE+ +R++F +A AP ++FIDEIDA+ KRE+ QREMERRI
Sbjct: 235 PFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAVTPKRESAQREMERRI 294
Query: 245 VTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDREI 304
V Q +TCMDE P VLVIGATNRPD++D ALRR GRFDREI
Sbjct: 295 VAQFLTCMDE-----------LSFEKTDGKP--VLVIGATNRPDSLDSALRRAGRFDREI 341
Query: 305 VLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXXMKRII 364
L VP ++AR +IL + + L++ G FD ++A+ TPG+V +KRI
Sbjct: 342 CLTVPSQDAREKILRTMAKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIAIKRIF 401
Query: 365 -------------DQRKSEL-------SGNSIAEQHSDDWWR------QPWLPEEMERLT 398
D R +EL S +S+ HS R P PEE+E L
Sbjct: 402 NEISPLNKLDLNSDPRFNELDSDMALDSNDSLPLDHSSIIQRYLNAHPDPLSPEELEPLA 461
Query: 399 ITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEF 458
I DF EA VQPSS+REGF+ +P V W ++G L +R E IV+ IK PE Y+
Sbjct: 462 ICPQDFIEALAKVQPSSKREGFATVPGVSWNNIGALKSIRVELQMAIVQPIKRPELYQSV 521
Query: 459 GVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRA 518
G+ TG LL+GPPGCGKTL+AKAVANE+ ANFI I+GPELLNKYVGESE AVR +F RA
Sbjct: 522 GISAPTGVLLWGPPGCGKTLLAKAVANESKANFISIRGPELLNKYVGESERAVRQVFLRA 581
Query: 519 RTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVM 578
R SPC++FFDE+DA+ +R R++N LL ELDG R GV+VI ATNRPD++
Sbjct: 582 RASSPCVIFFDELDAMVPRRDDSLSEASSRVVNTLLTELDGLSDRSGVYVIAATNRPDII 641
Query: 579 DRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
D A+LRPGR K L V LP ER IL+ L ++ P+ + V+L + + + C N SG
Sbjct: 642 DPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQTPLHEEVNLDVLGRDERCSNFSG 698
Score = 712 (255.7 bits), Expect = 2.9e-72, Sum P(2) = 2.9e-72
Identities = 149/323 (46%), Positives = 201/323 (62%)
Query: 388 PWLPEEMERLTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVR 447
P PEE+E L I DF EA VQPSS+REGF+ +P V W ++G L +R E IV+
Sbjct: 451 PLSPEELEPLAICPQDFIEALAKVQPSSKREGFATVPGVSWNNIGALKSIRVELQMAIVQ 510
Query: 448 RIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGES 507
IK PE Y+ G+ TG LL+GPPGCGKTL+AKAVANE+ ANFI I+GPELLNKYVGES
Sbjct: 511 PIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVANESKANFISIRGPELLNKYVGES 570
Query: 508 ELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVF 567
E AVR +F RAR SPC++FFDE+DA+ +R R++N LL ELDG R GV+
Sbjct: 571 ERAVRQVFLRARASSPCVIFFDELDAMVPRRDDSLSEASSRVVNTLLTELDGLSDRSGVY 630
Query: 568 VIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQS 627
VI ATNRPD++D A+LRPGR K L V LP ER IL+ L ++ P+ + V+L + +
Sbjct: 631 VIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQTPLHEEVNLDVLGRD 690
Query: 628 KFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSD--VTPFT----IKLTH--FEQALSK 679
+ C N SG + + +S++ +T + I++T+ FE A
Sbjct: 691 ERCSNFSGADLAALVREAAVTALRSAVFADIASNEPEITQHSALEPIRVTNADFELAFKN 750
Query: 680 ISPSVSELQIQRYKTLSETFKAA 702
I PSVS+ Q+Y+ L++ + +A
Sbjct: 751 IKPSVSDRDRQKYQRLAKRWSSA 773
Score = 384 (140.2 bits), Expect = 4.3e-32, Sum P(2) = 4.3e-32
Identities = 95/283 (33%), Positives = 143/283 (50%)
Query: 360 MKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPE---EMERLTITMTDFEEATKMVQPSSR 416
M+ D E+ ++ + W P L E E E+ ++ + K S+
Sbjct: 93 MEEQSDSNLMEVKDTNVINKSITSLWSSPNLKEIDGEDEKKSVGQESITGSAKRKDRRSK 152
Query: 417 REGFS---AIPN------VKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFL 467
G A N + D+GGLD +E + IK PE Y+ G+ G L
Sbjct: 153 TNGSKRQKAEANREPPSDISLSDIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVL 212
Query: 468 LYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILF 527
L+GPPGCGKT++A A+ANE G FI I P +++ GESE VR +F A++ +PC++F
Sbjct: 213 LHGPPGCGKTMLANALANELGVPFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMF 272
Query: 528 FDEVDALTTKRGKEGGWVVERLLNQLLIELD--GADKRKG--VFVIGATNRPDVMDRAVL 583
DE+DA+T KR + R++ Q L +D +K G V VIGATNRPD +D A+
Sbjct: 273 IDEIDAVTPKRESAQREMERRIVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALR 332
Query: 584 RPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 626
R GRF + + + +P+ D R IL +A+ + D +A+
Sbjct: 333 RAGRFDREICLTVPSQDAREKILRTMAKGLKLSGDFDFRQLAK 375
Score = 268 (99.4 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 49/131 (37%), Positives = 84/131 (64%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ ++G ++S+ EL+M ++ P+ P+L Q +G+ G+LL+GPPGCGKT LA A+ANE+
Sbjct: 491 WNNIGALKSIRVELQMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVANES 550
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F I E+++ G SE +R +F +A ++P ++F DE+DA+ +R++ E
Sbjct: 551 KANFISIRGPELLNKYVGESERAVRQVFLRARASSPCVIFFDELDAMVPRRDDSLSEASS 610
Query: 243 RIVTQLMTCMD 253
R+V L+T +D
Sbjct: 611 RVVNTLLTELD 621
Score = 37 (18.1 bits), Expect = 2.9e-72, Sum P(2) = 2.9e-72
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 235 NLQREMERRIVTQLMTCMD 253
+L R++ER+I +L++ D
Sbjct: 7 SLSRDLERKIHERLVSLKD 25
>MGI|MGI:1914709 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914709
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
CTD:4931 HOVERGEN:HBG001226 OMA:NDMTLKE OrthoDB:EOG4ZPDTN
EMBL:AK004676 EMBL:AK054502 EMBL:AK140509 EMBL:BC031847
IPI:IPI00321884 RefSeq:NP_080447.1 UniGene:Mm.263464 PDB:2RRE
PDBsum:2RRE ProteinModelPortal:Q9DBY8 SMR:Q9DBY8 STRING:Q9DBY8
PhosphoSite:Q9DBY8 PaxDb:Q9DBY8 PRIDE:Q9DBY8
Ensembl:ENSMUST00000027797 GeneID:67459 KEGG:mmu:67459
UCSC:uc007dxb.1 GeneTree:ENSGT00570000079239 InParanoid:Q9DBY8
EvolutionaryTrace:Q9DBY8 NextBio:324638 Bgee:Q9DBY8 CleanEx:MM_NVL
Genevestigator:Q9DBY8 GermOnline:ENSMUSG00000026516 Uniprot:Q9DBY8
Length = 855
Score = 1210 (431.0 bits), Expect = 4.4e-123, P = 4.4e-123
Identities = 263/607 (43%), Positives = 364/607 (59%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
+F+D+GG ++ L+E+ ++++ + HP++ Q LGV P G+LL+GPPGCGKT LAHAIA E
Sbjct: 262 KFEDVGGNDATLKEV-CKMLIHMRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGE 320
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREME 241
+P K++A E+VSGVSG SE+ +R+LF +A AP IVFIDEIDAI KRE ++ME
Sbjct: 321 LDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEIDAITPKREVASKDME 380
Query: 242 RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFD 301
RRIV QL+TCMD+ + + VLVIGATNRPD++DPALRR GRFD
Sbjct: 381 RRIVAQLLTCMDDLNNVAATAR--------------VLVIGATNRPDSLDPALRRAGRFD 426
Query: 302 REIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXXMK 361
RE+ LG+PDE AR +IL L R LR+ +F+ +A TPGFV +
Sbjct: 427 REVCLGIPDEAARERILQTLCRKLRLPETFNFCHLAHLTPGFVGADLMALCREAAMCAVN 486
Query: 362 RII------DQRKSELSG-NSIAEQHS-----------DDWWR--------QPWLPEEME 395
R++ ++K E+ G S +Q D+ R P E+M+
Sbjct: 487 RVLMKQQAQQKKKPEIEGLPSEGDQEERLGAEPTSETQDELQRLLGLLRDQDPLSEEQMQ 546
Query: 396 RLTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEY 455
L I + DF A VQPS++REGF +PNV W D+G L+ +R E I+ ++ P+++
Sbjct: 547 GLCIELNDFIVALAEVQPSAKREGFVTVPNVTWADIGALEDIRDELIMAILAPVRNPDQF 606
Query: 456 EEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLF 515
G+ G LL GPPGCGKTL+AKAVANE+G NFI +KGPELLN YVGESE AVR +F
Sbjct: 607 RTLGLGTPAGILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVF 666
Query: 516 SRARTCSPCILFFDEVDALTTKRG-KEGGWVVERLLNQLLIELDGADKRKGVFVIGATNR 574
RA+ +PC++FFDEVDAL +R +E G V R++NQLL E+DG + R+ VF++ ATNR
Sbjct: 667 QRAKNSAPCVIFFDEVDALCPRRSDRETGASV-RVVNQLLTEMDGLETRQQVFILAATNR 725
Query: 575 PDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALAR---KKPIDDSVDLHTIAQSKFCE 631
PD++D A+LRPGR K L+V LP P +R IL+ + + K P+D+ V+L TIA C
Sbjct: 726 PDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTITKNGTKPPLDEDVNLETIANDLRCN 785
Query: 632 NLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQR 691
+G ++ + K+ + HFE A K+ PS+S
Sbjct: 786 CYTGADLTALVREASLCALRQEITAQKNGVGAGELKVSHKHFEDAFKKVKPSISIKDQVM 845
Query: 692 YKTLSET 698
Y+ L +
Sbjct: 846 YEALQRS 852
Score = 363 (132.8 bits), Expect = 3.3e-30, P = 3.3e-30
Identities = 87/236 (36%), Positives = 134/236 (56%)
Query: 395 ERLTITMTDFE-EATKMVQPSSR-REGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFP 452
+R T + + + E ++Q ++ R I NVK+EDVGG D E + ++ ++ P
Sbjct: 228 KRKTENLQEVDGEIEALLQKKAKARSTELQISNVKFEDVGGNDATLKEVCKMLIH-MRHP 286
Query: 453 EEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVR 512
E Y+ GV G LL+GPPGCGKTL+A A+A E + + PE+++ GESE +R
Sbjct: 287 EVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLR 346
Query: 513 TLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLI---ELDGADKRKGVFVI 569
LF +A + +PCI+F DE+DA+T KR + R++ QLL +L+ V VI
Sbjct: 347 ELFDQAVSNAPCIVFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVI 406
Query: 570 GATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
GATNRPD +D A+ R GRF + + + +P R IL+ L RK + ++ + +A
Sbjct: 407 GATNRPDSLDPALRRAGRFDREVCLGIPDEAARERILQTLCRKLRLPETFNFCHLA 462
>UNIPROTKB|E2QY79 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00570000079239 EMBL:AAEX03005293
EMBL:AAEX03005294 EMBL:AAEX03005295 EMBL:AAEX03005296
Ensembl:ENSCAFT00000025949 NextBio:20855189 Uniprot:E2QY79
Length = 851
Score = 1181 (420.8 bits), Expect = 5.8e-122, Sum P(2) = 5.8e-122
Identities = 256/595 (43%), Positives = 358/595 (60%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
+F+D+GG ++ L+E+ ++++ + HP++ LG P G+LL+GPPGCGKT LAHAIA E
Sbjct: 257 KFEDVGGNDATLKEV-CKMLIHMRHPEVYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAGE 315
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREME 241
+P K++ATEVVSGVSG SE+ +R+LF +A AP ++FIDEIDAI KRE ++ME
Sbjct: 316 LDLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEIDAITPKREVASKDME 375
Query: 242 RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFD 301
RRIV QL+TCMD+ + VLVIGATNRPD++DPALRR GRFD
Sbjct: 376 RRIVAQLLTCMDDLN--------------TTAATARVLVIGATNRPDSLDPALRRAGRFD 421
Query: 302 REIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXXMK 361
REI LG+PDE +R +IL L R LR+ +F +A TPGFV +
Sbjct: 422 REICLGIPDEASRERILQTLCRKLRLPETFPFRHLAHLTPGFVGADLMALCREAAMCAVS 481
Query: 362 RII----DQRKS--ELS------------GNSIAEQHSDDW-W-------RQPWLPEEME 395
R++ +Q+ + E+ G A + D+ W + P E+++
Sbjct: 482 RVLMTLQEQQPTDPEMGTLPSKGGQEDRVGTEPASETPDELQWLLELLRSQDPLSEEQLQ 541
Query: 396 RLTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEY 455
L I DF A VQPS++REGF +P+V W D+G L+ +R E I+ ++ PE++
Sbjct: 542 GLCIEWNDFTVALSSVQPSAKREGFVTVPSVTWADIGALEDIREELTMAILAPVRSPEQF 601
Query: 456 EEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLF 515
G+ G LL GPPGCGKTL+AKAVANE+G NFI +KGPELLN YVGESE AVR +F
Sbjct: 602 RALGLMTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVF 661
Query: 516 SRARTCSPCILFFDEVDALTTKRG-KEGGWVVERLLNQLLIELDGADKRKGVFVIGATNR 574
RAR+ +PC++FFDEVDAL +R +E G V R++NQLL E+DG + R+ VF++ ATNR
Sbjct: 662 QRARSSAPCVIFFDEVDALCPRRSDRETGASV-RVVNQLLTEMDGLEARQQVFIMAATNR 720
Query: 575 PDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALAR---KKPIDDSVDLHTIAQSKFCE 631
PD++D A+LRPGR K L+V LP P +R IL+ + + + P+D V+L +A C+
Sbjct: 721 PDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTRPPLDADVNLEALAADLRCD 780
Query: 632 NLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPSVSE 686
SG +++ K D + HFE+A K+ S+S+
Sbjct: 781 CYSGADLSALVREASICALRQEMMRPKGGGDRGELKVSQKHFEEAFKKVKSSISK 835
Score = 346 (126.9 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 80/224 (35%), Positives = 123/224 (54%)
Query: 406 EATKMVQPSSRREGFSA-IPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLET 464
E ++ ++ +G + VK+EDVGG D E + ++ ++ PE Y G
Sbjct: 235 EIEGVLHKKAKAKGLELQVSRVKFEDVGGNDATLKEVCKMLIH-MRHPEVYHHLGAVPPR 293
Query: 465 GFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPC 524
G LL+GPPGCGKTL+A A+A E + + E+++ GESE +R LF +A + +PC
Sbjct: 294 GVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPC 353
Query: 525 ILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKG---VFVIGATNRPDVMDRA 581
+LF DE+DA+T KR + R++ QLL +D + V VIGATNRPD +D A
Sbjct: 354 VLFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPA 413
Query: 582 VLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
+ R GRF + + + +P R IL+ L RK + ++ +A
Sbjct: 414 LRRAGRFDREICLGIPDEASRERILQTLCRKLRLPETFPFRHLA 457
Score = 39 (18.8 bits), Expect = 5.8e-122, Sum P(2) = 5.8e-122
Identities = 9/12 (75%), Positives = 10/12 (83%)
Query: 3 LEDEHV-KRRRQ 13
LEDEH+ KR RQ
Sbjct: 78 LEDEHLAKRARQ 89
>UNIPROTKB|F1MIM8 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016235 "aggresome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0005730 GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:DAAA02042637 EMBL:DAAA02042638
IPI:IPI00715498 Ensembl:ENSBTAT00000047473 Uniprot:F1MIM8
Length = 855
Score = 1182 (421.1 bits), Expect = 4.1e-120, P = 4.1e-120
Identities = 261/604 (43%), Positives = 361/604 (59%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
+F+D+GG ++ L+E+ +++V + HP++ LGV P G+LL+GPPGCGKT LAHAIA E
Sbjct: 262 KFEDVGGNDTTLKEV-CKMLVHMRHPEVYHHLGVIPPRGVLLHGPPGCGKTLLAHAIAGE 320
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREME 241
+P K++ATE+VSGVSG SE+ +R+LF +A +AP I+FIDEIDAI KRE ++ME
Sbjct: 321 LDLPILKVAATEIVSGVSGESEQKLRELFEQAVSSAPCILFIDEIDAITPKREIASKDME 380
Query: 242 RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFD 301
RRIV QL+TCMD+ + + VLVIGATNRPD++DPALRR GRFD
Sbjct: 381 RRIVAQLLTCMDDLNNVAATAR--------------VLVIGATNRPDSLDPALRRAGRFD 426
Query: 302 REIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXXMK 361
REI LG+PDE +R +IL L R LR+ +F +A TPGFV +
Sbjct: 427 REICLGIPDEASRERILQTLCRKLRLPETFHFRHLAHLTPGFVGADLMALCREAAMCAVN 486
Query: 362 RII----DQRKS--------------ELSGNSIAEQHSDDWWR--------QPWLPEEME 395
R++ Q K E +G + ++ R P E+++
Sbjct: 487 RVLMELQGQHKKNPEIEASPSEGDQEERTGAEPTSKTQEELQRLLGLLRNQDPLSEEQLK 546
Query: 396 RLTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEY 455
L I + DF A VQPS++REGF+ +PNV W D+G L+ +R E I+ + P+++
Sbjct: 547 GLCIELNDFIVALSSVQPSAKREGFATVPNVTWADIGALEDIREELTMAILFLLCNPDQF 606
Query: 456 EEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLF 515
G+ G LL GPPGCGKTL+AKAVANE+G NFI +KGPELLN YVGESE AVR +F
Sbjct: 607 RVLGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVF 666
Query: 516 SRARTCSPCILFFDEVDALTTKRG-KEGGWVVERLLNQLLIELDGADKRKGVFVIGATNR 574
RA+ +PC++FFDEVDAL +R +E G V R++NQLL E+DG + R+ VF++ ATNR
Sbjct: 667 QRAKNSAPCVIFFDEVDALCPRRSARETGASV-RVVNQLLTEMDGLETRQQVFIMAATNR 725
Query: 575 PDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALAR---KKPIDDSVDLHTIAQSKFCE 631
PD++D A+LRPGR K L+V LP P +R IL+ + + K P+D V+L IA C+
Sbjct: 726 PDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCD 785
Query: 632 NLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQR 691
+G ++ KS S+ I HFE+A K+ S+S+
Sbjct: 786 CYTGADLSALVREASICALKQEMARQKSGSEKGELKISQKHFEEAFKKVKSSISKEDRAM 845
Query: 692 YKTL 695
Y+ L
Sbjct: 846 YEAL 849
Score = 361 (132.1 bits), Expect = 5.6e-30, P = 5.6e-30
Identities = 85/224 (37%), Positives = 126/224 (56%)
Query: 406 EATKMVQPSSRREGFSA-IPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLET 464
E ++Q ++ +G I +VK+EDVGG D E + +V ++ PE Y GV
Sbjct: 240 EIEAVLQKRAKAKGLELQISSVKFEDVGGNDTTLKEVCKMLVH-MRHPEVYHHLGVIPPR 298
Query: 465 GFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPC 524
G LL+GPPGCGKTL+A A+A E + + E+++ GESE +R LF +A + +PC
Sbjct: 299 GVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEIVSGVSGESEQKLRELFEQAVSSAPC 358
Query: 525 ILFFDEVDALTTKRGKEGGWVVERLLNQLLI---ELDGADKRKGVFVIGATNRPDVMDRA 581
ILF DE+DA+T KR + R++ QLL +L+ V VIGATNRPD +D A
Sbjct: 359 ILFIDEIDAITPKREIASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPA 418
Query: 582 VLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
+ R GRF + + + +P R IL+ L RK + ++ +A
Sbjct: 419 LRRAGRFDREICLGIPDEASRERILQTLCRKLRLPETFHFRHLA 462
>ASPGD|ASPL0000062283 [details] [associations]
symbol:AN1366 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:BN001308 HOGENOM:HOG000223225 GO:GO:0017111 OMA:REGFTTI
EnsemblFungi:CADANIAT00001245 Uniprot:C8VRW3
Length = 729
Score = 1150 (409.9 bits), Expect = 1.0e-116, P = 1.0e-116
Identities = 251/525 (47%), Positives = 328/525 (62%)
Query: 125 DLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGV 184
DLGG++ V+++L VI+P+ PQ+ V+P G+LL+GPPGCGKT +A+A A E GV
Sbjct: 166 DLGGLDDVVQQLGDLVILPMTRPQVYLASNVQPPRGVLLHGPPGCGKTMIANAFAAELGV 225
Query: 185 PFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRI 244
PF ISA +VSG+SG SE+ +R+ F +A R AP ++FIDEIDAI KREN QREME+RI
Sbjct: 226 PFISISAPSIVSGMSGESEKALREHFEEAKRLAPCLIFIDEIDAITPKRENSQREMEKRI 285
Query: 245 VTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDREI 304
V QL+TCMD+ P V+V+ ATNRPD++D ALRR GRFD+EI
Sbjct: 286 VAQLLTCMDD-----------LALEKTDGKP--VIVLAATNRPDSLDAALRRGGRFDKEI 332
Query: 305 VLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXXMKRII 364
+ VP E R QIL LTR +R+ D +A+ TPGFV +KR +
Sbjct: 333 NMTVPSEPVREQILRALTRKMRLVDDLDFKTLAKRTPGFVGADLNDLVSTAGSTAIKRYL 392
Query: 365 DQRKSELSGNSIAEQHSDDWW-------------RQPWLPEEMERLTITMTDFEEATKMV 411
D KS SG + + DD ++ + E E + ++ DF A +
Sbjct: 393 DLLKSN-SGEEMDIEGQDDLSPSVKELRRLITHAKETPIGSEAEVVLVSNDDFFTALPKI 451
Query: 412 QPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGP 471
QPSS+REGF+ IP+ W D+G L +R E IV IK PE Y G+ TG LL+GP
Sbjct: 452 QPSSKREGFATIPDTTWADIGALSGIRDELATAIVDPIKHPELYASVGITAPTGVLLWGP 511
Query: 472 PGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEV 531
PGCGKTL+AKAVANE+ ANFI +KGPELLNKYVGESE AVR +F RAR+ PC++FFDE+
Sbjct: 512 PGCGKTLLAKAVANESRANFISVKGPELLNKYVGESERAVRQVFVRARSSIPCVIFFDEL 571
Query: 532 DALTTKRGKEGGWVVERLLNQLLIELDG-ADKRKGVFVIGATNRPDVMDRAVLRPGRFGK 590
DAL +R R++N LL ELDG R+G++VI ATNRPD++D A+LRPGR
Sbjct: 572 DALVPRRDDTLSEASARVVNTLLTELDGLGSSRQGIYVIAATNRPDIIDPAMLRPGRLET 631
Query: 591 LLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
LL+V LP+P ER IL+ L R+ PI+ + DL +A+ CE SG
Sbjct: 632 LLFVNLPSPLERVEILQTLVRRLPIEFNEDLRRLAEE--CEGFSG 674
Score = 367 (134.2 bits), Expect = 7.7e-31, P = 7.7e-31
Identities = 87/222 (39%), Positives = 127/222 (57%)
Query: 414 SSRREGFSAI---P--NVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLL 468
S RR+ +A+ P +V D+GGLD + + ++ + P+ Y V G LL
Sbjct: 145 SKRRKAENAVDRSPPTHVSLADLGGLDDVVQQLGDLVILPMTRPQVYLASNVQPPRGVLL 204
Query: 469 YGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFF 528
+GPPGCGKT+IA A A E G FI I P +++ GESE A+R F A+ +PC++F
Sbjct: 205 HGPPGCGKTMIANAFAAELGVPFISISAPSIVSGMSGESEKALREHFEEAKRLAPCLIFI 264
Query: 529 DEVDALTTKRGKEGGWVVERLLNQLLIELD--GADKRKG--VFVIGATNRPDVMDRAVLR 584
DE+DA+T KR + +R++ QLL +D +K G V V+ ATNRPD +D A+ R
Sbjct: 265 DEIDAITPKRENSQREMEKRIVAQLLTCMDDLALEKTDGKPVIVLAATNRPDSLDAALRR 324
Query: 585 PGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 626
GRF K + + +P+ R IL AL RK + D +D T+A+
Sbjct: 325 GGRFDKEINMTVPSEPVREQILRALTRKMRLVDDLDFKTLAK 366
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 792 (283.9 bits), Expect = 1.8e-114, Sum P(2) = 1.8e-114
Identities = 172/442 (38%), Positives = 254/442 (57%)
Query: 277 YVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKI 336
+V+V+GATNRP+++DPALRR GRFDREI +GVPDE R+++L + T+N+++ DL +I
Sbjct: 343 HVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERI 402
Query: 337 ARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMER 396
++ T G+V ++ +D +L +SI D E +
Sbjct: 403 SKDTHGYVGADLAALCTEAALQCIREKMDV--IDLEDDSI------D-------AEILNS 447
Query: 397 LTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
+ +T F A PS+ RE +PNV W D+GGL+ ++ E + ++ PE++E
Sbjct: 448 MAVTNEHFHTALGNSNPSALRETVVEVPNVSWNDIGGLENVKRELQETVQYPVEHPEKFE 507
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
+FG+ G L YGPPGCGKTL+AKA+ANE ANFI +KGPELL + GESE VR +F
Sbjct: 508 KFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFD 567
Query: 517 RARTCSPCILFFDEVDALTTKRGK----EGGWVVERLLNQLLIELDGADKRKGVFVIGAT 572
+AR +PC+LFFDE+D++ T+RG +GG +R+LNQLL E+DG + +K VF+IGAT
Sbjct: 568 KARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGAT 627
Query: 573 NRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCEN 632
NRPD++D A+LRPGR +L+Y+PLP D R I +A RK PI VD+ +A K+ +
Sbjct: 628 NRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALA--KYTQG 685
Query: 633 LSGXXXXXXXXXXXXXXXXXKL---ISSKSSSDVTPFT-----------IKLTHFEQALS 678
SG + I + P IK HFE+++
Sbjct: 686 FSGADITEICQRACKYAIRENIEKDIEKEKRRSENPEAMEEDGVDEVSEIKAAHFEESMK 745
Query: 679 KISPSVSELQIQRYKTLSETFK 700
SVS+ I++Y+ ++T +
Sbjct: 746 YARRSVSDADIRKYQAFAQTLQ 767
Score = 387 (141.3 bits), Expect = 5.5e-33, P = 5.5e-33
Identities = 85/213 (39%), Positives = 125/213 (58%)
Query: 416 RREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCG 475
+RE + +V ++DVGG+ + + ++ P+ ++ GV G LLYGPPG G
Sbjct: 194 KREDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSG 253
Query: 476 KTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALT 535
KTLIA+AVANE GA F I GPE+++K GESE +R F A +P I+F DE+D++
Sbjct: 254 KTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 313
Query: 536 TKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVP 595
KR K G V R+++QLL +DG R V V+GATNRP+ +D A+ R GRF + +
Sbjct: 314 PKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDR--EID 371
Query: 596 LPTPDERGL--ILEALARKKPIDDSVDLHTIAQ 626
+ PDE G +L + + + VDL I++
Sbjct: 372 IGVPDEIGRLEVLRIHTKNMKLAEDVDLERISK 404
Score = 372 (136.0 bits), Expect = 2.8e-31, P = 2.8e-31
Identities = 86/225 (38%), Positives = 126/225 (56%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+E+V EL+ V P+ HP+ + G+ P G+L YGPPGCGKT LA AIANE
Sbjct: 479 WNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC 538
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQRE--- 239
F + E+++ G SE N+R++F KA ++AP ++F DE+D+IA++R
Sbjct: 539 QANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGDGG 598
Query: 240 -MERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPG 298
R++ QL+T MD G V +IGATNRPD +D AL RPG
Sbjct: 599 GAADRVLNQLLTEMD--------GMNAKKT---------VFIIGATNRPDIIDSALLRPG 641
Query: 299 RFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
R D+ I + +PDE++R+ I R + D+ +A+ T GF
Sbjct: 642 RLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGF 686
Score = 357 (130.7 bits), Expect = 1.8e-114, Sum P(2) = 1.8e-114
Identities = 69/131 (52%), Positives = 96/131 (73%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+ + +++ V +PL HPQL + +GV+P GILLYGPPG GKT +A A+ANET
Sbjct: 206 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 265
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
G F+ I+ E++S ++G SE N+R F +A + APSI+FIDEID+IA KRE E+ER
Sbjct: 266 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVER 325
Query: 243 RIVTQLMTCMD 253
RIV+QL+T MD
Sbjct: 326 RIVSQLLTLMD 336
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 784 (281.0 bits), Expect = 1.3e-113, Sum P(2) = 1.3e-113
Identities = 168/440 (38%), Positives = 254/440 (57%)
Query: 277 YVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKI 336
+V+V+GATNRP+++DPALRR GRFDREI +GVPDE R+++L + T+N+++ DL ++
Sbjct: 344 HVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERV 403
Query: 337 ARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMER 396
++ T G+V ++ +D +L I D E +
Sbjct: 404 SKDTHGYVGADLAALCTEAALQCIREKMDV--IDLDDEEI------D-------AEILNS 448
Query: 397 LTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
+ ++ F+ A PS+ RE +PNV WED+GGL+ ++ E + ++ PE++E
Sbjct: 449 MAVSNDHFQTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFE 508
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
+FG+ G L YGPPGCGKTL+AKA+ANE ANFI IKGPELL + GESE VR +F
Sbjct: 509 KFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFD 568
Query: 517 RARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
+AR +PC+LFFDE+D++ T+RG + G +R+LNQLL E+DG + +K VF+IGATN
Sbjct: 569 KARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATN 628
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENL 633
RPD++D A+LRPGR +L+Y+PLP + R I ++ RK P+ VDL +A K+ +
Sbjct: 629 RPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALA--KYTQGF 686
Query: 634 SGXXXXXXXXXXXXXXXXXKL---ISSKSSSDVTPFT----------IKLTHFEQALSKI 680
SG + I + +P IK HFE+++
Sbjct: 687 SGADITEICQRSCKYAIRENIEKDIEKERKRAESPEAMEEDEEEIAEIKAGHFEESMKYA 746
Query: 681 SPSVSELQIQRYKTLSETFK 700
SVS+ I++Y+ ++T +
Sbjct: 747 RRSVSDADIRKYQAFAQTLQ 766
Score = 398 (145.2 bits), Expect = 3.0e-34, P = 3.0e-34
Identities = 92/224 (41%), Positives = 129/224 (57%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++D+GG+E+V EL+ V P+ HP+ + G+ P G+L YGPPGCGKT LA AIANE
Sbjct: 480 WEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC 539
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREM-- 240
F I E+++ G SE N+R++F KA ++AP ++F DE+D+IA++R N +
Sbjct: 540 QANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGG 599
Query: 241 -ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
R++ QL+T MD G V +IGATNRPD +DPAL RPGR
Sbjct: 600 AADRVLNQLLTEMD--------GMNAKKT---------VFIIGATNRPDIIDPALLRPGR 642
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
D+ I + +PDE +R QI R V DL +A+ T GF
Sbjct: 643 LDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGF 686
Score = 383 (139.9 bits), Expect = 1.6e-32, P = 1.6e-32
Identities = 84/213 (39%), Positives = 124/213 (58%)
Query: 416 RREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCG 475
+RE + V ++DVGG+ + + ++ P+ ++ GV G LLYGPPG G
Sbjct: 195 KREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSG 254
Query: 476 KTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALT 535
KTLIA+AVANE GA F I GPE+++K GESE +R F A +P I+F DE+D++
Sbjct: 255 KTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 314
Query: 536 TKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVP 595
KR K G V R+++QLL +DG R V V+GATNRP+ +D A+ R GRF + +
Sbjct: 315 PKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDR--EID 372
Query: 596 LPTPDERGL--ILEALARKKPIDDSVDLHTIAQ 626
+ PDE G +L + + + VDL +++
Sbjct: 373 IGVPDEIGRLEVLRIHTKNMKLAEDVDLERVSK 405
Score = 357 (130.7 bits), Expect = 1.3e-113, Sum P(2) = 1.3e-113
Identities = 69/131 (52%), Positives = 96/131 (73%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+ + +++ V +PL HPQL + +GV+P GILLYGPPG GKT +A A+ANET
Sbjct: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
G F+ I+ E++S ++G SE N+R F +A + APSI+FIDEID+IA KRE E+ER
Sbjct: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVER 326
Query: 243 RIVTQLMTCMD 253
RIV+QL+T MD
Sbjct: 327 RIVSQLLTLMD 337
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 784 (281.0 bits), Expect = 1.3e-113, Sum P(2) = 1.3e-113
Identities = 169/442 (38%), Positives = 255/442 (57%)
Query: 277 YVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKI 336
+V+V+GATNRP+++DPALRR GRFDREI +GVPDE R+++L + T+N+++ DL +I
Sbjct: 343 HVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERI 402
Query: 337 ARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMER 396
++ T G+V ++ +D +L +SI D E +
Sbjct: 403 SKDTHGYVGADLAALCTEAALQCIREKMDV--IDLEDDSI------D-------AEILNS 447
Query: 397 LTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
+ ++ F A PS+ RE +PNV WED+GGL+ ++ E + ++ PE++E
Sbjct: 448 MAVSNEHFHTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFE 507
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
+FG+ G L YGPPGCGKTL+AKA+ANE ANFI +KGPELL + GESE VR +F
Sbjct: 508 KFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFD 567
Query: 517 RARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
+AR +PC+LFFDE+D++ T+RG + G +R+LNQLL E+DG + +K VF+IGATN
Sbjct: 568 KARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATN 627
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENL 633
RPD++D A+LRPGR +L+Y+PLP D R I +A RK P+ VD+ +A K+ +
Sbjct: 628 RPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALA--KYTQGF 685
Query: 634 SGXXXXXXXXXXXXXXXXXKL---ISSKSSSDVTPFT------------IKLTHFEQALS 678
SG + I ++ P I+ HFE+++
Sbjct: 686 SGADITEICQRACKYAIRENIEKDIENERRRSQNPEAMEEDMVDDEVSEIRAAHFEESMK 745
Query: 679 KISPSVSELQIQRYKTLSETFK 700
SVS+ I++Y+ ++T +
Sbjct: 746 YARRSVSDADIRKYQAFAQTLQ 767
Score = 390 (142.3 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 88/224 (39%), Positives = 129/224 (57%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++D+GG+E+V EL+ V P+ HP+ + G+ P G+L YGPPGCGKT LA AIANE
Sbjct: 479 WEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC 538
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREM-- 240
F + E+++ G SE N+R++F KA ++AP ++F DE+D+IA++R N +
Sbjct: 539 QANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDAGG 598
Query: 241 -ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
R++ QL+T MD G V +IGATNRPD +D AL RPGR
Sbjct: 599 AADRVLNQLLTEMD--------GMNAKKT---------VFIIGATNRPDIIDSALLRPGR 641
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
D+ I + +PDE++R+ I R V D+ +A+ T GF
Sbjct: 642 LDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGF 685
Score = 386 (140.9 bits), Expect = 7.2e-33, P = 7.2e-33
Identities = 85/213 (39%), Positives = 124/213 (58%)
Query: 416 RREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCG 475
+RE + V ++DVGG+ + + ++ P+ ++ GV G LLYGPPG G
Sbjct: 194 KREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSG 253
Query: 476 KTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALT 535
KTLIA+AVANE GA F I GPE+++K GESE +R F A +P I+F DE+D++
Sbjct: 254 KTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 313
Query: 536 TKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVP 595
KR K G V R+++QLL +DG R V V+GATNRP+ +D A+ R GRF + +
Sbjct: 314 PKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDR--EID 371
Query: 596 LPTPDERGL--ILEALARKKPIDDSVDLHTIAQ 626
+ PDE G +L + + + VDL I++
Sbjct: 372 IGVPDEIGRLEVLRIHTKNMKLAEDVDLERISK 404
Score = 357 (130.7 bits), Expect = 1.3e-113, Sum P(2) = 1.3e-113
Identities = 69/131 (52%), Positives = 96/131 (73%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+ + +++ V +PL HPQL + +GV+P GILLYGPPG GKT +A A+ANET
Sbjct: 206 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 265
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
G F+ I+ E++S ++G SE N+R F +A + APSI+FIDEID+IA KRE E+ER
Sbjct: 266 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVER 325
Query: 243 RIVTQLMTCMD 253
RIV+QL+T MD
Sbjct: 326 RIVSQLLTLMD 336
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 781 (280.0 bits), Expect = 2.6e-113, Sum P(2) = 2.6e-113
Identities = 169/440 (38%), Positives = 249/440 (56%)
Query: 277 YVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKI 336
+V+V+ ATNRP+++DPALRR GRFDRE+ +G+PD R++IL + T+N+++ DL ++
Sbjct: 340 HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQV 399
Query: 337 ARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMER 396
A T G V +++ +D +L +I D E M
Sbjct: 400 ANETHGHVGADLAALCSEAALQAIRKKMDL--IDLEDETI------D-------AEVMNS 444
Query: 397 LTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
L +TM DF A PS+ RE +PN+ WED+GGLD ++ E + ++ P+++
Sbjct: 445 LAVTMDDFRWALSQSNPSALRETVVEVPNITWEDIGGLDDVKRELQELVQYPVEHPDKFL 504
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
+FG+ G L YGPPGCGKTL+AKA+ANE ANFI IKGPELL + GESE VR +F
Sbjct: 505 KFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFD 564
Query: 517 RARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
+AR +PC+LFFDE+D++ RG +GG +R++NQ+L E+DG +K VF+IGATN
Sbjct: 565 KARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGATN 624
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ------- 626
RPD++D A+LRPGR +L+Y+PLP R IL+A RK PI VDL +A+
Sbjct: 625 RPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPISKDVDLDFLAKMTNGFSG 684
Query: 627 ---SKFCENLSGXXXXXXXXXXXXXXXXXKLISSK---SSSDVTPFTIKLTHFEQALSKI 680
++ C+ + S D P I+ HFE+A+
Sbjct: 685 ADLTEICQRACKLAIRESIENEIRRERERQTNPSAMEVEEDDPVP-EIRKDHFEEAMRFA 743
Query: 681 SPSVSELQIQRYKTLSETFK 700
SVS+ I++Y+ ++T +
Sbjct: 744 RRSVSDNDIRKYEMFAQTLQ 763
Score = 387 (141.3 bits), Expect = 5.5e-33, P = 5.5e-33
Identities = 84/214 (39%), Positives = 124/214 (57%)
Query: 412 QPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGP 471
+P R + ++ V ++D+GG+ + + ++ P ++ GV G LLYGP
Sbjct: 187 EPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGP 246
Query: 472 PGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEV 531
PG GKTLIA+AVANE GA F I GPE+++K GESE +R F A +P I+F DE+
Sbjct: 247 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEL 306
Query: 532 DALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKL 591
DA+ KR K G V R+++QLL +DG +R V V+ ATNRP+ +D A+ R GRF +
Sbjct: 307 DAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 366
Query: 592 LYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
+ + +P R IL+ + + D VDL +A
Sbjct: 367 VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVA 400
Score = 377 (137.8 bits), Expect = 7.5e-32, P = 7.5e-32
Identities = 103/312 (33%), Positives = 151/312 (48%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++D+GG++ V EL+ V P+ HP G+ P G+L YGPPGCGKT LA AIANE
Sbjct: 476 WEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 535
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQRE--- 239
F I E+++ G SE N+R++F KA + AP ++F DE+D+IA R +
Sbjct: 536 QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGG 595
Query: 240 MERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
R++ Q++T MD G V +IGATNRPD +DPA+ RPGR
Sbjct: 596 AADRVINQILTEMD--------GMSSKKN---------VFIIGATNRPDIIDPAILRPGR 638
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXX 359
D+ I + +PDE +R+ IL R + DL +A+ T GF
Sbjct: 639 LDQLIYIPLPDEKSRIAILKANLRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLA 698
Query: 360 MKRIID---QRKSELSGN-SIAEQHSDD---WWRQPWLPEEME--RLTITMTDFEEATKM 410
++ I+ +R+ E N S E DD R+ E M R +++ D +
Sbjct: 699 IRESIENEIRRERERQTNPSAMEVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMF 758
Query: 411 VQPSSRREGFSA 422
Q + GF +
Sbjct: 759 AQTLQQSRGFGS 770
Score = 357 (130.7 bits), Expect = 2.6e-113, Sum P(2) = 2.6e-113
Identities = 69/131 (52%), Positives = 95/131 (72%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+ L ++K V +PL HP L + +GV+P GILLYGPPG GKT +A A+ANET
Sbjct: 203 YDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
G F+ I+ E++S ++G SE N+R F +A + AP+I+FIDE+DAIA KRE E+ER
Sbjct: 263 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER 322
Query: 243 RIVTQLMTCMD 253
RIV+QL+T MD
Sbjct: 323 RIVSQLLTLMD 333
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 754 (270.5 bits), Expect = 2.3e-112, Sum P(2) = 2.3e-112
Identities = 161/438 (36%), Positives = 246/438 (56%)
Query: 277 YVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKI 336
+V+V+GATNRP+++DPALRR GRFDREI + +PD R++I+ + T+N++++ + DL +
Sbjct: 338 HVIVMGATNRPNSIDPALRRFGRFDREIDITIPDATGRLEIMRIHTKNMKLDETVDLEAV 397
Query: 337 ARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMER 396
A T G+V ++ +D +L +I+ E +E
Sbjct: 398 ANETHGYVGADLAALCTESALQCIREKMDV--IDLEDETISA-------------EILES 442
Query: 397 LTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
+++T F A + PS+ RE +P WED+GGL+ ++ E + ++ PE++
Sbjct: 443 MSVTQDHFRTALTLSNPSALRETVVEVPTTTWEDIGGLEGVKRELRETVQYPVEHPEKFR 502
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
+FG+ G L YGPPGCGKTL+AKA+ANE ANFI IKGPELL + GESE VR LF
Sbjct: 503 KFGMQPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRELFD 562
Query: 517 RARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
+AR +PC+LFFDE+D++ RG + G +R++NQ+L E+DG + +K VF+IGATN
Sbjct: 563 KARQAAPCVLFFDELDSIARSRGSSQGDAGGAGDRVINQILTEMDGMNAKKNVFIIGATN 622
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ------- 626
RPD++D A+LRPGR +L+Y+PLP R IL+A K P+ VDL + Q
Sbjct: 623 RPDIIDPAILRPGRLDQLIYIPLPDLPSRVAILKACLNKSPVAKDVDLEFLGQKTQGFSG 682
Query: 627 ---SKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSD--VTPFT-IKLTHFEQALSKI 680
++ C+ + D V P I HF++A+
Sbjct: 683 ADLTEICQRACKLAIRESIEKDIESTKARQESGDTKMEDDSVDPVPEITRDHFQEAMRSA 742
Query: 681 SPSVSELQIQRYKTLSET 698
SVS+ I++Y++ ++T
Sbjct: 743 RRSVSDNDIRKYESFAQT 760
Score = 403 (146.9 bits), Expect = 7.3e-35, P = 7.3e-35
Identities = 83/210 (39%), Positives = 125/210 (59%)
Query: 416 RREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCG 475
+RE + V ++D+GG+ + + ++ P+ ++ GV G LLYGPPGCG
Sbjct: 189 KREDEDRLDEVGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCG 248
Query: 476 KTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALT 535
KT+IA+AVANE GA F I GPE+++K GESE +R F A +P I+F DE+D++
Sbjct: 249 KTMIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 308
Query: 536 TKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVP 595
KR K G V R+++QLL +DG R V V+GATNRP+ +D A+ R GRF + + +
Sbjct: 309 PKREKTQGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIT 368
Query: 596 LPTPDERGLILEALARKKPIDDSVDLHTIA 625
+P R I+ + +D++VDL +A
Sbjct: 369 IPDATGRLEIMRIHTKNMKLDETVDLEAVA 398
Score = 381 (139.2 bits), Expect = 2.5e-32, P = 2.5e-32
Identities = 89/224 (39%), Positives = 125/224 (55%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++D+GG+E V EL+ V P+ HP+ + G++P G+L YGPPGCGKT LA AIANE
Sbjct: 474 WEDIGGLEGVKRELRETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLLAKAIANEC 533
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F I E+++ G SE N+R+LF KA + AP ++F DE+D+IA R + Q +
Sbjct: 534 QANFISIKGPELLTMWFGESEANVRELFDKARQAAPCVLFFDELDSIARSRGSSQGDAGG 593
Query: 243 ---RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
R++ Q++T MD G V +IGATNRPD +DPA+ RPGR
Sbjct: 594 AGDRVINQILTEMD--------GMNAKKN---------VFIIGATNRPDIIDPAILRPGR 636
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
D+ I + +PD +RV IL V DL + + T GF
Sbjct: 637 LDQLIYIPLPDLPSRVAILKACLNKSPVAKDVDLEFLGQKTQGF 680
Score = 375 (137.1 bits), Expect = 2.3e-112, Sum P(2) = 2.3e-112
Identities = 72/131 (54%), Positives = 98/131 (74%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+ L +++ V +PL HPQL + +GV+P GILLYGPPGCGKT +A A+ANET
Sbjct: 201 YDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAVANET 260
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
G F+ I+ E++S ++G SE N+R F +A + APSI+FIDEID+IA KRE Q E+ER
Sbjct: 261 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTQGEVER 320
Query: 243 RIVTQLMTCMD 253
RIV+QL+T MD
Sbjct: 321 RIVSQLLTLMD 331
>FB|FBgn0016983 [details] [associations]
symbol:smid "smallminded" species:7227 "Drosophila
melanogaster" [GO:0016887 "ATPase activity" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0022008 GO:GO:0016887 HSSP:Q01853
KO:K14571 GeneTree:ENSGT00570000079239 UniGene:Dm.875 GeneID:38824
KEGG:dme:Dmel_CG8571 CTD:38824 FlyBase:FBgn0016983 GenomeRNAi:38824
NextBio:810567 RefSeq:NP_523959.2 ProteinModelPortal:Q9VS62
SMR:Q9VS62 IntAct:Q9VS62 MINT:MINT-754496 STRING:Q9VS62
PRIDE:Q9VS62 EnsemblMetazoa:FBtr0076851 UCSC:CG8571-RA
InParanoid:Q9VS62 OMA:EFDSLCP PhylomeDB:Q9VS62 ArrayExpress:Q9VS62
Bgee:Q9VS62 Uniprot:Q9VS62
Length = 944
Score = 670 (240.9 bits), Expect = 4.2e-112, Sum P(2) = 4.2e-112
Identities = 138/318 (43%), Positives = 195/318 (61%)
Query: 391 PEEME--RLTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRR 448
PEE +T+ DF +A K++QPS++REGF +P+ W+D+G L+ +R E ++
Sbjct: 622 PEEFADPNFCLTLIDFVDAIKVMQPSAKREGFITVPDTTWDDIGALEKIREELKLAVLAP 681
Query: 449 IKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESE 508
+K+PE E G+ +G LL GPPGCGKTL+AKA+ANEAG NFI +KGPEL+N YVGESE
Sbjct: 682 VKYPEMLERLGLTAPSGVLLCGPPGCGKTLLAKAIANEAGINFISVKGPELMNMYVGESE 741
Query: 509 LAVRTLFSRARTCSPCILFFDEVDALTTKR--GKEGGWVVERLLNQLLIELDGADKRKGV 566
AVR F RAR +PC++FFDE D+L KR G +G R++NQLL E+DG ++RKGV
Sbjct: 742 RAVRACFQRARNSAPCVIFFDEFDSLCPKRSDGGDGNNSGTRIVNQLLTEMDGVEERKGV 801
Query: 567 FVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALAR--KKPI-DDSVDLHT 623
+++ ATNRPD++D A+LRPGR +LYV P ER IL+A + K+P+ D VDL
Sbjct: 802 YILAATNRPDIIDPAILRPGRLDTILYVGFPEQSERTEILKATTKNGKRPVLADDVDLDE 861
Query: 624 IAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPS 683
IA E +G L + ++ D ++ HF++AL ++ PS
Sbjct: 862 IAAQT--EGYTGADLAGLVKQASMFSLRQSLNNGDTNLD--DLCVRSQHFQEALQQLRPS 917
Query: 684 VSELQIQRYKTLSETFKA 701
V+E + Y L + A
Sbjct: 918 VNEQDRKIYDKLRLKYAA 935
Score = 457 (165.9 bits), Expect = 4.2e-112, Sum P(2) = 4.2e-112
Identities = 108/301 (35%), Positives = 161/301 (53%)
Query: 75 KNIEFEVMPRKIDLVNAKSREVEMKKEESVXXXXXXXXXXXXXXXXPRFQDLGGMESVLE 134
KN+ + +PR D N ++ + +S F+D+GGM+S L+
Sbjct: 202 KNLSEDAVPRSKDHRNVPGLYQQLHQNQSRDRLRKFKRDLEVQHPTESFRDIGGMDSTLK 261
Query: 135 ELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVPFYKISATEV 194
EL E+++ + P+ LG+ P G+LL+GPPGCGKT LA AI+ + +P +I ATE+
Sbjct: 262 EL-CEMLIHIKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLARAISGQLKMPLMEIPATEL 320
Query: 195 VSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIVTQLMTCMDE 254
+ G+SG SEE IR++F +A +P ++FIDEIDAI R+ ++MERRIV+QL++ +D
Sbjct: 321 IGGISGESEERIREVFDQAIGYSPCVLFIDEIDAIGGNRQWASKDMERRIVSQLISSLDN 380
Query: 255 SHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENAR 314
+ + G V+VI AT RPD +DP LRR GRFD EI + +P R
Sbjct: 381 L-KANEFGQS-------------VVVIAATTRPDVLDPGLRRIGRFDHEIAIHIPSRKER 426
Query: 315 VQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGN 374
+IL + L V+ + KIA TPG+V +KR ++ EL
Sbjct: 427 REILRIQCEGLSVDPKLNYDKIAELTPGYVGADLMALVSRAASVAVKRRSMKKFRELHAA 486
Query: 375 S 375
S
Sbjct: 487 S 487
Score = 381 (139.2 bits), Expect = 3.9e-32, P = 3.9e-32
Identities = 88/270 (32%), Positives = 141/270 (52%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+G +E + EELK+ V+ P+ +P++ + LG+ +G+LL GPPGCGKT LA AIANE
Sbjct: 661 WDDIGALEKIREELKLAVLAPVKYPEMLERLGLTAPSGVLLCGPPGCGKTLLAKAIANEA 720
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQ--REM 240
G+ F + E+++ G SE +R F +A +AP ++F DE D++ KR +
Sbjct: 721 GINFISVKGPELMNMYVGESERAVRACFQRARNSAPCVIFFDEFDSLCPKRSDGGDGNNS 780
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRF 300
RIV QL+T MD + G V ++ ATNRPD +DPA+ RPGR
Sbjct: 781 GTRIVNQLLTEMDGVEE--RKG---------------VYILAATNRPDIIDPAILRPGRL 823
Query: 301 DREIVLGVPDENARVQILSVLTRNLR---VEGSFDLVKIARSTPGFVXXXXXXXXXXXXX 357
D + +G P+++ R +IL T+N + + DL +IA T G+
Sbjct: 824 DTILYVGFPEQSERTEILKATTKNGKRPVLADDVDLDEIAAQTEGYTGADLAGLVKQASM 883
Query: 358 XXMKRIIDQRKSELSGNSIAEQHSDDWWRQ 387
+++ ++ + L + QH + +Q
Sbjct: 884 FSLRQSLNNGDTNLDDLCVRSQHFQEALQQ 913
Score = 314 (115.6 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 72/206 (34%), Positives = 109/206 (52%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P + D+GG+D E ++ IK PE Y + G+ G LL+GPPGCGKT +A+A+
Sbjct: 246 PTESFRDIGGMDSTLKELCEMLIH-IKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLARAI 304
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGG 543
+ + + I EL+ GESE +R +F +A SPC+LF DE+DA+ R
Sbjct: 305 SGQLKMPLMEIPATELIGGISGESEERIREVFDQAIGYSPCVLFIDEIDAIGGNRQWASK 364
Query: 544 WVVERLLNQLLIELDGADKRK---GVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
+ R+++QL+ LD + V VI AT RPDV+D + R GRF + + +P+
Sbjct: 365 DMERRIVSQLISSLDNLKANEFGQSVVVIAATTRPDVLDPGLRRIGRFDHEIAIHIPSRK 424
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQ 626
ER IL +D ++ IA+
Sbjct: 425 ERREILRIQCEGLSVDPKLNYDKIAE 450
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 771 (276.5 bits), Expect = 4.9e-112, Sum P(2) = 4.9e-112
Identities = 167/440 (37%), Positives = 248/440 (56%)
Query: 277 YVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKI 336
+V+V+ ATNRP+++DPALRR GRFDRE+ +G+PD R++IL + T+N+++ DL ++
Sbjct: 340 HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQV 399
Query: 337 ARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMER 396
A T G V +++ +D +L +I D E M
Sbjct: 400 ANETHGHVGADLAALCSEAALQAIRKKMDL--IDLEDETI------D-------AEVMNS 444
Query: 397 LTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
L +TM DF A PS+ RE +P V WED+GGL+ ++ E + ++ P+++
Sbjct: 445 LAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFL 504
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
+FG+ G L YGPPGCGKTL+AKA+ANE ANFI IKGPELL + GESE VR +F
Sbjct: 505 KFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFD 564
Query: 517 RARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
+AR +PC+LFFDE+D++ RG +GG +R++NQ+L E+DG +K VF+IGATN
Sbjct: 565 KARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATN 624
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ------- 626
RPD++D A+LRPGR +L+Y+PLP R IL+A RK P+ VDL +A+
Sbjct: 625 RPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSG 684
Query: 627 ---SKFCENLSGXXXXXXXXXXXXXXXXXKLISSK---SSSDVTPFTIKLTHFEQALSKI 680
++ C+ + S D P I+ HFE+A+
Sbjct: 685 ADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVP-EIRRDHFEEAMRFA 743
Query: 681 SPSVSELQIQRYKTLSETFK 700
SVS+ I++Y+ ++T +
Sbjct: 744 RRSVSDNDIRKYEMFAQTLQ 763
Score = 385 (140.6 bits), Expect = 9.3e-33, P = 9.3e-33
Identities = 84/214 (39%), Positives = 123/214 (57%)
Query: 412 QPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGP 471
+P R + ++ V ++D+GG + + ++ P ++ GV G LLYGP
Sbjct: 187 EPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGP 246
Query: 472 PGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEV 531
PG GKTLIA+AVANE GA F I GPE+++K GESE +R F A +P I+F DE+
Sbjct: 247 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEL 306
Query: 532 DALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKL 591
DA+ KR K G V R+++QLL +DG +R V V+ ATNRP+ +D A+ R GRF +
Sbjct: 307 DAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 366
Query: 592 LYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
+ + +P R IL+ + + D VDL +A
Sbjct: 367 VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVA 400
Score = 382 (139.5 bits), Expect = 2.0e-32, P = 2.0e-32
Identities = 107/312 (34%), Positives = 152/312 (48%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++D+GG+E V EL+ V P+ HP G+ P G+L YGPPGCGKT LA AIANE
Sbjct: 476 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 535
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE-NLQRE-- 239
F I E+++ G SE N+R++F KA + AP ++F DE+D+IA R N+
Sbjct: 536 QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGG 595
Query: 240 MERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
R++ Q++T MD G V +IGATNRPD +DPA+ RPGR
Sbjct: 596 AADRVINQILTEMD--------GMSTKKN---------VFIIGATNRPDIIDPAILRPGR 638
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXX 359
D+ I + +PDE +RV IL R V DL +A+ T GF
Sbjct: 639 LDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLA 698
Query: 360 MKRIID---QRKSELSGN-SIAEQHSDD---WWRQPWLPEEME--RLTITMTDFEEATKM 410
++ I+ +R+ E N S E DD R+ E M R +++ D +
Sbjct: 699 IRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMF 758
Query: 411 VQPSSRREGFSA 422
Q + GF +
Sbjct: 759 AQTLQQSRGFGS 770
Score = 355 (130.0 bits), Expect = 4.9e-112, Sum P(2) = 4.9e-112
Identities = 69/131 (52%), Positives = 94/131 (71%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG L ++K V +PL HP L + +GV+P GILLYGPPG GKT +A A+ANET
Sbjct: 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
G F+ I+ E++S ++G SE N+R F +A + AP+I+FIDE+DAIA KRE E+ER
Sbjct: 263 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER 322
Query: 243 RIVTQLMTCMD 253
RIV+QL+T MD
Sbjct: 323 RIVSQLLTLMD 333
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 771 (276.5 bits), Expect = 4.9e-112, Sum P(2) = 4.9e-112
Identities = 167/440 (37%), Positives = 248/440 (56%)
Query: 277 YVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKI 336
+V+V+ ATNRP+++DPALRR GRFDRE+ +G+PD R++IL + T+N+++ DL ++
Sbjct: 340 HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQV 399
Query: 337 ARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMER 396
A T G V +++ +D +L +I D E M
Sbjct: 400 ANETHGHVGADLAALCSEAALQAIRKKMDL--IDLEDETI------D-------AEVMNS 444
Query: 397 LTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
L +TM DF A PS+ RE +P V WED+GGL+ ++ E + ++ P+++
Sbjct: 445 LAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFL 504
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
+FG+ G L YGPPGCGKTL+AKA+ANE ANFI IKGPELL + GESE VR +F
Sbjct: 505 KFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFD 564
Query: 517 RARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
+AR +PC+LFFDE+D++ RG +GG +R++NQ+L E+DG +K VF+IGATN
Sbjct: 565 KARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATN 624
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ------- 626
RPD++D A+LRPGR +L+Y+PLP R IL+A RK P+ VDL +A+
Sbjct: 625 RPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSG 684
Query: 627 ---SKFCENLSGXXXXXXXXXXXXXXXXXKLISSK---SSSDVTPFTIKLTHFEQALSKI 680
++ C+ + S D P I+ HFE+A+
Sbjct: 685 ADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVP-EIRRDHFEEAMRFA 743
Query: 681 SPSVSELQIQRYKTLSETFK 700
SVS+ I++Y+ ++T +
Sbjct: 744 RRSVSDNDIRKYEMFAQTLQ 763
Score = 385 (140.6 bits), Expect = 9.3e-33, P = 9.3e-33
Identities = 84/214 (39%), Positives = 123/214 (57%)
Query: 412 QPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGP 471
+P R + ++ V ++D+GG + + ++ P ++ GV G LLYGP
Sbjct: 187 EPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGP 246
Query: 472 PGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEV 531
PG GKTLIA+AVANE GA F I GPE+++K GESE +R F A +P I+F DE+
Sbjct: 247 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEL 306
Query: 532 DALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKL 591
DA+ KR K G V R+++QLL +DG +R V V+ ATNRP+ +D A+ R GRF +
Sbjct: 307 DAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 366
Query: 592 LYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
+ + +P R IL+ + + D VDL +A
Sbjct: 367 VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVA 400
Score = 382 (139.5 bits), Expect = 2.0e-32, P = 2.0e-32
Identities = 107/312 (34%), Positives = 152/312 (48%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++D+GG+E V EL+ V P+ HP G+ P G+L YGPPGCGKT LA AIANE
Sbjct: 476 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 535
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE-NLQRE-- 239
F I E+++ G SE N+R++F KA + AP ++F DE+D+IA R N+
Sbjct: 536 QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGG 595
Query: 240 MERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
R++ Q++T MD G V +IGATNRPD +DPA+ RPGR
Sbjct: 596 AADRVINQILTEMD--------GMSTKKN---------VFIIGATNRPDIIDPAILRPGR 638
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXX 359
D+ I + +PDE +RV IL R V DL +A+ T GF
Sbjct: 639 LDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLA 698
Query: 360 MKRIID---QRKSELSGN-SIAEQHSDD---WWRQPWLPEEME--RLTITMTDFEEATKM 410
++ I+ +R+ E N S E DD R+ E M R +++ D +
Sbjct: 699 IRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMF 758
Query: 411 VQPSSRREGFSA 422
Q + GF +
Sbjct: 759 AQTLQQSRGFGS 770
Score = 355 (130.0 bits), Expect = 4.9e-112, Sum P(2) = 4.9e-112
Identities = 69/131 (52%), Positives = 94/131 (71%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG L ++K V +PL HP L + +GV+P GILLYGPPG GKT +A A+ANET
Sbjct: 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
G F+ I+ E++S ++G SE N+R F +A + AP+I+FIDE+DAIA KRE E+ER
Sbjct: 263 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER 322
Query: 243 RIVTQLMTCMD 253
RIV+QL+T MD
Sbjct: 323 RIVSQLLTLMD 333
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 771 (276.5 bits), Expect = 4.9e-112, Sum P(2) = 4.9e-112
Identities = 167/440 (37%), Positives = 248/440 (56%)
Query: 277 YVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKI 336
+V+V+ ATNRP+++DPALRR GRFDRE+ +G+PD R++IL + T+N+++ DL ++
Sbjct: 356 HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQV 415
Query: 337 ARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMER 396
A T G V +++ +D +L +I D E M
Sbjct: 416 ANETHGHVGADLAALCSEAALQAIRKKMDL--IDLEDETI------D-------AEVMNS 460
Query: 397 LTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
L +TM DF A PS+ RE +P V WED+GGL+ ++ E + ++ P+++
Sbjct: 461 LAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFL 520
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
+FG+ G L YGPPGCGKTL+AKA+ANE ANFI IKGPELL + GESE VR +F
Sbjct: 521 KFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFD 580
Query: 517 RARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
+AR +PC+LFFDE+D++ RG +GG +R++NQ+L E+DG +K VF+IGATN
Sbjct: 581 KARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATN 640
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ------- 626
RPD++D A+LRPGR +L+Y+PLP R IL+A RK P+ VDL +A+
Sbjct: 641 RPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSG 700
Query: 627 ---SKFCENLSGXXXXXXXXXXXXXXXXXKLISSK---SSSDVTPFTIKLTHFEQALSKI 680
++ C+ + S D P I+ HFE+A+
Sbjct: 701 ADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVP-EIRRDHFEEAMRFA 759
Query: 681 SPSVSELQIQRYKTLSETFK 700
SVS+ I++Y+ ++T +
Sbjct: 760 RRSVSDNDIRKYEMFAQTLQ 779
Score = 385 (140.6 bits), Expect = 9.8e-33, P = 9.8e-33
Identities = 84/214 (39%), Positives = 123/214 (57%)
Query: 412 QPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGP 471
+P R + ++ V ++D+GG + + ++ P ++ GV G LLYGP
Sbjct: 203 EPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGP 262
Query: 472 PGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEV 531
PG GKTLIA+AVANE GA F I GPE+++K GESE +R F A +P I+F DE+
Sbjct: 263 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEL 322
Query: 532 DALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKL 591
DA+ KR K G V R+++QLL +DG +R V V+ ATNRP+ +D A+ R GRF +
Sbjct: 323 DAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 382
Query: 592 LYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
+ + +P R IL+ + + D VDL +A
Sbjct: 383 VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVA 416
Score = 382 (139.5 bits), Expect = 2.2e-32, P = 2.2e-32
Identities = 107/312 (34%), Positives = 152/312 (48%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++D+GG+E V EL+ V P+ HP G+ P G+L YGPPGCGKT LA AIANE
Sbjct: 492 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 551
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE-NLQRE-- 239
F I E+++ G SE N+R++F KA + AP ++F DE+D+IA R N+
Sbjct: 552 QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGG 611
Query: 240 MERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
R++ Q++T MD G V +IGATNRPD +DPA+ RPGR
Sbjct: 612 AADRVINQILTEMD--------GMSTKKN---------VFIIGATNRPDIIDPAILRPGR 654
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXX 359
D+ I + +PDE +RV IL R V DL +A+ T GF
Sbjct: 655 LDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLA 714
Query: 360 MKRIID---QRKSELSGN-SIAEQHSDD---WWRQPWLPEEME--RLTITMTDFEEATKM 410
++ I+ +R+ E N S E DD R+ E M R +++ D +
Sbjct: 715 IRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMF 774
Query: 411 VQPSSRREGFSA 422
Q + GF +
Sbjct: 775 AQTLQQSRGFGS 786
Score = 355 (130.0 bits), Expect = 4.9e-112, Sum P(2) = 4.9e-112
Identities = 69/131 (52%), Positives = 94/131 (71%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG L ++K V +PL HP L + +GV+P GILLYGPPG GKT +A A+ANET
Sbjct: 219 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 278
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
G F+ I+ E++S ++G SE N+R F +A + AP+I+FIDE+DAIA KRE E+ER
Sbjct: 279 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER 338
Query: 243 RIVTQLMTCMD 253
RIV+QL+T MD
Sbjct: 339 RIVSQLLTLMD 349
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 771 (276.5 bits), Expect = 4.9e-112, Sum P(2) = 4.9e-112
Identities = 167/440 (37%), Positives = 248/440 (56%)
Query: 277 YVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKI 336
+V+V+ ATNRP+++DPALRR GRFDRE+ +G+PD R++IL + T+N+++ DL ++
Sbjct: 340 HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQV 399
Query: 337 ARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMER 396
A T G V +++ +D +L +I D E M
Sbjct: 400 ANETHGHVGADLAALCSEAALQAIRKKMDL--IDLEDETI------D-------AEVMNS 444
Query: 397 LTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
L +TM DF A PS+ RE +P V WED+GGL+ ++ E + ++ P+++
Sbjct: 445 LAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFL 504
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
+FG+ G L YGPPGCGKTL+AKA+ANE ANFI IKGPELL + GESE VR +F
Sbjct: 505 KFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFD 564
Query: 517 RARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
+AR +PC+LFFDE+D++ RG +GG +R++NQ+L E+DG +K VF+IGATN
Sbjct: 565 KARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATN 624
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ------- 626
RPD++D A+LRPGR +L+Y+PLP R IL+A RK P+ VDL +A+
Sbjct: 625 RPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSG 684
Query: 627 ---SKFCENLSGXXXXXXXXXXXXXXXXXKLISSK---SSSDVTPFTIKLTHFEQALSKI 680
++ C+ + S D P I+ HFE+A+
Sbjct: 685 ADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVP-EIRRDHFEEAMRFA 743
Query: 681 SPSVSELQIQRYKTLSETFK 700
SVS+ I++Y+ ++T +
Sbjct: 744 RRSVSDNDIRKYEMFAQTLQ 763
Score = 385 (140.6 bits), Expect = 9.3e-33, P = 9.3e-33
Identities = 84/214 (39%), Positives = 123/214 (57%)
Query: 412 QPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGP 471
+P R + ++ V ++D+GG + + ++ P ++ GV G LLYGP
Sbjct: 187 EPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGP 246
Query: 472 PGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEV 531
PG GKTLIA+AVANE GA F I GPE+++K GESE +R F A +P I+F DE+
Sbjct: 247 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEL 306
Query: 532 DALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKL 591
DA+ KR K G V R+++QLL +DG +R V V+ ATNRP+ +D A+ R GRF +
Sbjct: 307 DAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 366
Query: 592 LYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
+ + +P R IL+ + + D VDL +A
Sbjct: 367 VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVA 400
Score = 382 (139.5 bits), Expect = 2.0e-32, P = 2.0e-32
Identities = 107/312 (34%), Positives = 152/312 (48%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++D+GG+E V EL+ V P+ HP G+ P G+L YGPPGCGKT LA AIANE
Sbjct: 476 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 535
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE-NLQRE-- 239
F I E+++ G SE N+R++F KA + AP ++F DE+D+IA R N+
Sbjct: 536 QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGG 595
Query: 240 MERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
R++ Q++T MD G V +IGATNRPD +DPA+ RPGR
Sbjct: 596 AADRVINQILTEMD--------GMSTKKN---------VFIIGATNRPDIIDPAILRPGR 638
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXX 359
D+ I + +PDE +RV IL R V DL +A+ T GF
Sbjct: 639 LDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLA 698
Query: 360 MKRIID---QRKSELSGN-SIAEQHSDD---WWRQPWLPEEME--RLTITMTDFEEATKM 410
++ I+ +R+ E N S E DD R+ E M R +++ D +
Sbjct: 699 IRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMF 758
Query: 411 VQPSSRREGFSA 422
Q + GF +
Sbjct: 759 AQTLQQSRGFGS 770
Score = 355 (130.0 bits), Expect = 4.9e-112, Sum P(2) = 4.9e-112
Identities = 69/131 (52%), Positives = 94/131 (71%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG L ++K V +PL HP L + +GV+P GILLYGPPG GKT +A A+ANET
Sbjct: 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
G F+ I+ E++S ++G SE N+R F +A + AP+I+FIDE+DAIA KRE E+ER
Sbjct: 263 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER 322
Query: 243 RIVTQLMTCMD 253
RIV+QL+T MD
Sbjct: 323 RIVSQLLTLMD 333
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 771 (276.5 bits), Expect = 4.9e-112, Sum P(2) = 4.9e-112
Identities = 167/440 (37%), Positives = 248/440 (56%)
Query: 277 YVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKI 336
+V+V+ ATNRP+++DPALRR GRFDRE+ +G+PD R++IL + T+N+++ DL ++
Sbjct: 340 HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQV 399
Query: 337 ARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMER 396
A T G V +++ +D +L +I D E M
Sbjct: 400 ANETHGHVGADLAALCSEAALQAIRKKMDL--IDLEDETI------D-------AEVMNS 444
Query: 397 LTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
L +TM DF A PS+ RE +P V WED+GGL+ ++ E + ++ P+++
Sbjct: 445 LAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFL 504
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
+FG+ G L YGPPGCGKTL+AKA+ANE ANFI IKGPELL + GESE VR +F
Sbjct: 505 KFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFD 564
Query: 517 RARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
+AR +PC+LFFDE+D++ RG +GG +R++NQ+L E+DG +K VF+IGATN
Sbjct: 565 KARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATN 624
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ------- 626
RPD++D A+LRPGR +L+Y+PLP R IL+A RK P+ VDL +A+
Sbjct: 625 RPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSG 684
Query: 627 ---SKFCENLSGXXXXXXXXXXXXXXXXXKLISSK---SSSDVTPFTIKLTHFEQALSKI 680
++ C+ + S D P I+ HFE+A+
Sbjct: 685 ADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVP-EIRRDHFEEAMRFA 743
Query: 681 SPSVSELQIQRYKTLSETFK 700
SVS+ I++Y+ ++T +
Sbjct: 744 RRSVSDNDIRKYEMFAQTLQ 763
Score = 385 (140.6 bits), Expect = 9.3e-33, P = 9.3e-33
Identities = 84/214 (39%), Positives = 123/214 (57%)
Query: 412 QPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGP 471
+P R + ++ V ++D+GG + + ++ P ++ GV G LLYGP
Sbjct: 187 EPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGP 246
Query: 472 PGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEV 531
PG GKTLIA+AVANE GA F I GPE+++K GESE +R F A +P I+F DE+
Sbjct: 247 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEL 306
Query: 532 DALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKL 591
DA+ KR K G V R+++QLL +DG +R V V+ ATNRP+ +D A+ R GRF +
Sbjct: 307 DAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 366
Query: 592 LYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
+ + +P R IL+ + + D VDL +A
Sbjct: 367 VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVA 400
Score = 382 (139.5 bits), Expect = 2.0e-32, P = 2.0e-32
Identities = 107/312 (34%), Positives = 152/312 (48%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++D+GG+E V EL+ V P+ HP G+ P G+L YGPPGCGKT LA AIANE
Sbjct: 476 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 535
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE-NLQRE-- 239
F I E+++ G SE N+R++F KA + AP ++F DE+D+IA R N+
Sbjct: 536 QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGG 595
Query: 240 MERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
R++ Q++T MD G V +IGATNRPD +DPA+ RPGR
Sbjct: 596 AADRVINQILTEMD--------GMSTKKN---------VFIIGATNRPDIIDPAILRPGR 638
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXX 359
D+ I + +PDE +RV IL R V DL +A+ T GF
Sbjct: 639 LDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLA 698
Query: 360 MKRIID---QRKSELSGN-SIAEQHSDD---WWRQPWLPEEME--RLTITMTDFEEATKM 410
++ I+ +R+ E N S E DD R+ E M R +++ D +
Sbjct: 699 IRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMF 758
Query: 411 VQPSSRREGFSA 422
Q + GF +
Sbjct: 759 AQTLQQSRGFGS 770
Score = 355 (130.0 bits), Expect = 4.9e-112, Sum P(2) = 4.9e-112
Identities = 69/131 (52%), Positives = 94/131 (71%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG L ++K V +PL HP L + +GV+P GILLYGPPG GKT +A A+ANET
Sbjct: 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
G F+ I+ E++S ++G SE N+R F +A + AP+I+FIDE+DAIA KRE E+ER
Sbjct: 263 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER 322
Query: 243 RIVTQLMTCMD 253
RIV+QL+T MD
Sbjct: 323 RIVSQLLTLMD 333
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 771 (276.5 bits), Expect = 4.9e-112, Sum P(2) = 4.9e-112
Identities = 167/440 (37%), Positives = 248/440 (56%)
Query: 277 YVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKI 336
+V+V+ ATNRP+++DPALRR GRFDRE+ +G+PD R++IL + T+N+++ DL ++
Sbjct: 340 HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQV 399
Query: 337 ARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMER 396
A T G V +++ +D +L +I D E M
Sbjct: 400 ANETHGHVGADLAALCSEAALQAIRKKMDL--IDLEDETI------D-------AEVMNS 444
Query: 397 LTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
L +TM DF A PS+ RE +P V WED+GGL+ ++ E + ++ P+++
Sbjct: 445 LAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFL 504
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
+FG+ G L YGPPGCGKTL+AKA+ANE ANFI IKGPELL + GESE VR +F
Sbjct: 505 KFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFD 564
Query: 517 RARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
+AR +PC+LFFDE+D++ RG +GG +R++NQ+L E+DG +K VF+IGATN
Sbjct: 565 KARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATN 624
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ------- 626
RPD++D A+LRPGR +L+Y+PLP R IL+A RK P+ VDL +A+
Sbjct: 625 RPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSG 684
Query: 627 ---SKFCENLSGXXXXXXXXXXXXXXXXXKLISSK---SSSDVTPFTIKLTHFEQALSKI 680
++ C+ + S D P I+ HFE+A+
Sbjct: 685 ADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVP-EIRRDHFEEAMRFA 743
Query: 681 SPSVSELQIQRYKTLSETFK 700
SVS+ I++Y+ ++T +
Sbjct: 744 RRSVSDNDIRKYEMFAQTLQ 763
Score = 385 (140.6 bits), Expect = 9.3e-33, P = 9.3e-33
Identities = 84/214 (39%), Positives = 123/214 (57%)
Query: 412 QPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGP 471
+P R + ++ V ++D+GG + + ++ P ++ GV G LLYGP
Sbjct: 187 EPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGP 246
Query: 472 PGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEV 531
PG GKTLIA+AVANE GA F I GPE+++K GESE +R F A +P I+F DE+
Sbjct: 247 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEL 306
Query: 532 DALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKL 591
DA+ KR K G V R+++QLL +DG +R V V+ ATNRP+ +D A+ R GRF +
Sbjct: 307 DAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 366
Query: 592 LYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
+ + +P R IL+ + + D VDL +A
Sbjct: 367 VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVA 400
Score = 382 (139.5 bits), Expect = 2.0e-32, P = 2.0e-32
Identities = 107/312 (34%), Positives = 152/312 (48%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++D+GG+E V EL+ V P+ HP G+ P G+L YGPPGCGKT LA AIANE
Sbjct: 476 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 535
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE-NLQRE-- 239
F I E+++ G SE N+R++F KA + AP ++F DE+D+IA R N+
Sbjct: 536 QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGG 595
Query: 240 MERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
R++ Q++T MD G V +IGATNRPD +DPA+ RPGR
Sbjct: 596 AADRVINQILTEMD--------GMSTKKN---------VFIIGATNRPDIIDPAILRPGR 638
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXX 359
D+ I + +PDE +RV IL R V DL +A+ T GF
Sbjct: 639 LDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLA 698
Query: 360 MKRIID---QRKSELSGN-SIAEQHSDD---WWRQPWLPEEME--RLTITMTDFEEATKM 410
++ I+ +R+ E N S E DD R+ E M R +++ D +
Sbjct: 699 IRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMF 758
Query: 411 VQPSSRREGFSA 422
Q + GF +
Sbjct: 759 AQTLQQSRGFGS 770
Score = 355 (130.0 bits), Expect = 4.9e-112, Sum P(2) = 4.9e-112
Identities = 69/131 (52%), Positives = 94/131 (71%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG L ++K V +PL HP L + +GV+P GILLYGPPG GKT +A A+ANET
Sbjct: 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
G F+ I+ E++S ++G SE N+R F +A + AP+I+FIDE+DAIA KRE E+ER
Sbjct: 263 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER 322
Query: 243 RIVTQLMTCMD 253
RIV+QL+T MD
Sbjct: 323 RIVSQLLTLMD 333
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 770 (276.1 bits), Expect = 6.2e-112, Sum P(2) = 6.2e-112
Identities = 167/440 (37%), Positives = 248/440 (56%)
Query: 277 YVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKI 336
+V+V+ ATNRP+++DPALRR GRFDRE+ +G+PD R++IL + T+N+++ DL ++
Sbjct: 340 HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQV 399
Query: 337 ARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMER 396
A T G V +++ +D +L +I D E M
Sbjct: 400 ANETHGHVGADLAALCSEAALQAIRKKMDL--IDLEDETI------D-------AEVMNS 444
Query: 397 LTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
L +TM DF A PS+ RE +P V WED+GGL+ ++ E + ++ P+++
Sbjct: 445 LAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFL 504
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
+FG+ G L YGPPGCGKTL+AKA+ANE ANFI IKGPELL + GESE VR +F
Sbjct: 505 KFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFD 564
Query: 517 RARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
+AR +PC+LFFDE+D++ RG +GG +R++NQ+L E+DG +K VF+IGATN
Sbjct: 565 KARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATN 624
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ------- 626
RPD++D A+LRPGR +L+Y+PLP R IL+A RK P+ VDL +A+
Sbjct: 625 RPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPVAKDVDLDFLAKMTNGFSG 684
Query: 627 ---SKFCENLSGXXXXXXXXXXXXXXXXXKLISSK---SSSDVTPFTIKLTHFEQALSKI 680
++ C+ + S D P I+ HFE+A+
Sbjct: 685 ADLTEICQRACKLAIRESIENEIRRERERQTNPSAMEVEEDDPVP-EIRRDHFEEAMRFA 743
Query: 681 SPSVSELQIQRYKTLSETFK 700
SVS+ I++Y+ ++T +
Sbjct: 744 RRSVSDNDIRKYEMFAQTLQ 763
Score = 387 (141.3 bits), Expect = 5.5e-33, P = 5.5e-33
Identities = 84/214 (39%), Positives = 123/214 (57%)
Query: 412 QPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGP 471
+P R + ++ V ++D+GG + + ++ P ++ GV G LLYGP
Sbjct: 187 EPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGP 246
Query: 472 PGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEV 531
PG GKTLIA+AVANE GA F I GPE+++K GESE +R F A +P I+F DE+
Sbjct: 247 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEL 306
Query: 532 DALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKL 591
DA+ KR K G V R+++QLL +DG +R V V+ ATNRP+ +D A+ R GRF +
Sbjct: 307 DAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 366
Query: 592 LYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
+ + +P R IL+ + + D VDL +A
Sbjct: 367 VDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVA 400
Score = 380 (138.8 bits), Expect = 3.4e-32, P = 3.4e-32
Identities = 106/312 (33%), Positives = 152/312 (48%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++D+GG+E V EL+ V P+ HP G+ P G+L YGPPGCGKT LA AIANE
Sbjct: 476 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 535
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE-NLQRE-- 239
F I E+++ G SE N+R++F KA + AP ++F DE+D+IA R N+
Sbjct: 536 QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGG 595
Query: 240 MERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
R++ Q++T MD G V +IGATNRPD +DPA+ RPGR
Sbjct: 596 AADRVINQILTEMD--------GMSTKKN---------VFIIGATNRPDIIDPAILRPGR 638
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXX 359
D+ I + +PDE +R+ IL R V DL +A+ T GF
Sbjct: 639 LDQLIYIPLPDEKSRIAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLA 698
Query: 360 MKRIID---QRKSELSGN-SIAEQHSDD---WWRQPWLPEEME--RLTITMTDFEEATKM 410
++ I+ +R+ E N S E DD R+ E M R +++ D +
Sbjct: 699 IRESIENEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMF 758
Query: 411 VQPSSRREGFSA 422
Q + GF +
Sbjct: 759 AQTLQQSRGFGS 770
Score = 355 (130.0 bits), Expect = 6.2e-112, Sum P(2) = 6.2e-112
Identities = 69/131 (52%), Positives = 94/131 (71%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG L ++K V +PL HP L + +GV+P GILLYGPPG GKT +A A+ANET
Sbjct: 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
G F+ I+ E++S ++G SE N+R F +A + AP+I+FIDE+DAIA KRE E+ER
Sbjct: 263 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER 322
Query: 243 RIVTQLMTCMD 253
RIV+QL+T MD
Sbjct: 323 RIVSQLLTLMD 333
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 769 (275.8 bits), Expect = 7.9e-112, Sum P(2) = 7.9e-112
Identities = 167/440 (37%), Positives = 248/440 (56%)
Query: 277 YVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKI 336
+V+V+ ATNRP+++DPALRR GRFDRE+ +G+PD R++IL + T+N+++ DL ++
Sbjct: 340 HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQV 399
Query: 337 ARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMER 396
A T G V +++ +D +L +I D E M
Sbjct: 400 ANETHGHVGADLAALCSEAALQAIRKKMDL--IDLEDETI------D-------AEVMNS 444
Query: 397 LTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
L +TM DF A PS+ RE +P V WED+GGL+ ++ E + ++ P+++
Sbjct: 445 LAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQDLVQYPVEHPDKFL 504
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
+FG+ G L YGPPGCGKTL+AKA+ANE ANFI IKGPELL + GESE VR +F
Sbjct: 505 KFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFD 564
Query: 517 RARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
+AR +PC+LFFDE+D++ RG +GG +R++NQ+L E+DG +K VF+IGATN
Sbjct: 565 KARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATN 624
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ------- 626
RPD++D A+LRPGR +L+Y+PLP R IL+A RK P+ VDL +A+
Sbjct: 625 RPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSG 684
Query: 627 ---SKFCENLSGXXXXXXXXXXXXXXXXXKLISSK---SSSDVTPFTIKLTHFEQALSKI 680
++ C+ + S D P I+ HFE+A+
Sbjct: 685 ADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVP-EIRRDHFEEAMRFA 743
Query: 681 SPSVSELQIQRYKTLSETFK 700
SVS+ I++Y+ ++T +
Sbjct: 744 RRSVSDNDIRKYEMFAQTLQ 763
Score = 385 (140.6 bits), Expect = 9.3e-33, P = 9.3e-33
Identities = 84/214 (39%), Positives = 123/214 (57%)
Query: 412 QPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGP 471
+P R + ++ V ++D+GG + + ++ P ++ GV G LLYGP
Sbjct: 187 EPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGP 246
Query: 472 PGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEV 531
PG GKTLIA+AVANE GA F I GPE+++K GESE +R F A +P I+F DE+
Sbjct: 247 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEL 306
Query: 532 DALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKL 591
DA+ KR K G V R+++QLL +DG +R V V+ ATNRP+ +D A+ R GRF +
Sbjct: 307 DAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 366
Query: 592 LYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
+ + +P R IL+ + + D VDL +A
Sbjct: 367 VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVA 400
Score = 381 (139.2 bits), Expect = 2.7e-32, P = 2.7e-32
Identities = 107/312 (34%), Positives = 152/312 (48%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++D+GG+E V EL+ V P+ HP G+ P G+L YGPPGCGKT LA AIANE
Sbjct: 476 WEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 535
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE-NLQRE-- 239
F I E+++ G SE N+R++F KA + AP ++F DE+D+IA R N+
Sbjct: 536 QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGG 595
Query: 240 MERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
R++ Q++T MD G V +IGATNRPD +DPA+ RPGR
Sbjct: 596 AADRVINQILTEMD--------GMSTKKN---------VFIIGATNRPDIIDPAILRPGR 638
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXX 359
D+ I + +PDE +RV IL R V DL +A+ T GF
Sbjct: 639 LDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLA 698
Query: 360 MKRIID---QRKSELSGN-SIAEQHSDD---WWRQPWLPEEME--RLTITMTDFEEATKM 410
++ I+ +R+ E N S E DD R+ E M R +++ D +
Sbjct: 699 IRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMF 758
Query: 411 VQPSSRREGFSA 422
Q + GF +
Sbjct: 759 AQTLQQSRGFGS 770
Score = 355 (130.0 bits), Expect = 7.9e-112, Sum P(2) = 7.9e-112
Identities = 69/131 (52%), Positives = 94/131 (71%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG L ++K V +PL HP L + +GV+P GILLYGPPG GKT +A A+ANET
Sbjct: 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
G F+ I+ E++S ++G SE N+R F +A + AP+I+FIDE+DAIA KRE E+ER
Sbjct: 263 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER 322
Query: 243 RIVTQLMTCMD 253
RIV+QL+T MD
Sbjct: 323 RIVSQLLTLMD 333
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 766 (274.7 bits), Expect = 1.6e-111, Sum P(2) = 1.6e-111
Identities = 166/440 (37%), Positives = 248/440 (56%)
Query: 277 YVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKI 336
+V+V+ ATNRP+++DPALRR GRFDRE+ +G+PD R++IL + T+N+++ DL ++
Sbjct: 340 HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQV 399
Query: 337 ARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMER 396
A T G V +++ +D +L +I D E M
Sbjct: 400 ANETHGHVGADLAALCSEAALQAIRKKMDL--IDLEDETI------D-------AEVMNS 444
Query: 397 LTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
L +TM DF A PS+ RE +P V WED+GGL+ ++ E + ++ P+++
Sbjct: 445 LAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFL 504
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
+FG+ G L YGPPGCGKTL+AKA+ANE ANFI IKGPELL + GESE VR +F
Sbjct: 505 KFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFD 564
Query: 517 RARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
+AR +PC+LFFDE+D++ RG +GG +R++NQ+L E+DG +K VF+IGATN
Sbjct: 565 KARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATN 624
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ------- 626
RPD++D A+LRPGR +L+Y+PLP R IL+A RK P+ VD+ +A+
Sbjct: 625 RPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSG 684
Query: 627 ---SKFCENLSGXXXXXXXXXXXXXXXXXKLISSK---SSSDVTPFTIKLTHFEQALSKI 680
++ C+ + S D P I+ HFE+A+
Sbjct: 685 ADLTEICQRACKLAIRESIENEIRRERDRQTNPSAMEVEEDDPVP-EIRRDHFEEAMRFA 743
Query: 681 SPSVSELQIQRYKTLSETFK 700
SVS+ I++Y+ ++T +
Sbjct: 744 RRSVSDNDIRKYEMFAQTLQ 763
Score = 387 (141.3 bits), Expect = 5.5e-33, P = 5.5e-33
Identities = 84/214 (39%), Positives = 123/214 (57%)
Query: 412 QPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGP 471
+P R + ++ V ++D+GG + + ++ P ++ GV G LLYGP
Sbjct: 187 EPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGP 246
Query: 472 PGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEV 531
PG GKTLIA+AVANE GA F I GPE+++K GESE +R F A +P I+F DE+
Sbjct: 247 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEL 306
Query: 532 DALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKL 591
DA+ KR K G V R+++QLL +DG +R V V+ ATNRP+ +D A+ R GRF +
Sbjct: 307 DAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 366
Query: 592 LYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
+ + +P R IL+ + + D VDL +A
Sbjct: 367 VDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVA 400
Score = 371 (135.7 bits), Expect = 3.6e-31, P = 3.6e-31
Identities = 104/312 (33%), Positives = 152/312 (48%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++D+GG+E V EL+ V P+ HP G+ P G+L YGPPGCGKT LA AIANE
Sbjct: 476 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 535
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE-NLQRE-- 239
F I E+++ G SE N+R++F KA + AP ++F DE+D+IA R N+
Sbjct: 536 QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGG 595
Query: 240 MERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
R++ Q++T MD G V +IGATNRPD +DPA+ RPGR
Sbjct: 596 AADRVINQILTEMD--------GMSIKKN---------VFIIGATNRPDIIDPAILRPGR 638
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXX 359
D+ I + +PDE +R+ IL R V D+ +A+ T GF
Sbjct: 639 LDQLIYIPLPDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLA 698
Query: 360 MKRIID---QRKSELSGN-SIAEQHSDD---WWRQPWLPEEME--RLTITMTDFEEATKM 410
++ I+ +R+ + N S E DD R+ E M R +++ D +
Sbjct: 699 IRESIENEIRRERDRQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMF 758
Query: 411 VQPSSRREGFSA 422
Q + GF +
Sbjct: 759 AQTLQQSRGFGS 770
Score = 355 (130.0 bits), Expect = 1.6e-111, Sum P(2) = 1.6e-111
Identities = 69/131 (52%), Positives = 94/131 (71%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG L ++K V +PL HP L + +GV+P GILLYGPPG GKT +A A+ANET
Sbjct: 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
G F+ I+ E++S ++G SE N+R F +A + AP+I+FIDE+DAIA KRE E+ER
Sbjct: 263 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER 322
Query: 243 RIVTQLMTCMD 253
RIV+QL+T MD
Sbjct: 323 RIVSQLLTLMD 333
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 745 (267.3 bits), Expect = 2.8e-111, Sum P(3) = 2.8e-111
Identities = 154/354 (43%), Positives = 221/354 (62%)
Query: 276 GYVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVK 335
G V+VI ATNR +++DPALRR GRFDREI +GVPD+N R +IL + T+N+++ L +
Sbjct: 342 GQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRFEILRIHTKNMKLSPDVKLEE 401
Query: 336 IARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEME 395
+A +T GFV ++ +D E + I ++ E +E
Sbjct: 402 LASNTHGFVGADLAQLCTEAALTCIREKMDVIDLE---DEIIDK------------EVLE 446
Query: 396 RLTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEY 455
+ +T F A PSS RE +PNVKW+D+GGLD ++ I+ I P+++
Sbjct: 447 SMCVTQDHFNMALGTCNPSSLRETVVEVPNVKWDDIGGLDEVKSTLREMILYPIDHPDKF 506
Query: 456 EEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLF 515
E+FG+ G L YGPPGCGKTL+AKAVA+E ANF+ IKGPELL + GESE VR +F
Sbjct: 507 EKFGMSPSRGVLFYGPPGCGKTLLAKAVASECSANFVSIKGPELLTMWFGESEANVREVF 566
Query: 516 SRARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGAT 572
+AR +PC+LFFDE+D++ T+RG +G +R++NQLL E+DG +K +F IGAT
Sbjct: 567 DKARAAAPCVLFFDELDSIGTQRGSSLGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGAT 626
Query: 573 NRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 626
NRP+++D A+LRPGR +L+Y+PLP R IL A+ RK P+ ++V + +AQ
Sbjct: 627 NRPELLDEALLRPGRLDQLIYIPLPDLGARISILTAILRKCPVAENVPIDFLAQ 680
Score = 354 (129.7 bits), Expect = 5.4e-29, Sum P(3) = 5.4e-29
Identities = 79/212 (37%), Positives = 117/212 (55%)
Query: 416 RREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCG 475
+R+ + + ++D+GG + I ++ P ++ GV G LLYGPPG G
Sbjct: 194 KRDDEEKLDEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSG 253
Query: 476 KTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALT 535
KT IA+AVANE GA F I GPE+++K GE+E +R F A SP I+F DE+D++
Sbjct: 254 KTCIARAVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIA 313
Query: 536 TKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVP 595
KR K G V R+++QLL +DG R V VI ATNR + +D A+ R GRF + + +
Sbjct: 314 PKREKTNGEVERRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIG 373
Query: 596 LPTPDERGLILEALARKKPIDDSVDLHTIAQS 627
+P + R IL + + V L +A +
Sbjct: 374 VPDDNGRFEILRIHTKNMKLSPDVKLEELASN 405
Score = 346 (126.9 bits), Expect = 2.7e-28, Sum P(2) = 2.7e-28
Identities = 89/268 (33%), Positives = 138/268 (51%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
++ D+GG++ V L+ ++ P+ HP + G+ P G+L YGPPGCGKT LA A+A+E
Sbjct: 478 KWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVASE 537
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREME 241
F I E+++ G SE N+R++F KA AP ++F DE+D+I ++R + +
Sbjct: 538 CSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRGSSLGDGS 597
Query: 242 R---RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPG 298
R++ QL+T +D V P + IGATNRP+ +D AL RPG
Sbjct: 598 GAGDRVMNQLLTEIDG----VGPKKN-------------LFFIGATNRPELLDEALLRPG 640
Query: 299 RFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXX 358
R D+ I + +PD AR+ IL+ + R V + + +A+ T GF
Sbjct: 641 RLDQLIYIPLPDLGARISILTAILRKCPVAENVPIDFLAQKTAGFSGADLAELCQRAARA 700
Query: 359 XMKRIID----QRKS--ELSGNSIAEQH 380
++ ID +KS ELS EQ+
Sbjct: 701 AIRDAIDAEEMNKKSKLELSNKKENEQN 728
Score = 343 (125.8 bits), Expect = 2.8e-111, Sum P(3) = 2.8e-111
Identities = 65/131 (49%), Positives = 95/131 (72%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG + L +++ + +PL HP L + LGV+P G+LLYGPPG GKT +A A+ANET
Sbjct: 206 YDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANET 265
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
G F+ I+ EV+S ++G +E N+R F +A + +P+I+FIDEID+IA KRE E+ER
Sbjct: 266 GAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVER 325
Query: 243 RIVTQLMTCMD 253
R+V+QL+T MD
Sbjct: 326 RVVSQLLTLMD 336
Score = 45 (20.9 bits), Expect = 2.8e-111, Sum P(3) = 2.8e-111
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 658 KSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRY 692
K+ D + I HF++ L+ SVS+ + +Y
Sbjct: 748 KNDDDNIKYEITRHHFKEGLAGARRSVSQADLIKY 782
Score = 37 (18.1 bits), Expect = 3.9e-79, Sum P(3) = 3.9e-79
Identities = 7/32 (21%), Positives = 17/32 (53%)
Query: 184 VPF-YKISATEVVSGVSGASEENIRDLFSKAY 214
+P+ KI + + G +++ + ++F K Y
Sbjct: 111 IPYGKKIQVLPIDDTIEGLAKDTLFEIFLKPY 142
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 745 (267.3 bits), Expect = 2.8e-111, Sum P(3) = 2.8e-111
Identities = 154/354 (43%), Positives = 221/354 (62%)
Query: 276 GYVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVK 335
G V+VI ATNR +++DPALRR GRFDREI +GVPD+N R +IL + T+N+++ L +
Sbjct: 342 GQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRFEILRIHTKNMKLSPDVKLEE 401
Query: 336 IARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEME 395
+A +T GFV ++ +D E + I ++ E +E
Sbjct: 402 LASNTHGFVGADLAQLCTEAALTCIREKMDVIDLE---DEIIDK------------EVLE 446
Query: 396 RLTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEY 455
+ +T F A PSS RE +PNVKW+D+GGLD ++ I+ I P+++
Sbjct: 447 SMCVTQDHFNMALGTCNPSSLRETVVEVPNVKWDDIGGLDEVKSTLREMILYPIDHPDKF 506
Query: 456 EEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLF 515
E+FG+ G L YGPPGCGKTL+AKAVA+E ANF+ IKGPELL + GESE VR +F
Sbjct: 507 EKFGMSPSRGVLFYGPPGCGKTLLAKAVASECSANFVSIKGPELLTMWFGESEANVREVF 566
Query: 516 SRARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGAT 572
+AR +PC+LFFDE+D++ T+RG +G +R++NQLL E+DG +K +F IGAT
Sbjct: 567 DKARAAAPCVLFFDELDSIGTQRGSSLGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGAT 626
Query: 573 NRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 626
NRP+++D A+LRPGR +L+Y+PLP R IL A+ RK P+ ++V + +AQ
Sbjct: 627 NRPELLDEALLRPGRLDQLIYIPLPDLGARISILTAILRKCPVAENVPIDFLAQ 680
Score = 354 (129.7 bits), Expect = 5.4e-29, Sum P(3) = 5.4e-29
Identities = 79/212 (37%), Positives = 117/212 (55%)
Query: 416 RREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCG 475
+R+ + + ++D+GG + I ++ P ++ GV G LLYGPPG G
Sbjct: 194 KRDDEEKLDEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSG 253
Query: 476 KTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALT 535
KT IA+AVANE GA F I GPE+++K GE+E +R F A SP I+F DE+D++
Sbjct: 254 KTCIARAVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIA 313
Query: 536 TKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVP 595
KR K G V R+++QLL +DG R V VI ATNR + +D A+ R GRF + + +
Sbjct: 314 PKREKTNGEVERRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIG 373
Query: 596 LPTPDERGLILEALARKKPIDDSVDLHTIAQS 627
+P + R IL + + V L +A +
Sbjct: 374 VPDDNGRFEILRIHTKNMKLSPDVKLEELASN 405
Score = 346 (126.9 bits), Expect = 2.7e-28, Sum P(2) = 2.7e-28
Identities = 89/268 (33%), Positives = 138/268 (51%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
++ D+GG++ V L+ ++ P+ HP + G+ P G+L YGPPGCGKT LA A+A+E
Sbjct: 478 KWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVASE 537
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREME 241
F I E+++ G SE N+R++F KA AP ++F DE+D+I ++R + +
Sbjct: 538 CSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRGSSLGDGS 597
Query: 242 R---RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPG 298
R++ QL+T +D V P + IGATNRP+ +D AL RPG
Sbjct: 598 GAGDRVMNQLLTEIDG----VGPKKN-------------LFFIGATNRPELLDEALLRPG 640
Query: 299 RFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXX 358
R D+ I + +PD AR+ IL+ + R V + + +A+ T GF
Sbjct: 641 RLDQLIYIPLPDLGARISILTAILRKCPVAENVPIDFLAQKTAGFSGADLAELCQRAARA 700
Query: 359 XMKRIID----QRKS--ELSGNSIAEQH 380
++ ID +KS ELS EQ+
Sbjct: 701 AIRDAIDAEEMNKKSKLELSNKKENEQN 728
Score = 343 (125.8 bits), Expect = 2.8e-111, Sum P(3) = 2.8e-111
Identities = 65/131 (49%), Positives = 95/131 (72%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG + L +++ + +PL HP L + LGV+P G+LLYGPPG GKT +A A+ANET
Sbjct: 206 YDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANET 265
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
G F+ I+ EV+S ++G +E N+R F +A + +P+I+FIDEID+IA KRE E+ER
Sbjct: 266 GAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVER 325
Query: 243 RIVTQLMTCMD 253
R+V+QL+T MD
Sbjct: 326 RVVSQLLTLMD 336
Score = 45 (20.9 bits), Expect = 2.8e-111, Sum P(3) = 2.8e-111
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 658 KSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRY 692
K+ D + I HF++ L+ SVS+ + +Y
Sbjct: 748 KNDDDNIKYEITRHHFKEGLAGARRSVSQADLIKY 782
Score = 37 (18.1 bits), Expect = 3.9e-79, Sum P(3) = 3.9e-79
Identities = 7/32 (21%), Positives = 17/32 (53%)
Query: 184 VPF-YKISATEVVSGVSGASEENIRDLFSKAY 214
+P+ KI + + G +++ + ++F K Y
Sbjct: 111 IPYGKKIQVLPIDDTIEGLAKDTLFEIFLKPY 142
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 758 (271.9 bits), Expect = 1.5e-110, Sum P(2) = 1.5e-110
Identities = 169/441 (38%), Positives = 249/441 (56%)
Query: 277 YVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKI 336
+V+V+ ATNRP++VD ALRR GRFDREI +G+PD R++IL + T+N+++ DL +I
Sbjct: 342 HVVVMAATNRPNSVDAALRRFGRFDREIDIGIPDSTGRLEILQIHTKNMKLSEDVDLEQI 401
Query: 337 ARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMER 396
+ T G V +++ +L +SI D + +
Sbjct: 402 SAETHGHVGADLAALCSEAALQAIRK--KMTLIDLEDDSI------D-------ADLLNS 446
Query: 397 LTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
L +TM DF+ A PS+ RE +P+V WED+GGLD ++ E + +++P+++
Sbjct: 447 LAVTMDDFKWALSQSNPSALRETVVEVPHVNWEDIGGLDEVKRELQELVQYPVEYPDKFL 506
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
+FG+ G L YGPPGCGKTL+AKA+ANE ANF+ IKGPELL + GESE VR +F
Sbjct: 507 KFGMTPSRGVLFYGPPGCGKTLLAKAIANECQANFVSIKGPELLTMWFGESEANVRDVFD 566
Query: 517 RARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
+AR +PCILFFDE+D++ RG + G +R++NQ+L E+DG +K VF+IGATN
Sbjct: 567 KARQAAPCILFFDELDSIAKARGGGAGDAGGAADRVINQILTEMDGMTNKKNVFIIGATN 626
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENL 633
RPD++D A+LRPGR +L+Y+PLP R IL A RK P+ VDL + SK E
Sbjct: 627 RPDIIDPAILRPGRLDQLIYIPLPDMPSRTAILRANLRKSPVAKDVDLMYL--SKITEGF 684
Query: 634 SGXXXXXXXXXXXXXXXXXKLISS----------KSSS---DVTPFT-IKLTHFEQALSK 679
SG + + K ++ D P I+ HFE+A+
Sbjct: 685 SGADLTEICQRACKLAIREAIEAEIRAERQRQARKETAMDDDYDPVPEIRKDHFEEAMRF 744
Query: 680 ISPSVSELQIQRYKTLSETFK 700
SVS+ I++Y+ ++T +
Sbjct: 745 ARRSVSDNDIRKYEMFAQTLQ 765
Score = 381 (139.2 bits), Expect = 2.6e-32, P = 2.6e-32
Identities = 81/214 (37%), Positives = 124/214 (57%)
Query: 412 QPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGP 471
+P R + ++ ++ ++D+GG + + ++ P ++ GV G LLYGP
Sbjct: 189 EPIKREDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGP 248
Query: 472 PGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEV 531
PG GKTL+A+AVANE GA F I GPE+++K GESE +R F A +P I+F DE+
Sbjct: 249 PGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEL 308
Query: 532 DALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKL 591
DA+ KR K G V R+++QLL +DG +R V V+ ATNRP+ +D A+ R GRF +
Sbjct: 309 DAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALRRFGRFDRE 368
Query: 592 LYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
+ + +P R IL+ + + + VDL I+
Sbjct: 369 IDIGIPDSTGRLEILQIHTKNMKLSEDVDLEQIS 402
Score = 359 (131.4 bits), Expect = 8.2e-30, P = 8.2e-30
Identities = 87/224 (38%), Positives = 122/224 (54%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++D+GG++ V EL+ V P+ +P G+ P G+L YGPPGCGKT LA AIANE
Sbjct: 478 WEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANEC 537
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREM-- 240
F I E+++ G SE N+RD+F KA + AP I+F DE+D+IA R +
Sbjct: 538 QANFVSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKARGGGAGDAGG 597
Query: 241 -ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
R++ Q++T MD G V +IGATNRPD +DPA+ RPGR
Sbjct: 598 AADRVINQILTEMD--------GMTNKKN---------VFIIGATNRPDIIDPAILRPGR 640
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
D+ I + +PD +R IL R V DL+ +++ T GF
Sbjct: 641 LDQLIYIPLPDMPSRTAILRANLRKSPVAKDVDLMYLSKITEGF 684
Score = 354 (129.7 bits), Expect = 1.5e-110, Sum P(2) = 1.5e-110
Identities = 69/131 (52%), Positives = 94/131 (71%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG L ++K V +PL HP L + +GV+P GILLYGPPG GKT +A A+ANET
Sbjct: 205 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLVARAVANET 264
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
G F+ I+ E++S ++G SE N+R F +A + AP+I+FIDE+DAIA KRE E+ER
Sbjct: 265 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER 324
Query: 243 RIVTQLMTCMD 253
RIV+QL+T MD
Sbjct: 325 RIVSQLLTLMD 335
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 752 (269.8 bits), Expect = 4.9e-110, Sum P(2) = 4.9e-110
Identities = 152/362 (41%), Positives = 220/362 (60%)
Query: 277 YVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKI 336
+V+V+ ATNRP+++DPALRR GRFDRE+ +G+PD R++IL + T+N+++ DL ++
Sbjct: 340 HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQV 399
Query: 337 ARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMER 396
A T G V +++ +D +L +I D E M
Sbjct: 400 ANETHGHVGADLAALCSEAALQAIRKKMDL--IDLEDETI------D-------AEVMNS 444
Query: 397 LTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
L +TM DF A PS+ RE +P V WED+GGL+ ++ E + ++ P+++
Sbjct: 445 LAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFL 504
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
+FG+ G L YGPPGCGKTL+AKA+ANE ANFI IKGPELL + GESE VR +F
Sbjct: 505 KFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFD 564
Query: 517 RARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
+AR +PC+LFFDE+D++ RG +GG +R++NQ+L E+DG +K VF+IGATN
Sbjct: 565 KARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATN 624
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENL 633
RPD++D A+LRPGR +L+Y+PLP R IL+A RK P+ + D+ +K
Sbjct: 625 RPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKAGDVDLEFLAKMTNGF 684
Query: 634 SG 635
SG
Sbjct: 685 SG 686
Score = 385 (140.6 bits), Expect = 9.4e-33, P = 9.4e-33
Identities = 84/214 (39%), Positives = 123/214 (57%)
Query: 412 QPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGP 471
+P R + ++ V ++D+GG + + ++ P ++ GV G LLYGP
Sbjct: 187 EPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGP 246
Query: 472 PGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEV 531
PG GKTLIA+AVANE GA F I GPE+++K GESE +R F A +P I+F DE+
Sbjct: 247 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEL 306
Query: 532 DALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKL 591
DA+ KR K G V R+++QLL +DG +R V V+ ATNRP+ +D A+ R GRF +
Sbjct: 307 DAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 366
Query: 592 LYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
+ + +P R IL+ + + D VDL +A
Sbjct: 367 VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVA 400
Score = 379 (138.5 bits), Expect = 4.5e-32, P = 4.5e-32
Identities = 108/314 (34%), Positives = 153/314 (48%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++D+GG+E V EL+ V P+ HP G+ P G+L YGPPGCGKT LA AIANE
Sbjct: 476 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 535
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE-NLQRE-- 239
F I E+++ G SE N+R++F KA + AP ++F DE+D+IA R N+
Sbjct: 536 QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGG 595
Query: 240 MERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
R++ Q++T MD G V +IGATNRPD +DPA+ RPGR
Sbjct: 596 AADRVINQILTEMD--------GMSTKKN---------VFIIGATNRPDIIDPAILRPGR 638
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVE--GSFDLVKIARSTPGFVXXXXXXXXXXXXX 357
D+ I + +PDE +RV IL R V G DL +A+ T GF
Sbjct: 639 LDQLIYIPLPDEKSRVAILKANLRKSPVAKAGDVDLEFLAKMTNGFSGADLTEICQRACK 698
Query: 358 XXMKRIID---QRKSELSGN-SIAEQHSDD---WWRQPWLPEEME--RLTITMTDFEEAT 408
++ I+ +R+ E N S E DD R+ E M R +++ D +
Sbjct: 699 LAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYE 758
Query: 409 KMVQPSSRREGFSA 422
Q + GF +
Sbjct: 759 MFAQTLQQSRGFGS 772
Score = 355 (130.0 bits), Expect = 4.9e-110, Sum P(2) = 4.9e-110
Identities = 69/131 (52%), Positives = 94/131 (71%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG L ++K V +PL HP L + +GV+P GILLYGPPG GKT +A A+ANET
Sbjct: 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
G F+ I+ E++S ++G SE N+R F +A + AP+I+FIDE+DAIA KRE E+ER
Sbjct: 263 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER 322
Query: 243 RIVTQLMTCMD 253
RIV+QL+T MD
Sbjct: 323 RIVSQLLTLMD 333
Score = 238 (88.8 bits), Expect = 1.2e-49, Sum P(2) = 1.2e-49
Identities = 58/174 (33%), Positives = 91/174 (52%)
Query: 541 EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
+GG +R++NQ+L E+DG +K VF+IGATNRPD++D A+LRPGR +L+Y+PLP
Sbjct: 592 DGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEK 651
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLIS---- 656
R IL+A RK P+ + D+ +K SG + S
Sbjct: 652 SRVAILKANLRKSPVAKAGDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRR 711
Query: 657 ------SKSSSDVT---PFT-IKLTHFEQALSKISPSVSELQIQRYKTLSETFK 700
+ S+ +V P I+ HFE+A+ SVS+ I++Y+ ++T +
Sbjct: 712 ERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ 765
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 699 (251.1 bits), Expect = 2.2e-109, Sum P(3) = 2.2e-109
Identities = 153/361 (42%), Positives = 218/361 (60%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
V+VI ATNRP+++DPALRR GRFDRE+ +GVPD R++IL + T+N+++ DL IA
Sbjct: 352 VVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGRLEILRIHTKNMKLADDVDLEAIA 411
Query: 338 RSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMERL 397
T GFV M++I + K +L + E+ D E + L
Sbjct: 412 SETHGFVGADIASLCSEAA---MQQI--REKMDLI--DLEEETIDT--------EVLNSL 456
Query: 398 TITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEE 457
+T +F A PS+ RE NV W+D+GGLD +++E + + P++Y++
Sbjct: 457 GVTQDNFRFALGNSNPSALRETVVENVNVTWDDIGGLDNIKNELKETVEYPVLHPDQYQK 516
Query: 458 FGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSR 517
FG+ G L +GPPG GKTL+AKAVA E ANFI +KGPELL+ + GESE +R +F +
Sbjct: 517 FGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDK 576
Query: 518 ARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATNR 574
AR +P ++F DE+D++ RG + G +R++NQLL E+DG + +K VFVIGATNR
Sbjct: 577 ARAAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNR 636
Query: 575 PDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLS 634
PD +D A+LRPGR +L+YVPLP R IL+A R P++ +DL+ IA K S
Sbjct: 637 PDQIDPALLRPGRLDQLIYVPLPDEPARLSILQAQLRNTPLEPGLDLNEIA--KITHGFS 694
Query: 635 G 635
G
Sbjct: 695 G 695
Score = 411 (149.7 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 110/297 (37%), Positives = 150/297 (50%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG++++ ELK V P+ HP Q G+ P G+L +GPPG GKT LA A+A E
Sbjct: 487 WDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEV 546
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREM-- 240
F + E++S G SE NIRD+F KA AP++VF+DE+D+IA R +
Sbjct: 547 SANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSHGDAGG 606
Query: 241 -ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
R+V QL+T MD G V VIGATNRPD +DPAL RPGR
Sbjct: 607 ASDRVVNQLLTEMD--------GMNAKKN---------VFVIGATNRPDQIDPALLRPGR 649
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXX 359
D+ I + +PDE AR+ IL RN +E DL +IA+ T GF
Sbjct: 650 LDQLIYVPLPDEPARLSILQAQLRNTPLEPGLDLNEIAKITHGFSGADLSYIVQRSAKFA 709
Query: 360 MKRIID-QRK-SELSGNSIAEQHSDDWWRQPWLPEEMERLTITMTDFEEATKMVQPS 414
+K I+ Q K +++ + D + + EE IT FEEA K + S
Sbjct: 710 IKDSIEAQVKINKIKEEKEKVKTEDVDMKVDEVEEEDPVPYITRAHFEEAMKTAKRS 766
Score = 392 (143.0 bits), Expect = 2.8e-36, Sum P(2) = 2.8e-36
Identities = 82/214 (38%), Positives = 125/214 (58%)
Query: 412 QPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGP 471
+P +R + +++ V ++D+GG + + ++ P+ ++ G+ G L+YGP
Sbjct: 198 EPINREDEENSLNEVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGP 257
Query: 472 PGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEV 531
PG GKT++A+AVANE GA F I GPE+++K GESE +R F A SP I+F DE+
Sbjct: 258 PGTGKTIMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEI 317
Query: 532 DALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKL 591
D++ KR K G V R+++QLL +DG R V VI ATNRP+ +D A+ R GRF +
Sbjct: 318 DSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDRE 377
Query: 592 LYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
+ + +P + R IL + + D VDL IA
Sbjct: 378 VDIGVPDAEGRLEILRIHTKNMKLADDVDLEAIA 411
Score = 347 (127.2 bits), Expect = 2.2e-109, Sum P(3) = 2.2e-109
Identities = 64/131 (48%), Positives = 96/131 (73%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG + + +++ V +PL HPQL + +G++P GIL+YGPPG GKT +A A+ANET
Sbjct: 214 YDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANET 273
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
G F+ I+ E++S ++G SE N+R F +A + +PSI+FIDEID+IA KR+ E+ER
Sbjct: 274 GAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDKTNGEVER 333
Query: 243 RIVTQLMTCMD 253
R+V+QL+T MD
Sbjct: 334 RVVSQLLTLMD 344
Score = 69 (29.3 bits), Expect = 2.2e-109, Sum P(3) = 2.2e-109
Identities = 13/48 (27%), Positives = 27/48 (56%)
Query: 655 ISSKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETFKAA 702
+ D P+ I HFE+A+ SVS+ +++RY++ ++ +A+
Sbjct: 739 VDEVEEEDPVPY-ITRAHFEEAMKTAKRSVSDAELRRYESYAQQLQAS 785
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 699 (251.1 bits), Expect = 2.2e-109, Sum P(3) = 2.2e-109
Identities = 153/361 (42%), Positives = 218/361 (60%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
V+VI ATNRP+++DPALRR GRFDRE+ +GVPD R++IL + T+N+++ DL IA
Sbjct: 352 VVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGRLEILRIHTKNMKLADDVDLEAIA 411
Query: 338 RSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMERL 397
T GFV M++I + K +L + E+ D E + L
Sbjct: 412 SETHGFVGADIASLCSEAA---MQQI--REKMDLI--DLEEETIDT--------EVLNSL 456
Query: 398 TITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEE 457
+T +F A PS+ RE NV W+D+GGLD +++E + + P++Y++
Sbjct: 457 GVTQDNFRFALGNSNPSALRETVVENVNVTWDDIGGLDNIKNELKETVEYPVLHPDQYQK 516
Query: 458 FGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSR 517
FG+ G L +GPPG GKTL+AKAVA E ANFI +KGPELL+ + GESE +R +F +
Sbjct: 517 FGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDK 576
Query: 518 ARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATNR 574
AR +P ++F DE+D++ RG + G +R++NQLL E+DG + +K VFVIGATNR
Sbjct: 577 ARAAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNR 636
Query: 575 PDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLS 634
PD +D A+LRPGR +L+YVPLP R IL+A R P++ +DL+ IA K S
Sbjct: 637 PDQIDPALLRPGRLDQLIYVPLPDEPARLSILQAQLRNTPLEPGLDLNEIA--KITHGFS 694
Query: 635 G 635
G
Sbjct: 695 G 695
Score = 411 (149.7 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 110/297 (37%), Positives = 150/297 (50%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG++++ ELK V P+ HP Q G+ P G+L +GPPG GKT LA A+A E
Sbjct: 487 WDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEV 546
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREM-- 240
F + E++S G SE NIRD+F KA AP++VF+DE+D+IA R +
Sbjct: 547 SANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSHGDAGG 606
Query: 241 -ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
R+V QL+T MD G V VIGATNRPD +DPAL RPGR
Sbjct: 607 ASDRVVNQLLTEMD--------GMNAKKN---------VFVIGATNRPDQIDPALLRPGR 649
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXX 359
D+ I + +PDE AR+ IL RN +E DL +IA+ T GF
Sbjct: 650 LDQLIYVPLPDEPARLSILQAQLRNTPLEPGLDLNEIAKITHGFSGADLSYIVQRSAKFA 709
Query: 360 MKRIID-QRK-SELSGNSIAEQHSDDWWRQPWLPEEMERLTITMTDFEEATKMVQPS 414
+K I+ Q K +++ + D + + EE IT FEEA K + S
Sbjct: 710 IKDSIEAQVKINKIKEEKEKVKTEDVDMKVDEVEEEDPVPYITRAHFEEAMKTAKRS 766
Score = 392 (143.0 bits), Expect = 2.8e-36, Sum P(2) = 2.8e-36
Identities = 82/214 (38%), Positives = 125/214 (58%)
Query: 412 QPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGP 471
+P +R + +++ V ++D+GG + + ++ P+ ++ G+ G L+YGP
Sbjct: 198 EPINREDEENSLNEVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGP 257
Query: 472 PGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEV 531
PG GKT++A+AVANE GA F I GPE+++K GESE +R F A SP I+F DE+
Sbjct: 258 PGTGKTIMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEI 317
Query: 532 DALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKL 591
D++ KR K G V R+++QLL +DG R V VI ATNRP+ +D A+ R GRF +
Sbjct: 318 DSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDRE 377
Query: 592 LYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
+ + +P + R IL + + D VDL IA
Sbjct: 378 VDIGVPDAEGRLEILRIHTKNMKLADDVDLEAIA 411
Score = 347 (127.2 bits), Expect = 2.2e-109, Sum P(3) = 2.2e-109
Identities = 64/131 (48%), Positives = 96/131 (73%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG + + +++ V +PL HPQL + +G++P GIL+YGPPG GKT +A A+ANET
Sbjct: 214 YDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANET 273
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
G F+ I+ E++S ++G SE N+R F +A + +PSI+FIDEID+IA KR+ E+ER
Sbjct: 274 GAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDKTNGEVER 333
Query: 243 RIVTQLMTCMD 253
R+V+QL+T MD
Sbjct: 334 RVVSQLLTLMD 344
Score = 69 (29.3 bits), Expect = 2.2e-109, Sum P(3) = 2.2e-109
Identities = 13/48 (27%), Positives = 27/48 (56%)
Query: 655 ISSKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETFKAA 702
+ D P+ I HFE+A+ SVS+ +++RY++ ++ +A+
Sbjct: 739 VDEVEEEDPVPY-ITRAHFEEAMKTAKRSVSDAELRRYESYAQQLQAS 785
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 739 (265.2 bits), Expect = 3.1e-108, Sum P(2) = 3.1e-108
Identities = 162/441 (36%), Positives = 248/441 (56%)
Query: 277 YVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKI 336
+++V+ ATNRP+++DPALRR GRFDREI +G+PD R+++L + T+N+++ DL +I
Sbjct: 337 HLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVLRIHTKNMKLHDDVDLEQI 396
Query: 337 ARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMER 396
A + G V ++ +D +L + I D E +
Sbjct: 397 AAESHGHVGADLASLCSEAALQQIREKMDL--IDLEDDKI------D-------AEVLAS 441
Query: 397 LTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
L +TM +F A PS+ RE +PN W D+GGL+ ++ E + ++ P+++
Sbjct: 442 LAVTMENFRYAMTKSSPSALRETVVEVPNTTWTDIGGLESVKKELQELVQYPVEHPDKFL 501
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
+FG+ G L YGPPGCGKTL+AKA+ANE ANFI +KGPELL + GESE VR +F
Sbjct: 502 KFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFD 561
Query: 517 RARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
+AR+ +PC+LFFDE+D++ RG + G +R++NQ+L E+DG +K VF+IGATN
Sbjct: 562 KARSAAPCVLFFDELDSIAKARGGNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGATN 621
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ------- 626
RPD++D A+LRPGR +L+Y+PLP R IL+A RK P+ VDL IA+
Sbjct: 622 RPDIIDPAILRPGRLDQLIYIPLPDDKSREAILKANLRKSPLAKEVDLTYIAKVTQGFSG 681
Query: 627 ---SKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVT---PFT-IKLTHFEQALSK 679
++ C+ + + S+ D+ P I HFE+A+
Sbjct: 682 ADLTEICQRAC-KLAIRQAIEAEIRREKERAENQNSAMDMDEDDPVPEITSAHFEEAMKF 740
Query: 680 ISPSVSELQIQRYKTLSETFK 700
SVS+ I++Y+ ++T +
Sbjct: 741 ARRSVSDNDIRKYEMFAQTLQ 761
Score = 392 (143.0 bits), Expect = 1.4e-33, P = 1.4e-33
Identities = 94/275 (34%), Positives = 139/275 (50%)
Query: 413 PSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPP 472
P R E ++ V ++D+GG + + ++ P ++ GV G L+YGPP
Sbjct: 185 PIKREEEEESLNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPP 244
Query: 473 GCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVD 532
G GKTLIA+AVANE GA F I GPE+++K GESE +R F A SP I+F DE+D
Sbjct: 245 GTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEID 304
Query: 533 ALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLL 592
A+ KR K G V R+++QLL +DG K + V+ ATNRP+ +D A+ R GRF + +
Sbjct: 305 AIAPKRDKTHGEVERRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREI 364
Query: 593 YVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCE---NLSGXXXXXXXXXXXXXX 649
+ +P R +L + + D VDL IA +L+
Sbjct: 365 DIGIPDATGRLEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIREKM 424
Query: 650 XXXKLISSKSSSDV-TPFTIKLTHFEQALSKISPS 683
L K ++V + + +F A++K SPS
Sbjct: 425 DLIDLEDDKIDAEVLASLAVTMENFRYAMTKSSPS 459
Score = 375 (137.1 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 89/222 (40%), Positives = 122/222 (54%)
Query: 125 DLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGV 184
D+GG+ESV +EL+ V P+ HP G++P G+L YGPPGCGKT LA AIANE
Sbjct: 475 DIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQA 534
Query: 185 PFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREM---E 241
F + E+++ G SE N+RD+F KA AP ++F DE+D+IA R +
Sbjct: 535 NFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGDAGGAA 594
Query: 242 RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFD 301
R++ Q++T MD G V +IGATNRPD +DPA+ RPGR D
Sbjct: 595 DRVINQILTEMD--------GMGAKKN---------VFIIGATNRPDIIDPAILRPGRLD 637
Query: 302 REIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
+ I + +PD+ +R IL R + DL IA+ T GF
Sbjct: 638 QLIYIPLPDDKSREAILKANLRKSPLAKEVDLTYIAKVTQGF 679
Score = 351 (128.6 bits), Expect = 3.1e-108, Sum P(2) = 3.1e-108
Identities = 70/141 (49%), Positives = 98/141 (69%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG L ++K V +PL HP L + +GV+P GIL+YGPPG GKT +A A+ANET
Sbjct: 200 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANET 259
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
G F+ I+ E++S ++G SE N+R F +A + +P+I+FIDEIDAIA KR+ E+ER
Sbjct: 260 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRDKTHGEVER 319
Query: 243 RIVTQLMTCMD----ESHRLV 259
RIV+QL+T MD SH +V
Sbjct: 320 RIVSQLLTLMDGMKKSSHLIV 340
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 732 (262.7 bits), Expect = 1.0e-107, Sum P(2) = 1.0e-107
Identities = 153/354 (43%), Positives = 217/354 (61%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
++VI ATNRP+++D ALRR GRFDREI +G+PD R++IL + T+N+++ DL +IA
Sbjct: 347 LVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIA 406
Query: 338 RSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMERL 397
GFV +++I + K EL + + D E + L
Sbjct: 407 NECHGFVGADLASLCSEAA---LQQI--REKMELI--DLEDDQID--------AEVLNSL 451
Query: 398 TITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEE 457
+TM +F A PS+ RE PN W D+GGL ++ E + ++ PE+Y +
Sbjct: 452 AVTMENFRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLK 511
Query: 458 FGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSR 517
FG+ G L YGPPGCGKTL+AKA+ANE ANFI IKGPELL + GESE VR +F +
Sbjct: 512 FGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDK 571
Query: 518 ARTCSPCILFFDEVDALTTKRGK----EGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
AR +PC+LFFDE+D++ RG +GG +R++NQ+L E+DG + +K VF+IGATN
Sbjct: 572 ARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATN 631
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQS 627
RPD++D AVLRPGR +L+Y+PLP R IL+A RK P+ +DL +A++
Sbjct: 632 RPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKN 685
Score = 378 (138.1 bits), Expect = 5.9e-32, P = 5.9e-32
Identities = 84/223 (37%), Positives = 123/223 (55%)
Query: 413 PSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPP 472
P R E ++ ++ ++D+GG+ + + ++ P+ ++ G+ G LL+GPP
Sbjct: 194 PIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPP 253
Query: 473 GCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVD 532
G GKTLIA+AVANE G+ F I GPE+++K GESE +R F P ILF DE+D
Sbjct: 254 GTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEID 313
Query: 533 ALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLL 592
A+ KR K G V R+++QLL +DG R + VI ATNRP+ +D A+ R GRF + +
Sbjct: 314 AIAPKREKTNGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREI 373
Query: 593 YVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
+ +P R IL + + D VDL IA C G
Sbjct: 374 DIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANE--CHGFVG 414
Score = 378 (138.1 bits), Expect = 5.9e-32, P = 5.9e-32
Identities = 104/300 (34%), Positives = 148/300 (49%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+++V EL+ V P+ HP+ G++P G+L YGPPGCGKT LA AIANE
Sbjct: 482 WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC 541
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQRE--- 239
F I E+++ G SE N+RD+F KA AP ++F DE+D+IA R
Sbjct: 542 QANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGG 601
Query: 240 -MERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPG 298
R++ Q++T MD G V +IGATNRPD +DPA+ RPG
Sbjct: 602 GASDRVINQVLTEMD--------GMNAKKN---------VFIIGATNRPDIIDPAVLRPG 644
Query: 299 RFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXX 358
R D+ I + +PDE +R QIL R + DL +A++T GF
Sbjct: 645 RLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKL 704
Query: 359 XMKRIIDQR----KSELSGNSIAEQHSDDWWRQPWLPEEMERLTITMTDFEEATKMVQPS 414
++ I++ K + E+ +D P +PE IT FEEA K + S
Sbjct: 705 AIRESIEKEIRIEKERQDRQARGEELMEDDAVDP-VPE------ITRAHFEEAMKFARRS 757
Score = 353 (129.3 bits), Expect = 1.0e-107, Sum P(2) = 1.0e-107
Identities = 70/131 (53%), Positives = 94/131 (71%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ DLGG+ L ++K V +PL HPQL + +G++P GILL+GPPG GKT +A A+ANET
Sbjct: 209 YDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANET 268
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
G F+ I+ EV+S +SG SE N+R F + + P+I+FIDEIDAIA KRE E+ER
Sbjct: 269 GSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKTNGEVER 328
Query: 243 RIVTQLMTCMD 253
RIV+QL+T MD
Sbjct: 329 RIVSQLLTLMD 339
Score = 234 (87.4 bits), Expect = 5.4e-49, Sum P(2) = 5.4e-49
Identities = 59/178 (33%), Positives = 94/178 (52%)
Query: 539 GKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPT 598
G +GG +R++NQ+L E+DG + +K VF+IGATNRPD++D AVLRPGR +L+Y+PLP
Sbjct: 597 GGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPD 656
Query: 599 PDERGLILEALARKKPIDDSVDLHTIAQS----------KFCEN---LSGXXXXXXXXXX 645
R IL+A RK P+ +DL +A++ + C+ L+
Sbjct: 657 EASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKEIRI 716
Query: 646 XXXXXXXKLISSKSSSD--VTPFT-IKLTHFEQALSKISPSVSELQIQRYKTLSETFK 700
+ + D V P I HFE+A+ SV++ I++Y+ ++T +
Sbjct: 717 EKERQDRQARGEELMEDDAVDPVPEITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQ 774
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 732 (262.7 bits), Expect = 1.0e-107, Sum P(2) = 1.0e-107
Identities = 153/354 (43%), Positives = 217/354 (61%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
++VI ATNRP+++D ALRR GRFDREI +G+PD R++IL + T+N+++ DL +IA
Sbjct: 347 LVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIA 406
Query: 338 RSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMERL 397
GFV +++I + K EL + + D E + L
Sbjct: 407 NECHGFVGADLASLCSEAA---LQQI--REKMELI--DLEDDQID--------AEVLNSL 451
Query: 398 TITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEE 457
+TM +F A PS+ RE PN W D+GGL ++ E + ++ PE+Y +
Sbjct: 452 AVTMENFRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLK 511
Query: 458 FGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSR 517
FG+ G L YGPPGCGKTL+AKA+ANE ANFI IKGPELL + GESE VR +F +
Sbjct: 512 FGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDK 571
Query: 518 ARTCSPCILFFDEVDALTTKRGK----EGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
AR +PC+LFFDE+D++ RG +GG +R++NQ+L E+DG + +K VF+IGATN
Sbjct: 572 ARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATN 631
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQS 627
RPD++D AVLRPGR +L+Y+PLP R IL+A RK P+ +DL +A++
Sbjct: 632 RPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKN 685
Score = 378 (138.1 bits), Expect = 5.9e-32, P = 5.9e-32
Identities = 84/223 (37%), Positives = 123/223 (55%)
Query: 413 PSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPP 472
P R E ++ ++ ++D+GG+ + + ++ P+ ++ G+ G LL+GPP
Sbjct: 194 PIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPP 253
Query: 473 GCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVD 532
G GKTLIA+AVANE G+ F I GPE+++K GESE +R F P ILF DE+D
Sbjct: 254 GTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEID 313
Query: 533 ALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLL 592
A+ KR K G V R+++QLL +DG R + VI ATNRP+ +D A+ R GRF + +
Sbjct: 314 AIAPKREKTNGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREI 373
Query: 593 YVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
+ +P R IL + + D VDL IA C G
Sbjct: 374 DIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANE--CHGFVG 414
Score = 378 (138.1 bits), Expect = 5.9e-32, P = 5.9e-32
Identities = 104/300 (34%), Positives = 148/300 (49%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+++V EL+ V P+ HP+ G++P G+L YGPPGCGKT LA AIANE
Sbjct: 482 WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC 541
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQRE--- 239
F I E+++ G SE N+RD+F KA AP ++F DE+D+IA R
Sbjct: 542 QANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGG 601
Query: 240 -MERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPG 298
R++ Q++T MD G V +IGATNRPD +DPA+ RPG
Sbjct: 602 GASDRVINQVLTEMD--------GMNAKKN---------VFIIGATNRPDIIDPAVLRPG 644
Query: 299 RFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXX 358
R D+ I + +PDE +R QIL R + DL +A++T GF
Sbjct: 645 RLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKL 704
Query: 359 XMKRIIDQR----KSELSGNSIAEQHSDDWWRQPWLPEEMERLTITMTDFEEATKMVQPS 414
++ I++ K + E+ +D P +PE IT FEEA K + S
Sbjct: 705 AIRESIEKEIRIEKERQDRQARGEELMEDDAVDP-VPE------ITRAHFEEAMKFARRS 757
Score = 353 (129.3 bits), Expect = 1.0e-107, Sum P(2) = 1.0e-107
Identities = 70/131 (53%), Positives = 94/131 (71%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ DLGG+ L ++K V +PL HPQL + +G++P GILL+GPPG GKT +A A+ANET
Sbjct: 209 YDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANET 268
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
G F+ I+ EV+S +SG SE N+R F + + P+I+FIDEIDAIA KRE E+ER
Sbjct: 269 GSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKTNGEVER 328
Query: 243 RIVTQLMTCMD 253
RIV+QL+T MD
Sbjct: 329 RIVSQLLTLMD 339
Score = 234 (87.4 bits), Expect = 5.4e-49, Sum P(2) = 5.4e-49
Identities = 59/178 (33%), Positives = 94/178 (52%)
Query: 539 GKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPT 598
G +GG +R++NQ+L E+DG + +K VF+IGATNRPD++D AVLRPGR +L+Y+PLP
Sbjct: 597 GGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPD 656
Query: 599 PDERGLILEALARKKPIDDSVDLHTIAQS----------KFCEN---LSGXXXXXXXXXX 645
R IL+A RK P+ +DL +A++ + C+ L+
Sbjct: 657 EASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKEIRI 716
Query: 646 XXXXXXXKLISSKSSSD--VTPFT-IKLTHFEQALSKISPSVSELQIQRYKTLSETFK 700
+ + D V P I HFE+A+ SV++ I++Y+ ++T +
Sbjct: 717 EKERQDRQARGEELMEDDAVDPVPEITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQ 774
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 726 (260.6 bits), Expect = 2.7e-107, Sum P(2) = 2.7e-107
Identities = 152/354 (42%), Positives = 217/354 (61%)
Query: 277 YVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKI 336
+V+VI ATNRP+++D ALRR GRFDREI +G+PD R++IL + T+N+++ DL ++
Sbjct: 345 HVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQV 404
Query: 337 ARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMER 396
A GFV +++I + K EL E + D E +
Sbjct: 405 ANECHGFVGADLASLCSEAA---IQQI--REKMELID---LEDDTID-------AEVLNS 449
Query: 397 LTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
L +TM +F A PS+ RE PN W D+GGL ++ E + ++ PE+Y
Sbjct: 450 LAVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYL 509
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
+FG+ G L YGPPGCGKTL+AKA+ANE ANFI IKGPELL + GESE VR +F
Sbjct: 510 KFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFD 569
Query: 517 RARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
+AR +PC+LFFDE+D++ RG + G +R++NQ+L E+DG + +K VF+IGATN
Sbjct: 570 KARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATN 629
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQS 627
RPD++D AVLRPGR +L+Y+PLP R I +A RK P+ +DL+ +A++
Sbjct: 630 RPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKN 683
Score = 392 (143.0 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 98/277 (35%), Positives = 142/277 (51%)
Query: 413 PSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPP 472
P R E A+ V ++D+GG+ + + ++ P+ ++ GV G LL+GPP
Sbjct: 193 PIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPP 252
Query: 473 GCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVD 532
G GKTLIA+AVANE GA F I GPE+++K GESE +R F+ SP ILF DE+D
Sbjct: 253 GTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEID 312
Query: 533 ALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLL 592
A+ KR K G V +R+++QLL +DG R V VI ATNRP+ +D A+ R GRF + +
Sbjct: 313 AIAPKREKAHGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREI 372
Query: 593 YVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXX 652
+ +P R IL + + + VDL +A C G
Sbjct: 373 DIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANE--CHGFVGADLASLCSEAAIQQIRE 430
Query: 653 K--LISSKSSS-D---VTPFTIKLTHFEQALSKISPS 683
K LI + + D + + + +F A+ K SPS
Sbjct: 431 KMELIDLEDDTIDAEVLNSLAVTMENFRFAMGKSSPS 467
Score = 379 (138.5 bits), Expect = 4.6e-32, P = 4.6e-32
Identities = 88/224 (39%), Positives = 125/224 (55%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+++V EL+ V P+ HP+ G++P G+L YGPPGCGKT LA AIANE
Sbjct: 481 WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC 540
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREM-- 240
F I E+++ G SE N+RD+F KA AP ++F DE+D+IA R +
Sbjct: 541 QANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGG 600
Query: 241 -ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
R++ Q++T MD G V +IGATNRPD +DPA+ RPGR
Sbjct: 601 AADRVINQVLTEMD--------GMNAKKN---------VFIIGATNRPDIIDPAVLRPGR 643
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
D+ I + +PDE +R+QI R + DL +A++T GF
Sbjct: 644 LDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGF 687
Score = 355 (130.0 bits), Expect = 2.7e-107, Sum P(2) = 2.7e-107
Identities = 69/131 (52%), Positives = 96/131 (73%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ DLGG+ L ++K V +PL HPQL + +GV+P GILL+GPPG GKT +A A+ANET
Sbjct: 208 YDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANET 267
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
G F+ I+ E++S +SG SE N+R F++ + +P+I+FIDEIDAIA KRE E+E+
Sbjct: 268 GAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKAHGEVEK 327
Query: 243 RIVTQLMTCMD 253
RIV+QL+T MD
Sbjct: 328 RIVSQLLTLMD 338
Score = 225 (84.3 bits), Expect = 2.8e-48, Sum P(2) = 2.8e-48
Identities = 57/179 (31%), Positives = 93/179 (51%)
Query: 539 GKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPT 598
G GG +R++NQ+L E+DG + +K VF+IGATNRPD++D AVLRPGR +L+Y+PLP
Sbjct: 596 GDAGG-AADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPD 654
Query: 599 PDERGLILEALARKKPIDDSVDLHTIAQS----------KFCENLSGXXXXXXXXXXXXX 648
R I +A RK P+ +DL+ +A++ + C+
Sbjct: 655 EASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREIRQ 714
Query: 649 XXXXKLISSKSS-------SDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETFK 700
+ S++ +D P I HFE+A+ SV++ I++Y+ ++T +
Sbjct: 715 EKERQDRSARGEELMEDELADPVP-EITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQ 772
Score = 174 (66.3 bits), Expect = 6.4e-43, Sum P(2) = 6.4e-43
Identities = 48/141 (34%), Positives = 69/141 (48%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
V +IGATNRPD +DPA+ RPGR D+ I + +PDE +R+QI R + DL +A
Sbjct: 622 VFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLA 681
Query: 338 RSTPGF----VXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEE 393
++T GF + ++R I Q K ++ E+ +D P +PE
Sbjct: 682 KNTVGFSGADLTEICQRACKLAIRESIEREIRQEKERQDRSARGEELMEDELADP-VPE- 739
Query: 394 MERLTITMTDFEEATKMVQPS 414
IT FEEA K + S
Sbjct: 740 -----ITRAHFEEAMKFARRS 755
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 726 (260.6 bits), Expect = 2.7e-107, Sum P(2) = 2.7e-107
Identities = 152/354 (42%), Positives = 217/354 (61%)
Query: 277 YVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKI 336
+V+VI ATNRP+++D ALRR GRFDREI +G+PD R++IL + T+N+++ DL ++
Sbjct: 345 HVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQV 404
Query: 337 ARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMER 396
A GFV +++I + K EL E + D E +
Sbjct: 405 ANECHGFVGADLASLCSEAA---IQQI--REKMELID---LEDDTID-------AEVLNS 449
Query: 397 LTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
L +TM +F A PS+ RE PN W D+GGL ++ E + ++ PE+Y
Sbjct: 450 LAVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYL 509
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
+FG+ G L YGPPGCGKTL+AKA+ANE ANFI IKGPELL + GESE VR +F
Sbjct: 510 KFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFD 569
Query: 517 RARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
+AR +PC+LFFDE+D++ RG + G +R++NQ+L E+DG + +K VF+IGATN
Sbjct: 570 KARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATN 629
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQS 627
RPD++D AVLRPGR +L+Y+PLP R I +A RK P+ +DL+ +A++
Sbjct: 630 RPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKN 683
Score = 392 (143.0 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 98/277 (35%), Positives = 142/277 (51%)
Query: 413 PSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPP 472
P R E A+ V ++D+GG+ + + ++ P+ ++ GV G LL+GPP
Sbjct: 193 PIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPP 252
Query: 473 GCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVD 532
G GKTLIA+AVANE GA F I GPE+++K GESE +R F+ SP ILF DE+D
Sbjct: 253 GTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEID 312
Query: 533 ALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLL 592
A+ KR K G V +R+++QLL +DG R V VI ATNRP+ +D A+ R GRF + +
Sbjct: 313 AIAPKREKAHGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREI 372
Query: 593 YVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXX 652
+ +P R IL + + + VDL +A C G
Sbjct: 373 DIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANE--CHGFVGADLASLCSEAAIQQIRE 430
Query: 653 K--LISSKSSS-D---VTPFTIKLTHFEQALSKISPS 683
K LI + + D + + + +F A+ K SPS
Sbjct: 431 KMELIDLEDDTIDAEVLNSLAVTMENFRFAMGKSSPS 467
Score = 379 (138.5 bits), Expect = 4.6e-32, P = 4.6e-32
Identities = 88/224 (39%), Positives = 125/224 (55%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+++V EL+ V P+ HP+ G++P G+L YGPPGCGKT LA AIANE
Sbjct: 481 WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC 540
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREM-- 240
F I E+++ G SE N+RD+F KA AP ++F DE+D+IA R +
Sbjct: 541 QANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGG 600
Query: 241 -ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
R++ Q++T MD G V +IGATNRPD +DPA+ RPGR
Sbjct: 601 AADRVINQVLTEMD--------GMNAKKN---------VFIIGATNRPDIIDPAVLRPGR 643
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
D+ I + +PDE +R+QI R + DL +A++T GF
Sbjct: 644 LDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGF 687
Score = 355 (130.0 bits), Expect = 2.7e-107, Sum P(2) = 2.7e-107
Identities = 69/131 (52%), Positives = 96/131 (73%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ DLGG+ L ++K V +PL HPQL + +GV+P GILL+GPPG GKT +A A+ANET
Sbjct: 208 YDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANET 267
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
G F+ I+ E++S +SG SE N+R F++ + +P+I+FIDEIDAIA KRE E+E+
Sbjct: 268 GAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKAHGEVEK 327
Query: 243 RIVTQLMTCMD 253
RIV+QL+T MD
Sbjct: 328 RIVSQLLTLMD 338
Score = 225 (84.3 bits), Expect = 2.8e-48, Sum P(2) = 2.8e-48
Identities = 57/179 (31%), Positives = 93/179 (51%)
Query: 539 GKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPT 598
G GG +R++NQ+L E+DG + +K VF+IGATNRPD++D AVLRPGR +L+Y+PLP
Sbjct: 596 GDAGG-AADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPD 654
Query: 599 PDERGLILEALARKKPIDDSVDLHTIAQS----------KFCENLSGXXXXXXXXXXXXX 648
R I +A RK P+ +DL+ +A++ + C+
Sbjct: 655 EASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREIRQ 714
Query: 649 XXXXKLISSKSS-------SDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETFK 700
+ S++ +D P I HFE+A+ SV++ I++Y+ ++T +
Sbjct: 715 EKERQDRSARGEELMEDELADPVP-EITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQ 772
Score = 174 (66.3 bits), Expect = 6.4e-43, Sum P(2) = 6.4e-43
Identities = 48/141 (34%), Positives = 69/141 (48%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
V +IGATNRPD +DPA+ RPGR D+ I + +PDE +R+QI R + DL +A
Sbjct: 622 VFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLA 681
Query: 338 RSTPGF----VXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEE 393
++T GF + ++R I Q K ++ E+ +D P +PE
Sbjct: 682 KNTVGFSGADLTEICQRACKLAIRESIEREIRQEKERQDRSARGEELMEDELADP-VPE- 739
Query: 394 MERLTITMTDFEEATKMVQPS 414
IT FEEA K + S
Sbjct: 740 -----ITRAHFEEAMKFARRS 755
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 720 (258.5 bits), Expect = 5.1e-106, Sum P(2) = 5.1e-106
Identities = 153/352 (43%), Positives = 218/352 (61%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
V+V+ ATNRP+++DPALRR GRFDRE+ +G+PD R++IL + T+N+++ DL +IA
Sbjct: 359 VVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILQIHTKNMKLGDDVDLEQIA 418
Query: 338 RSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMERL 397
T G+V M++I + K +L + E D E ++ L
Sbjct: 419 AETHGYVGSDVAALCSEAA---MQQI--REKMDLI--DLDEDTID--------AEVLDSL 463
Query: 398 TITMTDFEEATKMVQPSSRRE-GFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
+TM +F A + PS+ RE +PNV+WED+GGLD ++ + + + PE++
Sbjct: 464 GVTMENFRFALGVSNPSALREVAVVEVPNVRWEDIGGLDEVKQDLREQVQYPVDHPEKFL 523
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
+FG+ G L YGPPG GKT++AKAVANE ANFI +KGPELL+ + GESE +R +F
Sbjct: 524 KFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFD 583
Query: 517 RARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
+AR +PCI+F DE+D++ RG + G +R++NQLL E+DG +K VFVIGATN
Sbjct: 584 KARAAAPCIVFLDELDSIAKARGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATN 643
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
RP+ +D A+ RPGR L+YVPLP R IL+A RK P+ D VDL IA
Sbjct: 644 RPEQLDPALCRPGRLDSLIYVPLPDELGRLSILKAQLRKTPVSDDVDLQYIA 695
Score = 396 (144.5 bits), Expect = 5.3e-34, P = 5.3e-34
Identities = 85/214 (39%), Positives = 124/214 (57%)
Query: 412 QPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGP 471
+P R E + + V ++D+GG + + ++ P+ ++ G+ G LLYGP
Sbjct: 205 EPIQRDEEENNLNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGP 264
Query: 472 PGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEV 531
PG GKTL+A+AVANE GA F I GPE+++K GESE +R F A SP I+F DE+
Sbjct: 265 PGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEI 324
Query: 532 DALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKL 591
D++ KR K G V R+++QLL +DG R V V+ ATNRP+ +D A+ R GRF +
Sbjct: 325 DSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDRE 384
Query: 592 LYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
+ + +P P R IL+ + + D VDL IA
Sbjct: 385 VDIGIPDPTGRLEILQIHTKNMKLGDDVDLEQIA 418
Score = 388 (141.6 bits), Expect = 4.4e-33, P = 4.4e-33
Identities = 94/225 (41%), Positives = 123/225 (54%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
R++D+GG++ V ++L+ +V P+ HP+ G+ P G+L YGPPG GKT LA A+ANE
Sbjct: 494 RWEDIGGLDEVKQDLREQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANE 553
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREM- 240
F + E++S G SE NIRD+F KA AP IVF+DE+D+IA R +
Sbjct: 554 CAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCIVFLDELDSIAKARGGSVGDAG 613
Query: 241 --ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPG 298
R+V QL+T MD G V VIGATNRP+ +DPAL RPG
Sbjct: 614 GASDRVVNQLLTEMD--------GMTSKKN---------VFVIGATNRPEQLDPALCRPG 656
Query: 299 RFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
R D I + +PDE R+ IL R V DL IA T GF
Sbjct: 657 RLDSLIYVPLPDELGRLSILKAQLRKTPVSDDVDLQYIANKTHGF 701
Score = 349 (127.9 bits), Expect = 5.1e-106, Sum P(2) = 5.1e-106
Identities = 64/131 (48%), Positives = 95/131 (72%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG + +++ V +PL HPQL + +G++P G+LLYGPPG GKT +A A+ANET
Sbjct: 221 YDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVANET 280
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
G F+ I+ E++S ++G SE N+R F +A + +P+I+FIDEID+IA KRE E+ER
Sbjct: 281 GAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVER 340
Query: 243 RIVTQLMTCMD 253
R+V+QL+T MD
Sbjct: 341 RVVSQLLTLMD 351
Score = 240 (89.5 bits), Expect = 3.9e-49, Sum P(2) = 3.9e-49
Identities = 65/178 (36%), Positives = 90/178 (50%)
Query: 539 GKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPT 598
G GG +R++NQLL E+DG +K VFVIGATNRP+ +D A+ RPGR L+YVPLP
Sbjct: 610 GDAGG-ASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDSLIYVPLPD 668
Query: 599 PDERGLILEALARKKPIDDSVDLHTIAQSK--FCENLSGXXXXXXXXXXXXXXXXXKLIS 656
R IL+A RK P+ D VDL IA F G +
Sbjct: 669 ELGRLSILKAQLRKTPVSDDVDLQYIANKTHGFSGADLGFITQRAVKIAIKESITADINR 728
Query: 657 SKS----------SSDVTPFTIKLT--HFEQALSKISPSVSELQIQRYKTLSETFKAA 702
+K+ D +LT HFE+A+ + SVS+++I+RY+ ++ K A
Sbjct: 729 TKALEAAGEDVPMDEDAEDPVPELTKRHFEEAMQQARKSVSDVEIRRYEAFAQQMKNA 786
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 720 (258.5 bits), Expect = 1.1e-105, Sum P(2) = 1.1e-105
Identities = 148/352 (42%), Positives = 219/352 (62%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
V+V+ ATNRP+++DPALRR GRFDRE+ +G+PD R++IL + T+N+++ DL +IA
Sbjct: 361 VVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILRIHTKNMKLADDVDLEQIA 420
Query: 338 RSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMERL 397
T G+V M++I + K ++ + E D E ++ L
Sbjct: 421 AETHGYVGSDLASLCSEAA---MQQI--REKMDMI--DLDEDEID--------AEVLDSL 465
Query: 398 TITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEE 457
+TM +F A PS+ RE +PNV+WED+GGL+ ++ E + + + E++
Sbjct: 466 GVTMDNFRFALGSSNPSALRETVVEVPNVRWEDIGGLEEVKRELRETVQMPVMYAEKFLR 525
Query: 458 FGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSR 517
FGV G L +GPPG GKTL+AKA+ANE ANFI +KGPELL+ + GESE VR +F +
Sbjct: 526 FGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDK 585
Query: 518 ARTCSPCILFFDEVDALTTKRGKEGG--WVVERLLNQLLIELDGADKRKGVFVIGATNRP 575
AR +PC++F DE+D++ RG G +R++NQLL E+DG + +K VFVIGATNRP
Sbjct: 586 ARAAAPCVVFLDELDSIAKARGASAGDSGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRP 645
Query: 576 DVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQS 627
D +D A++RPGR +L+YVPLP + R IL+ R P+ + VDL +A++
Sbjct: 646 DQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVAKA 697
Score = 400 (145.9 bits), Expect = 1.8e-34, P = 1.8e-34
Identities = 85/214 (39%), Positives = 125/214 (58%)
Query: 412 QPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGP 471
+P +R + S++ V ++D+GG + + ++ P+ ++ G+ G L+YGP
Sbjct: 207 EPINREDEESSLAEVGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGP 266
Query: 472 PGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEV 531
PG GKTL+A+AVANE GA F I GPE+++K GESE +R F A SP I+F DE+
Sbjct: 267 PGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEI 326
Query: 532 DALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKL 591
D++ KR K G V R+++QLL +DG R V V+ ATNRP+ +D A+ R GRF +
Sbjct: 327 DSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDRE 386
Query: 592 LYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
+ V +P P R IL + + D VDL IA
Sbjct: 387 VDVGIPDPTGRLEILRIHTKNMKLADDVDLEQIA 420
Score = 390 (142.3 bits), Expect = 2.6e-33, P = 2.6e-33
Identities = 94/224 (41%), Positives = 125/224 (55%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
R++D+GG+E V EL+ V +P+ + + GV P G+L +GPPG GKT LA AIANE
Sbjct: 495 RWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANE 554
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREME 241
F + E++S G SE N+RD+F KA AP +VF+DE+D+IA R +
Sbjct: 555 CSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKARGASAGDSG 614
Query: 242 R--RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
R+V QL+T MD G V VIGATNRPD +DPAL RPGR
Sbjct: 615 GGDRVVNQLLTEMD--------GVNSKKN---------VFVIGATNRPDQIDPALMRPGR 657
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
D+ I + +PDE AR IL R+ V DL +A++T GF
Sbjct: 658 LDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVAKATHGF 701
Score = 346 (126.9 bits), Expect = 1.1e-105, Sum P(2) = 1.1e-105
Identities = 64/131 (48%), Positives = 95/131 (72%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG + +++ V +PL HPQL + +G++P GIL+YGPPG GKT +A A+ANET
Sbjct: 223 YDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANET 282
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
G F+ I+ E++S ++G SE N+R F +A + +P+I+FIDEID+IA KRE E+ER
Sbjct: 283 GAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVER 342
Query: 243 RIVTQLMTCMD 253
R+V+QL+T MD
Sbjct: 343 RVVSQLLTLMD 353
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 719 (258.2 bits), Expect = 1.1e-105, Sum P(2) = 1.1e-105
Identities = 151/352 (42%), Positives = 219/352 (62%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
V+V+ ATNRP+++DPALRR GRFDRE+ +G+PD R++ILS+ T+N+++ DL IA
Sbjct: 362 VVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILSIHTKNMKLGEDVDLETIA 421
Query: 338 RSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMERL 397
T G+V M++I + K +L + E D E ++ L
Sbjct: 422 AETHGYVGSDLASLCSEAA---MQQI--REKMDLI--DLDEDTID--------AEVLDSL 466
Query: 398 TITMTDFEEATKMVQPSSRRE-GFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
+TM +F A + PS+ RE +PNV+WED+GGL+ ++ E + + PE+++
Sbjct: 467 GVTMENFRYALGVSNPSALREVAVVEVPNVRWEDIGGLEEVKRELIESVQYPVDHPEKFQ 526
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
+FG+ G L YGPPG GKT++AKAVANE ANFI +KGPELL+ + GESE +R +F
Sbjct: 527 KFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFD 586
Query: 517 RARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
+AR +PC++F DE+D++ RG + G +R++NQLL E+DG +K VFVIGATN
Sbjct: 587 KARAAAPCVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATN 646
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
RP+ +D A++RPGR L+YVPLP R IL+A RK P+ VD+ IA
Sbjct: 647 RPEQLDAALVRPGRLDTLVYVPLPDQASREGILKAQLRKTPVASDVDIEFIA 698
Score = 394 (143.8 bits), Expect = 9.0e-34, P = 9.0e-34
Identities = 83/214 (38%), Positives = 124/214 (57%)
Query: 412 QPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGP 471
+P R + + + V ++D+GG + + ++ P+ ++ G+ G L+YGP
Sbjct: 208 EPIQREDEENNLNEVGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGP 267
Query: 472 PGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEV 531
PG GKTL+A+AVANE GA F I GPE+++K GESE +R F A SP I+F DE+
Sbjct: 268 PGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEI 327
Query: 532 DALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKL 591
D++ KR K G V R+++QLL +DG R V V+ ATNRP+ +D A+ R GRF +
Sbjct: 328 DSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDRE 387
Query: 592 LYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
+ + +P P R IL + + + VDL TIA
Sbjct: 388 VDIGIPDPTGRLEILSIHTKNMKLGEDVDLETIA 421
Score = 374 (136.7 bits), Expect = 1.8e-31, P = 1.8e-31
Identities = 97/270 (35%), Positives = 133/270 (49%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
R++D+GG+E V EL V P+ HP+ Q G+ P G+L YGPPG GKT LA A+ANE
Sbjct: 497 RWEDIGGLEEVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVANE 556
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREM- 240
F + E++S G SE NIRD+F KA AP +VF+DE+D+IA R +
Sbjct: 557 CAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKSRGGSVGDAG 616
Query: 241 --ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPG 298
R+V QL+T MD G V VIGATNRP+ +D AL RPG
Sbjct: 617 GASDRVVNQLLTEMD--------GMTSKKN---------VFVIGATNRPEQLDAALVRPG 659
Query: 299 RFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXX 358
R D + + +PD+ +R IL R V D+ IA T GF
Sbjct: 660 RLDTLVYVPLPDQASREGILKAQLRKTPVASDVDIEFIASKTHGFSGADLGFVTQRAVKL 719
Query: 359 XMKRIID-----QRKSELSGNSIAEQHSDD 383
+K I Q++ E +G + + ++
Sbjct: 720 AIKESISAEIERQKQREAAGEDVKMEDEEE 749
Score = 347 (127.2 bits), Expect = 1.1e-105, Sum P(2) = 1.1e-105
Identities = 64/131 (48%), Positives = 95/131 (72%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG + +++ V +PL HPQL + +G++P GIL+YGPPG GKT +A A+ANET
Sbjct: 224 YDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANET 283
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
G F+ I+ E++S ++G SE N+R F +A + +P+I+FIDEID+IA KRE E+ER
Sbjct: 284 GAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVER 343
Query: 243 RIVTQLMTCMD 253
R+V+QL+T MD
Sbjct: 344 RVVSQLLTLMD 354
Score = 231 (86.4 bits), Expect = 6.1e-48, Sum P(2) = 6.1e-48
Identities = 61/179 (34%), Positives = 87/179 (48%)
Query: 539 GKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPT 598
G GG +R++NQLL E+DG +K VFVIGATNRP+ +D A++RPGR L+YVPLP
Sbjct: 613 GDAGG-ASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDAALVRPGRLDTLVYVPLPD 671
Query: 599 PDERGLILEALARKKPIDDSVDLHTIAQS-----------------KFCENLSGXXXXXX 641
R IL+A RK P+ VD+ IA K S
Sbjct: 672 QASREGILKAQLRKTPVASDVDIEFIASKTHGFSGADLGFVTQRAVKLAIKESISAEIER 731
Query: 642 XXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETFK 700
K+ + D P + HFE+A+ SVS+++I+RY+ +++ K
Sbjct: 732 QKQREAAGEDVKMEDEEEGEDPVP-ELTRAHFEEAMKTARRSVSDVEIRRYEAFAQSLK 789
>UNIPROTKB|E7ERY0 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI00946072 ProteinModelPortal:E7ERY0 SMR:E7ERY0
Ensembl:ENST00000482491 ArrayExpress:E7ERY0 Bgee:E7ERY0
Uniprot:E7ERY0
Length = 580
Score = 1046 (373.3 bits), Expect = 1.1e-105, P = 1.1e-105
Identities = 232/550 (42%), Positives = 322/550 (58%)
Query: 179 ANETGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQR 238
+ E +P K++A E+VSGVSG SE+ +R+LF +A AP I+FIDEIDAI KRE +
Sbjct: 43 SRELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVASK 102
Query: 239 EMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPG 298
+MERRIV QL+TCMD+ + + VLVIGATNRPD++DPALRR G
Sbjct: 103 DMERRIVAQLLTCMDDLNNVAATAR--------------VLVIGATNRPDSLDPALRRAG 148
Query: 299 RFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXX 358
RFDREI LG+PDE +R +IL L R LR+ +FD +A TPGFV
Sbjct: 149 RFDREICLGIPDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMC 208
Query: 359 XMKRII----DQRKS-----ELSGNSIAEQH---------SDDWWR--------QPWLPE 392
+ R++ +Q+K +L + E+ D+ R P E
Sbjct: 209 AVNRVLMKLQEQQKKNPEMEDLPSKGVQEERLGTEPTSETQDELQRLLGLLRDQDPLSEE 268
Query: 393 EMERLTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFP 452
+M+ L I + DF A VQPS++REGF +PNV W D+G L+ +R E I+ ++ P
Sbjct: 269 QMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILAPVRNP 328
Query: 453 EEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVR 512
++++ G+ G LL GPPGCGKTL+AKAVANE+G NFI +KGPELLN YVGESE AVR
Sbjct: 329 DQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVR 388
Query: 513 TLFSRARTCSPCILFFDEVDALTTKRG-KEGGWVVERLLNQLLIELDGADKRKGVFVIGA 571
+F RA+ +PC++FFDEVDAL +R +E G V R++NQLL E+DG + R+ VF++ A
Sbjct: 389 QVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASV-RVVNQLLTEMDGLEARQQVFIMAA 447
Query: 572 TNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALAR---KKPIDDSVDLHTIAQSK 628
TNRPD++D A+LRPGR K L+V LP P +R IL+ + + K P+D V+L IA
Sbjct: 448 TNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDL 507
Query: 629 FCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPSVSELQ 688
C+ +G ++ KS ++ + HFE+A K+ S+S+
Sbjct: 508 RCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKVSHKHFEEAFKKVRSSISKKD 567
Query: 689 IQRYKTLSET 698
Y+ L E+
Sbjct: 568 QIMYERLQES 577
Score = 282 (104.3 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 53/129 (41%), Positives = 83/129 (64%)
Query: 125 DLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGV 184
D+G +E + EEL M ++ P+ +P + LG+ AG+LL GPPGCGKT LA A+ANE+G+
Sbjct: 306 DIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGL 365
Query: 185 PFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRI 244
F + E+++ G SE +R +F +A +AP ++F DE+DA+ +R + + R+
Sbjct: 366 NFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASVRV 425
Query: 245 VTQLMTCMD 253
V QL+T MD
Sbjct: 426 VNQLLTEMD 434
Score = 220 (82.5 bits), Expect = 9.6e-15, P = 9.6e-15
Identities = 52/147 (35%), Positives = 81/147 (55%)
Query: 482 AVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE 541
+ + E + + PE+++ GESE +R LF +A + +PCI+F DE+DA+T KR
Sbjct: 41 SASRELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVA 100
Query: 542 GGWVVERLLNQLLI---ELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPT 598
+ R++ QLL +L+ V VIGATNRPD +D A+ R GRF + + + +P
Sbjct: 101 SKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPD 160
Query: 599 PDERGLILEALARKKPIDDSVDLHTIA 625
R IL+ L RK + + D +A
Sbjct: 161 EASRERILQTLCRKLRLPQAFDFCHLA 187
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 704 (252.9 bits), Expect = 3.2e-104, Sum P(2) = 3.2e-104
Identities = 152/361 (42%), Positives = 218/361 (60%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
V+VI ATNRP+++DPALRR GRFDRE+ +G+PD R+++L + T+N+++ DL +A
Sbjct: 351 VVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVLRIHTKNMKLADDVDLEALA 410
Query: 338 RSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMERL 397
T G+V M++I + K +L + E D E ++ L
Sbjct: 411 AETHGYVGADIASLCSEAA---MQQI--REKMDLI--DLDEDEID--------AEVLDSL 455
Query: 398 TITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEE 457
+TM +F A PS+ RE NV W+DVGGLD ++ E + + P++Y +
Sbjct: 456 GVTMDNFRFALGNSNPSALRETVVESVNVTWDDVGGLDEIKEELKETVEYPVLHPDQYTK 515
Query: 458 FGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSR 517
FG+ G L YGPPG GKTL+AKAVA E ANFI +KGPELL+ + GESE +R +F +
Sbjct: 516 FGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDK 575
Query: 518 ARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATNR 574
AR +P ++F DE+D++ RG + G +R++NQLL E+DG + +K VFVIGATNR
Sbjct: 576 ARAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNR 635
Query: 575 PDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLS 634
PD +D A+LRPGR +L+YVPLP + R IL A RK P++ ++L IA K + S
Sbjct: 636 PDQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGLELTAIA--KATQGFS 693
Query: 635 G 635
G
Sbjct: 694 G 694
Score = 408 (148.7 bits), Expect = 2.2e-35, P = 2.2e-35
Identities = 109/300 (36%), Positives = 150/300 (50%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG++ + EELK V P+ HP G+ P G+L YGPPG GKT LA A+A E
Sbjct: 486 WDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEV 545
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREM-- 240
F + E++S G SE NIRD+F KA AP++VF+DE+D+IA R +
Sbjct: 546 SANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSLGDAGG 605
Query: 241 -ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
R+V QL+T MD G V VIGATNRPD +DPA+ RPGR
Sbjct: 606 ASDRVVNQLLTEMD--------GMNAKKN---------VFVIGATNRPDQIDPAILRPGR 648
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXX 359
D+ I + +PDENAR+ IL+ R +E +L IA++T GF
Sbjct: 649 LDQLIYVPLPDENARLSILNAQLRKTPLEPGLELTAIAKATQGFSGADLLYIVQRAAKYA 708
Query: 360 MKRIID---QRKSELSGNSIAE--QHSDDWWRQPWLPEEMERLTITMTDFEEATKMVQPS 414
+K I+ Q ++E E + +D+ + PE IT F EA K + S
Sbjct: 709 IKDSIEAHRQHEAEKEVKVEGEDVEMTDEGAKAEQEPEVDPVPYITKEHFAEAMKTAKRS 768
Score = 379 (138.5 bits), Expect = 4.9e-32, P = 4.9e-32
Identities = 80/214 (37%), Positives = 123/214 (57%)
Query: 412 QPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGP 471
+P +R + + + V ++D+GG + + ++ P+ ++ G+ G L+YGP
Sbjct: 197 EPINREDEENNMNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGP 256
Query: 472 PGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEV 531
PG GKTL+A+AVANE GA F I GPE+++K GESE +R F A +P I+F DE+
Sbjct: 257 PGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEI 316
Query: 532 DALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKL 591
D++ KR K G V R+++QLL +DG R V VI ATNRP+ +D A+ R GRF +
Sbjct: 317 DSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDRE 376
Query: 592 LYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
+ + +P R +L + + D VDL +A
Sbjct: 377 VDIGIPDATGRLEVLRIHTKNMKLADDVDLEALA 410
Score = 348 (127.6 bits), Expect = 3.2e-104, Sum P(2) = 3.2e-104
Identities = 64/131 (48%), Positives = 95/131 (72%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG + +++ V +PL HPQL + +G++P G+L+YGPPG GKT +A A+ANET
Sbjct: 213 YDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVANET 272
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
G F+ I+ EV+S ++G SE N+R F +A + AP+I+FIDEID+IA KR+ E+ER
Sbjct: 273 GAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDKTNGEVER 332
Query: 243 RIVTQLMTCMD 253
R+V+QL+T MD
Sbjct: 333 RVVSQLLTLMD 343
Score = 223 (83.6 bits), Expect = 3.5e-47, Sum P(2) = 3.5e-47
Identities = 61/189 (32%), Positives = 96/189 (50%)
Query: 539 GKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPT 598
G GG +R++NQLL E+DG + +K VFVIGATNRPD +D A+LRPGR +L+YVPLP
Sbjct: 601 GDAGG-ASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPD 659
Query: 599 PDERGLILEALARKKPIDDSVDLHTIAQS-----------------KFC--ENLSGXXXX 639
+ R IL A RK P++ ++L IA++ K+ +++
Sbjct: 660 ENARLSILNAQLRKTPLEPGLELTAIAKATQGFSGADLLYIVQRAAKYAIKDSIEAHRQH 719
Query: 640 XXXXXXXXXXXXXKLISSKSSS------DVTPFTIKLTHFEQALSKISPSVSELQIQRYK 693
++ + + D P+ K HF +A+ SVS+ +++RY+
Sbjct: 720 EAEKEVKVEGEDVEMTDEGAKAEQEPEVDPVPYITK-EHFAEAMKTAKRSVSDAELRRYE 778
Query: 694 TLSETFKAA 702
S+ KA+
Sbjct: 779 AYSQQMKAS 787
Score = 45 (20.9 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 472 PGCGKTLIAKAVANEAGANFIHI 494
PG T IAKA +GA+ ++I
Sbjct: 678 PGLELTAIAKATQGFSGADLLYI 700
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 578 (208.5 bits), Expect = 3.7e-101, Sum P(4) = 3.7e-101
Identities = 109/243 (44%), Positives = 158/243 (65%)
Query: 394 MERLTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPE 453
+ +LTI F+ A + PSS RE IP V W D+GG++ ++ + I+ +++
Sbjct: 899 LNKLTIKAKHFQHALNICNPSSLRERQVQIPTVTWNDIGGMNEVKEQLKETILYPLEYKH 958
Query: 454 EYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRT 513
Y +F + G LLYGPPGCGKTL+AKA+ANE ANFI +KGPELL + GESE VR
Sbjct: 959 LYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTMWFGESEANVRD 1018
Query: 514 LFSRARTCSPCILFFDEVDALTTKRGKE-GGWVVERLLNQLLIELDGADKRKGVFVIGAT 572
LF +AR SPCI+FFDE+D+L +R +R++NQ+L E+DG +++K +F+I AT
Sbjct: 1019 LFDKARAASPCIIFFDEIDSLAKERNSNTNNDASDRVINQILTEIDGINEKKTIFIIAAT 1078
Query: 573 NRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCEN 632
NRPD++D+A+ RPGR KL+Y+ LP R I +A+ + P+++ VD+H +A K E
Sbjct: 1079 NRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKAILKNTPLNEDVDIHDMA--KRTEG 1136
Query: 633 LSG 635
SG
Sbjct: 1137 FSG 1139
Score = 394 (143.8 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 81/211 (38%), Positives = 126/211 (59%)
Query: 425 NVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVA 484
++ +ED+GG+ ++ I +K+PE + G+ G L++G PG GKT IAKA+A
Sbjct: 523 DITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIA 582
Query: 485 NEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGW 544
NE+ A I GPE+++K++GESE +R +F +A +PCI+F DE+D++ KR K
Sbjct: 583 NESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNE 642
Query: 545 VVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGL 604
+ +R+++QLL +DG K V V+ ATNRP+ +D A+ R GRF + + +P+P R
Sbjct: 643 LEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYE 702
Query: 605 ILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
IL +K +D V+L IA K C G
Sbjct: 703 ILLTKTKKMKLDPDVNLRKIA--KECHGYVG 731
Score = 368 (134.6 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 84/222 (37%), Positives = 119/222 (53%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GGM V E+LK ++ PL + L GILLYGPPGCGKT LA AIANE
Sbjct: 933 WNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANEC 992
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE-NLQREME 241
F + E+++ G SE N+RDLF KA +P I+F DEID++A +R N +
Sbjct: 993 KANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERNSNTNNDAS 1052
Query: 242 RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFD 301
R++ Q++T +D G + +I ATNRPD +D AL RPGR D
Sbjct: 1053 DRVINQILTEID--------GINEKKT---------IFIIAATNRPDILDKALTRPGRLD 1095
Query: 302 REIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
+ I + +PD +R I + +N + D+ +A+ T GF
Sbjct: 1096 KLIYISLPDLKSRYSIFKAILKNTPLNEDVDIHDMAKRTEGF 1137
Score = 294 (108.6 bits), Expect = 3.7e-101, Sum P(4) = 3.7e-101
Identities = 56/131 (42%), Positives = 88/131 (67%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++DLGGM+ L +++ + +PL +P++ +G+ G+L++G PG GKT +A AIANE+
Sbjct: 526 YEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIANES 585
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
Y I+ E++S G SE+ +R +F KA P I+FIDEID+IA+KR E+E+
Sbjct: 586 NAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNELEK 645
Query: 243 RIVTQLMTCMD 253
R+V+QL+T MD
Sbjct: 646 RVVSQLLTLMD 656
Score = 178 (67.7 bits), Expect = 3.7e-101, Sum P(4) = 3.7e-101
Identities = 35/67 (52%), Positives = 49/67 (73%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
VLV+ ATNRP+++DPALRR GRFDREI + VPDE R +IL T+ ++++ +L KIA
Sbjct: 664 VLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEILLTKTKKMKLDPDVNLRKIA 723
Query: 338 RSTPGFV 344
+ G+V
Sbjct: 724 KECHGYV 730
Score = 52 (23.4 bits), Expect = 2.0e-36, Sum P(3) = 2.0e-36
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 667 TIKLTHFEQALSKISPS-VSELQIQ 690
TIK HF+ AL+ +PS + E Q+Q
Sbjct: 903 TIKAKHFQHALNICNPSSLRERQVQ 927
Score = 39 (18.8 bits), Expect = 3.7e-101, Sum P(4) = 3.7e-101
Identities = 10/43 (23%), Positives = 17/43 (39%)
Query: 655 ISSKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSE 697
I + D P T+ HF+ A S+ + +Y+ E
Sbjct: 1181 IDDTDTYDPVP-TLSKKHFDLAFKNARISIQPEDVLKYEKFKE 1222
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 578 (208.5 bits), Expect = 3.7e-101, Sum P(4) = 3.7e-101
Identities = 109/243 (44%), Positives = 158/243 (65%)
Query: 394 MERLTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPE 453
+ +LTI F+ A + PSS RE IP V W D+GG++ ++ + I+ +++
Sbjct: 899 LNKLTIKAKHFQHALNICNPSSLRERQVQIPTVTWNDIGGMNEVKEQLKETILYPLEYKH 958
Query: 454 EYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRT 513
Y +F + G LLYGPPGCGKTL+AKA+ANE ANFI +KGPELL + GESE VR
Sbjct: 959 LYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTMWFGESEANVRD 1018
Query: 514 LFSRARTCSPCILFFDEVDALTTKRGKE-GGWVVERLLNQLLIELDGADKRKGVFVIGAT 572
LF +AR SPCI+FFDE+D+L +R +R++NQ+L E+DG +++K +F+I AT
Sbjct: 1019 LFDKARAASPCIIFFDEIDSLAKERNSNTNNDASDRVINQILTEIDGINEKKTIFIIAAT 1078
Query: 573 NRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCEN 632
NRPD++D+A+ RPGR KL+Y+ LP R I +A+ + P+++ VD+H +A K E
Sbjct: 1079 NRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKAILKNTPLNEDVDIHDMA--KRTEG 1136
Query: 633 LSG 635
SG
Sbjct: 1137 FSG 1139
Score = 394 (143.8 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 81/211 (38%), Positives = 126/211 (59%)
Query: 425 NVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVA 484
++ +ED+GG+ ++ I +K+PE + G+ G L++G PG GKT IAKA+A
Sbjct: 523 DITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIA 582
Query: 485 NEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGW 544
NE+ A I GPE+++K++GESE +R +F +A +PCI+F DE+D++ KR K
Sbjct: 583 NESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNE 642
Query: 545 VVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGL 604
+ +R+++QLL +DG K V V+ ATNRP+ +D A+ R GRF + + +P+P R
Sbjct: 643 LEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYE 702
Query: 605 ILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
IL +K +D V+L IA K C G
Sbjct: 703 ILLTKTKKMKLDPDVNLRKIA--KECHGYVG 731
Score = 368 (134.6 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 84/222 (37%), Positives = 119/222 (53%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GGM V E+LK ++ PL + L GILLYGPPGCGKT LA AIANE
Sbjct: 933 WNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANEC 992
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE-NLQREME 241
F + E+++ G SE N+RDLF KA +P I+F DEID++A +R N +
Sbjct: 993 KANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERNSNTNNDAS 1052
Query: 242 RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFD 301
R++ Q++T +D G + +I ATNRPD +D AL RPGR D
Sbjct: 1053 DRVINQILTEID--------GINEKKT---------IFIIAATNRPDILDKALTRPGRLD 1095
Query: 302 REIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
+ I + +PD +R I + +N + D+ +A+ T GF
Sbjct: 1096 KLIYISLPDLKSRYSIFKAILKNTPLNEDVDIHDMAKRTEGF 1137
Score = 294 (108.6 bits), Expect = 3.7e-101, Sum P(4) = 3.7e-101
Identities = 56/131 (42%), Positives = 88/131 (67%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++DLGGM+ L +++ + +PL +P++ +G+ G+L++G PG GKT +A AIANE+
Sbjct: 526 YEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIANES 585
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
Y I+ E++S G SE+ +R +F KA P I+FIDEID+IA+KR E+E+
Sbjct: 586 NAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNELEK 645
Query: 243 RIVTQLMTCMD 253
R+V+QL+T MD
Sbjct: 646 RVVSQLLTLMD 656
Score = 178 (67.7 bits), Expect = 3.7e-101, Sum P(4) = 3.7e-101
Identities = 35/67 (52%), Positives = 49/67 (73%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
VLV+ ATNRP+++DPALRR GRFDREI + VPDE R +IL T+ ++++ +L KIA
Sbjct: 664 VLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEILLTKTKKMKLDPDVNLRKIA 723
Query: 338 RSTPGFV 344
+ G+V
Sbjct: 724 KECHGYV 730
Score = 52 (23.4 bits), Expect = 2.0e-36, Sum P(3) = 2.0e-36
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 667 TIKLTHFEQALSKISPS-VSELQIQ 690
TIK HF+ AL+ +PS + E Q+Q
Sbjct: 903 TIKAKHFQHALNICNPSSLRERQVQ 927
Score = 39 (18.8 bits), Expect = 3.7e-101, Sum P(4) = 3.7e-101
Identities = 10/43 (23%), Positives = 17/43 (39%)
Query: 655 ISSKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSE 697
I + D P T+ HF+ A S+ + +Y+ E
Sbjct: 1181 IDDTDTYDPVP-TLSKKHFDLAFKNARISIQPEDVLKYEKFKE 1222
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 770 (276.1 bits), Expect = 2.5e-100, Sum P(2) = 2.5e-100
Identities = 167/440 (37%), Positives = 248/440 (56%)
Query: 277 YVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKI 336
+V+V+ ATNRP+++DPALRR GRFDRE+ +G+PD R++IL + T+N+++ DL ++
Sbjct: 338 HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQV 397
Query: 337 ARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMER 396
A T G V +++ +D +L +I D E M
Sbjct: 398 ANETHGHVGADLAALCSEAALQAIRKKMDL--IDLEDETI------D-------AEVMNS 442
Query: 397 LTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
L +TM DF A PS+ RE +P V WED+GGL+ ++ E + ++ P+++
Sbjct: 443 LAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFL 502
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
+FG+ G L YGPPGCGKTL+AKA+ANE ANFI IKGPELL + GESE VR +F
Sbjct: 503 KFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFD 562
Query: 517 RARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
+AR +PC+LFFDE+D++ RG +GG +R++NQ+L E+DG +K VF+IGATN
Sbjct: 563 KARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATN 622
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ------- 626
RPD++D A+LRPGR +L+Y+PLP R IL+A RK P+ VDL +A+
Sbjct: 623 RPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSG 682
Query: 627 ---SKFCENLSGXXXXXXXXXXXXXXXXXKLISSK---SSSDVTPFTIKLTHFEQALSKI 680
++ C+ + S D P I+ HFE+A+
Sbjct: 683 ADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVP-EIRRDHFEEAMRFA 741
Query: 681 SPSVSELQIQRYKTLSETFK 700
SVS+ I++Y+ ++T +
Sbjct: 742 RRSVSDNDIRKYEMFAQTLQ 761
Score = 381 (139.2 bits), Expect = 2.6e-32, P = 2.6e-32
Identities = 107/312 (34%), Positives = 152/312 (48%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++D+GG+E V EL+ V P+ HP G+ P G+L YGPPGCGKT LA AIANE
Sbjct: 474 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 533
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE-NLQRE-- 239
F I E+++ G SE N+R++F KA + AP ++F DE+D+IA R N+
Sbjct: 534 QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGG 593
Query: 240 MERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
R++ Q++T MD G V +IGATNRPD +DPA+ RPGR
Sbjct: 594 AADRVINQILTEMD--------GMSTKKN---------VFIIGATNRPDIIDPAILRPGR 636
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXX 359
D+ I + +PDE +RV IL R V DL +A+ T GF
Sbjct: 637 LDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLA 696
Query: 360 MKRIID---QRKSELSGN-SIAEQHSDD---WWRQPWLPEEME--RLTITMTDFEEATKM 410
++ I+ +R+ E N S E DD R+ E M R +++ D +
Sbjct: 697 IRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMF 756
Query: 411 VQPSSRREGFSA 422
Q + GF +
Sbjct: 757 AQTLQQSRGFGS 768
Score = 310 (114.2 bits), Expect = 2.3e-24, P = 2.3e-24
Identities = 76/214 (35%), Positives = 112/214 (52%)
Query: 412 QPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGP 471
+P R + ++ V ++D+GG + + ++ P ++ GV G LLYGP
Sbjct: 187 EPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGP 246
Query: 472 PGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEV 531
PG GKTLIA+AVANE GA F I GPE+++K GE E A R S A F
Sbjct: 247 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGEGESACRKKISPAPPPLKTAGIFKSD 306
Query: 532 DALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKL 591
D + + G V R+++QLL +DG +R V V+ ATNRP+ +D A+ R GRF +
Sbjct: 307 DCFPSPQTH--GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 364
Query: 592 LYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
+ + +P R IL+ + + D VDL +A
Sbjct: 365 VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVA 398
Score = 245 (91.3 bits), Expect = 2.5e-100, Sum P(2) = 2.5e-100
Identities = 55/131 (41%), Positives = 77/131 (58%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG L ++K V +PL HP L + +GV+P GILLYGPPG GKT +A A+ANET
Sbjct: 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
G F+ I+ E++S ++G E R S A + D S + + E+ER
Sbjct: 263 GAFFFLINGPEIMSKLAGEGESACRKKISPAPPPLKTAGIFKSDDCFPSPQTH--GEVER 320
Query: 243 RIVTQLMTCMD 253
RIV+QL+T MD
Sbjct: 321 RIVSQLLTLMD 331
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 578 (208.5 bits), Expect = 3.9e-98, Sum P(2) = 3.9e-98
Identities = 129/312 (41%), Positives = 189/312 (60%)
Query: 386 RQPWLPE-EMERLT-ITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDR 443
+QP L + +M L IT+ DF + ++PS+ RE +PNV W D+GGL+ ++ + +
Sbjct: 582 KQPNLSDSKMAGLVKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQ 641
Query: 444 YIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKY 503
+ +K PE + G+ G LLYGPPGC KT+IAKA+ANE+G NF+ IKGPEL+NKY
Sbjct: 642 AVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKY 701
Query: 504 VGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGW--VVERLLNQLLIELDGAD 561
VGESE AVR +F +AR SP I+FFDE+DAL +RG G V +R+L QLL E+DG +
Sbjct: 702 VGESERAVREIFRKARAVSPSIIFFDELDALAIERGSSSGAGNVADRVLAQLLTEMDGIE 761
Query: 562 KRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDL 621
+ K V ++ ATNRPD +D+A++RPGR +++YVPLP R IL PI + V+L
Sbjct: 762 QLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNDVNL 821
Query: 622 -HTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKI 680
I Q+ + SG L++ + D+ +I HF +ALS +
Sbjct: 822 DELIFQT---DTYSGAEIIAVCREAA-------LLALEE--DIQANSITRRHFTRALSTV 869
Query: 681 SPSVSELQIQRY 692
+P +S+ ++R+
Sbjct: 870 TPRISK-SLRRF 880
Score = 426 (155.0 bits), Expect = 3.9e-98, Sum P(2) = 3.9e-98
Identities = 96/253 (37%), Positives = 149/253 (58%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVP 185
+GG+ S L+ ++ + +PL P+L + G+ P G+LLYGPPG GKT +A A+ANE G
Sbjct: 355 IGGLSSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVANEVGAY 414
Query: 186 FYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIV 245
I+ E++S G +E +R +F++A PSI+FIDE+DA+ KRE Q E+E+R+V
Sbjct: 415 VSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEVEKRVV 474
Query: 246 TQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDREIV 305
L+T MD + G G VLV+GATNRP A+D ALRRPGRFD+EI
Sbjct: 475 ASLLTLMDG---IGSEGSE-----------GQVLVLGATNRPHALDAALRRPGRFDKEIE 520
Query: 306 LGVPDENARVQILSVLTRNL-RVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXXMKRII 364
+GVP+ R+ IL L + + + +L+++A S G+V ++R++
Sbjct: 521 IGVPNAADRLDILQKLLQRVPHLLTEVELLQLANSAHGYVGADLKALCNEAGLYALRRVL 580
Query: 365 DQRKSELSGNSIA 377
+++ + LS + +A
Sbjct: 581 NKQPN-LSDSKMA 592
Score = 358 (131.1 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 83/206 (40%), Positives = 123/206 (59%)
Query: 426 VKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVAN 485
V ++ +GGL I +K PE ++ +G+ G LLYGPPG GKT+IA+AVAN
Sbjct: 350 VTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVAN 409
Query: 486 EAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWV 545
E GA I GPE+++K+ GE+E +R +F+ A P I+F DE+DAL KR V
Sbjct: 410 EVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEV 469
Query: 546 VERLLNQLLIELDG--ADKRKG-VFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDER 602
+R++ LL +DG ++ +G V V+GATNRP +D A+ RPGRF K + + +P +R
Sbjct: 470 EKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAADR 529
Query: 603 GLILEALARKKP-IDDSVDLHTIAQS 627
IL+ L ++ P + V+L +A S
Sbjct: 530 LDILQKLLQRVPHLLTEVELLQLANS 555
Score = 357 (130.7 bits), Expect = 1.8e-29, P = 1.8e-29
Identities = 81/220 (36%), Positives = 127/220 (57%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+E++ +LK V PL HP+ +G++P G+LLYGPPGC KT +A A+ANE+
Sbjct: 626 WSDIGGLENIKLKLKQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANES 685
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQR--EM 240
G+ F I E+++ G SE +R++F KA +PSI+F DE+DA+A +R + +
Sbjct: 686 GLNFLAIKGPELMNKYVGESERAVREIFRKARAVSPSIIFFDELDALAIERGSSSGAGNV 745
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRF 300
R++ QL+T MD +L V ++ ATNRPD +D AL RPGR
Sbjct: 746 ADRVLAQLLTEMDGIEQLKD-----------------VTILAATNRPDRIDKALMRPGRI 788
Query: 301 DREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARST 340
DR I + +PD R +IL++ ++ + +L ++ T
Sbjct: 789 DRIIYVPLPDAATRREILNLQFHSMPISNDVNLDELIFQT 828
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 582 (209.9 bits), Expect = 1.5e-97, Sum P(2) = 1.5e-97
Identities = 129/312 (41%), Positives = 189/312 (60%)
Query: 386 RQPWLPE-EMERLT-ITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDR 443
+QP LP+ ++ L IT+ DF +A ++PS+ RE +PNV W D+GGL+ ++ + ++
Sbjct: 582 KQPNLPDVKVAGLVKITLKDFLQAMNDIRPSAMREIAIDVPNVSWSDIGGLESIKLKLEQ 641
Query: 444 YIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKY 503
+ +K PE + G+ G LLYGPPGC KT+IAKA+ANE+G NF+ IKGPEL+NKY
Sbjct: 642 AVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKY 701
Query: 504 VGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE--GGWVVERLLNQLLIELDGAD 561
VGESE AVR F +AR +P I+FFDE+DAL +RG G V +R+L QLL E+DG +
Sbjct: 702 VGESERAVRETFRKARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIE 761
Query: 562 KRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDL 621
+ K V ++ ATNRPD +D+A++RPGR +++YVPLP R I + P+ + VDL
Sbjct: 762 QLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNEVDL 821
Query: 622 -HTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKI 680
I Q+ + SG L++ + D+ I HF QALS +
Sbjct: 822 DELILQT---DAYSGAEIVAVCREAA-------LLALEE--DIQANLIMKRHFTQALSTV 869
Query: 681 SPSVSELQIQRY 692
+P + E ++R+
Sbjct: 870 TPRIPE-SLRRF 880
Score = 416 (151.5 bits), Expect = 1.5e-97, Sum P(2) = 1.5e-97
Identities = 93/243 (38%), Positives = 139/243 (57%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVP 185
+GG+ S L+ ++ + +PL P+L + G+ G+LLYGPPG GKT +A A+ANE G
Sbjct: 355 IGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVANEVGAY 414
Query: 186 FYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIV 245
I+ E++S G +E +R +F++A PSI+FIDE+DA+ KRE Q E+E+R+V
Sbjct: 415 VSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEVEKRVV 474
Query: 246 TQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDREIV 305
L+T MD G VLV+GATNRP A+D ALRRPGRFD+EI
Sbjct: 475 ASLLTLMD--------------GIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIE 520
Query: 306 LGVPDENARVQILSVLTRNL-RVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXXMKRII 364
+GVP+ R+ IL L R + + +L+++A S G+V ++RI+
Sbjct: 521 IGVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCALRRIL 580
Query: 365 DQR 367
++
Sbjct: 581 KKQ 583
Score = 362 (132.5 bits), Expect = 4.8e-30, P = 4.8e-30
Identities = 80/192 (41%), Positives = 116/192 (60%)
Query: 426 VKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVAN 485
V ++ +GGL I +K PE ++ +G+ G LLYGPPG GKT+IA+AVAN
Sbjct: 350 VTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVAN 409
Query: 486 EAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWV 545
E GA I GPE+++K+ GE+E +R +F+ A P I+F DE+DAL KR V
Sbjct: 410 EVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEV 469
Query: 546 VERLLNQLLIELDG--ADKRKG-VFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDER 602
+R++ LL +DG ++ +G V V+GATNRP +D A+ RPGRF K + + +P +R
Sbjct: 470 EKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDR 529
Query: 603 GLILEALARKKP 614
IL+ L R+ P
Sbjct: 530 LDILQKLLRRVP 541
Score = 360 (131.8 bits), Expect = 8.1e-30, P = 8.1e-30
Identities = 84/223 (37%), Positives = 126/223 (56%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+ES+ +L+ V PL HP+ +G++P G+LLYGPPGC KT +A A+ANE+
Sbjct: 626 WSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANES 685
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR-ENLQR-EM 240
G+ F I E+++ G SE +R+ F KA APSI+F DE+DA+A +R +L +
Sbjct: 686 GLNFLAIKGPELMNKYVGESERAVRETFRKARAVAPSIIFFDELDALAVERGSSLGAGNV 745
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRF 300
R++ QL+T MD +L V ++ ATNRPD +D AL RPGR
Sbjct: 746 ADRVLAQLLTEMDGIEQLKD-----------------VTILAATNRPDRIDKALMRPGRI 788
Query: 301 DREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
DR I + +PD R +I + ++ V DL ++ T +
Sbjct: 789 DRIIYVPLPDAATRREIFKLQFHSMPVSNEVDLDELILQTDAY 831
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 581 (209.6 bits), Expect = 2.5e-97, Sum P(2) = 2.5e-97
Identities = 126/311 (40%), Positives = 181/311 (58%)
Query: 386 RQPWLPEEMER--LTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDR 443
+QP LP+ + IT+ DF + ++PS+ RE +PNV W D+GGL+ ++ + +
Sbjct: 582 KQPNLPDSKVAGMVKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQ 641
Query: 444 YIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKY 503
+ +K P+ + G+ G LLYGPPGC KT+IAKA+ANE+G NF+ IKGPEL+NKY
Sbjct: 642 AVEWPLKHPKSFNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKY 701
Query: 504 VGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGW--VVERLLNQLLIELDGAD 561
VGESE AVR +F +AR +P I+FFDE+DAL +RG G V +R+L QLL E+DG +
Sbjct: 702 VGESERAVREIFRKARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIE 761
Query: 562 KRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDL 621
+ K V V+ ATNRPD +D+A++RPGR +++YVPLP R IL PI + VDL
Sbjct: 762 QLKNVTVLAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNEVDL 821
Query: 622 HTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKIS 681
+ + SG + +D I HF QALS ++
Sbjct: 822 DELVLQT--DTYSGAEIIAVCKEAALLA-----LEENIKADC----IMKRHFTQALSIVT 870
Query: 682 PSVSELQIQRY 692
P + E ++R+
Sbjct: 871 PRIPE-SLRRF 880
Score = 415 (151.1 bits), Expect = 2.5e-97, Sum P(2) = 2.5e-97
Identities = 93/253 (36%), Positives = 146/253 (57%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVP 185
+GG+ S L+ ++ + +PL P+L + G+ G+LLYGPPG GKT +A A+ANE G
Sbjct: 355 IGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAY 414
Query: 186 FYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIV 245
I+ E++S G +E +R +F++A PSI+FIDE+DA+ KRE Q E+E+R+V
Sbjct: 415 VSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQSEVEKRVV 474
Query: 246 TQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDREIV 305
L+T MD + G G VLV+GATNRP A+D ALRRPGRFD+EI
Sbjct: 475 ASLLTLMDG---IGSEGSE-----------GRVLVLGATNRPQALDAALRRPGRFDKEIE 520
Query: 306 LGVPDENARVQILSVLTRNL-RVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXXMKRII 364
+G+P+ R+ IL L R + + +L+++A + G+V ++R++
Sbjct: 521 IGIPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHALRRVL 580
Query: 365 DQRKSELSGNSIA 377
+++ L + +A
Sbjct: 581 -RKQPNLPDSKVA 592
Score = 370 (135.3 bits), Expect = 6.1e-31, P = 6.1e-31
Identities = 84/220 (38%), Positives = 127/220 (57%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+E++ +LK V PL HP+ +G++P G+LLYGPPGC KT +A A+ANE+
Sbjct: 626 WSDIGGLENIKLKLKQAVEWPLKHPKSFNRMGIQPPKGVLLYGPPGCSKTMIAKALANES 685
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQR--EM 240
G+ F I E+++ G SE +R++F KA APSI+F DE+DA+A +R + +
Sbjct: 686 GLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFDELDALAVERGSSSGAGNV 745
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRF 300
R++ QL+T MD +L V V+ ATNRPD +D AL RPGR
Sbjct: 746 ADRVLAQLLTEMDGIEQLKN-----------------VTVLAATNRPDRIDKALMRPGRI 788
Query: 301 DREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARST 340
DR I + +PD R +IL++ ++ + DL ++ T
Sbjct: 789 DRIIYVPLPDAATRREILNLQFHSMPISNEVDLDELVLQT 828
Score = 366 (133.9 bits), Expect = 1.7e-30, P = 1.7e-30
Identities = 80/192 (41%), Positives = 117/192 (60%)
Query: 426 VKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVAN 485
V ++ +GGL+ I +K PE ++ +G+ G LLYGPPG GKT+IA+AVAN
Sbjct: 350 VTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVAN 409
Query: 486 EAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWV 545
E GA I GPE+++K+ GE+E +R +F+ A P I+F DE+DAL KR V
Sbjct: 410 EVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQSEV 469
Query: 546 VERLLNQLLIELDG--ADKRKG-VFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDER 602
+R++ LL +DG ++ +G V V+GATNRP +D A+ RPGRF K + + +P +R
Sbjct: 470 EKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDR 529
Query: 603 GLILEALARKKP 614
IL+ L R+ P
Sbjct: 530 LDILQKLLRRVP 541
>UNIPROTKB|F8W938 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI01012615 ProteinModelPortal:F8W938 SMR:F8W938
Ensembl:ENST00000361463 ArrayExpress:F8W938 Bgee:F8W938
Uniprot:F8W938
Length = 589
Score = 959 (342.6 bits), Expect = 1.8e-96, P = 1.8e-96
Identities = 204/443 (46%), Positives = 277/443 (62%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
+F+D+GG + L+E+ ++++ + HP++ LGV P G+LL+GPPGCGKT LAHAIA E
Sbjct: 157 KFEDVGGNDMTLKEV-CKMLIHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGE 215
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREME 241
+P K++A E+VSGVSG SE+ +R+LF +A AP I+FIDEIDAI KRE ++ME
Sbjct: 216 LDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVASKDME 275
Query: 242 RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFD 301
RRIV QL+TCMD+ + + VLVIGATNRPD++DPALRR GRFD
Sbjct: 276 RRIVAQLLTCMDDLNNVAATAR--------------VLVIGATNRPDSLDPALRRAGRFD 321
Query: 302 REIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXXMK 361
REI LG+PDE +R +IL L R LR+ +FD +A TPGFV +
Sbjct: 322 REICLGIPDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVN 381
Query: 362 RII----DQRKS-----ELSGNSIAEQH---------SDDWWR--------QPWLPEEME 395
R++ +Q+K +L + E+ D+ R P E+M+
Sbjct: 382 RVLMKLQEQQKKNPEMEDLPSKGVQEERLGTEPTSETQDELQRLLGLLRDQDPLSEEQMQ 441
Query: 396 RLTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEY 455
L I + DF A VQPS++REGF +PNV W D+G L+ +R E I+ ++ P+++
Sbjct: 442 GLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQF 501
Query: 456 EEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLF 515
+ G+ G LL GPPGCGKTL+AKAVANE+G NFI +KGPELLN YVGESE AVR +F
Sbjct: 502 KALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVF 561
Query: 516 SRARTCSPCILFFDEVDALTTKR 538
RA+ +PC++FFDEVDAL +R
Sbjct: 562 QRAKNSAPCVIFFDEVDALCPRR 584
Score = 373 (136.4 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 86/224 (38%), Positives = 126/224 (56%)
Query: 406 EATKMVQPSSRREGFS-AIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLET 464
E ++Q ++ G I NVK+EDVGG D E + ++ ++ PE Y GV
Sbjct: 135 EIEAVLQKKAKARGLEFQISNVKFEDVGGNDMTLKEVCKMLIH-MRHPEVYHHLGVVPPR 193
Query: 465 GFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPC 524
G LL+GPPGCGKTL+A A+A E + + PE+++ GESE +R LF +A + +PC
Sbjct: 194 GVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPC 253
Query: 525 ILFFDEVDALTTKRGKEGGWVVERLLNQLLI---ELDGADKRKGVFVIGATNRPDVMDRA 581
I+F DE+DA+T KR + R++ QLL +L+ V VIGATNRPD +D A
Sbjct: 254 IIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPA 313
Query: 582 VLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
+ R GRF + + + +P R IL+ L RK + + D +A
Sbjct: 314 LRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFDFCHLA 357
Score = 254 (94.5 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 46/111 (41%), Positives = 73/111 (65%)
Query: 125 DLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGV 184
D+G +E + EEL M ++ P+ +P + LG+ AG+LL GPPGCGKT LA A+ANE+G+
Sbjct: 476 DIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGL 535
Query: 185 PFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKREN 235
F + E+++ G SE +R +F +A +AP ++F DE+DA+ +R +
Sbjct: 536 NFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSD 586
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 942 (336.7 bits), Expect = 1.1e-94, P = 1.1e-94
Identities = 209/580 (36%), Positives = 317/580 (54%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
FQ +GG++ +++++ + + Y L + GV+P GILLYGPPG GKT LA +A +T
Sbjct: 311 FQSIGGLDLQVKQIRELIDLSFYKLDLLKSFGVKPPKGILLYGPPGTGKTLLARIVATQT 370
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
+ I+ +++ G +E+ ++ +F A + +PSI+FIDE+DA+ KRE+ E+E+
Sbjct: 371 NATLFTINGADILDKFYGMTEKTLQKIFKDAAQKSPSIIFIDELDALCPKREDNSSEVEK 430
Query: 243 RIVTQLMTCMDE--SHRLVQPGXXXXXXXXXXXXPG-YVLVIGATNRPDAVDPALRRPGR 299
RIV L+T MD S G G V+VIG TNRPD++D ALRRPGR
Sbjct: 431 RIVGSLLTLMDGVVSTSDQNDGGGGDNGNGNGNCGGDKVIVIGCTNRPDSIDSALRRPGR 490
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVE-GSFDLVKIARSTPGFVXXXXXXXXXXXXXX 358
FD EI + +P++ R QIL++ + + S ++ IA T GFV
Sbjct: 491 FDNEIEISIPNQQGREQILNIFLSKIPNQLTSQEIAMIASKTHGFVGADIESLCKEASLK 550
Query: 359 XMKRIIDQRKSELSGNSIA-EQHSDDWWRQPWLPEEMERLTITMTDFEEATKMVQPSSRR 417
RI ++ + +I E+ + ++ L + + ++M D A V+PSS R
Sbjct: 551 CFNRIKNENQKLFQSINIEKEEKGKEEKQEENLQNLLSLIKLSMNDMLLALNQVKPSSMR 610
Query: 418 EGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKT 477
E IP V W D+GG ++++ + I +K+P+ + G+ G LLYGPPGC KT
Sbjct: 611 EVVVEIPKVFWGDIGGQEHIKQKLKEAIEWPLKYPQSFIRMGIKPPKGILLYGPPGCSKT 670
Query: 478 LIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTK 537
L+AKA+A E+G NFI +KGPELL+K+VGESE AVR +F +AR SP ILFFDE+D L
Sbjct: 671 LLAKALATESGLNFIAVKGPELLSKWVGESERAVRDIFKKARQNSPSILFFDEIDGLAIS 730
Query: 538 RGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLP 597
R EG VER+++QLL E+DG V +IGATNRPD++D+A+LR GR ++LY+ P
Sbjct: 731 RSGEGSGAVERVVSQLLTEMDGIQPLTNVTIIGATNRPDIIDKAILRAGRIDRILYISPP 790
Query: 598 TPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISS 657
D R I +K P +D++ + S + SG + +
Sbjct: 791 DLDARKEIFNIHLKKVPHSSDIDINQL--SILTDGYSGAEVTSICREAS-------IAAM 841
Query: 658 KSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSE 697
K D+ I ++HF A+ + +++ + YK E
Sbjct: 842 KE--DINAKEINMSHFISAIGNVKKGITQEMLDFYKDYQE 879
Score = 229 (85.7 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 50/135 (37%), Positives = 74/135 (54%)
Query: 425 NVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVA 484
N+ ++ +GGLD + I + + FGV G LLYGPPG GKTL+A+ VA
Sbjct: 308 NLNFQSIGGLDLQVKQIRELIDLSFYKLDLLKSFGVKPPKGILLYGPPGTGKTLLARIVA 367
Query: 485 NEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGW 544
+ A I G ++L+K+ G +E ++ +F A SP I+F DE+DAL KR
Sbjct: 368 TQTNATLFTINGADILDKFYGMTEKTLQKIFKDAAQKSPSIIFIDELDALCPKREDNSSE 427
Query: 545 VVERLLNQLLIELDG 559
V +R++ LL +DG
Sbjct: 428 VEKRIVGSLLTLMDG 442
>DICTYBASE|DDB_G0282181 [details] [associations]
symbol:nvl "valosin-containing protein" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISS] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282181 GO:GO:0005524 GO:GO:0005730
GenomeReviews:CM000152_GR EMBL:AAFI02000045 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0000055 KO:K14571
RefSeq:XP_640327.1 ProteinModelPortal:Q54SY2
EnsemblProtists:DDB0237516 GeneID:8623428 KEGG:ddi:DDB_G0282181
InParanoid:Q54SY2 OMA:KQIQYYK ProtClustDB:CLSZ2846768
Uniprot:Q54SY2
Length = 867
Score = 929 (332.1 bits), Expect = 2.7e-93, P = 2.7e-93
Identities = 211/542 (38%), Positives = 302/542 (55%)
Query: 171 KTKLAHAIANETGVPFY-KISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAI 229
+T ++AIA + F +I A + AS++ R + S+ S+ ++ ++
Sbjct: 299 RTLFSNAIAQAPCIIFIDEIDA--IAPKRESASKDMERRIVSQLLTCMDSLNYLSSNNS- 355
Query: 230 ASKRENLQREMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDA 289
+ N Q E +++ ++ ++ G+V+VIGATNRP++
Sbjct: 356 -TNEPNEQTEQQQQQQQDIIEVDSQATTTTTASNNNNKQQKNDFKKGHVIVIGATNRPES 414
Query: 290 VDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXX 349
+D ALR GRFD+EI LG+PD+ AR +IL V+T +R+E +FD +IA TPG+V
Sbjct: 415 LDTALRIGGRFDKEICLGIPDQTARCKILKVITSKMRLENNFDYEEIATLTPGYVGADIN 474
Query: 350 XXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDD------------WWRQPWLPEEMERL 397
+ RI + S +S + S ++P PE++ L
Sbjct: 475 LLVKEAATNSVNRIFTSNLNGASSSSSSSSSSTTNINNIGLSTELLISKEPLEPEKLNSL 534
Query: 398 TITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEE 457
I M DF++A K V P+++REGF+ IPNV W+DVG L +R E I+R I++P++Y+
Sbjct: 535 YIEMIDFKKALKKVVPAAKREGFATIPNVTWDDVGALSGVREELTNSILRPIRYPKKYKN 594
Query: 458 FGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSR 517
G+D G L+YGPPGCGKTL+AKA+A+E ANFI +KGPELLNKYVGESE AVR +F R
Sbjct: 595 MGIDSPAGVLMYGPPGCGKTLLAKAIASECQANFISVKGPELLNKYVGESERAVRQVFQR 654
Query: 518 ARTCSPCILFFDEVDALTTKRGK-EGGW--VVERLLNQLLIELDGADKRKGVFVIGATNR 574
A SPC++FFDE DAL KRG +GG ER++NQLL E+DG +KR VF+I ATNR
Sbjct: 655 AAASSPCVIFFDEFDALAPKRGGGDGGGNQATERVVNQLLTEMDGLEKRSEVFIIAATNR 714
Query: 575 PDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLS 634
PD++D A+ RPGR K++YVPLP+P+ER IL+ L K PI VDL + C + S
Sbjct: 715 PDIIDAAMCRPGRLDKMVYVPLPSPEERCEILKTLTHKIPIHQDVDLIKVGTDLRCHSFS 774
Query: 635 GXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKT 694
G ++ + D T+ + F ALSKI PSVS Y
Sbjct: 775 GADLSLLVKEAANHAISRGFDNNSTEPD----TVTMEDFIFALSKIKPSVSRKDELMYDK 830
Query: 695 LS 696
L+
Sbjct: 831 LN 832
Score = 395 (144.1 bits), Expect = 8.0e-34, P = 8.0e-34
Identities = 78/136 (57%), Positives = 98/136 (72%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
F +LGG+ES L +++ + P+ HP++ LGV P GILL+GP GCGKT LA AIA E
Sbjct: 215 FSNLGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKAIAGEL 274
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
VP + ISATE+ SGVSG SE +R LFS A AP I+FIDEIDAIA KRE+ ++MER
Sbjct: 275 KVPLFAISATEITSGVSGESEARVRTLFSNAIAQAPCIIFIDEIDAIAPKRESASKDMER 334
Query: 243 RIVTQLMTCMDESHRL 258
RIV+QL+TCMD + L
Sbjct: 335 RIVSQLLTCMDSLNYL 350
Score = 344 (126.2 bits), Expect = 4.6e-28, P = 4.6e-28
Identities = 75/217 (34%), Positives = 119/217 (54%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+G + V EEL ++ P+ +P+ + +G+ AG+L+YGPPGCGKT LA AIA+E
Sbjct: 565 WDDVGALSGVREELTNSILRPIRYPKKYKNMGIDSPAGVLMYGPPGCGKTLLAKAIASEC 624
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR---ENLQRE 239
F + E+++ G SE +R +F +A ++P ++F DE DA+A KR + +
Sbjct: 625 QANFISVKGPELLNKYVGESERAVRQVFQRAAASSPCVIFFDEFDALAPKRGGGDGGGNQ 684
Query: 240 MERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
R+V QL+T MD + + V +I ATNRPD +D A+ RPGR
Sbjct: 685 ATERVVNQLLTEMDGLEKRSE-----------------VFIIAATNRPDIIDAAMCRPGR 727
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKI 336
D+ + + +P R +IL LT + + DL+K+
Sbjct: 728 LDKMVYVPLPSPEERCEILKTLTHKIPIHQDVDLIKV 764
Score = 261 (96.9 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 55/136 (40%), Positives = 78/136 (57%)
Query: 423 IPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKA 482
IP + + ++GG++ + +I I PE Y GV+ G LL+GP GCGKTL+AKA
Sbjct: 210 IPTINFSNLGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKA 269
Query: 483 VANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEG 542
+A E I E+ + GESE VRTLFS A +PCI+F DE+DA+ KR
Sbjct: 270 IAGELKVPLFAISATEITSGVSGESEARVRTLFSNAIAQAPCIIFIDEIDAIAPKRESAS 329
Query: 543 GWVVERLLNQLLIELD 558
+ R+++QLL +D
Sbjct: 330 KDMERRIVSQLLTCMD 345
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 766 (274.7 bits), Expect = 6.2e-93, Sum P(2) = 6.2e-93
Identities = 166/440 (37%), Positives = 247/440 (56%)
Query: 277 YVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKI 336
+V+V+ ATNRP+++DPALRR GRFDRE+ +G+PD R++IL + T+N+++ DL ++
Sbjct: 72 HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQV 131
Query: 337 ARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMER 396
T G V +++ +D +L +I D E M
Sbjct: 132 GNETHGHVGADLAALCSEAALQAIRKKMDL--IDLEDETI------D-------AEVMNS 176
Query: 397 LTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
L +TM DF A PS+ RE +P V WED+GGL+ ++ E + ++ P+++
Sbjct: 177 LAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFL 236
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
+FG+ G L YGPPGCGKTL+AKA+ANE ANFI IKGPELL + GESE VR +F
Sbjct: 237 KFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFD 296
Query: 517 RARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
+AR +PC+LFFDE+D++ RG +GG +R++NQ+L E+DG +K VF+IGATN
Sbjct: 297 KARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATN 356
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ------- 626
RPD++D A+LRPGR +L+Y+PLP R IL+A RK P+ VDL +A+
Sbjct: 357 RPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSG 416
Query: 627 ---SKFCENLSGXXXXXXXXXXXXXXXXXKLISSK---SSSDVTPFTIKLTHFEQALSKI 680
++ C+ + S D P I+ HFE+A+
Sbjct: 417 ADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVP-EIRRDHFEEAMRFA 475
Query: 681 SPSVSELQIQRYKTLSETFK 700
SVS+ I++Y+ ++T +
Sbjct: 476 RRSVSDNDIRKYEMFAQTLQ 495
Score = 381 (139.2 bits), Expect = 1.9e-33, P = 1.9e-33
Identities = 107/312 (34%), Positives = 152/312 (48%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++D+GG+E V EL+ V P+ HP G+ P G+L YGPPGCGKT LA AIANE
Sbjct: 208 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 267
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE-NLQRE-- 239
F I E+++ G SE N+R++F KA + AP ++F DE+D+IA R N+
Sbjct: 268 QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGG 327
Query: 240 MERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
R++ Q++T MD G V +IGATNRPD +DPA+ RPGR
Sbjct: 328 AADRVINQILTEMD--------GMSTKKN---------VFIIGATNRPDIIDPAILRPGR 370
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXX 359
D+ I + +PDE +RV IL R V DL +A+ T GF
Sbjct: 371 LDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLA 430
Query: 360 MKRIID---QRKSELSGN-SIAEQHSDD---WWRQPWLPEEME--RLTITMTDFEEATKM 410
++ I+ +R+ E N S E DD R+ E M R +++ D +
Sbjct: 431 IRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMF 490
Query: 411 VQPSSRREGFSA 422
Q + GF +
Sbjct: 491 AQTLQQSRGFGS 502
Score = 232 (86.7 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 51/129 (39%), Positives = 76/129 (58%)
Query: 496 GPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLI 555
GPE+++K GESE +R F A +P I+F DE+DA+ KR K G V R+++QLL
Sbjct: 3 GPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLT 62
Query: 556 ELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPI 615
+DG +R V V+ ATNRP+ +D A+ R GRF + + + +P R IL+ + +
Sbjct: 63 LMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKL 122
Query: 616 DDSVDLHTI 624
D VDL +
Sbjct: 123 ADDVDLEQV 131
Score = 179 (68.1 bits), Expect = 6.2e-93, Sum P(2) = 6.2e-93
Identities = 35/64 (54%), Positives = 48/64 (75%)
Query: 190 SATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIVTQLM 249
S E++S ++G SE N+R F +A + AP+I+FIDE+DAIA KRE E+ERRIV+QL+
Sbjct: 2 SGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLL 61
Query: 250 TCMD 253
T MD
Sbjct: 62 TLMD 65
>UNIPROTKB|F1RQN5 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
Uniprot:F1RQN5
Length = 778
Score = 498 (180.4 bits), Expect = 1.1e-90, Sum P(2) = 1.1e-90
Identities = 97/203 (47%), Positives = 138/203 (67%)
Query: 386 RQPWLPEEMER--LTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDR 443
+QP LP+ + IT+ DF + ++PS+ RE +PNV W D+GGL+ ++ + +
Sbjct: 576 KQPNLPDSKVAGLVKITLKDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQ 635
Query: 444 YIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKY 503
+ +K PE + + G+ G LLYGPPGC KT+IAKA+ANE+G NF+ IKGPEL+NKY
Sbjct: 636 AVEWPLKHPESFTQMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKY 695
Query: 504 VGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGW--VVERLLNQLLIELDGAD 561
VGESE AVR +F +AR +P I+FFDE+DAL +RG G V +R+L QLL E+DG +
Sbjct: 696 VGESERAVREIFRKARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIE 755
Query: 562 KRKGVFVIGATNRPDVMDRAVLR 584
+ K V ++ ATNRPD +D+ +LR
Sbjct: 756 QLKDVTILAATNRPDRIDKELLR 778
Score = 435 (158.2 bits), Expect = 1.1e-90, Sum P(2) = 1.1e-90
Identities = 97/253 (38%), Positives = 148/253 (58%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVP 185
+GG+ S L+E++ + +PL P+L + G+ P G+LLYGPPG GKT +A A+ANE G
Sbjct: 349 IGGLNSQLKEIREIIELPLKQPELFKSYGISPPRGVLLYGPPGTGKTMIARAVANEVGAY 408
Query: 186 FYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIV 245
I+ E++S G +E +R +F++A PSI+FIDE+DA+ KRE Q E+E+R+V
Sbjct: 409 VSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEVEKRVV 468
Query: 246 TQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDREIV 305
L+T MD + G G VLV+GATNRP A+D ALRRPGRFD+EI
Sbjct: 469 ASLLTLMDG---IGSEGSE-----------GQVLVLGATNRPHALDAALRRPGRFDKEIE 514
Query: 306 LGVPDENARVQILSVLTRNL-RVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXXMKRII 364
+GVP+ R+ IL L R + + +L+++A S G+V ++R++
Sbjct: 515 IGVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLYALRRVL 574
Query: 365 DQRKSELSGNSIA 377
+++ L + +A
Sbjct: 575 -RKQPNLPDSKVA 586
Score = 368 (134.6 bits), Expect = 7.2e-31, P = 7.2e-31
Identities = 81/192 (42%), Positives = 118/192 (61%)
Query: 426 VKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVAN 485
V ++ +GGL+ E I +K PE ++ +G+ G LLYGPPG GKT+IA+AVAN
Sbjct: 344 VTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGISPPRGVLLYGPPGTGKTMIARAVAN 403
Query: 486 EAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWV 545
E GA I GPE+++K+ GE+E +R +F+ A P I+F DE+DAL KR V
Sbjct: 404 EVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEV 463
Query: 546 VERLLNQLLIELDG--ADKRKG-VFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDER 602
+R++ LL +DG ++ +G V V+GATNRP +D A+ RPGRF K + + +P +R
Sbjct: 464 EKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDR 523
Query: 603 GLILEALARKKP 614
IL+ L R+ P
Sbjct: 524 LDILQKLLRRVP 535
Score = 299 (110.3 bits), Expect = 3.6e-23, P = 3.6e-23
Identities = 68/176 (38%), Positives = 102/176 (57%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+E++ +LK V PL HP+ +G++P G+LLYGPPGC KT +A A+ANE+
Sbjct: 620 WSDIGGLENIKLKLKQAVEWPLKHPESFTQMGIQPPKGVLLYGPPGCSKTMIAKALANES 679
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQR--EM 240
G+ F I E+++ G SE +R++F KA APSI+F DE+DA+A +R + +
Sbjct: 680 GLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFDELDALAVERGSSSGAGNV 739
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRR 296
R++ QL+T MD +L V ++ ATNRPD +D L R
Sbjct: 740 ADRVLAQLLTEMDGIEQLKD-----------------VTILAATNRPDRIDKELLR 778
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 553 (199.7 bits), Expect = 1.1e-90, Sum P(3) = 1.1e-90
Identities = 124/306 (40%), Positives = 180/306 (58%)
Query: 397 LTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
L++ DFE A ++PS+ RE +P V WEDVGG + ++++ + K + ++
Sbjct: 692 LSVGFEDFENAKTKIRPSAMREVILEVPKVNWEDVGGQNEVKNQLMEAVEWPQKHQDAFK 751
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
G +G L++GPPGC KTL+A+AVA+EA NF+ +KGPEL +K+VGESE AVR+LF+
Sbjct: 752 RIGTRPPSGILMFGPPGCSKTLMARAVASEAKLNFLAVKGPELFSKWVGESEKAVRSLFA 811
Query: 517 RARTCSPCILFFDEVDALTTKRGKE--GGWVVERLLNQLLIELDGADKRKGVFVIGATNR 574
+AR +P I+FFDE+D+L + RGKE G V +R+++QLL+ELDG +R GV VI ATNR
Sbjct: 812 KARANAPSIIFFDEIDSLASIRGKENDGVSVSDRVMSQLLVELDGLHQRVGVTVIAATNR 871
Query: 575 PDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLS 634
PD +D A+LRPGRF +LLYV P +R IL+ RK P + L +A + +
Sbjct: 872 PDKIDSALLRPGRFDRLLYVGPPNETDREAILKIHLRKIPCSSDICLKELAS--ITKGYT 929
Query: 635 GXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKT 694
G L + I + H + A+S+I P+ +I YK
Sbjct: 930 GADISLICREAAIAALEESLEMEE---------ISMRHLKAAISQIEPT----EILSYKA 976
Query: 695 LSETFK 700
LSE F+
Sbjct: 977 LSEKFQ 982
Score = 361 (132.1 bits), Expect = 8.2e-30, P = 8.2e-30
Identities = 97/298 (32%), Positives = 150/298 (50%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++D+GG V +L V P H + +G RP +GIL++GPPGC KT +A A+A+E
Sbjct: 723 WEDVGGQNEVKNQLMEAVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSKTLMARAVASEA 782
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR--ENLQREM 240
+ F + E+ S G SE+ +R LF+KA APSI+F DEID++AS R EN +
Sbjct: 783 KLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDSLASIRGKENDGVSV 842
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRF 300
R+++QL+ +D H+ V G V VI ATNRPD +D AL RPGRF
Sbjct: 843 SDRVMSQLLVELDGLHQRV----------------G-VTVIAATNRPDKIDSALLRPGRF 885
Query: 301 DREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXXM 360
DR + +G P+E R IL + R + L ++A T G+ +
Sbjct: 886 DRLLYVGPPNETDREAILKIHLRKIPCSSDICLKELASITKGYTGADISLICREAAIAAL 945
Query: 361 KRIIDQRKSELSG--NSIAEQHSDDWWRQPWLPEEMERLTITMTDFEEATKMVQPSSR 416
+ ++ + + +I++ + L E+ +RL T EE ++ QP ++
Sbjct: 946 EESLEMEEISMRHLKAAISQIEPTEILSYKALSEKFQRLVHTDPQREE--EVTQPGNK 1001
Score = 310 (114.2 bits), Expect = 3.6e-24, P = 3.6e-24
Identities = 66/182 (36%), Positives = 105/182 (57%)
Query: 431 VGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGAN 490
+GGL + R I+ G+ G L++GPPG GKT +A+ A +G N
Sbjct: 387 LGGLSK-EYAILRDIIDSSSIKNSLSSLGLRPTKGVLIHGPPGTGKTSLARTFARHSGVN 445
Query: 491 FIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVV-ERL 549
F + GPE++++Y+GESE A+ +F A +P ++F D++DA+ R KEGG + +R+
Sbjct: 446 FFSVNGPEIISQYLGESEKALDEVFRSASNATPAVVFIDDLDAIAPAR-KEGGEELSQRM 504
Query: 550 LNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEAL 609
+ LL +DG + GV VI ATNRPD ++ A+ RPGR + + + +P+ +R IL +
Sbjct: 505 VATLLNLMDGISRTDGVVVIAATNRPDSIEPALRRPGRLDREIEIGVPSSTQRSDILHII 564
Query: 610 AR 611
R
Sbjct: 565 LR 566
Score = 229 (85.7 bits), Expect = 1.1e-90, Sum P(3) = 1.1e-90
Identities = 42/101 (41%), Positives = 65/101 (64%)
Query: 153 LGVRPMAGILLYGPPGCGKTKLAHAIANETGVPFYKISATEVVSGVSGASEENIRDLFSK 212
LG+RP G+L++GPPG GKT LA A +GV F+ ++ E++S G SE+ + ++F
Sbjct: 413 LGLRPTKGVLIHGPPGTGKTSLARTFARHSGVNFFSVNGPEIISQYLGESEKALDEVFRS 472
Query: 213 AYRTAPSIVFIDEIDAIASKRENLQREMERRIVTQLMTCMD 253
A P++VFID++DAIA R+ E+ +R+V L+ MD
Sbjct: 473 ASNATPAVVFIDDLDAIAPARKEGGEELSQRMVATLLNLMD 513
Score = 181 (68.8 bits), Expect = 1.1e-90, Sum P(3) = 1.1e-90
Identities = 43/110 (39%), Positives = 60/110 (54%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVE-GSFDLVKI 336
V+VI ATNRPD+++PALRRPGR DREI +GVP R IL ++ R +R + + ++
Sbjct: 521 VVVIAATNRPDSIEPALRRPGRLDREIEIGVPSSTQRSDILHIILRGMRHSLSNIQVEQL 580
Query: 337 ARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSE----LSGNSIAEQHSD 382
A +T GFV ++R +DQ S L IAE S+
Sbjct: 581 AMATHGFVGADLSALCCEAAFVCLRRHLDQSSSSSNLPLEEAPIAESSSN 630
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 496 (179.7 bits), Expect = 1.6e-90, Sum P(2) = 1.6e-90
Identities = 98/199 (49%), Positives = 137/199 (68%)
Query: 386 RQPWLPE-EMERLT-ITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDR 443
RQP LP+ +M L IT+ DF + ++PS+ RE +PNV W D+GGL+ ++ + +
Sbjct: 573 RQPNLPDSKMAGLVKITLKDFLQGMNDIRPSAMREVAVDVPNVSWSDIGGLENVKLKLKQ 632
Query: 444 YIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKY 503
+ +K PE + + G+ G LLYGPPGC KT+IAKA+ANE+G NF+ IKGPEL+NKY
Sbjct: 633 AVEWPLKHPESFTQMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKY 692
Query: 504 VGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGW--VVERLLNQLLIELDGAD 561
VGESE AVR +F +AR +P I+FFDE+DAL +RG G V +R+L QLL E+DG +
Sbjct: 693 VGESERAVREIFRKARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIE 752
Query: 562 KRKGVFVIGATNRPDVMDR 580
+ K V ++ ATNRPD +D+
Sbjct: 753 QLKNVTILAATNRPDRIDK 771
Score = 435 (158.2 bits), Expect = 1.6e-90, Sum P(2) = 1.6e-90
Identities = 98/253 (38%), Positives = 148/253 (58%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVP 185
+GG+ S L+E++ + +PL P+L + G+ P G+LLYGPPG GKT +A A+ANE G
Sbjct: 346 IGGLNSQLKEIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVANEVGAY 405
Query: 186 FYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIV 245
I+ E++S G +E +R +F++A PSI+FIDE+DA+ KRE Q E+E+R+V
Sbjct: 406 VSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEVEKRVV 465
Query: 246 TQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDREIV 305
L+T MD + G G VLV+GATNRP A+D ALRRPGRFD+EI
Sbjct: 466 ASLLTLMDG---IGSEGSE-----------GQVLVLGATNRPHALDAALRRPGRFDKEIE 511
Query: 306 LGVPDENARVQILSVLTRNL-RVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXXMKRII 364
+GVP+ R+ IL L R + + +L+++A S G+V ++R++
Sbjct: 512 IGVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLHALRRVL 571
Query: 365 DQRKSELSGNSIA 377
+R+ L + +A
Sbjct: 572 -RRQPNLPDSKMA 583
Score = 367 (134.2 bits), Expect = 9.1e-31, P = 9.1e-31
Identities = 81/192 (42%), Positives = 118/192 (61%)
Query: 426 VKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVAN 485
V ++ +GGL+ E I +K PE ++ +G+ G LLYGPPG GKT+IA+AVAN
Sbjct: 341 VTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVAN 400
Query: 486 EAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWV 545
E GA I GPE+++K+ GE+E +R +F+ A P I+F DE+DAL KR V
Sbjct: 401 EVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEV 460
Query: 546 VERLLNQLLIELDG--ADKRKG-VFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDER 602
+R++ LL +DG ++ +G V V+GATNRP +D A+ RPGRF K + + +P +R
Sbjct: 461 EKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDR 520
Query: 603 GLILEALARKKP 614
IL+ L R+ P
Sbjct: 521 LDILQKLLRRVP 532
Score = 295 (108.9 bits), Expect = 9.7e-23, P = 9.7e-23
Identities = 67/171 (39%), Positives = 100/171 (58%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+E+V +LK V PL HP+ +G++P G+LLYGPPGC KT +A A+ANE+
Sbjct: 617 WSDIGGLENVKLKLKQAVEWPLKHPESFTQMGIQPPKGVLLYGPPGCSKTMIAKALANES 676
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQR--EM 240
G+ F I E+++ G SE +R++F KA APSI+F DE+DA+A +R + +
Sbjct: 677 GLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFDELDALAVERGSSSGAGNV 736
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVD 291
R++ QL+T MD +L V ++ ATNRPD +D
Sbjct: 737 ADRVLAQLLTEMDGIEQLKN-----------------VTILAATNRPDRID 770
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 509 (184.2 bits), Expect = 6.5e-90, Sum P(4) = 6.5e-90
Identities = 116/300 (38%), Positives = 166/300 (55%)
Query: 399 ITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEF 458
+ M D E A V+ S+ RE PNV W D+GG + ++ + + + E +
Sbjct: 518 VQMDDLEFALSSVRQSAMREFMMESPNVHWSDIGGQEEVKQKLKESVEWPLTHGETFSRL 577
Query: 459 GVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRA 518
GV G LLYGPPGC KT+ AKA+A E G NFI +KGPEL +K+VGESE AVR +F +A
Sbjct: 578 GVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFVGESERAVRQVFQKA 637
Query: 519 RTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVM 578
R SP ++FFDE+DALT RG++ +R++ LL ELDG + + V V+ ATNRPD++
Sbjct: 638 RQASPSVIFFDEIDALTANRGEDNS--SDRVVAALLNELDGIEALRNVLVLAATNRPDMI 695
Query: 579 DRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXX 638
D A++RPGR +LLYV P + R I++ A K + VDL IA+ E SG
Sbjct: 696 DPALMRPGRLDRLLYVGPPNFEARKQIVKIQAEKMKFAEDVDLDLIAEKT--EGCSGAEV 753
Query: 639 XXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSET 698
LI+ D+ I HF+ AL + +++ ++ Y + SE+
Sbjct: 754 VALCQEAG-------LIAMHE--DLEAKEICQAHFKTALLALRKAITRDMLEYYASFSES 804
Score = 328 (120.5 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 93/297 (31%), Positives = 139/297 (46%)
Query: 393 EMERLTITMTDFEEATKMV--QPSSRREGFSAIPN-VKWEDVGGLDYLRHEFDRYIVRRI 449
E+E + E+ T+ Q S + F P+ V + +GGL + +
Sbjct: 240 EIETPDLLKLPHEDRTQSAYNQGSEETQNFDGPPSAVTFSSIGGLQAQIAQIRDIVELPF 299
Query: 450 KFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESEL 509
+ PE ++ F + G LLYGPPG GKT++ +AVA EA A I GP ++ KY+GE+E
Sbjct: 300 QNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEANAQVFTIDGPSVVGKYLGETES 359
Query: 510 AVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVI 569
+R +F AR P I+F DE+DAL KR ++ R + LL LDG V VI
Sbjct: 360 RLRKIFEDARAHQPSIIFIDEIDALAPKRTEDVSEAESRAVATLLTLLDGMANAGKVVVI 419
Query: 570 GATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKP--IDDSVDLHTIAQS 627
ATNRP+ +D A+ RPGR K + + +P R I++ L P I+D+ L +A
Sbjct: 420 AATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIKLLLSGVPNEINDA-QLEDLASR 478
Query: 628 KFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPF-TIKLTHFEQALSKISPS 683
G + K +S + F +++ E ALS + S
Sbjct: 479 THA--YVGADLAAVVREAALRAIKRTISLQKDTSGLDIFGAVQMDDLEFALSSVRQS 533
Score = 266 (98.7 bits), Expect = 6.1e-30, Sum P(3) = 6.1e-30
Identities = 56/131 (42%), Positives = 77/131 (58%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG E V ++LK V PL H + LGVRP G+LLYGPPGC KT A AIA ET
Sbjct: 547 WSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAKAIATET 606
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
G+ F + E+ G SE +R +F KA + +PS++F DEIDA+ + R +
Sbjct: 607 GLNFIAVKGPELFDKFVGESERAVRQVFQKARQASPSVIFFDEIDALTANRG--EDNSSD 664
Query: 243 RIVTQLMTCMD 253
R+V L+ +D
Sbjct: 665 RVVAALLNELD 675
Score = 249 (92.7 bits), Expect = 6.5e-90, Sum P(4) = 6.5e-90
Identities = 50/131 (38%), Positives = 75/131 (57%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
F +GG+++ + +++ V +P +P+L ++ + P G+LLYGPPG GKT + A+A E
Sbjct: 278 FSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEA 337
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
+ I VV G +E +R +F A PSI+FIDEIDA+A KR E E
Sbjct: 338 NAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKRTEDVSEAES 397
Query: 243 RIVTQLMTCMD 253
R V L+T +D
Sbjct: 398 RAVATLLTLLD 408
Score = 163 (62.4 bits), Expect = 6.5e-90, Sum P(4) = 6.5e-90
Identities = 38/102 (37%), Positives = 57/102 (55%)
Query: 276 GYVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVE-GSFDLV 334
G V+VI ATNRP+++D ALRRPGR ++EI +G+PD++AR+ I+ +L + E L
Sbjct: 414 GKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIKLLLSGVPNEINDAQLE 473
Query: 335 KIARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSI 376
+A T +V +KR I +K + SG I
Sbjct: 474 DLASRTHAYVGADLAAVVREAALRAIKRTISLQK-DTSGLDI 514
Score = 151 (58.2 bits), Expect = 6.1e-30, Sum P(3) = 6.1e-30
Identities = 31/65 (47%), Positives = 40/65 (61%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
VLV+ ATNRPD +DPAL RPGR DR + +G P+ AR QI+ + ++ DL IA
Sbjct: 683 VLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQIVKIQAEKMKFAEDVDLDLIA 742
Query: 338 RSTPG 342
T G
Sbjct: 743 EKTEG 747
Score = 39 (18.8 bits), Expect = 6.5e-90, Sum P(4) = 6.5e-90
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 64 ESKITRRKSEEKNIEFEVMPRKIDLVNA 91
ES + KS KN+ E M +I +N+
Sbjct: 138 ESPMNMAKSGSKNLSSENMATEIFEINS 165
>RGD|1310478 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:1310478 GO:GO:0005524 GO:GO:0005737 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:CH473961 SMART:SM01073
CTD:166378 OrthoDB:EOG43FGWF EMBL:AC116183 IPI:IPI00373191
RefSeq:NP_001102019.1 UniGene:Rn.116828 Ensembl:ENSRNOT00000023584
GeneID:361935 KEGG:rno:361935 UCSC:RGD:1310478 NextBio:678104
Uniprot:D4A6T1
Length = 838
Score = 488 (176.8 bits), Expect = 8.6e-90, Sum P(3) = 8.6e-90
Identities = 95/201 (47%), Positives = 135/201 (67%)
Query: 386 RQPWLPEEMER--LTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDR 443
+QP LP+ + IT+ DF + ++PS+ RE +PNV W D+GGL+ ++ + +
Sbjct: 582 KQPNLPDSKVAGMVKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQ 641
Query: 444 YIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKY 503
+ +K P+ + G+ G LLYGPPGC KT+IAKA+ANE+G NF+ IKGPEL+NKY
Sbjct: 642 AVEWPLKHPKSFSRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKY 701
Query: 504 VGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGW--VVERLLNQLLIELDGAD 561
VGESE AVR +F +AR +P I+FFDE+DAL +RG G V +R+L QLL E+DG +
Sbjct: 702 VGESERAVREVFRKARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIE 761
Query: 562 KRKGVFVIGATNRPDVMDRAV 582
+ K V V+ ATNRPD +D+ +
Sbjct: 762 QLKNVTVLAATNRPDRIDKII 782
Score = 415 (151.1 bits), Expect = 8.6e-90, Sum P(3) = 8.6e-90
Identities = 93/253 (36%), Positives = 146/253 (57%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVP 185
+GG+ S L+ ++ + +PL P+L + G+ G+LLYGPPG GKT +A A+ANE G
Sbjct: 355 IGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAY 414
Query: 186 FYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIV 245
I+ E++S G +E +R +F++A PSI+FIDE+DA+ KRE Q E+E+R+V
Sbjct: 415 VSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQSEVEKRVV 474
Query: 246 TQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDREIV 305
L+T MD + G G VLV+GATNRP A+D ALRRPGRFD+EI
Sbjct: 475 ASLLTLMDG---IGSEGSE-----------GRVLVLGATNRPQALDAALRRPGRFDKEIE 520
Query: 306 LGVPDENARVQILSVLTRNL-RVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXXMKRII 364
+G+P+ R+ IL L R + + +L+++A + G+V ++R++
Sbjct: 521 IGIPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLYALRRVL 580
Query: 365 DQRKSELSGNSIA 377
+++ L + +A
Sbjct: 581 -RKQPNLPDSKVA 592
Score = 366 (133.9 bits), Expect = 1.0e-30, Sum P(2) = 1.0e-30
Identities = 80/192 (41%), Positives = 117/192 (60%)
Query: 426 VKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVAN 485
V ++ +GGL+ I +K PE ++ +G+ G LLYGPPG GKT+IA+AVAN
Sbjct: 350 VTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVAN 409
Query: 486 EAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWV 545
E GA I GPE+++K+ GE+E +R +F+ A P I+F DE+DAL KR V
Sbjct: 410 EVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQSEV 469
Query: 546 VERLLNQLLIELDG--ADKRKG-VFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDER 602
+R++ LL +DG ++ +G V V+GATNRP +D A+ RPGRF K + + +P +R
Sbjct: 470 EKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDR 529
Query: 603 GLILEALARKKP 614
IL+ L R+ P
Sbjct: 530 LDILQKLLRRVP 541
Score = 293 (108.2 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 67/171 (39%), Positives = 100/171 (58%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+E++ +LK V PL HP+ +G++P G+LLYGPPGC KT +A A+ANE+
Sbjct: 626 WSDIGGLENIKLKLKQAVEWPLKHPKSFSRMGIQPPKGVLLYGPPGCSKTMIAKALANES 685
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQR--EM 240
G+ F I E+++ G SE +R++F KA APSI+F DE+DA+A +R + +
Sbjct: 686 GLNFLAIKGPELMNKYVGESERAVREVFRKARAVAPSIIFFDELDALAVERGSSSGAGNV 745
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVD 291
R++ QL+T MD +L V V+ ATNRPD +D
Sbjct: 746 ADRVLAQLLTEMDGIEQLKN-----------------VTVLAATNRPDRID 779
Score = 46 (21.3 bits), Expect = 8.6e-90, Sum P(3) = 8.6e-90
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 672 HFEQALSKISPSVSELQIQRY 692
HF QALS ++P + E ++R+
Sbjct: 806 HFTQALSIVTPRIPE-SLRRF 825
>UNIPROTKB|G4ML45 [details] [associations]
symbol:MGG_06686 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001231 KO:K14571
RefSeq:XP_003709393.1 ProteinModelPortal:G4ML45
EnsemblFungi:MGG_06686T0 GeneID:2684859 KEGG:mgr:MGG_06686
Uniprot:G4ML45
Length = 770
Score = 893 (319.4 bits), Expect = 1.7e-89, P = 1.7e-89
Identities = 219/591 (37%), Positives = 317/591 (53%)
Query: 121 PRFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIAN 180
P+ +D+GG+ +LE L+ +++PL + +G +P A ILL+GP G GKT + A+A+
Sbjct: 194 PKLEDMGGISQILEALEKPLVLPLRMGEEYARMGHKPQAAILLHGPSGTGKTAVVRALAD 253
Query: 181 ETGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREM 240
F +SAT +VSG+SG SE+NIR+ F +A R AP ++F+DE+D +A K + Q+ M
Sbjct: 254 TLQCAFVPVSATSLVSGISGESEKNIREAFDEAIRLAPCLLFLDEVDVVAGKMDGAQKAM 313
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRR---- 296
E R+ +++ +D+ R PG V+VI ATNRPD+++P +RR
Sbjct: 314 EVRMSSEISQGLDKIVRCTSPGRN-------------VVVIAATNRPDSIEPTVRRRFQE 360
Query: 297 -----PGRFDREIVLGVPDENARVQILSVLTRNLRVEGSF---DL---VKIARSTPGF-V 344
P RE +L N R+ T R+ + DL V A S V
Sbjct: 361 LEMSMPDEAARESILRTMTRNKRLSDDVDFTALARLTPGYVGADLATAVDFAASEAMMAV 420
Query: 345 XXXXXXXXXXXXXXXMKRIIDQRKSE--LSGNSIAEQHSDDWWRQPWLPEEMERLTITMT 402
++D+ + L S D+ Q L + E + IT
Sbjct: 421 YTAKISRLTAAVATGSPSVVDRIRLPWTLPAESNEAPPIDNQEMQ--LDQNDEDICITFA 478
Query: 403 DFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDL 462
++A +QP+++REGFS +PN W +VG L +R + + IV+ I+ PE++ G+
Sbjct: 479 HLKQAIARIQPAAKREGFSTVPNTTWSEVGALQNVRKKLEYAIVQPIERPEKFAALGIKP 538
Query: 463 ETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCS 522
G LL+GPPGCGKTL+AKAVAN + ANFI IKGPELLNKYVGESE VR LFSRA++ +
Sbjct: 539 SAGILLWGPPGCGKTLVAKAVANASKANFISIKGPELLNKYVGESEYNVRQLFSRAKSSA 598
Query: 523 PCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAV 582
PCILFFDE+DAL R R++N LL ELDG R+G++VIGATNRPD +D A+
Sbjct: 599 PCILFFDELDALVPTRDFTMSGATSRVVNALLTELDGVGDRQGIYVIGATNRPDSIDEAI 658
Query: 583 LRPGRFGKLLYVPLPTPDERGLILEALARKK-P---IDDSV--DLHTIAQSKFCENLSGX 636
RPGR G +YV LPTP++R IL + P D+V + +A+ C +G
Sbjct: 659 RRPGRLGTDIYVGLPTPEDRFDILRTIYETTVPGGRAPDAVRKTIERVARDPRCGKFTGA 718
Query: 637 XXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPSVSEL 687
+I + D P I +E+AL ++ PSV ++
Sbjct: 719 DLRQLLTAASEAC----MI--RVQDDEAPM-ISEEDWERALDEVKPSVKDI 762
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 521 (188.5 bits), Expect = 1.5e-88, Sum P(2) = 1.5e-88
Identities = 115/298 (38%), Positives = 166/298 (55%)
Query: 397 LTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
L +T+ D E A ++PS+ RE F +P V W D+GG + L+ + I ++ E +
Sbjct: 484 LKVTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETFA 543
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
G+ G LLYGPPGC KTL AKA+A E+G NF+ +KGPE+ NKYVGESE A+R +F
Sbjct: 544 RLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIFR 603
Query: 517 RARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPD 576
+AR+ +P I+FFDE+DAL+ R +L LL E+DG ++ KGV ++ ATNRPD
Sbjct: 604 KARSAAPSIIFFDEIDALSPDRDGSSTSAANHVLTSLLNEIDGVEELKGVVIVAATNRPD 663
Query: 577 VMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDS-VDLHTIAQSKFCENLSG 635
+D A+LRPGR + +YV P + R IL+ +K ++S VDLH +A E SG
Sbjct: 664 EIDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLHELADRT--EGYSG 721
Query: 636 XXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYK 693
L DV ++L HFE+A I+ ++ + Y+
Sbjct: 722 AEVVLLCQEAGLAAIMEDL-------DVAK--VELRHFEKAFKGIARGITPEMLSYYE 770
Score = 389 (142.0 bits), Expect = 1.5e-88, Sum P(2) = 1.5e-88
Identities = 94/224 (41%), Positives = 130/224 (58%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVP 185
+GG++ +E LK + +PL+ P L GV P GILL+GPPG GKT L +AN +
Sbjct: 247 VGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTSNAH 306
Query: 186 FYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQR-EMERRI 244
I+ +VS G +E +RD+F++A + PSI+FIDEID+IA R N E+E R+
Sbjct: 307 VLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSGEVESRV 366
Query: 245 VTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDREI 304
V L+T MD G G V+VI ATNRP++VDPALRRPGRFD+E+
Sbjct: 367 VATLLTLMD--------GMGAA---------GKVVVIAATNRPNSVDPALRRPGRFDQEV 409
Query: 305 VLGVPDENARVQIL----SVLTRNLRVEGSFDLVKIARSTPGFV 344
+G+PD +AR IL S ++ + V S + IA T G+V
Sbjct: 410 EIGIPDVDARFDILTKQFSRMSSDRHVLDSEAIKYIASKTHGYV 453
Score = 326 (119.8 bits), Expect = 3.7e-26, P = 3.7e-26
Identities = 84/256 (32%), Positives = 126/256 (49%)
Query: 431 VGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGAN 490
VGGLD I + P + FGV G LL+GPPG GKT++ + VAN + A+
Sbjct: 247 VGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTSNAH 306
Query: 491 FIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE-GGWVVERL 549
+ I GP +++KY+GE+E A+R +F+ AR P I+F DE+D++ R + G V R+
Sbjct: 307 VLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSGEVESRV 366
Query: 550 LNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEAL 609
+ LL +DG V VI ATNRP+ +D A+ RPGRF + + + +P D R IL
Sbjct: 367 VATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDILTKQ 426
Query: 610 ARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIK 669
+ D V L + A G + +++ F++K
Sbjct: 427 FSRMSSDRHV-LDSEAIKYIASKTHGYVGADLTALCRESVMKTIQRGLGTDANIDKFSLK 485
Query: 670 LT--HFEQALSKISPS 683
+T E A+ I PS
Sbjct: 486 VTLKDVESAMVDIRPS 501
Score = 249 (92.7 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 55/163 (33%), Positives = 84/163 (51%)
Query: 93 SREVEMKKEESVXXXXXXXXXXXXXXXXPR--FQDLGGMESVLEELKMEVIVPLYHPQLP 150
S +V +K ES P+ + D+GG E + ++K + +PL +
Sbjct: 483 SLKVTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETF 542
Query: 151 QWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVPFYKISATEVVSGVSGASEENIRDLF 210
LG+ G+LLYGPPGC KT A A+A E+G+ F + E+ + G SE IR++F
Sbjct: 543 ARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIF 602
Query: 211 SKAYRTAPSIVFIDEIDAIASKRENLQREMERRIVTQLMTCMD 253
KA APSI+F DEIDA++ R+ ++T L+ +D
Sbjct: 603 RKARSAAPSIIFFDEIDALSPDRDGSSTSAANHVLTSLLNEID 645
Score = 161 (61.7 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 33/67 (49%), Positives = 44/67 (65%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGS-FDLVKI 336
V+++ ATNRPD +D AL RPGR DR I +G PD NAR++IL T+ E S DL ++
Sbjct: 653 VVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLHEL 712
Query: 337 ARSTPGF 343
A T G+
Sbjct: 713 ADRTEGY 719
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 525 (189.9 bits), Expect = 8.2e-83, Sum P(2) = 8.2e-83
Identities = 115/305 (37%), Positives = 172/305 (56%)
Query: 397 LTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
+ +T+ D A ++PS+ RE F +P V W D+GG + L+ + + ++ + ++
Sbjct: 467 IKVTVDDVYHALPEIRPSAMREIFLEMPKVHWSDIGGQEELKRKLIEVVQLPLEASDSFK 526
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
GV G LLYGPPGC KTL AKA+A E+G NF+ +KGPE+ NKYVGESE A+R +F
Sbjct: 527 NLGVSSPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGESERAIREIFR 586
Query: 517 RARTCSPCILFFDEVDALTTKR-GKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRP 575
+AR SP I+FFDE+DA+ R G +L LL E+DG ++ KGV ++GATN+P
Sbjct: 587 KARAASPSIIFFDEIDAIAGDRDGDSSTTAASNVLTSLLNEIDGVEELKGVVIVGATNKP 646
Query: 576 DVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPI---DDSVDLHTIAQSKFCEN 632
+D A+LRPGR + +YV P D R IL+ +RK + D+SVDL +A+ +
Sbjct: 647 TEIDPALLRPGRLDRHIYVAPPDYDARLQILQKCSRKFNLQSGDESVDLQKLAE--LTDG 704
Query: 633 LSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRY 692
SG ++ +K ++ VT HFE AL IS ++ ++ Y
Sbjct: 705 CSGAEVTLLCQEAGLAA----IMENKEATTVTN-----KHFEHALKGISRGITPEMLEYY 755
Query: 693 KTLSE 697
+ S+
Sbjct: 756 EKFSK 760
Score = 346 (126.9 bits), Expect = 2.1e-28, P = 2.1e-28
Identities = 87/225 (38%), Positives = 124/225 (55%)
Query: 123 FQDLGGMESVLEELKMEVI-VPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
+ D+GG E + +L +EV+ +PL + LGV G+LLYGPPGC KT A A+A E
Sbjct: 498 WSDIGGQEELKRKL-IEVVQLPLEASDSFKNLGVSSPKGVLLYGPPGCSKTLTAKALATE 556
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE-NLQREM 240
+G+ F + E+ + G SE IR++F KA +PSI+F DEIDAIA R+ +
Sbjct: 557 SGLNFLAVKGPEIFNKYVGESERAIREIFRKARAASPSIIFFDEIDAIAGDRDGDSSTTA 616
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRF 300
++T L+ +D L G V+++GATN+P +DPAL RPGR
Sbjct: 617 ASNVLTSLLNEIDGVEEL--KG---------------VVIVGATNKPTEIDPALLRPGRL 659
Query: 301 DREIVLGVPDENARVQILSVLTRNLRVEG---SFDLVKIARSTPG 342
DR I + PD +AR+QIL +R ++ S DL K+A T G
Sbjct: 660 DRHIYVAPPDYDARLQILQKCSRKFNLQSGDESVDLQKLAELTDG 704
Score = 328 (120.5 bits), Expect = 8.2e-83, Sum P(2) = 8.2e-83
Identities = 84/227 (37%), Positives = 121/227 (53%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE- 181
+ +GG+ +E LK + +PL +P L G+ P GILL+GPPG GKT L +AN
Sbjct: 228 YDQVGGLSKQIELLKSTIELPLNNPTLFSDFGISPPRGILLHGPPGTGKTMLLRCVANSI 287
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREME 241
T I+ +VS G +E IRD+F++A + PSI+F+DEID+IA R
Sbjct: 288 TEAHVLTINGPSIVSKYLGETENAIRDIFNEAKKFQPSIIFMDEIDSIAPSR-------- 339
Query: 242 RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFD 301
T + ES + Q G ++VIGATNRP+++D ALRRPGRFD
Sbjct: 340 ----TSDDSGETESRVVAQ----LLTVMDGMGDNGRIVVIGATNRPNSIDSALRRPGRFD 391
Query: 302 REIVLGVPDENARVQILSVLTRNLRVEG----SFDLVKIARSTPGFV 344
+E+ +G+PD AR +IL+ + E ++ IA T G+V
Sbjct: 392 QEVEIGIPDVEAREEILTKQFAKMNSEKCQITKEEIASIASKTHGYV 438
Score = 322 (118.4 bits), Expect = 9.8e-26, P = 9.8e-26
Identities = 69/193 (35%), Positives = 110/193 (56%)
Query: 417 REGFSAIPN-VKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCG 475
R + +P + ++ VGGL I + P + +FG+ G LL+GPPG G
Sbjct: 216 RSKYPNLPQQITYDQVGGLSKQIELLKSTIELPLNNPTLFSDFGISPPRGILLHGPPGTG 275
Query: 476 KTLIAKAVANE-AGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDAL 534
KT++ + VAN A+ + I GP +++KY+GE+E A+R +F+ A+ P I+F DE+D++
Sbjct: 276 KTMLLRCVANSITEAHVLTINGPSIVSKYLGETENAIRDIFNEAKKFQPSIIFMDEIDSI 335
Query: 535 TTKR-GKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLY 593
R + G R++ QLL +DG + VIGATNRP+ +D A+ RPGRF + +
Sbjct: 336 APSRTSDDSGETESRVVAQLLTVMDGMGDNGRIVVIGATNRPNSIDSALRRPGRFDQEVE 395
Query: 594 VPLPTPDERGLIL 606
+ +P + R IL
Sbjct: 396 IGIPDVEAREEIL 408
>WB|WBGene00003119 [details] [associations]
symbol:mac-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
junction helicase activity" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006629 "lipid metabolic process" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0019915 "lipid
storage" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0040007 GO:GO:0002119 GO:GO:0006629
GO:GO:0000003 GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AL117203 PIR:T31591
RefSeq:NP_496814.1 ProteinModelPortal:Q9NAG4 SMR:Q9NAG4
IntAct:Q9NAG4 STRING:Q9NAG4 PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7
GeneID:174974 KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974
WormBase:Y48C3A.7 InParanoid:Q9NAG4 NextBio:886252
ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
Length = 813
Score = 816 (292.3 bits), Expect = 2.5e-81, P = 2.5e-81
Identities = 181/440 (41%), Positives = 257/440 (58%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
VLVIG T+RPDAVD LRR GRF+ EI LG+PDE AR +IL + + + + G L +IA
Sbjct: 371 VLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDETAREKILEKICK-VNLAGDVTLKQIA 429
Query: 338 RSTPGFVXXXXXXXXXXXXXXXMKRIIDQR--KSELSGNSIAEQHSDDWWRQ-PWL---- 390
+ TPG+V + R+ D K+E N EQ ++ R WL
Sbjct: 430 KLTPGYVGADLQALIREAAKVAIDRVFDTIVVKNEGHKNLTVEQIKEELDRVLAWLQGDD 489
Query: 391 -PEEMERLT----ITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYI 445
P + L I+ DFE A +QP+++REGF+ +P+V W+D+G L +R + + I
Sbjct: 490 DPSALSELNGGLQISFEDFERALSTIQPAAKREGFATVPDVSWDDIGALVEVRKQLEWSI 549
Query: 446 VRRIKFPEEYEEFGVDLET-GFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYV 504
+ IK +++ G+D G LL GPPGCGKTL+AKAVANE G NFI +KGPELLN YV
Sbjct: 550 LYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAKAVANETGMNFISVKGPELLNMYV 609
Query: 505 GESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKEGGWVVERLLNQLLIELDGADK 562
GESE AVRT+F RAR PC++FFDE+DAL KR G+ G RL+NQLL E+DG +
Sbjct: 610 GESERAVRTVFQRARDSQPCVIFFDEIDALVPKRSHGESSGGA--RLVNQLLTEMDGVEG 667
Query: 563 RKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARK--KP-IDDSV 619
R+ VF+IGATNRPD++D A+LRPGR K+L+V P+ ++R IL + +P + + +
Sbjct: 668 RQKVFLIGATNRPDIVDAAILRPGRLDKILFVDFPSVEDRVDILRKSTKNGTRPMLGEDI 727
Query: 620 DLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSK 679
D H IAQ +G +++ + S + + HF +A S+
Sbjct: 728 DFHEIAQLPELAGFTGADLAALIHESSLLALQARVLENDESVK----GVGMRHFREAASR 783
Query: 680 ISPSVSELQIQRYKTLSETF 699
I PSV+E ++Y+ + + +
Sbjct: 784 IRPSVTEADRKKYEHMKKIY 803
Score = 459 (166.6 bits), Expect = 9.6e-43, P = 9.6e-43
Identities = 111/284 (39%), Positives = 156/284 (54%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
+F+ +GG + E+ + + L P+ LGV P G +++GPPGCGKT A A+A E
Sbjct: 204 KFEHIGGADRQFLEV-CRLAMHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVAGE 262
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREME 241
+P +++ATE+VSGVSG +EE IR LF A + +P I+ +D+IDAIA +RE QREME
Sbjct: 263 LAIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSPCILILDDIDAIAPRRETAQREME 322
Query: 242 RRIVTQLMTCMDE----------SHRLV--QPGXXXXXXXXXXXXPGYVLVIGATNRPDA 289
RR+V+QL + +DE +L G VLVIG T+RPDA
Sbjct: 323 RRVVSQLCSSLDELVLPPREKPLKDQLTFGDDGSVAIIGDSPTAAGAGVLVIGTTSRPDA 382
Query: 290 VDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXX 349
VD LRR GRF+ EI LG+PDE AR +IL + + + + G L +IA+ TPG+V
Sbjct: 383 VDGGLRRAGRFENEISLGIPDETAREKILEKICK-VNLAGDVTLKQIAKLTPGYVGADLQ 441
Query: 350 XXXXXXXXXXMKRIIDQR--KSELSGNSIAEQHSDDWWRQ-PWL 390
+ R+ D K+E N EQ ++ R WL
Sbjct: 442 ALIREAAKVAIDRVFDTIVVKNEGHKNLTVEQIKEELDRVLAWL 485
Score = 248 (92.4 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 53/133 (39%), Positives = 80/133 (60%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGV--RPMAGILLYGPPGCGKTKLAHAIAN 180
+ D+G + V ++L+ ++ P+ LG+ RP GILL GPPGCGKT LA A+AN
Sbjct: 532 WDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQ-GILLCGPPGCGKTLLAKAVAN 590
Query: 181 ETGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREM 240
ETG+ F + E+++ G SE +R +F +A + P ++F DEIDA+ KR + +
Sbjct: 591 ETGMNFISVKGPELLNMYVGESERAVRTVFQRARDSQPCVIFFDEIDALVPKRSHGESSG 650
Query: 241 ERRIVTQLMTCMD 253
R+V QL+T MD
Sbjct: 651 GARLVNQLLTEMD 663
Score = 242 (90.2 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 51/134 (38%), Positives = 78/134 (58%)
Query: 425 NVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVA 484
+VK+E +GG D E R + +K P+ + GVD GF+++GPPGCGKT+ A+AVA
Sbjct: 202 HVKFEHIGGADRQFLEVCR-LAMHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVA 260
Query: 485 NEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGW 544
E + + EL++ GE+E +R LF A+ SPCIL D++DA+ +R
Sbjct: 261 GELAIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSPCILILDDIDAIAPRRETAQRE 320
Query: 545 VVERLLNQLLIELD 558
+ R+++QL LD
Sbjct: 321 MERRVVSQLCSSLD 334
Score = 93 (37.8 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 565 GVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTI 624
GV VIG T+RPD +D + R GRF + + +P R ILE + + D V L I
Sbjct: 370 GVLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDETAREKILEKICKVNLAGD-VTLKQI 428
Query: 625 AQ 626
A+
Sbjct: 429 AK 430
>UNIPROTKB|Q9NAG4 [details] [associations]
symbol:mac-1 "Protein MAC-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0040007 GO:GO:0002119 GO:GO:0006629 GO:GO:0000003
GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
GO:GO:0017111 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AL117203 PIR:T31591 RefSeq:NP_496814.1
ProteinModelPortal:Q9NAG4 SMR:Q9NAG4 IntAct:Q9NAG4 STRING:Q9NAG4
PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7 GeneID:174974
KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974 WormBase:Y48C3A.7
InParanoid:Q9NAG4 NextBio:886252 ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
Length = 813
Score = 816 (292.3 bits), Expect = 2.5e-81, P = 2.5e-81
Identities = 181/440 (41%), Positives = 257/440 (58%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
VLVIG T+RPDAVD LRR GRF+ EI LG+PDE AR +IL + + + + G L +IA
Sbjct: 371 VLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDETAREKILEKICK-VNLAGDVTLKQIA 429
Query: 338 RSTPGFVXXXXXXXXXXXXXXXMKRIIDQR--KSELSGNSIAEQHSDDWWRQ-PWL---- 390
+ TPG+V + R+ D K+E N EQ ++ R WL
Sbjct: 430 KLTPGYVGADLQALIREAAKVAIDRVFDTIVVKNEGHKNLTVEQIKEELDRVLAWLQGDD 489
Query: 391 -PEEMERLT----ITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYI 445
P + L I+ DFE A +QP+++REGF+ +P+V W+D+G L +R + + I
Sbjct: 490 DPSALSELNGGLQISFEDFERALSTIQPAAKREGFATVPDVSWDDIGALVEVRKQLEWSI 549
Query: 446 VRRIKFPEEYEEFGVDLET-GFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYV 504
+ IK +++ G+D G LL GPPGCGKTL+AKAVANE G NFI +KGPELLN YV
Sbjct: 550 LYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAKAVANETGMNFISVKGPELLNMYV 609
Query: 505 GESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKEGGWVVERLLNQLLIELDGADK 562
GESE AVRT+F RAR PC++FFDE+DAL KR G+ G RL+NQLL E+DG +
Sbjct: 610 GESERAVRTVFQRARDSQPCVIFFDEIDALVPKRSHGESSGGA--RLVNQLLTEMDGVEG 667
Query: 563 RKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARK--KP-IDDSV 619
R+ VF+IGATNRPD++D A+LRPGR K+L+V P+ ++R IL + +P + + +
Sbjct: 668 RQKVFLIGATNRPDIVDAAILRPGRLDKILFVDFPSVEDRVDILRKSTKNGTRPMLGEDI 727
Query: 620 DLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSK 679
D H IAQ +G +++ + S + + HF +A S+
Sbjct: 728 DFHEIAQLPELAGFTGADLAALIHESSLLALQARVLENDESVK----GVGMRHFREAASR 783
Query: 680 ISPSVSELQIQRYKTLSETF 699
I PSV+E ++Y+ + + +
Sbjct: 784 IRPSVTEADRKKYEHMKKIY 803
Score = 459 (166.6 bits), Expect = 9.6e-43, P = 9.6e-43
Identities = 111/284 (39%), Positives = 156/284 (54%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
+F+ +GG + E+ + + L P+ LGV P G +++GPPGCGKT A A+A E
Sbjct: 204 KFEHIGGADRQFLEV-CRLAMHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVAGE 262
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREME 241
+P +++ATE+VSGVSG +EE IR LF A + +P I+ +D+IDAIA +RE QREME
Sbjct: 263 LAIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSPCILILDDIDAIAPRRETAQREME 322
Query: 242 RRIVTQLMTCMDE----------SHRLV--QPGXXXXXXXXXXXXPGYVLVIGATNRPDA 289
RR+V+QL + +DE +L G VLVIG T+RPDA
Sbjct: 323 RRVVSQLCSSLDELVLPPREKPLKDQLTFGDDGSVAIIGDSPTAAGAGVLVIGTTSRPDA 382
Query: 290 VDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXX 349
VD LRR GRF+ EI LG+PDE AR +IL + + + + G L +IA+ TPG+V
Sbjct: 383 VDGGLRRAGRFENEISLGIPDETAREKILEKICK-VNLAGDVTLKQIAKLTPGYVGADLQ 441
Query: 350 XXXXXXXXXXMKRIIDQR--KSELSGNSIAEQHSDDWWRQ-PWL 390
+ R+ D K+E N EQ ++ R WL
Sbjct: 442 ALIREAAKVAIDRVFDTIVVKNEGHKNLTVEQIKEELDRVLAWL 485
Score = 248 (92.4 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 53/133 (39%), Positives = 80/133 (60%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGV--RPMAGILLYGPPGCGKTKLAHAIAN 180
+ D+G + V ++L+ ++ P+ LG+ RP GILL GPPGCGKT LA A+AN
Sbjct: 532 WDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQ-GILLCGPPGCGKTLLAKAVAN 590
Query: 181 ETGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREM 240
ETG+ F + E+++ G SE +R +F +A + P ++F DEIDA+ KR + +
Sbjct: 591 ETGMNFISVKGPELLNMYVGESERAVRTVFQRARDSQPCVIFFDEIDALVPKRSHGESSG 650
Query: 241 ERRIVTQLMTCMD 253
R+V QL+T MD
Sbjct: 651 GARLVNQLLTEMD 663
Score = 242 (90.2 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 51/134 (38%), Positives = 78/134 (58%)
Query: 425 NVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVA 484
+VK+E +GG D E R + +K P+ + GVD GF+++GPPGCGKT+ A+AVA
Sbjct: 202 HVKFEHIGGADRQFLEVCR-LAMHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVA 260
Query: 485 NEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGW 544
E + + EL++ GE+E +R LF A+ SPCIL D++DA+ +R
Sbjct: 261 GELAIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSPCILILDDIDAIAPRRETAQRE 320
Query: 545 VVERLLNQLLIELD 558
+ R+++QL LD
Sbjct: 321 MERRVVSQLCSSLD 334
Score = 93 (37.8 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 565 GVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTI 624
GV VIG T+RPD +D + R GRF + + +P R ILE + + D V L I
Sbjct: 370 GVLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDETAREKILEKICKVNLAGD-VTLKQI 428
Query: 625 AQ 626
A+
Sbjct: 429 AK 430
>TAIR|locus:2044209 [details] [associations]
symbol:CDC48B "cell division cycle 48B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
GermOnline:AT2G03670 Uniprot:Q9ZPR1
Length = 603
Score = 481 (174.4 bits), Expect = 1.7e-80, Sum P(2) = 1.7e-80
Identities = 114/310 (36%), Positives = 164/310 (52%)
Query: 395 ERLTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEE 454
+ L +T DF+ A +V PS R IP V W+DVGGL L+ + + + IK
Sbjct: 252 DSLILTSQDFKIAKSVVGPSINRGITVEIPKVTWDDVGGLKDLKKKLQQAVEWPIKHSAA 311
Query: 455 YEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTL 514
+ + G+ G LL+GPPGC KT +AKA AN A A+F + EL + YVGE E +R
Sbjct: 312 FVKMGISPMRGILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNT 371
Query: 515 FSRARTCSPCILFFDEVDALTTKRGKEGG----WVVERLLNQLLIELDGADKRKGVFVIG 570
F RAR SP I+FFDE D + KRG E V ERLL+ LL E+DG ++ KG+ V+
Sbjct: 372 FQRARLASPSIIFFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKGILVLA 431
Query: 571 ATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFC 630
ATNRP +D A++RPGRF +LYVP P + R IL+ R + D VDL IA+
Sbjct: 432 ATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDLRKIAEET-- 489
Query: 631 ENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQ 690
+ +G +S + + T + HF+ A S + P+++ +++
Sbjct: 490 DLFTGAELEGLCRESGT-------VSLRENIAAT--AVFNRHFQTAKSSLKPALTIEEVE 540
Query: 691 RYKTLSETFK 700
Y + + K
Sbjct: 541 TYSSFRKAAK 550
Score = 346 (126.9 bits), Expect = 1.7e-80, Sum P(2) = 1.7e-80
Identities = 87/245 (35%), Positives = 130/245 (53%)
Query: 125 DLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGV 184
++GG E L+ L+ +I P +P + LG++ G+LLYGPPG GKT L A+ E
Sbjct: 23 EIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDA 82
Query: 185 PFYKISATEVVSGVSGASEENIRDLFSKAYRTA----PSIVFIDEIDAIASKRENLQREM 240
+S V +G SE+ +R+ F++A A PS++FIDEID + +R+ +RE
Sbjct: 83 HLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRRD-ARREQ 141
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRF 300
+ RI +QL T MD + +P P V+V+ +TNR DA+DPALRR GRF
Sbjct: 142 DVRIASQLFTLMDSN----KPSSSA---------PR-VVVVASTNRVDAIDPALRRAGRF 187
Query: 301 DREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXXM 360
D + + P+E R++IL + T+ + ++ S DL IA S G+V
Sbjct: 188 DALVEVSTPNEEDRLKILQLYTKKVNLDPSVDLQAIAISCNGYVGADLEALCREATISAS 247
Query: 361 KRIID 365
KR D
Sbjct: 248 KRSSD 252
Score = 341 (125.1 bits), Expect = 3.4e-28, P = 3.4e-28
Identities = 84/222 (37%), Positives = 119/222 (53%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG++ + ++L+ V P+ H +G+ PM GILL+GPPGC KT LA A AN
Sbjct: 285 WDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAANAA 344
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F+ +S E+ S G E +R+ F +A +PSI+F DE D +A KR +
Sbjct: 345 QASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEADVVACKRGDESSSNSS 404
Query: 243 RIVTQLM-TCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFD 301
+ +L+ T + E L + G +LV+ ATNRP A+D AL RPGRFD
Sbjct: 405 TVGERLLSTLLTEMDGLEE-------------AKG-ILVLAATNRPYAIDAALMRPGRFD 450
Query: 302 REIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
+ + PD AR +IL V TRN+ + DL KIA T F
Sbjct: 451 LVLYVPPPDLEARFEILQVHTRNMTLGDDVDLRKIAEETDLF 492
Score = 282 (104.3 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 84/271 (30%), Positives = 126/271 (46%)
Query: 425 NVKWE---DVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAK 481
N KW ++GG + I+ ++P E G+ G LLYGPPG GKT + +
Sbjct: 15 NEKWRAEAEIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVR 74
Query: 482 AVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCS----PCILFFDEVDALTTK 537
AV E A+ I + + + GESE +R F+ A + + P ++F DE+D L +
Sbjct: 75 AVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPR 134
Query: 538 RGKEGGWVVERLLNQLLIELDG---ADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYV 594
R V R+ +QL +D + V V+ +TNR D +D A+ R GRF L+ V
Sbjct: 135 RDARREQDV-RIASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEV 193
Query: 595 PLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKL 654
P ++R IL+ +K +D SVDL IA S C G +
Sbjct: 194 STPNEEDRLKILQLYTKKVNLDPSVDLQAIAIS--CNGYVGADLEALCREAT-------I 244
Query: 655 ISSKSSSDVTPFTIKLTHFEQALSKISPSVS 685
+SK SSD T + F+ A S + PS++
Sbjct: 245 SASKRSSDSLILTSQ--DFKIAKSVVGPSIN 273
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 770 (276.1 bits), Expect = 1.9e-76, P = 1.9e-76
Identities = 167/440 (37%), Positives = 248/440 (56%)
Query: 277 YVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKI 336
+V+V+ ATNRP+++DPALRR GRFDRE+ +G+PD R++IL + T+N+++ DL ++
Sbjct: 344 HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQV 403
Query: 337 ARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMER 396
A T G V +++ +D +L +I D E M
Sbjct: 404 ANETHGHVGADLAALCSEAALQAIRKKMDL--IDLEDETI------D-------AEVMNS 448
Query: 397 LTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
L +TM DF A PS+ RE +P V WED+GGL+ ++ E + ++ P+++
Sbjct: 449 LAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFL 508
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
+FG+ G L YGPPGCGKTL+AKA+ANE ANFI IKGPELL + GESE VR +F
Sbjct: 509 KFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFD 568
Query: 517 RARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
+AR +PC+LFFDE+D++ RG +GG +R++NQ+L E+DG +K VF+IGATN
Sbjct: 569 KARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATN 628
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ------- 626
RPD++D A+LRPGR +L+Y+PLP R IL+A RK P+ VDL +A+
Sbjct: 629 RPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSG 688
Query: 627 ---SKFCENLSGXXXXXXXXXXXXXXXXXKLISSK---SSSDVTPFTIKLTHFEQALSKI 680
++ C+ + S D P I+ HFE+A+
Sbjct: 689 ADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVP-EIRRDHFEEAMRFA 747
Query: 681 SPSVSELQIQRYKTLSETFK 700
SVS+ I++Y+ ++T +
Sbjct: 748 RRSVSDNDIRKYEMFAQTLQ 767
Score = 467 (169.5 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 108/273 (39%), Positives = 157/273 (57%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG L ++K V +PL HP L + +GV+P GILLYGPPG GKT +A A+ANET
Sbjct: 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASK----RENLQR 238
G F+ I+ E++S ++G SE N+R F + + AP+I+FIDE+DAIAS
Sbjct: 263 GAFFFLINGPEIMSKLAGESESNLRKAFEETEKNAPAIIFIDELDAIASDDCFPSPQTHG 322
Query: 239 EMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPG 298
E+ERRIV+QL+T MD L Q +V+V+ ATNRP+++DPALRR G
Sbjct: 323 EVERRIVSQLLTLMDG---LKQRA--------------HVIVMAATNRPNSIDPALRRFG 365
Query: 299 RFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXX 358
RFDRE+ +G+PD R++IL + T+N+++ DL ++A T G V
Sbjct: 366 RFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQ 425
Query: 359 XMKR---IIDQRKSELSG---NSIAEQHSDDWW 385
+++ +ID + NS+A D W
Sbjct: 426 AIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRW 458
Score = 381 (139.2 bits), Expect = 2.7e-32, P = 2.7e-32
Identities = 107/312 (34%), Positives = 152/312 (48%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++D+GG+E V EL+ V P+ HP G+ P G+L YGPPGCGKT LA AIANE
Sbjct: 480 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 539
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE-NLQRE-- 239
F I E+++ G SE N+R++F KA + AP ++F DE+D+IA R N+
Sbjct: 540 QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGG 599
Query: 240 MERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
R++ Q++T MD G V +IGATNRPD +DPA+ RPGR
Sbjct: 600 AADRVINQILTEMD--------GMSTKKN---------VFIIGATNRPDIIDPAILRPGR 642
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXX 359
D+ I + +PDE +RV IL R V DL +A+ T GF
Sbjct: 643 LDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLA 702
Query: 360 MKRIID---QRKSELSGN-SIAEQHSDD---WWRQPWLPEEME--RLTITMTDFEEATKM 410
++ I+ +R+ E N S E DD R+ E M R +++ D +
Sbjct: 703 IRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMF 762
Query: 411 VQPSSRREGFSA 422
Q + GF +
Sbjct: 763 AQTLQQSRGFGS 774
Score = 352 (129.0 bits), Expect = 5.0e-29, P = 5.0e-29
Identities = 80/218 (36%), Positives = 121/218 (55%)
Query: 412 QPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGP 471
+P R + ++ V ++D+GG + + ++ P ++ GV G LLYGP
Sbjct: 187 EPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGP 246
Query: 472 PGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEV 531
PG GKTLIA+AVANE GA F I GPE+++K GESE +R F +P I+F DE+
Sbjct: 247 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEETEKNAPAIIFIDEL 306
Query: 532 DALTTK----RGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGR 587
DA+ + + G V R+++QLL +DG +R V V+ ATNRP+ +D A+ R GR
Sbjct: 307 DAIASDDCFPSPQTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGR 366
Query: 588 FGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
F + + + +P R IL+ + + D VDL +A
Sbjct: 367 FDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVA 404
>UNIPROTKB|A7YSY2 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 eggNOG:COG0464 HOGENOM:HOG000223225
GeneTree:ENSGT00700000104502 GO:GO:0017111 HOVERGEN:HBG001226
EMBL:BC114696 IPI:IPI00693499 RefSeq:NP_001099095.1
UniGene:Bt.21280 ProteinModelPortal:A7YSY2 PRIDE:A7YSY2
Ensembl:ENSBTAT00000024327 GeneID:533070 KEGG:bta:533070 CTD:79029
InParanoid:A7YSY2 OMA:TWEQIGG OrthoDB:EOG42RD70 NextBio:20875900
Uniprot:A7YSY2
Length = 767
Score = 382 (139.5 bits), Expect = 6.9e-74, Sum P(3) = 6.9e-74
Identities = 86/222 (38%), Positives = 126/222 (56%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVP 185
LGG+ + L+ + +PL +P+ LG+ G+LL GPPG GKT+L A+A ETG
Sbjct: 202 LGGLSEAADSLRELLRLPLRYPRALASLGLEVPRGVLLAGPPGVGKTQLVRAVARETGAE 261
Query: 186 FYKISATEVVSGVSGASEENIRDLFSKAYRTA---PSIVFIDEIDAIASKRENLQREMER 242
+SA + G +EEN+R +F +A A P+++F+DE+DA+ +R + E
Sbjct: 262 LLAVSAPALQGARPGETEENVRRIFKRARELASRRPTLLFLDEVDALCPRRGGPHQAPES 321
Query: 243 RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDR 302
R+V Q++T +D G V+V+G+TNRPDA+DPALRRPGRFDR
Sbjct: 322 RVVAQVLTLLD--------GIGEDRE---------VVVVGSTNRPDALDPALRRPGRFDR 364
Query: 303 EIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFV 344
E+V+G P R IL V+T + + G DL +A T G+V
Sbjct: 365 EVVIGTPTLRQRKAILQVITSKMPISGQVDLNLLAEMTVGYV 406
Score = 357 (130.7 bits), Expect = 1.2e-29, P = 1.2e-29
Identities = 89/256 (34%), Positives = 130/256 (50%)
Query: 431 VGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGAN 490
+GGL + +++P G+++ G LL GPPG GKT + +AVA E GA
Sbjct: 202 LGGLSEAADSLRELLRLPLRYPRALASLGLEVPRGVLLAGPPGVGKTQLVRAVARETGAE 261
Query: 491 FIHIKGPELLNKYVGESELAVRTLFSRARTCS---PCILFFDEVDALTTKRGKEGGWVVE 547
+ + P L GE+E VR +F RAR + P +LF DEVDAL +RG
Sbjct: 262 LLAVSAPALQGARPGETEENVRRIFKRARELASRRPTLLFLDEVDALCPRRGGPHQAPES 321
Query: 548 RLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILE 607
R++ Q+L LDG + + V V+G+TNRPD +D A+ RPGRF + + + PT +R IL+
Sbjct: 322 RVVAQVLTLLDGIGEDREVVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLRQRKAILQ 381
Query: 608 ALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFT 667
+ K PI VDL+ +A+ ++ L+ S+ + D P T
Sbjct: 382 VITSKMPISGQVDLNLLAE------MTVGYVGADLTALCREAAMQALLHSEKNQD-NP-T 433
Query: 668 IKLTHFEQALSKISPS 683
I T F +A KI PS
Sbjct: 434 IDETDFLEAFKKIQPS 449
Score = 306 (112.8 bits), Expect = 4.0e-23, Sum P(2) = 4.0e-23
Identities = 77/234 (32%), Positives = 117/234 (50%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++ +GG+E V +LK + PL P+ +G+ G+LLYGPPGC KT L A+A
Sbjct: 465 WEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSC 524
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQRE--M 240
F +S ++ S G SE+ + +F +A P+IVF+DEID+I R + E +
Sbjct: 525 RCSFVSVSGADLFSPFVGDSEKILSQVFRQARANTPAIVFLDEIDSILGSRSISRTECNV 584
Query: 241 ERRIVTQLMTCMD--------------ESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNR 286
+ R+++ L+ +D + H + V+V+ ATNR
Sbjct: 585 QDRVLSVLLNELDGVGLKTIERRGSKSDQHGKCKQLEKNEELEFQEIFNSNVIVVAATNR 644
Query: 287 PDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARST 340
PD +D AL RPGR D+ I + PDE R+ IL V T+N + L K+A T
Sbjct: 645 PDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNTPMGPDVSLEKVAAET 698
Score = 305 (112.4 bits), Expect = 6.9e-74, Sum P(3) = 6.9e-74
Identities = 66/166 (39%), Positives = 99/166 (59%)
Query: 398 TITMTDFEEATKMVQPSSRRE--GFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEY 455
TI TDF EA K +QPSS R G + I V WE +GGL+ ++ + + I +KFP E+
Sbjct: 433 TIDETDFLEAFKKIQPSSFRSVIGVTDIKPVGWEQIGGLEDVKLKLKQSIEWPLKFPREF 492
Query: 456 EEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLF 515
G+ G LLYGPPGC KT + +A+A +F+ + G +L + +VG+SE + +F
Sbjct: 493 VRMGLTQPKGVLLYGPPGCAKTTLVRALATSCRCSFVSVSGADLFSPFVGDSEKILSQVF 552
Query: 516 SRARTCSPCILFFDEVDALTTKRG--KEGGWVVERLLNQLLIELDG 559
+AR +P I+F DE+D++ R + V +R+L+ LL ELDG
Sbjct: 553 RQARANTPAIVFLDEIDSILGSRSISRTECNVQDRVLSVLLNELDG 598
Score = 171 (65.3 bits), Expect = 6.9e-74, Sum P(3) = 6.9e-74
Identities = 47/132 (35%), Positives = 69/132 (52%)
Query: 566 VFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGL--ILEALARKKPIDDSVDLHT 623
V V+ ATNRPDV+D A+LRPGR K++Y+P P PDE+G IL+ + P+ V L
Sbjct: 636 VIVVAATNRPDVLDDALLRPGRLDKIIYIP-P-PDEKGRLSILKVCTKNTPMGPDVSLEK 693
Query: 624 IAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPS 683
+A ++ C SG L ++ +VT T+K HF ++L + PS
Sbjct: 694 VA-AETCF-FSGADLGNLCKEAAL------LALQENGLEVT--TVKQEHFLESLKTVKPS 743
Query: 684 VSELQIQRYKTL 695
+S + YK L
Sbjct: 744 LSHKDLTLYKNL 755
Score = 38 (18.4 bits), Expect = 5.4e-32, Sum P(2) = 5.4e-32
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 394 MERLTITMTDFEEATKMVQPSSRREGFSAIPNV 426
+E T+ F E+ K V+PS + + N+
Sbjct: 723 LEVTTVKQEHFLESLKTVKPSLSHKDLTLYKNL 755
>UNIPROTKB|F1NG80 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:AADN02041604 IPI:IPI00596203 Ensembl:ENSGALT00000009112
Uniprot:F1NG80
Length = 748
Score = 397 (144.8 bits), Expect = 3.0e-34, P = 3.0e-34
Identities = 95/256 (37%), Positives = 132/256 (51%)
Query: 431 VGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGAN 490
V GLD + + +FP +++ G+ + G LL GPPG GKTL+ KAVA EAGA
Sbjct: 199 VAGLDDVGESLKEMVDLPFRFPRTFKKLGLSVPNGVLLVGPPGVGKTLLVKAVAREAGAY 258
Query: 491 FIHIKGPELLNKYVGESELAVRTLFSRAR--TCS-PCILFFDEVDALTTKRGKEGGWVVE 547
+ I GP L GESE +R++F + R +C P +LF DE+DAL KRG +
Sbjct: 259 LLCISGPALYGSRPGESEENLRSVFEKGREMSCEGPTVLFIDEIDALCPKRGSSNSAPED 318
Query: 548 RLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILE 607
RL+ QLL LDG ++ + V+ ATNRPD +D A+ RPGRF + + + PT +R IL+
Sbjct: 319 RLVAQLLTLLDGVGRKDRMVVVAATNRPDALDPALRRPGRFDREVIIGTPTLTQRRSILQ 378
Query: 608 ALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFT 667
L PI +DL K E +G SS S++V
Sbjct: 379 MLTCSMPISTDIDL-----VKLAEMTTGYVGADLTALCREAAMQAVFHSSLDSAEVL--- 430
Query: 668 IKLTHFEQALSKISPS 683
I + F++A KI PS
Sbjct: 431 INMADFQEAFKKIQPS 446
Score = 372 (136.0 bits), Expect = 1.7e-72, Sum P(3) = 1.7e-72
Identities = 89/222 (40%), Positives = 124/222 (55%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVP 185
+ G++ V E LK V +P P+ + LG+ G+LL GPPG GKT L A+A E G
Sbjct: 199 VAGLDDVGESLKEMVDLPFRFPRTFKKLGLSVPNGVLLVGPPGVGKTLLVKAVAREAGAY 258
Query: 186 FYKISATEVVSGVSGASEENIRDLFSKAYRTA---PSIVFIDEIDAIASKRENLQREMER 242
IS + G SEEN+R +F K + P+++FIDEIDA+ KR + E
Sbjct: 259 LLCISGPALYGSRPGESEENLRSVFEKGREMSCEGPTVLFIDEIDALCPKRGSSNSAPED 318
Query: 243 RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDR 302
R+V QL+T +D R + ++V+ ATNRPDA+DPALRRPGRFDR
Sbjct: 319 RLVAQLLTLLDGVGRKDR-----------------MVVVAATNRPDALDPALRRPGRFDR 361
Query: 303 EIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFV 344
E+++G P R IL +LT ++ + DLVK+A T G+V
Sbjct: 362 EVIIGTPTLTQRRSILQMLTCSMPISTDIDLVKLAEMTTGYV 403
Score = 315 (115.9 bits), Expect = 1.7e-72, Sum P(3) = 1.7e-72
Identities = 66/165 (40%), Positives = 96/165 (58%)
Query: 399 ITMTDFEEATKMVQPSSRRE--GFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
I M DF+EA K +QPSS R G + WE +GGL+ ++ + + + +K P+ +
Sbjct: 431 INMADFQEAFKKIQPSSFRSAIGLKECKPITWEQIGGLEDVKLKLKQSVEWPMKLPQAFA 490
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
G+ G LLYGP GC KT + KAVA +F+ + G EL + YVG+SE + +F
Sbjct: 491 RMGLARPKGVLLYGPSGCAKTTLVKAVATSCHCSFLSVSGAELFSPYVGDSEKILSQVFR 550
Query: 517 RARTCSPCILFFDEVDALTTKRG--KEGGWVVERLLNQLLIELDG 559
+AR +P I+F DE+D++ R K G V ER+L+ LL ELDG
Sbjct: 551 QARANTPAIIFLDEIDSILGSRSHSKSGHGVSERVLSVLLNELDG 595
Score = 297 (109.6 bits), Expect = 5.5e-23, P = 5.5e-23
Identities = 74/226 (32%), Positives = 112/226 (49%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++ +GG+E V +LK V P+ PQ +G+ G+LLYGP GC KT L A+A
Sbjct: 462 WEQIGGLEDVKLKLKQSVEWPMKLPQAFARMGLARPKGVLLYGPSGCAKTTLVKAVATSC 521
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQ--REM 240
F +S E+ S G SE+ + +F +A P+I+F+DEID+I R + + +
Sbjct: 522 HCSFLSVSGAELFSPYVGDSEKILSQVFRQARANTPAIIFLDEIDSILGSRSHSKSGHGV 581
Query: 241 ERRIVTQLMTCMDESHRLV---QPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRP 297
R+++ L+ +D V + +V+ ATNRPD +D AL RP
Sbjct: 582 SERVLSVLLNELDGVGLKVTERRGNKLQLELEFQETLSRDFMVVAATNRPDMLDDALLRP 641
Query: 298 GRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
GR DR I + PD R+ IL + T + ++ L IA T F
Sbjct: 642 GRLDRVIYIPPPDLKGRLSILKICTEKIPLDTDVSLQDIAARTDLF 687
Score = 159 (61.0 bits), Expect = 1.7e-72, Sum P(3) = 1.7e-72
Identities = 47/152 (30%), Positives = 74/152 (48%)
Query: 545 VVERLLNQLLIELDGADKRKGVF-VIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERG 603
V ER N+L +EL+ + F V+ ATNRPD++D A+LRPGR +++Y+P P R
Sbjct: 600 VTERRGNKLQLELEFQETLSRDFMVVAATNRPDMLDDALLRPGRLDRVIYIPPPDLKGRL 659
Query: 604 LILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDV 663
IL+ K P+D V L IA + SG L ++ +
Sbjct: 660 SILKICTEKIPLDTDVSLQDIAART--DLFSGADIENLCKEAAL------LALQENGLEA 711
Query: 664 TPFTIKLTHFEQALSKISPSVSELQIQRYKTL 695
T +K HF ++L + PS+S ++ Y+ +
Sbjct: 712 T--AVKHGHFVKSLQTVKPSLSMKDLEFYEKI 741
>RGD|1595990 [details] [associations]
symbol:Spata5l1 "spermatogenesis associated 5-like 1"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1595990 GO:GO:0005524 GeneTree:ENSGT00700000104502
GO:GO:0017111 EMBL:CH473949 CTD:79029 OrthoDB:EOG42RD70
IPI:IPI00357915 RefSeq:NP_001103117.1 UniGene:Rn.151898
Ensembl:ENSRNOT00000043414 GeneID:691729 KEGG:rno:691729
UCSC:RGD:1595990 NextBio:743659 Uniprot:D4A2B7
Length = 747
Score = 381 (139.2 bits), Expect = 2.1e-72, Sum P(3) = 2.1e-72
Identities = 87/222 (39%), Positives = 124/222 (55%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVP 185
LGG+ + L+ + +PL +P LG+ G+LL GPPG GKT+L A+A E G
Sbjct: 195 LGGLSETADSLRELLRLPLCYPLALAALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 254
Query: 186 FYKISATEVVSGVSGASEENIRDLFSKAYRTA---PSIVFIDEIDAIASKRENLQREMER 242
+SA + G +EEN+R +F +A A PS++F+DE+DA+ +R QR E
Sbjct: 255 LLAVSAPALQGTRPGETEENVRRVFQRAQELASRGPSLLFLDEVDALCPRRGGPQRAPES 314
Query: 243 RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDR 302
R+V Q++T +D H G V+V+GATNRPD +DPALRRPGRFDR
Sbjct: 315 RVVAQVLTLLDGIH-----GDRE------------VVVVGATNRPDELDPALRRPGRFDR 357
Query: 303 EIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFV 344
E+++G P R IL V+T + + DL +A T G+V
Sbjct: 358 EVIIGTPTLKQREAILGVITSKMPISSHIDLGLLAEMTVGYV 399
Score = 326 (119.8 bits), Expect = 3.3e-26, P = 3.3e-26
Identities = 88/256 (34%), Positives = 125/256 (48%)
Query: 431 VGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGAN 490
+GGL + + +P G+ + G LL GPPG GKT + +AVA EAGA
Sbjct: 195 LGGLSETADSLRELLRLPLCYPLALAALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 254
Query: 491 FIHIKGPELLNKYVGESELAVRTLFSRARTCS---PCILFFDEVDALTTKRGKEGGWVVE 547
+ + P L GE+E VR +F RA+ + P +LF DEVDAL +RG
Sbjct: 255 LLAVSAPALQGTRPGETEENVRRVFQRAQELASRGPSLLFLDEVDALCPRRGGPQRAPES 314
Query: 548 RLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILE 607
R++ Q+L LDG + V V+GATNRPD +D A+ RPGRF + + + PT +R IL
Sbjct: 315 RVVAQVLTLLDGIHGDREVVVVGATNRPDELDPALRRPGRFDREVIIGTPTLKQREAILG 374
Query: 608 ALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFT 667
+ K PI +DL +A E G L + K+ ++ P
Sbjct: 375 VITSKMPISSHIDLGLLA-----EMTVGYVGADLTALCREAATCALLKNEKNQNN--P-K 426
Query: 668 IKLTHFEQALSKISPS 683
I+ T F +A K+ PS
Sbjct: 427 IEETDFLEAFKKVQPS 442
Score = 312 (114.9 bits), Expect = 2.1e-72, Sum P(3) = 2.1e-72
Identities = 67/169 (39%), Positives = 100/169 (59%)
Query: 399 ITMTDFEEATKMVQPSSRRE--GFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
I TDF EA K VQPSS R G + I V WE +GGL+ ++ + + + +KFP+E+
Sbjct: 427 IEETDFLEAFKKVQPSSFRSSIGLTDIRPVGWEQIGGLEDVKLKLKQCVEWPLKFPQEFA 486
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
G+ G LLYGPPGC KT + +A+A +F+ + G +L + +VG+SE + +F
Sbjct: 487 RMGLTQPKGLLLYGPPGCAKTTLVRALATSCHCSFVSVCGADLFSPFVGDSEKVLSQVFR 546
Query: 517 RARTCSPCILFFDEVDALTTKR--GKEGGWVVERLLNQLLIELDGADKR 563
+AR +P ++F DE+D++ R G G ER+L+ LL ELDG R
Sbjct: 547 QARANTPALVFLDEIDSVLGSRSVGSSGCDARERVLSVLLNELDGVGVR 595
Score = 305 (112.4 bits), Expect = 6.8e-24, Sum P(2) = 6.8e-24
Identities = 73/222 (32%), Positives = 114/222 (51%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++ +GG+E V +LK V PL PQ +G+ G+LLYGPPGC KT L A+A
Sbjct: 458 WEQIGGLEDVKLKLKQCVEWPLKFPQEFARMGLTQPKGLLLYGPPGCAKTTLVRALATSC 517
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE--NLQREM 240
F + ++ S G SE+ + +F +A P++VF+DEID++ R + +
Sbjct: 518 HCSFVSVCGADLFSPFVGDSEKVLSQVFRQARANTPALVFLDEIDSVLGSRSVGSSGCDA 577
Query: 241 ERRIVTQLMTCMDE-SHRLVQP-GXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPG 298
R+++ L+ +D R V+ G V+++ ATNRPD +D AL RPG
Sbjct: 578 RERVLSVLLNELDGVGVRTVERRGSKASQQECQEILSRSVMIVVATNRPDVLDDALLRPG 637
Query: 299 RFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARST 340
R D+ + + PD R+ IL V T N+ + + L +A T
Sbjct: 638 RLDKMVYVPPPDREGRLSILKVCTNNMPIGLNVSLENLAAET 679
Score = 150 (57.9 bits), Expect = 2.1e-72, Sum P(3) = 2.1e-72
Identities = 41/132 (31%), Positives = 65/132 (49%)
Query: 564 KGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHT 623
+ V ++ ATNRPDV+D A+LRPGR K++YVP P + R IL+ PI +V L
Sbjct: 615 RSVMIVVATNRPDVLDDALLRPGRLDKMVYVPPPDREGRLSILKVCTNNMPIGLNVSLEN 674
Query: 624 IAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPS 683
+A ++ C SG ++ + T T++ HF +AL + PS
Sbjct: 675 LA-AETCY-FSGADLRNLCKEAALFAL------QENGLEAT--TVEQEHFTEALKTVKPS 724
Query: 684 VSELQIQRYKTL 695
++ + Y+ L
Sbjct: 725 LTLKDLTFYENL 736
Score = 46 (21.3 bits), Expect = 8.7e-33, Sum P(2) = 8.7e-33
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 394 MERLTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLD 435
+E T+ F EA K V+PS + + N+ +++ L+
Sbjct: 704 LEATTVEQEHFTEALKTVKPSLTLKDLTFYENLFKKELSNLE 745
>GENEDB_PFALCIPARUM|PF14_0126 [details] [associations]
symbol:PF14_0126 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014187 HSSP:Q01853 GO:GO:0017111
RefSeq:XP_001348299.1 ProteinModelPortal:Q8ILW7 IntAct:Q8ILW7
MINT:MINT-1576109 EnsemblProtists:PF14_0126:mRNA GeneID:811707
KEGG:pfa:PF14_0126 EuPathDB:PlasmoDB:PF3D7_1412700 Uniprot:Q8ILW7
Length = 1219
Score = 497 (180.0 bits), Expect = 3.4e-72, Sum P(6) = 3.4e-72
Identities = 94/241 (39%), Positives = 147/241 (60%)
Query: 368 KSELSGNSIAEQHSDDWWRQPWLPEEMERL-TITMTDFEEATKMVQPSSRREGFSAIPNV 426
K+ L NS+ S+ + + L + +A K V+PS +E + IP
Sbjct: 773 KNHLYNNSLINTQSNSCHEKKMMNYNKNNLYLLRYKHLLKALKYVKPSGMKELYIDIPKT 832
Query: 427 KWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANE 486
+++D+GG +++ + ++ K+ Y+++ ++ G LLYGPPGC KTL AKA+A+E
Sbjct: 833 RFKDIGGYKFVKRCINECLIYPKKYKNIYDKYNIESPKGILLYGPPGCSKTLFAKAIASE 892
Query: 487 AGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVV 546
NFI +KGPE+ +KYVGESE ++R +F +AR PC++FFDE+D++ R +V
Sbjct: 893 IHMNFISVKGPEIFSKYVGESEKSIRNIFKKARENHPCVIFFDEIDSIAVNRNNNQNFVS 952
Query: 547 ERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLIL 606
R+L QLL E+DG R V ++ ATNRPD++D A++RPGRF +++YVPLP R IL
Sbjct: 953 NRVLCQLLNEIDGIKNRLNVIILAATNRPDLIDPALMRPGRFDRIIYVPLPNYSSRFAIL 1012
Query: 607 E 607
+
Sbjct: 1013 K 1013
Score = 242 (90.2 bits), Expect = 2.1e-25, Sum P(4) = 2.1e-25
Identities = 51/132 (38%), Positives = 75/132 (56%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
RF+D+GG + V + +I P + + + GILLYGPPGC KT A AIA+E
Sbjct: 833 RFKDIGGYKFVKRCINECLIYPKKYKNIYDKYNIESPKGILLYGPPGCSKTLFAKAIASE 892
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREME 241
+ F + E+ S G SE++IR++F KA P ++F DEID+IA R N Q +
Sbjct: 893 IHMNFISVKGPEIFSKYVGESEKSIRNIFKKARENHPCVIFFDEIDSIAVNRNNNQNFVS 952
Query: 242 RRIVTQLMTCMD 253
R++ QL+ +D
Sbjct: 953 NRVLCQLLNEID 964
Score = 127 (49.8 bits), Expect = 2.1e-25, Sum P(4) = 2.1e-25
Identities = 24/49 (48%), Positives = 37/49 (75%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLR 326
V+++ ATNRPD +DPAL RPGRFDR I + +P+ ++R ++L +NL+
Sbjct: 972 VIILAATNRPDLIDPALMRPGRFDRIIYVPLPNYSSR---FAILKKNLK 1017
Score = 114 (45.2 bits), Expect = 9.7e-10, Sum P(4) = 9.7e-10
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 431 VGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANE 486
+GG + ++ + YI+ + + Y+ + +D+ G LL+GPPGCGKT IA + E
Sbjct: 426 LGGYNKIKEDIYYYILIPLIYKHIYDAYHIDIHKGILLHGPPGCGKTYIALLIKEE 481
Score = 110 (43.8 bits), Expect = 9.7e-10, Sum P(4) = 9.7e-10
Identities = 33/97 (34%), Positives = 50/97 (51%)
Query: 507 SELAVRTLFSRARTCSPC-ILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKG 565
+EL +R R + + C I+F DE++ L KR + + + LL +DG K
Sbjct: 540 NELFLRC-HKRYQEENKCTIIFIDEIEILCKKREENNNMNI--YTSVLLNNMDGIKKHTH 596
Query: 566 VFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDER 602
+IGATN + +D A+ R GRF K + V LP +R
Sbjct: 597 TILIGATNYINKIDLALRRSGRFDKEIEVNLPNLKDR 633
Score = 106 (42.4 bits), Expect = 3.4e-72, Sum P(6) = 3.4e-72
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
LGG + E++ +++PL + + + GILL+GPPGCGKT +A I E
Sbjct: 426 LGGYNKIKEDIYYYILIPLIYKHIYDAYHIDIHKGILLHGPPGCGKTYIALLIKEE 481
Score = 98 (39.6 bits), Expect = 3.4e-72, Sum P(6) = 3.4e-72
Identities = 23/67 (34%), Positives = 40/67 (59%)
Query: 277 YVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQI----LSVLTRNLRVEGSFD 332
+ ++IGATN + +D ALRR GRFD+EI + +P+ R+ I L+++ N+ +
Sbjct: 596 HTILIGATNYINKIDLALRRSGRFDKEIEVNLPNLKDRISIFQKKLNLIKHNIGKKKIHK 655
Query: 333 LVKIARS 339
L + +S
Sbjct: 656 LADLCQS 662
Score = 55 (24.4 bits), Expect = 3.4e-72, Sum P(6) = 3.4e-72
Identities = 13/29 (44%), Positives = 14/29 (48%)
Query: 672 HFEQALSKISPSVSELQIQRYKTLSETFK 700
HF + L KI P SE I YK E K
Sbjct: 1190 HFLRVLKKIKPQTSESLINFYKNYKEQNK 1218
Score = 51 (23.0 bits), Expect = 3.4e-72, Sum P(6) = 3.4e-72
Identities = 9/16 (56%), Positives = 13/16 (81%)
Query: 219 SIVFIDEIDAIASKRE 234
+I+FIDEI+ + KRE
Sbjct: 557 TIIFIDEIEILCKKRE 572
Score = 40 (19.1 bits), Expect = 3.4e-72, Sum P(6) = 3.4e-72
Identities = 8/34 (23%), Positives = 17/34 (50%)
Query: 44 GEKVEPEFDLMKSMLRDSYSESKITRRKSEEKNI 77
G++ + E D K +D + ++K + +NI
Sbjct: 63 GQEKDQEKDQKKDQNKDQKKDQNKDQKKEQARNI 96
>UNIPROTKB|Q8ILW7 [details] [associations]
symbol:PF14_0126 "AAA family ATPase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014187 HSSP:Q01853 GO:GO:0017111
RefSeq:XP_001348299.1 ProteinModelPortal:Q8ILW7 IntAct:Q8ILW7
MINT:MINT-1576109 EnsemblProtists:PF14_0126:mRNA GeneID:811707
KEGG:pfa:PF14_0126 EuPathDB:PlasmoDB:PF3D7_1412700 Uniprot:Q8ILW7
Length = 1219
Score = 497 (180.0 bits), Expect = 3.4e-72, Sum P(6) = 3.4e-72
Identities = 94/241 (39%), Positives = 147/241 (60%)
Query: 368 KSELSGNSIAEQHSDDWWRQPWLPEEMERL-TITMTDFEEATKMVQPSSRREGFSAIPNV 426
K+ L NS+ S+ + + L + +A K V+PS +E + IP
Sbjct: 773 KNHLYNNSLINTQSNSCHEKKMMNYNKNNLYLLRYKHLLKALKYVKPSGMKELYIDIPKT 832
Query: 427 KWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANE 486
+++D+GG +++ + ++ K+ Y+++ ++ G LLYGPPGC KTL AKA+A+E
Sbjct: 833 RFKDIGGYKFVKRCINECLIYPKKYKNIYDKYNIESPKGILLYGPPGCSKTLFAKAIASE 892
Query: 487 AGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVV 546
NFI +KGPE+ +KYVGESE ++R +F +AR PC++FFDE+D++ R +V
Sbjct: 893 IHMNFISVKGPEIFSKYVGESEKSIRNIFKKARENHPCVIFFDEIDSIAVNRNNNQNFVS 952
Query: 547 ERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLIL 606
R+L QLL E+DG R V ++ ATNRPD++D A++RPGRF +++YVPLP R IL
Sbjct: 953 NRVLCQLLNEIDGIKNRLNVIILAATNRPDLIDPALMRPGRFDRIIYVPLPNYSSRFAIL 1012
Query: 607 E 607
+
Sbjct: 1013 K 1013
Score = 242 (90.2 bits), Expect = 2.1e-25, Sum P(4) = 2.1e-25
Identities = 51/132 (38%), Positives = 75/132 (56%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
RF+D+GG + V + +I P + + + GILLYGPPGC KT A AIA+E
Sbjct: 833 RFKDIGGYKFVKRCINECLIYPKKYKNIYDKYNIESPKGILLYGPPGCSKTLFAKAIASE 892
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREME 241
+ F + E+ S G SE++IR++F KA P ++F DEID+IA R N Q +
Sbjct: 893 IHMNFISVKGPEIFSKYVGESEKSIRNIFKKARENHPCVIFFDEIDSIAVNRNNNQNFVS 952
Query: 242 RRIVTQLMTCMD 253
R++ QL+ +D
Sbjct: 953 NRVLCQLLNEID 964
Score = 127 (49.8 bits), Expect = 2.1e-25, Sum P(4) = 2.1e-25
Identities = 24/49 (48%), Positives = 37/49 (75%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLR 326
V+++ ATNRPD +DPAL RPGRFDR I + +P+ ++R ++L +NL+
Sbjct: 972 VIILAATNRPDLIDPALMRPGRFDRIIYVPLPNYSSR---FAILKKNLK 1017
Score = 114 (45.2 bits), Expect = 9.7e-10, Sum P(4) = 9.7e-10
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 431 VGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANE 486
+GG + ++ + YI+ + + Y+ + +D+ G LL+GPPGCGKT IA + E
Sbjct: 426 LGGYNKIKEDIYYYILIPLIYKHIYDAYHIDIHKGILLHGPPGCGKTYIALLIKEE 481
Score = 110 (43.8 bits), Expect = 9.7e-10, Sum P(4) = 9.7e-10
Identities = 33/97 (34%), Positives = 50/97 (51%)
Query: 507 SELAVRTLFSRARTCSPC-ILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKG 565
+EL +R R + + C I+F DE++ L KR + + + LL +DG K
Sbjct: 540 NELFLRC-HKRYQEENKCTIIFIDEIEILCKKREENNNMNI--YTSVLLNNMDGIKKHTH 596
Query: 566 VFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDER 602
+IGATN + +D A+ R GRF K + V LP +R
Sbjct: 597 TILIGATNYINKIDLALRRSGRFDKEIEVNLPNLKDR 633
Score = 106 (42.4 bits), Expect = 3.4e-72, Sum P(6) = 3.4e-72
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
LGG + E++ +++PL + + + GILL+GPPGCGKT +A I E
Sbjct: 426 LGGYNKIKEDIYYYILIPLIYKHIYDAYHIDIHKGILLHGPPGCGKTYIALLIKEE 481
Score = 98 (39.6 bits), Expect = 3.4e-72, Sum P(6) = 3.4e-72
Identities = 23/67 (34%), Positives = 40/67 (59%)
Query: 277 YVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQI----LSVLTRNLRVEGSFD 332
+ ++IGATN + +D ALRR GRFD+EI + +P+ R+ I L+++ N+ +
Sbjct: 596 HTILIGATNYINKIDLALRRSGRFDKEIEVNLPNLKDRISIFQKKLNLIKHNIGKKKIHK 655
Query: 333 LVKIARS 339
L + +S
Sbjct: 656 LADLCQS 662
Score = 55 (24.4 bits), Expect = 3.4e-72, Sum P(6) = 3.4e-72
Identities = 13/29 (44%), Positives = 14/29 (48%)
Query: 672 HFEQALSKISPSVSELQIQRYKTLSETFK 700
HF + L KI P SE I YK E K
Sbjct: 1190 HFLRVLKKIKPQTSESLINFYKNYKEQNK 1218
Score = 51 (23.0 bits), Expect = 3.4e-72, Sum P(6) = 3.4e-72
Identities = 9/16 (56%), Positives = 13/16 (81%)
Query: 219 SIVFIDEIDAIASKRE 234
+I+FIDEI+ + KRE
Sbjct: 557 TIIFIDEIEILCKKRE 572
Score = 40 (19.1 bits), Expect = 3.4e-72, Sum P(6) = 3.4e-72
Identities = 8/34 (23%), Positives = 17/34 (50%)
Query: 44 GEKVEPEFDLMKSMLRDSYSESKITRRKSEEKNI 77
G++ + E D K +D + ++K + +NI
Sbjct: 63 GQEKDQEKDQKKDQNKDQKKDQNKDQKKEQARNI 96
>UNIPROTKB|F1NLN4 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
Uniprot:F1NLN4
Length = 704
Score = 411 (149.7 bits), Expect = 8.1e-72, Sum P(2) = 8.1e-72
Identities = 92/243 (37%), Positives = 140/243 (57%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVP 185
+GG+ S L+ ++ V +PL +L + G+ P G+LLYGPPG GKT +A AIANE G
Sbjct: 320 IGGLSSQLKTIRETVELPLKRAELFKSYGISPPRGVLLYGPPGTGKTLIAKAIANEVGAH 379
Query: 186 FYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIV 245
I+ E++S G SE +R +F++A PSI+FIDE+DA+ KRE Q E+E+R+V
Sbjct: 380 VTVINGPEIISKFYGESESRLRQIFAEASLRRPSIIFIDELDALCPKREGAQNEVEKRVV 439
Query: 246 TQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDREIV 305
L+T MD + G G ++V+GATNRP A+D ALRRPGRFD+EI
Sbjct: 440 ASLLTLMDG---IGSEGSE-----------GQLVVLGATNRPHALDAALRRPGRFDKEIE 485
Query: 306 LGVPDENARVQILSVLTRNLRVE-GSFDLVKIARSTPGFVXXXXXXXXXXXXXXXMKRII 364
+G+P+ R+ IL L + + + +++++A S G+V ++R +
Sbjct: 486 IGIPNAQDRLDILQKLLKKVPHSLTAAEMMQLADSAHGYVGADLAALCKEAGLYALRRAL 545
Query: 365 DQR 367
+R
Sbjct: 546 GKR 548
Score = 379 (138.5 bits), Expect = 8.1e-72, Sum P(2) = 8.1e-72
Identities = 71/141 (50%), Positives = 97/141 (68%)
Query: 399 ITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEF 458
I DF + K V+PS+ RE +P V W D+GGL+ ++ + + + +K P+ +
Sbjct: 562 IAFNDFLQGMKDVRPSAMREVAVDVPKVSWSDIGGLEDVKLKLKQAVEWPLKHPDSFIRM 621
Query: 459 GVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRA 518
G+ G LLYGPPGC KT+IAKA+A+E+G NF+ +KGPEL+NKYVGESE AVR +F +A
Sbjct: 622 GIQPPKGVLLYGPPGCSKTMIAKALAHESGLNFLAVKGPELMNKYVGESERAVREIFRKA 681
Query: 519 RTCSPCILFFDEVDALTTKRG 539
R SP ILFFDE+DAL +RG
Sbjct: 682 RMVSPSILFFDEIDALAVERG 702
Score = 365 (133.5 bits), Expect = 1.2e-30, P = 1.2e-30
Identities = 80/194 (41%), Positives = 117/194 (60%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P V ++ +GGL + +K E ++ +G+ G LLYGPPG GKTLIAKA+
Sbjct: 313 PQVTYDMIGGLSSQLKTIRETVELPLKRAELFKSYGISPPRGVLLYGPPGTGKTLIAKAI 372
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGG 543
ANE GA+ I GPE+++K+ GESE +R +F+ A P I+F DE+DAL KR
Sbjct: 373 ANEVGAHVTVINGPEIISKFYGESESRLRQIFAEASLRRPSIIFIDELDALCPKREGAQN 432
Query: 544 WVVERLLNQLLIELDG--ADKRKG-VFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
V +R++ LL +DG ++ +G + V+GATNRP +D A+ RPGRF K + + +P
Sbjct: 433 EVEKRVVASLLTLMDGIGSEGSEGQLVVLGATNRPHALDAALRRPGRFDKEIEIGIPNAQ 492
Query: 601 ERGLILEALARKKP 614
+R IL+ L +K P
Sbjct: 493 DRLDILQKLLKKVP 506
Score = 263 (97.6 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 51/113 (45%), Positives = 75/113 (66%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+E V +LK V PL HP +G++P G+LLYGPPGC KT +A A+A+E+
Sbjct: 591 WSDIGGLEDVKLKLKQAVEWPLKHPDSFIRMGIQPPKGVLLYGPPGCSKTMIAKALAHES 650
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKREN 235
G+ F + E+++ G SE +R++F KA +PSI+F DEIDA+A +R N
Sbjct: 651 GLNFLAVKGPELMNKYVGESERAVREIFRKARMVSPSILFFDEIDALAVERGN 703
>UNIPROTKB|F1NYD5 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0016561
"protein import into peroxisome matrix, translocation"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0050821
"protein stabilization" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0042623 GO:GO:0016561 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:AADN02041201 EMBL:AADN02041202
IPI:IPI00590743 Ensembl:ENSGALT00000013960 Uniprot:F1NYD5
Length = 680
Score = 621 (223.7 bits), Expect = 5.3e-71, Sum P(2) = 5.3e-71
Identities = 163/432 (37%), Positives = 233/432 (53%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
VLVIG T +P V ++ F E+ + E+ R +LS+LT +L + L K+A
Sbjct: 267 VLVIGTTCKPQDVPTDVQTA--FLHEVKIEALSEDQRRAMLSMLTASLPLGKEVSLAKLA 324
Query: 338 RSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMERL 397
R T GFV RI Q S G + E+ D+ + P E
Sbjct: 325 RRTAGFVLGDFCALLSHSSRAACTRI--QALSFPGG--LNEEVERDFCTAGF-PVLEEDF 379
Query: 398 TITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEE 457
+ + +A S+ G IP+V W+DVGGL HE + I+ I+ P E+ E
Sbjct: 380 NVALDQLHDA------HSQAVGAPKIPSVSWQDVGGL----HEVKKEILDTIQLPLEHPE 429
Query: 458 F-GVDL-ETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLF 515
+ L +G LLYGPPG GKTL+AKAVA F+ +KGPEL+N YVG+SE VR +F
Sbjct: 430 LLSLGLCRSGLLLYGPPGTGKTLLAKAVATTCTMTFLSVKGPELINMYVGQSEENVRNVF 489
Query: 516 SRARTCSPCILFFDEVDALTTKRGKEG--GWVVERLLNQLLIELDGADKRKGVFVIGATN 573
+RAR +PCI+FFDE+D+L RG+ G G V++R+++QLL ELDG + VFVIGATN
Sbjct: 490 ARARAAAPCIIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGLHSSREVFVIGATN 549
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGL-ILEALARKKPIDDSVDLHTIAQSKFCE- 631
RPD++D A+LRPGRF KL+YV + E L +L A+ RK +D SV+L +I + C
Sbjct: 550 RPDLLDPALLRPGRFDKLVYVGVNEDRESQLQVLSAVTRKFKLDPSVNLSSILEE--CPA 607
Query: 632 NLSGXXXXXXXXXXXXXXXXXKL--ISSKSSSDVTPFTIKLTHFEQALSKISPSVSELQI 689
L+G K+ I ++ + + + F QA +++ PSVSE ++
Sbjct: 608 QLTGADIYSLCSDAMMCAVKRKVEWIEEGLDTESSALILTMEDFLQAAARLQPSVSEQEL 667
Query: 690 QRYKTLSETFKA 701
RYK + + F A
Sbjct: 668 LRYKLIQQKFAA 679
Score = 360 (131.8 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 85/222 (38%), Positives = 130/222 (58%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+QD+GG+ V +E+ + +PL HP+L LG+ +G+LLYGPPG GKT LA A+A
Sbjct: 404 WQDVGGLHEVKKEILDTIQLPLEHPELLS-LGLC-RSGLLLYGPPGTGKTLLAKAVATTC 461
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQRE--M 240
+ F + E+++ G SEEN+R++F++A AP I+F DE+D++A R +
Sbjct: 462 TMTFLSVKGPELINMYVGQSEENVRNVFARARAAAPCIIFFDELDSLAPNRGRSGDSGGV 521
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRF 300
R+V+QL+ +D H + V VIGATNRPD +DPAL RPGRF
Sbjct: 522 MDRVVSQLLAELDGLHSSRE-----------------VFVIGATNRPDLLDPALLRPGRF 564
Query: 301 DREIVLGV-PDENARVQILSVLTRNLRVEGSFDLVKIARSTP 341
D+ + +GV D +++Q+LS +TR +++ S +L I P
Sbjct: 565 DKLVYVGVNEDRESQLQVLSAVTRKFKLDPSVNLSSILEECP 606
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 43/161 (26%), Positives = 70/161 (43%)
Query: 467 LLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCIL 526
LL GP G GKT+ +AV + + + L +E + F++A+ PC+L
Sbjct: 167 LLSGPSGSGKTMAVRAVCSCLNLHLFKVDCVSLCGDTSAATEEKIHMAFAQAQQYHPCVL 226
Query: 527 FFDEVDALTTKRGKEGGWV-VERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRP 585
+++ L R + G V L QLL++ D A V VIG T +P + V
Sbjct: 227 LLKDIEVLGRDRDRLGEDARVIATLRQLLLDRDPAQSSHPVLVIGTTCKPQDVPTDVQTA 286
Query: 586 GRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 626
F + + + D+R +L L P+ V L +A+
Sbjct: 287 --FLHEVKIEALSEDQRRAMLSMLTASLPLGKEVSLAKLAR 325
Score = 116 (45.9 bits), Expect = 5.3e-71, Sum P(2) = 5.3e-71
Identities = 32/122 (26%), Positives = 55/122 (45%)
Query: 133 LEELKMEVIVPLYHPQLPQWLGVRPMAG-ILLYGPPGCGKTKLAHAIANETGVPFYKISA 191
L ++ E+ L P L AG +LL GP G GKT A+ + + +K+
Sbjct: 138 LSDVVKEICDAL-RPHLTSQAAALSGAGSVLLSGPSGSGKTMAVRAVCSCLNLHLFKVDC 196
Query: 192 TEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIVTQLMTC 251
+ S A+EE I F++A + P ++ + +I+ + R+ L + R I T
Sbjct: 197 VSLCGDTSAATEEKIHMAFAQAQQYHPCVLLLKDIEVLGRDRDRLGEDA-RVIATLRQLL 255
Query: 252 MD 253
+D
Sbjct: 256 LD 257
>DICTYBASE|DDB_G0282241 [details] [associations]
symbol:DDB_G0282241 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0282241 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 EMBL:AAFI02000046 RefSeq:XP_640304.1
ProteinModelPortal:Q54ST1 EnsemblProtists:DDB0205288 GeneID:8623480
KEGG:ddi:DDB_G0282241 InParanoid:Q54ST1 OMA:IEMISID Uniprot:Q54ST1
Length = 825
Score = 454 (164.9 bits), Expect = 6.8e-71, Sum P(2) = 6.8e-71
Identities = 99/251 (39%), Positives = 147/251 (58%)
Query: 392 EEMERLTITMTDFEEATKMVQPSSRREG---FSAIPNVKWEDVGGLDYLRHEFDRYIVRR 448
E ++ I + DF E+ K P+S +G I NV W+D+GGLD ++ E + I
Sbjct: 531 ENEKKYLIEIEDFRESIKN-NPASILKGEHLVENISNVSWDDIGGLDDIKEELRQAIEWP 589
Query: 449 IKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESE 508
+ E +E+FG+ G +LYGPPGC KT + KAVA+ + +F+ + G + + Y+G+SE
Sbjct: 590 NLYKESFEKFGLSPPKGIILYGPPGCSKTTLVKAVASSSKLSFLSLSGATIFSPYLGDSE 649
Query: 509 LAVRTLFSRARTCSPCILFFDEVDALTTKRG----KEGGWVVERLLNQLLIELDGADKRK 564
+R +F +AR +P ILFFDE+DA+ +KR G R+L+ L E+DG ++
Sbjct: 650 QTIRDIFKKARQTTPSILFFDEIDAIVSKRNLSDNSSGDNAQSRVLSTFLNEMDGVEQLN 709
Query: 565 GVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTI 624
GV VIGATNR D++D A+LRPGRF K+L + LP R IL+ + P+ D+V+L I
Sbjct: 710 GVIVIGATNRLDMIDNALLRPGRFDKILEIKLPDQLSRLKILKIKTKSIPLSDNVNLIEI 769
Query: 625 AQSKFCENLSG 635
S SG
Sbjct: 770 --SNLTNGFSG 778
Score = 368 (134.6 bits), Expect = 8.4e-31, P = 8.4e-31
Identities = 83/225 (36%), Positives = 133/225 (59%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG++ + EEL+ + P + + + G+ P GI+LYGPPGC KT L A+A+ +
Sbjct: 569 WDDIGGLDDIKEELRQAIEWPNLYKESFEKFGLSPPKGIILYGPPGCSKTTLVKAVASSS 628
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR---ENLQRE 239
+ F +S + S G SE+ IRD+F KA +T PSI+F DEIDAI SKR +N +
Sbjct: 629 KLSFLSLSGATIFSPYLGDSEQTIRDIFKKARQTTPSILFFDEIDAIVSKRNLSDNSSGD 688
Query: 240 -MERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPG 298
+ R+++ + MD +L V+VIGATNR D +D AL RPG
Sbjct: 689 NAQSRVLSTFLNEMDGVEQL-----------------NGVIVIGATNRLDMIDNALLRPG 731
Query: 299 RFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
RFD+ + + +PD+ +R++IL + T+++ + + +L++I+ T GF
Sbjct: 732 RFDKILEIKLPDQLSRLKILKIKTKSIPLSDNVNLIEISNLTNGF 776
Score = 297 (109.6 bits), Expect = 6.8e-71, Sum P(2) = 6.8e-71
Identities = 76/227 (33%), Positives = 116/227 (51%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVP 185
+GG+ ++ L+ +I P+ PQ+ + L + P GILL GPPG GKT L + + +
Sbjct: 289 IGGLNEQIKLLEEMMIYPILFPQVFKTLNIDPPKGILLKGPPGTGKTHLVRTVCDAYDIE 348
Query: 186 FYKISATEVVSGVSGASEENIRDLFSKAY------RTAPSIVFIDEIDAIASKRENLQRE 239
I ++ G +EEN+R++F +A +P +VFIDEID I R +
Sbjct: 349 MISIDCAKISGSYIGETEENLRNIFQEASDKSIAKSNSPIVVFIDEIDTICPPRSK-STQ 407
Query: 240 MERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
E R+V Q +T +D G +++I ATNRP+ +D ALRRPGR
Sbjct: 408 NESRVVGQFLTLLD----------------GIGARKGNLIIIAATNRPNQIDNALRRPGR 451
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFD--LVKIARSTPGFV 344
DREI + VP++ R+ IL + L + + L +IA T G+V
Sbjct: 452 LDREIEIPVPNKQQRLDILKLYCSKLPISPTPSNLLDQIADETVGYV 498
Score = 275 (101.9 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 65/192 (33%), Positives = 102/192 (53%)
Query: 431 VGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGAN 490
+GGL+ + ++ I FP+ ++ +D G LL GPPG GKT + + V +
Sbjct: 289 IGGLNEQIKLLEEMMIYPILFPQVFKTLNIDPPKGILLKGPPGTGKTHLVRTVCDAYDIE 348
Query: 491 FIHIKGPELLNKYVGESELAVRTLF------SRARTCSPCILFFDEVDALTTKRGKEGGW 544
I I ++ Y+GE+E +R +F S A++ SP ++F DE+D + R K
Sbjct: 349 MISIDCAKISGSYIGETEENLRNIFQEASDKSIAKSNSPIVVFIDEIDTICPPRSKSTQ- 407
Query: 545 VVERLLNQLLIELDGADKRKG-VFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERG 603
R++ Q L LDG RKG + +I ATNRP+ +D A+ RPGR + + +P+P +R
Sbjct: 408 NESRVVGQFLTLLDGIGARKGNLIIIAATNRPNQIDNALRRPGRLDREIEIPVPNKQQRL 467
Query: 604 LILEALARKKPI 615
IL+ K PI
Sbjct: 468 DILKLYCSKLPI 479
>UNIPROTKB|Q60HE0 [details] [associations]
symbol:PEX6 "Peroxin Pex6p" species:9541 "Macaca
fascicularis" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006625 "protein targeting to
peroxisome" evidence=ISS] [GO:0007031 "peroxisome organization"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0042623 "ATPase activity, coupled" evidence=ISS] [GO:0050821
"protein stabilization" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0032403 GO:GO:0008022 GO:GO:0042623
GO:GO:0016561 HOVERGEN:HBG002311 EMBL:AB125187
ProteinModelPortal:Q60HE0 Uniprot:Q60HE0
Length = 570
Score = 568 (205.0 bits), Expect = 1.6e-69, Sum P(2) = 1.6e-69
Identities = 152/433 (35%), Positives = 228/433 (52%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
++V+ T+R + PA + F E+ + E R+ IL LT +L + +L ++A
Sbjct: 157 LMVVATTSRAQDL-PADVQTA-FPHELEVPALSEGQRLSILRALTAHLPLGQEVNLAQLA 214
Query: 338 RSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMERL 397
R GFV RI + L+G + E+ + + P
Sbjct: 215 RRCAGFVVGDLYALLTHSSRAACTRI---KNLGLAGG-LTEEDEGELCAAGF-P------ 263
Query: 398 TITMTDFEEATKMVQPS-SRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
+ DF +A ++ Q + S+ G IP+V W DVGGL ++ E I+ I+ P E+
Sbjct: 264 -LLAEDFGQALELQQTAHSQAVGAPKIPSVSWHDVGGLQEVKKE----ILETIQLPLEHP 318
Query: 457 EF-GVDLE-TGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTL 514
E + L +G LL+GPPG GKTL+AKAVA E F+ +KGPEL+N YVG+SE VR +
Sbjct: 319 ELLSLGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREV 378
Query: 515 FSRARTCSPCILFFDEVDALTTKRGKEG--GWVVERLLNQLLIELDGADKRKGVFVIGAT 572
F+RAR +PCI+FFDE+D+L RG+ G G V++R+++QLL ELDG + VFVIGAT
Sbjct: 379 FARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGAT 438
Query: 573 NRPDVMDRAVLRPGRFGKLLYVPLPTPDERGL-ILEALARKKPIDDSVDLHTIAQSKFCE 631
NRPD++D A+LRPGRF KL++V L +L A+ RK ++ SV L + C
Sbjct: 439 NRPDLLDPALLRPGRFDKLVFVGANEDRASQLRVLSAITRKFKLEPSVSLVNVLDC--CP 496
Query: 632 -NLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFE--QALSKISPSVSELQ 688
L+G ++ + + + LT + QA +++ PSVSE +
Sbjct: 497 PQLTGADLYSLCSDAMTAALKRRVHDLEEGLEPGSSALMLTMEDLLQAAARLQPSVSEQE 556
Query: 689 IQRYKTLSETFKA 701
+ RYK + F A
Sbjct: 557 LLRYKRIQHKFAA 569
Score = 367 (134.2 bits), Expect = 2.4e-31, P = 2.4e-31
Identities = 84/222 (37%), Positives = 131/222 (59%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG++ V +E+ + +PL HP+L LG+R +G+LL+GPPG GKT LA A+A E
Sbjct: 294 WHDVGGLQEVKKEILETIQLPLEHPELLS-LGLR-RSGLLLHGPPGTGKTLLAKAVATEC 351
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQRE--M 240
+ F + E+++ G SEEN+R++F++A AP I+F DE+D++A R +
Sbjct: 352 SLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGV 411
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRF 300
R+V+QL+ +D H V VIGATNRPD +DPAL RPGRF
Sbjct: 412 MDRVVSQLLAELDGLHSTQD-----------------VFVIGATNRPDLLDPALLRPGRF 454
Query: 301 DREIVLGVPDENA-RVQILSVLTRNLRVEGSFDLVKIARSTP 341
D+ + +G ++ A ++++LS +TR ++E S LV + P
Sbjct: 455 DKLVFVGANEDRASQLRVLSAITRKFKLEPSVSLVNVLDCCP 496
Score = 172 (65.6 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 50/161 (31%), Positives = 73/161 (45%)
Query: 467 LLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCIL 526
LL GPPGCGKT + A ++ G + + + L G E ++ +FSRAR C P +L
Sbjct: 57 LLRGPPGCGKTTVVAAACSQLGLHLLKVPCSSLCADSSGAVETKLQAIFSRARRCRPAVL 116
Query: 527 FFDEVDALTTKRGKEGGWV-VERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRP 585
VD L R G V L LL++ D + + V+ T+R + V
Sbjct: 117 LLTAVDLLGRDRDGLGEDARVVAALRHLLLDEDPLNSCPPLMVVATTSRAQDLPADVQTA 176
Query: 586 GRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 626
F L VP + +R IL AL P+ V+L +A+
Sbjct: 177 --FPHELEVPALSEGQRLSILRALTAHLPLGQEVNLAQLAR 215
Score = 155 (59.6 bits), Expect = 1.6e-69, Sum P(2) = 1.6e-69
Identities = 38/128 (29%), Positives = 67/128 (52%)
Query: 128 GMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVPFY 187
G+E+++ EL V+ P P G + +LL GPPGCGKT + A ++ G+
Sbjct: 27 GLEALVSEL-CAVLKPRLQPGGALLTGT---SSVLLRGPPGCGKTTVVAAACSQLGLHLL 82
Query: 188 KISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIVTQ 247
K+ + + + SGA E ++ +FS+A R P+++ + +D + R+ L + R+V
Sbjct: 83 KVPCSSLCADSSGAVETKLQAIFSRARRCRPAVLLLTAVDLLGRDRDGLGEDA--RVVAA 140
Query: 248 LM-TCMDE 254
L +DE
Sbjct: 141 LRHLLLDE 148
>FB|FBgn0032450 [details] [associations]
symbol:CG5776 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014134 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 KO:K14575 GeneTree:ENSGT00700000104502 OMA:MLLRCVA
EMBL:AY051725 RefSeq:NP_609585.1 UniGene:Dm.8715 SMR:Q9VK63
EnsemblMetazoa:FBtr0080407 EnsemblMetazoa:FBtr0329925 GeneID:34680
KEGG:dme:Dmel_CG5776 UCSC:CG5776-RA FlyBase:FBgn0032450
InParanoid:Q9VK63 OrthoDB:EOG4547DV GenomeRNAi:34680 NextBio:789659
Uniprot:Q9VK63
Length = 799
Score = 510 (184.6 bits), Expect = 5.4e-68, Sum P(2) = 5.4e-68
Identities = 116/300 (38%), Positives = 167/300 (55%)
Query: 399 ITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEF 458
+ M + A ++PS+ RE PNV+W D+GG LR + I + ++++
Sbjct: 505 LQMPHLQAALTRIKPSAMREVLIECPNVQWSDIGGQSELRLAMQQAIEWPLLHADKFQRL 564
Query: 459 GVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRA 518
G+ G L++GPPGC KT+IAKA+A E+ NF+ IKGPEL + +VGESE AVR +F +A
Sbjct: 565 GIKPPRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERAVREVFRKA 624
Query: 519 RTCSPCILFFDEVDALTTKRGK-----EGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
R +P I+FFDE+DA+ +R + G V ER+L QLL ELDG + + V ++ ATN
Sbjct: 625 RQVAPAIVFFDEIDAIGGERSEGDGSSSGSSVKERVLTQLLTELDGVEALQNVTIVAATN 684
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENL 633
RPD++D+A+LRPGR ++LYV LP + R IL+ R PI + VD+ + Q E
Sbjct: 685 RPDMIDKALLRPGRIDRILYVGLPQCEARREILKIKLRAMPISNDVDMEKLVQ--LTEGY 742
Query: 634 SGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYK 693
SG L S + DV K T FE AL + P S ++ Y+
Sbjct: 743 SGAEIQAVCHEAALRA----LEQSFEAEDV-----KWTDFEHALKAVPPRTSPELLKLYE 793
Score = 350 (128.3 bits), Expect = 4.8e-29, Sum P(2) = 4.8e-29
Identities = 81/227 (35%), Positives = 124/227 (54%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
++ D+GG + ++ + PL H Q LG++P GIL++GPPGC KT +A A+A E
Sbjct: 533 QWSDIGGQSELRLAMQQAIEWPLLHADKFQRLGIKPPRGILMFGPPGCSKTMIAKALATE 592
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE-----NL 236
+ + F I E+ S G SE +R++F KA + AP+IVF DEIDAI +R +
Sbjct: 593 SKLNFLSIKGPELFSMWVGESERAVREVFRKARQVAPAIVFFDEIDAIGGERSEGDGSSS 652
Query: 237 QREMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRR 296
++ R++TQL+T +D L V ++ ATNRPD +D AL R
Sbjct: 653 GSSVKERVLTQLLTELDGVEALQN-----------------VTIVAATNRPDMIDKALLR 695
Query: 297 PGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
PGR DR + +G+P AR +IL + R + + D+ K+ + T G+
Sbjct: 696 PGRIDRILYVGLPQCEARREILKIKLRAMPISNDVDMEKLVQLTEGY 742
Score = 208 (78.3 bits), Expect = 5.4e-68, Sum P(2) = 5.4e-68
Identities = 61/228 (26%), Positives = 116/228 (50%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHA---IANET 182
+GG++ L+ ++ + L LP G+R G+LLYG GCGK+ + A +A E
Sbjct: 274 IGGLDRQLQLVEESMEYALGFRTLPA--GLRVSRGLLLYGATGCGKSMVLEAMCAVAEER 331
Query: 183 G---VPFYKISATEVVSGVSGASEENIRDLFSKAYR--TAPSIVFIDEIDAIASKRENLQ 237
V +I++ EV S G +E+ + +F +AY P+++ I+++ + K+EN
Sbjct: 332 SQGHVQLIRINSGEVYSKFLGETEQKLGAIFERAYNHYPHPTLLLIEDVHNLCPKQEN-- 389
Query: 238 REMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRP 297
++ +R+ ++ +D+ L P V+ +++ D + P++RR
Sbjct: 390 SDLVKRVSLAFLSLLDQ---LSSPSQLKGSKT---------FVLATSSQIDTLHPSIRRA 437
Query: 298 GRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVK-IARSTPGFV 344
GR D E+ LG P AR++I+ L +++ + S + V+ +A T G+V
Sbjct: 438 GRLDNEVELGAPSSQARLEIVRCLIKSVEHQLSDEEVEHVASITHGYV 485
Score = 150 (57.9 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 61/246 (24%), Positives = 111/246 (45%)
Query: 459 GVDLETGFLLYGPPGCGKTLIAKA---VANEAG---ANFIHIKGPELLNKYVGESELAVR 512
G+ + G LLYG GCGK+++ +A VA E I I E+ +K++GE+E +
Sbjct: 300 GLRVSRGLLLYGATGCGKSMVLEAMCAVAEERSQGHVQLIRINSGEVYSKFLGETEQKLG 359
Query: 513 TLFSRARTC--SPCILFFDEVDALTTKRGKEGGWVVERL---LNQLLIELDGADKRKG-- 565
+F RA P +L ++V L K+ E +V+R+ LL +L + KG
Sbjct: 360 AIFERAYNHYPHPTLLLIEDVHNLCPKQ--ENSDLVKRVSLAFLSLLDQLSSPSQLKGSK 417
Query: 566 VFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
FV+ +++ D + ++ R GR + + P+ R I+ L + SV+ H ++
Sbjct: 418 TFVLATSSQIDTLHPSIRRAGRLDNEVELGAPSSQARLEIVRCLIK------SVE-HQLS 470
Query: 626 QSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPS-V 684
+ E+++ L P +++ H + AL++I PS +
Sbjct: 471 DEEV-EHVASITHGYVGADLANLVYAAML-------QAQPNPLQMPHLQAALTRIKPSAM 522
Query: 685 SELQIQ 690
E+ I+
Sbjct: 523 REVLIE 528
Score = 47 (21.6 bits), Expect = 4.8e-29, Sum P(2) = 4.8e-29
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 390 LPEEMERLTITMTDFEEATKMVQPSSRRE 418
L + E + TDFE A K V P + E
Sbjct: 759 LEQSFEAEDVKWTDFEHALKAVPPRTSPE 787
>UNIPROTKB|Q13608 [details] [associations]
symbol:PEX6 "Peroxisome assembly factor 2" species:9606
"Homo sapiens" [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007031 "peroxisome
organization" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0005777 "peroxisome" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006625 "protein targeting to
peroxisome" evidence=IMP] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=IMP] [GO:0050821 "protein stabilization"
evidence=IMP] [GO:0005524 "ATP binding" evidence=IMP] [GO:0042623
"ATPase activity, coupled" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006200 "ATP catabolic process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0032403 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
Orphanet:912 TCDB:3.A.20.1.1 Orphanet:772 Orphanet:44 GO:GO:0016561
HOGENOM:HOG000241031 KO:K13339 EMBL:U56602 EMBL:D83703
EMBL:AF108098 EMBL:AF108095 EMBL:AF108096 EMBL:AF108097
EMBL:AB051076 EMBL:BC048331 IPI:IPI00299182 PIR:S71090
RefSeq:NP_000278.3 UniGene:Hs.656425 ProteinModelPortal:Q13608
SMR:Q13608 IntAct:Q13608 MINT:MINT-1183928 STRING:Q13608
PhosphoSite:Q13608 DMDM:12644408 PaxDb:Q13608 PRIDE:Q13608
Ensembl:ENST00000304611 GeneID:5190 KEGG:hsa:5190 UCSC:uc003otf.3
CTD:5190 GeneCards:GC06M042978 HGNC:HGNC:8859 HPA:HPA025924
MIM:601498 MIM:614862 MIM:614863 neXtProt:NX_Q13608
PharmGKB:PA33201 HOVERGEN:HBG002311 InParanoid:Q13608 OMA:SWHDVGG
OrthoDB:EOG47WNNP PhylomeDB:Q13608 GenomeRNAi:5190 NextBio:20072
ArrayExpress:Q13608 Bgee:Q13608 CleanEx:HS_PEX6
Genevestigator:Q13608 GermOnline:ENSG00000124587 Uniprot:Q13608
Length = 980
Score = 575 (207.5 bits), Expect = 5.6e-68, Sum P(2) = 5.6e-68
Identities = 153/433 (35%), Positives = 229/433 (52%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
++V+ T+R + PA + F E+ + E R+ IL LT +L + +L ++A
Sbjct: 567 LMVVATTSRAQDL-PADVQTA-FPHELEVPALSEGQRLSILRALTAHLPLGQEVNLAQLA 624
Query: 338 RSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMERL 397
R GFV RI + S L+G + E+ + + P
Sbjct: 625 RRCAGFVVGDLYALLTHSSRAACTRI---KNSGLAGG-LTEEDEGELCAAGF-P------ 673
Query: 398 TITMTDFEEATKMVQPS-SRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
+ DF +A + +Q + S+ G IP+V W DVGGL ++ E I+ I+ P E+
Sbjct: 674 -LLAEDFGQALEQLQTAHSQAVGAPKIPSVSWHDVGGLQEVKKE----ILETIQLPLEHP 728
Query: 457 EF-GVDLE-TGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTL 514
E + L +G LL+GPPG GKTL+AKAVA E F+ +KGPEL+N YVG+SE VR +
Sbjct: 729 ELLSLGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREV 788
Query: 515 FSRARTCSPCILFFDEVDALTTKRGKEG--GWVVERLLNQLLIELDGADKRKGVFVIGAT 572
F+RAR +PCI+FFDE+D+L RG+ G G V++R+++QLL ELDG + VFVIGAT
Sbjct: 789 FARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGAT 848
Query: 573 NRPDVMDRAVLRPGRFGKLLYVPLPTPDERGL-ILEALARKKPIDDSVDLHTIAQSKFCE 631
NRPD++D A+LRPGRF KL++V L +L A+ RK ++ SV L + C
Sbjct: 849 NRPDLLDPALLRPGRFDKLVFVGANEDRASQLRVLSAITRKFKLEPSVSLVNVLDC--CP 906
Query: 632 -NLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFE--QALSKISPSVSELQ 688
L+G ++ + + + LT + QA +++ PSVSE +
Sbjct: 907 PQLTGADLYSLCSDAMTAALKRRVHDLEEGLEPGSSALMLTMEDLLQAAARLQPSVSEQE 966
Query: 689 IQRYKTLSETFKA 701
+ RYK + F A
Sbjct: 967 LLRYKRIQRKFAA 979
Score = 367 (134.2 bits), Expect = 1.6e-30, P = 1.6e-30
Identities = 84/222 (37%), Positives = 131/222 (59%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG++ V +E+ + +PL HP+L LG+R +G+LL+GPPG GKT LA A+A E
Sbjct: 704 WHDVGGLQEVKKEILETIQLPLEHPELLS-LGLR-RSGLLLHGPPGTGKTLLAKAVATEC 761
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQRE--M 240
+ F + E+++ G SEEN+R++F++A AP I+F DE+D++A R +
Sbjct: 762 SLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGV 821
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRF 300
R+V+QL+ +D H V VIGATNRPD +DPAL RPGRF
Sbjct: 822 MDRVVSQLLAELDGLHSTQD-----------------VFVIGATNRPDLLDPALLRPGRF 864
Query: 301 DREIVLGVPDENA-RVQILSVLTRNLRVEGSFDLVKIARSTP 341
D+ + +G ++ A ++++LS +TR ++E S LV + P
Sbjct: 865 DKLVFVGANEDRASQLRVLSAITRKFKLEPSVSLVNVLDCCP 906
Score = 172 (65.6 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 50/161 (31%), Positives = 73/161 (45%)
Query: 467 LLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCIL 526
LL GPPGCGKT + A + G + + + L + G E ++ +FSRAR C P +L
Sbjct: 467 LLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAIFSRARRCRPAVL 526
Query: 527 FFDEVDALTTKRGKEGGWV-VERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRP 585
VD L R G V +L LL+ D + + V+ T+R + V
Sbjct: 527 LLTAVDLLGRDRDGLGEDARVMAVLRHLLLNEDPLNSCPPLMVVATTSRAQDLPADVQTA 586
Query: 586 GRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 626
F L VP + +R IL AL P+ V+L +A+
Sbjct: 587 --FPHELEVPALSEGQRLSILRALTAHLPLGQEVNLAQLAR 625
Score = 148 (57.2 bits), Expect = 5.6e-68, Sum P(2) = 5.6e-68
Identities = 33/109 (30%), Positives = 58/109 (53%)
Query: 128 GMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVPFY 187
G+E+++ EL V+ P P G + +LL GPPGCGKT + A + G+
Sbjct: 437 GLEALVSEL-CAVLKPRLQPGGALLTGT---SSVLLRGPPGCGKTTVVAAACSHLGLHLL 492
Query: 188 KISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENL 236
K+ + + + SGA E ++ +FS+A R P+++ + +D + R+ L
Sbjct: 493 KVPCSSLCAESSGAVETKLQAIFSRARRCRPAVLLLTAVDLLGRDRDGL 541
>UNIPROTKB|E2RDF7 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0016561 "protein import
into peroxisome matrix, translocation" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0042623 GO:GO:0016561 KO:K13339 CTD:5190 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:AAEX03008332 RefSeq:XP_538926.2
Ensembl:ENSCAFT00000002738 GeneID:481805 KEGG:cfa:481805
NextBio:20856540 Uniprot:E2RDF7
Length = 980
Score = 581 (209.6 bits), Expect = 4.6e-67, Sum P(2) = 4.6e-67
Identities = 153/433 (35%), Positives = 233/433 (53%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
++V+ T++ + PA + F E+ + V E R+ +L LT +L + +L ++A
Sbjct: 567 LMVVATTSQAQDL-PADVQTA-FPHELEVPVLSEGQRLSVLQALTAHLPLGQEVNLTQLA 624
Query: 338 RSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMERL 397
R GFV RI + S L+G ++E+ + + P
Sbjct: 625 RRCAGFVVGDLYALLTHSSRVACTRI---KNSGLAGG-LSEEDEGELCAAGF-P------ 673
Query: 398 TITMTDFEEATKMVQPS-SRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
+ DF +A + +Q + S+ G IP+V W DVGGL ++ E I+ I+ P E+
Sbjct: 674 -LLAEDFGQALEQLQTAHSQAIGAPKIPSVSWHDVGGLQEVKKE----ILETIQLPLEHP 728
Query: 457 EF-GVDLE-TGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTL 514
E + L +G LL+GPPG GKTL+AKAVA E F+ +KGPEL+N YVG+SE VR +
Sbjct: 729 ELLSLGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREV 788
Query: 515 FSRARTCSPCILFFDEVDALTTKRGKEG--GWVVERLLNQLLIELDGADKRKGVFVIGAT 572
F+RAR +PCI+FFDE+D+L RG+ G G V++R+++QLL ELDG + VFVIGAT
Sbjct: 789 FARARAAAPCIIFFDELDSLAPSRGRNGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGAT 848
Query: 573 NRPDVMDRAVLRPGRFGKLLYVPLPTPDERGL-ILEALARKKPIDDSVDLHTIAQSKFCE 631
NRPD++D A+LRPGRF KL++V + L +L A+ RK ++ SV L + C
Sbjct: 849 NRPDLLDPALLRPGRFDKLVFVGVSEDRASQLRVLSAITRKFKLEPSVSLVNVLDR--CP 906
Query: 632 -NLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFE--QALSKISPSVSELQ 688
L+G ++ + + T+ LT + QA +++ PSVSE +
Sbjct: 907 PQLTGADLYSLCSDAMTTALKRRVRDLEEGLEPGSSTLLLTMDDLLQAAARLQPSVSEQE 966
Query: 689 IQRYKTLSETFKA 701
+ RYK + F A
Sbjct: 967 LLRYKRIQRKFAA 979
Score = 374 (136.7 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 94/266 (35%), Positives = 145/266 (54%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG++ V +E+ + +PL HP+L LG+R +G+LL+GPPG GKT LA A+A E
Sbjct: 704 WHDVGGLQEVKKEILETIQLPLEHPELLS-LGLR-RSGLLLHGPPGTGKTLLAKAVATEC 761
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR-ENLQRE-M 240
+ F + E+++ G SEEN+R++F++A AP I+F DE+D++A R N +
Sbjct: 762 SLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRNGDSGGV 821
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRF 300
R+V+QL+ +D H V VIGATNRPD +DPAL RPGRF
Sbjct: 822 MDRVVSQLLAELDGLHSTQD-----------------VFVIGATNRPDLLDPALLRPGRF 864
Query: 301 DREIVLGVPDENA-RVQILSVLTRNLRVEGSFDLVKIA-RSTPGFVXXXXXXXXXXXXXX 358
D+ + +GV ++ A ++++LS +TR ++E S LV + R P
Sbjct: 865 DKLVFVGVSEDRASQLRVLSAITRKFKLEPSVSLVNVLDRCPPQLTGADLYSLCSDAMTT 924
Query: 359 XMKRIIDQRKSELS-GNSIAEQHSDD 383
+KR + + L G+S DD
Sbjct: 925 ALKRRVRDLEEGLEPGSSTLLLTMDD 950
Score = 143 (55.4 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 48/162 (29%), Positives = 71/162 (43%)
Query: 467 LLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCIL 526
LL GPPG GKT A + G + + + L G E ++ FSRAR C P +L
Sbjct: 467 LLRGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSGAVEKKLQATFSRARRCRPVVL 526
Query: 527 FFDEVDALTTKRGK--EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLR 584
VD L R E VV L + LL + D + V+ T++ + V
Sbjct: 527 LLTAVDLLGRNRDGLGEDARVVATLCH-LLQDEDPLTSCPPLMVVATTSQAQDLPADVQT 585
Query: 585 PGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 626
F L VP+ + +R +L+AL P+ V+L +A+
Sbjct: 586 A--FPHELEVPVLSEGQRLSVLQALTAHLPLGQEVNLTQLAR 625
Score = 133 (51.9 bits), Expect = 4.6e-67, Sum P(2) = 4.6e-67
Identities = 36/123 (29%), Positives = 59/123 (47%)
Query: 133 LEELKMEVIVPLYHPQL-PQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVPFYKISA 191
LE L E+ L P+L P + + +LL GPPG GKT A + G+ K+
Sbjct: 438 LETLVTELCAAL-KPRLQPGGALLTGTSSVLLRGPPGSGKTTAVTAACSRLGLHLLKVPC 496
Query: 192 TEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIVTQLMTC 251
+ + + SGA E+ ++ FS+A R P ++ + +D + R+ L + R + T
Sbjct: 497 SSLCADSSGAVEKKLQATFSRARRCRPVVLLLTAVDLLGRNRDGLGEDA-RVVATLCHLL 555
Query: 252 MDE 254
DE
Sbjct: 556 QDE 558
>ZFIN|ZDB-GENE-081104-252 [details] [associations]
symbol:pex6 "peroxisomal biogenesis factor 6"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-081104-252
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074953
EMBL:CU469387 IPI:IPI00836958 Ensembl:ENSDART00000104613
Bgee:F1QMB0 Uniprot:F1QMB0
Length = 1071
Score = 613 (220.8 bits), Expect = 1.5e-66, Sum P(2) = 1.5e-66
Identities = 156/429 (36%), Positives = 238/429 (55%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
V+V+G+ + + + F ++ + E+ R +LS L+ +L + +L +IA
Sbjct: 658 VVVVGSVSSQHELPSDVM--AAFVHQVAIESLSEDQRRMVLSSLSEDLLLGKDVNLGRIA 715
Query: 338 RSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMERL 397
+ T GFV +R+++ E +++EQ +D + +
Sbjct: 716 KQTAGFVLGDLCALLTNAGKAAHRRLVETYFPE----AVSEQEEEDLC--------VSGV 763
Query: 398 TITMTDFEEATKMVQPS-SRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
++T DF A ++Q + S+ G IP V W+DVGGL ++ E I+ I+ P E+
Sbjct: 764 SVTSEDFSAALDVLQEAHSQAIGAPKIPAVSWQDVGGLQQVKKE----ILDTIQLPLEHP 819
Query: 457 EF-GVDLE-TGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTL 514
E + L +G LLYGPPG GKTL+AKAVA E F+ +KGPEL+N YVG+SE +R +
Sbjct: 820 ELLSLGLRRSGLLLYGPPGTGKTLLAKAVATECTMTFLSVKGPELINMYVGQSEENIRQV 879
Query: 515 FSRARTCSPCILFFDEVDALTTKRGKEG--GWVVERLLNQLLIELDGADKRKGVFVIGAT 572
S+AR+ +PCI+FFDE+D+L RG G G V++R+++QLL ELDG VFVIGAT
Sbjct: 880 SSKARSAAPCIIFFDELDSLAPNRGHSGDSGGVMDRVVSQLLAELDGLHSSGDVFVIGAT 939
Query: 573 NRPDVMDRAVLRPGRFGKLLYVPLPTPDERGL-ILEALARKKPIDDSVDLHTIAQSKFCE 631
NRPD++D+++LRPGRF KL+YV + E L +L+A+ RK +D SV L I +S C
Sbjct: 940 NRPDLLDQSLLRPGRFDKLVYVGINEDRESQLQVLKAILRKFKVDASVCLSDIVES--CP 997
Query: 632 -NLSGXXXXXXXXXXXXXXXXXKL--ISSKSSSDVTPFTIKLTHFEQALSKISPSVSELQ 688
L+G K+ I+ S+++ T+ F +ALS + PSVSE Q
Sbjct: 998 PRLTGADLYSLCSDAMMCAVKRKISRITEGVDSELSSLTLCSEDFSEALSGLQPSVSEQQ 1057
Query: 689 IQRYKTLSE 697
I RY+ L +
Sbjct: 1058 ISRYQLLQQ 1066
Score = 365 (133.5 bits), Expect = 3.2e-30, P = 3.2e-30
Identities = 87/222 (39%), Positives = 129/222 (58%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+QD+GG++ V +E+ + +PL HP+L LG+R +G+LLYGPPG GKT LA A+A E
Sbjct: 795 WQDVGGLQQVKKEILDTIQLPLEHPELLS-LGLR-RSGLLLYGPPGTGKTLLAKAVATEC 852
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQRE--M 240
+ F + E+++ G SEENIR + SKA AP I+F DE+D++A R + +
Sbjct: 853 TMTFLSVKGPELINMYVGQSEENIRQVSSKARSAAPCIIFFDELDSLAPNRGHSGDSGGV 912
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRF 300
R+V+QL+ +D H G V VIGATNRPD +D +L RPGRF
Sbjct: 913 MDRVVSQLLAELDGLH-----------------SSGDVFVIGATNRPDLLDQSLLRPGRF 955
Query: 301 DREIVLGV-PDENARVQILSVLTRNLRVEGSFDLVKIARSTP 341
D+ + +G+ D +++Q+L + R +V+ S L I S P
Sbjct: 956 DKLVYVGINEDRESQLQVLKAILRKFKVDASVCLSDIVESCP 997
Score = 98 (39.6 bits), Expect = 1.5e-66, Sum P(2) = 1.5e-66
Identities = 27/123 (21%), Positives = 53/123 (43%)
Query: 138 MEVIVPLYHPQLPQ-WLGVRPMAGILLYGPPGCGKTKLAHAIANETGVPFYKISATEVVS 196
+E ++ + P L + L ++ ILL GP G GK A++ + K+ + +
Sbjct: 538 VEKLITIIQPHLNESTLILKRGCSILLMGPNGSGKFTAVRAVSRRLHLHLIKVDCVTLCA 597
Query: 197 GVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIVTQLMTCMDESH 256
+ ASE I+ +F +A P ++ + + + R+ E + R+ L + H
Sbjct: 598 DTAAASEAKIKSVFERAELHHPCLLLLRNLQLLGQSRDGA--ETDCRVAATLCQLIAAVH 655
Query: 257 RLV 259
V
Sbjct: 656 TSV 658
>UNIPROTKB|A5GFQ7 [details] [associations]
symbol:PEX6 "Peroxisomal biogenesis factor 6" species:9823
"Sus scrofa" [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0006625 "protein targeting to peroxisome" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0050821 "protein
stabilization" evidence=ISS] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0016561 "protein import into peroxisome matrix, translocation"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005777 "peroxisome"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 GO:GO:0050821 GO:GO:0005777 GO:GO:0032403
GO:GO:0008022 eggNOG:COG0464 GO:GO:0042623 EMBL:CR956379
GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP
GeneTree:ENSGT00550000074953 RefSeq:NP_001103896.1
UniGene:Ssc.19314 ProteinModelPortal:A5GFQ7 STRING:A5GFQ7
Ensembl:ENSSSCT00000001838 GeneID:100126288 KEGG:ssc:100126288
ArrayExpress:A5GFQ7 Uniprot:A5GFQ7
Length = 969
Score = 570 (205.7 bits), Expect = 1.4e-65, Sum P(2) = 1.4e-65
Identities = 153/433 (35%), Positives = 230/433 (53%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
++V+ T+R + PA + F E+ + V E R+ IL LT +L + +L ++A
Sbjct: 556 LMVVATTSRAQDL-PADVQTA-FPHELEVPVLSEGQRLSILQALTAHLPLGQEVNLAQLA 613
Query: 338 RSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMERL 397
R GFV RI + S +G ++E+ + + P
Sbjct: 614 RRCAGFVVGDLYALLTHSSRAACTRI---KNSGWAGG-LSEEDEGELCAAGF-P------ 662
Query: 398 TITMTDFEEATKMVQPS-SRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
+ D +A + +Q + S+ G IP+V W DVGGL ++ E I+ I+ P E+
Sbjct: 663 -LLAEDLGQALEQLQSAHSQAVGAPKIPSVSWHDVGGLQEVKKE----ILETIQLPLEHP 717
Query: 457 EF-GVDLE-TGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTL 514
E + L +G LL+GPPG GKTL+AKAVA E F+ +KGPEL+N YVG+SE VR +
Sbjct: 718 ELLSLGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREV 777
Query: 515 FSRARTCSPCILFFDEVDALTTKRGKEG--GWVVERLLNQLLIELDGADKRKGVFVIGAT 572
F+RAR +PCI+FFDE+D+L RG+ G G V++R+++QLL ELDG + VFVIGAT
Sbjct: 778 FARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGAT 837
Query: 573 NRPDVMDRAVLRPGRFGKLLYVPLPTPDERGL-ILEALARKKPIDDSVDLHTIAQSKFCE 631
NRPD++D A+LRPGRF KL++V L +L A+ RK ++ SV L +A C
Sbjct: 838 NRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFRLEPSVSL--VAVLDHCP 895
Query: 632 -NLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFE--QALSKISPSVSELQ 688
L+G ++ + + + LT + QA +++ PSVSE +
Sbjct: 896 PQLTGADLYSLCADAMTAALKRRVRDLEDGLEPGSSALLLTMEDLLQAAARLQPSVSEHE 955
Query: 689 IQRYKTLSETFKA 701
+ RYK + F A
Sbjct: 956 LLRYKRIQRKFAA 968
Score = 370 (135.3 bits), Expect = 7.2e-31, P = 7.2e-31
Identities = 85/222 (38%), Positives = 131/222 (59%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG++ V +E+ + +PL HP+L LG+R +G+LL+GPPG GKT LA A+A E
Sbjct: 693 WHDVGGLQEVKKEILETIQLPLEHPELLS-LGLR-RSGLLLHGPPGTGKTLLAKAVATEC 750
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQRE--M 240
+ F + E+++ G SEEN+R++F++A AP I+F DE+D++A R +
Sbjct: 751 SLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGV 810
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRF 300
R+V+QL+ +D H V VIGATNRPD +DPAL RPGRF
Sbjct: 811 MDRVVSQLLAELDGLHSTQD-----------------VFVIGATNRPDLLDPALLRPGRF 853
Query: 301 DREIVLGVPDENA-RVQILSVLTRNLRVEGSFDLVKIARSTP 341
D+ + +G ++ A ++++LS +TR R+E S LV + P
Sbjct: 854 DKLVFVGASEDRASQLRVLSAITRKFRLEPSVSLVAVLDHCP 895
Score = 157 (60.3 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 49/161 (30%), Positives = 70/161 (43%)
Query: 467 LLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCIL 526
LL GPPG GKT A G + + + L G E ++ FSRAR C P +L
Sbjct: 456 LLRGPPGSGKTTAVTAACGRLGLHLLKVPCSSLCADSSGAVETKLQAAFSRARRCRPVVL 515
Query: 527 FFDEVDALTTKRGKEGGWV-VERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRP 585
VD L R G V L +LL++ D + V+ T+R + V
Sbjct: 516 LLTAVDLLGRDRDGLGEDARVVATLRRLLLDEDPLTSHPPLMVVATTSRAQDLPADVQTA 575
Query: 586 GRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 626
F L VP+ + +R IL+AL P+ V+L +A+
Sbjct: 576 --FPHELEVPVLSEGQRLSILQALTAHLPLGQEVNLAQLAR 614
Score = 130 (50.8 bits), Expect = 1.4e-65, Sum P(2) = 1.4e-65
Identities = 36/123 (29%), Positives = 57/123 (46%)
Query: 133 LEELKMEVIVPLYHPQL-PQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVPFYKISA 191
LE L E+ L P+L P + +LL GPPG GKT A G+ K+
Sbjct: 427 LETLVTELCAAL-KPRLQPGGALLTAPGSVLLRGPPGSGKTTAVTAACGRLGLHLLKVPC 485
Query: 192 TEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIVTQLMTC 251
+ + + SGA E ++ FS+A R P ++ + +D + R+ L + R + T
Sbjct: 486 SSLCADSSGAVETKLQAAFSRARRCRPVVLLLTAVDLLGRDRDGLGEDA-RVVATLRRLL 544
Query: 252 MDE 254
+DE
Sbjct: 545 LDE 547
>MGI|MGI:2385054 [details] [associations]
symbol:Pex6 "peroxisomal biogenesis factor 6" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005778 "peroxisomal
membrane" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006200 "ATP catabolic process" evidence=ISO] [GO:0006625
"protein targeting to peroxisome" evidence=ISO] [GO:0007031
"peroxisome organization" evidence=ISO] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0042623 "ATPase activity, coupled" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:2385054 GO:GO:0005829 GO:GO:0005524
GO:GO:0050821 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP EMBL:BC003424
EMBL:AY054409 IPI:IPI00116764 RefSeq:NP_663463.1 UniGene:Mm.299399
ProteinModelPortal:Q99LC9 SMR:Q99LC9 STRING:Q99LC9
PhosphoSite:Q99LC9 PaxDb:Q99LC9 PRIDE:Q99LC9
Ensembl:ENSMUST00000002840 GeneID:224824 KEGG:mmu:224824
GeneTree:ENSGT00550000074953 InParanoid:Q99LC9 NextBio:377397
Bgee:Q99LC9 CleanEx:MM_PEX6 Genevestigator:Q99LC9
GermOnline:ENSMUSG00000002763 Uniprot:Q99LC9
Length = 981
Score = 573 (206.8 bits), Expect = 3.2e-65, Sum P(2) = 3.2e-65
Identities = 152/433 (35%), Positives = 228/433 (52%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
++V+ T+R + ++ F E+ + V E R+ IL LT +L + +L ++A
Sbjct: 568 LMVVATTSRVQDLPTDVQTA--FPHELEVPVLSEAQRLSILQALTAHLPLGQEVNLPQLA 625
Query: 338 RSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMERL 397
R GFV RI R S +G ++E+ D +
Sbjct: 626 RRCAGFVVGDLYALLTHTCRAACTRI---RASGSAGG-LSEEDEGDLC--------VAGF 673
Query: 398 TITMTDFEEATKMVQPS-SRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
+ DF +A +Q + S+ G IP+V W DVGGL ++ E I+ I+ P E+
Sbjct: 674 PLLAEDFGQALDQLQTAHSQAVGAPRIPSVSWHDVGGLQDVKKE----ILETIQLPLEHP 729
Query: 457 EF-GVDLE-TGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTL 514
E + L +G LL+GPPG GKTL+AKAVA E F+ +KGPEL+N YVG+SE VR +
Sbjct: 730 ELLSLGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREV 789
Query: 515 FSRARTCSPCILFFDEVDALTTKRGKEG--GWVVERLLNQLLIELDGADKRKGVFVIGAT 572
F+RAR +PCI+FFDE+D+L RG+ G G V++R+++QLL ELDG + VFVIGAT
Sbjct: 790 FARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGAT 849
Query: 573 NRPDVMDRAVLRPGRFGKLLYVPLPTPDERGL-ILEALARKKPIDDSVDLHTIAQSKFCE 631
NRPD++D A+LRPGRF KL++V L +L A+ RK ++ SV L + C
Sbjct: 850 NRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLANVLDC--CP 907
Query: 632 -NLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFE--QALSKISPSVSELQ 688
L+G ++ + ++ + LT + QA +++ PSVSE +
Sbjct: 908 PQLTGADLYSLCSDAMMTALKRRVRDLEEGLELRSSALLLTMEDLLQAAARLQPSVSEQE 967
Query: 689 IQRYKTLSETFKA 701
+ RYK + F A
Sbjct: 968 LLRYKRIQRKFAA 980
Score = 366 (133.9 bits), Expect = 2.1e-30, P = 2.1e-30
Identities = 83/222 (37%), Positives = 130/222 (58%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG++ V +E+ + +PL HP+L LG+R +G+LL+GPPG GKT LA A+A E
Sbjct: 705 WHDVGGLQDVKKEILETIQLPLEHPELLS-LGLR-RSGLLLHGPPGTGKTLLAKAVATEC 762
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQRE--M 240
+ F + E+++ G SEEN+R++F++A AP I+F DE+D++A R +
Sbjct: 763 SLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGV 822
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRF 300
R+V+QL+ +D H V VIGATNRPD +DPAL RPGRF
Sbjct: 823 MDRVVSQLLAELDGLHSTQD-----------------VFVIGATNRPDLLDPALLRPGRF 865
Query: 301 DREIVLGVPDENA-RVQILSVLTRNLRVEGSFDLVKIARSTP 341
D+ + +G ++ A ++++LS +TR ++E S L + P
Sbjct: 866 DKLVFVGASEDRASQLRVLSAITRKFKLEASVSLANVLDCCP 907
Score = 155 (59.6 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 49/161 (30%), Positives = 70/161 (43%)
Query: 467 LLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCIL 526
LL GPPG GKT A + G + + + L E ++ FSRAR C P +L
Sbjct: 468 LLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRAVETKLQATFSRARRCRPAVL 527
Query: 527 FFDEVDALTTKRGKEGGWV-VERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRP 585
VD L R G V L LL++ D + + V+ T+R V D
Sbjct: 528 LLTAVDLLGRDRDGLGEDARVAATLRHLLLDEDALSRCPPLMVVATTSR--VQDLPTDVQ 585
Query: 586 GRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 626
F L VP+ + +R IL+AL P+ V+L +A+
Sbjct: 586 TAFPHELEVPVLSEAQRLSILQALTAHLPLGQEVNLPQLAR 626
Score = 124 (48.7 bits), Expect = 3.2e-65, Sum P(2) = 3.2e-65
Identities = 35/127 (27%), Positives = 62/127 (48%)
Query: 128 GMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVPFY 187
G+E+++ EL ++ P H Q P + + +LL GPPG GKT A + G+
Sbjct: 438 GLEALVNEL-CAILKP--HLQ-PGGTLLTGTSCVLLQGPPGSGKTTAVTAACSRLGLHLL 493
Query: 188 KISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIVTQ 247
K+ + + + S A E ++ FS+A R P+++ + +D + R+ L + R T
Sbjct: 494 KVPCSSLCADSSRAVETKLQATFSRARRCRPAVLLLTAVDLLGRDRDGLGEDA-RVAATL 552
Query: 248 LMTCMDE 254
+DE
Sbjct: 553 RHLLLDE 559
>UNIPROTKB|E1B8F6 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0016561 "protein import
into peroxisome matrix, translocation" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0042623 GO:GO:0016561 KO:K13339 CTD:5190 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:DAAA02055080 IPI:IPI00717630
RefSeq:NP_001179876.1 UniGene:Bt.44757 PRIDE:E1B8F6
Ensembl:ENSBTAT00000007275 GeneID:534944 KEGG:bta:534944
NextBio:20876581 Uniprot:E1B8F6
Length = 980
Score = 567 (204.7 bits), Expect = 3.4e-65, Sum P(2) = 3.4e-65
Identities = 152/433 (35%), Positives = 231/433 (53%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
++V+ T+R + PA + F E+ + V E R+ +L LT +L + +L ++A
Sbjct: 567 LMVVATTSRAQDL-PADVQTA-FPHELEVPVLAEAQRLSVLRALTAHLPLGQEVNLAQLA 624
Query: 338 RSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMERL 397
R GFV RI + S +G ++E+ + + P
Sbjct: 625 RRCAGFVVGDLFALLTHSSRAACTRI---KNSGWAGG-LSEEDEGELCAAGF-P------ 673
Query: 398 TITMTDFEEATKMVQPS-SRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
+ DF +A + +Q + S+ G IP+V W DVGGL ++ E I+ I+ P E+
Sbjct: 674 -LLAEDFGQALEQLQAAHSQAIGAPRIPSVSWHDVGGLQEVKKE----ILETIQLPLEHP 728
Query: 457 EF-GVDLE-TGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTL 514
E + L +G LL+GPPG GKTL+AKAVA E F+ +KGPEL+N YVG+SE VR +
Sbjct: 729 ELLSLGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREV 788
Query: 515 FSRARTCSPCILFFDEVDALTTKRGKEG--GWVVERLLNQLLIELDGADKRKGVFVIGAT 572
F+RAR +PCI+FFDE+D+L RG+ G G V++R+++QLL ELDG + VFVIGAT
Sbjct: 789 FARARAAAPCIIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGAT 848
Query: 573 NRPDVMDRAVLRPGRFGKLLYVPLPTPDERGL-ILEALARKKPIDDSVDLHTIAQSKFCE 631
NRPD++D A+LRPGRF KL++V + L +L A+ RK ++ SV L + C
Sbjct: 849 NRPDLLDPALLRPGRFDKLVFVGVNEDRASQLRVLSAITRKFRLEPSVSLVDVLDH--CP 906
Query: 632 -NLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFE--QALSKISPSVSELQ 688
L+G ++ + + + LT + QA +++ PSVSE +
Sbjct: 907 PQLTGADLYSLCSDAMTAALKRRVRDLEEGLEPGSSALLLTMEDLLQAAARLQPSVSEQE 966
Query: 689 IQRYKTLSETFKA 701
+ RYK + F A
Sbjct: 967 LLRYKRIQRKFAA 979
Score = 373 (136.4 bits), Expect = 3.4e-31, P = 3.4e-31
Identities = 86/222 (38%), Positives = 132/222 (59%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG++ V +E+ + +PL HP+L LG+R +G+LL+GPPG GKT LA A+A E
Sbjct: 704 WHDVGGLQEVKKEILETIQLPLEHPELLS-LGLR-RSGLLLHGPPGTGKTLLAKAVATEC 761
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQRE--M 240
+ F + E+++ G SEEN+R++F++A AP I+F DE+D++A R +
Sbjct: 762 SLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPNRGRSGDSGGV 821
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRF 300
R+V+QL+ +D H V VIGATNRPD +DPAL RPGRF
Sbjct: 822 MDRVVSQLLAELDGLHSTQD-----------------VFVIGATNRPDLLDPALLRPGRF 864
Query: 301 DREIVLGVPDENA-RVQILSVLTRNLRVEGSFDLVKIARSTP 341
D+ + +GV ++ A ++++LS +TR R+E S LV + P
Sbjct: 865 DKLVFVGVNEDRASQLRVLSAITRKFRLEPSVSLVDVLDHCP 906
Score = 149 (57.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 50/165 (30%), Positives = 70/165 (42%)
Query: 464 TG-FLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCS 522
TG LL GPPG GKT A + G + + + L G E ++ FSRAR C
Sbjct: 463 TGSVLLRGPPGSGKTTAVAAACSRLGLHLLKVPCSSLCADSSGAVETKLQAAFSRARRCR 522
Query: 523 PCILFFDEVDALTTKRGKEGGWV-VERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRA 581
P +L VD L R G V L LL++ D + V+ T+R +
Sbjct: 523 PVVLLLTAVDLLGRDRDGLGEDARVVATLRHLLLDEDPLASCPPLMVVATTSRAQDLPAD 582
Query: 582 VLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 626
V F L VP+ +R +L AL P+ V+L +A+
Sbjct: 583 VQTA--FPHELEVPVLAEAQRLSVLRALTAHLPLGQEVNLAQLAR 625
Score = 130 (50.8 bits), Expect = 3.4e-65, Sum P(2) = 3.4e-65
Identities = 36/123 (29%), Positives = 58/123 (47%)
Query: 133 LEELKMEVIVPLYHPQL-PQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVPFYKISA 191
LE L E+ L P+L P + +LL GPPG GKT A + G+ K+
Sbjct: 438 LEALVTELCTAL-KPRLQPGGALLTGTGSVLLRGPPGSGKTTAVAAACSRLGLHLLKVPC 496
Query: 192 TEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIVTQLMTC 251
+ + + SGA E ++ FS+A R P ++ + +D + R+ L + R + T
Sbjct: 497 SSLCADSSGAVETKLQAAFSRARRCRPVVLLLTAVDLLGRDRDGLGEDA-RVVATLRHLL 555
Query: 252 MDE 254
+DE
Sbjct: 556 LDE 558
>UNIPROTKB|Q9BVQ7 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
GO:GO:0017111 EMBL:AC025580 HOVERGEN:HBG001226 CTD:79029
OMA:TWEQIGG OrthoDB:EOG42RD70 EMBL:AK022348 EMBL:AK023232
EMBL:AK291457 EMBL:AC090527 EMBL:BC000981 IPI:IPI00031608
IPI:IPI00386906 IPI:IPI00890778 RefSeq:NP_076968.2
UniGene:Hs.369657 ProteinModelPortal:Q9BVQ7 SMR:Q9BVQ7
STRING:Q9BVQ7 PhosphoSite:Q9BVQ7 DMDM:292495038 PaxDb:Q9BVQ7
PRIDE:Q9BVQ7 Ensembl:ENST00000305560 Ensembl:ENST00000531970
Ensembl:ENST00000559860 GeneID:79029 KEGG:hsa:79029 UCSC:uc001zve.3
GeneCards:GC15P045694 H-InvDB:HIX0012209 HGNC:HGNC:28762
HPA:HPA043679 neXtProt:NX_Q9BVQ7 PharmGKB:PA134923477
InParanoid:Q9BVQ7 PhylomeDB:Q9BVQ7 GenomeRNAi:79029 NextBio:67739
Bgee:Q9BVQ7 CleanEx:HS_SPATA5L1 Genevestigator:Q9BVQ7
Uniprot:Q9BVQ7
Length = 753
Score = 342 (125.4 bits), Expect = 5.5e-28, P = 5.5e-28
Identities = 78/199 (39%), Positives = 110/199 (55%)
Query: 431 VGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGAN 490
+GGL + +++P G+ + G LL GPPG GKT + +AVA EAGA
Sbjct: 202 LGGLSEAADSLRELLRLPLRYPRALTALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 261
Query: 491 FIHIKGPELLNKYVGESELAVRTLFSRARTCS---PCILFFDEVDALTTKRGKEGGWVVE 547
+ + P L GE+E VR +F RAR + P +LF DE+DAL +RG
Sbjct: 262 LLAVSAPALQGSRPGETEENVRRVFQRARELASRGPSLLFLDEMDALCPQRGSRAP--ES 319
Query: 548 RLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILE 607
R++ Q+L LDGA + V V+GATNRPD +D A+ RPGRF + + + PT +R IL+
Sbjct: 320 RVVAQVLTLLDGASGDREVVVVGATNRPDALDPALRRPGRFDREVVIGTPTLKQRKEILQ 379
Query: 608 ALARKKPIDDSVDLHTIAQ 626
+ K PI VDL +A+
Sbjct: 380 VITSKMPISSHVDLGLLAE 398
Score = 314 (115.6 bits), Expect = 7.3e-25, P = 7.3e-25
Identities = 72/222 (32%), Positives = 116/222 (52%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++++GG+E V +LK + PL P +G+ G+LLYGPPGC KT L A+A
Sbjct: 463 WEEIGGLEDVKLKLKQSIEWPLKFPWEFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSC 522
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQR--EM 240
F +S ++ S G SE+ + +F +A + P+I+F+DEID+I R + ++
Sbjct: 523 HCSFVSVSGADLFSPFVGDSEKVLSQIFRQARASTPAILFLDEIDSILGARSASKTGCDV 582
Query: 241 ERRIVTQLMTCMDES--HRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPG 298
+ R+++ L+ +D + + G V++I ATNRPD +D AL RPG
Sbjct: 583 QERVLSVLLNELDGVGLKTIERRGSKSSQQEFQEVFNRSVMIIAATNRPDVLDTALLRPG 642
Query: 299 RFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARST 340
R D+ I + PD R+ IL V T+ + + L +A T
Sbjct: 643 RLDKIIYIPPPDHKGRLSILKVCTKTMPIGPDVSLENLAAET 684
Score = 312 (114.9 bits), Expect = 3.7e-64, Sum P(3) = 3.7e-64
Identities = 67/161 (41%), Positives = 97/161 (60%)
Query: 403 DFEEATKMVQPSSRRE--GFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGV 460
DF EA K +QPSS R G I V WE++GGL+ ++ + + I +KFP E+ G+
Sbjct: 436 DFLEAFKNIQPSSFRSVIGLMDIKPVDWEEIGGLEDVKLKLKQSIEWPLKFPWEFVRMGL 495
Query: 461 DLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRART 520
G LLYGPPGC KT + +A+A +F+ + G +L + +VG+SE + +F +AR
Sbjct: 496 TQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVLSQIFRQARA 555
Query: 521 CSPCILFFDEVDALTTKRG--KEGGWVVERLLNQLLIELDG 559
+P ILF DE+D++ R K G V ER+L+ LL ELDG
Sbjct: 556 STPAILFLDEIDSILGARSASKTGCDVQERVLSVLLNELDG 596
Score = 302 (111.4 bits), Expect = 3.7e-64, Sum P(3) = 3.7e-64
Identities = 78/219 (35%), Positives = 112/219 (51%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVP 185
LGG+ + L+ + +PL +P+ LG+ G+LL GPPG GKT+L A+A E G
Sbjct: 202 LGGLSEAADSLRELLRLPLRYPRALTALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 261
Query: 186 FYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIV 245
+SA + G +EEN+R +F +A A + +D EM+ +
Sbjct: 262 LLAVSAPALQGSRPGETEENVRRVFQRARELASRGPSLLFLD-----------EMDA-LC 309
Query: 246 TQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDREIV 305
Q + ES + Q V+V+GATNRPDA+DPALRRPGRFDRE+V
Sbjct: 310 PQRGSRAPESRVVAQ----VLTLLDGASGDREVVVVGATNRPDALDPALRRPGRFDREVV 365
Query: 306 LGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFV 344
+G P R +IL V+T + + DL +A T G+V
Sbjct: 366 IGTPTLKQRKEILQVITSKMPISSHVDLGLLAEMTVGYV 404
Score = 163 (62.4 bits), Expect = 3.7e-64, Sum P(3) = 3.7e-64
Identities = 44/132 (33%), Positives = 65/132 (49%)
Query: 564 KGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHT 623
+ V +I ATNRPDV+D A+LRPGR K++Y+P P R IL+ + PI V L
Sbjct: 620 RSVMIIAATNRPDVLDTALLRPGRLDKIIYIPPPDHKGRLSILKVCTKTMPIGPDVSLEN 679
Query: 624 IAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPS 683
+A ++ C SG L ++ D T T+K HF ++L + PS
Sbjct: 680 LA-AETCF-FSGADLRNLCTEAAL------LALQENGLDAT--TVKQEHFLKSLKTVKPS 729
Query: 684 VSELQIQRYKTL 695
+S + Y+ L
Sbjct: 730 LSCKDLALYENL 741
>RGD|621637 [details] [associations]
symbol:Pex6 "peroxisomal biogenesis factor 6" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005778 "peroxisomal membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0006200 "ATP catabolic
process" evidence=ISO] [GO:0006625 "protein targeting to
peroxisome" evidence=ISO] [GO:0007031 "peroxisome organization"
evidence=ISO;IMP] [GO:0008022 "protein C-terminus binding"
evidence=IEA;ISO] [GO:0016561 "protein import into peroxisome
matrix, translocation" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IEA;ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA;ISO] [GO:0050821 "protein stabilization"
evidence=IEA;ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621637 GO:GO:0005524 GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464
GO:GO:0017111 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660
IPI:IPI00188277 RefSeq:NP_476466.1 UniGene:Rn.10675
ProteinModelPortal:P54777 STRING:P54777 PRIDE:P54777 GeneID:117265
KEGG:rno:117265 UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
Length = 978
Score = 564 (203.6 bits), Expect = 5.0e-64, Sum P(2) = 5.0e-64
Identities = 148/431 (34%), Positives = 226/431 (52%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
++V+ T+R + +R F E+ + V E+ R+ +L LT +L + +L ++A
Sbjct: 567 LMVVATTSRVQDLPTDVRTA--FPHELEVPVLSESQRLSVLQALTAHLPLGQEVNLSQLA 624
Query: 338 RSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMERL 397
R GFV RI + +G +++E+ + + P
Sbjct: 625 RRCAGFVVGDLYALLTHASRAACTRI------KAAGLAMSEEDEGELCAAGF-P------ 671
Query: 398 TITMTDFEEATKMVQPS-SRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
+ DF +A +Q + S+ G IP+V W DVGGL ++ E I ++ PE
Sbjct: 672 -LLAEDFGQALDQLQTAHSQAVGAPKIPSVSWHDVGGLQDVKKEILETIQLPLEHPELLS 730
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
G+ +G LL+GPPG GKTL+AKAVA E F+ +KGPEL+N YVG+SE VR +F+
Sbjct: 731 -LGLR-RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFA 788
Query: 517 RARTCSPCILFFDEVDALTTKRGKEG--GWVVERLLNQLLIELDGADKRKGVFVIGATNR 574
RAR +PCI+FFDE+D+L RG+ G G V++R+++QLL ELDG + VFVIGATNR
Sbjct: 789 RARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNR 848
Query: 575 PDVMDRAVLRPGRFGKLLYVPLPTPDERGL-ILEALARKKPIDDSVDLHTIAQSKFCE-N 632
PD++D A+LRPGRF KL++V L +L A+ RK ++ SV L + C
Sbjct: 849 PDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLMNVLDC--CPPQ 906
Query: 633 LSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFE--QALSKISPSVSELQIQ 690
L+G ++ + + + LT + QA +++ PSVSE ++
Sbjct: 907 LTGADLYSLCSDAMMTALKRRVRDLEEGLEPRSSALLLTMEDLLQAAARLQPSVSEQELL 966
Query: 691 RYKTLSETFKA 701
RYK + F A
Sbjct: 967 RYKRIQRKFAA 977
Score = 367 (134.2 bits), Expect = 1.6e-30, P = 1.6e-30
Identities = 83/222 (37%), Positives = 131/222 (59%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG++ V +E+ + +PL HP+L LG+R +G+LL+GPPG GKT LA A+A E
Sbjct: 702 WHDVGGLQDVKKEILETIQLPLEHPELLS-LGLR-RSGLLLHGPPGTGKTLLAKAVATEC 759
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQRE--M 240
+ F + E+++ G SEEN+R++F++A AP I+F DE+D++A R +
Sbjct: 760 SLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGV 819
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRF 300
R+V+QL+ +D H V VIGATNRPD +DPAL RPGRF
Sbjct: 820 MDRVVSQLLAELDGLHSTQD-----------------VFVIGATNRPDLLDPALLRPGRF 862
Query: 301 DREIVLGVPDENA-RVQILSVLTRNLRVEGSFDLVKIARSTP 341
D+ + +G ++ A ++++LS +TR ++E S L+ + P
Sbjct: 863 DKLVFVGASEDRASQLRVLSAITRKFKLEASVSLMNVLDCCP 904
Score = 154 (59.3 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 48/161 (29%), Positives = 71/161 (44%)
Query: 467 LLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCIL 526
LL GPPG GKT A + G + + + L E ++T FSRAR C P +L
Sbjct: 467 LLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRPVVL 526
Query: 527 FFDEVDALTTKRGKEGGWV-VERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRP 585
+D L R G V L LL++ D + + V+ T+R V D
Sbjct: 527 LLTALDLLGRDRDGLGEDARVVATLRHLLLDEDPLSRCPPLMVVATTSR--VQDLPTDVR 584
Query: 586 GRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 626
F L VP+ + +R +L+AL P+ V+L +A+
Sbjct: 585 TAFPHELEVPVLSESQRLSVLQALTAHLPLGQEVNLSQLAR 625
Score = 122 (48.0 bits), Expect = 5.0e-64, Sum P(2) = 5.0e-64
Identities = 35/127 (27%), Positives = 61/127 (48%)
Query: 128 GMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVPFY 187
G+E+++ EL V+ P H Q P + + +LL GPPG GKT A + G+
Sbjct: 437 GLEALVNEL-CAVLKP--HLQ-PGGTLLTGTSCVLLQGPPGSGKTTAVTAACSRLGLHLL 492
Query: 188 KISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIVTQ 247
K+ + + + S E ++ FS+A R P ++ + +D + R+ L + R + T
Sbjct: 493 KVPCSSLCADSSRTVETKLQTTFSRARRCRPVVLLLTALDLLGRDRDGLGEDA-RVVATL 551
Query: 248 LMTCMDE 254
+DE
Sbjct: 552 RHLLLDE 558
>UNIPROTKB|P54777 [details] [associations]
symbol:Pex6 "Peroxisome assembly factor 2" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0016561 "protein import into peroxisome
matrix, translocation" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0050821 "protein stabilization" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:621637 GO:GO:0005524
GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464 GO:GO:0017111
HOGENOM:HOG000241031 KO:K13339 CTD:5190 HOVERGEN:HBG002311
OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660 IPI:IPI00188277
RefSeq:NP_476466.1 UniGene:Rn.10675 ProteinModelPortal:P54777
STRING:P54777 PRIDE:P54777 GeneID:117265 KEGG:rno:117265
UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
Length = 978
Score = 564 (203.6 bits), Expect = 5.0e-64, Sum P(2) = 5.0e-64
Identities = 148/431 (34%), Positives = 226/431 (52%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
++V+ T+R + +R F E+ + V E+ R+ +L LT +L + +L ++A
Sbjct: 567 LMVVATTSRVQDLPTDVRTA--FPHELEVPVLSESQRLSVLQALTAHLPLGQEVNLSQLA 624
Query: 338 RSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMERL 397
R GFV RI + +G +++E+ + + P
Sbjct: 625 RRCAGFVVGDLYALLTHASRAACTRI------KAAGLAMSEEDEGELCAAGF-P------ 671
Query: 398 TITMTDFEEATKMVQPS-SRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
+ DF +A +Q + S+ G IP+V W DVGGL ++ E I ++ PE
Sbjct: 672 -LLAEDFGQALDQLQTAHSQAVGAPKIPSVSWHDVGGLQDVKKEILETIQLPLEHPELLS 730
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
G+ +G LL+GPPG GKTL+AKAVA E F+ +KGPEL+N YVG+SE VR +F+
Sbjct: 731 -LGLR-RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFA 788
Query: 517 RARTCSPCILFFDEVDALTTKRGKEG--GWVVERLLNQLLIELDGADKRKGVFVIGATNR 574
RAR +PCI+FFDE+D+L RG+ G G V++R+++QLL ELDG + VFVIGATNR
Sbjct: 789 RARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNR 848
Query: 575 PDVMDRAVLRPGRFGKLLYVPLPTPDERGL-ILEALARKKPIDDSVDLHTIAQSKFCE-N 632
PD++D A+LRPGRF KL++V L +L A+ RK ++ SV L + C
Sbjct: 849 PDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLMNVLDC--CPPQ 906
Query: 633 LSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFE--QALSKISPSVSELQIQ 690
L+G ++ + + + LT + QA +++ PSVSE ++
Sbjct: 907 LTGADLYSLCSDAMMTALKRRVRDLEEGLEPRSSALLLTMEDLLQAAARLQPSVSEQELL 966
Query: 691 RYKTLSETFKA 701
RYK + F A
Sbjct: 967 RYKRIQRKFAA 977
Score = 367 (134.2 bits), Expect = 1.6e-30, P = 1.6e-30
Identities = 83/222 (37%), Positives = 131/222 (59%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG++ V +E+ + +PL HP+L LG+R +G+LL+GPPG GKT LA A+A E
Sbjct: 702 WHDVGGLQDVKKEILETIQLPLEHPELLS-LGLR-RSGLLLHGPPGTGKTLLAKAVATEC 759
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQRE--M 240
+ F + E+++ G SEEN+R++F++A AP I+F DE+D++A R +
Sbjct: 760 SLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGV 819
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRF 300
R+V+QL+ +D H V VIGATNRPD +DPAL RPGRF
Sbjct: 820 MDRVVSQLLAELDGLHSTQD-----------------VFVIGATNRPDLLDPALLRPGRF 862
Query: 301 DREIVLGVPDENA-RVQILSVLTRNLRVEGSFDLVKIARSTP 341
D+ + +G ++ A ++++LS +TR ++E S L+ + P
Sbjct: 863 DKLVFVGASEDRASQLRVLSAITRKFKLEASVSLMNVLDCCP 904
Score = 154 (59.3 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 48/161 (29%), Positives = 71/161 (44%)
Query: 467 LLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCIL 526
LL GPPG GKT A + G + + + L E ++T FSRAR C P +L
Sbjct: 467 LLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRPVVL 526
Query: 527 FFDEVDALTTKRGKEGGWV-VERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRP 585
+D L R G V L LL++ D + + V+ T+R V D
Sbjct: 527 LLTALDLLGRDRDGLGEDARVVATLRHLLLDEDPLSRCPPLMVVATTSR--VQDLPTDVR 584
Query: 586 GRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 626
F L VP+ + +R +L+AL P+ V+L +A+
Sbjct: 585 TAFPHELEVPVLSESQRLSVLQALTAHLPLGQEVNLSQLAR 625
Score = 122 (48.0 bits), Expect = 5.0e-64, Sum P(2) = 5.0e-64
Identities = 35/127 (27%), Positives = 61/127 (48%)
Query: 128 GMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVPFY 187
G+E+++ EL V+ P H Q P + + +LL GPPG GKT A + G+
Sbjct: 437 GLEALVNEL-CAVLKP--HLQ-PGGTLLTGTSCVLLQGPPGSGKTTAVTAACSRLGLHLL 492
Query: 188 KISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIVTQ 247
K+ + + + S E ++ FS+A R P ++ + +D + R+ L + R + T
Sbjct: 493 KVPCSSLCADSSRTVETKLQTTFSRARRCRPVVLLLTALDLLGRDRDGLGEDA-RVVATL 551
Query: 248 LMTCMDE 254
+DE
Sbjct: 552 RHLLLDE 558
>WB|WBGene00010562 [details] [associations]
symbol:cdc-48.3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0007091
"metaphase/anaphase transition of mitotic cell cycle" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007067 "mitosis" evidence=IMP] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006469 "negative regulation of protein kinase activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0007052
GO:GO:0002119 GO:GO:0006469 GO:GO:0000003 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 HOGENOM:HOG000223225 GeneTree:ENSGT00700000104502
GO:GO:0007091 EMBL:Z75712 KO:K13525 PIR:T23322 RefSeq:NP_492211.1
ProteinModelPortal:Q21222 SMR:Q21222 PaxDb:Q21222
EnsemblMetazoa:K04G2.3 GeneID:172586 KEGG:cel:CELE_K04G2.3
UCSC:K04G2.3 CTD:172586 WormBase:K04G2.3 InParanoid:Q21222
OMA:QVAPTIV NextBio:876139 Uniprot:Q21222
Length = 724
Score = 572 (206.4 bits), Expect = 6.2e-64, Sum P(3) = 6.2e-64
Identities = 126/297 (42%), Positives = 175/297 (58%)
Query: 406 EATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETG 465
+A K ++P+ R+ +PNV W D+GG + L+ E + ++ K PE +E FG+D G
Sbjct: 436 DARKRIRPTGIRQFILEVPNVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAG 495
Query: 466 FLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCI 525
LLYGPPGC KTLIA+A+A+EA NF+ +KGPEL +K+VG+SE A+R LFSRAR +P I
Sbjct: 496 ILLYGPPGCSKTLIARALASEAKMNFLAVKGPELFSKWVGDSEKAIRDLFSRARQVAPTI 555
Query: 526 LFFDEVDALTTKRGKE-GGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLR 584
+FFDE+DA+ + RG E V +R+L QLL ELDG +K V ++ ATNRPD +D A+LR
Sbjct: 556 VFFDEIDAVGSSRGSEKSSGVSDRVLAQLLTELDGLEKSSRVILLAATNRPDQLDSALLR 615
Query: 585 PGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXX 644
PGR + +YV LP R ILE +K DD+V TI K E SG
Sbjct: 616 PGRLDRAIYVGLPCEVTRRAILEMRTKKMKFDDTV--RTI--DKLVEKTSGYSGAELVAV 671
Query: 645 XXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETFKA 701
+ + + S D T ++ THFEQAL+ + ++ Y + FKA
Sbjct: 672 CRTAA----MFAMRESIDAT--IVQWTHFEQALAAVVSRTEAYLLEIY----DDFKA 718
Score = 371 (135.7 bits), Expect = 2.7e-31, P = 2.7e-31
Identities = 89/245 (36%), Positives = 133/245 (54%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG E + E++ VI P HP+ + G+ P AGILLYGPPGC KT +A A+A+E
Sbjct: 458 WNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLYGPPGCSKTLIARALASEA 517
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQRE-ME 241
+ F + E+ S G SE+ IRDLFS+A + AP+IVF DEIDA+ S R + + +
Sbjct: 518 KMNFLAVKGPELFSKWVGDSEKAIRDLFSRARQVAPTIVFFDEIDAVGSSRGSEKSSGVS 577
Query: 242 RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFD 301
R++ QL+T +D + + V+++ ATNRPD +D AL RPGR D
Sbjct: 578 DRVLAQLLTELDGLEKSSR-----------------VILLAATNRPDQLDSALLRPGRLD 620
Query: 302 REIVLGVPDENARVQILSVLTRNLRVEGSFDLV-KIARSTPGFVXXXXXXXXXXXXXXXM 360
R I +G+P E R IL + T+ ++ + + + K+ T G+ M
Sbjct: 621 RAIYVGLPCEVTRRAILEMRTKKMKFDDTVRTIDKLVEKTSGYSGAELVAVCRTAAMFAM 680
Query: 361 KRIID 365
+ ID
Sbjct: 681 RESID 685
Score = 60 (26.2 bits), Expect = 6.2e-64, Sum P(3) = 6.2e-64
Identities = 23/83 (27%), Positives = 40/83 (48%)
Query: 125 DLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE-TG 183
++GG + + L+ VI P+ + P +L++G PG GKT L +A +G
Sbjct: 247 NIGGCFTAKQVLEDYVISPVRQKESP--------CSVLIWGLPGSGKTLLLKEVALVLSG 298
Query: 184 VPFYKISATEVVSGVSGASEENI 206
Y I + E + ++G + NI
Sbjct: 299 STTY-IGSCEELMELNGVTTGNI 320
Score = 50 (22.7 bits), Expect = 6.2e-64, Sum P(3) = 6.2e-64
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 299 RFDREIVLGVPDENARVQILSVLTR--NLRVEGSFDLVKIARSTPGF 343
RF E + VP ++ R+ ILS + N +E D +AR T GF
Sbjct: 367 RFPIEAEITVPTQDERLDILSKIGNIYNFPLELHLD---VARHTHGF 410
>SGD|S000005273 [details] [associations]
symbol:PEX6 "AAA-peroxin" species:4932 "Saccharomyces
cerevisiae" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS;IMP] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=IEA;IMP;IDA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IMP;IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0016562
"protein import into peroxisome matrix, receptor recycling"
evidence=IGI;IDA;IMP] [GO:0001302 "replicative cell aging"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005273 GO:GO:0005829 GO:GO:0005524 GO:GO:0005777
EMBL:X83226 EMBL:BK006947 GO:GO:0001302 GO:GO:0016887 GO:GO:0005778
GO:GO:0046982 eggNOG:COG0464 EMBL:Z46259 GO:GO:0016562 KO:K13339
GeneTree:ENSGT00550000074953 OrthoDB:EOG48PQTF EMBL:L20789
EMBL:Z71605 PIR:S43211 RefSeq:NP_014070.1 ProteinModelPortal:P33760
SMR:P33760 DIP:DIP-2621N IntAct:P33760 MINT:MINT-423224
STRING:P33760 PaxDb:P33760 PeptideAtlas:P33760 EnsemblFungi:YNL329C
GeneID:855387 KEGG:sce:YNL329C CYGD:YNL329c HOGENOM:HOG000248247
OMA:FTGADFY NextBio:979190 ArrayExpress:P33760
Genevestigator:P33760 GermOnline:YNL329C Uniprot:P33760
Length = 1030
Score = 585 (211.0 bits), Expect = 7.1e-63, Sum P(3) = 7.1e-63
Identities = 144/368 (39%), Positives = 202/368 (54%)
Query: 275 PGYVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLV 334
PG V G+ N D V + R RF EI++ VP E R++I + +
Sbjct: 588 PGTTFV-GSVNNIDNVPSSFRSHMRF--EILVPVPSEAQRLRIFQWYLSSHELNRDVQQ- 643
Query: 335 KIARSTPGFVXXXXXXXXXXXXX-XXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEE 393
K+ S + +K I++ + + E + WLP+
Sbjct: 644 KVPVSYMDNISFSSLSSYSAGLTPLDIKSIVETARMTATARFYQESK-----KCGWLPQS 698
Query: 394 MERLTITMTDFEEATKMVQPS-SRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFP 452
+ IT D +AT + S G IPNV W+D+GG+D+++ E I +K P
Sbjct: 699 ---ILITQEDLSKATSKARNEFSVSIGAPQIPNVTWDDIGGIDFVKGEILDTIDMPLKHP 755
Query: 453 EEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVR 512
E + G+ +G L YGPPG GKTL+AKA+A NF +KGPELLN Y+GESE VR
Sbjct: 756 ELFTS-GMKKRSGILFYGPPGTGKTLMAKAIATNFSLNFFSVKGPELLNMYIGESEANVR 814
Query: 513 TLFSRARTCSPCILFFDEVDALTTKRGKEG--GWVVERLLNQLLIELDG-ADKRKGVFVI 569
+F +AR PC++FFDE+D++ KRG +G G V++R+++QLL ELDG + GVFVI
Sbjct: 815 RVFQKAREAKPCVIFFDEIDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSTDADGVFVI 874
Query: 570 GATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGL-ILEALARKKPIDDSVDLHTIAQSK 628
GATNRPD++D A+LRPGRF KLLY+ +P D + L ILEAL RK +D+ V L +A K
Sbjct: 875 GATNRPDLLDEALLRPGRFDKLLYLGIPDTDTKQLNILEALTRKFVLDNDVKLIELA--K 932
Query: 629 FCE-NLSG 635
C N +G
Sbjct: 933 LCPFNYTG 940
Score = 383 (139.9 bits), Expect = 5.2e-34, Sum P(2) = 5.2e-34
Identities = 103/307 (33%), Positives = 160/307 (52%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG++ V E+ + +PL HP+L G++ +GIL YGPPG GKT +A AIA
Sbjct: 731 WDDIGGIDFVKGEILDTIDMPLKHPELFT-SGMKKRSGILFYGPPGTGKTLMAKAIATNF 789
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQRE--M 240
+ F+ + E+++ G SE N+R +F KA P ++F DEID++A KR N +
Sbjct: 790 SLNFFSVKGPELLNMYIGESEANVRRVFQKAREAKPCVIFFDEIDSVAPKRGNQGDSGGV 849
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRF 300
RIV+QL+ +D G V VIGATNRPD +D AL RPGRF
Sbjct: 850 MDRIVSQLLAELD---------------GMSTDADG-VFVIGATNRPDLLDEALLRPGRF 893
Query: 301 DREIVLGVPDENAR-VQILSVLTRNLRVEGSFDLVKIARSTP-GFVXXXXXXXXXXXXXX 358
D+ + LG+PD + + + IL LTR ++ L+++A+ P +
Sbjct: 894 DKLLYLGIPDTDTKQLNILEALTRKFVLDNDVKLIELAKLCPFNYTGADFYALCSDAMLN 953
Query: 359 XMKRI---IDQRKS---ELSGNSIAEQHSDDWWRQPWLPEEMERLTITMTDFEEATKMVQ 412
M RI ++++ S EL+G +I+ + W +E ++ + M DF +A + +
Sbjct: 954 AMSRIARMVEKKVSQHNELTGENISTRR----WFDKIATKEDTKVVVKMEDFLKAQEQLT 1009
Query: 413 PS-SRRE 418
PS SR E
Sbjct: 1010 PSVSRAE 1016
Score = 62 (26.9 bits), Expect = 7.1e-63, Sum P(3) = 7.1e-63
Identities = 11/44 (25%), Positives = 25/44 (56%)
Query: 659 SSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETFKAA 702
++ + T +K+ F +A +++PSVS ++ Y+ + F+ A
Sbjct: 987 ATKEDTKVVVKMEDFLKAQEQLTPSVSRAELNHYEAVRANFEGA 1030
Score = 49 (22.3 bits), Expect = 7.1e-63, Sum P(3) = 7.1e-63
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 164 YGPPGCGKTKLAHAIANETGVPFYKI 189
YGP GC K+ H + +++ +PF I
Sbjct: 43 YGP-GCTPGKIVHCVLDDS-LPFCSI 66
>UNIPROTKB|F1SN45 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:CU457441 Ensembl:ENSSSCT00000005157 Uniprot:F1SN45
Length = 755
Score = 339 (124.4 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 80/216 (37%), Positives = 115/216 (53%)
Query: 419 GFSAIPNVKWED-----VGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPG 473
G S +P + E +GGL + + +P + G+ + G LL GPPG
Sbjct: 185 GLSGVPPSESEPPPEVPLGGLAEAADSLRELLRLPLLYPRSFASLGLAVPRGVLLAGPPG 244
Query: 474 CGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCS---PCILFFDE 530
GKT + +AVA EAGA + + P L GE+E VR +F RA+ + P +LF DE
Sbjct: 245 VGKTQLVRAVAREAGAELLAVSAPALQGARPGETEENVRRVFQRAQELAGRRPTLLFLDE 304
Query: 531 VDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGK 590
VDAL +RG R++ Q+L LDG + V V+G+TNRPD +D A+ RPGRF +
Sbjct: 305 VDALCPRRGGPHQAPESRVVAQVLTLLDGISGDREVVVVGSTNRPDALDPALRRPGRFDR 364
Query: 591 LLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 626
+ + PT +R IL+ + K PI VDL +A+
Sbjct: 365 EVVIGTPTLGQRKAILQVITSKMPISSQVDLSLLAE 400
Score = 325 (119.5 bits), Expect = 4.4e-26, P = 4.4e-26
Identities = 73/222 (32%), Positives = 116/222 (52%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++ +GG+E +LK + PL P+ +G+ G+LLYGPPGC KT L A+A
Sbjct: 465 WEQIGGLEDAKRKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSC 524
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQR--EM 240
F +S ++ S G SE+ + +F +A P++VF+DEID+I R + +
Sbjct: 525 HCSFVSVSGADLFSPFVGDSEKILSQVFQQARANTPAVVFLDEIDSILGSRSISKTGCNV 584
Query: 241 ERRIVTQLMTCMDES--HRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPG 298
+ R+++ L+ +D + + G V+++ ATNRPD +D AL RPG
Sbjct: 585 QERVLSVLLNELDGVGLKTIERRGSKSDQHEFQEVFNSNVMIVAATNRPDVLDDALLRPG 644
Query: 299 RFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARST 340
R D+ I + PDE +R+ IL V T+N+ V L +A T
Sbjct: 645 RLDKIIYIPPPDEKSRLSILRVCTKNMPVGPDVSLENLAAET 686
Score = 307 (113.1 bits), Expect = 7.8e-63, Sum P(3) = 7.8e-63
Identities = 63/161 (39%), Positives = 95/161 (59%)
Query: 403 DFEEATKMVQPSSRRE--GFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGV 460
DF EA K +QPSS R G + + WE +GGL+ + + + I +KFP E+ G+
Sbjct: 438 DFLEAFKKIQPSSFRSVIGLMDVKPITWEQIGGLEDAKRKLKQSIEWPLKFPREFVRMGL 497
Query: 461 DLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRART 520
G LLYGPPGC KT + +A+A +F+ + G +L + +VG+SE + +F +AR
Sbjct: 498 TQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKILSQVFQQARA 557
Query: 521 CSPCILFFDEVDALTTKRG--KEGGWVVERLLNQLLIELDG 559
+P ++F DE+D++ R K G V ER+L+ LL ELDG
Sbjct: 558 NTPAVVFLDEIDSILGSRSISKTGCNVQERVLSVLLNELDG 598
Score = 294 (108.6 bits), Expect = 7.8e-63, Sum P(3) = 7.8e-63
Identities = 77/221 (34%), Positives = 109/221 (49%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVP 185
LGG+ + L+ + +PL +P+ LG+ G+LL GPPG GKT+L A+A E G
Sbjct: 202 LGGLAEAADSLRELLRLPLLYPRSFASLGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 261
Query: 186 FYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIV 245
+SA + G +EEN+R +F +A +A +R L E V
Sbjct: 262 LLAVSAPALQGARPGETEENVRRVFQRAQE-------------LAGRRPTLLFLDE---V 305
Query: 246 TQLMTCMDESHRLVQPGXXXXXXXXXXXXPG--YVLVIGATNRPDAVDPALRRPGRFDRE 303
L H+ + G V+V+G+TNRPDA+DPALRRPGRFDRE
Sbjct: 306 DALCPRRGGPHQAPESRVVAQVLTLLDGISGDREVVVVGSTNRPDALDPALRRPGRFDRE 365
Query: 304 IVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFV 344
+V+G P R IL V+T + + DL +A T G+V
Sbjct: 366 VVIGTPTLGQRKAILQVITSKMPISSQVDLSLLAEMTVGYV 406
Score = 164 (62.8 bits), Expect = 7.8e-63, Sum P(3) = 7.8e-63
Identities = 42/130 (32%), Positives = 63/130 (48%)
Query: 566 VFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
V ++ ATNRPDV+D A+LRPGR K++Y+P P R IL + P+ V L +A
Sbjct: 624 VMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKSRLSILRVCTKNMPVGPDVSLENLA 683
Query: 626 QSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPSVS 685
++ C SG L ++ + T T+K HF ++L + PS+S
Sbjct: 684 -AETCL-FSGADLGNLCKEAAL------LALQENGLEAT--TVKQEHFLKSLKTVKPSLS 733
Query: 686 ELQIQRYKTL 695
+ YK L
Sbjct: 734 HKDLALYKNL 743
>GENEDB_PFALCIPARUM|MAL8P1.92 [details] [associations]
symbol:MAL8P1.92 "ATPase, putative"
species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:AL844507 RefSeq:XP_001349382.2
ProteinModelPortal:Q8IAX9 EnsemblProtists:MAL8P1.92:mRNA
GeneID:2655443 KEGG:pfa:MAL8P1.92 EuPathDB:PlasmoDB:PF3D7_0814300
Uniprot:Q8IAX9
Length = 1200
Score = 511 (184.9 bits), Expect = 1.3e-62, Sum P(3) = 1.3e-62
Identities = 98/231 (42%), Positives = 144/231 (62%)
Query: 406 EATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETG 465
E ++ E +PN+ +++G L ++ + + +K+ Y+ G++ G
Sbjct: 653 EGVNNIKKKMTNENICEVPNINLDNIGSLKKIKKILESKFILPVKYSNIYKHLGINKSMG 712
Query: 466 FLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCI 525
LLYGPPGCGKT++AKA++NE ANFI IKGPE+LNKYVGESE VR +FS A PC+
Sbjct: 713 ILLYGPPGCGKTMLAKAISNEMKANFIAIKGPEILNKYVGESEKKVREIFSYASVYKPCL 772
Query: 526 LFFDEVDALTTKRGKEGGWVV-ERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLR 584
+FFDE+D++ R +R++NQLL E+DG +R+GV++I TNRPD++D+A+LR
Sbjct: 773 IFFDEIDSICINRSNNKSVSASDRVVNQLLSEMDGLSQREGVYIIATTNRPDIIDKALLR 832
Query: 585 PGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
GRF +L+Y+ LP R IL+ L++ PID +V I SK SG
Sbjct: 833 SGRFDQLIYISLPKYQGRVDILKKLSKNMPIDKNVRFEEI--SKLTRGYSG 881
Score = 329 (120.9 bits), Expect = 2.2e-26, Sum P(3) = 2.2e-26
Identities = 77/220 (35%), Positives = 123/220 (55%)
Query: 125 DLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGV 184
++G ++ + + L+ + I+P+ + + + LG+ GILLYGPPGCGKT LA AI+NE
Sbjct: 677 NIGSLKKIKKILESKFILPVKYSNIYKHLGINKSMGILLYGPPGCGKTMLAKAISNEMKA 736
Query: 185 PFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQR-EMERR 243
F I E+++ G SE+ +R++FS A P ++F DEID+I R N + R
Sbjct: 737 NFIAIKGPEILNKYVGESEKKVREIFSYASVYKPCLIFFDEIDSICINRSNNKSVSASDR 796
Query: 244 IVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDRE 303
+V QL++ MD + + G V +I TNRPD +D AL R GRFD+
Sbjct: 797 VVNQLLSEMDGLSQ--REG---------------VYIIATTNRPDIIDKALLRSGRFDQL 839
Query: 304 IVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
I + +P RV IL L++N+ ++ + +I++ T G+
Sbjct: 840 IYISLPKYQGRVDILKKLSKNMPIDKNVRFEEISKLTRGY 879
Score = 135 (52.6 bits), Expect = 1.3e-62, Sum P(3) = 1.3e-62
Identities = 51/212 (24%), Positives = 95/212 (44%)
Query: 50 EFDLMKSMLRDSYSESKITRRKSEEKNIEFEVMPRKIDLVNAKSREVEMKKEESVXXXXX 109
EF + +ML++ I + +EKN++ + +I+ N MK+E +
Sbjct: 188 EF-IKNNMLKNKKKLKIIEGKLKDEKNVQSHLTNNQIN-ENMN----HMKQEHNKSSFNN 241
Query: 110 XXXXXXXXXXXPRFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGC 169
D G++++ +++ +I P Y +L + I ++G G
Sbjct: 242 SNKIINSIISNKTLNDFKGIKNIKKDILYSIIYP-YKFRLSNLNCI-----INIFGTSGT 295
Query: 170 GKTKLAHAIANETGVPFYKISATEVVSGVSGASEEN-IRDLFSKAYRTAP-SIVFIDEID 227
GKT L++AIA E G PF+ I E + +S ++ N +R LF +I+ ID+ID
Sbjct: 296 GKTTLSYAIAGECGCPFFYIKLPEYIKYISNDNKNNKLRILFEHIKNEYDKAILCIDDID 355
Query: 228 AIASKRENLQREMERRIVTQLMTCMDESHRLV 259
I S +++ + + T L+ S+ +V
Sbjct: 356 IIFSSKDD---STDLYLFTYLLNIFHNSNIIV 384
Score = 57 (25.1 bits), Expect = 1.3e-62, Sum P(3) = 1.3e-62
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 667 TIKLTHFEQALSKISPSVSELQIQRYKTLSETFK 700
TI H QA+ I SV++ QI+ YK + + FK
Sbjct: 1167 TITQKHIIQAIKIIPRSVTKEQIKYYKEICKKFK 1200
Score = 37 (18.1 bits), Expect = 2.2e-52, Sum P(3) = 2.2e-52
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 59 RDSYSESKITRRKSEEKNIEFEVMPRKIDLVNAKSREV 96
++ Y+++ I K E+NI P + L+N K V
Sbjct: 150 KNEYNQNNIEDEKMNEQNIHGHD-PNDV-LLNEKDLNV 185
>UNIPROTKB|F6UUI0 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
Ensembl:ENSCAFT00000021792 EMBL:AAEX03016099 Uniprot:F6UUI0
Length = 789
Score = 339 (124.4 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 88/256 (34%), Positives = 125/256 (48%)
Query: 431 VGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGAN 490
+GGL + +++P G+ + G LL GPPG GKT + +AVA EAGA
Sbjct: 236 LGGLSEAADSLRELLRLPLRYPRTLAALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 295
Query: 491 FIHIKGPELLNKYVGESELAVRTLFSRARTCS---PCILFFDEVDALTTKRGKEGGWVVE 547
+ + P L GE+E VR +F RAR + P +LF DEVDAL +RG
Sbjct: 296 LLAVSAPALQGARPGETEENVRRVFGRARELASRGPTLLFLDEVDALCPRRGGAHRAPES 355
Query: 548 RLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILE 607
R + Q+L LDG + V V+ +TNRPD +D A+ RPGRF + + + PT +R IL+
Sbjct: 356 RAVAQVLTLLDGIRGDRDVVVVASTNRPDALDPALRRPGRFDREVVIGTPTLKQRKAILQ 415
Query: 608 ALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFT 667
+ K PI VDL +A+ ++ L+ S+ + D P
Sbjct: 416 VITSKMPISSQVDLSLLAE------MTVGYVGADLTALCREAALHALLHSEKNKD-NP-A 467
Query: 668 IKLTHFEQALSKISPS 683
I T F +A KI PS
Sbjct: 468 IDETDFFEAFKKIQPS 483
Score = 325 (119.5 bits), Expect = 3.1e-25, Sum P(2) = 3.1e-25
Identities = 76/222 (34%), Positives = 116/222 (52%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++ +GG+E V +LK + PL P+ +G+ G+LLYGPPGC KT L A+A
Sbjct: 499 WEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSC 558
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQRE--M 240
F +S ++ S G SE+ + +F +A P+IVF+DEID+I R + E +
Sbjct: 559 HCSFVSVSGADLFSPFVGDSEKVLSQVFRQARANTPAIVFLDEIDSILGSRSISKTECNV 618
Query: 241 ERRIVTQLMTCMDES--HRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPG 298
+ R+++ L+ +D + G V+++ ATNRPD +D AL RPG
Sbjct: 619 QERVLSVLLNELDGVGLKTTERRGSKSDQQEFQEVFNRNVMIVAATNRPDVLDDALLRPG 678
Query: 299 RFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARST 340
R D+ I + PDE R+ IL V T+N+ + L IA T
Sbjct: 679 RLDKIIYIPPPDEKGRLSILKVCTKNMPMGPDVSLENIAAET 720
Score = 307 (113.1 bits), Expect = 2.7e-62, Sum P(3) = 2.7e-62
Identities = 67/165 (40%), Positives = 97/165 (58%)
Query: 399 ITMTDFEEATKMVQPSSRRE--GFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
I TDF EA K +QPSS R G I V WE +GGL+ ++ + + I +KFP E+
Sbjct: 468 IDETDFFEAFKKIQPSSFRSVIGLMDIKPVDWEQIGGLEDVKLKLKQSIEWPLKFPREFV 527
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
G+ G LLYGPPGC KT + +A+A +F+ + G +L + +VG+SE + +F
Sbjct: 528 RMGLTQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVLSQVFR 587
Query: 517 RARTCSPCILFFDEVDALTTKRG--KEGGWVVERLLNQLLIELDG 559
+AR +P I+F DE+D++ R K V ER+L+ LL ELDG
Sbjct: 588 QARANTPAIVFLDEIDSILGSRSISKTECNVQERVLSVLLNELDG 632
Score = 291 (107.5 bits), Expect = 2.7e-62, Sum P(3) = 2.7e-62
Identities = 77/221 (34%), Positives = 109/221 (49%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVP 185
LGG+ + L+ + +PL +P+ LG+ G+LL GPPG GKT+L A+A E G
Sbjct: 236 LGGLSEAADSLRELLRLPLRYPRTLAALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 295
Query: 186 FYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIV 245
+SA + G +EEN+R +F +A +AS+ L E V
Sbjct: 296 LLAVSAPALQGARPGETEENVRRVFGRARE-------------LASRGPTLLFLDE---V 339
Query: 246 TQLMTCMDESHRLVQPGXXXXXXXXXXXXPGY--VLVIGATNRPDAVDPALRRPGRFDRE 303
L +HR + G V+V+ +TNRPDA+DPALRRPGRFDRE
Sbjct: 340 DALCPRRGGAHRAPESRAVAQVLTLLDGIRGDRDVVVVASTNRPDALDPALRRPGRFDRE 399
Query: 304 IVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFV 344
+V+G P R IL V+T + + DL +A T G+V
Sbjct: 400 VVIGTPTLKQRKAILQVITSKMPISSQVDLSLLAEMTVGYV 440
Score = 163 (62.4 bits), Expect = 2.7e-62, Sum P(3) = 2.7e-62
Identities = 45/134 (33%), Positives = 69/134 (51%)
Query: 564 KGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGL--ILEALARKKPIDDSVDL 621
+ V ++ ATNRPDV+D A+LRPGR K++Y+P P PDE+G IL+ + P+ V L
Sbjct: 656 RNVMIVAATNRPDVLDDALLRPGRLDKIIYIP-P-PDEKGRLSILKVCTKNMPMGPDVSL 713
Query: 622 HTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKIS 681
IA ++ C SG L ++ + T T+K HF ++L +
Sbjct: 714 ENIA-AETCF-FSGADLGNLCKEAAL------LALQENGLEAT--TVKQEHFLKSLKTVK 763
Query: 682 PSVSELQIQRYKTL 695
PS+S + Y+ L
Sbjct: 764 PSLSPEDLTLYENL 777
Score = 38 (18.4 bits), Expect = 3.1e-25, Sum P(2) = 3.1e-25
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 394 MERLTITMTDFEEATKMVQPSSRREGFSAIPNV 426
+E T+ F ++ K V+PS E + N+
Sbjct: 745 LEATTVKQEHFLKSLKTVKPSLSPEDLTLYENL 777
>TAIR|locus:2007574 [details] [associations]
symbol:PEX6 "peroxin 6" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IMP]
[GO:0006635 "fatty acid beta-oxidation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524
GO:GO:0005737 GO:GO:0006635 GO:GO:0016558 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AC006550 TCDB:3.A.20.1.2
EMBL:AY333116 EMBL:AY078962 EMBL:BT001151 IPI:IPI00517292
PIR:F86160 RefSeq:NP_171799.2 UniGene:At.42567
ProteinModelPortal:Q8RY16 SMR:Q8RY16 STRING:Q8RY16 PaxDb:Q8RY16
PRIDE:Q8RY16 EnsemblPlants:AT1G03000.1 GeneID:839315
KEGG:ath:AT1G03000 GeneFarm:2442 TAIR:At1g03000
HOGENOM:HOG000241031 InParanoid:Q8RY16 KO:K13339 OMA:RRCFSHE
PhylomeDB:Q8RY16 ProtClustDB:CLSN2690380 Genevestigator:Q8RY16
Uniprot:Q8RY16
Length = 941
Score = 638 (229.6 bits), Expect = 4.2e-62, P = 4.2e-62
Identities = 177/603 (29%), Positives = 301/603 (49%)
Query: 133 LEELKMEVIVPLYHPQL-PQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVPFYKISA 191
L+E + ++ + P L P L + +LL+G PGCGK + +A G+ + S
Sbjct: 351 LQEETVNILASVLSPPLCPSALASKLRVAVLLHGIPGCGKRTVVKYVARRLGLHVVEFSC 410
Query: 192 TEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDA---IASK------RENLQREMER 242
+++ + + F+ A R +P+I+ + D + S+ R + E+
Sbjct: 411 HSLLASSERKTSTALAQTFNMARRYSPTILLLRHFDVFKNLGSQDGSLGDRVGVSFEIAS 470
Query: 243 --RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGY-VLVIGATNRPDAVDPALRRPGR 299
R +T+ ++ D S + + G+ VL+I + + + P +RR
Sbjct: 471 VIRELTEPVSNGDSS--MEEKSNSNFSENEVGKFRGHQVLLIASAESTEGISPTIRRC-- 526
Query: 300 FDREIVLGVPDENARVQILSV----LTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXX 355
F EI +G ++ R ++LS +++ L + + + T GF+
Sbjct: 527 FSHEIRMGSLNDEQRSEMLSQSLQGVSQFLNISSDEFMKGLVGQTSGFLPRDLQALVADA 586
Query: 356 XXXXMKRIIDQRKSELSGNSIAEQ-HSDDWWRQPWLPEEMERLTITMTDFEEATKMVQPS 414
I Q NS+++ H D + + E+LT E+ TK + S
Sbjct: 587 GANLY---ISQESETKKINSLSDDLHGVDIHQASQIDNSTEKLTAK----EDFTKALDRS 639
Query: 415 SRRE----GFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEF---GVDLETGFL 467
+R G +PNVKW+DVGGL+ ++ I+ ++ P +++ G+ +G L
Sbjct: 640 KKRNASALGAPKVPNVKWDDVGGLEDVKTS----ILDTVQLPLLHKDLFSSGLRKRSGVL 695
Query: 468 LYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILF 527
LYGPPG GKTL+AKAVA E NF+ +KGPEL+N Y+GESE VR +F +AR+ PC++F
Sbjct: 696 LYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIF 755
Query: 528 FDEVDALTTKRGKEG--GWVVERLLNQLLIELDG-ADKRKGVFVIGATNRPDVMDRAVLR 584
FDE+D+L RG G G V++R+++Q+L E+DG +D + +F+IGA+NRPD++D A+LR
Sbjct: 756 FDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSSQDLFIIGASNRPDLIDPALLR 815
Query: 585 PGRFGKLLYVPLPTPDE-RGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXX 643
PGRF KLLYV + R +L+AL RK + + V L+++A+ K +G
Sbjct: 816 PGRFDKLLYVGVNADASYRERVLKALTRKFKLSEDVSLYSVAK-KCPSTFTGADMYALCA 874
Query: 644 XXXXXXXXXKLISSKSSS------DVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSE 697
K+ S S D ++ F +A+ ++SPS+S ++++Y+ L +
Sbjct: 875 DAWFQAAKRKVSKSDSGDMPTEEDDPDSVVVEYVDFIKAMDQLSPSLSITELKKYEMLRD 934
Query: 698 TFK 700
F+
Sbjct: 935 QFQ 937
Score = 344 (126.2 bits), Expect = 5.5e-28, P = 5.5e-28
Identities = 88/266 (33%), Positives = 135/266 (50%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
++ D+GG+E V + V +PL H L G+R +G+LLYGPPG GKT LA A+A E
Sbjct: 656 KWDDVGGLEDVKTSILDTVQLPLLHKDLFS-SGLRKRSGVLLYGPPGTGKTLLAKAVATE 714
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR--ENLQRE 239
+ F + E+++ G SE+N+RD+F KA P ++F DE+D++A R
Sbjct: 715 CSLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGASGDSGG 774
Query: 240 MERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
+ R+V+Q++ +D G + +IGA+NRPD +DPAL RPGR
Sbjct: 775 VMDRVVSQMLAEID--------GLSDSSQD--------LFIIGASNRPDLIDPALLRPGR 818
Query: 300 FDREIVLGV-PDENARVQILSVLTRNLRVEGSFDLVKIARSTPG-FVXXXXXXXXXXXXX 357
FD+ + +GV D + R ++L LTR ++ L +A+ P F
Sbjct: 819 FDKLLYVGVNADASYRERVLKALTRKFKLSEDVSLYSVAKKCPSTFTGADMYALCADAWF 878
Query: 358 XXMKRIIDQRKSELSGNSIAEQHSDD 383
KR + KS+ SG+ E+ D
Sbjct: 879 QAAKRKVS--KSD-SGDMPTEEDDPD 901
>UNIPROTKB|E2QSC5 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 Ensembl:ENSCAFT00000021792 Uniprot:E2QSC5
Length = 747
Score = 339 (124.4 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 88/256 (34%), Positives = 125/256 (48%)
Query: 431 VGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGAN 490
+GGL + +++P G+ + G LL GPPG GKT + +AVA EAGA
Sbjct: 192 LGGLSEAADSLRELLRLPLRYPRTLAALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 251
Query: 491 FIHIKGPELLNKYVGESELAVRTLFSRARTCS---PCILFFDEVDALTTKRGKEGGWVVE 547
+ + P L GE+E VR +F RAR + P +LF DEVDAL +RG
Sbjct: 252 LLAVSAPALQGARPGETEENVRRVFGRARELASRGPTLLFLDEVDALCPRRGGAHRAPES 311
Query: 548 RLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILE 607
R + Q+L LDG + V V+ +TNRPD +D A+ RPGRF + + + PT +R IL+
Sbjct: 312 RAVAQVLTLLDGIRGDRDVVVVASTNRPDALDPALRRPGRFDREVVIGTPTLKQRKAILQ 371
Query: 608 ALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFT 667
+ K PI VDL +A+ ++ L+ S+ + D P
Sbjct: 372 VITSKMPISSQVDLSLLAE------MTVGYVGADLTALCREAALHALLHSEKNKD-NP-A 423
Query: 668 IKLTHFEQALSKISPS 683
I T F +A KI PS
Sbjct: 424 IDETDFFEAFKKIQPS 439
Score = 315 (115.9 bits), Expect = 3.4e-24, Sum P(2) = 3.4e-24
Identities = 76/224 (33%), Positives = 117/224 (52%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++ +GG+E V +LK + PL P+ +G+ G+LLYGPPGC KT L A+A
Sbjct: 455 WEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSC 514
Query: 183 GVPFYKISATEVVSGVSGASEENI--RDLFSKAYRTAPSIVFIDEIDAIASKRENLQRE- 239
F +S ++ S G SE+ + + +F +A P+IVF+DEID+I R + E
Sbjct: 515 HCSFVSVSGADLFSPFVGDSEKVLSQQKVFRQARANTPAIVFLDEIDSILGSRSISKTEC 574
Query: 240 -MERRIVTQLMTCMDES--HRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRR 296
++ R+++ L+ +D + G V+++ ATNRPD +D AL R
Sbjct: 575 NVQERVLSVLLNELDGVGLKTTERRGSKSDQQEFQEVFNRNVMIVAATNRPDVLDDALLR 634
Query: 297 PGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARST 340
PGR D+ I + PDE R+ IL V T+N+ + L IA T
Sbjct: 635 PGRLDKIIYIPPPDEKGRLSILKVCTKNMPMGPDVSLENIAAET 678
Score = 302 (111.4 bits), Expect = 7.5e-62, Sum P(3) = 7.5e-62
Identities = 68/167 (40%), Positives = 99/167 (59%)
Query: 399 ITMTDFEEATKMVQPSSRRE--GFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
I TDF EA K +QPSS R G I V WE +GGL+ ++ + + I +KFP E+
Sbjct: 424 IDETDFFEAFKKIQPSSFRSVIGLMDIKPVDWEQIGGLEDVKLKLKQSIEWPLKFPREFV 483
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESE--LAVRTL 514
G+ G LLYGPPGC KT + +A+A +F+ + G +L + +VG+SE L+ + +
Sbjct: 484 RMGLTQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVLSQQKV 543
Query: 515 FSRARTCSPCILFFDEVDALTTKRG--KEGGWVVERLLNQLLIELDG 559
F +AR +P I+F DE+D++ R K V ER+L+ LL ELDG
Sbjct: 544 FRQARANTPAIVFLDEIDSILGSRSISKTECNVQERVLSVLLNELDG 590
Score = 291 (107.5 bits), Expect = 7.5e-62, Sum P(3) = 7.5e-62
Identities = 77/221 (34%), Positives = 109/221 (49%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVP 185
LGG+ + L+ + +PL +P+ LG+ G+LL GPPG GKT+L A+A E G
Sbjct: 192 LGGLSEAADSLRELLRLPLRYPRTLAALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 251
Query: 186 FYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIV 245
+SA + G +EEN+R +F +A +AS+ L E V
Sbjct: 252 LLAVSAPALQGARPGETEENVRRVFGRARE-------------LASRGPTLLFLDE---V 295
Query: 246 TQLMTCMDESHRLVQPGXXXXXXXXXXXXPGY--VLVIGATNRPDAVDPALRRPGRFDRE 303
L +HR + G V+V+ +TNRPDA+DPALRRPGRFDRE
Sbjct: 296 DALCPRRGGAHRAPESRAVAQVLTLLDGIRGDRDVVVVASTNRPDALDPALRRPGRFDRE 355
Query: 304 IVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFV 344
+V+G P R IL V+T + + DL +A T G+V
Sbjct: 356 VVIGTPTLKQRKAILQVITSKMPISSQVDLSLLAEMTVGYV 396
Score = 163 (62.4 bits), Expect = 7.5e-62, Sum P(3) = 7.5e-62
Identities = 45/134 (33%), Positives = 69/134 (51%)
Query: 564 KGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGL--ILEALARKKPIDDSVDL 621
+ V ++ ATNRPDV+D A+LRPGR K++Y+P P PDE+G IL+ + P+ V L
Sbjct: 614 RNVMIVAATNRPDVLDDALLRPGRLDKIIYIP-P-PDEKGRLSILKVCTKNMPMGPDVSL 671
Query: 622 HTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKIS 681
IA ++ C SG L ++ + T T+K HF ++L +
Sbjct: 672 ENIA-AETCF-FSGADLGNLCKEAAL------LALQENGLEAT--TVKQEHFLKSLKTVK 721
Query: 682 PSVSELQIQRYKTL 695
PS+S + Y+ L
Sbjct: 722 PSLSPEDLTLYENL 735
Score = 38 (18.4 bits), Expect = 3.4e-24, Sum P(2) = 3.4e-24
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 394 MERLTITMTDFEEATKMVQPSSRREGFSAIPNV 426
+E T+ F ++ K V+PS E + N+
Sbjct: 703 LEATTVKQEHFLKSLKTVKPSLSPEDLTLYENL 735
>ZFIN|ZDB-GENE-060929-204 [details] [associations]
symbol:spata5l1 "spermatogenesis associated 5-like
1" species:7955 "Danio rerio" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-060929-204 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 CTD:79029 EMBL:CU929075
EMBL:CU595864 IPI:IPI00804177 RefSeq:NP_001070056.2
UniGene:Dr.80583 Ensembl:ENSDART00000101660
Ensembl:ENSDART00000129459 GeneID:767648 KEGG:dre:767648
NextBio:20918042 Uniprot:F1Q8W3
Length = 748
Score = 359 (131.4 bits), Expect = 6.7e-30, P = 6.7e-30
Identities = 83/256 (32%), Positives = 131/256 (51%)
Query: 431 VGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGAN 490
+GG++ + I +++P + G+ G LL GPPG GKTL+ + VA + GA
Sbjct: 189 LGGMEDVFASLKEMITFPLRYPGSLRQLGLSCPRGLLLIGPPGVGKTLLVRCVAKDIGAT 248
Query: 491 FIHIKGPELLNKYVGESELAVRTLFSRARTCS---PCILFFDEVDALTTKRGKEGGWVVE 547
+ + GPE+ GESE +R +F +AR + PC+L DE+D+L +R
Sbjct: 249 LVTVNGPEVTGSRPGESEENLRRVFEQARDAADDGPCVLLIDEIDSLCPRRTGSSSAPEN 308
Query: 548 RLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILE 607
RL+ QLL +D +G +IGATN+PD +D A+ RPGRF + + + +P+ +R IL+
Sbjct: 309 RLVAQLLTLMDAIGSHEGFVIIGATNQPDSLDPALRRPGRFDREVIIGVPSLLQRRSILK 368
Query: 608 ALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFT 667
+ R+ P+ VDL+T+A+ C G S +S+ P
Sbjct: 369 CVCREMPLSPDVDLNTLAEMT-C----GYVGADLSALSREAALQAMRHSQMGASE--P-- 419
Query: 668 IKLTHFEQALSKISPS 683
+ + HF QAL + PS
Sbjct: 420 VSMQHFMQALRHVQPS 435
Score = 310 (114.2 bits), Expect = 3.2e-61, Sum P(3) = 3.2e-61
Identities = 66/170 (38%), Positives = 98/170 (57%)
Query: 399 ITMTDFEEATKMVQPSSRREGFSA--IPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
++M F +A + VQPS R A + WE +GGL+ ++ + + I ++FPE +
Sbjct: 420 VSMQHFMQALRHVQPSCLRSSIGATDFKPIGWEQIGGLEDVKLKLKQSIEWPMRFPEAFV 479
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
GV G LLYGPPGC KT + KA A+ + +F + G EL + YVG+SE + LF+
Sbjct: 480 RLGVSRPRGVLLYGPPGCAKTTLVKAAASSSHCSFFSLSGAELFSPYVGDSEKTLAQLFA 539
Query: 517 RARTCSPCILFFDEVDALTTKR--GKEGGWVVE-RLLNQLLIELDGADKR 563
+AR C+P I+F DEVD++ R G V+ ++L+ LL ELDG R
Sbjct: 540 QARACAPSIVFLDEVDSMVGSREDGSSSSHSVQSQVLSVLLTELDGVGVR 589
Score = 302 (111.4 bits), Expect = 3.2e-61, Sum P(3) = 3.2e-61
Identities = 82/219 (37%), Positives = 111/219 (50%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVP 185
LGGME V LK + PL +P + LG+ G+LL GPPG GKT L +A + G
Sbjct: 189 LGGMEDVFASLKEMITFPLRYPGSLRQLGLSCPRGLLLIGPPGVGKTLLVRCVAKDIGAT 248
Query: 186 FYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIV 245
++ EV G SEEN+R +F +A A + ID I S RR
Sbjct: 249 LVTVNGPEVTGSRPGESEENLRRVFEQARDAADDGPCVLLIDEIDSL-------CPRR-- 299
Query: 246 TQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDREIV 305
T + + +RLV G+V +IGATN+PD++DPALRRPGRFDRE++
Sbjct: 300 TGSSSAPE--NRLV--AQLLTLMDAIGSHEGFV-IIGATNQPDSLDPALRRPGRFDREVI 354
Query: 306 LGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFV 344
+GVP R IL + R + + DL +A T G+V
Sbjct: 355 IGVPSLLQRRSILKCVCREMPLSPDVDLNTLAEMTCGYV 393
Score = 235 (87.8 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 49/134 (36%), Positives = 80/134 (59%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++ +GG+E V +LK + P+ P+ LGV G+LLYGPPGC KT L A A+ +
Sbjct: 451 WEQIGGLEDVKLKLKQSIEWPMRFPEAFVRLGVSRPRGVLLYGPPGCAKTTLVKAAASSS 510
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKREN---LQRE 239
F+ +S E+ S G SE+ + LF++A APSIVF+DE+D++ RE+
Sbjct: 511 HCSFFSLSGAELFSPYVGDSEKTLAQLFAQARACAPSIVFLDEVDSMVGSREDGSSSSHS 570
Query: 240 MERRIVTQLMTCMD 253
++ ++++ L+T +D
Sbjct: 571 VQSQVLSVLLTELD 584
Score = 137 (53.3 bits), Expect = 3.2e-61, Sum P(3) = 3.2e-61
Identities = 44/151 (29%), Positives = 71/151 (47%)
Query: 541 EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
EGG + L+Q+ EL K V ++ ATNRP+ +D A+LRPGR +++YVP P
Sbjct: 604 EGGDQEDVRLHQM--ELQEVCN-KDVLIVAATNRPEALDSALLRPGRLDQIIYVPPPDLQ 660
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSS 660
R +L + P+ V L +A E SG L++ +
Sbjct: 661 ARLAVLRICTKSVPLHQDVCLEDLAAQT--ELFSGADLENLCKEAA-------LLALRED 711
Query: 661 SDVTPFTIKLTHFEQALSKISPSVSELQIQR 691
+ ++ +F +AL +SPS+S Q+Q+
Sbjct: 712 G-LAVSCVRQKYFLKALQMLSPSLSAEQLQQ 741
Score = 127 (49.8 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 27/66 (40%), Positives = 41/66 (62%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
VL++ ATNRP+A+D AL RPGR D+ I + PD AR+ +L + T+++ + L +A
Sbjct: 626 VLIVAATNRPEALDSALLRPGRLDQIIYVPPPDLQARLAVLRICTKSVPLHQDVCLEDLA 685
Query: 338 RSTPGF 343
T F
Sbjct: 686 AQTELF 691
>UNIPROTKB|E9PE75 [details] [associations]
symbol:PEX1 "Peroxisome biogenesis factor 1" species:9606
"Homo sapiens" [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0006625 "protein targeting to peroxisome" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR025653 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005778 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
EMBL:AC007566 GO:GO:0042623 GO:GO:0006625 PANTHER:PTHR23077:SF12
HGNC:HGNC:8850 InterPro:IPR015343 Pfam:PF09263 IPI:IPI00924762
ProteinModelPortal:E9PE75 SMR:E9PE75 Ensembl:ENST00000438045
UCSC:uc011khs.2 ArrayExpress:E9PE75 Bgee:E9PE75 Uniprot:E9PE75
Length = 961
Score = 505 (182.8 bits), Expect = 1.3e-60, Sum P(4) = 1.3e-60
Identities = 103/232 (44%), Positives = 146/232 (62%)
Query: 395 ERLTITMTDFEEATKMVQPSSRREGFSAIP-NVKWEDVGGLDYLRHEFDRYIVRRIKFPE 453
E+L +T DF++A + P+S R P ++ W+ +GGL +R I K+PE
Sbjct: 483 EKLVLTTLDFQKALRGFLPASLRSVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPE 542
Query: 454 EYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRT 513
+ + TG LLYGPPG GKTL+A +A E+ NFI +KGPELL+KY+G SE AVR
Sbjct: 543 LFANLPIRQRTGILLYGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRD 602
Query: 514 LFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
+F RA+ PCILFFDE +++ +RG + V +R++NQLL +LDG + +GV+V+ AT+
Sbjct: 603 IFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATS 662
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
RPD++D A+LRPGR K +Y P P R IL L+ P+ D VDL +A
Sbjct: 663 RPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVA 714
Score = 239 (89.2 bits), Expect = 1.6e-26, Sum P(3) = 1.6e-26
Identities = 51/128 (39%), Positives = 77/128 (60%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVP 185
+GG+ V + L + +P +P+L L +R GILLYGPPG GKT LA IA E+ +
Sbjct: 520 IGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVIARESRMN 579
Query: 186 FYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIV 245
F + E++S GASE+ +RD+F +A P I+F DE ++IA +R + + R+V
Sbjct: 580 FISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRVV 639
Query: 246 TQLMTCMD 253
QL+T +D
Sbjct: 640 NQLLTQLD 647
Score = 141 (54.7 bits), Expect = 1.6e-26, Sum P(3) = 1.6e-26
Identities = 29/66 (43%), Positives = 43/66 (65%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
V V+ AT+RPD +DPAL RPGR D+ + PD+ +R++IL+VL+ +L + DL +A
Sbjct: 655 VYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVA 714
Query: 338 RSTPGF 343
T F
Sbjct: 715 SVTDSF 720
Score = 97 (39.2 bits), Expect = 1.3e-60, Sum P(4) = 1.3e-60
Identities = 41/121 (33%), Positives = 59/121 (48%)
Query: 122 RFQDLGGMESV----LEELKMEVIV-PLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAH 176
+ LGG+ S+ LE + ++ PL + G+R A +LL G G GK+ LA
Sbjct: 230 KLSSLGGVNSLGVSSLEHITHSLLGRPLSRQLMSLVAGLRNGA-LLLTGGKGSGKSTLAK 288
Query: 177 AIANETGVPFYKISA-TEVVS--GVSGASEENIRDL----FSKAYRTAPSIVFIDEIDAI 229
AI E F K+ A E V + G ENI+ FS+A PS+V +D++D I
Sbjct: 289 AICKEA---FDKLDAHVERVDCKALRGKRLENIQKTLEVAFSEAVWMQPSVVLLDDLDLI 345
Query: 230 A 230
A
Sbjct: 346 A 346
Score = 49 (22.3 bits), Expect = 1.3e-60, Sum P(4) = 1.3e-60
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 664 TPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETFK 700
T I +H AL PS+SE + + L E+F+
Sbjct: 903 TRLAISQSHLMTALGHTRPSISEDDWKNFAELYESFQ 939
Score = 42 (19.8 bits), Expect = 1.3e-60, Sum P(4) = 1.3e-60
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 309 PDENARVQIL-SVLTRNLRVE-GSF---DLVKIARSTPGFV 344
P++ R +IL +V+ L + F DL +A+ T GFV
Sbjct: 418 PNQEQRCEILCNVIKNKLDCDINKFTDLDLQHVAKETGGFV 458
>UNIPROTKB|O43933 [details] [associations]
symbol:PEX1 "Peroxisome biogenesis factor 1" species:9606
"Homo sapiens" [GO:0016558 "protein import into peroxisome matrix"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0006625 "protein targeting to peroxisome"
evidence=IMP] [GO:0032403 "protein complex binding" evidence=IDA]
[GO:0005777 "peroxisome" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0042623 "ATPase activity, coupled" evidence=IMP]
[GO:0060152 "microtubule-based peroxisome localization"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005778
"peroxisomal membrane" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IMP] [GO:0007031 "peroxisome organization" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0032403 GO:GO:0005778 EMBL:CH471091
EMBL:CH236949 GO:GO:0016558 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:AC007566 GO:GO:0042623
Orphanet:912 EMBL:AC000064 TCDB:3.A.20.1.1 Orphanet:772 Orphanet:44
GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12 EMBL:AF030356
EMBL:AF026086 EMBL:AB008112 EMBL:AB052090 EMBL:AB052091
EMBL:AB052092 EMBL:AK292955 EMBL:BC035575 IPI:IPI00411291
RefSeq:NP_000457.1 UniGene:Hs.164682 ProteinModelPortal:O43933
SMR:O43933 IntAct:O43933 STRING:O43933 PhosphoSite:O43933
PaxDb:O43933 PRIDE:O43933 DNASU:5189 Ensembl:ENST00000248633
Ensembl:ENST00000428214 GeneID:5189 KEGG:hsa:5189 UCSC:uc003uly.3
CTD:5189 GeneCards:GC07M092116 HGNC:HGNC:8850 HPA:HPA020235
MIM:214100 MIM:601539 MIM:602136 neXtProt:NX_O43933
PharmGKB:PA33192 HOVERGEN:HBG008169 InParanoid:O43933 OMA:HSWEKEK
PhylomeDB:O43933 GenomeRNAi:5189 NextBio:20068 ArrayExpress:O43933
Bgee:O43933 CleanEx:HS_PEX1 Genevestigator:O43933
GermOnline:ENSG00000127980 InterPro:IPR015343 Pfam:PF09263
Uniprot:O43933
Length = 1283
Score = 505 (182.8 bits), Expect = 2.7e-59, Sum P(4) = 2.7e-59
Identities = 103/232 (44%), Positives = 146/232 (62%)
Query: 395 ERLTITMTDFEEATKMVQPSSRREGFSAIP-NVKWEDVGGLDYLRHEFDRYIVRRIKFPE 453
E+L +T DF++A + P+S R P ++ W+ +GGL +R I K+PE
Sbjct: 805 EKLVLTTLDFQKALRGFLPASLRSVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPE 864
Query: 454 EYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRT 513
+ + TG LLYGPPG GKTL+A +A E+ NFI +KGPELL+KY+G SE AVR
Sbjct: 865 LFANLPIRQRTGILLYGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRD 924
Query: 514 LFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
+F RA+ PCILFFDE +++ +RG + V +R++NQLL +LDG + +GV+V+ AT+
Sbjct: 925 IFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATS 984
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
RPD++D A+LRPGR K +Y P P R IL L+ P+ D VDL +A
Sbjct: 985 RPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVA 1036
Score = 239 (89.2 bits), Expect = 5.2e-26, Sum P(3) = 5.2e-26
Identities = 51/128 (39%), Positives = 77/128 (60%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVP 185
+GG+ V + L + +P +P+L L +R GILLYGPPG GKT LA IA E+ +
Sbjct: 842 IGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVIARESRMN 901
Query: 186 FYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIV 245
F + E++S GASE+ +RD+F +A P I+F DE ++IA +R + + R+V
Sbjct: 902 FISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRVV 961
Query: 246 TQLMTCMD 253
QL+T +D
Sbjct: 962 NQLLTQLD 969
Score = 141 (54.7 bits), Expect = 5.2e-26, Sum P(3) = 5.2e-26
Identities = 29/66 (43%), Positives = 43/66 (65%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
V V+ AT+RPD +DPAL RPGR D+ + PD+ +R++IL+VL+ +L + DL +A
Sbjct: 977 VYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVA 1036
Query: 338 RSTPGF 343
T F
Sbjct: 1037 SVTDSF 1042
Score = 97 (39.2 bits), Expect = 2.7e-59, Sum P(4) = 2.7e-59
Identities = 41/121 (33%), Positives = 59/121 (48%)
Query: 122 RFQDLGGMESV----LEELKMEVIV-PLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAH 176
+ LGG+ S+ LE + ++ PL + G+R A +LL G G GK+ LA
Sbjct: 552 KLSSLGGVNSLGVSSLEHITHSLLGRPLSRQLMSLVAGLRNGA-LLLTGGKGSGKSTLAK 610
Query: 177 AIANETGVPFYKISA-TEVVS--GVSGASEENIRDL----FSKAYRTAPSIVFIDEIDAI 229
AI E F K+ A E V + G ENI+ FS+A PS+V +D++D I
Sbjct: 611 AICKEA---FDKLDAHVERVDCKALRGKRLENIQKTLEVAFSEAVWMQPSVVLLDDLDLI 667
Query: 230 A 230
A
Sbjct: 668 A 668
Score = 49 (22.3 bits), Expect = 2.7e-59, Sum P(4) = 2.7e-59
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 664 TPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETFK 700
T I +H AL PS+SE + + L E+F+
Sbjct: 1225 TRLAISQSHLMTALGHTRPSISEDDWKNFAELYESFQ 1261
Score = 42 (19.8 bits), Expect = 2.7e-59, Sum P(4) = 2.7e-59
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 309 PDENARVQIL-SVLTRNLRVE-GSF---DLVKIARSTPGFV 344
P++ R +IL +V+ L + F DL +A+ T GFV
Sbjct: 740 PNQEQRCEILCNVIKNKLDCDINKFTDLDLQHVAKETGGFV 780
>POMBASE|SPAC17A5.01 [details] [associations]
symbol:pex6 "peroxin-6 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0007031 "peroxisome
organization" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC17A5.01 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329670 GO:GO:0005777 GenomeReviews:CU329670_GR GO:GO:0007031
GO:GO:0016887 GO:GO:0005778 eggNOG:COG0464 KO:K13339 PIR:T37816
RefSeq:NP_593468.1 ProteinModelPortal:O13764
EnsemblFungi:SPAC17A5.01.1 GeneID:2542437 KEGG:spo:SPAC17A5.01
OrthoDB:EOG48PQTF NextBio:20803494 Uniprot:O13764
Length = 948
Score = 509 (184.2 bits), Expect = 2.3e-58, Sum P(3) = 2.3e-58
Identities = 107/243 (44%), Positives = 158/243 (65%)
Query: 399 ITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEF 458
IT D + + ++ F+ +P V W+D+GGL+ + + ++FPE + +
Sbjct: 626 ITEQDVDVSINRIRKEKSNTIFT-VPKVNWDDIGGLEEAKTVLRDTLQLPLQFPELFSQ- 683
Query: 459 GVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRA 518
G+ +G LLYGPPG GKTL+AKAVA E F+ IKGPELLN YVGESE VR +F +A
Sbjct: 684 GLKPRSGVLLYGPPGTGKTLLAKAVATELSLEFVSIKGPELLNMYVGESEANVRNVFEKA 743
Query: 519 RTCSPCILFFDEVDALTTKRGK--EGGWVVERLLNQLLIELDGA--DKRKGVFVIGATNR 574
R SPC++FFDE+D++ RG + G V++R+++QLL ELD D K VFVIGATNR
Sbjct: 744 RNSSPCVIFFDELDSIAPHRGNSSDSGNVMDRVVSQLLAELDSISKDNNKYVFVIGATNR 803
Query: 575 PDVMDRAVLRPGRFGKLLYVPLPTPDE-RGLILEALARKKPIDDSVDLHTIAQSKFCE-N 632
PD++D ++LRPGRF KL+Y+ + +E + +L AL + +D+++DL+ IA++ C N
Sbjct: 804 PDLLDPSLLRPGRFDKLVYLGINKSEESKASMLRALTKTFKLDETIDLNEIAKN--CHPN 861
Query: 633 LSG 635
+G
Sbjct: 862 FTG 864
Score = 388 (141.6 bits), Expect = 4.0e-34, Sum P(2) = 4.0e-34
Identities = 97/301 (32%), Positives = 163/301 (54%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+E L+ + +PL P+L G++P +G+LLYGPPG GKT LA A+A E
Sbjct: 654 WDDIGGLEEAKTVLRDTLQLPLQFPELFSQ-GLKPRSGVLLYGPPGTGKTLLAKAVATEL 712
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQRE--M 240
+ F I E+++ G SE N+R++F KA ++P ++F DE+D+IA R N +
Sbjct: 713 SLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVIFFDELDSIAPHRGNSSDSGNV 772
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRF 300
R+V+QL+ +D + YV VIGATNRPD +DP+L RPGRF
Sbjct: 773 MDRVVSQLLAELDSISK---------------DNNKYVFVIGATNRPDLLDPSLLRPGRF 817
Query: 301 DREIVLGV-PDENARVQILSVLTRNLRVEGSFDLVKIARST-PGFVXXXXXXXXXXXXXX 358
D+ + LG+ E ++ +L LT+ +++ + DL +IA++ P F
Sbjct: 818 DKLVYLGINKSEESKASMLRALTKTFKLDETIDLNEIAKNCHPNFTGADMYALCSDAVLS 877
Query: 359 XMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMERLTITMTDFEEATKMVQPS-SRR 417
+KR ++ + + + +++++++ + +E L IT DF + K ++PS S +
Sbjct: 878 AIKRKTNEIDLLIQASG-TDLSTEEFFKRNENQDSLE-LRITKEDFLTSLKKLRPSISEQ 935
Query: 418 E 418
E
Sbjct: 936 E 936
Score = 89 (36.4 bits), Expect = 2.3e-58, Sum P(3) = 2.3e-58
Identities = 27/91 (29%), Positives = 46/91 (50%)
Query: 150 PQWL-GVRPMAGILLYGPPGCGKTKLAHAIANETGVPFYKISATEVVSGVSGASEENIRD 208
PQ + G P LL+G P GKTK +A+ P + IS+ E + E + D
Sbjct: 415 PQQVPGFNPF--FLLHGNPFTGKTKAVEEVASLFSAPVFTISSYEFADATADHLEAKL-D 471
Query: 209 LFSKAYRTAP-SIVFIDEID--AIASKRENL 236
+F + +P +I+F+ ++D +I+S N+
Sbjct: 472 MFVQNVVKSPCAIIFVKDLDVLSISSDEGNI 502
Score = 56 (24.8 bits), Expect = 2.3e-58, Sum P(3) = 2.3e-58
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 660 SSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETF 699
+ D I F +L K+ PS+SE ++ RY+ + F
Sbjct: 908 NQDSLELRITKEDFLTSLKKLRPSISEQELHRYEMVRHQF 947
>UNIPROTKB|E1BPU3 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060152 "microtubule-based peroxisome localization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 PANTHER:PTHR23077:SF12 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 GeneTree:ENSGT00550000075032
EMBL:DAAA02009765 EMBL:DAAA02009763 EMBL:DAAA02009764
IPI:IPI00699088 Ensembl:ENSBTAT00000033872 Uniprot:E1BPU3
Length = 1281
Score = 508 (183.9 bits), Expect = 3.9e-58, Sum P(3) = 3.9e-58
Identities = 104/232 (44%), Positives = 145/232 (62%)
Query: 395 ERLTITMTDFEEATKMVQPSSRREGFSAIP-NVKWEDVGGLDYLRHEFDRYIVRRIKFPE 453
E L +T DF++A + P S R P ++ W+ +GGL +R I K+PE
Sbjct: 804 EELVLTTLDFQKALRGFTPVSLRNVNLHKPRDLGWDRIGGLHDVRQILVDTIQLPAKYPE 863
Query: 454 EYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRT 513
+ + TG LLYGPPG GKTL+A +A E+G NFI +KGPELL+KY+G SE AVR
Sbjct: 864 LFANLPIRQRTGVLLYGPPGTGKTLLAGVIARESGMNFISVKGPELLSKYIGASEQAVRD 923
Query: 514 LFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
+F RA+ PCILFFDE +++ +RG + V +R++NQLL +LDG + +GV+V+ AT+
Sbjct: 924 VFVRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATS 983
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
RPD++D A+LRPGR K +Y P P R IL L+ P+ D VDL +A
Sbjct: 984 RPDLIDPALLRPGRLDKCVYCPPPDQASRLEILNVLSESLPLADDVDLQHVA 1035
Score = 244 (91.0 bits), Expect = 2.7e-27, Sum P(3) = 2.7e-27
Identities = 51/128 (39%), Positives = 78/128 (60%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVP 185
+GG+ V + L + +P +P+L L +R G+LLYGPPG GKT LA IA E+G+
Sbjct: 841 IGGLHDVRQILVDTIQLPAKYPELFANLPIRQRTGVLLYGPPGTGKTLLAGVIARESGMN 900
Query: 186 FYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIV 245
F + E++S GASE+ +RD+F +A P I+F DE ++IA +R + + R+V
Sbjct: 901 FISVKGPELLSKYIGASEQAVRDVFVRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRVV 960
Query: 246 TQLMTCMD 253
QL+T +D
Sbjct: 961 NQLLTQLD 968
Score = 144 (55.7 bits), Expect = 2.7e-27, Sum P(3) = 2.7e-27
Identities = 29/66 (43%), Positives = 43/66 (65%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
V V+ AT+RPD +DPAL RPGR D+ + PD+ +R++IL+VL+ +L + DL +A
Sbjct: 976 VYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQASRLEILNVLSESLPLADDVDLQHVA 1035
Query: 338 RSTPGF 343
T F
Sbjct: 1036 SLTDSF 1041
Score = 101 (40.6 bits), Expect = 3.9e-58, Sum P(3) = 3.9e-58
Identities = 61/240 (25%), Positives = 100/240 (41%)
Query: 126 LGGMESV----LEELKMEVIV-PLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIAN 180
LGG+ S+ +E + ++ PL + G+R A +LL G G GK+ LA AI
Sbjct: 555 LGGVNSLGVSSMEHITHSLLGRPLSRQLVSLVAGLRNGA-LLLTGGKGSGKSTLAKAICK 613
Query: 181 ETGVPFYKISA-TEVVS--GVSGASEENIRDLFSKAYRTA----PSIVFIDEIDAIASKR 233
E F + A E++ + G ENI+ + A+ A PS+V +D++D + +
Sbjct: 614 EA---FDILDAHVEIIDCKALRGKRLENIQKTLAAAFSEALWRQPSVVLLDDLDLVVGRS 670
Query: 234 ENLQREMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPA 293
+ E + +S RL V +I + ++ P
Sbjct: 671 ALPEHEHSPEAI--------QSQRLAH--ALNDLVKEFISMGSLVALIATSQSQHSLHPL 720
Query: 294 L-RRPGRFDREIVLGV--PDENARVQILSVLTRNL------RVEGSFDLVKIARSTPGFV 344
L G + V + PD++ R +IL + +N R G DL +IA+ T GFV
Sbjct: 721 LVSAQGIHIFQCVQHIQPPDQDQRCEILHAIIKNKLDCDMKRFTG-LDLQRIAKETEGFV 779
Score = 53 (23.7 bits), Expect = 3.9e-58, Sum P(3) = 3.9e-58
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 664 TPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETFK 700
T I +H ALS PS+SE + + L E+F+
Sbjct: 1223 TSLAISQSHLMTALSHTRPSISEDDWKTFAELYESFQ 1259
>TAIR|locus:2159557 [details] [associations]
symbol:PEX1 "peroxisome 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0007031 "peroxisome organization"
evidence=IEA;RCA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA;IMP]
[GO:0016558 "protein import into peroxisome matrix"
evidence=RCA;IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005778 GO:GO:0006635 GO:GO:0016558
HSSP:Q01853 eggNOG:COG0464 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 EMBL:AB006697 EMBL:AF275382 IPI:IPI00541072
RefSeq:NP_196464.2 UniGene:At.8759 ProteinModelPortal:Q9FNP1
SMR:Q9FNP1 STRING:Q9FNP1 PaxDb:Q9FNP1 PRIDE:Q9FNP1
EnsemblPlants:AT5G08470.1 GeneID:830746 KEGG:ath:AT5G08470
TAIR:At5g08470 HOGENOM:HOG000030785 InParanoid:Q9FQ60 KO:K13338
OMA:AECISLP PhylomeDB:Q9FNP1 Genevestigator:Q9FNP1
PANTHER:PTHR23077:SF12 Uniprot:Q9FNP1
Length = 1130
Score = 514 (186.0 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 123/313 (39%), Positives = 164/313 (52%)
Query: 390 LPEEMERLTITMTDFEEATKMVQPSSRRE---GFSAIPNVKWEDVGGLDYLRHEFDRYIV 446
L + + + DF A P + R+ S + WEDVGG+ +++ I
Sbjct: 802 LESNISKYNLVKEDFTRAMHDFVPVAMRDITKSASEGGRLGWEDVGGVTDIKNAIKEMIE 861
Query: 447 RRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGE 506
KFP+ + + + L + LLYGPPGCGKT I A A FI +KGPELLNKY+G
Sbjct: 862 LPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGA 921
Query: 507 SELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGV 566
SE AVR +FS+A +PCILFFDE D++ KRG + V +R++NQ L ELDG + GV
Sbjct: 922 SEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGV 981
Query: 567 FVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 626
FV AT+RPD++D A+LRPGR +LL P+P ER IL L+RK + D +DL IA
Sbjct: 982 FVFAATSRPDLLDPALLRPGRLDRLLLCDFPSPPERLEILTVLSRKLLMADDIDLEPIAL 1041
Query: 627 SKFCENLSGXXXXXXXXXXXXXXXXXKLI-SSKSSSDVTPFTIKLTHFEQALSKISPSVS 685
E SG L K + TP I + SK PSVS
Sbjct: 1042 --MTEGFSGADLQALLSDAQLAAVHEYLNREDKPETGTTPI-ITDPLLKSIASKTKPSVS 1098
Query: 686 ELQIQR-YKTLSE 697
E + Q+ Y S+
Sbjct: 1099 ETEKQKLYDIYSQ 1111
Score = 234 (87.4 bits), Expect = 3.8e-26, Sum P(2) = 3.8e-26
Identities = 48/131 (36%), Positives = 77/131 (58%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++D+GG+ + +K + +P P++ +R + +LLYGPPGCGKT + A A
Sbjct: 843 WEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
+ F + E+++ GASE+ +RD+FSKA AP I+F DE D+IA KR + +
Sbjct: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDNTGVTD 962
Query: 243 RIVTQLMTCMD 253
R+V Q +T +D
Sbjct: 963 RVVNQFLTELD 973
Score = 149 (57.5 bits), Expect = 3.8e-26, Sum P(2) = 3.8e-26
Identities = 32/66 (48%), Positives = 41/66 (62%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
V V AT+RPD +DPAL RPGR DR ++ P R++IL+VL+R L + DL IA
Sbjct: 981 VFVFAATSRPDLLDPALLRPGRLDRLLLCDFPSPPERLEILTVLSRKLLMADDIDLEPIA 1040
Query: 338 RSTPGF 343
T GF
Sbjct: 1041 LMTEGF 1046
Score = 114 (45.2 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 57/236 (24%), Positives = 99/236 (41%)
Query: 121 PRFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVR--PMAG-ILLYGPPGCGKTKLAHA 177
P L M ++ ++ + V L P W P G IL+YGPPG GKT LA A
Sbjct: 554 PDISSLTWMGPIVSDVIKRMTV-LLSPAAGMWFSKFKIPSPGHILIYGPPGSGKTILARA 612
Query: 178 IANETGVPFYKISATEVVSGVSGASE--ENIRDLFS----KAYRTAPSIVFIDEIDAI-- 229
A ++ +VS + A E ++I + S + APS++ +D++D+I
Sbjct: 613 AAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAEGLEHAPSVIILDDLDSIIS 672
Query: 230 -ASKRENLQREMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPD 288
+S E Q + ++T+ +T + + + G G + + + +
Sbjct: 673 SSSDTEGTQASVGVTMLTKFLTDVIDDY-----GEYRNSSCGI----GPLAFVASVQSLE 723
Query: 289 AVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFD-LVKIARSTPGF 343
+ L GRFD + L P + R IL + ++ S D L+ +A G+
Sbjct: 724 QIPQTLSSSGRFDFHVQLAAPATSERGAILKHEIQKRLLDCSEDILLNLAAKCEGY 779
>RGD|1559939 [details] [associations]
symbol:Pex1 "peroxisomal biogenesis factor 1" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005777
"peroxisome" evidence=ISO] [GO:0005778 "peroxisomal membrane"
evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008022
"protein C-terminus binding" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0016558 "protein import into
peroxisome matrix" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IEA;ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA;ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382 RGD:1559939
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 OrthoDB:EOG4JM7P2 EMBL:CH474013
IPI:IPI00777820 RefSeq:NP_001102690.1 UniGene:Rn.162727
Ensembl:ENSRNOT00000038136 GeneID:500006 KEGG:rno:500006
UCSC:RGD:1559939 NextBio:704745 Uniprot:D3ZZB2
Length = 1283
Score = 515 (186.3 bits), Expect = 6.7e-57, Sum P(3) = 6.7e-57
Identities = 106/232 (45%), Positives = 148/232 (63%)
Query: 395 ERLTITMTDFEEATKMVQPSSRREGFSAIP-NVKWEDVGGLDYLRHEFDRYIVRRIKFPE 453
E LT+T DF++A + P+S R P ++ W+ +GGL +R I K+PE
Sbjct: 805 EGLTLTTADFQKALRGFLPASLRNVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPE 864
Query: 454 EYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRT 513
+ + TG LLYGPPG GKTL+A VA E+G NFI I+GPELL+KY+G SE AVR
Sbjct: 865 LFANLPIRQRTGILLYGPPGTGKTLLAGVVARESGMNFISIQGPELLSKYIGASEQAVRD 924
Query: 514 LFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
+F RA+ PCILFFDE +++ +RG + V +R++NQLL +LDG + +GV+V+ AT+
Sbjct: 925 VFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATS 984
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
RPD++D A+LRPGR K +Y P P R IL L++ P+ D VDL +A
Sbjct: 985 RPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILTVLSKSLPLADDVDLQHVA 1036
Score = 246 (91.7 bits), Expect = 1.3e-27, Sum P(3) = 1.3e-27
Identities = 52/128 (40%), Positives = 78/128 (60%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVP 185
+GG+ V + L + +P +P+L L +R GILLYGPPG GKT LA +A E+G+
Sbjct: 842 IGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVVARESGMN 901
Query: 186 FYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIV 245
F I E++S GASE+ +RD+F +A P I+F DE ++IA +R + + R+V
Sbjct: 902 FISIQGPELLSKYIGASEQAVRDVFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRVV 961
Query: 246 TQLMTCMD 253
QL+T +D
Sbjct: 962 NQLLTQLD 969
Score = 145 (56.1 bits), Expect = 1.3e-27, Sum P(3) = 1.3e-27
Identities = 29/66 (43%), Positives = 44/66 (66%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
V V+ AT+RPD +DPAL RPGR D+ + PD+ +R++IL+VL+++L + DL +A
Sbjct: 977 VYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILTVLSKSLPLADDVDLQHVA 1036
Query: 338 RSTPGF 343
T F
Sbjct: 1037 SVTESF 1042
Score = 82 (33.9 bits), Expect = 6.7e-57, Sum P(3) = 6.7e-57
Identities = 60/238 (25%), Positives = 97/238 (40%)
Query: 126 LGGMESV----LEELKMEVIV-PLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIAN 180
LGG+ S+ +E + ++ PL + G+R A +L+ G G GK+ LA AI
Sbjct: 556 LGGVSSLSVSAMEHITHSLLGRPLSRQLMALVAGLRNGA-LLITGGKGSGKSTLAKAICK 614
Query: 181 ETGVPFYKISATEVVS--GVSGASEENIRDL----FSKAYRTAPSIVFIDEIDAIASKRE 234
E + E+V + G E+I+ FS+A PS++ +D++D IA
Sbjct: 615 EAHDALD--AHVEMVDCKALRGKRLESIQKALEVAFSEAAWRQPSVILLDDLDLIAGLPS 672
Query: 235 NLQREMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPAL 294
+ E V +S RL V +I + ++ P+L
Sbjct: 673 TPEHEHSPEAV--------QSQRLAH--ALNNMIKEFVSMGSLVALIATSQLQHSLHPSL 722
Query: 295 -RRPGRFDREIVLGV--PDENARVQIL-SVLTRNLRVEGS----FDLVKIARSTPGFV 344
G + + + PD+ R +IL SV+ L + S DL IA+ T FV
Sbjct: 723 VSAQGVHTFQCIQHIQPPDQEQRCEILHSVVKNKLGCDISKSPDLDLKCIAKETEAFV 780
Score = 53 (23.7 bits), Expect = 6.7e-57, Sum P(3) = 6.7e-57
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 664 TPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETFK 700
T F I H AL+ PS++E + + + L E F+
Sbjct: 1225 TSFAISQAHLMTALAHTRPSINEDEGKEFAELYENFQ 1261
Score = 40 (19.1 bits), Expect = 1.5e-55, Sum P(3) = 1.5e-55
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 677 LSKISPSVSELQIQRYKTLSETFKAA 702
LSK P ++ +Q +++E+F A
Sbjct: 1020 LSKSLPLADDVDLQHVASVTESFTGA 1045
>DICTYBASE|DDB_G0292788 [details] [associations]
symbol:pex6 "peroxin 6" species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007031 "peroxisome
organization" evidence=IEA;ISS] [GO:0005777 "peroxisome"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292788 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0005777 GO:GO:0007031 GO:GO:0005778 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AAFI02000196 KO:K13339
RefSeq:XP_629463.1 ProteinModelPortal:Q54CS8
EnsemblProtists:DDB0238049 GeneID:8628853 KEGG:ddi:DDB_G0292788
OMA:ANRIKIS Uniprot:Q54CS8
Length = 1201
Score = 591 (213.1 bits), Expect = 2.1e-56, P = 2.1e-56
Identities = 148/438 (33%), Positives = 232/438 (52%)
Query: 277 YVLVIGAT-NRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVE-GSFDLV 334
Y L+I T N D + +R F EI L PDEN R +IL LT+NL ++ G+ +
Sbjct: 778 YPLIITVTVNSMDELSNKVRN--WFKHEITLNSPDENQRFKILKYLTKNLPIDIGNTVSI 835
Query: 335 K-IARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEE 393
K ++ T F+ +KR++ SI + +D+ P E
Sbjct: 836 KNLSIRTASFLNSNLRALIQRSSINALKRVL----------SIQQMMNDEI-----KPIE 880
Query: 394 MER--LTITMTDFEEA-TKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIK 450
+ + D +++ ++M + S G IPNV W+DVGGL ++ E I ++
Sbjct: 881 IYNCGFLVMGDDIQKSLSEMQEYQSSSIGAPKIPNVSWDDVGGLANVKSEIMDTIQLPLE 940
Query: 451 FPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELA 510
P + G+ +G LL+GPPG GKTL+AKA+A E NF+ +KGPEL+N Y+GESE
Sbjct: 941 HPHLFAS-GIGKRSGILLFGPPGTGKTLLAKAIATECSLNFLSVKGPELINMYIGESEKN 999
Query: 511 VRTLFSRARTCSPCILFFDEVDALTTKRGK--EGGWVVERLLNQLLIELDGADKRKGVFV 568
+R +F++AR PC++FFDE+D+L RG + G V++R+++QLL ELDG K VF+
Sbjct: 1000 IREIFNKARQAKPCVIFFDELDSLAPSRGNGADSGGVMDRVVSQLLAELDGMQKSSDVFI 1059
Query: 569 IGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGL-ILEALARKKPIDDSVDLHTIAQS 627
IGATNRPD++D +++RPGR +LLY+ + + E IL+AL RK + D VDL + ++
Sbjct: 1060 IGATNRPDLLDSSLMRPGRLDRLLYLGISSEKENQFKILQALTRKFNLADDVDLRKVVEN 1119
Query: 628 KFCE-NLSGXXXXXXXXXXXXXXXXXKLISS-----KSSSDVTPFTIKLTHFEQALSKIS 681
C NL+G ++ +S + HF +A++ +
Sbjct: 1120 --CPMNLTGADFYALASDAMSNAFHERITASINGEINEEEQNQKLIVYQNHFIKAVNSLV 1177
Query: 682 PSVSELQIQRYKTLSETF 699
PSVS +++ Y + + F
Sbjct: 1178 PSVSLDELEYYHKVQKQF 1195
Score = 340 (124.7 bits), Expect = 2.4e-27, P = 2.4e-27
Identities = 81/222 (36%), Positives = 122/222 (54%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+ +V E+ + +PL HP L G+ +GILL+GPPG GKT LA AIA E
Sbjct: 918 WDDVGGLANVKSEIMDTIQLPLEHPHLFA-SGIGKRSGILLFGPPGTGKTLLAKAIATEC 976
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQRE--M 240
+ F + E+++ G SE+NIR++F+KA + P ++F DE+D++A R N +
Sbjct: 977 SLNFLSVKGPELINMYIGESEKNIREIFNKARQAKPCVIFFDELDSLAPSRGNGADSGGV 1036
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRF 300
R+V+QL+ +D + V +IGATNRPD +D +L RPGR
Sbjct: 1037 MDRVVSQLLAELDGMQKSSD-----------------VFIIGATNRPDLLDSSLMRPGRL 1079
Query: 301 DREIVLGVPDENA-RVQILSVLTRNLRVEGSFDLVKIARSTP 341
DR + LG+ E + +IL LTR + DL K+ + P
Sbjct: 1080 DRLLYLGISSEKENQFKILQALTRKFNLADDVDLRKVVENCP 1121
Score = 166 (63.5 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 49/208 (23%), Positives = 95/208 (45%)
Query: 161 ILLYGPPGCGKTKLAHAIANETGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSI 220
+LL GP G GK L + +A + G+ Y++ ++ V + NIR++ +A + P++
Sbjct: 670 LLLNGPQGVGKRTLLNRVAKQMGIHVYEVDCYKLYDFVESKKDWNIRNVLEQASNSTPTL 729
Query: 221 VFIDEIDAIASKRENLQREMERRIVTQ-LMTCMDESHRLVQPGXXXXXXXXXXXXPGYVL 279
+ + + + +++Q+E + ++Q L+ + + + Y L
Sbjct: 730 LILKNFEVLEQTAQSMQQEKKESNLSQTLINILKDIN---------DSNTSNINSNKYPL 780
Query: 280 VIGAT-NRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVE-GSFDLVK-I 336
+I T N D + +R F EI L PDEN R +IL LT+NL ++ G+ +K +
Sbjct: 781 IITVTVNSMDELSNKVRN--WFKHEITLNSPDENQRFKILKYLTKNLPIDIGNTVSIKNL 838
Query: 337 ARSTPGFVXXXXXXXXXXXXXXXMKRII 364
+ T F+ +KR++
Sbjct: 839 SIRTASFLNSNLRALIQRSSINALKRVL 866
>UNIPROTKB|E1BY08 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042623 "ATPase activity,
coupled" evidence=IEA] [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 OMA:HSWEKEK InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AADN02000702 EMBL:AADN02000703
IPI:IPI00602002 RefSeq:XP_418655.2 UniGene:Gga.2955
ProteinModelPortal:E1BY08 Ensembl:ENSGALT00000015329 GeneID:420554
KEGG:gga:420554 NextBio:20823448 Uniprot:E1BY08
Length = 1290
Score = 500 (181.1 bits), Expect = 2.6e-56, Sum P(3) = 2.6e-56
Identities = 102/230 (44%), Positives = 146/230 (63%)
Query: 397 LTITMTDFEEATKMVQPSSRREGFSAIP-NVKWEDVGGLDYLRHEFDRYIVRRIKFPEEY 455
L ++ DF++A K P + R P ++ W+ +GGL +R I+ K+PE +
Sbjct: 815 LNLSTVDFQKALKDFTPLALRNVSLHKPKDIGWDRIGGLKDVRQILMDTIMLPAKYPELF 874
Query: 456 EEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLF 515
+ +G LLYG PG GKTL+A VA E+G NFI +KGPELL+KY+G SE AVR +F
Sbjct: 875 ANLPIRQRSGVLLYGAPGTGKTLLAGVVARESGMNFISVKGPELLSKYIGASEQAVRDIF 934
Query: 516 SRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRP 575
SRA+ PCI+FFDE D++ +RG + V +R++NQLL +LDG + +GV+V+ AT+RP
Sbjct: 935 SRAQAAKPCIVFFDEFDSIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRP 994
Query: 576 DVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
D++D A+LRPGR K LY P P R IL+AL+ + + VDL +A
Sbjct: 995 DLIDPALLRPGRLDKCLYCPPPDQSSRCEILKALSHSLSLANDVDLEYLA 1044
Score = 256 (95.2 bits), Expect = 5.8e-27, Sum P(3) = 5.8e-27
Identities = 52/128 (40%), Positives = 81/128 (63%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVP 185
+GG++ V + L +++P +P+L L +R +G+LLYG PG GKT LA +A E+G+
Sbjct: 850 IGGLKDVRQILMDTIMLPAKYPELFANLPIRQRSGVLLYGAPGTGKTLLAGVVARESGMN 909
Query: 186 FYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIV 245
F + E++S GASE+ +RD+FS+A P IVF DE D+IA +R + + R+V
Sbjct: 910 FISVKGPELLSKYIGASEQAVRDIFSRAQAAKPCIVFFDEFDSIAPRRGHDNTGVTDRVV 969
Query: 246 TQLMTCMD 253
QL+T +D
Sbjct: 970 NQLLTQLD 977
Score = 139 (54.0 bits), Expect = 5.8e-27, Sum P(3) = 5.8e-27
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
V V+ AT+RPD +DPAL RPGR D+ + PD+++R +IL L+ +L + DL +A
Sbjct: 985 VYVLAATSRPDLIDPALLRPGRLDKCLYCPPPDQSSRCEILKALSHSLSLANDVDLEYLA 1044
Query: 338 RSTPGF 343
T F
Sbjct: 1045 AKTEHF 1050
Score = 103 (41.3 bits), Expect = 2.6e-56, Sum P(3) = 2.6e-56
Identities = 63/244 (25%), Positives = 102/244 (41%)
Query: 122 RFQDLGGME----SVLEELKMEVIV-PLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAH 176
R LGG++ S E + ++ PL +G+R G+LL G G GK+ LA
Sbjct: 560 RLNHLGGVDKLGTSSFEHISHSLLGRPLSQKLAGIAVGLRS-GGVLLTGGKGSGKSTLAK 618
Query: 177 AIANETGVPFYKISA-TEVVSGVS------GASEENIRDLFSKAYRTAPSIVFIDEIDAI 229
AI E F ++ A EV+ + G +N+ + F +A PSI+ +D++D I
Sbjct: 619 AICKEA---FDRLDAHVEVIDCKALRGKRLGNIRKNVEEAFLEASWRQPSIILLDDLDHI 675
Query: 230 ASKRENLQREMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPD- 288
+ E V +S RL G ++ + AT++ +
Sbjct: 676 VGVPPTPEHENSPETV--------QSSRLAY---VLKDLIKEVISLGSLIALIATSQSEH 724
Query: 289 AVDPAL-RRPGR--FDREIVLGVPDENARVQIL-SVLTRNLRVE----GSFDLVKIARST 340
A+ P+L G F + PD+ R ++L SV+ L + DL +A+ T
Sbjct: 725 ALHPSLVSAQGTHIFQCFKCIQSPDQKQRCEMLCSVIKNKLNCDVKKFSDLDLQYVAKET 784
Query: 341 PGFV 344
GFV
Sbjct: 785 EGFV 788
Score = 42 (19.8 bits), Expect = 2.6e-56, Sum P(3) = 2.6e-56
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 668 IKLTHFEQALSKISPSVSELQIQRYKTLSETFK 700
I +H AL I PS+S+ + + L + F+
Sbjct: 1237 ITQSHLMTALEGIRPSISQDDWKNFTELYDNFQ 1269
>MGI|MGI:1918632 [details] [associations]
symbol:Pex1 "peroxisomal biogenesis factor 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005777 "peroxisome" evidence=ISO;IDA]
[GO:0005778 "peroxisomal membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006625 "protein targeting to
peroxisome" evidence=ISO] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0008289 "lipid
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0042623 "ATPase
activity, coupled" evidence=ISO] [GO:0060152 "microtubule-based
peroxisome localization" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1918632 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005777 GO:GO:0005778 GO:GO:0008289
GO:GO:0016558 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0060152 KO:K13338
PANTHER:PTHR23077:SF12 CTD:5189 HOVERGEN:HBG008169 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 EMBL:BC090845 EMBL:AK017309
EMBL:AK149599 IPI:IPI00136789 IPI:IPI00653755 RefSeq:NP_082053.1
UniGene:Mm.379196 PDB:1WLF PDBsum:1WLF ProteinModelPortal:Q5BL07
SMR:Q5BL07 STRING:Q5BL07 PhosphoSite:Q5BL07 PaxDb:Q5BL07
PRIDE:Q5BL07 Ensembl:ENSMUST00000006061 Ensembl:ENSMUST00000121291
GeneID:71382 KEGG:mmu:71382 UCSC:uc008whf.1
GeneTree:ENSGT00550000075032 HOGENOM:HOG000252959 InParanoid:Q5BL07
OrthoDB:EOG4JM7P2 EvolutionaryTrace:Q5BL07 NextBio:333669
Bgee:Q5BL07 CleanEx:MM_PEX1 Genevestigator:Q5BL07 Uniprot:Q5BL07
Length = 1284
Score = 512 (185.3 bits), Expect = 2.9e-56, Sum P(3) = 2.9e-56
Identities = 106/232 (45%), Positives = 148/232 (63%)
Query: 395 ERLTITMTDFEEATKMVQPSSRREGFSAIP-NVKWEDVGGLDYLRHEFDRYIVRRIKFPE 453
E LT+T +DF++A + P+S R P ++ W+ +GGL +R I K+PE
Sbjct: 806 EDLTLTTSDFQKALRGFLPASLRNVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPE 865
Query: 454 EYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRT 513
+ + TG LLYGPPG GKTL+A VA E+G NFI IKGPELL+KY+G SE AVR
Sbjct: 866 LFANLPIRQRTGILLYGPPGTGKTLLAGVVARESGMNFISIKGPELLSKYIGASEQAVRD 925
Query: 514 LFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
+F RA+ PCILFFDE +++ +RG + V +R++NQLL +LDG + +GV+V+ AT+
Sbjct: 926 VFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATS 985
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
RPD++D A+LRPGR K +Y P P R IL L++ + D VDL +A
Sbjct: 986 RPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILTVLSKSLALADDVDLQHVA 1037
Score = 246 (91.7 bits), Expect = 5.0e-28, Sum P(3) = 5.0e-28
Identities = 52/128 (40%), Positives = 78/128 (60%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVP 185
+GG+ V + L + +P +P+L L +R GILLYGPPG GKT LA +A E+G+
Sbjct: 843 IGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVVARESGMN 902
Query: 186 FYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIV 245
F I E++S GASE+ +RD+F +A P I+F DE ++IA +R + + R+V
Sbjct: 903 FISIKGPELLSKYIGASEQAVRDVFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRVV 962
Query: 246 TQLMTCMD 253
QL+T +D
Sbjct: 963 NQLLTQLD 970
Score = 146 (56.5 bits), Expect = 5.0e-28, Sum P(3) = 5.0e-28
Identities = 29/66 (43%), Positives = 44/66 (66%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
V V+ AT+RPD +DPAL RPGR D+ + PD+ +R++IL+VL+++L + DL +A
Sbjct: 978 VYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILTVLSKSLALADDVDLQHVA 1037
Query: 338 RSTPGF 343
T F
Sbjct: 1038 SVTDSF 1043
Score = 76 (31.8 bits), Expect = 2.9e-56, Sum P(3) = 2.9e-56
Identities = 59/236 (25%), Positives = 92/236 (38%)
Query: 126 LGGME----SVLEELKMEVIV-PLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIAN 180
LGG+ S +E + ++ PL + G+R A +L+ G G GK+ A AI
Sbjct: 557 LGGVSALGASAMEHITHSLLGRPLSRQLMALVAGLRNGA-LLITGGKGSGKSTFAKAICK 615
Query: 181 ETGVPFYKISATEVVSGVSGASEENIRDL----FSKAYRTAPSIVFIDEIDAIASKRENL 236
E T + G E+I+ FS+A PS++ +D++D IA
Sbjct: 616 EAQDTLDARVETVDCKALRGKRLESIQKALEVAFSEAAWRQPSVILLDDLDLIAGLPSVP 675
Query: 237 QREMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPAL-R 295
++E V +S RL V +I + ++ P+L
Sbjct: 676 EQEHSPEAV--------QSQRLAH--ALNDMIKEFVSTGSLVALIATSQLQQSLHPSLVS 725
Query: 296 RPGRFDREIV--LGVPDENARVQIL-SVLTRNLRVEGS----FDLVKIARSTPGFV 344
G + V L P+ R +IL SV+ L + S DL IA+ T FV
Sbjct: 726 AQGIHTFQCVQHLQPPNPEQRCEILHSVVKNKLGCDISNFPDLDLQCIAKDTEAFV 781
Score = 56 (24.8 bits), Expect = 2.9e-56, Sum P(3) = 2.9e-56
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 664 TPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETFK 700
T F I H AL+ PS+SE + + + L E F+
Sbjct: 1226 TTFAISQAHLMTALAHTRPSISEDEGKEFAELYENFQ 1262
>FB|FBgn0033564 [details] [associations]
symbol:Pex6 "Peroxin 6" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization"
evidence=ISS;IMP] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:AE013599
GO:GO:0005524 GO:GO:0007031 HSSP:Q01853 eggNOG:COG0464
GO:GO:0017111 KO:K13339 GeneTree:ENSGT00550000074953
UniGene:Dm.6792 EMBL:AY058375 RefSeq:NP_001027403.1
RefSeq:NP_001163114.1 SMR:Q9V5R2 EnsemblMetazoa:FBtr0100498
EnsemblMetazoa:FBtr0301705 GeneID:3772165 KEGG:dme:Dmel_CG11919
UCSC:CG11919-RA FlyBase:FBgn0033564 InParanoid:Q9V5R2 OMA:KANIFLY
OrthoDB:EOG4DR7T7 NextBio:852681 Uniprot:Q9V5R2
Length = 897
Score = 508 (183.9 bits), Expect = 4.8e-56, Sum P(2) = 4.8e-56
Identities = 118/318 (37%), Positives = 177/318 (55%)
Query: 396 RLTITMTDF-EEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEE 454
R T+ M+ F + T M + G +P V W D+GGL L+ E I +K
Sbjct: 582 RTTLDMSHFAKNLTDMQSSFADSLGAPKVPKVYWSDIGGLAKLKDEIQSSIGLPLK---H 638
Query: 455 YEEFGVDLE-TGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRT 513
G +L +G LLYGPPG GKTL+AKAVA E +F+ ++GPELLN YVG+SE VR
Sbjct: 639 VHLMGKNLRRSGILLYGPPGTGKTLVAKAVATECNLSFLSVQGPELLNMYVGQSEQNVRE 698
Query: 514 LFSRARTCSPCILFFDEVDALTTKRGKEG--GWVVERLLNQLLIELDG---ADKRKGVFV 568
+FSRAR+ +PC+LF DE+D+L RG G G V++R+++QLL E+DG D K +F+
Sbjct: 699 VFSRARSAAPCVLFLDELDSLAPNRGVAGDSGGVMDRVVSQLLAEMDGMSDGDTSKPIFI 758
Query: 569 IGATNRPDVMDRAVLRPGRFGKLLYV-PLPTPDERGLILEALARKKPIDDSVDLHTIAQS 627
+ ATNRPD++D A+LRPGRF KL YV P T +++ +L A ++ +D VD+ IA+
Sbjct: 759 LAATNRPDLIDPALLRPGRFDKLFYVGPCSTAEDKAAVLRAQTQRFALDAGVDMEQIAE- 817
Query: 628 KFCENLSGXXXXXXXX----XXXXXXXXXKLISSKSSSDVTPFTIKLTH--FEQALSKIS 681
+ +SG L + S ++ P + + F ++ +K
Sbjct: 818 RLKSEMSGADLYSICSNAWLSAVRRTIDGHLSGTISEKELVPENVIVQEEDFTKSFNKFV 877
Query: 682 PSVSELQIQRYKTLSETF 699
PS+S ++ + L ++
Sbjct: 878 PSISAKDLEYFNNLKASY 895
Score = 308 (113.5 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 75/219 (34%), Positives = 122/219 (55%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+ + +E++ + +PL H L +R +GILLYGPPG GKT +A A+A E
Sbjct: 615 WSDIGGLAKLKDEIQSSIGLPLKHVHL-MGKNLR-RSGILLYGPPGTGKTLVAKAVATEC 672
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR--ENLQREM 240
+ F + E+++ G SE+N+R++FS+A AP ++F+DE+D++A R +
Sbjct: 673 NLSFLSVQGPELLNMYVGQSEQNVREVFSRARSAAPCVLFLDELDSLAPNRGVAGDSGGV 732
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRF 300
R+V+QL+ MD + G P + ++ ATNRPD +DPAL RPGRF
Sbjct: 733 MDRVVSQLLAEMDG----MSDGDTSK--------P--IFILAATNRPDLIDPALLRPGRF 778
Query: 301 DREIVLGVPDENA--RVQILSVLTRNLRVEGSFDLVKIA 337
D+ +G P A + +L T+ ++ D+ +IA
Sbjct: 779 DKLFYVG-PCSTAEDKAAVLRAQTQRFALDAGVDMEQIA 816
Score = 125 (49.1 bits), Expect = 0.00041, P = 0.00041
Identities = 40/160 (25%), Positives = 80/160 (50%)
Query: 466 FLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCI 525
FLL G G GK+ + AVA E G + E++++ +E+ ++ +F++++ C P +
Sbjct: 364 FLLQGERGSGKSKLVSAVAQELGMHIYGADCAEIVSQVPSHTEMKLKAVFAKSQVCEPLM 423
Query: 526 LFFDEVDALTTKRGKEGGWVVERLLNQLLI---ELDGADKRKGVFVIGATNRPDVMDRAV 582
+ F + EG + RLL+ + EL D++ + V+ T+ DR
Sbjct: 424 ICFHNFEIFGIDN--EGNEDL-RLLSAFHVQVQELFNRDRKHPIVVVALTS-----DRH- 474
Query: 583 LRP---GRFGKLLYVPLPTPDERGLILEALARKKPIDDSV 619
L+P G F +++ + +P+ +ER IL + ++ +D +
Sbjct: 475 LKPMIQGLFLEIINIDMPSKEERFEILRWMHVRETFNDII 514
Score = 102 (41.0 bits), Expect = 4.8e-56, Sum P(2) = 4.8e-56
Identities = 30/101 (29%), Positives = 49/101 (48%)
Query: 162 LLYGPPGCGKTKLAHAIANETGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIV 221
LL G G GK+KL A+A E G+ Y E+VS V +E ++ +F+K+ P ++
Sbjct: 365 LLQGERGSGKSKLVSAVAQELGMHIYGADCAEIVSQVPSHTEMKLKAVFAKSQVCEPLMI 424
Query: 222 FID--EIDAIASK-RENLQREMERRIVTQLMTCMDESHRLV 259
EI I ++ E+L+ + Q + D H +V
Sbjct: 425 CFHNFEIFGIDNEGNEDLRLLSAFHVQVQELFNRDRKHPIV 465
Score = 43 (20.2 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 360 MKRIIDQRKSELSGNSIAEQHSDDW 384
M++I ++ KSE+SG + S+ W
Sbjct: 812 MEQIAERLKSEMSGADLYSICSNAW 836
>CGD|CAL0005974 [details] [associations]
symbol:PEX6 species:5476 "Candida albicans" [GO:0006631
"fatty acid metabolic process" evidence=ISO] [GO:0006625 "protein
targeting to peroxisome" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0046982 "protein heterodimerization
activity" evidence=IEA;ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0001302
"replicative cell aging" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 558 (201.5 bits), Expect = 1.1e-55, Sum P(2) = 1.1e-55
Identities = 111/212 (52%), Positives = 146/212 (68%)
Query: 419 GFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTL 478
G IPNVKWED+GGLD ++ E I +K PE + G+ +G L YGPPG GKTL
Sbjct: 805 GAPRIPNVKWEDIGGLDLVKDEILDTIDMPLKHPELFNN-GLKKRSGILFYGPPGTGKTL 863
Query: 479 IAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR 538
+AKA+A NF +KGPELLN Y+GESE VR +F RAR PC++FFDE+D++ KR
Sbjct: 864 LAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAKPCVIFFDELDSVAPKR 923
Query: 539 GKEG--GWVVERLLNQLLIELDGADKR--KGVFVIGATNRPDVMDRAVLRPGRFGKLLYV 594
G +G G V++R+++QLL ELDG GVFV+GATNRPD++D A+LRPGRF K+LY+
Sbjct: 924 GNQGDSGGVMDRIVSQLLAELDGMSSEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYL 983
Query: 595 PLPTPDERGL-ILEALARKKPIDDSVDLHTIA 625
+ DE+ ILEAL RK +DD+V+L +A
Sbjct: 984 GISDTDEKQTKILEALTRKFKLDDNVNLEQVA 1015
Score = 365 (133.5 bits), Expect = 3.7e-30, P = 3.7e-30
Identities = 98/329 (29%), Positives = 164/329 (49%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
+++D+GG++ V +E+ + +PL HP+L G++ +GIL YGPPG GKT LA AIA
Sbjct: 813 KWEDIGGLDLVKDEILDTIDMPLKHPELFN-NGLKKRSGILFYGPPGTGKTLLAKAIATN 871
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQRE-- 239
+ F+ + E+++ G SE N+R +F +A P ++F DE+D++A KR N
Sbjct: 872 FSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAKPCVIFFDELDSVAPKRGNQGDSGG 931
Query: 240 MERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
+ RIV+QL+ +D + G V V+GATNRPD +D AL RPGR
Sbjct: 932 VMDRIVSQLLAELDG---MSSEGGDG------------VFVVGATNRPDLLDEALLRPGR 976
Query: 300 FDREIVLGVPD-ENARVQILSVLTRNLRVEGSFDLVKIA-RSTPGFVXXXXXXXXXXXXX 357
FD+ + LG+ D + + +IL LTR +++ + +L ++A + + F
Sbjct: 977 FDKMLYLGISDTDEKQTKILEALTRKFKLDDNVNLEQVAAKCSFTFTGADFYALCSDSML 1036
Query: 358 XXMKRIIDQ--RKSELSGNSIAEQHSDD----WWRQPWLPEEMERLTITMTDFEEATKMV 411
M R+ ++ K + + +Q + WW E+ + + M DF +A +
Sbjct: 1037 NAMTRVANEVDEKIKQYNLQLTQQGKETVNTRWWFDNVATEQDTTVLVQMEDFIKAQNEL 1096
Query: 412 QPSSRREGFSAIPNVKWEDVGGLDYLRHE 440
PS E V+ GG + + +
Sbjct: 1097 IPSVSAEELQHYLKVRENFEGGKEKAKQQ 1125
Score = 54 (24.1 bits), Expect = 1.1e-55, Sum P(2) = 1.1e-55
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 664 TPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETFK 700
T +++ F +A +++ PSVS ++Q Y + E F+
Sbjct: 1080 TTVLVQMEDFIKAQNELIPSVSAEELQHYLKVRENFE 1116
>UNIPROTKB|Q59ZE6 [details] [associations]
symbol:PEX6 "Likely peroxisomal biogenesis AAA ATPase Pex6"
species:237561 "Candida albicans SC5314" [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 558 (201.5 bits), Expect = 1.1e-55, Sum P(2) = 1.1e-55
Identities = 111/212 (52%), Positives = 146/212 (68%)
Query: 419 GFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTL 478
G IPNVKWED+GGLD ++ E I +K PE + G+ +G L YGPPG GKTL
Sbjct: 805 GAPRIPNVKWEDIGGLDLVKDEILDTIDMPLKHPELFNN-GLKKRSGILFYGPPGTGKTL 863
Query: 479 IAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR 538
+AKA+A NF +KGPELLN Y+GESE VR +F RAR PC++FFDE+D++ KR
Sbjct: 864 LAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAKPCVIFFDELDSVAPKR 923
Query: 539 GKEG--GWVVERLLNQLLIELDGADKR--KGVFVIGATNRPDVMDRAVLRPGRFGKLLYV 594
G +G G V++R+++QLL ELDG GVFV+GATNRPD++D A+LRPGRF K+LY+
Sbjct: 924 GNQGDSGGVMDRIVSQLLAELDGMSSEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYL 983
Query: 595 PLPTPDERGL-ILEALARKKPIDDSVDLHTIA 625
+ DE+ ILEAL RK +DD+V+L +A
Sbjct: 984 GISDTDEKQTKILEALTRKFKLDDNVNLEQVA 1015
Score = 365 (133.5 bits), Expect = 3.7e-30, P = 3.7e-30
Identities = 98/329 (29%), Positives = 164/329 (49%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
+++D+GG++ V +E+ + +PL HP+L G++ +GIL YGPPG GKT LA AIA
Sbjct: 813 KWEDIGGLDLVKDEILDTIDMPLKHPELFN-NGLKKRSGILFYGPPGTGKTLLAKAIATN 871
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQRE-- 239
+ F+ + E+++ G SE N+R +F +A P ++F DE+D++A KR N
Sbjct: 872 FSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAKPCVIFFDELDSVAPKRGNQGDSGG 931
Query: 240 MERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
+ RIV+QL+ +D + G V V+GATNRPD +D AL RPGR
Sbjct: 932 VMDRIVSQLLAELDG---MSSEGGDG------------VFVVGATNRPDLLDEALLRPGR 976
Query: 300 FDREIVLGVPD-ENARVQILSVLTRNLRVEGSFDLVKIA-RSTPGFVXXXXXXXXXXXXX 357
FD+ + LG+ D + + +IL LTR +++ + +L ++A + + F
Sbjct: 977 FDKMLYLGISDTDEKQTKILEALTRKFKLDDNVNLEQVAAKCSFTFTGADFYALCSDSML 1036
Query: 358 XXMKRIIDQ--RKSELSGNSIAEQHSDD----WWRQPWLPEEMERLTITMTDFEEATKMV 411
M R+ ++ K + + +Q + WW E+ + + M DF +A +
Sbjct: 1037 NAMTRVANEVDEKIKQYNLQLTQQGKETVNTRWWFDNVATEQDTTVLVQMEDFIKAQNEL 1096
Query: 412 QPSSRREGFSAIPNVKWEDVGGLDYLRHE 440
PS E V+ GG + + +
Sbjct: 1097 IPSVSAEELQHYLKVRENFEGGKEKAKQQ 1125
Score = 54 (24.1 bits), Expect = 1.1e-55, Sum P(2) = 1.1e-55
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 664 TPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETFK 700
T +++ F +A +++ PSVS ++Q Y + E F+
Sbjct: 1080 TTVLVQMEDFIKAQNELIPSVSAEELQHYLKVRENFE 1116
>UNIPROTKB|E2RLT2 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AAEX03009307 RefSeq:XP_532459.1
ProteinModelPortal:E2RLT2 Ensembl:ENSCAFT00000003132 GeneID:475227
KEGG:cfa:475227 NextBio:20851103 Uniprot:E2RLT2
Length = 1267
Score = 501 (181.4 bits), Expect = 1.6e-55, Sum P(3) = 1.6e-55
Identities = 103/232 (44%), Positives = 145/232 (62%)
Query: 395 ERLTITMTDFEEATKMVQPSSRREGFSAIP-NVKWEDVGGLDYLRHEFDRYIVRRIKFPE 453
E L +T DF++A + P+S R P ++ W+ +GGL +R I K+PE
Sbjct: 789 EELVLTTLDFQKALQGFIPASLRNVNLHKPRDLGWDKIGGLHEVRQILWDTIQLPAKYPE 848
Query: 454 EYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRT 513
+ + G LLYGPPG GKTL+A +A E+G NFI +KGPELL+KY+G SE AVR
Sbjct: 849 LFANLPIRQRMGVLLYGPPGTGKTLLAGVIARESGMNFISVKGPELLSKYIGASEQAVRD 908
Query: 514 LFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
+F RA+ PCILFFDE +++ +RG + V +R++NQLL +LDG + +GV+V+ AT+
Sbjct: 909 IFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATS 968
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
RPD++D A+LRPGR K +Y P P R IL L+ P+ D VDL +A
Sbjct: 969 RPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVA 1020
Score = 243 (90.6 bits), Expect = 2.3e-26, Sum P(3) = 2.3e-26
Identities = 51/128 (39%), Positives = 78/128 (60%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVP 185
+GG+ V + L + +P +P+L L +R G+LLYGPPG GKT LA IA E+G+
Sbjct: 826 IGGLHEVRQILWDTIQLPAKYPELFANLPIRQRMGVLLYGPPGTGKTLLAGVIARESGMN 885
Query: 186 FYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIV 245
F + E++S GASE+ +RD+F +A P I+F DE ++IA +R + + R+V
Sbjct: 886 FISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRVV 945
Query: 246 TQLMTCMD 253
QL+T +D
Sbjct: 946 NQLLTQLD 953
Score = 140 (54.3 bits), Expect = 2.3e-26, Sum P(3) = 2.3e-26
Identities = 29/66 (43%), Positives = 43/66 (65%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
V V+ AT+RPD +DPAL RPGR D+ + PD+ +R++IL+VL+ +L + DL +A
Sbjct: 961 VYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVA 1020
Query: 338 RSTPGF 343
T F
Sbjct: 1021 SVTNSF 1026
Score = 87 (35.7 bits), Expect = 1.6e-55, Sum P(3) = 1.6e-55
Identities = 63/238 (26%), Positives = 98/238 (41%)
Query: 126 LGGMESV----LEELKMEVIV-PLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIAN 180
LGG+ S+ LE + ++ PL + G+R A +L G G GK+ LA AI
Sbjct: 540 LGGVNSLGVSSLEHITHSLLGRPLSRQLMSLVAGLRNGA-LLFTGGKGSGKSTLAKAICK 598
Query: 181 ETGVPFYKISATEVVS--GVSGASEENIR---DL-FSKAYRTAPSIVFIDEIDAIASKRE 234
E + EVV + G ENI+ +L FS+A PS++ +D++D I
Sbjct: 599 EASDTLD--AHVEVVGCKALRGKRLENIQKTVELAFSEATWRQPSVILLDDLDLIVGVPA 656
Query: 235 NLQREMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPAL 294
+ E V +S RL V VI + ++ P L
Sbjct: 657 APEHEHGPEAV--------QSQRLAH--ALSDMMKEFISMGSLVAVIATSQSQHSLHPWL 706
Query: 295 -RRPGRFDREIVLGV--PDENARVQIL-SVLTRNLRVE----GSFDLVKIARSTPGFV 344
G + V + P++ R +IL +V+ L + + DL +IA+ T GFV
Sbjct: 707 VSAQGIHIFQCVQHIQPPNQEQRCEILHNVIKNKLDCDINRFTNLDLKRIAKETEGFV 764
Score = 49 (22.3 bits), Expect = 1.6e-55, Sum P(3) = 1.6e-55
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 668 IKLTHFEQALSKISPSVSELQIQRYKTLSETFK 700
I +H ALS PS+SE + + L E F+
Sbjct: 1213 ISQSHLMAALSHTRPSISEDDWKNFAELYENFQ 1245
>UNIPROTKB|G4NBI6 [details] [associations]
symbol:MGG_00529 "Peroxisomal biogenesis factor 6"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CM001235 GO:GO:0017111 KO:K13339
RefSeq:XP_003718527.1 ProteinModelPortal:G4NBI6
EnsemblFungi:MGG_00529T0 GeneID:2674587 KEGG:mgr:MGG_00529
Uniprot:G4NBI6
Length = 1375
Score = 557 (201.1 bits), Expect = 2.3e-55, Sum P(3) = 2.3e-55
Identities = 136/358 (37%), Positives = 196/358 (54%)
Query: 279 LVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQIL-SVLT-RNLRVEGSFDLVKI 336
++I T PD + +R G F E+ + PDE R IL S++ R + ++ DL +
Sbjct: 847 VLIATTTEPDKIPDGVR--GLFTHELEMTAPDEGEREGILRSIVDQRGINLDPGVDLGGV 904
Query: 337 ARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMER 396
A T V R+ + +E + S R +
Sbjct: 905 ALKTAALVAGDLVDVIDRAIVAQRSRL--ESLAEKASQSRQGNQPAVTLRDVQVAGGTAV 962
Query: 397 LTITMTDFEEATKMVQPS-SRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEY 455
+T D + A + + + + G IP+V W+DVGGL ++ I ++ PE +
Sbjct: 963 RGLTKGDLDTAVEAARKNFADAIGAPKIPSVTWDDVGGLGNVKDAVMETIQLPLERPELF 1022
Query: 456 EEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLF 515
+ G+ +G L YGPPG GKTL+AKA+A E NF +KGPELLN Y+GESE VR +F
Sbjct: 1023 AK-GMKKRSGILFYGPPGTGKTLLAKAIATEYSLNFFSVKGPELLNMYIGESEANVRRVF 1081
Query: 516 SRARTCSPCILFFDEVDALTTKRGKEG--GWVVERLLNQLLIELDGA----DKRKGVFVI 569
RAR PC++FFDE+D++ KRG +G G V++R+++QLL ELDG D GVFVI
Sbjct: 1082 QRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSGDDSGGGVFVI 1141
Query: 570 GATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGL-ILEALARKKPIDDSVDLHTIAQ 626
GATNRPD++D+A+LRPGRF KLLY+ + E+ L I+EAL RK + SV L +A+
Sbjct: 1142 GATNRPDLLDQALLRPGRFDKLLYLGVSDTHEKQLTIMEALTRKFTLHPSVSLRAVAE 1199
Score = 337 (123.7 bits), Expect = 6.2e-27, P = 6.2e-27
Identities = 84/222 (37%), Positives = 123/222 (55%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+ +V + + + +PL P+L G++ +GIL YGPPG GKT LA AIA E
Sbjct: 995 WDDVGGLGNVKDAVMETIQLPLERPELFA-KGMKKRSGILFYGPPGTGKTLLAKAIATEY 1053
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQRE--M 240
+ F+ + E+++ G SE N+R +F +A P +VF DE+D++A KR N +
Sbjct: 1054 SLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGV 1113
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRF 300
RIV+QL+ +D + G G V VIGATNRPD +D AL RPGRF
Sbjct: 1114 MDRIVSQLLAELDG----MSSGDDSG---------GGVFVIGATNRPDLLDQALLRPGRF 1160
Query: 301 DREIVLGVPDENAR-VQILSVLTRNLRVEGSFDLVKIARSTP 341
D+ + LGV D + + + I+ LTR + S L +A P
Sbjct: 1161 DKLLYLGVSDTHEKQLTIMEALTRKFTLHPSVSLRAVAEKLP 1202
Score = 44 (20.5 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 157 PMAGILLYGPP-GCGKTKLAHAIANETGVPFYKISATEVVS-GVSGASE 203
P ILL GK LA + G+ + I+A ++++ G G S+
Sbjct: 749 PAVAILLVSTQRNIGKATLATDTCRDIGLHTFTINAYDILNEGGGGGSD 797
Score = 40 (19.1 bits), Expect = 2.3e-55, Sum P(3) = 2.3e-55
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 281 IGATNRPDAVDPALRRPGRFDREIVLGVPD 310
+G+ PDA +P R P R V G+P+
Sbjct: 446 LGSFGEPDAQEPVWR-PAR-----VFGLPE 469
Score = 39 (18.8 bits), Expect = 2.3e-55, Sum P(3) = 2.3e-55
Identities = 13/48 (27%), Positives = 22/48 (45%)
Query: 191 ATEVVSGVSGASEENIRDLFSKA----YRTAPSIVFIDEIDAIASKRE 234
++ ++ GV+ A E+ D F A Y+T S + AS+ E
Sbjct: 258 SSRMLDGVAEADEDTANDAFFSAAEERYKTEASETADESAATSASETE 305
Score = 37 (18.1 bits), Expect = 3.8e-55, Sum P(3) = 3.8e-55
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 166 PPGCGKTKLAHAIANETGVPFYKISATEVVSGVSGASEENIR 207
PP GK L +A P KI + S + G + R
Sbjct: 215 PPNPGKVTLCEPVAQGILSPNTKIIVSSGRSPLKGNRDRGSR 256
>UNIPROTKB|E2RCK9 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0006625
"protein targeting to peroxisome" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001125 InterPro:IPR002048
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR011992 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 Pfam:PF13499 PRINTS:PR00450
PROSITE:PS00674 PROSITE:PS50222 SMART:SM00054 SMART:SM00382
Prosite:PS00018 GO:GO:0005524 GO:GO:0005509 Gene3D:1.10.238.10
InterPro:IPR018247 GO:GO:0005778 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0006625
PANTHER:PTHR23077:SF12 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AAEX03009307
Ensembl:ENSCAFT00000038397 Uniprot:E2RCK9
Length = 1416
Score = 501 (181.4 bits), Expect = 3.0e-55, Sum P(3) = 3.0e-55
Identities = 103/232 (44%), Positives = 145/232 (62%)
Query: 395 ERLTITMTDFEEATKMVQPSSRREGFSAIP-NVKWEDVGGLDYLRHEFDRYIVRRIKFPE 453
E L +T DF++A + P+S R P ++ W+ +GGL +R I K+PE
Sbjct: 938 EELVLTTLDFQKALQGFIPASLRNVNLHKPRDLGWDKIGGLHEVRQILWDTIQLPAKYPE 997
Query: 454 EYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRT 513
+ + G LLYGPPG GKTL+A +A E+G NFI +KGPELL+KY+G SE AVR
Sbjct: 998 LFANLPIRQRMGVLLYGPPGTGKTLLAGVIARESGMNFISVKGPELLSKYIGASEQAVRD 1057
Query: 514 LFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
+F RA+ PCILFFDE +++ +RG + V +R++NQLL +LDG + +GV+V+ AT+
Sbjct: 1058 IFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATS 1117
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
RPD++D A+LRPGR K +Y P P R IL L+ P+ D VDL +A
Sbjct: 1118 RPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVA 1169
Score = 243 (90.6 bits), Expect = 3.5e-26, Sum P(3) = 3.5e-26
Identities = 51/128 (39%), Positives = 78/128 (60%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVP 185
+GG+ V + L + +P +P+L L +R G+LLYGPPG GKT LA IA E+G+
Sbjct: 975 IGGLHEVRQILWDTIQLPAKYPELFANLPIRQRMGVLLYGPPGTGKTLLAGVIARESGMN 1034
Query: 186 FYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIV 245
F + E++S GASE+ +RD+F +A P I+F DE ++IA +R + + R+V
Sbjct: 1035 FISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRVV 1094
Query: 246 TQLMTCMD 253
QL+T +D
Sbjct: 1095 NQLLTQLD 1102
Score = 140 (54.3 bits), Expect = 3.5e-26, Sum P(3) = 3.5e-26
Identities = 29/66 (43%), Positives = 43/66 (65%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
V V+ AT+RPD +DPAL RPGR D+ + PD+ +R++IL+VL+ +L + DL +A
Sbjct: 1110 VYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVA 1169
Query: 338 RSTPGF 343
T F
Sbjct: 1170 SVTNSF 1175
Score = 87 (35.7 bits), Expect = 3.0e-55, Sum P(3) = 3.0e-55
Identities = 63/238 (26%), Positives = 98/238 (41%)
Query: 126 LGGMESV----LEELKMEVIV-PLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIAN 180
LGG+ S+ LE + ++ PL + G+R A +L G G GK+ LA AI
Sbjct: 689 LGGVNSLGVSSLEHITHSLLGRPLSRQLMSLVAGLRNGA-LLFTGGKGSGKSTLAKAICK 747
Query: 181 ETGVPFYKISATEVVS--GVSGASEENIR---DL-FSKAYRTAPSIVFIDEIDAIASKRE 234
E + EVV + G ENI+ +L FS+A PS++ +D++D I
Sbjct: 748 EASDTLD--AHVEVVGCKALRGKRLENIQKTVELAFSEATWRQPSVILLDDLDLIVGVPA 805
Query: 235 NLQREMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPAL 294
+ E V +S RL V VI + ++ P L
Sbjct: 806 APEHEHGPEAV--------QSQRLAH--ALSDMMKEFISMGSLVAVIATSQSQHSLHPWL 855
Query: 295 -RRPGRFDREIVLGV--PDENARVQIL-SVLTRNLRVE----GSFDLVKIARSTPGFV 344
G + V + P++ R +IL +V+ L + + DL +IA+ T GFV
Sbjct: 856 VSAQGIHIFQCVQHIQPPNQEQRCEILHNVIKNKLDCDINRFTNLDLKRIAKETEGFV 913
Score = 49 (22.3 bits), Expect = 3.0e-55, Sum P(3) = 3.0e-55
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 668 IKLTHFEQALSKISPSVSELQIQRYKTLSETFK 700
I +H ALS PS+SE + + L E F+
Sbjct: 1362 ISQSHLMAALSHTRPSISEDDWKNFAELYENFQ 1394
>ASPGD|ASPL0000034610 [details] [associations]
symbol:pexF species:162425 "Emericella nidulans"
[GO:0006631 "fatty acid metabolic process" evidence=IMP]
[GO:0006625 "protein targeting to peroxisome" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0001302 "replicative cell
aging" evidence=IEA] [GO:0016562 "protein import into peroxisome
matrix, receptor recycling" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:BN001306 GO:GO:0017111
EnsemblFungi:CADANIAT00010163 OMA:CFSGDWV Uniprot:C8VJ57
Length = 1476
Score = 539 (194.8 bits), Expect = 4.0e-55, Sum P(3) = 4.0e-55
Identities = 133/358 (37%), Positives = 193/358 (53%)
Query: 279 LVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQIL--SVLTRNLRVEGSFDLVKI 336
++I T + + A+R F E L P+E R IL +V R++++ DL +
Sbjct: 878 VIIATTTDVEQIPEAIR--SMFTHEFELTAPEEKEREGILRNAVSERSIKLAPDVDLGTV 935
Query: 337 ARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMER 396
A T V R+ ++ +E + S R L
Sbjct: 936 ALKTAALVAGDLVDVVERASVARSTRL--EKLAESASKQ--SPTSKITVRDVLLAGGEAV 991
Query: 397 LTITMTDFEEATKMVQPSSRRE-GFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEY 455
+T DF+ A + + G IPNV WEDVGGL ++ I ++ PE +
Sbjct: 992 RGVTKADFDAAVDAARKNFADSIGAPKIPNVSWEDVGGLTNVKDALVETIQLPLERPELF 1051
Query: 456 EEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLF 515
+ G+ +G L YGPPG GKTL+AKA+A E NF +KGPELLN Y+GESE VR +F
Sbjct: 1052 AK-GMKKRSGILFYGPPGTGKTLLAKAIATEFSLNFFSVKGPELLNMYIGESEANVRRVF 1110
Query: 516 SRARTCSPCILFFDEVDALTTKRGKEG--GWVVERLLNQLLIELDGA----DKRKGVFVI 569
RAR PC++FFDE+D++ KRG +G G V++R+++QLL ELDG + GVFVI
Sbjct: 1111 QRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMNGGEENSGGVFVI 1170
Query: 570 GATNRPDVMDRAVLRPGRFGKLLYVPLP-TPDERGLILEALARKKPIDDSVDLHTIAQ 626
GATNRPD++D A+LRPGRF K+LY+ + T +++ ILEAL RK + + L +++
Sbjct: 1171 GATNRPDLLDTALLRPGRFDKMLYLGVSDTHEKQATILEALTRKFALAPDLSLARVSE 1228
Score = 347 (127.2 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 98/304 (32%), Positives = 153/304 (50%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++D+GG+ +V + L + +PL P+L G++ +GIL YGPPG GKT LA AIA E
Sbjct: 1024 WEDVGGLTNVKDALVETIQLPLERPELFA-KGMKKRSGILFYGPPGTGKTLLAKAIATEF 1082
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQRE--M 240
+ F+ + E+++ G SE N+R +F +A P +VF DE+D++A KR N +
Sbjct: 1083 SLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGV 1142
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRF 300
RIV+QL+ +D + G G V VIGATNRPD +D AL RPGRF
Sbjct: 1143 MDRIVSQLLAELDGMN-----GGEENS--------GGVFVIGATNRPDLLDTALLRPGRF 1189
Query: 301 DREIVLGVPDENAR-VQILSVLTRNLRVEGSFDLVKIARSTP-GFVXXXXXXXXXXXXXX 358
D+ + LGV D + + IL LTR + L +++ P +
Sbjct: 1190 DKMLYLGVSDTHEKQATILEALTRKFALAPDLSLARVSERLPLTYTGADLYALCSDAMLK 1249
Query: 359 XMKR---IIDQRKSELSGNSIAEQHSDDWWRQPWLPEEMERLTITMTDFEEATKMVQPS- 414
+ R +D++ +L G ++ + D P +++ + +T DF A + PS
Sbjct: 1250 AITRKATAVDEKIKQLPGGPVSTAYFFDHLSTP---DDVA-VMVTEEDFVAAQSELVPSV 1305
Query: 415 SRRE 418
S +E
Sbjct: 1306 SAKE 1309
Score = 51 (23.0 bits), Expect = 4.0e-55, Sum P(3) = 4.0e-55
Identities = 17/65 (26%), Positives = 31/65 (47%)
Query: 153 LGVRPMAGILLYGPPGCGKTKLAHAIANETGVPFYKISATEVVS--GVSGASEENIRDLF 210
LG++P+ +L GK LA E G+ + I A ++++ G +G + L
Sbjct: 777 LGMKPVVILLRSQQRHIGKASLATRACAEIGLHTFPIDAYDILTEGGANGGDVKTEAYLK 836
Query: 211 SKAYR 215
++A R
Sbjct: 837 ARAER 841
Score = 46 (21.3 bits), Expect = 4.0e-55, Sum P(3) = 4.0e-55
Identities = 10/43 (23%), Positives = 23/43 (53%)
Query: 659 SSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETFKA 701
S+ D + F A S++ PSVS +++ ++ + + F++
Sbjct: 1280 STPDDVAVMVTEEDFVAAQSELVPSVSAKELEHFERIRQMFES 1322
Score = 38 (18.4 bits), Expect = 2.8e-54, Sum P(3) = 2.8e-54
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 595 PLPTPDERGLILEAL 609
P PTP+ G +EAL
Sbjct: 1334 PAPTPNTIGDAIEAL 1348
>DICTYBASE|DDB_G0289867 [details] [associations]
symbol:pex1 "peroxisomal biogenesis factor 1"
species:44689 "Dictyostelium discoideum" [GO:0042623 "ATPase
activity, coupled" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0007031
"peroxisome organization" evidence=IEA;ISS] [GO:0006625 "protein
targeting to peroxisome" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0289867 GO:GO:0005524
GO:GO:0005777 GO:GO:0007031 GenomeReviews:CM000154_GR GO:GO:0005778
EMBL:AAFI02000149 HSSP:Q01853 eggNOG:COG0464 GO:GO:0042623
GO:GO:0006625 KO:K13338 PANTHER:PTHR23077:SF12 RefSeq:XP_636032.1
ProteinModelPortal:Q54GX5 EnsemblProtists:DDB0238022 GeneID:8627359
KEGG:ddi:DDB_G0289867 Uniprot:Q54GX5
Length = 1227
Score = 504 (182.5 bits), Expect = 6.7e-55, Sum P(3) = 6.7e-55
Identities = 121/352 (34%), Positives = 191/352 (54%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTR----NLRVEGSFDL 333
+++I ++ +++ P F I L P RV+IL + L+ + S +L
Sbjct: 730 IVMIATVISSQSLCQSIQIPELFGLTIELQAPTREERVEILERYLKYQGKQLKDQQSLNL 789
Query: 334 VKIARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLPEE 393
+K + S G++ +++I+D R LS E ++++ +
Sbjct: 790 MKFSASMEGYLGCD------------VEQIVD-RSIHLSSIKEIENNNNN------NDDN 830
Query: 394 MERLTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPE 453
+ I + E+A + P + + +KW+D+GGLD +R I K+P+
Sbjct: 831 DDDNIIEFSIIEKAKEGYTPITLKGIKLHSSEIKWQDIGGLDSVRAMLKETIEWPTKYPK 890
Query: 454 EYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRT 513
++ + L +G LLYGP GCGKTL+A A+A E G NFI +KGPELLNKY+G SE VR
Sbjct: 891 LFQSSPLRLRSGILLYGPTGCGKTLLASAIAGECGLNFISVKGPELLNKYIGSSEQGVRD 950
Query: 514 LFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
+FSRA + PC+LFFDE D++ +RG + V +R++NQ L +LDG + GV+V+ AT+
Sbjct: 951 VFSRASSAKPCVLFFDEFDSIAPRRGHDNSGVTDRVVNQFLTQLDGVEGLTGVYVLAATS 1010
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
RPD++D A+LRPGR K LY +P +ER IL L K + S+ L ++
Sbjct: 1011 RPDLIDPALLRPGRLDKSLYCNIPEFNERLDILTCLKSKMNLSPSISLEQLS 1062
Score = 269 (99.8 bits), Expect = 2.9e-30, Sum P(3) = 2.9e-30
Identities = 55/132 (41%), Positives = 84/132 (63%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
++QD+GG++SV LK + P +P+L Q +R +GILLYGP GCGKT LA AIA E
Sbjct: 864 KWQDIGGLDSVRAMLKETIEWPTKYPKLFQSSPLRLRSGILLYGPTGCGKTLLASAIAGE 923
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREME 241
G+ F + E+++ G+SE+ +RD+FS+A P ++F DE D+IA +R + +
Sbjct: 924 CGLNFISVKGPELLNKYIGSSEQGVRDVFSRASSAKPCVLFFDEFDSIAPRRGHDNSGVT 983
Query: 242 RRIVTQLMTCMD 253
R+V Q +T +D
Sbjct: 984 DRVVNQFLTQLD 995
Score = 135 (52.6 bits), Expect = 2.9e-30, Sum P(3) = 2.9e-30
Identities = 25/63 (39%), Positives = 40/63 (63%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
V V+ AT+RPD +DPAL RPGR D+ + +P+ N R+ IL+ L + + S L +++
Sbjct: 1003 VYVLAATSRPDLIDPALLRPGRLDKSLYCNIPEFNERLDILTCLKSKMNLSPSISLEQLS 1062
Query: 338 RST 340
+T
Sbjct: 1063 TNT 1065
Score = 63 (27.2 bits), Expect = 6.7e-55, Sum P(3) = 6.7e-55
Identities = 15/44 (34%), Positives = 27/44 (61%)
Query: 657 SKSS-SDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETF 699
+KS+ S+ P I +H + AL + SPS+SE + ++Y+ + F
Sbjct: 1163 NKSNLSNEQPPLITQSHIDLALKESSPSISESERKKYERIYNNF 1206
Score = 63 (27.2 bits), Expect = 6.7e-55, Sum P(3) = 6.7e-55
Identities = 24/97 (24%), Positives = 46/97 (47%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQ--LPQWLGVRPMAGILLYGPPGCGKTKLAHAIAN 180
FQ +GGME +++ K + + +Y + + L + G+++ G G GK+ LA ++
Sbjct: 565 FQRIGGMEKQIKQAKEFLSLYMYKDLSVIREQLNTPGVNGMIIAGSHGSGKSLLATSLGG 624
Query: 181 ETGVPFYKISATEVVSGVSGASE---ENIRDLFSKAY 214
+ +A + + E ENIR F+K +
Sbjct: 625 YYSTDS-RSNAFIIKLDCNQLKELKVENIRKQFNKLF 660
>UNIPROTKB|I3LPI5 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060152 "microtubule-based peroxisome localization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 PANTHER:PTHR23077:SF12 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 GeneTree:ENSGT00550000075032
EMBL:FP565472 Ensembl:ENSSSCT00000022601 Uniprot:I3LPI5
Length = 1286
Score = 474 (171.9 bits), Expect = 1.8e-54, Sum P(3) = 1.8e-54
Identities = 100/233 (42%), Positives = 144/233 (61%)
Query: 395 ERLTITMTDFEEATKMVQPSSRREGFSAIP-NVKWEDVGGLDYLRHEFDRYIVRRIKFPE 453
E L +T DF++A + P+S R P ++ W+ +GGL +R I K+PE
Sbjct: 808 EELVLTTLDFQKALQGFVPASLRNVNLHKPRDLGWDHIGGLREVRQILMDTIQLPAKYPE 867
Query: 454 EYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIK-GPELLNKYVGESELAVR 512
+ + TG LLYGPPG GKTL+A VA E+G + ++ GPELL+KY+G SE AVR
Sbjct: 868 LFANLPIRQRTGVLLYGPPGTGKTLLAGVVARESGMILLVLRYGPELLSKYIGASEQAVR 927
Query: 513 TLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGAT 572
+F RA+ PCILFFDE +++ +RG + V +R++NQLL +LDG + +GV+V+ AT
Sbjct: 928 DIFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAAT 987
Query: 573 NRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
+RPD++D A+LRPGR K +Y P P R IL L+ P+ + VDL +A
Sbjct: 988 SRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSASLPLAEDVDLQHVA 1040
Score = 321 (118.1 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 80/219 (36%), Positives = 122/219 (55%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVP 185
+GG+ V + L + +P +P+L L +R G+LLYGPPG GKT LA +A E+G+
Sbjct: 845 IGGLREVRQILMDTIQLPAKYPELFANLPIRQRTGVLLYGPPGTGKTLLAGVVARESGMI 904
Query: 186 FYKIS-ATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRI 244
+ E++S GASE+ +RD+F +A P I+F DE ++IA +R + + R+
Sbjct: 905 LLVLRYGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRV 964
Query: 245 VTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDREI 304
V QL+T +D L G V V+ AT+RPD +DPAL RPGR D+ +
Sbjct: 965 VNQLLTQLDGVEGL--QG---------------VYVLAATSRPDLIDPALLRPGRLDKCV 1007
Query: 305 VLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
PD+ +R++IL+VL+ +L + DL +A T F
Sbjct: 1008 YCPPPDQVSRLEILNVLSASLPLAEDVDLQHVASLTDSF 1046
Score = 101 (40.6 bits), Expect = 1.8e-54, Sum P(3) = 1.8e-54
Identities = 65/239 (27%), Positives = 100/239 (41%)
Query: 126 LGGMESV----LEELKMEVIV-PLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIAN 180
LGG+ S+ +E + ++ PL + G+R A +LL G G GK+ LA AI
Sbjct: 559 LGGVNSIGVSSMEHITHSLLGRPLSRQLMSLMAGLRNGA-LLLTGGKGSGKSTLAKAICK 617
Query: 181 ETGVPFYKISA-TEVVS--GVSGASEENIRDL----FSKAYRTAPSIVFIDEIDAIASKR 233
E F + A E+V + G EN++ FS+A PS+V +D++D +A
Sbjct: 618 EA---FDVLDAHVEIVDCKALRGKRLENLQKTIVAAFSEASWRQPSVVLLDDLDLVAGLP 674
Query: 234 ENLQREMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPA 293
+ E V +S RL V +I + ++ P
Sbjct: 675 ALPEHEHSPEAV--------QSQRLAH--ALNDMTKELISMGSLVALIATSQSQHSLHPL 724
Query: 294 L-RRPGRFDREIVLGV--PDENARVQILSVLTRN-LRVE-GSF---DLVKIARSTPGFV 344
L G + V + PD+ R +IL +N L + SF DL +IA+ T GFV
Sbjct: 725 LVSAQGIHLFQCVQHIQPPDQEQRCEILHNAIKNKLDCDMNSFTDLDLKRIAKETEGFV 783
Score = 53 (23.7 bits), Expect = 1.8e-54, Sum P(3) = 1.8e-54
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 664 TPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETFK 700
T I +H ALS PS+SE + + L E F+
Sbjct: 1228 TSLAISQSHLMTALSHTRPSISEDDWKNFAELYENFQ 1264
>DICTYBASE|DDB_G0272777 [details] [associations]
symbol:DDB_G0272777 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0272777 GO:GO:0005524 EMBL:AAFI02000008
eggNOG:COG0464 GO:GO:0017111 RefSeq:XP_644963.1
ProteinModelPortal:Q86B10 EnsemblProtists:DDB0305119 GeneID:8618641
KEGG:ddi:DDB_G0272777 OMA:ITRAGRI Uniprot:Q86B10
Length = 738
Score = 489 (177.2 bits), Expect = 3.9e-53, Sum P(2) = 3.9e-53
Identities = 114/343 (33%), Positives = 187/343 (54%)
Query: 279 LVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVE-------GSF 331
+++ + +D ++ R GR D+ I L +P ++ R+ ILS L +N ++
Sbjct: 339 IILSTCTSVENIDQSITRAGRIDKFIHLTIPTQSKRMLILSNLLKNTPLQYDTNNNNDDI 398
Query: 332 DLVKIARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPWLP 391
D KI + F+ K + + S L+ +S E+ ++
Sbjct: 399 DQCKI-KDKEQFIVELSKITPGFLFKDLTK--LCRTVSLLTVSSFEEEEEEE-------N 448
Query: 392 EEMERLTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKF 451
E + + I+ F+EA K ++PS+ + NVKW+ +GG ++ F + I +K+
Sbjct: 449 ENEKEIKISFKIFKEALKFIKPSTLINFDVTVQNVKWDRIGGYKQVKERFRQLIEWPLKY 508
Query: 452 PEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAV 511
+ ++ ++ +G LL+GP GCGK+L+ KA+A E NFI IKG ++ +K++GESE +
Sbjct: 509 QDTFKRLSLNNSSGLLLHGPSGCGKSLMVKAIATEMSINFISIKGSDIYSKWLGESERII 568
Query: 512 RTLFSRARTCSPCILFFDEVDALTTKRGK----EGGWVVERLLNQLLIELDGADKRKGVF 567
R LF AR SPCI+FFDE+D+LT RG E G +R+L+QLL E+DG + +F
Sbjct: 569 RDLFKSARLSSPCIMFFDEIDSLTLSRGSGDDNEDGGTSKRILSQLLNEMDGIQVKSQIF 628
Query: 568 VIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALA 610
+IG TN +D A+LRPGRF L+++ LP+ D+R IL L+
Sbjct: 629 LIGCTNSIQSIDSALLRPGRFESLIHIDLPSLDDRLDILNVLS 671
Score = 259 (96.2 bits), Expect = 8.0e-19, P = 8.0e-19
Identities = 68/207 (32%), Positives = 108/207 (52%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
++ +GG + V E + + PL + + L + +G+LL+GP GCGK+ + AIA E
Sbjct: 484 KWDRIGGYKQVKERFRQLIEWPLKYQDTFKRLSLNNSSGLLLHGPSGCGKSLMVKAIATE 543
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR----ENLQ 237
+ F I +++ S G SE IRDLF A ++P I+F DEID++ R +N
Sbjct: 544 MSINFISIKGSDIYSKWLGESERIIRDLFKSARLSSPCIMFFDEIDSLTLSRGSGDDNED 603
Query: 238 REMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRP 297
+RI++QL+ MD +Q + +IG TN ++D AL RP
Sbjct: 604 GGTSKRILSQLLNEMDG----IQ-------------VKSQIFLIGCTNSIQSIDSALLRP 646
Query: 298 GRFDREIVLGVPDENARVQILSVLTRN 324
GRF+ I + +P + R+ IL+VL+ N
Sbjct: 647 GRFESLIHIDLPSLDDRLDILNVLSTN 673
Score = 85 (35.0 bits), Expect = 3.9e-53, Sum P(2) = 3.9e-53
Identities = 25/94 (26%), Positives = 46/94 (48%)
Query: 160 GILLYGPPGCGKTKLAHAIANETGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPS 219
GIL+ GP G K +L IA + + ++ E+V+G SG L SK P
Sbjct: 247 GILIDGPEGTSKLQLIEYIAQQYNYKYLNLN--ELVNGGSGGGGGE--QLNSKE----PM 298
Query: 220 IVFIDEIDAIASKRENLQREMERRIVTQLMTCMD 253
I ++ +D+I K + + +++++ +L +D
Sbjct: 299 IYILNNLDSIVGKISDNENSYQKKVIQRLTNFID 332
>ZFIN|ZDB-GENE-070530-1 [details] [associations]
symbol:pex1 "peroxisome biogenesis factor 1"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0005778 "peroxisomal membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006625
"protein targeting to peroxisome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070530-1 GO:GO:0005524 GO:GO:0005778
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623
GO:GO:0006625 KO:K13338 PANTHER:PTHR23077:SF12 InterPro:IPR015343
Pfam:PF09263 GeneTree:ENSGT00550000075032 EMBL:CU634017
EMBL:CU928445 IPI:IPI01006424 RefSeq:XP_003200668.1
Ensembl:ENSDART00000114077 Ensembl:ENSDART00000123385
GeneID:100534854 KEGG:dre:100534854 Uniprot:F1Q805
Length = 1237
Score = 465 (168.7 bits), Expect = 5.5e-53, Sum P(3) = 5.5e-53
Identities = 103/228 (45%), Positives = 137/228 (60%)
Query: 399 ITMTDFEEATKMVQPSSRREGFSAIPN-VKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEE 457
++ DF +A + P S + P+ E +GGL R I+ K+P +
Sbjct: 765 LSCKDFRQALQGFTPPSLWDAQLQAPSGAGMERIGGLHEARQLLMDIILLPAKYPLLFSS 824
Query: 458 FGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSR 517
+ +G LLYG PG GKTL+A AVA E+G NFI IKGPELL+KY+G SE AVR +F R
Sbjct: 825 LPLRQCSGVLLYGAPGTGKTLLAGAVAKESGMNFISIKGPELLSKYIGASEQAVRDVFQR 884
Query: 518 ARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDV 577
A+ PCILFFDE D+L +RG + V +R++NQLL +LDG + GV+V+ A++RPD+
Sbjct: 885 AQQAKPCILFFDEFDSLAPRRGHDNTGVTDRVVNQLLTQLDGVEGLTGVYVLAASSRPDL 944
Query: 578 MDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
+D A+LRPGR K LY P P R IL AL P+ VDL IA
Sbjct: 945 IDPALLRPGRLDKSLYCPPPDRAARLEILRALTHSVPLAADVDLDQIA 992
Score = 244 (91.0 bits), Expect = 1.3e-26, Sum P(3) = 1.3e-26
Identities = 52/129 (40%), Positives = 81/129 (62%)
Query: 126 LGGMESVLEELKMEVIV-PLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGV 184
+GG+ +L M++I+ P +P L L +R +G+LLYG PG GKT LA A+A E+G+
Sbjct: 798 IGGLHEA-RQLLMDIILLPAKYPLLFSSLPLRQCSGVLLYGAPGTGKTLLAGAVAKESGM 856
Query: 185 PFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRI 244
F I E++S GASE+ +RD+F +A + P I+F DE D++A +R + + R+
Sbjct: 857 NFISIKGPELLSKYIGASEQAVRDVFQRAQQAKPCILFFDEFDSLAPRRGHDNTGVTDRV 916
Query: 245 VTQLMTCMD 253
V QL+T +D
Sbjct: 917 VNQLLTQLD 925
Score = 140 (54.3 bits), Expect = 1.3e-26, Sum P(3) = 1.3e-26
Identities = 29/66 (43%), Positives = 42/66 (63%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
V V+ A++RPD +DPAL RPGR D+ + PD AR++IL LT ++ + DL +IA
Sbjct: 933 VYVLAASSRPDLIDPALLRPGRLDKSLYCPPPDRAARLEILRALTHSVPLAADVDLDQIA 992
Query: 338 RSTPGF 343
+T F
Sbjct: 993 GATELF 998
Score = 98 (39.6 bits), Expect = 5.5e-53, Sum P(3) = 5.5e-53
Identities = 52/239 (21%), Positives = 99/239 (41%)
Query: 121 PRFQDLGGMESVLEELKMEVIVPLYHPQLPQWL-----GVRPMAGILLYGPPGCGKTKLA 175
P LGG+E + + L L + L G+R A +L+ G G GK+ L+
Sbjct: 515 PSLSSLGGVEDISRSAFQHISHALLGGSLSRELISTGRGLRGGA-LLITGAKGSGKSSLS 573
Query: 176 HAI---ANETGVPFYKISATEVVSGV-SGASEENIRDLFSKAYRTAPSIVFIDEIDAIAS 231
A+ A+E ++ + + G + + + D+F +A PS+V +D++D +A
Sbjct: 574 RALCRKASEDLDAHIQLLDCKTLKGKRTDTIRQRLEDVFEQAVWRQPSVVLLDDLDHVAG 633
Query: 232 KRENLQREMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVD 291
+ + E V + H + L++ A A+
Sbjct: 634 AATSPEHEHGPEAVLR-------QH--ISQSLKDLVDEIVLRSSLIALIVTAQTE-HALH 683
Query: 292 PALR--RPGRFDREIV-LGVPDENARVQILS--VLTRNLRV-EGSFDLVKIARSTPGFV 344
P L + F + + PD+ RV+IL ++ ++ +V + + DL +A+ T GF+
Sbjct: 684 PTLTVVQGSHFFQSFCKIPTPDQAQRVEILKSLIVKKSFQVCQTTLDLDSVAKETEGFM 742
Score = 50 (22.7 bits), Expect = 5.5e-53, Sum P(3) = 5.5e-53
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 671 THFEQALSKISPSVSELQIQRYKTLSETFKA 701
TH AL+ SVS +RY L E+F A
Sbjct: 1186 THLTTALANTRASVSREDWKRYTELYESFGA 1216
>UNIPROTKB|G4MQP9 [details] [associations]
symbol:MGG_09299 "Peroxisome biosynthesis protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005778 InterPro:IPR009010 SUPFAM:SSF50692
EMBL:CM001231 GO:GO:0043581 GO:GO:0042623 GO:GO:0006625 KO:K13338
PANTHER:PTHR23077:SF12 RefSeq:XP_003709948.1
ProteinModelPortal:G4MQP9 EnsemblFungi:MGG_09299T0 GeneID:2680162
KEGG:mgr:MGG_09299 Uniprot:G4MQP9
Length = 1250
Score = 492 (178.3 bits), Expect = 2.2e-52, Sum P(4) = 2.2e-52
Identities = 101/223 (45%), Positives = 141/223 (63%)
Query: 401 MTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEE-FG 459
M DF+EA K P+S +K++ +GGL R R ++ +++P +Y F
Sbjct: 826 MQDFDEALKGFTPASLHNVSLQSSTIKFDSIGGLSETR----RVLLETLQYPTKYAPIFA 881
Query: 460 ---VDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
+ L +G LLYG PGCGKTL+A AVA E G NFI +KGPE+LNKY+G SE +VR LF
Sbjct: 882 QCPLRLRSGLLLYGYPGCGKTLLASAVAGECGLNFISVKGPEILNKYIGASEKSVRDLFE 941
Query: 517 RARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPD 576
RA PC+LFFDE D++ KRG + V +R++NQLL ++DGA+ GV+V+ AT+RPD
Sbjct: 942 RASAAKPCVLFFDEFDSIAPKRGHDSTGVTDRVVNQLLTQMDGAEGLSGVYVLAATSRPD 1001
Query: 577 VMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSV 619
++D A+LRPGR K L P ++R I+ ALA K + + V
Sbjct: 1002 LIDPALLRPGRLDKSLICDFPNAEDRLDIIRALASKVKVGEEV 1044
Score = 249 (92.7 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 74/226 (32%), Positives = 114/226 (50%)
Query: 122 RFQDLGGMESVLEELKMEVIVPL-YHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIAN 180
+F +GG+ L + P Y P Q +R +G+LLYG PGCGKT LA A+A
Sbjct: 852 KFDSIGGLSETRRVLLETLQYPTKYAPIFAQ-CPLRLRSGLLLYGYPGCGKTLLASAVAG 910
Query: 181 ETGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREM 240
E G+ F + E+++ GASE+++RDLF +A P ++F DE D+IA KR + +
Sbjct: 911 ECGLNFISVKGPEILNKYIGASEKSVRDLFERASAAKPCVLFFDEFDSIAPKRGHDSTGV 970
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPAL--RRPG 298
R+V QL+T MD + G P L+ A RP +D +L P
Sbjct: 971 TDRVVNQLLTQMDGAE-----GLSGVYVLAATSRPD--LIDPALLRPGRLDKSLICDFPN 1023
Query: 299 RFDR-EIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
DR +I+ + ++V++ + N E +L+++AR T GF
Sbjct: 1024 AEDRLDIIRALA---SKVKVGEEVLAN---EA--ELLELARRTEGF 1061
Score = 57 (25.1 bits), Expect = 2.2e-52, Sum P(4) = 2.2e-52
Identities = 27/91 (29%), Positives = 39/91 (42%)
Query: 158 MAGILLYGPPGCGKTKLAHAIANETGVP-FYKI------SATEVVSGVSGASEENIRDLF 210
++ +LL G G GKT + +IAN FY S T S V+ E + LF
Sbjct: 553 LSSVLLTGALGSGKTSVGKSIANALKRDSFYHTTYFTCRSLTNDESRVATV-RETLNRLF 611
Query: 211 SKAYRTA----PSIVFIDEIDAIASKRENLQ 237
A A +IV +D++D + LQ
Sbjct: 612 MNASWGARLGGKAIVILDDLDKLCPAETELQ 642
Score = 39 (18.8 bits), Expect = 2.2e-52, Sum P(4) = 2.2e-52
Identities = 10/44 (22%), Positives = 19/44 (43%)
Query: 656 SSKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETF 699
+ + S I +H +AL + PS+S + R + + F
Sbjct: 1183 AKQDSGGAGEVVIGWSHITKALDETRPSISSEERARLERIYREF 1226
Score = 38 (18.4 bits), Expect = 2.2e-52, Sum P(4) = 2.2e-52
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 275 PGYVLVIGATNRPDAVDPALRRPGRFDREIVLGVP 309
PG +L++ R A+ +L D LGVP
Sbjct: 789 PGDLLLLVTRARNAALSRSLEETAEDDHLNALGVP 823
>POMBASE|SPCC553.03 [details] [associations]
symbol:pex1 "AAA family ATPase Pex1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005777
"peroxisome" evidence=ISO] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006625
"protein targeting to peroxisome" evidence=IEA] [GO:0007031
"peroxisome organization" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
SMART:SM00382 PomBase:SPCC553.03 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0007031
GO:GO:0016887 GO:GO:0005778 HSSP:Q01853 eggNOG:COG0464
GO:GO:0042623 GO:GO:0006625 PANTHER:PTHR23077:SF12 PIR:T41400
RefSeq:NP_587770.1 ProteinModelPortal:O74941
EnsemblFungi:SPCC553.03.1 GeneID:2539405 KEGG:spo:SPCC553.03
OrthoDB:EOG4TQQJ3 NextBio:20800569 Uniprot:O74941
Length = 937
Score = 460 (167.0 bits), Expect = 2.9e-52, Sum P(3) = 2.9e-52
Identities = 88/221 (39%), Positives = 140/221 (63%)
Query: 405 EEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLET 464
E+ K P R+ +++W D+ G+ + I +K+ Y++ + L T
Sbjct: 582 EKTLKDFVPLQLRKAKFVKSSIRWIDIAGMQEAKEAVRDIIESPVKYSLIYKQCRLRLPT 641
Query: 465 GFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPC 524
G LL+G PGCGKT +A A+++ FI IKGPELL+KY+G+SE VR LFSRA+ PC
Sbjct: 642 GILLFGYPGCGKTYLASAISSTFPVQFISIKGPELLDKYIGKSEQGVRDLFSRAQMAKPC 701
Query: 525 ILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLR 584
+LFFDE D++ +RG++ V +R++NQ+L ++DGA+ GV+++ AT RPD++D A+LR
Sbjct: 702 VLFFDEFDSVAPRRGQDSTGVTDRVVNQILTQMDGAESLDGVYIVAATTRPDMIDPALLR 761
Query: 585 PGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
PGR KL++ LP +ER +L+ LA + I+++ L ++
Sbjct: 762 PGRLDKLIFCDLPNEEERLEVLQKLANRFHIENAAMLKKLS 802
Score = 226 (84.6 bits), Expect = 2.1e-24, Sum P(3) = 2.1e-24
Identities = 49/137 (35%), Positives = 78/137 (56%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
R+ D+ GM+ E ++ + P+ + + + +R GILL+G PGCGKT LA AI++
Sbjct: 604 RWIDIAGMQEAKEAVRDIIESPVKYSLIYKQCRLRLPTGILLFGYPGCGKTYLASAISST 663
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREME 241
V F I E++ G SE+ +RDLFS+A P ++F DE D++A +R +
Sbjct: 664 FPVQFISIKGPELLDKYIGKSEQGVRDLFSRAQMAKPCVLFFDEFDSVAPRRGQDSTGVT 723
Query: 242 RRIVTQLMTCMDESHRL 258
R+V Q++T MD + L
Sbjct: 724 DRVVNQILTQMDGAESL 740
Score = 140 (54.3 bits), Expect = 2.1e-24, Sum P(3) = 2.1e-24
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
V ++ AT RPD +DPAL RPGR D+ I +P+E R+++L L +E + L K++
Sbjct: 743 VYIVAATTRPDMIDPALLRPGRLDKLIFCDLPNEEERLEVLQKLANRFHIENAAMLKKLS 802
Query: 338 RSTPGF 343
T G+
Sbjct: 803 TLTDGY 808
Score = 95 (38.5 bits), Expect = 2.9e-52, Sum P(3) = 2.9e-52
Identities = 24/80 (30%), Positives = 43/80 (53%)
Query: 161 ILLYGPPGCGKTKLAHAIANE---TGVPFYKISATEVVSGVSGASEENI-RDLFSKAYRT 216
I + GP GCGK+ L H++ + + F I + + S A ++ ++F +A R
Sbjct: 375 IYINGPKGCGKSNLVHSLFDYYSLNSIYFQMIVSCSEIDRSSFAKFQSFWNNVFIQAERY 434
Query: 217 APSIVFIDEIDA-IASKREN 235
PSI+++D++ I+S EN
Sbjct: 435 EPSIIYLDDVHCLISSSNEN 454
Score = 43 (20.2 bits), Expect = 2.9e-52, Sum P(3) = 2.9e-52
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 658 KSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETFKA 701
+S SD I+ +AL K SPS++ + + L F++
Sbjct: 873 QSMSDSKSVVIEDYMLMEALKKNSPSLNSEEFEHLSNLYRDFRS 916
Score = 37 (18.1 bits), Expect = 3.3e-46, Sum P(3) = 3.3e-46
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 189 ISATEVVSGVSGASEENIRDL 209
I+ + VSG+SG + I+D+
Sbjct: 312 IAVSYSVSGLSGVVKNPIQDI 332
>CGD|CAL0002247 [details] [associations]
symbol:PEX1 species:5476 "Candida albicans" [GO:0016887
"ATPase activity" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0016562 "protein
import into peroxisome matrix, receptor recycling"
evidence=IEA;ISO] [GO:0005777 "peroxisome" evidence=ISO]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0004675 "transmembrane receptor protein
serine/threonine kinase activity" evidence=IEA] [GO:0042623 "ATPase
activity, coupled" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 CGD:CAL0002247 GO:GO:0005524 GO:GO:0005777
GO:GO:0016887 GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:AACQ01000020
EMBL:AACQ01000016 GO:GO:0042623 GO:GO:0016562 KO:K13338
PANTHER:PTHR23077:SF12 RefSeq:XP_720794.1 RefSeq:XP_721303.1
RefSeq:XP_888866.1 ProteinModelPortal:Q5AH73 STRING:Q5AH73
GeneID:3636943 GeneID:3637485 GeneID:3704188 KEGG:cal:CaO19.13818
KEGG:cal:CaO19.6460 KEGG:cal:CaO19_6460 Uniprot:Q5AH73
Length = 1091
Score = 495 (179.3 bits), Expect = 4.5e-52, Sum P(2) = 4.5e-52
Identities = 100/239 (41%), Positives = 147/239 (61%)
Query: 392 EEMERLTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKF 451
E +T E+A PS+ R ++ W D+GGL E ++ +++
Sbjct: 698 EATTNAAVTSEHIEKALAGYTPSNLRGVKLQKSSINWSDIGGLK----EAKNILLETLEW 753
Query: 452 PEEYEEFGVD----LETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGES 507
P +Y + L +G LLYG PGCGKTL+A A+A + G NFI IKGPE+LNKY+G S
Sbjct: 754 PTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAIAGQCGLNFISIKGPEILNKYIGAS 813
Query: 508 ELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVF 567
E +VR LF RA+ PCILFFDE D++ KRG + V +R++NQ+L ++DGA+ GV+
Sbjct: 814 EQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTGVTDRVVNQMLTQMDGAEGLDGVY 873
Query: 568 VIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 626
V+ AT+RPD++D A+LRPGR K + +P ++R IL+++ K + D V+LH IA+
Sbjct: 874 VLAATSRPDLIDSALLRPGRLDKSVICDMPNYEDRLDILQSITTKMDLSDDVNLHEIAE 932
Score = 235 (87.8 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 52/137 (37%), Positives = 82/137 (59%)
Query: 123 FQDLGGMESVLEELKMEVIV-PLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
+ D+GG++ + + +E + P + + +R +GILLYG PGCGKT LA AIA +
Sbjct: 734 WSDIGGLKEA-KNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAIAGQ 792
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREME 241
G+ F I E+++ GASE+++R+LF +A P I+F DE D+IA KR + +
Sbjct: 793 CGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTGVT 852
Query: 242 RRIVTQLMTCMDESHRL 258
R+V Q++T MD + L
Sbjct: 853 DRVVNQMLTQMDGAEGL 869
Score = 134 (52.2 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
V V+ AT+RPD +D AL RPGR D+ ++ +P+ R+ IL +T + + +L +IA
Sbjct: 872 VYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYEDRLDILQSITTKMDLSDDVNLHEIA 931
Query: 338 RSTPGF 343
T GF
Sbjct: 932 EKTTGF 937
Score = 83 (34.3 bits), Expect = 4.5e-52, Sum P(2) = 4.5e-52
Identities = 41/192 (21%), Positives = 77/192 (40%)
Query: 160 GILLYGPPGCGKTKLAHAIA---NETGVPFYK-ISATEVVS-GVSGASEENIRDLFSKAY 214
G L+YG G GKT L +A N+ F K IS +++ S+ +
Sbjct: 493 GTLVYGNSGSGKTLLLKLVAQQLNQQHGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCA 552
Query: 215 RTAPSIVFIDEIDAIAS-KRENLQREMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXX 273
PS++ +D ID + S + EN+ ++ ++ + + H +
Sbjct: 553 WNKPSVLILDNIDKLMSVEMENMDATKSNQLTEFFISNLTKIHHQLNSNLS--------- 603
Query: 274 XPGYVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILS-VLTRNLRVEGSFD 332
++ + N D ++ L + L PD++ R +IL LT L ++ D
Sbjct: 604 ------ILLSANSKDNINKLLLGSHLIENFHHLNPPDKSLRFEILDKYLTNKLGLKIKVD 657
Query: 333 LVKIARSTPGFV 344
L+ + T G++
Sbjct: 658 LMDLVSETEGYL 669
>UNIPROTKB|Q5AH73 [details] [associations]
symbol:PEX1 "Likely peroxisomal biogenesis AAA ATPase Pex1"
species:237561 "Candida albicans SC5314" [GO:0005777 "peroxisome"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0016562 "protein import into peroxisome matrix, receptor
recycling" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0046982 "protein heterodimerization activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002247 GO:GO:0005524 GO:GO:0005777 GO:GO:0016887
GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AACQ01000020 EMBL:AACQ01000016 GO:GO:0042623
GO:GO:0016562 KO:K13338 PANTHER:PTHR23077:SF12 RefSeq:XP_720794.1
RefSeq:XP_721303.1 RefSeq:XP_888866.1 ProteinModelPortal:Q5AH73
STRING:Q5AH73 GeneID:3636943 GeneID:3637485 GeneID:3704188
KEGG:cal:CaO19.13818 KEGG:cal:CaO19.6460 KEGG:cal:CaO19_6460
Uniprot:Q5AH73
Length = 1091
Score = 495 (179.3 bits), Expect = 4.5e-52, Sum P(2) = 4.5e-52
Identities = 100/239 (41%), Positives = 147/239 (61%)
Query: 392 EEMERLTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKF 451
E +T E+A PS+ R ++ W D+GGL E ++ +++
Sbjct: 698 EATTNAAVTSEHIEKALAGYTPSNLRGVKLQKSSINWSDIGGLK----EAKNILLETLEW 753
Query: 452 PEEYEEFGVD----LETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGES 507
P +Y + L +G LLYG PGCGKTL+A A+A + G NFI IKGPE+LNKY+G S
Sbjct: 754 PTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAIAGQCGLNFISIKGPEILNKYIGAS 813
Query: 508 ELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVF 567
E +VR LF RA+ PCILFFDE D++ KRG + V +R++NQ+L ++DGA+ GV+
Sbjct: 814 EQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTGVTDRVVNQMLTQMDGAEGLDGVY 873
Query: 568 VIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 626
V+ AT+RPD++D A+LRPGR K + +P ++R IL+++ K + D V+LH IA+
Sbjct: 874 VLAATSRPDLIDSALLRPGRLDKSVICDMPNYEDRLDILQSITTKMDLSDDVNLHEIAE 932
Score = 235 (87.8 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 52/137 (37%), Positives = 82/137 (59%)
Query: 123 FQDLGGMESVLEELKMEVIV-PLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
+ D+GG++ + + +E + P + + +R +GILLYG PGCGKT LA AIA +
Sbjct: 734 WSDIGGLKEA-KNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAIAGQ 792
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREME 241
G+ F I E+++ GASE+++R+LF +A P I+F DE D+IA KR + +
Sbjct: 793 CGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTGVT 852
Query: 242 RRIVTQLMTCMDESHRL 258
R+V Q++T MD + L
Sbjct: 853 DRVVNQMLTQMDGAEGL 869
Score = 134 (52.2 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
V V+ AT+RPD +D AL RPGR D+ ++ +P+ R+ IL +T + + +L +IA
Sbjct: 872 VYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYEDRLDILQSITTKMDLSDDVNLHEIA 931
Query: 338 RSTPGF 343
T GF
Sbjct: 932 EKTTGF 937
Score = 83 (34.3 bits), Expect = 4.5e-52, Sum P(2) = 4.5e-52
Identities = 41/192 (21%), Positives = 77/192 (40%)
Query: 160 GILLYGPPGCGKTKLAHAIA---NETGVPFYK-ISATEVVS-GVSGASEENIRDLFSKAY 214
G L+YG G GKT L +A N+ F K IS +++ S+ +
Sbjct: 493 GTLVYGNSGSGKTLLLKLVAQQLNQQHGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCA 552
Query: 215 RTAPSIVFIDEIDAIAS-KRENLQREMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXX 273
PS++ +D ID + S + EN+ ++ ++ + + H +
Sbjct: 553 WNKPSVLILDNIDKLMSVEMENMDATKSNQLTEFFISNLTKIHHQLNSNLS--------- 603
Query: 274 XPGYVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILS-VLTRNLRVEGSFD 332
++ + N D ++ L + L PD++ R +IL LT L ++ D
Sbjct: 604 ------ILLSANSKDNINKLLLGSHLIENFHHLNPPDKSLRFEILDKYLTNKLGLKIKVD 657
Query: 333 LVKIARSTPGFV 344
L+ + T G++
Sbjct: 658 LMDLVSETEGYL 669
>WB|WBGene00004195 [details] [associations]
symbol:prx-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
junction helicase activity" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040015 "negative
regulation of multicellular organism growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0040010 GO:GO:0002119 GO:GO:0040015 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00550000074953 EMBL:AB010968
EMBL:AB012224 EMBL:FO080622 PIR:T37276 RefSeq:NP_504268.1
UniGene:Cel.19362 ProteinModelPortal:G5EFR8 SMR:G5EFR8
EnsemblMetazoa:F39G3.7 GeneID:266912 KEGG:cel:CELE_F39G3.7
CTD:266912 WormBase:F39G3.7 OMA:AVATEFK NextBio:953402
Uniprot:G5EFR8
Length = 720
Score = 481 (174.4 bits), Expect = 1.2e-51, Sum P(2) = 1.2e-51
Identities = 108/224 (48%), Positives = 146/224 (65%)
Query: 419 GFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDL--ETGFLLYGPPGCGK 476
G IPNV+WEDVGGL+ E + ++ I+ FG +G +LYG PGCGK
Sbjct: 455 GAPKIPNVRWEDVGGLE----ETKQTVLESIRT----NLFGSRALKRSGIILYGSPGCGK 506
Query: 477 TLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTT 536
TLIAKAVA E F+ +KGPELLNKYVG+SE +R +F RA+ SPC++FFDE+D+L
Sbjct: 507 TLIAKAVATEFKIAFLSVKGPELLNKYVGQSEENLRKVFERAKQASPCVIFFDEIDSLAP 566
Query: 537 KRGKEG--GWVVERLLNQLLIELDGADKRK--GVFVIGATNRPDVMDRAVLRPGRFGKLL 592
RG+ G G V++R+++QLL ELD VFV+GATNRPD++D +++ PGRF KL+
Sbjct: 567 NRGRNGDSGGVIDRIVSQLLAELDKLHNSPLTKVFVMGATNRPDLLDNSLMTPGRFDKLV 626
Query: 593 YV-PLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
V P + + ILEA++RK ++ VDL IA SK E +SG
Sbjct: 627 EVKPGEDVESKTKILEAVSRKMRFEEDVDLREIA-SKVDEKMSG 669
Score = 295 (108.9 bits), Expect = 8.4e-23, P = 8.4e-23
Identities = 82/222 (36%), Positives = 123/222 (55%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPM--AGILLYGPPGCGKTKLAHAIA 179
R++D+GG LEE K V+ + L G R + +GI+LYG PGCGKT +A A+A
Sbjct: 463 RWEDVGG----LEETKQTVLESI-RTNL---FGSRALKRSGIILYGSPGCGKTLIAKAVA 514
Query: 180 NETGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR-ENLQR 238
E + F + E+++ G SEEN+R +F +A + +P ++F DEID++A R N
Sbjct: 515 TEFKIAFLSVKGPELLNKYVGQSEENLRKVFERAKQASPCVIFFDEIDSLAPNRGRNGDS 574
Query: 239 E-MERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRP 297
+ RIV+QL+ +D+ H P V V+GATNRPD +D +L P
Sbjct: 575 GGVIDRIVSQLLAELDKLHN--SPLTK-------------VFVMGATNRPDLLDNSLMTP 619
Query: 298 GRFDR--EIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
GRFD+ E+ G D ++ +IL ++R +R E DL +IA
Sbjct: 620 GRFDKLVEVKPG-EDVESKTKILEAVSRKMRFEEDVDLREIA 660
Score = 78 (32.5 bits), Expect = 1.2e-51, Sum P(2) = 1.2e-51
Identities = 23/98 (23%), Positives = 46/98 (46%)
Query: 161 ILLYGPPGCGKTKLAHAIANETGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSI 220
+L+ G G GK ++ A+ET F+++ E+V + SE + KA +
Sbjct: 261 LLVTGASGSGKRLMSRVFASETHRNFFEVDGYEMVCENASTSEAKWTSWWEKAKLLQNCV 320
Query: 221 VFIDEIDAIASKRENLQREMERRIVTQLMTCMDESHRL 258
+FI + +A + N ++RRI+ + + E ++
Sbjct: 321 LFIRNSNVLAIDQFNA---LDRRILQYMEQKLSEPSKI 355
>ASPGD|ASPL0000002697 [details] [associations]
symbol:pexA species:162425 "Emericella nidulans"
[GO:0006631 "fatty acid metabolic process" evidence=IMP]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0006625 "protein targeting to peroxisome" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005778
EMBL:BN001301 InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623
GO:GO:0006625 PANTHER:PTHR23077:SF12 HOGENOM:HOG000163138
EnsemblFungi:CADANIAT00007027 OMA:APIFAQC Uniprot:C8V3A3
Length = 1225
Score = 481 (174.4 bits), Expect = 3.6e-51, Sum P(4) = 3.6e-51
Identities = 98/232 (42%), Positives = 144/232 (62%)
Query: 392 EEMERLTITMTDFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKF 451
+E + + DF+ A K P+S R + +GGL HE + ++ +++
Sbjct: 813 DESRAIILGAADFDNAIKGFTPASLRNVTLTSSTTTFSAIGGL----HETRKMLLETLQY 868
Query: 452 PEEYEE-FG---VDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGES 507
P +Y F + L +G LLYG PGCGKT++A AVA E G NFI +KGPE+LNKY+G S
Sbjct: 869 PTKYAPIFAQCPLRLRSGLLLYGYPGCGKTMLASAVAGECGLNFISVKGPEILNKYIGAS 928
Query: 508 ELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVF 567
E +VR LF RA+ PCILFFDE D++ KRG + V +R++NQLL ++DGA+ GV+
Sbjct: 929 EKSVRDLFERAQAARPCILFFDEFDSIAPKRGHDSTGVTDRVVNQLLTQMDGAEGLSGVY 988
Query: 568 VIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSV 619
V+ AT+RPD++D A+LRPGR K L +P +R I+ A+++K + + V
Sbjct: 989 VLAATSRPDLIDPALLRPGRLDKSLLCDMPNHADRADIIRAVSKKLAMSNEV 1040
Score = 245 (91.3 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 67/190 (35%), Positives = 96/190 (50%)
Query: 123 FQDLGGMESVLEELKMEVIVPL-YHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
F +GG+ + L + P Y P Q +R +G+LLYG PGCGKT LA A+A E
Sbjct: 849 FSAIGGLHETRKMLLETLQYPTKYAPIFAQ-CPLRLRSGLLLYGYPGCGKTMLASAVAGE 907
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREME 241
G+ F + E+++ GASE+++RDLF +A P I+F DE D+IA KR + +
Sbjct: 908 CGLNFISVKGPEILNKYIGASEKSVRDLFERAQAARPCILFFDEFDSIAPKRGHDSTGVT 967
Query: 242 RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALR--RPGR 299
R+V QL+T MD + G P L+ A RP +D +L P
Sbjct: 968 DRVVNQLLTQMDGAE-----GLSGVYVLAATSRPD--LIDPALLRPGRLDKSLLCDMPNH 1020
Query: 300 FDR-EIVLGV 308
DR +I+ V
Sbjct: 1021 ADRADIIRAV 1030
Score = 52 (23.4 bits), Expect = 3.6e-51, Sum P(4) = 3.6e-51
Identities = 24/87 (27%), Positives = 38/87 (43%)
Query: 161 ILLYGPPGCGKTKL----AHAIANETGVPFYKISATEVVSGVSGAS--EENIRDLFSKAY 214
+L+ G G GKT L AH + E+ S ++V+ + S +E + LF A
Sbjct: 558 VLVTGGLGSGKTALGQLLAHRLQKESLFNVKYFSCRKLVTDETRISNIKETLNRLFMSAA 617
Query: 215 RTA----PSIVFIDEIDAIASKRENLQ 237
A S V +D++D + LQ
Sbjct: 618 WCARLGGQSTVILDDLDKLCPVETELQ 644
Score = 43 (20.2 bits), Expect = 3.6e-51, Sum P(4) = 3.6e-51
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 298 GRFDREIV-LGVPDENARVQILSVLT 322
G RE++ L PD+ R ++L LT
Sbjct: 692 GHVFREVIHLRAPDKEGRRKVLEYLT 717
Score = 38 (18.4 bits), Expect = 3.6e-51, Sum P(4) = 3.6e-51
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 668 IKLTHFEQALSKISPSVSELQIQRYKTLSETF 699
++ H E++L+ S+SE + +R + F
Sbjct: 1170 VRWEHMERSLNTTRSSLSEAERRRLLAIYREF 1201
>UNIPROTKB|G4N5K9 [details] [associations]
symbol:MGG_13203 "ATPase" species:242507 "Magnaporthe
oryzae 70-15" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CM001233 GO:GO:0017111 RefSeq:XP_003712009.1
ProteinModelPortal:G4N5K9 EnsemblFungi:MGG_13203T0 GeneID:5049070
KEGG:mgr:MGG_13203 Uniprot:G4N5K9
Length = 754
Score = 458 (166.3 bits), Expect = 1.5e-50, Sum P(2) = 1.5e-50
Identities = 111/311 (35%), Positives = 164/311 (52%)
Query: 398 TITMTDFEEATKM-VQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFP-EEY 455
T TD EA + ++P++ ++ P V+W+D+ G + ++ + R V I P EE
Sbjct: 451 TAFYTDSLEAALLEIRPTAMQDVNLKPPPVRWDDISGQESVKRDL-RLAVHFITRPKEEI 509
Query: 456 EEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLF 515
++F GFLLYGPPGC KT+ A+A+A E+G NF +KG ELLN YVGESE +R LF
Sbjct: 510 QKFIRVPPKGFLLYGPPGCSKTMTAQAMATESGLNFFAVKGAELLNMYVGESERQIRDLF 569
Query: 516 SRARTCSPCILFFDEVDALTTKR---GKEGGWVVER----LLNQLLIELDGADKRKGVFV 568
SRAR +P ++FFDE+D++ R G +GG + +L LL E+DG + +GVFV
Sbjct: 570 SRARAAAPSMIFFDEIDSIAGSRKGFGSDGGGATSQGGLNVLTTLLNEMDGFEDLRGVFV 629
Query: 569 IGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSK 628
+ ATNRP +D A++RPGRF +++YVP P P R IL + + VD +AQ
Sbjct: 630 LAATNRPHALDPAIMRPGRFDEIIYVPPPDPAAREAILRKNSAGCQLAPDVDFARLAQ-- 687
Query: 629 FCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPSVSELQ 688
E SG L S I + FE A++ +++
Sbjct: 688 LTEGNSGAEVAGTCQSAGKLAMRRSLDEPSSEG-----AISMADFEAAIAGQRKQITKQM 742
Query: 689 IQRYKTLSETF 699
++ Y + F
Sbjct: 743 LEGYAEWEKQF 753
Score = 332 (121.9 bits), Expect = 7.2e-27, P = 7.2e-27
Identities = 86/254 (33%), Positives = 128/254 (50%)
Query: 122 RFQDLGGMESVLEELKMEV-IVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIAN 180
R+ D+ G ESV +L++ V + ++ +++ V P G LLYGPPGC KT A A+A
Sbjct: 481 RWDDISGQESVKRDLRLAVHFITRPKEEIQKFIRVPPK-GFLLYGPPGCSKTMTAQAMAT 539
Query: 181 ETGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQRE- 239
E+G+ F+ + E+++ G SE IRDLFS+A APS++F DEID+IA R+ +
Sbjct: 540 ESGLNFFAVKGAELLNMYVGESERQIRDLFSRARAAAPSMIFFDEIDSIAGSRKGFGSDG 599
Query: 240 ---MERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRR 296
+ + L T ++E G V V+ ATNRP A+DPA+ R
Sbjct: 600 GGATSQGGLNVLTTLLNE-----MDGFEDLRG---------VFVLAATNRPHALDPAIMR 645
Query: 297 PGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXX 356
PGRFD I + PD AR IL + ++ D ++A+ T G
Sbjct: 646 PGRFDEIIYVPPPDPAAREAILRKNSAGCQLAPDVDFARLAQLTEGNSGAEVAGTCQSAG 705
Query: 357 XXXMKRIIDQRKSE 370
M+R +D+ SE
Sbjct: 706 KLAMRRSLDEPSSE 719
Score = 96 (38.9 bits), Expect = 1.5e-50, Sum P(2) = 1.5e-50
Identities = 40/163 (24%), Positives = 70/163 (42%)
Query: 160 GILLYGPPGCGKTKLAHAIANETGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPS 219
G++L+G G GKT L ++ +++ A++ ++I+D+F A S
Sbjct: 246 GLVLHGGSGTGKTMLLDHVSRTRWGSVHRVKASD--------KSKDIQDIFQTVTGQARS 297
Query: 220 IVFIDEIDAIASKRENLQREMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVL 279
IV ID++D + K +R ++ L+ + + + P V+
Sbjct: 298 IVLIDDLDELIDK----ERANRSTVINALVEGLVSVRQAI----------CDKEKPPKVI 343
Query: 280 VIGATNRPDAVDPA-LRRPGRFDREIVLGVPDENARVQILSVL 321
VI A + P LRRP R R I+L D + R ++S L
Sbjct: 344 VIAACRDYITIVPEKLRRPYRLQRAILLPPMDMSRRTAVISSL 386
>SGD|S000001680 [details] [associations]
symbol:PEX1 "AAA-peroxin" species:4932 "Saccharomyces
cerevisiae" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0042623
"ATPase activity, coupled" evidence=IEA] [GO:0006625 "protein
targeting to peroxisome" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA;IDA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IMP;IPI] [GO:0005777
"peroxisome" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS;IMP] [GO:0016562 "protein import into peroxisome
matrix, receptor recycling" evidence=IGI;IDA;IMP] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
SGD:S000001680 GO:GO:0005524 EMBL:BK006944 GO:GO:0016887
GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464 GO:GO:0042623
GO:GO:0016562 KO:K13338 PANTHER:PTHR23077:SF12
GeneTree:ENSGT00550000075032 OrthoDB:EOG4TQQJ3 EMBL:M58676
EMBL:Z28197 PIR:S38034 RefSeq:NP_012724.1 ProteinModelPortal:P24004
SMR:P24004 DIP:DIP-4266N IntAct:P24004 MINT:MINT-483826
STRING:P24004 PaxDb:P24004 EnsemblFungi:YKL197C GeneID:853636
KEGG:sce:YKL197C CYGD:YKL197c HOGENOM:HOG000163138 OMA:SAVAQQC
NextBio:974520 Genevestigator:P24004 GermOnline:YKL197C
Uniprot:P24004
Length = 1043
Score = 471 (170.9 bits), Expect = 1.8e-50, Sum P(3) = 1.8e-50
Identities = 96/223 (43%), Positives = 141/223 (63%)
Query: 399 ITMTDFEEATKMVQPSSRRE-GFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEE 457
+T F ++ PS+ R + N+KW D+G L + ++ +++P +YE
Sbjct: 666 VTRELFSKSLSAFTPSALRGVKLTKETNIKWGDIGALANAKD----VLLETLEWPTKYEP 721
Query: 458 FGVD----LETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRT 513
V+ L +G LLYG PGCGKTL+A AVA + G NFI +KGPE+LNK++G SE +R
Sbjct: 722 IFVNCPLRLRSGILLYGYPGCGKTLLASAVAQQCGLNFISVKGPEILNKFIGASEQNIRE 781
Query: 514 LFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATN 573
LF RA++ PCILFFDE D++ KRG + V +R++NQLL ++DGA+ GV+++ AT+
Sbjct: 782 LFERAQSVKPCILFFDEFDSIAPKRGHDSTGVTDRVVNQLLTQMDGAEGLDGVYILAATS 841
Query: 574 RPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPID 616
RPD++D A+LRPGR K + +PT ER IL+A+ K D
Sbjct: 842 RPDLIDSALLRPGRLDKSVICNIPTESERLDILQAIVNSKDKD 884
Score = 240 (89.5 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 71/226 (31%), Positives = 110/226 (48%)
Query: 122 RFQDLGGMESVLEELKMEVIVPL-YHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIAN 180
++ D+G + + + L + P Y P +R +GILLYG PGCGKT LA A+A
Sbjct: 695 KWGDIGALANAKDVLLETLEWPTKYEPIFVN-CPLRLRSGILLYGYPGCGKTLLASAVAQ 753
Query: 181 ETGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREM 240
+ G+ F + E+++ GASE+NIR+LF +A P I+F DE D+IA KR + +
Sbjct: 754 QCGLNFISVKGPEILNKFIGASEQNIRELFERAQSVKPCILFFDEFDSIAPKRGHDSTGV 813
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPAL--RRPG 298
R+V QL+T MD + G P L+ A RP +D ++ P
Sbjct: 814 TDRVVNQLLTQMDGAE-----GLDGVYILAATSRPD--LIDSALLRPGRLDKSVICNIPT 866
Query: 299 RFDR-EIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
+R +I+ + + + + +E + DL IA T GF
Sbjct: 867 ESERLDILQAIVNSKDK----DTGQKKFALEKNADLKLIAEKTAGF 908
Score = 73 (30.8 bits), Expect = 1.8e-50, Sum P(3) = 1.8e-50
Identities = 22/77 (28%), Positives = 37/77 (48%)
Query: 161 ILLYGPPGCGKTKLAHAIANETGVP---FYKISATEVVSGVSGA--SEENIRDLFSKAYR 215
I+L G G GKT+L + NE F K + E + S +++ I + S Y
Sbjct: 457 IILDGKQGIGKTRLLKELINEVEKDHHIFVKYADCETLHETSNLDKTQKLIMEWCSFCYW 516
Query: 216 TAPSIVFIDEIDAIASK 232
PS++ +D ++A+ K
Sbjct: 517 YGPSLIVLDNVEALFGK 533
Score = 40 (19.1 bits), Expect = 1.8e-50, Sum P(3) = 1.8e-50
Identities = 8/45 (17%), Positives = 25/45 (55%)
Query: 656 SSKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETFK 700
S+ ++S++T + + +A + PS+S ++ + + + + F+
Sbjct: 977 STSAASELTA-VVTINDLLEACQETKPSISTSELVKLRGIYDRFQ 1020
>WB|WBGene00004191 [details] [associations]
symbol:prx-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0006625 "protein targeting
to peroxisome" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0040010 GO:GO:0005778 HSSP:Q01853 GO:GO:0042623
GO:GO:0006625 PANTHER:PTHR23077:SF12 GeneTree:ENSGT00550000075032
EMBL:Z70205 UniGene:Cel.18145 GeneID:181538 KEGG:cel:CELE_C11H1.4
CTD:181538 NextBio:914356 EMBL:AB054992 PIR:T19207 PIR:T19208
RefSeq:NP_510386.2 ProteinModelPortal:G5ED99 SMR:G5ED99
EnsemblMetazoa:C11H1.4a WormBase:C11H1.4a OMA:PYPEHGI
Uniprot:G5ED99
Length = 996
Score = 461 (167.3 bits), Expect = 2.7e-48, Sum P(2) = 2.7e-48
Identities = 100/232 (43%), Positives = 147/232 (63%)
Query: 399 ITMTDFEEATK--MVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYE 456
IT + E+A + + + E +P + EDVGG+ + ++ I+ K+P+ +E
Sbjct: 698 ITEIEVEKAFECFVAGKMGKIEDGQVLPTM--EDVGGMFEQKKLLEQVIIWPRKYPQLFE 755
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFS 516
GV + G LL+GP GCGKTL+A A + + + +++KGPELL+KY+G SE VR +F
Sbjct: 756 SVGVPVSKGILLHGPSGCGKTLLANATISNSNFSVVNVKGPELLSKYIGASEENVRLVFE 815
Query: 517 RARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADK-RKGVFVIGATNRP 575
+AR+C+PCILFFDE+D+L KRG + V +R++NQLL ELDGA+ KGV ++G T+R
Sbjct: 816 KARSCAPCILFFDELDSLAPKRGHDSTGVTDRVVNQLLTELDGAEGGMKGVIILGCTSRI 875
Query: 576 DVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARK-KPIDDSVDLHTIAQ 626
D++D A+LRPGRF +Y P ER I++ L K KP D VD +AQ
Sbjct: 876 DLIDDALLRPGRFDHHVYCGHPEKTERLDIMKVLTNKLKPTD--VDFECLAQ 925
Score = 332 (121.9 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 78/206 (37%), Positives = 117/206 (56%)
Query: 121 PRFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIAN 180
P +D+GGM + L+ +I P +PQL + +GV GILL+GP GCGKT LA+A +
Sbjct: 725 PTMEDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLANATIS 784
Query: 181 ETGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREM 240
+ + E++S GASEEN+R +F KA AP I+F DE+D++A KR + +
Sbjct: 785 NSNFSVVNVKGPELLSKYIGASEENVRLVFEKARSCAPCILFFDELDSLAPKRGHDSTGV 844
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRF 300
R+V QL+T +D + + G V+++G T+R D +D AL RPGRF
Sbjct: 845 TDRVVNQLLTELDGA----EGGMKG------------VIILGCTSRIDLIDDALLRPGRF 888
Query: 301 DREIVLGVPDENARVQILSVLTRNLR 326
D + G P++ R+ I+ VLT L+
Sbjct: 889 DHHVYCGHPEKTERLDIMKVLTNKLK 914
Score = 80 (33.2 bits), Expect = 2.7e-48, Sum P(2) = 2.7e-48
Identities = 23/85 (27%), Positives = 42/85 (49%)
Query: 161 ILLYGPPGCGKT----KLAHAIANETGVPFYKISATEVVSGVSG-ASEENIRDLFSKAYR 215
+++ G G GKT KLA +++ + V F K+ ++ G S E+ + D +
Sbjct: 504 VMVLGGNGSGKTTFIKKLARRLSHNSSVTFCKMVPCALLKGRSADIIEKLLSDTLHEMEV 563
Query: 216 TAPSIVFIDEIDAIASKRENLQREM 240
PS +F+D+ D I + + QR +
Sbjct: 564 KKPSCLFLDDFDVILPQIDQEQRHL 588
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 97/208 (46%), Positives = 134/208 (64%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
PNV++ED+GGL+ E + +K PE +E+ G++ G LLYGPPG GKTL+AKAV
Sbjct: 165 PNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAV 224
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
A E A FI + G EL+ K++GE V+ +F A+ +P I+F DE+DA+ KR
Sbjct: 225 ATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALT 284
Query: 542 GG-WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
GG V+R L QLL E+DG D R V +IGATNRPD++D A+LRPGRF +++ VP PD
Sbjct: 285 GGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVP--APD 342
Query: 601 ERGL--ILEALARKKPIDDSVDLHTIAQ 626
E+G IL+ RK + + V+L IA+
Sbjct: 343 EKGRLEILKIHTRKMNLAEDVNLEEIAK 370
Score = 428 (155.7 bits), Expect = 2.3e-42, Sum P(2) = 2.3e-42
Identities = 94/223 (42%), Positives = 133/223 (59%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
R++D+GG+E ++E++ V +PL HP+L + +G+ P GILLYGPPG GKT LA A+A E
Sbjct: 168 RYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATE 227
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREME 241
T F ++ +E+V G ++D+F A APSI+FIDEIDAIA+KR + +
Sbjct: 228 TNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTGGD 287
Query: 242 RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFD 301
R + LM + E G G V +IGATNRPD +DPA+ RPGRFD
Sbjct: 288 REVQRTLMQLLAE-----MDGFDAR---------GDVKIIGATNRPDILDPAILRPGRFD 333
Query: 302 REIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFV 344
R I + PDE R++IL + TR + + +L +IA+ T G V
Sbjct: 334 RIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCV 376
Score = 37 (18.1 bits), Expect = 2.3e-42, Sum P(2) = 2.3e-42
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 473 GC-GKTLIAKAVANEAGANFI 492
GC G L KA+ EAG N I
Sbjct: 374 GCVGAEL--KAICTEAGMNAI 392
>UNIPROTKB|P96281 [details] [associations]
symbol:Rv0435c "Transitional endoplasmic reticulum ATPase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005618
GO:GO:0051301 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842573 HSSP:Q01853 HOGENOM:HOG000223225 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 KO:K13525
SMART:SM01073 EMBL:CP003248 PIR:A70632 RefSeq:NP_214949.1
RefSeq:NP_334860.1 RefSeq:YP_006513761.1 SMR:P96281
EnsemblBacteria:EBMYCT00000001241 EnsemblBacteria:EBMYCT00000071017
GeneID:13318302 GeneID:886352 GeneID:923768 KEGG:mtc:MT0451
KEGG:mtu:Rv0435c KEGG:mtv:RVBD_0435c PATRIC:18122702
TubercuList:Rv0435c OMA:KTHGFAG ProtClustDB:CLSK871802
Uniprot:P96281
Length = 728
Score = 411 (149.7 bits), Expect = 1.4e-43, Sum P(2) = 1.4e-43
Identities = 89/226 (39%), Positives = 134/226 (59%)
Query: 403 DFEEATKMVQPSSRREGFSA-IPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVD 461
D A +++P SR + +V +DVG + + ++ ++ P+ + GV+
Sbjct: 437 DLLGALTVIRPLSRSASDEVTVGDVTLDDVGDMAAAKQALTEAVLWPLQHPDTFARLGVE 496
Query: 462 LETGFLLYGPPGCGKTLIAKAVANEAGANFIH-IKGPELLNKYVGESELAVRTLFSRART 520
G LLYGPPGCGKT + +A+A+ G +H +KG EL++K+VG SE AVR LF RAR
Sbjct: 497 PPRGVLLYGPPGCGKTFVVRALAS-TGQLSVHAVKGSELMDKWVGSSEKAVRELFRRARD 555
Query: 521 CSPCILFFDEVDALTTKRGKE-GGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMD 579
+P ++F DE+DAL +RG+ V +R++ LL ELDG D + V ++GATNRPD++D
Sbjct: 556 SAPSLVFLDELDALAPRRGQSFDSGVSDRVVAALLTELDGIDPLRDVVMLGATNRPDLID 615
Query: 580 RAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
A+LRPGR +L++V P R IL + P+ VDL +A
Sbjct: 616 PALLRPGRLERLVFVEPPDAAARREILRTAGKSIPLSSDVDLDEVA 661
Score = 356 (130.4 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 83/242 (34%), Positives = 131/242 (54%)
Query: 125 DLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGV 184
D+G M + + L V+ PL HP LGV P G+LLYGPPGCGKT + A+A+ +
Sbjct: 465 DVGDMAAAKQALTEAVLWPLQHPDTFARLGVEPPRGVLLYGPPGCGKTFVVRALASTGQL 524
Query: 185 PFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR-ENLQREMERR 243
+ + +E++ G+SE+ +R+LF +A +APS+VF+DE+DA+A +R ++ + R
Sbjct: 525 SVHAVKGSELMDKWVGSSEKAVRELFRRARDSAPSLVFLDELDALAPRRGQSFDSGVSDR 584
Query: 244 IVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDRE 303
+V L+T +D + P V+++GATNRPD +DPAL RPGR +R
Sbjct: 585 VVAALLTELDG----IDPLRD-------------VVMLGATNRPDLIDPALLRPGRLERL 627
Query: 304 IVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXXMKRI 363
+ + PD AR +IL +++ + DL ++A G+ M+R
Sbjct: 628 VFVEPPDAAARREILRTAGKSIPLSSDVDLDEVAAGLDGYSAADCVALLREAALTAMRRS 687
Query: 364 ID 365
ID
Sbjct: 688 ID 689
Score = 150 (57.9 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 54/202 (26%), Positives = 85/202 (42%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P ++ E++ G + ++ + P + G G L+ GP G GK + +AV
Sbjct: 208 PEIQIEELKGAQPQAAKLTEWLKLALDEPHLLQTLGAGTNLGVLVSGPAGVGKATLVRAV 267
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGG 543
+ G + + GPE+ G+ AV + R +L D DAL
Sbjct: 268 CD--GRRLVTLDGPEIGALAAGDRVKAVASAVQAVRHEGGVLLITD-ADALLPA------ 318
Query: 544 WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERG 603
E + + +L EL A GV +I + RPD +D + P + L +PLP R
Sbjct: 319 -AAEPVASLILSELRTAVATAGVVLIATSARPDQLDARLRSPELCDRELGLPLPDAATRK 377
Query: 604 LILEALARKKPIDDSVDLHTIA 625
+LEAL P D ++L IA
Sbjct: 378 SLLEALLNPVPTGD-LNLDEIA 398
Score = 112 (44.5 bits), Expect = 1.4e-43, Sum P(2) = 1.4e-43
Identities = 36/121 (29%), Positives = 53/121 (43%)
Query: 224 DEIDAIASKRENLQREMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGA 283
D + A+AS + ++ E ++T + + V G VL I
Sbjct: 288 DRVKAVASAVQAVRHEGGVLLITDADALLPAAAEPVA-SLILSELRTAVATAGVVL-IAT 345
Query: 284 TNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
+ RPD +D LR P DRE+ L +PD R +L L + G +L +IA TPGF
Sbjct: 346 SARPDQLDARLRSPELCDRELGLPLPDAATRKSLLEALLNPVPT-GDLNLDEIASRTPGF 404
Query: 344 V 344
V
Sbjct: 405 V 405
Score = 80 (33.2 bits), Expect = 3.2e-40, Sum P(2) = 3.2e-40
Identities = 26/108 (24%), Positives = 48/108 (44%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
+ ++L G + +L + + L P L Q LG G+L+ GP G GK L A+ +
Sbjct: 211 QIEELKGAQPQAAKLTEWLKLALDEPHLLQTLGAGTNLGVLVSGPAGVGKATLVRAVCD- 269
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAI 229
G + E+ + +G + + +A R ++ I + DA+
Sbjct: 270 -GRRLVTLDGPEIGALAAGDRVKAVASAV-QAVRHEGGVLLITDADAL 315
>FB|FBgn0013563 [details] [associations]
symbol:Pex1 "Peroxin 1" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization"
evidence=ISS;IMP] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0042623 "ATPase activity, coupled" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006625 "protein targeting to
peroxisome" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0048137 "spermatocyte division" evidence=IMP]
[GO:0021782 "glial cell development" evidence=IMP] [GO:0007422
"peripheral nervous system development" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:AE014296
GO:GO:0006200 GO:GO:0007422 GO:GO:0007417 GO:GO:0007031
GO:GO:0005778 HSSP:Q01853 eggNOG:COG0464 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0048137 UniGene:Dm.10724
GO:GO:0021782 GO:GO:0006625 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 GeneTree:ENSGT00550000075032 EMBL:AY075423
RefSeq:NP_652016.1 SMR:Q9VUC7 IntAct:Q9VUC7 MINT:MINT-335404
STRING:Q9VUC7 EnsemblMetazoa:FBtr0075777 GeneID:45460
KEGG:dme:Dmel_CG6760 UCSC:CG6760-RA FlyBase:FBgn0013563
InParanoid:Q9VUC7 OMA:VLMWPSR OrthoDB:EOG4BNZSX GenomeRNAi:45460
NextBio:838158 Uniprot:Q9VUC7
Length = 1006
Score = 431 (156.8 bits), Expect = 3.8e-43, Sum P(2) = 3.8e-43
Identities = 98/280 (35%), Positives = 147/280 (52%)
Query: 414 SSRREGFSAIPN-VKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPP 472
S++R G A N ++ E++ GL+ + + ++ ++P + + + G LLYGPP
Sbjct: 704 SNQRTGNDADANEMRVEELPGLESVVGVLEEVLMWPSRYPTIFNASPLRNQAGVLLYGPP 763
Query: 473 GCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVD 532
G GKT + +A I +KGPELL KY+G+SE VR LF+RAR+ PC+LFFDE D
Sbjct: 764 GTGKTYLVSQLATSWNLRIISVKGPELLAKYIGQSEENVRNLFNRARSARPCVLFFDEFD 823
Query: 533 ALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLL 592
+L KRG + V +R++NQLL ELDG + +GV VI AT+RP+++D A+LR GR +L+
Sbjct: 824 SLAPKRGHDSTGVTDRVVNQLLTELDGVEGLQGVTVIAATSRPELLDPALLRSGRIDRLV 883
Query: 593 YVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXX 652
PLP R I EAL+ +D+ VD A N +G
Sbjct: 884 ECPLPDAPARVRIFEALSSTLSLDECVDFDWFAGKT--ANYTGADIQSILTSANMAAVKE 941
Query: 653 KLISSKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRY 692
L ++K H ++ PS+S + +Y
Sbjct: 942 ALAQFGHEKLAKKISLKQKHLIESFQTTRPSLSASDVAKY 981
Score = 228 (85.3 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 48/132 (36%), Positives = 78/132 (59%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
R ++L G+ESV+ L+ ++ P +P + +R AG+LLYGPPG GKT L +A
Sbjct: 718 RVEELPGLESVVGVLEEVLMWPSRYPTIFNASPLRNQAGVLLYGPPGTGKTYLVSQLATS 777
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREME 241
+ + E+++ G SEEN+R+LF++A P ++F DE D++A KR + +
Sbjct: 778 WNLRIISVKGPELLAKYIGQSEENVRNLFNRARSARPCVLFFDEFDSLAPKRGHDSTGVT 837
Query: 242 RRIVTQLMTCMD 253
R+V QL+T +D
Sbjct: 838 DRVVNQLLTELD 849
Score = 121 (47.7 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 29/89 (32%), Positives = 41/89 (46%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
V VI AT+RP+ +DPAL R GR DR + +PD ARV+I L+ L ++ D A
Sbjct: 857 VTVIAATSRPELLDPALLRSGRIDRLVECPLPDAPARVRIFEALSSTLSLDECVDFDWFA 916
Query: 338 RSTPGFVXXXXXXXXXXXXXXXMKRIIDQ 366
T + +K + Q
Sbjct: 917 GKTANYTGADIQSILTSANMAAVKEALAQ 945
Score = 90 (36.7 bits), Expect = 3.8e-43, Sum P(2) = 3.8e-43
Identities = 53/223 (23%), Positives = 91/223 (40%)
Query: 129 MESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETG-VPFY 187
++ V++EL+M + + + + Q +LL G G GKT L I ++ P Y
Sbjct: 455 VDQVVQELRMNLCLSADNSVMRQ-------CNVLLAGASGTGKTVLVERILDQLSRKPDY 507
Query: 188 KISATEVVSGVSGASEENI----RDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERR 243
S G E+I R++F+ + AP+IV ++ +D +A Q +
Sbjct: 508 CHFEFFHGSRSKGRKTESIQKDLRNIFTSCLQHAPAIVVLENLDVLAHAAGE-QSSQDGE 566
Query: 244 IVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRP-GRFDR 302
++ D ++L+ + VI N ++ L P GR
Sbjct: 567 YYNRMA---DTVYQLI----------VQYTTNNAIAVIATVNELQTLNKRLSSPRGRHVF 613
Query: 303 EIVLGVPD-ENA-RVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
+ V +P+ E A R IL L ++ V DLVK + T G+
Sbjct: 614 QTVARLPNLERADREIILRELCSHINVAKDLDLVKFSNLTEGY 656
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 419 (152.6 bits), Expect = 5.6e-42, Sum P(2) = 5.6e-42
Identities = 88/203 (43%), Positives = 123/203 (60%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
PNVK+ D+GGLD + E + + PE YE+ G++ G L+YGPPG GKT++ KAV
Sbjct: 133 PNVKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAV 192
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
ANE FI + G E + KY+GE VR +F AR SP I+F DEVDA+ TKR +
Sbjct: 193 ANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDAQT 252
Query: 542 GG-WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R+L +LL ++DG DK V VI ATNR D +D A+LRPGR + + PLP
Sbjct: 253 GADREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRK 312
Query: 601 ERGLILEALARKKPIDDSVDLHT 623
++ LI + + K + V++ +
Sbjct: 313 QKRLIFQTIISKMNVSSDVNIES 335
Score = 344 (126.2 bits), Expect = 1.2e-30, P = 1.2e-30
Identities = 82/215 (38%), Positives = 117/215 (54%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
++ DLGG++ +E+K V +PL P+L + +G+ P GIL+YGPPG GKT L A+ANE
Sbjct: 136 KYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANE 195
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREME 241
T V F + +E V G +RD+F A +PSI+FIDE+DAIA+KR + Q +
Sbjct: 196 TQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDAQTGAD 255
Query: 242 R---RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPG 298
R RI+ +L+ MD + V VI ATNR D +DPAL RPG
Sbjct: 256 REVQRILLELLNQMDGFDKSTN-----------------VKVIMATNRADTLDPALLRPG 298
Query: 299 RFDREIVLGVPDENARVQILSVLTRNLRVEGSFDL 333
R DR+I +PD + I + + V ++
Sbjct: 299 RLDRKIEFPLPDRKQKRLIFQTIISKMNVSSDVNI 333
Score = 45 (20.9 bits), Expect = 5.6e-42, Sum P(2) = 5.6e-42
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 277 YVLVIGATNRPD---AVDPALRRPGRFDREIVLGVPDEN-ARVQILSVLTR-NLRVE--G 329
YV ++ N+ D +V AL R IV +P E+ + +Q+L + R N++ G
Sbjct: 85 YVRILSTLNKEDLKPSVSVALHR---HSHSIVNILPSESDSSIQLLQITERPNVKYTDLG 141
Query: 330 SFDLVK 335
D+ K
Sbjct: 142 GLDMQK 147
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 419 (152.6 bits), Expect = 5.6e-42, Sum P(2) = 5.6e-42
Identities = 88/203 (43%), Positives = 123/203 (60%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
PNVK+ D+GGLD + E + + PE YE+ G++ G L+YGPPG GKT++ KAV
Sbjct: 133 PNVKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAV 192
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
ANE FI + G E + KY+GE VR +F AR SP I+F DEVDA+ TKR +
Sbjct: 193 ANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDAQT 252
Query: 542 GG-WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R+L +LL ++DG DK V VI ATNR D +D A+LRPGR + + PLP
Sbjct: 253 GADREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRK 312
Query: 601 ERGLILEALARKKPIDDSVDLHT 623
++ LI + + K + V++ +
Sbjct: 313 QKRLIFQTIISKMNVSSDVNIES 335
Score = 344 (126.2 bits), Expect = 1.2e-30, P = 1.2e-30
Identities = 82/215 (38%), Positives = 117/215 (54%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
++ DLGG++ +E+K V +PL P+L + +G+ P GIL+YGPPG GKT L A+ANE
Sbjct: 136 KYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANE 195
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREME 241
T V F + +E V G +RD+F A +PSI+FIDE+DAIA+KR + Q +
Sbjct: 196 TQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDAQTGAD 255
Query: 242 R---RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPG 298
R RI+ +L+ MD + V VI ATNR D +DPAL RPG
Sbjct: 256 REVQRILLELLNQMDGFDKSTN-----------------VKVIMATNRADTLDPALLRPG 298
Query: 299 RFDREIVLGVPDENARVQILSVLTRNLRVEGSFDL 333
R DR+I +PD + I + + V ++
Sbjct: 299 RLDRKIEFPLPDRKQKRLIFQTIISKMNVSSDVNI 333
Score = 45 (20.9 bits), Expect = 5.6e-42, Sum P(2) = 5.6e-42
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 277 YVLVIGATNRPD---AVDPALRRPGRFDREIVLGVPDEN-ARVQILSVLTR-NLRVE--G 329
YV ++ N+ D +V AL R IV +P E+ + +Q+L + R N++ G
Sbjct: 85 YVRILSTLNKEDLKPSVSVALHR---HSHSIVNILPSESDSSIQLLQITERPNVKYTDLG 141
Query: 330 SFDLVK 335
D+ K
Sbjct: 142 GLDMQK 147
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 399 (145.5 bits), Expect = 9.6e-41, Sum P(2) = 9.6e-41
Identities = 83/201 (41%), Positives = 122/201 (60%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+V + D+GG+D + E + + E Y++ G+D G L+YGPPGCGKT++AKAV
Sbjct: 160 PDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAV 219
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
A+ A FI + G E + KY+GE VR +F A+ +P I+F DE+DA+ TKR +
Sbjct: 220 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQT 279
Query: 542 GG-WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R+L +LL ++DG D+ V VI ATNR D +D A+LRPGR + + PLP
Sbjct: 280 GADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 339
Query: 601 ERGLILEALARKKPIDDSVDL 621
++ LI + K + + VDL
Sbjct: 340 QKRLIFSTITSKMNLSEEVDL 360
Score = 354 (129.7 bits), Expect = 9.2e-32, P = 9.2e-32
Identities = 84/214 (39%), Positives = 120/214 (56%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GGM+ +E++ V +PL H +L + +G+ P G+L+YGPPGCGKT LA A+A+ T
Sbjct: 164 YADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHT 223
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F ++ +E V G +RD+F A AP+I+FIDEIDAIA+KR + Q +R
Sbjct: 224 TAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADR 283
Query: 243 ---RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
RI+ +L+ MD + V V VI ATNR D +DPAL RPGR
Sbjct: 284 EVQRILLELLNQMDGFDQNVN-----------------VKVIMATNRADTLDPALLRPGR 326
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDL 333
DR+I +PD + I S +T + + DL
Sbjct: 327 LDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDL 360
Score = 57 (25.1 bits), Expect = 9.6e-41, Sum P(2) = 9.6e-41
Identities = 15/67 (22%), Positives = 34/67 (50%)
Query: 174 LAHAIANETGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFID-EIDAIASK 232
L I +E +P +S + G E++ DL+S+ + + F++ + + I +
Sbjct: 7 LVEKIQDE--IPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDE 64
Query: 233 RENLQRE 239
++NL++E
Sbjct: 65 QKNLKKE 71
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 399 (145.5 bits), Expect = 9.6e-41, Sum P(2) = 9.6e-41
Identities = 83/201 (41%), Positives = 122/201 (60%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+V + D+GG+D + E + + E Y++ G+D G L+YGPPGCGKT++AKAV
Sbjct: 160 PDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAV 219
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
A+ A FI + G E + KY+GE VR +F A+ +P I+F DE+DA+ TKR +
Sbjct: 220 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQT 279
Query: 542 GG-WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R+L +LL ++DG D+ V VI ATNR D +D A+LRPGR + + PLP
Sbjct: 280 GADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 339
Query: 601 ERGLILEALARKKPIDDSVDL 621
++ LI + K + + VDL
Sbjct: 340 QKRLIFSTITSKMNLSEEVDL 360
Score = 354 (129.7 bits), Expect = 9.2e-32, P = 9.2e-32
Identities = 84/214 (39%), Positives = 120/214 (56%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GGM+ +E++ V +PL H +L + +G+ P G+L+YGPPGCGKT LA A+A+ T
Sbjct: 164 YADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHT 223
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F ++ +E V G +RD+F A AP+I+FIDEIDAIA+KR + Q +R
Sbjct: 224 TAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADR 283
Query: 243 ---RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
RI+ +L+ MD + V V VI ATNR D +DPAL RPGR
Sbjct: 284 EVQRILLELLNQMDGFDQNVN-----------------VKVIMATNRADTLDPALLRPGR 326
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDL 333
DR+I +PD + I S +T + + DL
Sbjct: 327 LDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDL 360
Score = 57 (25.1 bits), Expect = 9.6e-41, Sum P(2) = 9.6e-41
Identities = 15/67 (22%), Positives = 34/67 (50%)
Query: 174 LAHAIANETGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFID-EIDAIASK 232
L I +E +P +S + G E++ DL+S+ + + F++ + + I +
Sbjct: 7 LVEKIQDE--IPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDE 64
Query: 233 RENLQRE 239
++NL++E
Sbjct: 65 QKNLKKE 71
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 399 (145.5 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 83/201 (41%), Positives = 122/201 (60%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+V + D+GG+D + E + + E Y++ G+D G L+YGPPGCGKT++AKAV
Sbjct: 160 PDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAV 219
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
A+ A FI + G E + KY+GE VR +F A+ +P I+F DE+DA+ TKR +
Sbjct: 220 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQT 279
Query: 542 GG-WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R+L +LL ++DG D+ V VI ATNR D +D A+LRPGR + + PLP
Sbjct: 280 GADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 339
Query: 601 ERGLILEALARKKPIDDSVDL 621
++ LI + K + + VDL
Sbjct: 340 QKRLIFSTITSKMNLSEEVDL 360
Score = 354 (129.7 bits), Expect = 9.2e-32, P = 9.2e-32
Identities = 84/214 (39%), Positives = 120/214 (56%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GGM+ +E++ V +PL H +L + +G+ P G+L+YGPPGCGKT LA A+A+ T
Sbjct: 164 YADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHT 223
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F ++ +E V G +RD+F A AP+I+FIDEIDAIA+KR + Q +R
Sbjct: 224 TAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADR 283
Query: 243 ---RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
RI+ +L+ MD + V V VI ATNR D +DPAL RPGR
Sbjct: 284 EVQRILLELLNQMDGFDQNVN-----------------VKVIMATNRADTLDPALLRPGR 326
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDL 333
DR+I +PD + I S +T + + DL
Sbjct: 327 LDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDL 360
Score = 56 (24.8 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 12/57 (21%), Positives = 30/57 (52%)
Query: 184 VPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFID-EIDAIASKRENLQRE 239
+P +S + G E++ DL+S+ + + F++ + + I +++NL++E
Sbjct: 15 IPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKE 71
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 399 (145.5 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 83/201 (41%), Positives = 122/201 (60%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+V + D+GG+D + E + + E Y++ G+D G L+YGPPGCGKT++AKAV
Sbjct: 160 PDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAV 219
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
A+ A FI + G E + KY+GE VR +F A+ +P I+F DE+DA+ TKR +
Sbjct: 220 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQT 279
Query: 542 GG-WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R+L +LL ++DG D+ V VI ATNR D +D A+LRPGR + + PLP
Sbjct: 280 GADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 339
Query: 601 ERGLILEALARKKPIDDSVDL 621
++ LI + K + + VDL
Sbjct: 340 QKRLIFSTITSKMNLSEEVDL 360
Score = 354 (129.7 bits), Expect = 9.2e-32, P = 9.2e-32
Identities = 84/214 (39%), Positives = 120/214 (56%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GGM+ +E++ V +PL H +L + +G+ P G+L+YGPPGCGKT LA A+A+ T
Sbjct: 164 YADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHT 223
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F ++ +E V G +RD+F A AP+I+FIDEIDAIA+KR + Q +R
Sbjct: 224 TAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADR 283
Query: 243 ---RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
RI+ +L+ MD + V V VI ATNR D +DPAL RPGR
Sbjct: 284 EVQRILLELLNQMDGFDQNVN-----------------VKVIMATNRADTLDPALLRPGR 326
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDL 333
DR+I +PD + I S +T + + DL
Sbjct: 327 LDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDL 360
Score = 56 (24.8 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 12/57 (21%), Positives = 30/57 (52%)
Query: 184 VPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFID-EIDAIASKRENLQRE 239
+P +S + G E++ DL+S+ + + F++ + + I +++NL++E
Sbjct: 15 IPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKE 71
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 399 (145.5 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 83/201 (41%), Positives = 122/201 (60%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+V + D+GG+D + E + + E Y++ G+D G L+YGPPGCGKT++AKAV
Sbjct: 160 PDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAV 219
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
A+ A FI + G E + KY+GE VR +F A+ +P I+F DE+DA+ TKR +
Sbjct: 220 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQT 279
Query: 542 GG-WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R+L +LL ++DG D+ V VI ATNR D +D A+LRPGR + + PLP
Sbjct: 280 GADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 339
Query: 601 ERGLILEALARKKPIDDSVDL 621
++ LI + K + + VDL
Sbjct: 340 QKRLIFSTITSKMNLSEEVDL 360
Score = 354 (129.7 bits), Expect = 9.2e-32, P = 9.2e-32
Identities = 84/214 (39%), Positives = 120/214 (56%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GGM+ +E++ V +PL H +L + +G+ P G+L+YGPPGCGKT LA A+A+ T
Sbjct: 164 YADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHT 223
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F ++ +E V G +RD+F A AP+I+FIDEIDAIA+KR + Q +R
Sbjct: 224 TAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADR 283
Query: 243 ---RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
RI+ +L+ MD + V V VI ATNR D +DPAL RPGR
Sbjct: 284 EVQRILLELLNQMDGFDQNVN-----------------VKVIMATNRADTLDPALLRPGR 326
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDL 333
DR+I +PD + I S +T + + DL
Sbjct: 327 LDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDL 360
Score = 56 (24.8 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 12/57 (21%), Positives = 30/57 (52%)
Query: 184 VPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFID-EIDAIASKRENLQRE 239
+P +S + G E++ DL+S+ + + F++ + + I +++NL++E
Sbjct: 15 IPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKE 71
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 399 (145.5 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 83/201 (41%), Positives = 122/201 (60%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+V + D+GG+D + E + + E Y++ G+D G L+YGPPGCGKT++AKAV
Sbjct: 160 PDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAV 219
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
A+ A FI + G E + KY+GE VR +F A+ +P I+F DE+DA+ TKR +
Sbjct: 220 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQT 279
Query: 542 GG-WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R+L +LL ++DG D+ V VI ATNR D +D A+LRPGR + + PLP
Sbjct: 280 GADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 339
Query: 601 ERGLILEALARKKPIDDSVDL 621
++ LI + K + + VDL
Sbjct: 340 QKRLIFSTITSKMNLSEEVDL 360
Score = 354 (129.7 bits), Expect = 9.2e-32, P = 9.2e-32
Identities = 84/214 (39%), Positives = 120/214 (56%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GGM+ +E++ V +PL H +L + +G+ P G+L+YGPPGCGKT LA A+A+ T
Sbjct: 164 YADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHT 223
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F ++ +E V G +RD+F A AP+I+FIDEIDAIA+KR + Q +R
Sbjct: 224 TAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADR 283
Query: 243 ---RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
RI+ +L+ MD + V V VI ATNR D +DPAL RPGR
Sbjct: 284 EVQRILLELLNQMDGFDQNVN-----------------VKVIMATNRADTLDPALLRPGR 326
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDL 333
DR+I +PD + I S +T + + DL
Sbjct: 327 LDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDL 360
Score = 56 (24.8 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 12/57 (21%), Positives = 30/57 (52%)
Query: 184 VPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFID-EIDAIASKRENLQRE 239
+P +S + G E++ DL+S+ + + F++ + + I +++NL++E
Sbjct: 15 IPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKE 71
>DICTYBASE|DDB_G0268066 [details] [associations]
symbol:DDB_G0268066 "putative ATPase" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0268066 GO:GO:0005524
EMBL:AAFI02000003 eggNOG:COG0464 GO:GO:0017111 RefSeq:XP_647530.1
ProteinModelPortal:Q55FK3 EnsemblProtists:DDB0189755 GeneID:8616337
KEGG:ddi:DDB_G0268066 OMA:ANFIPIN Uniprot:Q55FK3
Length = 864
Score = 440 (159.9 bits), Expect = 2.5e-39, P = 2.5e-39
Identities = 140/497 (28%), Positives = 226/497 (45%)
Query: 153 LGVRPMAGILLYGPPGCGKTKLAHAIANETGVPFYKISATEVVSGVSGASEENIRDLFSK 212
LG+ +LLYGP CGK+ L + I+ + G+ + I+ +++V ++ +K
Sbjct: 330 LGISKPKSLLLYGPQSCGKSTLINLISKQMGIKIFHINLSDLVKYQPNTKGLLLKYYQAK 389
Query: 213 AYRTAPSIVFIDEIDAIASKRENLQREMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXX 272
T SI+ D ID I + +N + + M+ L+
Sbjct: 390 QNTTTNSILLFDNIDEIFPQFDNTDSSNKNSNQQNINQLMNLFLNLLNNDNENNDNENNN 449
Query: 273 XXPGYVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNL--RVEGS 330
+ +IG TN+ ++ +R F+ EI + P++ R QI + + +E +
Sbjct: 450 -----IFIIGITNKIKILNNFIR--SNFEEEIRIDPPNQEKRKQIFNWNLKGFGENIENN 502
Query: 331 FDLV-KIARSTPGFVXXXXXXXXXXXXXXXMKRIIDQRKSELSGNSIAEQHSDDWWRQPW 389
++ KI ++ G + +KR K E N E+ DD +
Sbjct: 503 LKIIEKINENSNGLMGGDITILCRNAKIKSLKRY----KIE---N---EKQDDDEGGEEL 552
Query: 390 LPEE--MERLTITMTDF-EE-ATKMVQPSSRREGFS-AIPNVKWEDVGGLDYLRHEFDRY 444
L + + + DF EE + + + S +IP V W D+GGL+ +
Sbjct: 553 LIKSFNLNDIKFLENDFIEEFGGQYRKDKTMISKISPSIPKVLWSDIGGLEVAKDVLKEM 612
Query: 445 IVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYV 504
+V + + + GV G L+YGPPG GKT++AK VA EA ANFI I EL+ +
Sbjct: 613 VVWDYQHSDSIKRLGVKTPKGILMYGPPGTGKTMLAKCVAFEAKANFIPINISELIQGEI 672
Query: 505 GESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGA---- 560
GESE + +F A SP I+F DE+ ++ + ++L++QLLIELD
Sbjct: 673 GESEKTLSEIFRIAINSSPSIIFIDEIQSIFGLKESSNN-SSKKLISQLLIELDNTIGNN 731
Query: 561 DKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPI--DDS 618
D V ++ ATN P +D + LR GRF K +Y+ P DER I E L + I D +
Sbjct: 732 DGGNRVMILAATNMPQAIDPSFLRSGRFDKTVYIGPPEVDERKSIFETLIKNSSIKVDST 791
Query: 619 VDLHTIAQSKFCENLSG 635
VDL+ +A K+ N +G
Sbjct: 792 VDLNQLA--KYTINFTG 806
Score = 326 (119.8 bits), Expect = 4.6e-26, P = 4.6e-26
Identities = 84/287 (29%), Positives = 143/287 (49%)
Query: 61 SYSESKITRRKSEEKNIEFEVMPRKIDLVNAKSREVEMKKEESVXXXXXXXXXXXXXXXX 120
S KI K ++ E++ + +L + K E + +E
Sbjct: 532 SLKRYKIENEKQDDDEGGEELLIKSFNLNDIKFLENDFIEEFGGQYRKDKTMISKISPSI 591
Query: 121 PR--FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAI 178
P+ + D+GG+E + LK V+ H + LGV+ GIL+YGPPG GKT LA +
Sbjct: 592 PKVLWSDIGGLEVAKDVLKEMVVWDYQHSDSIKRLGVKTPKGILMYGPPGTGKTMLAKCV 651
Query: 179 ANETGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQR 238
A E F I+ +E++ G G SE+ + ++F A ++PSI+FIDEI +I +E+
Sbjct: 652 AFEAKANFIPINISELIQGEIGESEKTLSEIFRIAINSSPSIIFIDEIQSIFGLKES-SN 710
Query: 239 EMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPG 298
+++++QL+ +D + G V+++ ATN P A+DP+ R G
Sbjct: 711 NSSKKLISQLLIELDNTIGNNDGGNR-------------VMILAATNMPQAIDPSFLRSG 757
Query: 299 RFDREIVLGVPDENARVQILSVLTRN--LRVEGSFDLVKIARSTPGF 343
RFD+ + +G P+ + R I L +N ++V+ + DL ++A+ T F
Sbjct: 758 RFDKTVYIGPPEVDERKSIFETLIKNSSIKVDSTVDLNQLAKYTINF 804
Score = 132 (51.5 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 42/195 (21%), Positives = 82/195 (42%)
Query: 453 EEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVR 512
+ Y E G+ LLYGP CGK+ + ++ + G HI +L+ L ++
Sbjct: 325 KRYSELGISKPKSLLLYGPQSCGKSTLINLISKQMGIKIFHINLSDLVKYQPNTKGLLLK 384
Query: 513 TLFSRARTCSPCILFFDEVDAL------TTKRGKEGGWV-VERLLNQLLIELDGADKRK- 564
++ T + IL FD +D + T K + +L+N L L+ ++
Sbjct: 385 YYQAKQNTTTNSILLFDNIDEIFPQFDNTDSSNKNSNQQNINQLMNLFLNLLNNDNENND 444
Query: 565 ----GVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVD 620
+F+IG TN+ +++ + F + + + P ++R I K ++++
Sbjct: 445 NENNNIFIIGITNKIKILNNFIR--SNFEEEIRIDPPNQEKRKQIFNW--NLKGFGENIE 500
Query: 621 LHTIAQSKFCENLSG 635
+ K EN +G
Sbjct: 501 NNLKIIEKINENSNG 515
>FB|FBgn0035443 [details] [associations]
symbol:CG12010 species:7227 "Drosophila melanogaster"
[GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
UniGene:Dm.11249 GeneID:38421 KEGG:dme:Dmel_CG12010
FlyBase:FBgn0035443 GenomeRNAi:38421 NextBio:808578
RefSeq:NP_647812.1 ProteinModelPortal:Q9VZQ0 SMR:Q9VZQ0
IntAct:Q9VZQ0 MINT:MINT-874256 STRING:Q9VZQ0 PRIDE:Q9VZQ0
UCSC:CG12010-RA InParanoid:Q9VZQ0 OMA:GCAKTTI PhylomeDB:Q9VZQ0
ArrayExpress:Q9VZQ0 Bgee:Q9VZQ0 Uniprot:Q9VZQ0
Length = 736
Score = 388 (141.6 bits), Expect = 8.1e-39, Sum P(2) = 8.1e-39
Identities = 98/305 (32%), Positives = 154/305 (50%)
Query: 404 FEEATKMVQPSSRREGFSAIPNVK--WEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVD 461
F ++ QPS+ R + + +E +GG++ L+ ++ I+ + FG+
Sbjct: 442 FLKSLSQTQPSASRSTDVRVSKMTAGFEVIGGMEALKRTLQVSVLAGIRQSAAFARFGLS 501
Query: 462 LETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTC 521
L G LLYGPPGC KT +AK +A EA FI E+ + YVG +E + +F AR
Sbjct: 502 LPKGVLLYGPPGCAKTTVAKCLAKEADMTFIATSAAEVYSPYVGCAERFISRIFDTARKN 561
Query: 522 SPCILFFDEVDALTTKR----GKEGGWVVERLLNQLLIELDG---ADKRKGVFVIGATNR 574
+PC++F DE+D+L +R G GG V R+L+ LL E++G ++ + V+ ATNR
Sbjct: 562 APCLIFLDEIDSLVGRRTVSSGGGGGQVQLRILSTLLTEMNGIVGGGSQQHILVVAATNR 621
Query: 575 PDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLS 634
PD++D A+LRPGRF KL++VP P R +L+ +++ P ++V L IA + S
Sbjct: 622 PDMIDDALLRPGRFDKLIHVPAPDEKSRLALLKLHSQRMPFHENVFLQEIAART--DRYS 679
Query: 635 GXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKT 694
G D I+L FE+ L+K S+++ QI Y
Sbjct: 680 GADLCNLCNEAAIEAF---------QRDFKATEIELQDFEKVLTKQKSSLTQSQIDGYYK 730
Query: 695 LSETF 699
+ F
Sbjct: 731 FAYRF 735
Score = 304 (112.1 bits), Expect = 8.8e-24, P = 8.8e-24
Identities = 75/222 (33%), Positives = 120/222 (54%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
F+ +GGME++ L++ V+ + G+ G+LLYGPPGC KT +A +A E
Sbjct: 468 FEVIGGMEALKRTLQVSVLAGIRQSAAFARFGLSLPKGVLLYGPPGCAKTTVAKCLAKEA 527
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQR---- 238
+ F SA EV S G +E I +F A + AP ++F+DEID++ +R
Sbjct: 528 DMTFIATSAAEVYSPYVGCAERFISRIFDTARKNAPCLIFLDEIDSLVGRRTVSSGGGGG 587
Query: 239 EMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPG 298
+++ RI++ L+T E + +V G ++LV+ ATNRPD +D AL RPG
Sbjct: 588 QVQLRILSTLLT---EMNGIVGGGSQQ-----------HILVVAATNRPDMIDDALLRPG 633
Query: 299 RFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARST 340
RFD+ I + PDE +R+ +L + ++ + + L +IA T
Sbjct: 634 RFDKLIHVPAPDEKSRLALLKLHSQRMPFHENVFLQEIAART 675
Score = 95 (38.5 bits), Expect = 8.1e-39, Sum P(2) = 8.1e-39
Identities = 46/195 (23%), Positives = 79/195 (40%)
Query: 162 LLYGPPGCGKTKLAHAIANETGVPFYKISATEVVSGVSGASEENIRDLFSKAY----RTA 217
L+ GP CGK+ L + I+A++V+ G +EE +R +F A +
Sbjct: 224 LVVGPVDCGKSGLLSEFLRRHSCNCFYITASQVLRSYPGETEEELRRIFQAAQTFKEKLR 283
Query: 218 P-----SIVFIDEI--DAIASKRENLQREMERRIVTQLMTCMDESHRLVQPGXXXXXXXX 270
P S+ F EI I + E + ++ D +
Sbjct: 284 PLCNFHSVCFTFEILISFIFIVPIVILIE-DLELLCPSTAVADAKNSSNSLRISAELYKL 342
Query: 271 XXXXPGYVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGS 330
P ++ + + PD++ RR RF RE+ + +P E R Q++ L + S
Sbjct: 343 LDALPRGIICLATSGVPDSLHEHARR--RFVREVTINMPSEGQRRQLVEHLCEVHELNIS 400
Query: 331 FDLVK-IARSTPGFV 344
L++ IAR+T G+V
Sbjct: 401 QTLLEHIARNTQGYV 415
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 426 (155.0 bits), Expect = 1.9e-38, P = 1.9e-38
Identities = 91/204 (44%), Positives = 128/204 (62%)
Query: 426 VKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVAN 485
V +EDV G+D + E + I++ +K P+++ + G + G LL GPPG GKTL+A+AVA
Sbjct: 150 VTFEDVAGVDEAKEELEE-IIQFLKDPKKFTKLGGRIPKGVLLVGPPGTGKTLLARAVAG 208
Query: 486 EAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE-GGW 544
EAG F I G + + +VG VR LF + + +PCI+F DE+DA+ RG GG
Sbjct: 209 EAGVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCIIFIDEIDAVGRHRGAGLGGG 268
Query: 545 VVER--LLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDER 602
ER LNQLL+E+DG + +GV +I ATNRPDV+D A+LRPGRF + + VP P R
Sbjct: 269 HDEREQTLNQLLVEMDGFESNEGVILIAATNRPDVLDPALLRPGRFDRQVVVPQPDVKGR 328
Query: 603 GLILEALARKKPIDDSVDLHTIAQ 626
+IL+ +K P+ VDL IA+
Sbjct: 329 EMILKVHTKKTPLASDVDLGVIAR 352
Score = 369 (135.0 bits), Expect = 2.2e-31, P = 2.2e-31
Identities = 95/224 (42%), Positives = 122/224 (54%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
F+D+ G++ EEL+ E+I L P+ LG R G+LL GPPG GKT LA A+A E
Sbjct: 152 FEDVAGVDEAKEELE-EIIQFLKDPKKFTKLGGRIPKGVLLVGPPGTGKTLLARAVAGEA 210
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR-ENLQREME 241
GVPF+ IS ++ V G +RDLF + + AP I+FIDEIDA+ R L +
Sbjct: 211 GVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCIIFIDEIDAVGRHRGAGLGGGHD 270
Query: 242 RRIVT--QLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
R T QL+ MD G V++I ATNRPD +DPAL RPGR
Sbjct: 271 EREQTLNQLLVEMD----------------GFESNEG-VILIAATNRPDVLDPALLRPGR 313
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
FDR++V+ PD R IL V T+ + DL IAR TPGF
Sbjct: 314 FDRQVVVPQPDVKGREMILKVHTKKTPLASDVDLGVIARGTPGF 357
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 426 (155.0 bits), Expect = 3.2e-38, P = 3.2e-38
Identities = 89/203 (43%), Positives = 126/203 (62%)
Query: 426 VKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVAN 485
V++ DV G D + E +V +K P ++ E G + G LL GPPG GKTL+A+AVA
Sbjct: 159 VRFRDVAGADEEKQELVE-VVEFLKDPRKFAEVGARIPKGVLLVGPPGTGKTLLARAVAG 217
Query: 486 EAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE-GGW 544
EAG F I G + + +VG VR LF A+ +PCI+F DE+DA+ +RG GG
Sbjct: 218 EAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGG 277
Query: 545 VVER--LLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDER 602
ER LNQLL+E+DG +G+ +I ATNRPD++D A+LRPGRF + + V P + R
Sbjct: 278 HDEREQTLNQLLVEMDGFGANEGIIIIAATNRPDILDPALLRPGRFDRQITVDRPDVNGR 337
Query: 603 GLILEALARKKPIDDSVDLHTIA 625
+L+ AR KP+D++++L IA
Sbjct: 338 EAVLKVHARNKPLDENINLRAIA 360
Score = 369 (135.0 bits), Expect = 9.1e-32, Sum P(2) = 9.1e-32
Identities = 93/225 (41%), Positives = 124/225 (55%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
RF+D+ G + +EL +EV+ L P+ +G R G+LL GPPG GKT LA A+A E
Sbjct: 160 RFRDVAGADEEKQEL-VEVVEFLKDPRKFAEVGARIPKGVLLVGPPGTGKTLLARAVAGE 218
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR-ENLQREM 240
GVPF+ IS ++ V G +RDLF A + AP I+FIDEIDA+ +R L
Sbjct: 219 AGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGH 278
Query: 241 ERRIVT--QLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPG 298
+ R T QL+ MD G +++I ATNRPD +DPAL RPG
Sbjct: 279 DEREQTLNQLLVEMD----------------GFGANEG-IIIIAATNRPDILDPALLRPG 321
Query: 299 RFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
RFDR+I + PD N R +L V RN ++ + +L IA TPGF
Sbjct: 322 RFDRQITVDRPDVNGREAVLKVHARNKPLDENINLRAIATRTPGF 366
Score = 45 (20.9 bits), Expect = 9.1e-32, Sum P(2) = 9.1e-32
Identities = 14/60 (23%), Positives = 28/60 (46%)
Query: 533 ALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLL 592
A+ T+ G +E LLN+ + DK+K I ++ + DR + P + +++
Sbjct: 358 AIATRTPGFSGADLENLLNEAALVAARQDKKK----IDMSDIDEATDRVIAGPAKKSRVI 413
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 425 (154.7 bits), Expect = 3.2e-38, P = 3.2e-38
Identities = 89/204 (43%), Positives = 127/204 (62%)
Query: 426 VKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVAN 485
V + DV G+D ++ E IV +K P +Y E G + G LL+G PG GKTL+A+A+A
Sbjct: 155 VTFADVAGIDEVKEELAE-IVEFLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAG 213
Query: 486 EAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE-GGW 544
EAG F I G + + +VG VR LF +A+ +PCI+F DE+DA+ +RG GG
Sbjct: 214 EAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQRGAGLGGG 273
Query: 545 VVER--LLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDER 602
ER LNQLL+E+DG + +G+ +I ATNRPD++D A+LRPGRF + + V P + R
Sbjct: 274 HDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDTPDINGR 333
Query: 603 GLILEALARKKPIDDSVDLHTIAQ 626
IL+ + KP+ D VDL +A+
Sbjct: 334 KEILKVHVKGKPLGDDVDLDVLAR 357
Score = 378 (138.1 bits), Expect = 2.3e-32, Sum P(2) = 2.3e-32
Identities = 96/224 (42%), Positives = 125/224 (55%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
F D+ G++ V EEL E++ L +P+ LG R G+LL+G PG GKT LA AIA E
Sbjct: 157 FADVAGIDEVKEELA-EIVEFLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAGEA 215
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR-ENLQREME 241
GVPF+ IS ++ V G +RDLF +A + AP IVFIDEIDA+ +R L +
Sbjct: 216 GVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQRGAGLGGGHD 275
Query: 242 RRIVT--QLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
R T QL+ MD + G +++I ATNRPD +DPAL RPGR
Sbjct: 276 EREQTLNQLLVEMDGFNS--NEG---------------IIIIAATNRPDILDPALLRPGR 318
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
FDR IV+ PD N R +IL V + + DL +AR TPGF
Sbjct: 319 FDRHIVVDTPDINGRKEILKVHVKGKPLGDDVDLDVLARRTPGF 362
Score = 39 (18.8 bits), Expect = 2.3e-32, Sum P(2) = 2.3e-32
Identities = 14/55 (25%), Positives = 23/55 (41%)
Query: 494 IKGPELLNKYVGESELAVRTLFSRARTCSPCIL-FFDEVDALTT-KRGKEGGWVV 546
I GPE +K + E E + +L D V ++ RG+ GG+ +
Sbjct: 399 IAGPEKKSKVISEREKRLVAYHEAGHAMVGYLLPHTDPVHKISIIPRGRAGGYTL 453
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 425 (154.7 bits), Expect = 3.2e-38, P = 3.2e-38
Identities = 89/204 (43%), Positives = 127/204 (62%)
Query: 426 VKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVAN 485
V + DV G+D ++ E IV +K P +Y E G + G LL+G PG GKTL+A+A+A
Sbjct: 155 VTFADVAGIDEVKEELAE-IVEFLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAG 213
Query: 486 EAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE-GGW 544
EAG F I G + + +VG VR LF +A+ +PCI+F DE+DA+ +RG GG
Sbjct: 214 EAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQRGAGLGGG 273
Query: 545 VVER--LLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDER 602
ER LNQLL+E+DG + +G+ +I ATNRPD++D A+LRPGRF + + V P + R
Sbjct: 274 HDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDTPDINGR 333
Query: 603 GLILEALARKKPIDDSVDLHTIAQ 626
IL+ + KP+ D VDL +A+
Sbjct: 334 KEILKVHVKGKPLGDDVDLDVLAR 357
Score = 378 (138.1 bits), Expect = 2.3e-32, Sum P(2) = 2.3e-32
Identities = 96/224 (42%), Positives = 125/224 (55%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
F D+ G++ V EEL E++ L +P+ LG R G+LL+G PG GKT LA AIA E
Sbjct: 157 FADVAGIDEVKEELA-EIVEFLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAGEA 215
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR-ENLQREME 241
GVPF+ IS ++ V G +RDLF +A + AP IVFIDEIDA+ +R L +
Sbjct: 216 GVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQRGAGLGGGHD 275
Query: 242 RRIVT--QLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
R T QL+ MD + G +++I ATNRPD +DPAL RPGR
Sbjct: 276 EREQTLNQLLVEMDGFNS--NEG---------------IIIIAATNRPDILDPALLRPGR 318
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
FDR IV+ PD N R +IL V + + DL +AR TPGF
Sbjct: 319 FDRHIVVDTPDINGRKEILKVHVKGKPLGDDVDLDVLARRTPGF 362
Score = 39 (18.8 bits), Expect = 2.3e-32, Sum P(2) = 2.3e-32
Identities = 14/55 (25%), Positives = 23/55 (41%)
Query: 494 IKGPELLNKYVGESELAVRTLFSRARTCSPCIL-FFDEVDALTT-KRGKEGGWVV 546
I GPE +K + E E + +L D V ++ RG+ GG+ +
Sbjct: 399 IAGPEKKSKVISEREKRLVAYHEAGHAMVGYLLPHTDPVHKISIIPRGRAGGYTL 453
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 411 (149.7 bits), Expect = 3.5e-38, P = 3.5e-38
Identities = 83/204 (40%), Positives = 125/204 (61%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P++ + D+GGLD + E + + + Y++ G+D G LL+GPPGCGKT++AKAV
Sbjct: 147 PDISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAV 206
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
A+ A+FI + G E + KY+GE VR LF A+ SP I+F DE+DA+ TKR +
Sbjct: 207 AHHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEIDAIATKRFDAQT 266
Query: 542 GG-WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R+L +LL ++DG D+ + VI ATNR D +D A+LRPGR + + +PLP
Sbjct: 267 GADREVQRILLELLNQMDGFDETTNIKVIMATNRADTLDPALLRPGRLDRKIELPLPDRR 326
Query: 601 ERGLILEALARKKPIDDSVDLHTI 624
++ L+ + K + + VDL I
Sbjct: 327 QKRLVFTTITSKMNVGEDVDLEDI 350
Score = 360 (131.8 bits), Expect = 2.0e-32, P = 2.0e-32
Identities = 85/217 (39%), Positives = 122/217 (56%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG++ +E++ V +PL H QL + +G+ P G+LL+GPPGCGKT LA A+A+ T
Sbjct: 151 YSDIGGLDIQKQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAHHT 210
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F ++ +E V G +RDLF A + +PSI+FIDEIDAIA+KR + Q +R
Sbjct: 211 TASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEIDAIATKRFDAQTGADR 270
Query: 243 ---RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
RI+ +L+ MD G + VI ATNR D +DPAL RPGR
Sbjct: 271 EVQRILLELLNQMD--------GFDETTN---------IKVIMATNRADTLDPALLRPGR 313
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKI 336
DR+I L +PD + + + +T + V DL I
Sbjct: 314 LDRKIELPLPDRRQKRLVFTTITSKMNVGEDVDLEDI 350
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 391 (142.7 bits), Expect = 4.1e-38, Sum P(2) = 4.1e-38
Identities = 87/215 (40%), Positives = 122/215 (56%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+ + D+GG D + E + + Y++ G+D G LLYGPPG GKT++AKAV
Sbjct: 145 PSESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAV 204
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
A+ A FI + G E + KY+GE VR +F AR SP I+F DE+DA+ TKR +
Sbjct: 205 AHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDAQT 264
Query: 542 GG-WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R+L +LL ++DG D V VI ATNR D +D A+LRPGR + + PLP
Sbjct: 265 GADREVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRR 324
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
++ LI + + K + D VDL + LSG
Sbjct: 325 QKRLIFQVITSKMNLSDEVDLEDYVSRP--DKLSG 357
Score = 338 (124.0 bits), Expect = 5.0e-32, Sum P(2) = 5.0e-32
Identities = 79/211 (37%), Positives = 114/211 (54%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG + +E++ V +PL H L + +G+ P G+LLYGPPG GKT LA A+A+ T
Sbjct: 149 YSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHT 208
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F ++ +E V G +RD+F A +P+I+FIDEIDAIA+KR + Q +R
Sbjct: 209 SAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGADR 268
Query: 243 RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDR 302
+ LM +++ G V VI ATNR D +DPAL RPGR DR
Sbjct: 269 EVQRILMELLNQ-----MDGFDVSVN---------VKVIMATNRQDTLDPALLRPGRLDR 314
Query: 303 EIVLGVPDENARVQILSVLTRNLRVEGSFDL 333
+I +PD + I V+T + + DL
Sbjct: 315 KIEFPLPDRRQKRLIFQVITSKMNLSDEVDL 345
Score = 41 (19.5 bits), Expect = 4.1e-38, Sum P(2) = 4.1e-38
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 50 EFDLMKSMLRDSYSESKITRRKSEEKNIEFEVMPRKIDLVNAKSREVEMKKEESV 104
E DL + M ESK+ +E+ I++E K +L++A+ E+K+ SV
Sbjct: 22 EADLYQKM---KSLESKLDFFNIQEEYIKYEYKNLKRELLHAQE---EVKRIRSV 70
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 406 (148.0 bits), Expect = 1.3e-37, P = 1.3e-37
Identities = 83/201 (41%), Positives = 122/201 (60%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P++ + D+GGLD + E + + E Y++ G+D G L+YGPPGCGKT++AKAV
Sbjct: 156 PDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAV 215
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
A A+FI + G E + KY+GE VR +F A+ SP I+F DE+DA+ TKR +
Sbjct: 216 AANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQT 275
Query: 542 GG-WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R+L +LL ++DG D+ V VI ATNR D +D A+LRPGR + + PLP
Sbjct: 276 GADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRR 335
Query: 601 ERGLILEALARKKPIDDSVDL 621
++ L+ + + + D VDL
Sbjct: 336 QKRLVFSTVCSRMNLSDDVDL 356
Score = 347 (127.2 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 82/214 (38%), Positives = 117/214 (54%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG++ +E++ V +PL H +L Q +G+ P G+L+YGPPGCGKT LA A+A T
Sbjct: 160 YGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANT 219
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F ++ +E V G +RD+F A +PSI+FIDEIDAIA+KR + Q +R
Sbjct: 220 AASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGADR 279
Query: 243 ---RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
RI+ +L+ MD G V VI ATNR D +DPAL RPGR
Sbjct: 280 EVQRILLELLNQMD--------GFDQSTN---------VKVIMATNRQDTLDPALLRPGR 322
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDL 333
DR+I +PD + + S + + + DL
Sbjct: 323 LDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDL 356
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 404 (147.3 bits), Expect = 2.3e-37, P = 2.3e-37
Identities = 85/220 (38%), Positives = 130/220 (59%)
Query: 405 EEATKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLET 464
+ + M+QP + P+V + D+GG+D + E + + E Y++ G+D
Sbjct: 143 DSSISMLQPDEK-------PDVSYADIGGMDMQKQEIREAVELPLTHFELYKQIGIDPPR 195
Query: 465 GFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPC 524
G L+YGPPGCGKT++AKAVA+ A+FI + G E + KY+GE VR +F A+ +P
Sbjct: 196 GVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPA 255
Query: 525 ILFFDEVDALTTKR--GKEGG-WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRA 581
I+F DE+DA+ TKR + G V+R+L +LL ++DG D+ V VI ATNR D +D A
Sbjct: 256 IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPA 315
Query: 582 VLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDL 621
+LRPGR + + PLP ++ L+ + K + + VDL
Sbjct: 316 LLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEDVDL 355
Score = 355 (130.0 bits), Expect = 7.1e-32, P = 7.1e-32
Identities = 84/220 (38%), Positives = 123/220 (55%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GGM+ +E++ V +PL H +L + +G+ P G+L+YGPPGCGKT LA A+A+ T
Sbjct: 159 YADIGGMDMQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHT 218
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F ++ +E V G +RD+F A AP+I+FIDEIDAIA+KR + Q +R
Sbjct: 219 TASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADR 278
Query: 243 ---RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
RI+ +L+ MD + V VI ATNR D +DPAL RPGR
Sbjct: 279 EVQRILLELLNQMDGFDQTTN-----------------VKVIMATNRADTLDPALLRPGR 321
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVK-IAR 338
DR+I +PD + + S +T + + DL + +AR
Sbjct: 322 LDRKIEFPLPDRRQKRLVFSTITSKMNLSEDVDLEEFVAR 361
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 385 (140.6 bits), Expect = 4.4e-37, Sum P(2) = 4.4e-37
Identities = 87/215 (40%), Positives = 121/215 (56%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P + D+GGL+ E + + PE YE+ G+ G +LYGPPG GKTL+AKAV
Sbjct: 188 PLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAV 247
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
ANE A F+ + G EL+ KY+G+ VR +F A +P I+F DE+DA+ TKR
Sbjct: 248 ANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATS 307
Query: 542 GGW-VVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
GG ++R + +LL +LDG D R V VI ATNR D +D A++RPGR + + +P P
Sbjct: 308 GGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTK 367
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
+ I + K + VDL SK + LSG
Sbjct: 368 TKRRIFQIHTSKMTMSPDVDLEEFVMSK--DELSG 400
Score = 369 (135.0 bits), Expect = 3.1e-35, Sum P(2) = 3.1e-35
Identities = 84/217 (38%), Positives = 124/217 (57%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+ES ++E+K V +PL HP+L + +G++P G++LYGPPG GKT LA A+ANET
Sbjct: 192 YADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANET 251
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F ++ +E++ G + +R++F A APSIVFIDEIDA+ +KR ER
Sbjct: 252 SATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSGGER 311
Query: 243 RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDR 302
I ++ +++ G G V VI ATNR D++DPAL RPGR DR
Sbjct: 312 EIQRTMLELLNQLD-----GFDSR---------GDVKVIMATNRIDSLDPALIRPGRIDR 357
Query: 303 EIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARS 339
+I L PD + +I + T + + DL + S
Sbjct: 358 KIQLPNPDTKTKRRIFQIHTSKMTMSPDVDLEEFVMS 394
Score = 38 (18.4 bits), Expect = 4.4e-37, Sum P(2) = 4.4e-37
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 76 NIEFEVMPRKIDLVNAKSREVEMKKEESV 104
N + + +K D K ++ E KK ESV
Sbjct: 9 NNPYGFLGKKEDKDKGKDKDKEKKKLESV 37
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 385 (140.6 bits), Expect = 4.4e-37, Sum P(2) = 4.4e-37
Identities = 87/215 (40%), Positives = 121/215 (56%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P + D+GGL+ E + + PE YE+ G+ G +LYGPPG GKTL+AKAV
Sbjct: 188 PLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAV 247
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
ANE A F+ + G EL+ KY+G+ VR +F A +P I+F DE+DA+ TKR
Sbjct: 248 ANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATS 307
Query: 542 GGW-VVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
GG ++R + +LL +LDG D R V VI ATNR D +D A++RPGR + + +P P
Sbjct: 308 GGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTK 367
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
+ I + K + VDL SK + LSG
Sbjct: 368 TKRRIFQIHTSKMTMSPDVDLEEFVMSK--DELSG 400
Score = 369 (135.0 bits), Expect = 3.1e-35, Sum P(2) = 3.1e-35
Identities = 84/217 (38%), Positives = 124/217 (57%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+ES ++E+K V +PL HP+L + +G++P G++LYGPPG GKT LA A+ANET
Sbjct: 192 YADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANET 251
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F ++ +E++ G + +R++F A APSIVFIDEIDA+ +KR ER
Sbjct: 252 SATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSGGER 311
Query: 243 RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDR 302
I ++ +++ G G V VI ATNR D++DPAL RPGR DR
Sbjct: 312 EIQRTMLELLNQLD-----GFDSR---------GDVKVIMATNRIDSLDPALIRPGRIDR 357
Query: 303 EIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARS 339
+I L PD + +I + T + + DL + S
Sbjct: 358 KIQLPNPDTKTKRRIFQIHTSKMTMSPDVDLEEFVMS 394
Score = 38 (18.4 bits), Expect = 4.4e-37, Sum P(2) = 4.4e-37
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 76 NIEFEVMPRKIDLVNAKSREVEMKKEESV 104
N + + +K D K ++ E KK ESV
Sbjct: 9 NNPYGFLGKKEDKDKGKDKDKEKKKLESV 37
>UNIPROTKB|P37476 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
Uniprot:P37476
Length = 637
Score = 417 (151.9 bits), Expect = 5.0e-37, P = 5.0e-37
Identities = 89/203 (43%), Positives = 125/203 (61%)
Query: 426 VKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVAN 485
VK++DV G D + E +V +K P ++ E G + G LL GPPG GKTL+AKA A
Sbjct: 158 VKFKDVAGADEEKQELVE-VVEFLKDPRKFAELGARIPKGVLLVGPPGTGKTLLAKACAG 216
Query: 486 EAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE-GGW 544
EAG F I G + + +VG VR LF A+ +PC++F DE+DA+ +RG GG
Sbjct: 217 EAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDAVGRQRGAGLGGG 276
Query: 545 VVER--LLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDER 602
ER LNQLL+E+DG +G+ +I ATNR D++D A+LRPGRF + + V P R
Sbjct: 277 HDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQITVDRPDVIGR 336
Query: 603 GLILEALARKKPIDDSVDLHTIA 625
+L+ AR KP+D++V+L +IA
Sbjct: 337 EAVLKVHARNKPLDETVNLKSIA 359
Score = 347 (127.2 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 90/225 (40%), Positives = 121/225 (53%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
+F+D+ G + +EL +EV+ L P+ LG R G+LL GPPG GKT LA A A E
Sbjct: 159 KFKDVAGADEEKQEL-VEVVEFLKDPRKFAELGARIPKGVLLVGPPGTGKTLLAKACAGE 217
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR-ENLQREM 240
GVPF+ IS ++ V G +RDLF A + AP ++FIDEIDA+ +R L
Sbjct: 218 AGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDAVGRQRGAGLGGGH 277
Query: 241 ERRIVT--QLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPG 298
+ R T QL+ MD G +++I ATNR D +DPAL RPG
Sbjct: 278 DEREQTLNQLLVEMD----------------GFSANEG-IIIIAATNRADILDPALLRPG 320
Query: 299 RFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
RFDR+I + PD R +L V RN ++ + +L IA TPGF
Sbjct: 321 RFDRQITVDRPDVIGREAVLKVHARNKPLDETVNLKSIAMRTPGF 365
Score = 38 (18.4 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 457 EFGVDLETGFLLYGPPGCGKTLIAKAVANE 486
EFG+ + G L +G G+ + + NE
Sbjct: 513 EFGMSEKLGPLQFGQSQGGQVFLGRDFNNE 542
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 416 (151.5 bits), Expect = 5.9e-37, P = 5.9e-37
Identities = 92/216 (42%), Positives = 125/216 (57%)
Query: 414 SSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPG 473
S R A V ++DV G+D + E +V +K PE + G + G LL GPPG
Sbjct: 157 SKARFQMDAKTGVMFDDVAGIDEAKEELQE-VVTFLKQPERFTAVGAKIPKGVLLVGPPG 215
Query: 474 CGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDA 533
GKTL+AKA+A EAG F I G E + +VG VR LF +A+ +PC++F DE+DA
Sbjct: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDA 275
Query: 534 LTTKRGKE-GGWVVER--LLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGK 590
+ +RG GG ER LNQLL E+DG + G+ +I ATNRPDV+D A++RPGRF +
Sbjct: 276 VGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDR 335
Query: 591 LLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 626
+ V P R ILE AR K + V + +IA+
Sbjct: 336 QVMVDAPDYSGRKEILEVHARNKKLAPEVSIDSIAR 371
Score = 378 (138.1 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 93/227 (40%), Positives = 126/227 (55%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
F D+ G++ EEL+ EV+ L P+ +G + G+LL GPPG GKT LA AIA E
Sbjct: 171 FDDVAGIDEAKEELQ-EVVTFLKQPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEA 229
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE------NL 236
GVPF+ IS +E V G +RDLF KA AP ++FIDEIDA+ +R N
Sbjct: 230 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRGAGIGGGND 289
Query: 237 QREMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRR 296
+RE + + QL+T MD G +++I ATNRPD +D AL R
Sbjct: 290 ERE---QTLNQLLTEMD--------GFEGNTG---------IIIIAATNRPDVLDSALMR 329
Query: 297 PGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
PGRFDR++++ PD + R +IL V RN ++ + IAR TPGF
Sbjct: 330 PGRFDRQVMVDAPDYSGRKEILEVHARNKKLAPEVSIDSIARRTPGF 376
Score = 44 (20.5 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 14/53 (26%), Positives = 23/53 (43%)
Query: 403 DFEEATKMVQPSSRREGFSAIPNVKWEDVGGLDYL------RHEFDRYIVRRI 449
D ++ T+M + R G S + + E GG +L R E+ + RI
Sbjct: 511 DLQQVTEMARQMVTRFGMSNLGPISLESSGGEVFLGGGLMNRSEYSEEVATRI 563
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 381 (139.2 bits), Expect = 7.9e-37, Sum P(2) = 7.9e-37
Identities = 83/208 (39%), Positives = 122/208 (58%)
Query: 423 IPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKA 482
+P+ ++ +GGLD E I IK PE +E G+ G LLYGPPG GKTL+A+A
Sbjct: 155 VPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 214
Query: 483 VANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEG 542
VA+ FI + G EL+ KY+GE VR LF AR +P I+F DE+D++ + R + G
Sbjct: 215 VAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESG 274
Query: 543 GW----VVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPT 598
V+R + +LL +LDG + + V+ ATNR D++D+A+LRPGR + + P P
Sbjct: 275 SGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPN 334
Query: 599 PDERGLILEALARKKPIDDSVDLHTIAQ 626
+ R IL+ +RK + +DL IA+
Sbjct: 335 EESRFDILKIHSRKMNLMRGIDLKKIAE 362
Score = 326 (119.8 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 81/222 (36%), Positives = 122/222 (54%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVP 185
+GG++ ++E+K + +P+ HP+L + LG+ G+LLYGPPG GKT LA A+A+ T
Sbjct: 163 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 222
Query: 186 FYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE-----NLQREM 240
F ++S +E+V G +R+LF A APSI+F+DEID+I S R N E+
Sbjct: 223 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEV 282
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRF 300
+R ++ +L+ +D G + V+ ATNR D +D AL RPGR
Sbjct: 283 QRTML-ELLNQLD--------GFEASNK---------IKVLMATNRIDILDQALLRPGRI 324
Query: 301 DREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPG 342
DR+I P+E +R IL + +R + + DL KIA G
Sbjct: 325 DRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNG 366
Score = 40 (19.1 bits), Expect = 7.9e-37, Sum P(2) = 7.9e-37
Identities = 12/47 (25%), Positives = 22/47 (46%)
Query: 294 LRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARST 340
L+ PG + E+V + V++ + ++ S D+ KI ST
Sbjct: 78 LQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPST 124
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 399 (145.5 bits), Expect = 8.6e-37, P = 8.6e-37
Identities = 83/201 (41%), Positives = 122/201 (60%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+V + D+GG+D + E + + E Y++ G+D G L+YGPPGCGKT++AKAV
Sbjct: 159 PDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAV 218
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
A+ A FI + G E + KY+GE VR +F A+ +P I+F DE+DA+ TKR +
Sbjct: 219 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQT 278
Query: 542 GG-WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R+L +LL ++DG D+ V VI ATNR D +D A+LRPGR + + PLP
Sbjct: 279 GADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 338
Query: 601 ERGLILEALARKKPIDDSVDL 621
++ LI + K + + VDL
Sbjct: 339 QKRLIFSTITSKMNLSEEVDL 359
Score = 354 (129.7 bits), Expect = 9.2e-32, P = 9.2e-32
Identities = 84/214 (39%), Positives = 120/214 (56%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GGM+ +E++ V +PL H +L + +G+ P G+L+YGPPGCGKT LA A+A+ T
Sbjct: 163 YADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHT 222
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F ++ +E V G +RD+F A AP+I+FIDEIDAIA+KR + Q +R
Sbjct: 223 TAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADR 282
Query: 243 ---RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
RI+ +L+ MD + V V VI ATNR D +DPAL RPGR
Sbjct: 283 EVQRILLELLNQMDGFDQNVN-----------------VKVIMATNRADTLDPALLRPGR 325
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDL 333
DR+I +PD + I S +T + + DL
Sbjct: 326 LDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDL 359
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 381 (139.2 bits), Expect = 1.3e-36, Sum P(2) = 1.3e-36
Identities = 83/208 (39%), Positives = 122/208 (58%)
Query: 423 IPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKA 482
+P+ ++ +GGLD E I IK PE +E G+ G LLYGPPG GKTL+A+A
Sbjct: 155 VPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 214
Query: 483 VANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEG 542
VA+ FI + G EL+ KY+GE VR LF AR +P I+F DE+D++ + R + G
Sbjct: 215 VAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESG 274
Query: 543 GW----VVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPT 598
V+R + +LL +LDG + + V+ ATNR D++D+A+LRPGR + + P P
Sbjct: 275 SGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPN 334
Query: 599 PDERGLILEALARKKPIDDSVDLHTIAQ 626
+ R IL+ +RK + +DL IA+
Sbjct: 335 EESRFDILKIHSRKMNLMRGIDLKKIAE 362
Score = 326 (119.8 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 81/222 (36%), Positives = 122/222 (54%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVP 185
+GG++ ++E+K + +P+ HP+L + LG+ G+LLYGPPG GKT LA A+A+ T
Sbjct: 163 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 222
Query: 186 FYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE-----NLQREM 240
F ++S +E+V G +R+LF A APSI+F+DEID+I S R N E+
Sbjct: 223 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEV 282
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRF 300
+R ++ +L+ +D G + V+ ATNR D +D AL RPGR
Sbjct: 283 QRTML-ELLNQLD--------GFEASNK---------IKVLMATNRIDILDQALLRPGRI 324
Query: 301 DREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPG 342
DR+I P+E +R IL + +R + + DL KIA G
Sbjct: 325 DRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNG 366
Score = 38 (18.4 bits), Expect = 1.3e-36, Sum P(2) = 1.3e-36
Identities = 11/47 (23%), Positives = 22/47 (46%)
Query: 294 LRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARST 340
L+ PG + E+V + V++ + ++ S D+ K+ ST
Sbjct: 78 LQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKLTPST 124
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 412 (150.1 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 88/206 (42%), Positives = 126/206 (61%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P + + +V G+D + E +V +K E+++ G + G LL GPPG GKTL+AKA+
Sbjct: 154 PTITFANVAGVDEAKQEVGE-VVEFLKSREKFQALGARIPKGILLIGPPGTGKTLLAKAI 212
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE-G 542
A EAG F I G E + +VG VR LF +A+ +PCI+F DE+DA+ +RG G
Sbjct: 213 AGEAGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKKNAPCIIFIDEIDAVGRQRGAGLG 272
Query: 543 GWVVER--LLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G ER LNQ+L+E+DG D V VI ATNRPD++D A+LRPGRF + + + P
Sbjct: 273 GGHDEREQTLNQILVEMDGFDTDTSVIVIAATNRPDILDPALLRPGRFDRRVVLDKPDIT 332
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQ 626
R IL+ A+ KP+ D+V+L +A+
Sbjct: 333 GREAILKIHAKGKPLADTVNLENLAK 358
Score = 344 (126.2 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 91/224 (40%), Positives = 120/224 (53%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
F ++ G++ +E+ EV+ L + Q LG R GILL GPPG GKT LA AIA E
Sbjct: 158 FANVAGVDEAKQEVG-EVVEFLKSREKFQALGARIPKGILLIGPPGTGKTLLAKAIAGEA 216
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR-ENLQREME 241
GVPF+ IS +E V G +RDLF +A + AP I+FIDEIDA+ +R L +
Sbjct: 217 GVPFFSISGSEFVEMFVGVGASRVRDLFDQAKKNAPCIIFIDEIDAVGRQRGAGLGGGHD 276
Query: 242 RRIVT--QLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
R T Q++ MD G V+VI ATNRPD +DPAL RPGR
Sbjct: 277 EREQTLNQILVEMD--------GFDTDTS---------VIVIAATNRPDILDPALLRPGR 319
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
FDR +VL PD R IL + + + + +L +A+ T GF
Sbjct: 320 FDRRVVLDKPDITGREAILKIHAKGKPLADTVNLENLAKQTVGF 363
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 397 (144.8 bits), Expect = 1.4e-36, P = 1.4e-36
Identities = 89/215 (41%), Positives = 124/215 (57%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P + D+GGL+ E I + PE YEE G+ G +LYG PG GKTL+AKAV
Sbjct: 179 PTESYSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAV 238
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
AN+ A F+ + G EL+ KY+G+ VR LF A C+P I+F DE+DA+ TKR +
Sbjct: 239 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDAVGTKRYDSQS 298
Query: 542 GGW-VVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
GG ++R + +LL +LDG D R V VI ATNR + +D A++RPGR + + PLP
Sbjct: 299 GGEREIQRTMLELLNQLDGFDARTDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDIK 358
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
+ I E K + + V+L SK ++LSG
Sbjct: 359 TKRKIFEIHTAKMNLSEDVNLEEFVMSK--DDLSG 391
Score = 347 (127.2 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 78/217 (35%), Positives = 123/217 (56%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+E+ ++E+K + +PL HP+L + +G++P G++LYG PG GKT LA A+AN+T
Sbjct: 183 YSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQT 242
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F ++ +E++ G + +R+LF A APSIVFIDEIDA+ +KR + Q ER
Sbjct: 243 SATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDAVGTKRYDSQSGGER 302
Query: 243 RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDR 302
I ++ +++ G V VI ATNR + +DPAL RPGR DR
Sbjct: 303 EIQRTMLELLNQLD-----GFDARTD---------VKVIMATNRIETLDPALIRPGRIDR 348
Query: 303 EIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARS 339
+I +PD + +I + T + + +L + S
Sbjct: 349 KIEFPLPDIKTKRKIFEIHTAKMNLSEDVNLEEFVMS 385
Score = 38 (18.4 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 396 RLTITMTDFEEATKMV 411
R+ +T TDF++A + V
Sbjct: 410 RMRVTHTDFKKAKEKV 425
>TIGR_CMR|CJE_1085 [details] [associations]
symbol:CJE_1085 "cell division protein FtsH, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0051301 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0465 GO:GO:0017111 HOGENOM:HOG000217276 KO:K01417
RefSeq:YP_179078.1 ProteinModelPortal:Q5HUF7 SMR:Q5HUF7
STRING:Q5HUF7 GeneID:3231594 KEGG:cjr:CJE1085 PATRIC:20043979
OMA:HRSDERE ProtClustDB:CLSK2395802
BioCyc:CJEJ195099:GJC0-1111-MONOMER Uniprot:Q5HUF7
Length = 538
Score = 396 (144.5 bits), Expect = 1.9e-36, P = 1.9e-36
Identities = 85/205 (41%), Positives = 129/205 (62%)
Query: 423 IPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKA 482
I N+ + DV G+D ++ E +V ++ P++Y+EFGV + G L+ GPPG GKTLIAKA
Sbjct: 146 ISNITFNDVAGVDEVKMELSE-LVDFLQNPKKYKEFGVKMPKGVLMVGPPGVGKTLIAKA 204
Query: 483 VANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEG 542
VA EAG F + G + YVG VR LFS+A+ +P I+F DE+DA+ RG+
Sbjct: 205 VAGEAGVPFFYQSGSSFVEIYVGMGAKRVRELFSKAKMMAPSIVFIDEIDAVGKARGEMS 264
Query: 543 GWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDER 602
+ LNQLL ++DG + GV VI ATN+ ++MD A+LR GRF + +++ LP +R
Sbjct: 265 NVERDSTLNQLLTQMDGFEDNSGVIVIAATNKIELMDPALLRSGRFDRRIFLSLPDFKDR 324
Query: 603 GLILEALARKKPIDDSVDLHTIAQS 627
ILE + K +++++L+ IA++
Sbjct: 325 LKILEIYMKDK--NNNINLNKIAKA 347
Score = 248 (92.4 bits), Expect = 3.5e-27, Sum P(2) = 3.5e-27
Identities = 55/131 (41%), Positives = 77/131 (58%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
F D+ G++ V EL E++ L +P+ + GV+ G+L+ GPPG GKT +A A+A E
Sbjct: 151 FNDVAGVDEVKMELS-ELVDFLQNPKKYKEFGVKMPKGVLMVGPPGVGKTLIAKAVAGEA 209
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
GVPF+ S + V G + +R+LFSKA APSIVFIDEIDA+ R +
Sbjct: 210 GVPFFYQSGSSFVEIYVGMGAKRVRELFSKAKMMAPSIVFIDEIDAVGKARGEMSNVERD 269
Query: 243 RIVTQLMTCMD 253
+ QL+T MD
Sbjct: 270 STLNQLLTQMD 280
Score = 133 (51.9 bits), Expect = 3.5e-27, Sum P(2) = 3.5e-27
Identities = 29/66 (43%), Positives = 44/66 (66%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
V+VI ATN+ + +DPAL R GRFDR I L +PD R++IL + ++ + +L KIA
Sbjct: 288 VIVIAATNKIELMDPALLRSGRFDRRIFLSLPDFKDRLKILEIYMKDKN--NNINLNKIA 345
Query: 338 RSTPGF 343
+++ GF
Sbjct: 346 KASVGF 351
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 396 (144.5 bits), Expect = 1.9e-36, P = 1.9e-36
Identities = 91/216 (42%), Positives = 126/216 (58%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+V + DVGGLD + E + + + Y++ G+D G LLYGPPG GKT++ KAV
Sbjct: 161 PDVTYADVGGLDMQKQEIREAVELPLTHFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAV 220
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
AN A+FI + G E + KY+GE VR +F AR SP I+F DE+DA+ TKR +
Sbjct: 221 ANSTTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDAQT 280
Query: 542 GG-WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVP-LPTP 599
G V+R+L +LL ++DG ++ V VI ATNR D +D A+LRPGR + + P L
Sbjct: 281 GADREVQRILLELLNQMDGFEQTSNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDR 340
Query: 600 DERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
ER LI +A K + VDL ++ E LSG
Sbjct: 341 RERRLIFSTIASKMSLSPEVDLDSLIVRN--EPLSG 374
Score = 329 (120.9 bits), Expect = 5.1e-29, P = 5.1e-29
Identities = 80/221 (36%), Positives = 117/221 (52%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG++ +E++ V +PL H L + +G+ P G+LLYGPPG GKT L A+AN T
Sbjct: 165 YADVGGLDMQKQEIREAVELPLTHFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVANST 224
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F +++ +E V G +RD+F A +P+I+FIDEIDAIA+KR + Q +R
Sbjct: 225 TASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDAQTGADR 284
Query: 243 RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDR 302
+ L+ +++ Q V VI ATNR D +DPAL RPGR DR
Sbjct: 285 EVQRILLELLNQMDGFEQTSN--------------VKVIMATNRADTLDPALLRPGRLDR 330
Query: 303 EIVL-GVPDENARVQILSVLTRNLRVEGSFDLVK-IARSTP 341
+I + D R I S + + + DL I R+ P
Sbjct: 331 KIEFPSLRDRRERRLIFSTIASKMSLSPEVDLDSLIVRNEP 371
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 395 (144.1 bits), Expect = 2.4e-36, P = 2.4e-36
Identities = 87/215 (40%), Positives = 125/215 (58%)
Query: 423 IPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKA 482
+P+ +E VGGLD E I +K PE +E G+ G LLYGPPG GKTL+A+A
Sbjct: 173 VPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARA 232
Query: 483 VANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GK 540
VA+ FI + G EL+ KY+GE VR LF AR +P I+F DE+D++ ++R G+
Sbjct: 233 VAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGE 292
Query: 541 EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R + +LL +LDG + + + VI TNR D++D A+LRPGR + + P P +
Sbjct: 293 HGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVE 352
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
R IL+ +RK + +D+ IA N SG
Sbjct: 353 ARMEILKIHSRKMNLMRGIDMLKIATDM--NNCSG 385
Score = 326 (119.8 bits), Expect = 2.3e-30, Sum P(2) = 2.3e-30
Identities = 78/217 (35%), Positives = 124/217 (57%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++ +GG++ ++E+K + +P+ HP++ + LG+ G+LLYGPPG GKT LA A+A+ T
Sbjct: 178 YEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHT 237
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR-ENLQREME 241
F ++S +E+V G +R+LF A APSI+F+DEID+I S+R E + E
Sbjct: 238 DCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHGDSE 297
Query: 242 -RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRF 300
+R + +L+ +D G + VI TNR D +D AL RPGR
Sbjct: 298 VQRTMMELLNQLD--------GFESTQN---------IKVIMCTNRIDILDEALLRPGRI 340
Query: 301 DREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
DR+I P+ AR++IL + +R + + D++KIA
Sbjct: 341 DRKIEFPNPNVEARMEILKIHSRKMNLMRGIDMLKIA 377
Score = 38 (18.4 bits), Expect = 2.3e-30, Sum P(2) = 2.3e-30
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 396 RLTITMTDFEEATKMVQPSSRREGFS 421
R+ +T DFE A V + F+
Sbjct: 404 RVHVTQEDFEMAVAKVMKQDAEKNFT 429
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 395 (144.1 bits), Expect = 2.4e-36, P = 2.4e-36
Identities = 87/215 (40%), Positives = 125/215 (58%)
Query: 423 IPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKA 482
+P+ +E VGGLD E I +K PE +E G+ G LLYGPPG GKTL+A+A
Sbjct: 173 VPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARA 232
Query: 483 VANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GK 540
VA+ FI + G EL+ KY+GE VR LF AR +P I+F DE+D++ ++R G+
Sbjct: 233 VAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGE 292
Query: 541 EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R + +LL +LDG + + + VI TNR D++D A+LRPGR + + P P +
Sbjct: 293 HGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVE 352
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
R IL+ +RK + +D+ IA N SG
Sbjct: 353 ARMEILKIHSRKMNLMRGIDMLKIATDM--NNCSG 385
Score = 326 (119.8 bits), Expect = 2.3e-30, Sum P(2) = 2.3e-30
Identities = 78/217 (35%), Positives = 124/217 (57%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++ +GG++ ++E+K + +P+ HP++ + LG+ G+LLYGPPG GKT LA A+A+ T
Sbjct: 178 YEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHT 237
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR-ENLQREME 241
F ++S +E+V G +R+LF A APSI+F+DEID+I S+R E + E
Sbjct: 238 DCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHGDSE 297
Query: 242 -RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRF 300
+R + +L+ +D G + VI TNR D +D AL RPGR
Sbjct: 298 VQRTMMELLNQLD--------GFESTQN---------IKVIMCTNRIDILDEALLRPGRI 340
Query: 301 DREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
DR+I P+ AR++IL + +R + + D++KIA
Sbjct: 341 DRKIEFPNPNVEARMEILKIHSRKMNLMRGIDMLKIA 377
Score = 38 (18.4 bits), Expect = 2.3e-30, Sum P(2) = 2.3e-30
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 396 RLTITMTDFEEATKMVQPSSRREGFS 421
R+ +T DFE A V + F+
Sbjct: 404 RVHVTQEDFEMAVAKVMKQDAEKNFT 429
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 395 (144.1 bits), Expect = 2.4e-36, P = 2.4e-36
Identities = 84/201 (41%), Positives = 119/201 (59%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+V + D+GG D + E + + E Y++ G+D G LLYGPPG GKT++AKAV
Sbjct: 150 PDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAV 209
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
AN A FI + G E + KY+GE VR +F A+ +P I+F DEVDA+ T R +
Sbjct: 210 ANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 269
Query: 542 GG-WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R+L +LL ++DG D+ V VI ATNR D +D A+LRPGR + + PLP
Sbjct: 270 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 329
Query: 601 ERGLILEALARKKPIDDSVDL 621
++ L+ + K + D VDL
Sbjct: 330 QKRLVFQVCTSKMNLSDEVDL 350
Score = 341 (125.1 bits), Expect = 2.5e-30, P = 2.5e-30
Identities = 81/214 (37%), Positives = 116/214 (54%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG + +E++ V +PL H +L + +G+ P G+LLYGPPG GKT LA A+AN T
Sbjct: 154 YNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHT 213
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F ++ +E V G +RD+F A AP+I+FIDE+DAIA+ R + Q +R
Sbjct: 214 TAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADR 273
Query: 243 ---RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
RI+ +L+ MD + V V VI ATNR D +DPAL RPGR
Sbjct: 274 EVQRILMELLNQMDGFDQTVN-----------------VKVIMATNRADTLDPALLRPGR 316
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDL 333
DR+I +PD + + V T + + DL
Sbjct: 317 LDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDL 350
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 395 (144.1 bits), Expect = 2.4e-36, P = 2.4e-36
Identities = 86/208 (41%), Positives = 122/208 (58%)
Query: 423 IPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKA 482
IP+ +E VGGL+ E I +K PE +E G+ G LLYGPPG GKTL+A+A
Sbjct: 139 IPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARA 198
Query: 483 VANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---- 538
VA+ FI + G EL+ KY+GE VR LF AR +P I+F DE+D++ + R
Sbjct: 199 VAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSS 258
Query: 539 GKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPT 598
G G V+R + +LL +LDG + K + VI ATNR D++D A+LRPGR + + P P+
Sbjct: 259 GGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPS 318
Query: 599 PDERGLILEALARKKPIDDSVDLHTIAQ 626
+ R IL +R + +DL +IA+
Sbjct: 319 AEARAEILRIHSRSMNLTRGIDLKSIAE 346
Score = 335 (123.0 bits), Expect = 1.1e-29, P = 1.1e-29
Identities = 82/220 (37%), Positives = 121/220 (55%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++ +GG+E ++E+K + +P+ HP+L + LG+ GILLYGPPG GKT LA A+A+ T
Sbjct: 144 YEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHT 203
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F ++S +E+V G +R+LF A APSI+F+DEID+I S R +
Sbjct: 204 DCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGD 263
Query: 243 RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDR 302
V + M ++ ++L G + VI ATNR D +DPAL RPGR DR
Sbjct: 264 SEVQRTM--LELLNQL--DGFEATKN---------IKVIMATNRIDILDPALLRPGRIDR 310
Query: 303 EIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPG 342
+I P AR +IL + +R++ + DL IA G
Sbjct: 311 KIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNG 350
>UNIPROTKB|F1N9N5 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
OMA:LYRFVTT EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00683486 Ensembl:ENSGALT00000016639 ArrayExpress:F1N9N5
Uniprot:F1N9N5
Length = 635
Score = 411 (149.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 100/279 (35%), Positives = 149/279 (53%)
Query: 425 NVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVA 484
+VK++DV G + + E + V +K P++YE+ G + G +L GPPG GKTL+AKA A
Sbjct: 148 DVKFKDVAGCEEAKLEIMEF-VNFLKNPKQYEDLGAKIPKGAILTGPPGTGKTLLAKATA 206
Query: 485 NEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE--G 542
EA FI + G E L +VG VR LF+ AR +PCILF DE+DA+ KRG+ G
Sbjct: 207 GEANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFG 266
Query: 543 GWVV-ERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDE 601
G E LNQLL+E+DG + V ++ TNRPD++D A++RPGRF + +Y+ P
Sbjct: 267 GQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIYIGPPDIKG 326
Query: 602 RGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSS 661
R I + R +D +D +A+ L+ LI+++ S
Sbjct: 327 RASIFKVHLRPLKLDTVLDKDNLARK-----LASLTPGFSGADIANVCNEAALIAARHLS 381
Query: 662 DVTPFTIKLTHFEQALSKISPSVSE----LQIQRYKTLS 696
D I HFEQA+ ++ + + LQ + KT++
Sbjct: 382 DA----INQKHFEQAIERVIGGLEKKTQVLQPEEKKTVA 416
Score = 332 (121.9 bits), Expect = 4.4e-27, P = 4.4e-27
Identities = 89/230 (38%), Positives = 120/230 (52%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
+F+D+ G E E+ ME + L +P+ + LG + G +L GPPG GKT LA A A E
Sbjct: 150 KFKDVAGCEEAKLEI-MEFVNFLKNPKQYEDLGAKIPKGAILTGPPGTGKTLLAKATAGE 208
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE--NL--Q 237
VPF ++ +E + G +RDLF+ A + AP I+FIDEIDA+ KR N Q
Sbjct: 209 ANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQ 268
Query: 238 REMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRP 297
E E + QL+ MD G V+++ TNRPD +DPAL RP
Sbjct: 269 SEQENTL-NQLLVEMD--------GFNTTTN---------VVILAGTNRPDILDPALMRP 310
Query: 298 GRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARS----TPGF 343
GRFDR+I +G PD R I V R L+++ D +AR TPGF
Sbjct: 311 GRFDRQIYIGPPDIKGRASIFKVHLRPLKLDTVLDKDNLARKLASLTPGF 360
>SGD|S000006228 [details] [associations]
symbol:YME1 "Catalytic subunit of the mitochondrial inner
membrane i-AAA protease" species:4932 "Saccharomyces cerevisiae"
[GO:0006457 "protein folding" evidence=IMP] [GO:0005743
"mitochondrial inner membrane" evidence=IEA;IDA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IGI;IMP]
[GO:0006515 "misfolded or incompletely synthesized protein
catabolic process" evidence=IMP] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0031942 "i-AAA complex"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
SGD:S000006228 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
GO:GO:0004222 EMBL:Z71255 EMBL:BK006949 GO:GO:0006515
eggNOG:COG0465 TIGRFAMs:TIGR01241 EMBL:Z49274 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942
GeneTree:ENSGT00550000074836 KO:K08955 OrthoDB:EOG4FR40W
EMBL:L14616 EMBL:X81067 EMBL:D16332 PIR:S54498 RefSeq:NP_015349.1
ProteinModelPortal:P32795 SMR:P32795 IntAct:P32795 STRING:P32795
PaxDb:P32795 PeptideAtlas:P32795 EnsemblFungi:YPR024W GeneID:856135
KEGG:sce:YPR024W CYGD:YPR024w OMA:SEFDEVY NextBio:981236
Genevestigator:P32795 GermOnline:YPR024W Uniprot:P32795
Length = 747
Score = 413 (150.4 bits), Expect = 3.9e-36, P = 3.9e-36
Identities = 93/211 (44%), Positives = 128/211 (60%)
Query: 425 NVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVA 484
NVK++DV G D R E + IV +K P +YE G L G LL GPPG GKTL+A+A A
Sbjct: 277 NVKFDDVCGCDEARAELEE-IVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARATA 335
Query: 485 NEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGW 544
EAG +F + G E YVG +R LF++AR+ +P I+F DE+DA+ KR +
Sbjct: 336 GEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQARSRAPAIIFIDELDAIGGKRNPKDQA 395
Query: 545 VVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGL 604
++ LNQLL+ELDG + G+ +IGATN P+ +D+A+ RPGRF K++ V LP R
Sbjct: 396 YAKQTLNQLLVELDGFSQTSGIIIIGATNFPEALDKALTRPGRFDKVVNVDLPDVRGRAD 455
Query: 605 ILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
IL+ +K + D+VD IA+ LSG
Sbjct: 456 ILKHHMKKITLADNVDPTIIARGT--PGLSG 484
Score = 226 (84.6 bits), Expect = 4.5e-25, Sum P(2) = 4.5e-25
Identities = 52/132 (39%), Positives = 76/132 (57%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
+F D+ G + EL+ E++ L P + LG + G+LL GPPG GKT LA A A E
Sbjct: 279 KFDDVCGCDEARAELE-EIVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARATAGE 337
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREME 241
GV F+ +S +E G + IRDLF++A AP+I+FIDE+DAI KR +
Sbjct: 338 AGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQARSRAPAIIFIDELDAIGGKRNPKDQAYA 397
Query: 242 RRIVTQLMTCMD 253
++ + QL+ +D
Sbjct: 398 KQTLNQLLVELD 409
Score = 142 (55.0 bits), Expect = 4.5e-25, Sum P(2) = 4.5e-25
Identities = 28/65 (43%), Positives = 41/65 (63%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
+++IGATN P+A+D AL RPGRFD+ + + +PD R IL + + + + D IA
Sbjct: 417 IIIIGATNFPEALDKALTRPGRFDKVVNVDLPDVRGRADILKHHMKKITLADNVDPTIIA 476
Query: 338 RSTPG 342
R TPG
Sbjct: 477 RGTPG 481
>WB|WBGene00004978 [details] [associations]
symbol:spg-7 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0008270 GO:GO:0006508
GO:GO:0000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0030968
EMBL:FO081580 HSSP:Q9LCZ4 RefSeq:NP_491165.2
ProteinModelPortal:Q9N3T5 SMR:Q9N3T5 STRING:Q9N3T5 MEROPS:M41.A10
PaxDb:Q9N3T5 EnsemblMetazoa:Y47G6A.10 GeneID:171915
KEGG:cel:CELE_Y47G6A.10 UCSC:Y47G6A.10 CTD:171915
WormBase:Y47G6A.10 InParanoid:Q9N3T5 NextBio:873225 Uniprot:Q9N3T5
Length = 782
Score = 412 (150.1 bits), Expect = 6.1e-36, P = 6.1e-36
Identities = 104/280 (37%), Positives = 147/280 (52%)
Query: 426 VKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVAN 485
VK+ DV G + + E + V +K P++Y++ G + G +L GPPG GKTL+AKA A
Sbjct: 290 VKFADVAGCEEAKIEIMEF-VNFLKNPQQYKDLGAKIPKGAILTGPPGTGKTLLAKATAG 348
Query: 486 EAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGW- 544
EA FI + G E L +VG VR +FS AR SPCILF DE+DA+ KRG +GG
Sbjct: 349 EANVPFITVSGSEFLEMFVGVGPARVRDMFSMARKNSPCILFIDEIDAVGRKRGGKGGMG 408
Query: 545 ---VVERLLNQLLIELDG-ADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
E LNQLL+E+DG V VI ATNR D++D A+LRPGRF + +YVP+P
Sbjct: 409 GHSEQENTLNQLLVEMDGFTTDESSVIVIAATNRVDILDSALLRPGRFDRQIYVPVPDIK 468
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSS 660
R I P+ S+D T+ K + G LI+++ +
Sbjct: 469 GRASIFRV--HLGPLRTSLD-KTVLSRKLAAHTPGFSGADISNVCNEAA----LIAARDA 521
Query: 661 SDVTPFTIKLTHFEQALSKISPSVSE----LQIQRYKTLS 696
+ I HFEQA+ ++ + + LQ + KT++
Sbjct: 522 NH----EISNKHFEQAIERVVAGMEKKTQVLQKEEKKTVA 557
Score = 307 (113.1 bits), Expect = 4.7e-24, P = 4.7e-24
Identities = 88/229 (38%), Positives = 114/229 (49%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
+F D+ G E E+ ME + L +PQ + LG + G +L GPPG GKT LA A A E
Sbjct: 291 KFADVAGCEEAKIEI-MEFVNFLKNPQQYKDLGAKIPKGAILTGPPGTGKTLLAKATAGE 349
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENL----- 236
VPF +S +E + G +RD+FS A + +P I+FIDEIDA+ KR
Sbjct: 350 ANVPFITVSGSEFLEMFVGVGPARVRDMFSMARKNSPCILFIDEIDAVGRKRGGKGGMGG 409
Query: 237 QREMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRR 296
E E + QL+ MD G V+VI ATNR D +D AL R
Sbjct: 410 HSEQENTL-NQLLVEMD--------GFTTDESS--------VIVIAATNRVDILDSALLR 452
Query: 297 PGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLV--KIARSTPGF 343
PGRFDR+I + VPD R I V LR ++ K+A TPGF
Sbjct: 453 PGRFDRQIYVPVPDIKGRASIFRVHLGPLRTSLDKTVLSRKLAAHTPGF 501
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 391 (142.7 bits), Expect = 6.9e-36, P = 6.9e-36
Identities = 87/215 (40%), Positives = 123/215 (57%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P + D+GGLD E + + PE YEE G+ G +LYGPPG GKTL+AKAV
Sbjct: 179 PQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAV 238
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
AN+ A F+ + G EL+ KY+G+ VR LF A +P I+F DE+DA+ TKR
Sbjct: 239 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNS 298
Query: 542 GGW-VVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
GG ++R + +LL +LDG D R V VI ATNR + +D A++RPGR + + PLP
Sbjct: 299 GGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK 358
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
+ I + + + D V L + +K ++LSG
Sbjct: 359 TKKRIFQIHTSRMTLADDVTLDELIMAK--DDLSG 391
Score = 353 (129.3 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 78/203 (38%), Positives = 119/203 (58%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+++ ++E+K V +PL HP+ + +G++P G++LYGPPG GKT LA A+AN+T
Sbjct: 183 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 242
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F ++ +E++ G + +R+LF A APSIVFIDEIDAI +KR + ER
Sbjct: 243 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 302
Query: 243 RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDR 302
I ++ +++ G G V VI ATNR + +DPAL RPGR DR
Sbjct: 303 EIQRTMLELLNQLD-----GFDSR---------GDVKVIMATNRIETLDPALIRPGRIDR 348
Query: 303 EIVLGVPDENARVQILSVLTRNL 325
+I +PDE + +I + T +
Sbjct: 349 KIEFPLPDEKTKKRIFQIHTSRM 371
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 391 (142.7 bits), Expect = 6.9e-36, P = 6.9e-36
Identities = 87/215 (40%), Positives = 123/215 (57%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P + D+GGLD E + + PE YEE G+ G +LYGPPG GKTL+AKAV
Sbjct: 178 PQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAV 237
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
AN+ A F+ + G EL+ KY+G+ VR LF A +P I+F DE+DA+ TKR
Sbjct: 238 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNS 297
Query: 542 GGW-VVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
GG ++R + +LL +LDG D R V VI ATNR + +D A++RPGR + + PLP
Sbjct: 298 GGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK 357
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
+ I + + + D V L + +K ++LSG
Sbjct: 358 TKKRIFQIHTSRMTLADDVTLDELIMAK--DDLSG 390
Score = 353 (129.3 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 78/203 (38%), Positives = 119/203 (58%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+++ ++E+K V +PL HP+ + +G++P G++LYGPPG GKT LA A+AN+T
Sbjct: 182 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 241
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F ++ +E++ G + +R+LF A APSIVFIDEIDAI +KR + ER
Sbjct: 242 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 301
Query: 243 RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDR 302
I ++ +++ G G V VI ATNR + +DPAL RPGR DR
Sbjct: 302 EIQRTMLELLNQLD-----GFDSR---------GDVKVIMATNRIETLDPALIRPGRIDR 347
Query: 303 EIVLGVPDENARVQILSVLTRNL 325
+I +PDE + +I + T +
Sbjct: 348 KIEFPLPDEKTKKRIFQIHTSRM 370
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 391 (142.7 bits), Expect = 6.9e-36, P = 6.9e-36
Identities = 87/215 (40%), Positives = 123/215 (57%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P + D+GGLD E + + PE YEE G+ G +LYGPPG GKTL+AKAV
Sbjct: 180 PQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAV 239
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
AN+ A F+ + G EL+ KY+G+ VR LF A +P I+F DE+DA+ TKR
Sbjct: 240 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNS 299
Query: 542 GGW-VVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
GG ++R + +LL +LDG D R V VI ATNR + +D A++RPGR + + PLP
Sbjct: 300 GGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK 359
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
+ I + + + D V L + +K ++LSG
Sbjct: 360 TKKRIFQIHTSRMTLADDVTLDDLIMAK--DDLSG 392
Score = 353 (129.3 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 78/203 (38%), Positives = 119/203 (58%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+++ ++E+K V +PL HP+ + +G++P G++LYGPPG GKT LA A+AN+T
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F ++ +E++ G + +R+LF A APSIVFIDEIDAI +KR + ER
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 243 RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDR 302
I ++ +++ G G V VI ATNR + +DPAL RPGR DR
Sbjct: 304 EIQRTMLELLNQLD-----GFDSR---------GDVKVIMATNRIETLDPALIRPGRIDR 349
Query: 303 EIVLGVPDENARVQILSVLTRNL 325
+I +PDE + +I + T +
Sbjct: 350 KIEFPLPDEKTKKRIFQIHTSRM 372
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 391 (142.7 bits), Expect = 6.9e-36, P = 6.9e-36
Identities = 87/215 (40%), Positives = 123/215 (57%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P + D+GGLD E + + PE YEE G+ G +LYGPPG GKTL+AKAV
Sbjct: 180 PQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAV 239
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
AN+ A F+ + G EL+ KY+G+ VR LF A +P I+F DE+DA+ TKR
Sbjct: 240 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNS 299
Query: 542 GGW-VVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
GG ++R + +LL +LDG D R V VI ATNR + +D A++RPGR + + PLP
Sbjct: 300 GGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK 359
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
+ I + + + D V L + +K ++LSG
Sbjct: 360 TKKRIFQIHTSRMTLADDVTLDDLIMAK--DDLSG 392
Score = 353 (129.3 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 78/203 (38%), Positives = 119/203 (58%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+++ ++E+K V +PL HP+ + +G++P G++LYGPPG GKT LA A+AN+T
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F ++ +E++ G + +R+LF A APSIVFIDEIDAI +KR + ER
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 243 RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDR 302
I ++ +++ G G V VI ATNR + +DPAL RPGR DR
Sbjct: 304 EIQRTMLELLNQLD-----GFDSR---------GDVKVIMATNRIETLDPALIRPGRIDR 349
Query: 303 EIVLGVPDENARVQILSVLTRNL 325
+I +PDE + +I + T +
Sbjct: 350 KIEFPLPDEKTKKRIFQIHTSRM 372
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 391 (142.7 bits), Expect = 6.9e-36, P = 6.9e-36
Identities = 87/215 (40%), Positives = 123/215 (57%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P + D+GGLD E + + PE YEE G+ G +LYGPPG GKTL+AKAV
Sbjct: 107 PQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAV 166
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
AN+ A F+ + G EL+ KY+G+ VR LF A +P I+F DE+DA+ TKR
Sbjct: 167 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNS 226
Query: 542 GGW-VVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
GG ++R + +LL +LDG D R V VI ATNR + +D A++RPGR + + PLP
Sbjct: 227 GGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK 286
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
+ I + + + D V L + +K ++LSG
Sbjct: 287 TKKRIFQIHTSRMTLADDVTLDDLIMAK--DDLSG 319
Score = 353 (129.3 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 78/203 (38%), Positives = 119/203 (58%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+++ ++E+K V +PL HP+ + +G++P G++LYGPPG GKT LA A+AN+T
Sbjct: 111 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 170
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F ++ +E++ G + +R+LF A APSIVFIDEIDAI +KR + ER
Sbjct: 171 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 230
Query: 243 RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDR 302
I ++ +++ G G V VI ATNR + +DPAL RPGR DR
Sbjct: 231 EIQRTMLELLNQLD-----GFDSR---------GDVKVIMATNRIETLDPALIRPGRIDR 276
Query: 303 EIVLGVPDENARVQILSVLTRNL 325
+I +PDE + +I + T +
Sbjct: 277 KIEFPLPDEKTKKRIFQIHTSRM 299
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 391 (142.7 bits), Expect = 6.9e-36, P = 6.9e-36
Identities = 87/215 (40%), Positives = 123/215 (57%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P + D+GGLD E + + PE YEE G+ G +LYGPPG GKTL+AKAV
Sbjct: 180 PQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAV 239
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
AN+ A F+ + G EL+ KY+G+ VR LF A +P I+F DE+DA+ TKR
Sbjct: 240 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNS 299
Query: 542 GGW-VVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
GG ++R + +LL +LDG D R V VI ATNR + +D A++RPGR + + PLP
Sbjct: 300 GGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK 359
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
+ I + + + D V L + +K ++LSG
Sbjct: 360 TKKRIFQIHTSRMTLADDVTLDDLIMAK--DDLSG 392
Score = 353 (129.3 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 78/203 (38%), Positives = 119/203 (58%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+++ ++E+K V +PL HP+ + +G++P G++LYGPPG GKT LA A+AN+T
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F ++ +E++ G + +R+LF A APSIVFIDEIDAI +KR + ER
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 243 RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDR 302
I ++ +++ G G V VI ATNR + +DPAL RPGR DR
Sbjct: 304 EIQRTMLELLNQLD-----GFDSR---------GDVKVIMATNRIETLDPALIRPGRIDR 349
Query: 303 EIVLGVPDENARVQILSVLTRNL 325
+I +PDE + +I + T +
Sbjct: 350 KIEFPLPDEKTKKRIFQIHTSRM 372
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 391 (142.7 bits), Expect = 6.9e-36, P = 6.9e-36
Identities = 87/215 (40%), Positives = 123/215 (57%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P + D+GGLD E + + PE YEE G+ G +LYGPPG GKTL+AKAV
Sbjct: 180 PQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAV 239
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
AN+ A F+ + G EL+ KY+G+ VR LF A +P I+F DE+DA+ TKR
Sbjct: 240 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNS 299
Query: 542 GGW-VVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
GG ++R + +LL +LDG D R V VI ATNR + +D A++RPGR + + PLP
Sbjct: 300 GGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK 359
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
+ I + + + D V L + +K ++LSG
Sbjct: 360 TKKRIFQIHTSRMTLADDVTLDDLIMAK--DDLSG 392
Score = 353 (129.3 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 78/203 (38%), Positives = 119/203 (58%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+++ ++E+K V +PL HP+ + +G++P G++LYGPPG GKT LA A+AN+T
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F ++ +E++ G + +R+LF A APSIVFIDEIDAI +KR + ER
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 243 RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDR 302
I ++ +++ G G V VI ATNR + +DPAL RPGR DR
Sbjct: 304 EIQRTMLELLNQLD-----GFDSR---------GDVKVIMATNRIETLDPALIRPGRIDR 349
Query: 303 EIVLGVPDENARVQILSVLTRNL 325
+I +PDE + +I + T +
Sbjct: 350 KIEFPLPDEKTKKRIFQIHTSRM 372
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 391 (142.7 bits), Expect = 6.9e-36, P = 6.9e-36
Identities = 87/215 (40%), Positives = 123/215 (57%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P + D+GGLD E + + PE YEE G+ G +LYGPPG GKTL+AKAV
Sbjct: 180 PQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAV 239
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
AN+ A F+ + G EL+ KY+G+ VR LF A +P I+F DE+DA+ TKR
Sbjct: 240 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNS 299
Query: 542 GGW-VVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
GG ++R + +LL +LDG D R V VI ATNR + +D A++RPGR + + PLP
Sbjct: 300 GGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK 359
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
+ I + + + D V L + +K ++LSG
Sbjct: 360 TKKRIFQIHTSRMTLADDVTLDDLIMAK--DDLSG 392
Score = 353 (129.3 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 78/203 (38%), Positives = 119/203 (58%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+++ ++E+K V +PL HP+ + +G++P G++LYGPPG GKT LA A+AN+T
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F ++ +E++ G + +R+LF A APSIVFIDEIDAI +KR + ER
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 243 RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDR 302
I ++ +++ G G V VI ATNR + +DPAL RPGR DR
Sbjct: 304 EIQRTMLELLNQLD-----GFDSR---------GDVKVIMATNRIETLDPALIRPGRIDR 349
Query: 303 EIVLGVPDENARVQILSVLTRNL 325
+I +PDE + +I + T +
Sbjct: 350 KIEFPLPDEKTKKRIFQIHTSRM 372
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 391 (142.7 bits), Expect = 6.9e-36, P = 6.9e-36
Identities = 87/215 (40%), Positives = 123/215 (57%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P + D+GGLD E + + PE YEE G+ G +LYGPPG GKTL+AKAV
Sbjct: 180 PQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAV 239
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
AN+ A F+ + G EL+ KY+G+ VR LF A +P I+F DE+DA+ TKR
Sbjct: 240 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNS 299
Query: 542 GGW-VVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
GG ++R + +LL +LDG D R V VI ATNR + +D A++RPGR + + PLP
Sbjct: 300 GGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK 359
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
+ I + + + D V L + +K ++LSG
Sbjct: 360 TKKRIFQIHTSRMTLADDVTLDDLIMAK--DDLSG 392
Score = 353 (129.3 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 78/203 (38%), Positives = 119/203 (58%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+++ ++E+K V +PL HP+ + +G++P G++LYGPPG GKT LA A+AN+T
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F ++ +E++ G + +R+LF A APSIVFIDEIDAI +KR + ER
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 243 RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDR 302
I ++ +++ G G V VI ATNR + +DPAL RPGR DR
Sbjct: 304 EIQRTMLELLNQLD-----GFDSR---------GDVKVIMATNRIETLDPALIRPGRIDR 349
Query: 303 EIVLGVPDENARVQILSVLTRNL 325
+I +PDE + +I + T +
Sbjct: 350 KIEFPLPDEKTKKRIFQIHTSRM 372
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 391 (142.7 bits), Expect = 6.9e-36, P = 6.9e-36
Identities = 88/205 (42%), Positives = 120/205 (58%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+V + DVGGLD + E + + + Y + G+D G LLYGPPG GKT++ KAV
Sbjct: 150 PDVTYADVGGLDMQKQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAV 209
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
AN A+FI I G E + KY+GE VR +F AR SP I+F DE+DA+ TKR +
Sbjct: 210 ANSTTASFIRINGSEFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIATKRFDAQT 269
Query: 542 GG-WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVP-LPTP 599
G V+R+L +LL ++DG D+ V VI ATNR D +D A+LRPGR + + P L
Sbjct: 270 GADREVQRILLELLNQMDGFDQTSTVKVIMATNRADTLDPALLRPGRLDRKIEFPSLKDR 329
Query: 600 DERGLILEALARKKPIDDSVDLHTI 624
ER LI +A K + DL ++
Sbjct: 330 RERRLIFSTIASKMSLAPEADLDSL 354
Score = 323 (118.8 bits), Expect = 2.3e-28, P = 2.3e-28
Identities = 81/221 (36%), Positives = 115/221 (52%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG++ +E+K V +PL L +G+ P G+LLYGPPG GKT L A+AN T
Sbjct: 154 YADVGGLDMQKQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVANST 213
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F +I+ +E V G +RD+F A +P+I+FIDEIDAIA+KR + Q +R
Sbjct: 214 TASFIRINGSEFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGADR 273
Query: 243 RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDR 302
+ L+ +++ Q V VI ATNR D +DPAL RPGR DR
Sbjct: 274 EVQRILLELLNQMDGFDQTST--------------VKVIMATNRADTLDPALLRPGRLDR 319
Query: 303 EIVL-GVPDENARVQILSVLTRNLRVEGSFDLVK-IARSTP 341
+I + D R I S + + + DL I R+ P
Sbjct: 320 KIEFPSLKDRRERRLIFSTIASKMSLAPEADLDSLIIRNDP 360
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 391 (142.7 bits), Expect = 6.9e-36, P = 6.9e-36
Identities = 88/205 (42%), Positives = 120/205 (58%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+V + DVGGLD + E + + + Y + G+D G LLYGPPG GKT++ KAV
Sbjct: 150 PDVTYADVGGLDMQKQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAV 209
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
AN A+FI I G E + KY+GE VR +F AR SP I+F DE+DA+ TKR +
Sbjct: 210 ANSTTASFIRINGSEFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIATKRFDAQT 269
Query: 542 GG-WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVP-LPTP 599
G V+R+L +LL ++DG D+ V VI ATNR D +D A+LRPGR + + P L
Sbjct: 270 GADREVQRILLELLNQMDGFDQTSTVKVIMATNRADTLDPALLRPGRLDRKIEFPSLKDR 329
Query: 600 DERGLILEALARKKPIDDSVDLHTI 624
ER LI +A K + DL ++
Sbjct: 330 RERRLIFSTIASKMSLAPEADLDSL 354
Score = 323 (118.8 bits), Expect = 2.3e-28, P = 2.3e-28
Identities = 81/221 (36%), Positives = 115/221 (52%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG++ +E+K V +PL L +G+ P G+LLYGPPG GKT L A+AN T
Sbjct: 154 YADVGGLDMQKQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVANST 213
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F +I+ +E V G +RD+F A +P+I+FIDEIDAIA+KR + Q +R
Sbjct: 214 TASFIRINGSEFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGADR 273
Query: 243 RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDR 302
+ L+ +++ Q V VI ATNR D +DPAL RPGR DR
Sbjct: 274 EVQRILLELLNQMDGFDQTST--------------VKVIMATNRADTLDPALLRPGRLDR 319
Query: 303 EIVL-GVPDENARVQILSVLTRNLRVEGSFDLVK-IARSTP 341
+I + D R I S + + + DL I R+ P
Sbjct: 320 KIEFPSLKDRRERRLIFSTIASKMSLAPEADLDSLIIRNDP 360
>UNIPROTKB|Q9Y4W6 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9606 "Homo
sapiens" [GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0021675 "nerve
development" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0051082 "unfolded protein binding" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0008219 DrugBank:DB00171 GO:GO:0007528 GO:GO:0051082
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 eggNOG:COG0465
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 GO:GO:0021675 GO:GO:0060013 EMBL:Y18314 EMBL:BC065016
IPI:IPI00001091 RefSeq:NP_006787.2 UniGene:Hs.726355 PDB:2LNA
PDBsum:2LNA ProteinModelPortal:Q9Y4W6 SMR:Q9Y4W6 IntAct:Q9Y4W6
MINT:MINT-1161944 STRING:Q9Y4W6 MEROPS:M41.007 PhosphoSite:Q9Y4W6
DMDM:126302516 PaxDb:Q9Y4W6 PeptideAtlas:Q9Y4W6 PRIDE:Q9Y4W6
Ensembl:ENST00000269143 GeneID:10939 KEGG:hsa:10939 UCSC:uc002kqz.2
GeneCards:GC18M012328 H-InvDB:HIX0027367 HGNC:HGNC:315
HPA:HPA004479 HPA:HPA004480 MIM:604581 MIM:610246 MIM:614487
neXtProt:NX_Q9Y4W6 Orphanet:101109 PharmGKB:PA24612
InParanoid:Q9Y4W6 PhylomeDB:Q9Y4W6 GenomeRNAi:10939 NextBio:41551
ArrayExpress:Q9Y4W6 Bgee:Q9Y4W6 CleanEx:HS_AFG3L2
Genevestigator:Q9Y4W6 GermOnline:ENSG00000141385 Uniprot:Q9Y4W6
Length = 797
Score = 411 (149.7 bits), Expect = 8.4e-36, P = 8.4e-36
Identities = 99/279 (35%), Positives = 149/279 (53%)
Query: 425 NVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVA 484
+VK++DV G + + E + V +K P++Y++ G + G +L GPPG GKTL+AKA A
Sbjct: 304 DVKFKDVAGCEEAKLEIMEF-VNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATA 362
Query: 485 NEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE--G 542
EA FI + G E L +VG VR LF+ AR +PCILF DE+DA+ KRG+ G
Sbjct: 363 GEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFG 422
Query: 543 GWVV-ERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDE 601
G E LNQLL+E+DG + V ++ TNRPD++D A+LRPGRF + +++ P
Sbjct: 423 GQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKG 482
Query: 602 RGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSS 661
R I + R +D T+ + K L+ LI+++ S
Sbjct: 483 RASIFKVHLRPLKLDS-----TLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLS 537
Query: 662 DVTPFTIKLTHFEQALSKISPSVSE----LQIQRYKTLS 696
D +I HFEQA+ ++ + + LQ + KT++
Sbjct: 538 D----SINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVA 572
Score = 343 (125.8 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 91/230 (39%), Positives = 122/230 (53%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
+F+D+ G E E+ ME + L +P+ Q LG + G +L GPPG GKT LA A A E
Sbjct: 306 KFKDVAGCEEAKLEI-MEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGE 364
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE--NL--Q 237
VPF +S +E + G +RDLF+ A + AP I+FIDEIDA+ KR N Q
Sbjct: 365 ANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQ 424
Query: 238 REMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRP 297
E E + QL+ MD G V+++ TNRPD +DPAL RP
Sbjct: 425 SEQENTL-NQLLVEMD--------GFNTTTN---------VVILAGTNRPDILDPALLRP 466
Query: 298 GRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARS----TPGF 343
GRFDR+I +G PD R I V R L+++ + + K+AR TPGF
Sbjct: 467 GRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGF 516
>UNIPROTKB|E1BZ74 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0016265 "death" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0042407 "cristae formation" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0008270 GO:GO:0006508
GO:GO:0040014 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 GO:GO:0016265
GO:GO:0060013 EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00603273 Ensembl:ENSGALT00000022474 ArrayExpress:E1BZ74
Uniprot:E1BZ74
Length = 805
Score = 411 (149.7 bits), Expect = 8.7e-36, P = 8.7e-36
Identities = 100/279 (35%), Positives = 149/279 (53%)
Query: 425 NVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVA 484
+VK++DV G + + E + V +K P++YE+ G + G +L GPPG GKTL+AKA A
Sbjct: 304 DVKFKDVAGCEEAKLEIMEF-VNFLKNPKQYEDLGAKIPKGAILTGPPGTGKTLLAKATA 362
Query: 485 NEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE--G 542
EA FI + G E L +VG VR LF+ AR +PCILF DE+DA+ KRG+ G
Sbjct: 363 GEANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFG 422
Query: 543 GWVV-ERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDE 601
G E LNQLL+E+DG + V ++ TNRPD++D A++RPGRF + +Y+ P
Sbjct: 423 GQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIYIGPPDIKG 482
Query: 602 RGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSS 661
R I + R +D +D +A+ L+ LI+++ S
Sbjct: 483 RASIFKVHLRPLKLDTVLDKDNLARK-----LASLTPGFSGADIANVCNEAALIAARHLS 537
Query: 662 DVTPFTIKLTHFEQALSKISPSVSE----LQIQRYKTLS 696
D I HFEQA+ ++ + + LQ + KT++
Sbjct: 538 DA----INQKHFEQAIERVIGGLEKKTQVLQPEEKKTVA 572
Score = 332 (121.9 bits), Expect = 8.5e-27, P = 8.5e-27
Identities = 89/230 (38%), Positives = 120/230 (52%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
+F+D+ G E E+ ME + L +P+ + LG + G +L GPPG GKT LA A A E
Sbjct: 306 KFKDVAGCEEAKLEI-MEFVNFLKNPKQYEDLGAKIPKGAILTGPPGTGKTLLAKATAGE 364
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE--NL--Q 237
VPF ++ +E + G +RDLF+ A + AP I+FIDEIDA+ KR N Q
Sbjct: 365 ANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQ 424
Query: 238 REMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRP 297
E E + QL+ MD G V+++ TNRPD +DPAL RP
Sbjct: 425 SEQENTL-NQLLVEMD--------GFNTTTN---------VVILAGTNRPDILDPALMRP 466
Query: 298 GRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARS----TPGF 343
GRFDR+I +G PD R I V R L+++ D +AR TPGF
Sbjct: 467 GRFDRQIYIGPPDIKGRASIFKVHLRPLKLDTVLDKDNLARKLASLTPGF 516
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 390 (142.3 bits), Expect = 9.0e-36, P = 9.0e-36
Identities = 87/215 (40%), Positives = 122/215 (56%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P + D+GGLD E + + PE YEE G+ G +LYGPPG GKTL+AKAV
Sbjct: 180 PQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAV 239
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
AN+ A F+ + G EL+ KY+G+ VR LF A P I+F DE+DA+ TKR
Sbjct: 240 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNS 299
Query: 542 GGW-VVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
GG ++R + +LL +LDG D R V VI ATNR + +D A++RPGR + + PLP
Sbjct: 300 GGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK 359
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
+ I + + + D V L + +K ++LSG
Sbjct: 360 TKKRIFQIHTSRMTLADDVTLDELIMAK--DDLSG 392
Score = 349 (127.9 bits), Expect = 3.2e-31, P = 3.2e-31
Identities = 77/203 (37%), Positives = 118/203 (58%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+++ ++E+K V +PL HP+ + +G++P G++LYGPPG GKT LA A+AN+T
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F ++ +E++ G + +R+LF A PSIVFIDEIDAI +KR + ER
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 243 RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDR 302
I ++ +++ G G V VI ATNR + +DPAL RPGR DR
Sbjct: 304 EIQRTMLELLNQLD-----GFDSR---------GDVKVIMATNRIETLDPALIRPGRIDR 349
Query: 303 EIVLGVPDENARVQILSVLTRNL 325
+I +PDE + +I + T +
Sbjct: 350 KIEFPLPDEKTKKRIFQIHTSRM 372
>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
symbol:psmc4 "proteasome (prosome, macropain) 26S
subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
Uniprot:Q7SXX0
Length = 418
Score = 390 (142.3 bits), Expect = 9.0e-36, P = 9.0e-36
Identities = 81/201 (40%), Positives = 121/201 (60%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+V + D+GG+D + E + + E Y++ G+D G L+YGPPGCGKT++AKAV
Sbjct: 160 PDVLYSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAV 219
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
A+ A FI + G E + KY+GE VR +F A+ +P I+F DE+DA+ TKR +
Sbjct: 220 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQT 279
Query: 542 GG-WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R+L +LL ++DG D+ V VI ATNR D +D A+L PGR + + PLP
Sbjct: 280 GADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLCPGRLDRKIEFPLPDRR 339
Query: 601 ERGLILEALARKKPIDDSVDL 621
++ L+ + K + + VDL
Sbjct: 340 QKRLVFSTITSKMNLSEEVDL 360
Score = 346 (126.9 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 82/214 (38%), Positives = 119/214 (55%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GGM+ +E++ V +PL H +L + +G+ P G+L+YGPPGCGKT LA A+A+ T
Sbjct: 164 YSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHT 223
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F ++ +E V G +RD+F A AP+I+FIDEIDAIA+KR + Q +R
Sbjct: 224 TAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADR 283
Query: 243 ---RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
RI+ +L+ MD + V V VI ATNR D +DPAL PGR
Sbjct: 284 EVQRILLELLNQMDGFDQNVN-----------------VKVIMATNRADTLDPALLCPGR 326
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDL 333
DR+I +PD + + S +T + + DL
Sbjct: 327 LDRKIEFPLPDRRQKRLVFSTITSKMNLSEEVDL 360
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 408 (148.7 bits), Expect = 1.0e-35, Sum P(2) = 1.0e-35
Identities = 93/211 (44%), Positives = 124/211 (58%)
Query: 420 FSAIPN--VKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKT 477
F PN V ++DV G+D + +F +V +K PE + G + G LL GPPG GKT
Sbjct: 216 FQMEPNTGVTFDDVAGVDEAKQDFME-VVEFLKKPERFTAVGAKIPKGVLLIGPPGTGKT 274
Query: 478 LIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTK 537
L+AKA+A EAG F I G E + +VG VR LF +A+ +PCI+F DE+DA+ +
Sbjct: 275 LLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQ 334
Query: 538 RGKE-GGWVVER--LLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYV 594
RG GG ER LNQLL E+DG + GV V+ ATNR D++D A+LRPGRF + + V
Sbjct: 335 RGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSV 394
Query: 595 PLPTPDERGLILEALARKKPIDDSVDLHTIA 625
+P R IL+ A K D+ V L IA
Sbjct: 395 DVPDVKGRTDILKVHAGNKKFDNDVSLEIIA 425
Score = 352 (129.0 bits), Expect = 3.3e-29, P = 3.3e-29
Identities = 92/227 (40%), Positives = 120/227 (52%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
F D+ G++ ++ MEV+ L P+ +G + G+LL GPPG GKT LA AIA E
Sbjct: 226 FDDVAGVDEAKQDF-MEVVEFLKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGEA 284
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE------NL 236
GVPF+ IS +E V G +RDLF KA AP IVF+DEIDA+ +R N
Sbjct: 285 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGND 344
Query: 237 QREMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRR 296
+RE + + QL+T MD G V+V+ ATNR D +D AL R
Sbjct: 345 ERE---QTLNQLLTEMD--------GFEGNTG---------VIVVAATNRADILDSALLR 384
Query: 297 PGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
PGRFDR++ + VPD R IL V N + + L IA TPGF
Sbjct: 385 PGRFDRQVSVDVPDVKGRTDILKVHAGNKKFDNDVSLEIIAMRTPGF 431
Score = 39 (18.8 bits), Expect = 1.0e-35, Sum P(2) = 1.0e-35
Identities = 19/60 (31%), Positives = 26/60 (43%)
Query: 131 SVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVPFYKIS 190
SV+ K+ V+ + Q G R ILL G G G A A+E GV ++S
Sbjct: 36 SVIRTSKVNVVKASLDGKKKQE-GRRDFLKILL-GNAGVGLVASGKANADEQGVSSSRMS 93
>UNIPROTKB|I3LLQ8 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0006508 GO:GO:0040014 GO:GO:0004222 GO:GO:0042552
GO:GO:0007409 GO:GO:0030163 GeneTree:ENSGT00530000063070
GO:GO:0017111 GO:GO:0042407 GO:GO:0008053 GO:GO:0034982
TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675
GO:GO:0060013 EMBL:FP565334 Ensembl:ENSSSCT00000025900
Uniprot:I3LLQ8
Length = 597
Score = 404 (147.3 bits), Expect = 1.1e-35, P = 1.1e-35
Identities = 99/280 (35%), Positives = 150/280 (53%)
Query: 425 NVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDL-ETGFLLYGPPGCGKTLIAKAV 483
+VK++DV G + + E + V +K P++Y++ G + + G +L GPPG GKTL+AKA
Sbjct: 95 DVKFKDVAGCEEAKLEIMEF-VNFLKNPKQYQDLGAKIPKKGAILTGPPGTGKTLLAKAT 153
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE-- 541
A EA FI + G E L +VG VR LF+ AR +PCILF DE+DA+ KRG+
Sbjct: 154 AGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNF 213
Query: 542 GGWVV-ERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
GG E LNQLL+E+DG + V ++ TNRPD++D A+LRPGRF + +++ P
Sbjct: 214 GGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIK 273
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSS 660
R I + R +D T+ + K L+ LI+++
Sbjct: 274 GRASIFKVHLRPLKLDS-----TLEKEKLARKLASLTPGFSGADVANVCNEAALIAARHL 328
Query: 661 SDVTPFTIKLTHFEQALSKISPSVSE----LQIQRYKTLS 696
SD +I HFEQA+ ++ + + LQ + KT++
Sbjct: 329 SD----SINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVA 364
Score = 346 (126.9 bits), Expect = 8.8e-29, P = 8.8e-29
Identities = 92/231 (39%), Positives = 123/231 (53%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVR-PMAGILLYGPPGCGKTKLAHAIAN 180
+F+D+ G E E+ ME + L +P+ Q LG + P G +L GPPG GKT LA A A
Sbjct: 97 KFKDVAGCEEAKLEI-MEFVNFLKNPKQYQDLGAKIPKKGAILTGPPGTGKTLLAKATAG 155
Query: 181 ETGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE--NL-- 236
E VPF +S +E + G +RDLF+ A + AP I+FIDEIDA+ KR N
Sbjct: 156 EANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGG 215
Query: 237 QREMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRR 296
Q E E + QL+ MD G V+++ TNRPD +DPAL R
Sbjct: 216 QSEQENTL-NQLLVEMD--------GFNTTTN---------VVILAGTNRPDILDPALLR 257
Query: 297 PGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARS----TPGF 343
PGRFDR+I +G PD R I V R L+++ + + K+AR TPGF
Sbjct: 258 PGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGF 308
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 389 (142.0 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 89/228 (39%), Positives = 123/228 (53%)
Query: 411 VQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYG 470
+ PS P+V + DVGG + + PE + + G+D G +LYG
Sbjct: 161 IDPSVTMMQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYG 220
Query: 471 PPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDE 530
PPG GKTL A+AVAN A FI + G EL+ KYVGE VR LF ART CI+FFDE
Sbjct: 221 PPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDE 280
Query: 531 VDALTTKR---GKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGR 587
+DA+ R G G V+R + +L+ +LDG D R + V+ ATNRP+ +D A++RPGR
Sbjct: 281 IDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGR 340
Query: 588 FGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
+ + LP + R IL A+ ID + IA + C + +G
Sbjct: 341 IDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIA--RLCPSQTG 386
Score = 302 (111.4 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 77/222 (34%), Positives = 114/222 (51%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG + +E L+ V +PL P+ LG+ P GI+LYGPPG GKT A A+AN T
Sbjct: 178 YGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANRT 237
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR--ENLQREM 240
F ++ +E+V G +R+LF A I+F DEIDAI R + +
Sbjct: 238 DATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAGGDN 297
Query: 241 E-RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
E +R + +L+T +D P G + V+ ATNRP+ +D AL RPGR
Sbjct: 298 EVQRTMLELITQLDG----FDPR-------------GNIKVLFATNRPNTLDEALMRPGR 340
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTP 341
DR++ G+PD R IL + +++ ++ IAR P
Sbjct: 341 IDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARLCP 382
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 388 (141.6 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 84/206 (40%), Positives = 123/206 (59%)
Query: 423 IPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKA 482
+P+ +E +GGLD E I +K PE +E G+ G LLYGPPG GKTL+A+A
Sbjct: 138 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARA 197
Query: 483 VANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTK-RGKE 541
VA+ FI + G EL+ K++GE VR LF AR +P I+F DE+D++ ++ G
Sbjct: 198 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSRLEGGS 257
Query: 542 GG-WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
GG V+R + +LL +LDG + K + VI ATNR D++D A+LRPGR + + P P +
Sbjct: 258 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 317
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQ 626
R IL+ +RK + ++L IA+
Sbjct: 318 ARLDILKIHSRKMNLTRGINLRKIAE 343
Score = 330 (121.2 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 81/222 (36%), Positives = 124/222 (55%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++ +GG++ ++E+K + +P+ HP+ + LG+ G+LLYGPPG GKT LA A+A+ T
Sbjct: 143 YEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 202
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQR-EME 241
F ++S +E+V G +R+LF A APSI+F+DEID+I S+ E + E
Sbjct: 203 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSRLEGGSGGDSE 262
Query: 242 -RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRF 300
+R + +L+ +D G + VI ATNR D +D AL RPGR
Sbjct: 263 VQRTMLELLNQLD--------GFEATKN---------IKVIMATNRIDILDSALLRPGRI 305
Query: 301 DREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPG 342
DR+I P+E AR+ IL + +R + + +L KIA PG
Sbjct: 306 DRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPG 347
Score = 38 (18.4 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 396 RLTITMTDFEEAT-KMVQPSSRR 417
R+ +T DFE A K++Q S +
Sbjct: 369 RVHVTQEDFEMAVAKVMQKDSEK 391
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 388 (141.6 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 85/204 (41%), Positives = 119/204 (58%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+V + DVGGLD + E + + + Y + G+D G LLYGPPG GKT++ KAV
Sbjct: 129 PDVSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAV 188
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
AN ANFI + G E + KY+GE VR +F AR +P I+F DE+DA+ TKR +
Sbjct: 189 ANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQT 248
Query: 542 GG-WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVP-LPTP 599
G V+R+L +LL ++DG D+ V VI ATNR D +D A+LRPGR + + P
Sbjct: 249 GADREVQRILIELLTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDR 308
Query: 600 DERGLILEALARKKPIDDSVDLHT 623
+R L+ + + K + VDL T
Sbjct: 309 RQRRLVFQTITAKMLLSPEVDLDT 332
Score = 317 (116.6 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 81/215 (37%), Positives = 114/215 (53%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG++ +E++ V +PL L + +G+ P G+LLYGPPG GKT L A+AN T
Sbjct: 133 YADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANST 192
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F ++ +E V G +RD+F A AP+I+FIDEIDAIA+KR + Q +R
Sbjct: 193 AANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTGADR 252
Query: 243 ---RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
RI+ +L+T MD + G V VI ATNR D +DPAL RPGR
Sbjct: 253 EVQRILIELLTQMDGFDQ----GAN-------------VKVIMATNRADTLDPALLRPGR 295
Query: 300 FDREIVL-GVPDENARVQILSVLTRNLRVEGSFDL 333
DR+I D R + +T + + DL
Sbjct: 296 LDRKIEFPSYRDRRQRRLVFQTITAKMLLSPEVDL 330
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 388 (141.6 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 89/228 (39%), Positives = 123/228 (53%)
Query: 411 VQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYG 470
+ PS P+V + DVGG + + + PE + + G+D G LLYG
Sbjct: 168 IDPSVTMMTVEEKPDVTYSDVGGCKEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYG 227
Query: 471 PPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDE 530
PPG GKTL A+AVAN A FI + G EL+ KYVGE VR LF ART CI+FFDE
Sbjct: 228 PPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDE 287
Query: 531 VDALTTKR---GKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGR 587
VDA+ R G G V+R + +L+ +LDG D R + V+ ATNRP+ +D A+LRPGR
Sbjct: 288 VDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGR 347
Query: 588 FGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
+ + LP + R I ++ ++ + I S+ C N +G
Sbjct: 348 IDRKVEFSLPDLEGRANIFRIHSKTMSVEKDIRWELI--SRLCPNATG 393
Score = 303 (111.7 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 77/222 (34%), Positives = 114/222 (51%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG + +E+L+ V +PL P+ LG+ P GILLYGPPG GKT A A+AN T
Sbjct: 185 YSDVGGCKEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKTLCARAVANRT 244
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR--ENLQREM 240
F ++ +E+V G +R+LF A I+F DE+DAI R + +
Sbjct: 245 DATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEVDAIGGARFDDGAGGDN 304
Query: 241 E-RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
E +R + +L+T +D P G + V+ ATNRP+ +DPAL RPGR
Sbjct: 305 EVQRTMLELITQLDG----FDPR-------------GNIKVMFATNRPNTLDPALLRPGR 347
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTP 341
DR++ +PD R I + ++ + VE I+R P
Sbjct: 348 IDRKVEFSLPDLEGRANIFRIHSKTMSVEKDIRWELISRLCP 389
>UNIPROTKB|Q2KJI7 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9913 "Bos
taurus" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0046872 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 MEROPS:M41.016
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:BC105322 IPI:IPI00686580 RefSeq:NP_001039676.1 UniGene:Bt.1657
HSSP:Q9WZ49 ProteinModelPortal:Q2KJI7 SMR:Q2KJI7 STRING:Q2KJI7
PRIDE:Q2KJI7 Ensembl:ENSBTAT00000031029 GeneID:515757
KEGG:bta:515757 CTD:10939 InParanoid:Q2KJI7 OMA:LYRFVTT
NextBio:20871990 GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
Uniprot:Q2KJI7
Length = 805
Score = 409 (149.0 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 98/279 (35%), Positives = 149/279 (53%)
Query: 425 NVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVA 484
+VK++DV G + + E + V +K P++Y++ G + G +L GPPG GKTL+AKA A
Sbjct: 305 DVKFKDVAGCEEAKLEIMEF-VNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATA 363
Query: 485 NEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE--G 542
EA FI + G E L +VG VR LF+ AR +PCILF DE+DA+ KRG+ G
Sbjct: 364 GEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFG 423
Query: 543 GWVV-ERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDE 601
G E LNQLL+E+DG + V ++ TNRPD++D A++RPGRF + +++ P
Sbjct: 424 GQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFIGPPDIKG 483
Query: 602 RGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSS 661
R I + R +D T+ + K L+ LI+++ S
Sbjct: 484 RASIFKVHLRPLKLDS-----TLEKEKLARKLASLTPGFSGADVANVCNEAALIAARHLS 538
Query: 662 DVTPFTIKLTHFEQALSKISPSVSE----LQIQRYKTLS 696
D +I HFEQA+ ++ + + LQ + KT++
Sbjct: 539 D----SINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVA 573
Score = 345 (126.5 bits), Expect = 3.0e-28, P = 3.0e-28
Identities = 91/230 (39%), Positives = 122/230 (53%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
+F+D+ G E E+ ME + L +P+ Q LG + G +L GPPG GKT LA A A E
Sbjct: 307 KFKDVAGCEEAKLEI-MEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGE 365
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE--NL--Q 237
VPF +S +E + G +RDLF+ A + AP I+FIDEIDA+ KR N Q
Sbjct: 366 ANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQ 425
Query: 238 REMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRP 297
E E + QL+ MD G V+++ TNRPD +DPAL RP
Sbjct: 426 SEQENTL-NQLLVEMD--------GFNTTTN---------VVILAGTNRPDILDPALMRP 467
Query: 298 GRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARS----TPGF 343
GRFDR+I +G PD R I V R L+++ + + K+AR TPGF
Sbjct: 468 GRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGF 517
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 387 (141.3 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 90/216 (41%), Positives = 126/216 (58%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+V + DVGGLD + E + + + YE+ G+D G LLYGPPG GKT++ KAV
Sbjct: 167 PDVTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAV 226
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
AN A FI + G E ++KY+GE VR +F AR +P I+F DEVD++ TKR +
Sbjct: 227 ANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQT 286
Query: 542 GG-WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVP-LPTP 599
G V+R+L +LL ++DG D+ V VI ATNR D +D A+LRPGR + + P L
Sbjct: 287 GSDREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDR 346
Query: 600 DERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
ER LI +A K + DL ++ ++LSG
Sbjct: 347 RERRLIFGTIASKMSLAPEADLDSLIIRN--DSLSG 380
Score = 319 (117.4 bits), Expect = 6.3e-28, P = 6.3e-28
Identities = 80/215 (37%), Positives = 114/215 (53%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG++ +E++ V +PL L + +G+ P G+LLYGPPG GKT L A+AN T
Sbjct: 171 YADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANST 230
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F +++ +E V G +RD+F A APSI+FIDE+D+IA+KR + Q +R
Sbjct: 231 KAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTGSDR 290
Query: 243 ---RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
RI+ +L+T MD G V VI ATNR D +DPAL RPGR
Sbjct: 291 EVQRILIELLTQMD--------GFDQSTN---------VKVIMATNRADTLDPALLRPGR 333
Query: 300 FDREIVL-GVPDENARVQILSVLTRNLRVEGSFDL 333
DR+I + D R I + + + DL
Sbjct: 334 LDRKIEFPSLRDRRERRLIFGTIASKMSLAPEADL 368
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 387 (141.3 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 87/215 (40%), Positives = 119/215 (55%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+V + DVGG + + + PE + G+D G LLYGPPG GKTL A+AV
Sbjct: 180 PDVTYGDVGGCKEQIEKLREVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKTLCARAV 239
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---GK 540
AN A FI + G EL+ KYVGE VR LF ART CI+FFDE+DA+ R G
Sbjct: 240 ANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGA 299
Query: 541 EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R + +L+ +LDG D R + V+ ATNRP +D A++RPGR + + LP +
Sbjct: 300 GGDNEVQRTMLELITQLDGFDARGNIKVMFATNRPSTLDPALMRPGRIDRKIEFSLPDVE 359
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
R IL A+ ++ + I S+ C N +G
Sbjct: 360 GRANILRIHAKSMSVERDIRWELI--SRLCPNATG 392
Score = 302 (111.4 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 78/222 (35%), Positives = 113/222 (50%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG + +E+L+ V +PL P+ LG+ P G LLYGPPG GKT A A+AN T
Sbjct: 184 YGDVGGCKEQIEKLREVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKTLCARAVANRT 243
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR--ENLQREM 240
F ++ +E+V G +R+LF A I+F DEIDA+ R + +
Sbjct: 244 DATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDN 303
Query: 241 E-RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
E +R + +L+T +D G G + V+ ATNRP +DPAL RPGR
Sbjct: 304 EVQRTMLELITQLD--------GFDAR---------GNIKVMFATNRPSTLDPALMRPGR 346
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTP 341
DR+I +PD R IL + +++ VE I+R P
Sbjct: 347 IDRKIEFSLPDVEGRANILRIHAKSMSVERDIRWELISRLCP 388
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 386 (140.9 bits), Expect = 2.5e-35, P = 2.5e-35
Identities = 84/207 (40%), Positives = 122/207 (58%)
Query: 423 IPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKA 482
+P+ +E +GGLD E I +K PE +E G+ G LLYGPPG GKTL+A+A
Sbjct: 149 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 208
Query: 483 VANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---G 539
VA+ FI + G EL+ K++GE VR LF AR +P I+F DE+D++ + R G
Sbjct: 209 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGG 268
Query: 540 KEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTP 599
G V+R + +LL +LDG + K + VI ATNR D++D A+LRPGR + + P P
Sbjct: 269 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 328
Query: 600 DERGLILEALARKKPIDDSVDLHTIAQ 626
+ R IL+ +RK + ++L IA+
Sbjct: 329 EARLDILKIHSRKMNLTRGINLRKIAE 355
Score = 335 (123.0 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 82/224 (36%), Positives = 125/224 (55%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++ +GG++ ++E+K + +P+ HP+L + LG+ G+LLYGPPG GKT LA A+A+ T
Sbjct: 154 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 213
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR----ENLQR 238
F ++S +E+V G +R+LF A APSI+F+DEID+I S R
Sbjct: 214 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDS 273
Query: 239 EMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPG 298
E++R ++ +L+ +D G + VI ATNR D +D AL RPG
Sbjct: 274 EVQRTML-ELLNQLD--------GFEATKN---------IKVIMATNRIDILDSALLRPG 315
Query: 299 RFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPG 342
R DR+I P+E AR+ IL + +R + + +L KIA PG
Sbjct: 316 RIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPG 359
Score = 38 (18.4 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 396 RLTITMTDFEEAT-KMVQPSSRR 417
R+ +T DFE A K++Q S +
Sbjct: 381 RVHVTQEDFEMAVAKVMQKDSEK 403
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 386 (140.9 bits), Expect = 2.5e-35, P = 2.5e-35
Identities = 84/207 (40%), Positives = 122/207 (58%)
Query: 423 IPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKA 482
+P+ +E +GGLD E I +K PE +E G+ G LLYGPPG GKTL+A+A
Sbjct: 143 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 202
Query: 483 VANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---G 539
VA+ FI + G EL+ K++GE VR LF AR +P I+F DE+D++ + R G
Sbjct: 203 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGG 262
Query: 540 KEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTP 599
G V+R + +LL +LDG + K + VI ATNR D++D A+LRPGR + + P P
Sbjct: 263 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 322
Query: 600 DERGLILEALARKKPIDDSVDLHTIAQ 626
+ R IL+ +RK + ++L IA+
Sbjct: 323 EARLDILKIHSRKMNLTRGINLRKIAE 349
Score = 335 (123.0 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 82/224 (36%), Positives = 125/224 (55%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++ +GG++ ++E+K + +P+ HP+L + LG+ G+LLYGPPG GKT LA A+A+ T
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR----ENLQR 238
F ++S +E+V G +R+LF A APSI+F+DEID+I S R
Sbjct: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDS 267
Query: 239 EMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPG 298
E++R ++ +L+ +D G + VI ATNR D +D AL RPG
Sbjct: 268 EVQRTML-ELLNQLD--------GFEATKN---------IKVIMATNRIDILDSALLRPG 309
Query: 299 RFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPG 342
R DR+I P+E AR+ IL + +R + + +L KIA PG
Sbjct: 310 RIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPG 353
Score = 38 (18.4 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 396 RLTITMTDFEEAT-KMVQPSSRR 417
R+ +T DFE A K++Q S +
Sbjct: 375 RVHVTQEDFEMAVAKVMQKDSEK 397
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 386 (140.9 bits), Expect = 2.5e-35, P = 2.5e-35
Identities = 84/207 (40%), Positives = 122/207 (58%)
Query: 423 IPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKA 482
+P+ +E +GGLD E I +K PE +E G+ G LLYGPPG GKTL+A+A
Sbjct: 143 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 202
Query: 483 VANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---G 539
VA+ FI + G EL+ K++GE VR LF AR +P I+F DE+D++ + R G
Sbjct: 203 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGG 262
Query: 540 KEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTP 599
G V+R + +LL +LDG + K + VI ATNR D++D A+LRPGR + + P P
Sbjct: 263 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 322
Query: 600 DERGLILEALARKKPIDDSVDLHTIAQ 626
+ R IL+ +RK + ++L IA+
Sbjct: 323 EARLDILKIHSRKMNLTRGINLRKIAE 349
Score = 335 (123.0 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 82/224 (36%), Positives = 125/224 (55%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++ +GG++ ++E+K + +P+ HP+L + LG+ G+LLYGPPG GKT LA A+A+ T
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR----ENLQR 238
F ++S +E+V G +R+LF A APSI+F+DEID+I S R
Sbjct: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDS 267
Query: 239 EMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPG 298
E++R ++ +L+ +D G + VI ATNR D +D AL RPG
Sbjct: 268 EVQRTML-ELLNQLD--------GFEATKN---------IKVIMATNRIDILDSALLRPG 309
Query: 299 RFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPG 342
R DR+I P+E AR+ IL + +R + + +L KIA PG
Sbjct: 310 RIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPG 353
Score = 38 (18.4 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 396 RLTITMTDFEEAT-KMVQPSSRR 417
R+ +T DFE A K++Q S +
Sbjct: 375 RVHVTQEDFEMAVAKVMQKDSEK 397
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 386 (140.9 bits), Expect = 2.5e-35, P = 2.5e-35
Identities = 84/207 (40%), Positives = 122/207 (58%)
Query: 423 IPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKA 482
+P+ +E +GGLD E I +K PE +E G+ G LLYGPPG GKTL+A+A
Sbjct: 143 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 202
Query: 483 VANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---G 539
VA+ FI + G EL+ K++GE VR LF AR +P I+F DE+D++ + R G
Sbjct: 203 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGG 262
Query: 540 KEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTP 599
G V+R + +LL +LDG + K + VI ATNR D++D A+LRPGR + + P P
Sbjct: 263 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 322
Query: 600 DERGLILEALARKKPIDDSVDLHTIAQ 626
+ R IL+ +RK + ++L IA+
Sbjct: 323 EARLDILKIHSRKMNLTRGINLRKIAE 349
Score = 335 (123.0 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 82/224 (36%), Positives = 125/224 (55%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++ +GG++ ++E+K + +P+ HP+L + LG+ G+LLYGPPG GKT LA A+A+ T
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR----ENLQR 238
F ++S +E+V G +R+LF A APSI+F+DEID+I S R
Sbjct: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDS 267
Query: 239 EMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPG 298
E++R ++ +L+ +D G + VI ATNR D +D AL RPG
Sbjct: 268 EVQRTML-ELLNQLD--------GFEATKN---------IKVIMATNRIDILDSALLRPG 309
Query: 299 RFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPG 342
R DR+I P+E AR+ IL + +R + + +L KIA PG
Sbjct: 310 RIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPG 353
Score = 38 (18.4 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 396 RLTITMTDFEEAT-KMVQPSSRR 417
R+ +T DFE A K++Q S +
Sbjct: 375 RVHVTQEDFEMAVAKVMQKDSEK 397
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 386 (140.9 bits), Expect = 2.5e-35, P = 2.5e-35
Identities = 84/207 (40%), Positives = 122/207 (58%)
Query: 423 IPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKA 482
+P+ +E +GGLD E I +K PE +E G+ G LLYGPPG GKTL+A+A
Sbjct: 143 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 202
Query: 483 VANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---G 539
VA+ FI + G EL+ K++GE VR LF AR +P I+F DE+D++ + R G
Sbjct: 203 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGG 262
Query: 540 KEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTP 599
G V+R + +LL +LDG + K + VI ATNR D++D A+LRPGR + + P P
Sbjct: 263 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 322
Query: 600 DERGLILEALARKKPIDDSVDLHTIAQ 626
+ R IL+ +RK + ++L IA+
Sbjct: 323 EARLDILKIHSRKMNLTRGINLRKIAE 349
Score = 335 (123.0 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 82/224 (36%), Positives = 125/224 (55%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++ +GG++ ++E+K + +P+ HP+L + LG+ G+LLYGPPG GKT LA A+A+ T
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR----ENLQR 238
F ++S +E+V G +R+LF A APSI+F+DEID+I S R
Sbjct: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDS 267
Query: 239 EMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPG 298
E++R ++ +L+ +D G + VI ATNR D +D AL RPG
Sbjct: 268 EVQRTML-ELLNQLD--------GFEATKN---------IKVIMATNRIDILDSALLRPG 309
Query: 299 RFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPG 342
R DR+I P+E AR+ IL + +R + + +L KIA PG
Sbjct: 310 RIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPG 353
Score = 38 (18.4 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 396 RLTITMTDFEEAT-KMVQPSSRR 417
R+ +T DFE A K++Q S +
Sbjct: 375 RVHVTQEDFEMAVAKVMQKDSEK 397
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 386 (140.9 bits), Expect = 2.5e-35, P = 2.5e-35
Identities = 84/207 (40%), Positives = 122/207 (58%)
Query: 423 IPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKA 482
+P+ +E +GGLD E I +K PE +E G+ G LLYGPPG GKTL+A+A
Sbjct: 151 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 210
Query: 483 VANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---G 539
VA+ FI + G EL+ K++GE VR LF AR +P I+F DE+D++ + R G
Sbjct: 211 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGG 270
Query: 540 KEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTP 599
G V+R + +LL +LDG + K + VI ATNR D++D A+LRPGR + + P P
Sbjct: 271 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 330
Query: 600 DERGLILEALARKKPIDDSVDLHTIAQ 626
+ R IL+ +RK + ++L IA+
Sbjct: 331 EARLDILKIHSRKMNLTRGINLRKIAE 357
Score = 335 (123.0 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 82/224 (36%), Positives = 125/224 (55%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++ +GG++ ++E+K + +P+ HP+L + LG+ G+LLYGPPG GKT LA A+A+ T
Sbjct: 156 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 215
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR----ENLQR 238
F ++S +E+V G +R+LF A APSI+F+DEID+I S R
Sbjct: 216 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDS 275
Query: 239 EMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPG 298
E++R ++ +L+ +D G + VI ATNR D +D AL RPG
Sbjct: 276 EVQRTML-ELLNQLD--------GFEATKN---------IKVIMATNRIDILDSALLRPG 317
Query: 299 RFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPG 342
R DR+I P+E AR+ IL + +R + + +L KIA PG
Sbjct: 318 RIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPG 361
Score = 38 (18.4 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 396 RLTITMTDFEEAT-KMVQPSSRR 417
R+ +T DFE A K++Q S +
Sbjct: 383 RVHVTQEDFEMAVAKVMQKDSEK 405
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 386 (140.9 bits), Expect = 2.5e-35, P = 2.5e-35
Identities = 84/207 (40%), Positives = 122/207 (58%)
Query: 423 IPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKA 482
+P+ +E +GGLD E I +K PE +E G+ G LLYGPPG GKTL+A+A
Sbjct: 151 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 210
Query: 483 VANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---G 539
VA+ FI + G EL+ K++GE VR LF AR +P I+F DE+D++ + R G
Sbjct: 211 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGG 270
Query: 540 KEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTP 599
G V+R + +LL +LDG + K + VI ATNR D++D A+LRPGR + + P P
Sbjct: 271 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 330
Query: 600 DERGLILEALARKKPIDDSVDLHTIAQ 626
+ R IL+ +RK + ++L IA+
Sbjct: 331 EARLDILKIHSRKMNLTRGINLRKIAE 357
Score = 335 (123.0 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 82/224 (36%), Positives = 125/224 (55%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++ +GG++ ++E+K + +P+ HP+L + LG+ G+LLYGPPG GKT LA A+A+ T
Sbjct: 156 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 215
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR----ENLQR 238
F ++S +E+V G +R+LF A APSI+F+DEID+I S R
Sbjct: 216 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDS 275
Query: 239 EMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPG 298
E++R ++ +L+ +D G + VI ATNR D +D AL RPG
Sbjct: 276 EVQRTML-ELLNQLD--------GFEATKN---------IKVIMATNRIDILDSALLRPG 317
Query: 299 RFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPG 342
R DR+I P+E AR+ IL + +R + + +L KIA PG
Sbjct: 318 RIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPG 361
Score = 38 (18.4 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 396 RLTITMTDFEEAT-KMVQPSSRR 417
R+ +T DFE A K++Q S +
Sbjct: 383 RVHVTQEDFEMAVAKVMQKDSEK 405
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 386 (140.9 bits), Expect = 2.5e-35, P = 2.5e-35
Identities = 84/207 (40%), Positives = 122/207 (58%)
Query: 423 IPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKA 482
+P+ +E +GGLD E I +K PE +E G+ G LLYGPPG GKTL+A+A
Sbjct: 143 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 202
Query: 483 VANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---G 539
VA+ FI + G EL+ K++GE VR LF AR +P I+F DE+D++ + R G
Sbjct: 203 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGG 262
Query: 540 KEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTP 599
G V+R + +LL +LDG + K + VI ATNR D++D A+LRPGR + + P P
Sbjct: 263 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 322
Query: 600 DERGLILEALARKKPIDDSVDLHTIAQ 626
+ R IL+ +RK + ++L IA+
Sbjct: 323 EARLDILKIHSRKMNLTRGINLRKIAE 349
Score = 335 (123.0 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 82/224 (36%), Positives = 125/224 (55%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++ +GG++ ++E+K + +P+ HP+L + LG+ G+LLYGPPG GKT LA A+A+ T
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR----ENLQR 238
F ++S +E+V G +R+LF A APSI+F+DEID+I S R
Sbjct: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDS 267
Query: 239 EMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPG 298
E++R ++ +L+ +D G + VI ATNR D +D AL RPG
Sbjct: 268 EVQRTML-ELLNQLD--------GFEATKN---------IKVIMATNRIDILDSALLRPG 309
Query: 299 RFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPG 342
R DR+I P+E AR+ IL + +R + + +L KIA PG
Sbjct: 310 RIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPG 353
Score = 38 (18.4 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 396 RLTITMTDFEEAT-KMVQPSSRR 417
R+ +T DFE A K++Q S +
Sbjct: 375 RVHVTQEDFEMAVAKVMQKDSEK 397
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 386 (140.9 bits), Expect = 2.5e-35, P = 2.5e-35
Identities = 84/207 (40%), Positives = 122/207 (58%)
Query: 423 IPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKA 482
+P+ +E +GGLD E I +K PE +E G+ G LLYGPPG GKTL+A+A
Sbjct: 143 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 202
Query: 483 VANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---G 539
VA+ FI + G EL+ K++GE VR LF AR +P I+F DE+D++ + R G
Sbjct: 203 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGG 262
Query: 540 KEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTP 599
G V+R + +LL +LDG + K + VI ATNR D++D A+LRPGR + + P P
Sbjct: 263 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 322
Query: 600 DERGLILEALARKKPIDDSVDLHTIAQ 626
+ R IL+ +RK + ++L IA+
Sbjct: 323 EARLDILKIHSRKMNLTRGINLRKIAE 349
Score = 335 (123.0 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 82/224 (36%), Positives = 125/224 (55%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++ +GG++ ++E+K + +P+ HP+L + LG+ G+LLYGPPG GKT LA A+A+ T
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR----ENLQR 238
F ++S +E+V G +R+LF A APSI+F+DEID+I S R
Sbjct: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDS 267
Query: 239 EMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPG 298
E++R ++ +L+ +D G + VI ATNR D +D AL RPG
Sbjct: 268 EVQRTML-ELLNQLD--------GFEATKN---------IKVIMATNRIDILDSALLRPG 309
Query: 299 RFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPG 342
R DR+I P+E AR+ IL + +R + + +L KIA PG
Sbjct: 310 RIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPG 353
Score = 38 (18.4 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 396 RLTITMTDFEEAT-KMVQPSSRR 417
R+ +T DFE A K++Q S +
Sbjct: 375 RVHVTQEDFEMAVAKVMQKDSEK 397
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 386 (140.9 bits), Expect = 2.5e-35, P = 2.5e-35
Identities = 84/207 (40%), Positives = 122/207 (58%)
Query: 423 IPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKA 482
+P+ +E +GGLD E I +K PE +E G+ G LLYGPPG GKTL+A+A
Sbjct: 143 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 202
Query: 483 VANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---G 539
VA+ FI + G EL+ K++GE VR LF AR +P I+F DE+D++ + R G
Sbjct: 203 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGG 262
Query: 540 KEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTP 599
G V+R + +LL +LDG + K + VI ATNR D++D A+LRPGR + + P P
Sbjct: 263 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 322
Query: 600 DERGLILEALARKKPIDDSVDLHTIAQ 626
+ R IL+ +RK + ++L IA+
Sbjct: 323 EARLDILKIHSRKMNLTRGINLRKIAE 349
Score = 335 (123.0 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 82/224 (36%), Positives = 125/224 (55%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++ +GG++ ++E+K + +P+ HP+L + LG+ G+LLYGPPG GKT LA A+A+ T
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR----ENLQR 238
F ++S +E+V G +R+LF A APSI+F+DEID+I S R
Sbjct: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDS 267
Query: 239 EMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPG 298
E++R ++ +L+ +D G + VI ATNR D +D AL RPG
Sbjct: 268 EVQRTML-ELLNQLD--------GFEATKN---------IKVIMATNRIDILDSALLRPG 309
Query: 299 RFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPG 342
R DR+I P+E AR+ IL + +R + + +L KIA PG
Sbjct: 310 RIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPG 353
Score = 38 (18.4 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 396 RLTITMTDFEEAT-KMVQPSSRR 417
R+ +T DFE A K++Q S +
Sbjct: 375 RVHVTQEDFEMAVAKVMQKDSEK 397
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 386 (140.9 bits), Expect = 2.5e-35, P = 2.5e-35
Identities = 84/207 (40%), Positives = 122/207 (58%)
Query: 423 IPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKA 482
+P+ ++ VGGLD E I +K PE +E G+ G +LYGPPG GKTL+A+A
Sbjct: 138 VPDSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARA 197
Query: 483 VANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GK 540
VA+ FI + G EL+ KY+GE VR LF AR +P I+F DE+D++ + R G
Sbjct: 198 VAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGS 257
Query: 541 EGG-WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTP 599
GG V+R + +LL +LDG + K + +I ATNR D++D A+LRPGR + + P PT
Sbjct: 258 SGGDSEVQRTMLELLNQLDGFESSKDIKIIMATNRLDILDPALLRPGRIDRKIEFPAPTV 317
Query: 600 DERGLILEALARKKPIDDSVDLHTIAQ 626
R IL+ +R + ++L IA+
Sbjct: 318 AARTDILKIHSRSMNLTRGINLRKIAE 344
Score = 321 (118.1 bits), Expect = 3.8e-28, P = 3.8e-28
Identities = 75/217 (34%), Positives = 117/217 (53%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVP 185
+GG++ ++E+K + +P+ HP+L + LG+ G++LYGPPG GKT LA A+A+ T
Sbjct: 146 VGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTECK 205
Query: 186 FYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIV 245
F ++S +E+V G +R+LF A APSI+F+DEID+I S R + +
Sbjct: 206 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQ 265
Query: 246 TQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDREIV 305
++ +++ G + +I ATNR D +DPAL RPGR DR+I
Sbjct: 266 RTMLELLNQLD-----GFESSKD---------IKIIMATNRLDILDPALLRPGRIDRKIE 311
Query: 306 LGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPG 342
P AR IL + +R++ + +L KIA G
Sbjct: 312 FPAPTVAARTDILKIHSRSMNLTRGINLRKIAEKMNG 348
>MGI|MGI:1916847 [details] [associations]
symbol:Afg3l2 "AFG3(ATPase family gene 3)-like 2 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IGI] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008053 "mitochondrial fusion"
evidence=IGI] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016265 "death" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0021675 "nerve development" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IGI] [GO:0040014
"regulation of multicellular organism growth" evidence=IMP]
[GO:0042407 "cristae formation" evidence=IGI] [GO:0042552
"myelination" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IMP]
[GO:0060013 "righting reflex" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1916847
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
MEROPS:M41.007 EMBL:BC036999 EMBL:BC043056 IPI:IPI00170357
RefSeq:NP_081406.1 UniGene:Mm.426052 ProteinModelPortal:Q8JZQ2
SMR:Q8JZQ2 IntAct:Q8JZQ2 STRING:Q8JZQ2 PhosphoSite:Q8JZQ2
PaxDb:Q8JZQ2 PRIDE:Q8JZQ2 Ensembl:ENSMUST00000025408 GeneID:69597
KEGG:mmu:69597 UCSC:uc008fmf.1 InParanoid:Q8JZQ2 NextBio:329880
Bgee:Q8JZQ2 CleanEx:MM_AFG3L2 Genevestigator:Q8JZQ2
GermOnline:ENSMUSG00000024527 Uniprot:Q8JZQ2
Length = 802
Score = 407 (148.3 bits), Expect = 2.6e-35, P = 2.6e-35
Identities = 98/279 (35%), Positives = 149/279 (53%)
Query: 425 NVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVA 484
+VK++DV G + + E + V +K P++Y++ G + G +L GPPG GKTL+AKA A
Sbjct: 303 DVKFKDVAGCEEAKLEIMEF-VNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATA 361
Query: 485 NEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE--G 542
EA FI + G E L +VG VR LF+ AR +PCILF DE+DA+ KRG+ G
Sbjct: 362 GEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFG 421
Query: 543 GWVV-ERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDE 601
G E LNQLL+E+DG + V ++ TNRPD++D A+LRPGRF + +++ P
Sbjct: 422 GQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKG 481
Query: 602 RGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSS 661
R I + R +D +++ + K L+ LI+++ S
Sbjct: 482 RASIFKVHLRPLKLDSALE-----KDKLARKLASLTPGFSGADVANVCNEAALIAARHLS 536
Query: 662 DVTPFTIKLTHFEQALSKISPSVSE----LQIQRYKTLS 696
D I HFEQA+ ++ + + LQ + KT++
Sbjct: 537 DA----INEKHFEQAIERVIGGLEKKTQVLQPEEKKTVA 571
Score = 343 (125.8 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 91/230 (39%), Positives = 122/230 (53%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
+F+D+ G E E+ ME + L +P+ Q LG + G +L GPPG GKT LA A A E
Sbjct: 305 KFKDVAGCEEAKLEI-MEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGE 363
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE--NL--Q 237
VPF +S +E + G +RDLF+ A + AP I+FIDEIDA+ KR N Q
Sbjct: 364 ANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQ 423
Query: 238 REMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRP 297
E E + QL+ MD G V+++ TNRPD +DPAL RP
Sbjct: 424 SEQENTL-NQLLVEMD--------GFNTTTN---------VVILAGTNRPDILDPALLRP 465
Query: 298 GRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARS----TPGF 343
GRFDR+I +G PD R I V R L+++ + + K+AR TPGF
Sbjct: 466 GRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGF 515
>UNIPROTKB|F1LN92 [details] [associations]
symbol:Afg3l2 "Protein Afg3l2" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0021675 "nerve development" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1305259
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
IPI:IPI00192903 RefSeq:NP_001128336.1 UniGene:Rn.8386
ProteinModelPortal:F1LN92 PRIDE:F1LN92 Ensembl:ENSRNOT00000024632
GeneID:307350 KEGG:rno:307350 NextBio:657254 ArrayExpress:F1LN92
Uniprot:F1LN92
Length = 802
Score = 407 (148.3 bits), Expect = 2.6e-35, P = 2.6e-35
Identities = 98/279 (35%), Positives = 149/279 (53%)
Query: 425 NVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVA 484
+VK++DV G + + E + V +K P++Y++ G + G +L GPPG GKTL+AKA A
Sbjct: 303 DVKFKDVAGCEEAKLEIMEF-VNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATA 361
Query: 485 NEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE--G 542
EA FI + G E L +VG VR LF+ AR +PCILF DE+DA+ KRG+ G
Sbjct: 362 GEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFG 421
Query: 543 GWVV-ERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDE 601
G E LNQLL+E+DG + V ++ TNRPD++D A+LRPGRF + +++ P
Sbjct: 422 GQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKG 481
Query: 602 RGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSS 661
R I + R +D +++ + K L+ LI+++ S
Sbjct: 482 RASIFKVHLRPLKLDSALE-----KDKLARKLASLTPGFSGADVANVCNEAALIAARHLS 536
Query: 662 DVTPFTIKLTHFEQALSKISPSVSE----LQIQRYKTLS 696
D I HFEQA+ ++ + + LQ + KT++
Sbjct: 537 DA----INEKHFEQAIERVIGGLEKKTQVLQPEEKKTVA 571
Score = 343 (125.8 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 91/230 (39%), Positives = 122/230 (53%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
+F+D+ G E E+ ME + L +P+ Q LG + G +L GPPG GKT LA A A E
Sbjct: 305 KFKDVAGCEEAKLEI-MEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGE 363
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE--NL--Q 237
VPF +S +E + G +RDLF+ A + AP I+FIDEIDA+ KR N Q
Sbjct: 364 ANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQ 423
Query: 238 REMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRP 297
E E + QL+ MD G V+++ TNRPD +DPAL RP
Sbjct: 424 SEQENTL-NQLLVEMD--------GFNTTTN---------VVILAGTNRPDILDPALLRP 465
Query: 298 GRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARS----TPGF 343
GRFDR+I +G PD R I V R L+++ + + K+AR TPGF
Sbjct: 466 GRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGF 515
>UNIPROTKB|E2QYF3 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0042407 "cristae
formation" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
EMBL:AAEX03005521 RefSeq:XP_547682.2 ProteinModelPortal:E2QYF3
Ensembl:ENSCAFT00000029872 GeneID:490560 KEGG:cfa:490560
Uniprot:E2QYF3
Length = 806
Score = 407 (148.3 bits), Expect = 2.6e-35, P = 2.6e-35
Identities = 97/279 (34%), Positives = 150/279 (53%)
Query: 425 NVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVA 484
+VK++DV G + + E + V +K P++Y++ G + G +L GPPG GKTL+AKA A
Sbjct: 305 DVKFKDVAGCEEAKLEIMEF-VNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATA 363
Query: 485 NEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE--G 542
EA FI + G E L +VG VR LF+ AR +PCILF DE+DA+ KRG+ G
Sbjct: 364 GEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFG 423
Query: 543 GWVV-ERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDE 601
G E LNQLL+E+DG + V ++ TNRPD++D A++RPGRF + +++ P
Sbjct: 424 GQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFIGPPDIKG 483
Query: 602 RGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSS 661
R I + R +D +++ + K L+ LI+++ S
Sbjct: 484 RASIFKVHLRPLKLDSALE-----KEKLARKLASLTPGFSGADVANVCNEAALIAARHLS 538
Query: 662 DVTPFTIKLTHFEQALSKISPSVSE----LQIQRYKTLS 696
D +I HFEQA+ ++ + + LQ + KT++
Sbjct: 539 D----SINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVA 573
Score = 345 (126.5 bits), Expect = 3.0e-28, P = 3.0e-28
Identities = 91/230 (39%), Positives = 122/230 (53%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
+F+D+ G E E+ ME + L +P+ Q LG + G +L GPPG GKT LA A A E
Sbjct: 307 KFKDVAGCEEAKLEI-MEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGE 365
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE--NL--Q 237
VPF +S +E + G +RDLF+ A + AP I+FIDEIDA+ KR N Q
Sbjct: 366 ANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQ 425
Query: 238 REMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRP 297
E E + QL+ MD G V+++ TNRPD +DPAL RP
Sbjct: 426 SEQENTL-NQLLVEMD--------GFNTTTN---------VVILAGTNRPDILDPALMRP 467
Query: 298 GRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARS----TPGF 343
GRFDR+I +G PD R I V R L+++ + + K+AR TPGF
Sbjct: 468 GRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKEKLARKLASLTPGF 517
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 385 (140.6 bits), Expect = 3.3e-35, P = 3.3e-35
Identities = 86/215 (40%), Positives = 123/215 (57%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P + D+GGLD E + + PE YEE G+ G +LYGPPG GKTL+AKAV
Sbjct: 179 PQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAV 238
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
AN+ A F+ + G EL+ KY+G+ VR LF A +P I+F DE+DA+ TKR
Sbjct: 239 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNS 298
Query: 542 GGW-VVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
GG ++R + +LL +LDG D R V VI ATNR + +D A++RPGR + + PLP
Sbjct: 299 GGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK 358
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
+ I + + + V+L + +K ++LSG
Sbjct: 359 TKRRIFTIHTSRMTLAEDVNLSELIMAK--DDLSG 391
Score = 354 (129.7 bits), Expect = 9.2e-32, P = 9.2e-32
Identities = 78/214 (36%), Positives = 125/214 (58%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+++ ++E+K V +PL HP+ + +G++P G++LYGPPG GKT LA A+AN+T
Sbjct: 183 YADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 242
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F ++ +E++ G + +R+LF A APSIVFIDEIDA+ +KR + ER
Sbjct: 243 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGER 302
Query: 243 RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDR 302
I ++ +++ G G V VI ATNR + +DPAL RPGR DR
Sbjct: 303 EIQRTMLELLNQLD-----GFDSR---------GDVKVIMATNRIETLDPALIRPGRIDR 348
Query: 303 EIVLGVPDENARVQILSVLTRNLRVEGSFDLVKI 336
+I +PDE + +I ++ T + + +L ++
Sbjct: 349 KIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSEL 382
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 385 (140.6 bits), Expect = 3.3e-35, P = 3.3e-35
Identities = 86/215 (40%), Positives = 122/215 (56%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+V + DVGG + + + PE Y G++ G LLYGPPG GKTL A+AV
Sbjct: 172 PDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAV 231
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---GK 540
AN A FI + G EL+ KYVGE VR LF ART C++FFDE+DA+ R G+
Sbjct: 232 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQ 291
Query: 541 EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R + +L+ +LDG D R + V+ ATNRPD +D A++RPGR + + LP
Sbjct: 292 GGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLA 351
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
R IL+ A++ ++ + +A + C N +G
Sbjct: 352 GRAHILKIHAKQMSVERDIRYDLLA--RLCPNSTG 384
Score = 314 (115.6 bits), Expect = 2.0e-26, P = 2.0e-26
Identities = 77/223 (34%), Positives = 114/223 (51%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG + +E+L+ V PL HP+ LG+ P G+LLYGPPG GKT A A+AN T
Sbjct: 176 YSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRT 235
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR----ENLQR 238
F ++ +E+V G +R+LF A ++F DEIDA+ R +
Sbjct: 236 DACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDN 295
Query: 239 EMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPG 298
E++R ++ +L+ +D P G + V+ ATNRPD +DPAL RPG
Sbjct: 296 EVQRTML-ELINQLDG----FDPR-------------GNIKVLMATNRPDTLDPALMRPG 337
Query: 299 RFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTP 341
R DR++ +PD R IL + + + VE +AR P
Sbjct: 338 RLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCP 380
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 385 (140.6 bits), Expect = 3.3e-35, P = 3.3e-35
Identities = 86/215 (40%), Positives = 122/215 (56%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+V + DVGG + + + PE Y G++ G LLYGPPG GKTL A+AV
Sbjct: 172 PDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAV 231
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---GK 540
AN A FI + G EL+ KYVGE VR LF ART C++FFDE+DA+ R G+
Sbjct: 232 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQ 291
Query: 541 EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R + +L+ +LDG D R + V+ ATNRPD +D A++RPGR + + LP
Sbjct: 292 GGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLA 351
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
R IL+ A++ ++ + +A + C N +G
Sbjct: 352 GRAHILKIHAKQMSVERDIRYDLLA--RLCPNSTG 384
Score = 314 (115.6 bits), Expect = 2.0e-26, P = 2.0e-26
Identities = 77/223 (34%), Positives = 114/223 (51%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG + +E+L+ V PL HP+ LG+ P G+LLYGPPG GKT A A+AN T
Sbjct: 176 YSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRT 235
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR----ENLQR 238
F ++ +E+V G +R+LF A ++F DEIDA+ R +
Sbjct: 236 DACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDN 295
Query: 239 EMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPG 298
E++R ++ +L+ +D P G + V+ ATNRPD +DPAL RPG
Sbjct: 296 EVQRTML-ELINQLDG----FDPR-------------GNIKVLMATNRPDTLDPALMRPG 337
Query: 299 RFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTP 341
R DR++ +PD R IL + + + VE +AR P
Sbjct: 338 RLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCP 380
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 364 (133.2 bits), Expect = 3.5e-35, Sum P(2) = 3.5e-35
Identities = 77/206 (37%), Positives = 119/206 (57%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P ++ D+GGLD E IV + E++E G+ G L+YGPPG GKTL+A+A
Sbjct: 139 PTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARAC 198
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---GK 540
A + A F+ + GP+L+ ++G+ VR F+ A+ +P I+F DE+DA+ TKR K
Sbjct: 199 AAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEK 258
Query: 541 EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R + +LL +LDG V VI ATNR D++D A+LR GR + + P+P +
Sbjct: 259 AGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEE 318
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQ 626
R I++ +RK + V+ +A+
Sbjct: 319 ARARIMQIHSRKMNVSPDVNYEELAR 344
Score = 358 (131.1 bits), Expect = 3.3e-32, P = 3.3e-32
Identities = 78/222 (35%), Positives = 128/222 (57%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
++ D+GG++ ++EL +++P+ H + + LG++P G+L+YGPPG GKT LA A A +
Sbjct: 142 QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQ 201
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREME 241
T F K++ ++V G + +RD F+ A APSI+FIDE+DAI +KR + ++ +
Sbjct: 202 TKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGD 261
Query: 242 RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFD 301
R + ++ +++ QP V VI ATNR D +DPAL R GR D
Sbjct: 262 REVQRTMLELLNQLDGF-QPNTQ-------------VKVIAATNRVDILDPALLRSGRLD 307
Query: 302 REIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
R+I +P+E AR +I+ + +R + V + ++AR T F
Sbjct: 308 RKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDF 349
Score = 43 (20.2 bits), Expect = 3.5e-35, Sum P(2) = 3.5e-35
Identities = 14/65 (21%), Positives = 30/65 (46%)
Query: 360 MKRIIDQRKSELSGNSIAEQHSDDW-WRQPWLPEEMERLTITMTDFEEATKMVQPSSRRE 418
M + D+ + + G + + +++ R L E++ L + D EE + S+R+
Sbjct: 17 MATVWDEAEQDGIGEEVLKMSTEEIIQRTRLLDSEIKLLDVDPNDQEEDGANIDLDSQRK 76
Query: 419 GFSAI 423
G A+
Sbjct: 77 GKCAV 81
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 402 (146.6 bits), Expect = 3.7e-35, P = 3.7e-35
Identities = 88/204 (43%), Positives = 124/204 (60%)
Query: 426 VKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVAN 485
V ++DV G+D + E + IV ++ P+++ G + G LL GPPG GKTL+A+A+A
Sbjct: 153 VTFDDVAGIDEAKEELEE-IVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAG 211
Query: 486 EAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE-GGW 544
EAG F I G + + +VG VR +F +A+ +PCI+F DE+DA+ RG GG
Sbjct: 212 EAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRHRGAGYGGG 271
Query: 545 VVER--LLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDER 602
ER LNQLL+E+DG + +GV ++ ATNR DV+D A+LRPGRF + + V P R
Sbjct: 272 NDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRNVTVGNPDIKGR 331
Query: 603 GLILEALARKKPIDDSVDLHTIAQ 626
IL ARK P+ VDL IA+
Sbjct: 332 EKILGVHARKTPLGPDVDLRIIAR 355
Score = 357 (130.7 bits), Expect = 9.9e-30, Sum P(2) = 9.9e-30
Identities = 94/227 (41%), Positives = 122/227 (53%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
F D+ G++ EEL+ E++ L +PQ LG + G LL GPPG GKT LA AIA E
Sbjct: 155 FDDVAGIDEAKEELE-EIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAGEA 213
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE------NL 236
GVPF+ IS ++ V G +RD+F +A + AP IVFIDEIDA+ R N
Sbjct: 214 GVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRHRGAGYGGGND 273
Query: 237 QREMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRR 296
+RE + + QL+ MD G V+++ ATNR D +DPAL R
Sbjct: 274 ERE---QTLNQLLVEMDGFE--ANEG---------------VIILAATNRKDVLDPALLR 313
Query: 297 PGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
PGRFDR + +G PD R +IL V R + DL IAR TPGF
Sbjct: 314 PGRFDRNVTVGNPDIKGREKILGVHARKTPLGPDVDLRIIARGTPGF 360
Score = 40 (19.1 bits), Expect = 9.9e-30, Sum P(2) = 9.9e-30
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 396 RLTITMTDFEEAT-KMVQPSSRR 417
R +TM DFE A K++ + RR
Sbjct: 381 RRFVTMEDFENAKDKVMMGAERR 403
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 402 (146.6 bits), Expect = 3.7e-35, P = 3.7e-35
Identities = 88/204 (43%), Positives = 124/204 (60%)
Query: 426 VKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVAN 485
V ++DV G+D + E + IV ++ P+++ G + G LL GPPG GKTL+A+A+A
Sbjct: 153 VTFDDVAGIDEAKEELEE-IVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAG 211
Query: 486 EAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE-GGW 544
EAG F I G + + +VG VR +F +A+ +PCI+F DE+DA+ RG GG
Sbjct: 212 EAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRHRGAGYGGG 271
Query: 545 VVER--LLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDER 602
ER LNQLL+E+DG + +GV ++ ATNR DV+D A+LRPGRF + + V P R
Sbjct: 272 NDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRNVTVGNPDIKGR 331
Query: 603 GLILEALARKKPIDDSVDLHTIAQ 626
IL ARK P+ VDL IA+
Sbjct: 332 EKILGVHARKTPLGPDVDLRIIAR 355
Score = 357 (130.7 bits), Expect = 9.9e-30, Sum P(2) = 9.9e-30
Identities = 94/227 (41%), Positives = 122/227 (53%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
F D+ G++ EEL+ E++ L +PQ LG + G LL GPPG GKT LA AIA E
Sbjct: 155 FDDVAGIDEAKEELE-EIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAGEA 213
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE------NL 236
GVPF+ IS ++ V G +RD+F +A + AP IVFIDEIDA+ R N
Sbjct: 214 GVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRHRGAGYGGGND 273
Query: 237 QREMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRR 296
+RE + + QL+ MD G V+++ ATNR D +DPAL R
Sbjct: 274 ERE---QTLNQLLVEMDGFE--ANEG---------------VIILAATNRKDVLDPALLR 313
Query: 297 PGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
PGRFDR + +G PD R +IL V R + DL IAR TPGF
Sbjct: 314 PGRFDRNVTVGNPDIKGREKILGVHARKTPLGPDVDLRIIARGTPGF 360
Score = 40 (19.1 bits), Expect = 9.9e-30, Sum P(2) = 9.9e-30
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 396 RLTITMTDFEEAT-KMVQPSSRR 417
R +TM DFE A K++ + RR
Sbjct: 381 RRFVTMEDFENAKDKVMMGAERR 403
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 384 (140.2 bits), Expect = 4.2e-35, P = 4.2e-35
Identities = 83/207 (40%), Positives = 122/207 (58%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P + DVGGLD E IV +K +++++ G+ G L+YGPPG GKTL+A+A
Sbjct: 176 PTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARAC 235
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---GK 540
A + A F+ + P+L+ Y+GE VR F+ A+ +P I+F DE+DA+ TKR K
Sbjct: 236 AAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEK 295
Query: 541 EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R + +LL +LDG V V+ ATNR DV+D A+LR GR + + PLP+ D
Sbjct: 296 SGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSED 355
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQS 627
R IL+ +RK DD ++ +A+S
Sbjct: 356 SRAQILQIHSRKMTTDDDINWQELARS 382
Score = 340 (124.7 bits), Expect = 3.2e-30, P = 3.2e-30
Identities = 76/221 (34%), Positives = 124/221 (56%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG++ +EEL +++P+ + +G+R G L+YGPPG GKT LA A A +T
Sbjct: 180 YSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQT 239
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F K++A ++V G + +RD F+ A AP+I+FIDE+DAI +KR + ++ +R
Sbjct: 240 NATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKSGDR 299
Query: 243 RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDR 302
+ ++ +++ G V V+ ATNR D +DPAL R GR DR
Sbjct: 300 EVQRTMLELLNQLD-----GFSSDDR---------VKVLAATNRVDVLDPALLRSGRLDR 345
Query: 303 EIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
+I +P E++R QIL + +R + + + ++ARST F
Sbjct: 346 KIEFPLPSEDSRAQILQIHSRKMTTDDDINWQELARSTDEF 386
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 384 (140.2 bits), Expect = 4.2e-35, P = 4.2e-35
Identities = 85/215 (39%), Positives = 121/215 (56%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+V + DVGG + + + PE + G++ G LL+GPPG GKTL A+AV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---GK 540
AN A FI + G EL+ KYVGE VR LF ART C++FFDE+DA+ R G
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289
Query: 541 EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R + +L+ +LDG D R + V+ ATNRPD +D A++RPGR + + LP +
Sbjct: 290 GGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLE 349
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
R IL+ AR ++ + +A + C N +G
Sbjct: 350 GRTHILKIHARSMSVERDIRFELLA--RLCPNSTG 382
Score = 318 (117.0 bits), Expect = 8.1e-28, P = 8.1e-28
Identities = 79/222 (35%), Positives = 114/222 (51%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG + +E+L+ V PL HP+ LG+ P G+LL+GPPG GKT A A+AN T
Sbjct: 174 YSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRT 233
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR--ENLQREM 240
F ++ +E+V G +R+LF A ++F DEIDAI R + +
Sbjct: 234 DACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDN 293
Query: 241 E-RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
E +R + +L+ +D P G + V+ ATNRPD +DPAL RPGR
Sbjct: 294 EVQRTMLELINQLDG----FDPR-------------GNIKVLMATNRPDTLDPALMRPGR 336
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTP 341
DR+I +PD R IL + R++ VE +AR P
Sbjct: 337 LDRKIEFSLPDLEGRTHILKIHARSMSVERDIRFELLARLCP 378
>TAIR|locus:2094892 [details] [associations]
symbol:EMB2083 "embryo defective 2083" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0000023 "maltose metabolic process"
evidence=RCA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AB023046
eggNOG:COG0465 GO:GO:0017111 IPI:IPI00526963 RefSeq:NP_566541.1
UniGene:At.38918 ProteinModelPortal:A8MPR5 SMR:A8MPR5 STRING:A8MPR5
PaxDb:A8MPR5 PRIDE:A8MPR5 EnsemblPlants:AT3G16290.1 GeneID:820876
KEGG:ath:AT3G16290 TAIR:At3g16290 HOGENOM:HOG000015086
InParanoid:A8MPR5 OMA:FFTHGEM PhylomeDB:A8MPR5
ProtClustDB:CLSN2688442 Genevestigator:A8MPR5 Uniprot:A8MPR5
Length = 876
Score = 406 (148.0 bits), Expect = 4.7e-35, Sum P(2) = 4.7e-35
Identities = 95/239 (39%), Positives = 136/239 (56%)
Query: 392 EEMERLTITMTDFEEATKMVQPSSRR--EGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRI 449
E+ L + M + ++ + S++R E +VK+ DV GL +R E + IV+
Sbjct: 371 EKNPYLQMAMQFMKSGARVRRASNKRLPEYLERGVDVKFTDVAGLGKIRLELEE-IVKFF 429
Query: 450 KFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESEL 509
E Y GV + G LL GPPG GKTL+AKAVA EAG NF I + + YVG
Sbjct: 430 THGEMYRRRGVKIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGAS 489
Query: 510 AVRTLFSRARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGV 566
VR L+ AR +P ++F DE+DA+ +RG GG + LNQLL+ LDG + R V
Sbjct: 490 RVRALYQEARENAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVSLDGFEGRGEV 549
Query: 567 FVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
I +TNRPD++D A++RPGRF + +++P P R IL+ ARKKP+ + +D +A
Sbjct: 550 ITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILQVHARKKPMAEDLDYMAVA 608
Score = 324 (119.1 bits), Expect = 2.4e-25, Sum P(2) = 2.4e-25
Identities = 85/227 (37%), Positives = 122/227 (53%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLY-HPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIAN 180
+F D+ G+ + L++E IV + H ++ + GV+ GILL GPPG GKT LA A+A
Sbjct: 408 KFTDVAGLGKI--RLELEEIVKFFTHGEMYRRRGVKIPGGILLCGPPGVGKTLLAKAVAG 465
Query: 181 ETGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQRE- 239
E GV F+ ISA++ V G +R L+ +A APS+VFIDE+DA+ +R ++
Sbjct: 466 EAGVNFFSISASQFVEIYVGVGASRVRALYQEARENAPSVVFIDELDAVGRERGLIKGSG 525
Query: 240 -MER-RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRP 297
ER + QL+ +D G G V+ I +TNRPD +DPAL RP
Sbjct: 526 GQERDATLNQLLVSLD--------GFEGR---------GEVITIASTNRPDILDPALVRP 568
Query: 298 GRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFV 344
GRFDR+I + P R++IL V R + D + +A T G V
Sbjct: 569 GRFDRKIFIPKPGLIGRMEILQVHARKKPMAEDLDYMAVASMTDGMV 615
Score = 42 (19.8 bits), Expect = 4.7e-35, Sum P(2) = 4.7e-35
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 56 SMLRDSYSESKITRRKSEEK 75
S+ + S++ +K+T RK +K
Sbjct: 72 SLAKPSFAAAKVTERKRTQK 91
Score = 39 (18.8 bits), Expect = 9.7e-35, Sum P(2) = 9.7e-35
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 71 KSEEKNIEFEVMPRKIDLVNAKSREVEMKKEESV 104
K E K E+ + D + E+E KEE V
Sbjct: 219 KKESKRAA-ELKRMREDFKRQRKEEIETMKEERV 251
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 383 (139.9 bits), Expect = 5.5e-35, P = 5.5e-35
Identities = 84/207 (40%), Positives = 122/207 (58%)
Query: 423 IPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKA 482
+P+ +E VGGLD E I +K PE ++ G+ G LLYGPPG GKTL+A+A
Sbjct: 142 VPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 201
Query: 483 VANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---G 539
VA+ FI + G EL+ K++GE VR LF AR +P I+F DE+D++ + R G
Sbjct: 202 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESG 261
Query: 540 KEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTP 599
G V+R + +LL +LDG + K + VI ATNR D++D A+LRPGR + + P P
Sbjct: 262 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNE 321
Query: 600 DERGLILEALARKKPIDDSVDLHTIAQ 626
+ R IL+ +RK + ++L IA+
Sbjct: 322 EARLDILKIHSRKMNLTRGINLRKIAE 348
Score = 340 (124.7 bits), Expect = 6.2e-32, Sum P(2) = 6.2e-32
Identities = 83/223 (37%), Positives = 124/223 (55%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++ +GG++ ++E+K + +P+ HP+L LG+ G+LLYGPPG GKT LA A+A+ T
Sbjct: 147 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 206
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR--ENLQREM 240
F ++S +E+V G +R+LF A APSI+F+DEID+I S R +
Sbjct: 207 ECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDS 266
Query: 241 E-RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
E +R + +L+ +D G + VI ATNR D +DPAL RPGR
Sbjct: 267 EVQRTMLELLNQLD--------GFEATKN---------IKVIMATNRIDILDPALLRPGR 309
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPG 342
DR+I P+E AR+ IL + +R + + +L KIA PG
Sbjct: 310 IDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPG 352
Score = 38 (18.4 bits), Expect = 6.2e-32, Sum P(2) = 6.2e-32
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 396 RLTITMTDFEEAT-KMVQPSSRR 417
R+ +T DFE A K++Q S +
Sbjct: 374 RVHVTQEDFEMAVAKVMQKDSEK 396
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 383 (139.9 bits), Expect = 5.5e-35, P = 5.5e-35
Identities = 83/207 (40%), Positives = 124/207 (59%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P K+ D+GGLD E IV +K E +++ G+ G L+YGPPG GKTL+A+A
Sbjct: 206 PTEKYTDIGGLDKQIEEIVEAIVWPMKEAERFKKLGIKAPKGALMYGPPGTGKTLLARAC 265
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---GK 540
A E A F+ + GP+L+ ++G+ VR F+ A+ +P I+F DE+DA+ TKR K
Sbjct: 266 AAETNATFLKLAGPQLVQMFIGDGAKLVRDCFALAKEKAPSIIFIDELDAVGTKRFDSEK 325
Query: 541 EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R + +LL +LDG + V+ ATNR DV+D A+LR GR + + PLP +
Sbjct: 326 SGDREVQRTMLELLNQLDGFASDDRIKVLAATNRVDVLDPALLRSGRLDRKIEFPLPNEE 385
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQS 627
R IL+ +RK ++DSV+ +A+S
Sbjct: 386 ARANILQIHSRKMTVEDSVNWAELARS 412
Score = 347 (127.2 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 76/222 (34%), Positives = 124/222 (55%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
++ D+GG++ +EE+ ++ P+ + + LG++ G L+YGPPG GKT LA A A E
Sbjct: 209 KYTDIGGLDKQIEEIVEAIVWPMKEAERFKKLGIKAPKGALMYGPPGTGKTLLARACAAE 268
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREME 241
T F K++ ++V G + +RD F+ A APSI+FIDE+DA+ +KR + ++ +
Sbjct: 269 TNATFLKLAGPQLVQMFIGDGAKLVRDCFALAKEKAPSIIFIDELDAVGTKRFDSEKSGD 328
Query: 242 RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFD 301
R + ++ +++ + V+ ATNR D +DPAL R GR D
Sbjct: 329 REVQRTMLELLNQLDGFASDDR--------------IKVLAATNRVDVLDPALLRSGRLD 374
Query: 302 REIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
R+I +P+E AR IL + +R + VE S + ++ARST F
Sbjct: 375 RKIEFPLPNEEARANILQIHSRKMTVEDSVNWAELARSTDEF 416
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 383 (139.9 bits), Expect = 5.5e-35, P = 5.5e-35
Identities = 88/228 (38%), Positives = 122/228 (53%)
Query: 411 VQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYG 470
+ PS P+V + DVGG + + + PE + G+D G LLYG
Sbjct: 191 IDPSVTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYG 250
Query: 471 PPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDE 530
PPG GKTL A+AVAN A FI + G EL+ KYVGE VR LF ART CI+FFDE
Sbjct: 251 PPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDE 310
Query: 531 VDALTTKR---GKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGR 587
+DA+ R G G V+R + +L+ +LDG D R + V+ ATNRP+ +D A+LRPGR
Sbjct: 311 IDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGR 370
Query: 588 FGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
+ + LP + R I ++ ++ + I S+ C N +G
Sbjct: 371 IDRKVEFSLPDLEGRANIFRIHSKSMSVERGIRWELI--SRLCPNSTG 416
Score = 306 (112.8 bits), Expect = 8.6e-25, P = 8.6e-25
Identities = 77/222 (34%), Positives = 115/222 (51%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG + +E+L+ V +PL P+ LG+ P GILLYGPPG GKT A A+AN T
Sbjct: 208 YSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRT 267
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR--ENLQREM 240
F ++ +E+V G +R+LF A I+F DEIDA+ R + +
Sbjct: 268 DATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDN 327
Query: 241 E-RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
E +R + +L+T +D P G + V+ ATNRP+ +DPAL RPGR
Sbjct: 328 EVQRTMLELITQLDG----FDPR-------------GNIKVMFATNRPNTLDPALLRPGR 370
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTP 341
DR++ +PD R I + ++++ VE I+R P
Sbjct: 371 IDRKVEFSLPDLEGRANIFRIHSKSMSVERGIRWELISRLCP 412
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 403 (146.9 bits), Expect = 6.3e-35, P = 6.3e-35
Identities = 93/219 (42%), Positives = 129/219 (58%)
Query: 415 SRREGFSA-IPNVKWEDVGGLDYLRHEFDRYIVRR-IKFPEEYEEFGVDLETGFLLYGPP 472
SR + S +P + DV G+D E Y ++ ++ P Y+ G + G LLYGPP
Sbjct: 148 SRAKQLSKDMPKTTFADVAGVDEAVEEL--YEIKDFLQNPSRYQALGAKIPKGVLLYGPP 205
Query: 473 GCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVD 532
G GKTL+A+AVA EAG F I G + + +VG VR LF +A+ SPCI+F DE+D
Sbjct: 206 GTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEID 265
Query: 533 ALTTKRGKE-GGWVVER--LLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFG 589
A+ +RG GG ER LNQLL+E+DG R GV +I ATNRPD++D A+LRPGRF
Sbjct: 266 AVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFD 325
Query: 590 KLLYVPLPTPDERG--LILEALARKKPIDDSVDLHTIAQ 626
+ +P+ PD G +L ++ KP+ DL +A+
Sbjct: 326 R--QIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAK 362
Score = 339 (124.4 bits), Expect = 4.9e-27, Sum P(2) = 4.9e-27
Identities = 88/223 (39%), Positives = 121/223 (54%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
F D+ G++ +EEL E+ L +P Q LG + G+LLYGPPG GKT LA A+A E
Sbjct: 162 FADVAGVDEAVEEL-YEIKDFLQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARAVAGEA 220
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR-ENLQREME 241
GVPF+ IS ++ V G +RDLF +A + +P I+F+DEIDA+ +R L +
Sbjct: 221 GVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGLGGGHD 280
Query: 242 RRIVT--QLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
R T QL+ MD G V++I ATNRPD +DPAL RPGR
Sbjct: 281 EREQTLNQLLVEMD--------GFGDRAG---------VILIAATNRPDILDPALLRPGR 323
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPG 342
FDR+I + PD R +L V ++ + DL +A+ T G
Sbjct: 324 FDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVG 366
Score = 39 (18.8 bits), Expect = 4.9e-27, Sum P(2) = 4.9e-27
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 395 ERLTITMTDFEEATKMVQPSSRREGFSA-IPNVKWEDVGGLDYL 437
E T ++D E+ATK+ + G S+ + VK+ G +L
Sbjct: 493 EPTTGAVSDIEQATKIARSMVTEFGMSSKLGAVKYGSEHGDPFL 536
>CGD|CAL0000992 [details] [associations]
symbol:VPS4 species:5476 "Candida albicans" [GO:0006623
"protein targeting to vacuole" evidence=IMP] [GO:0007033 "vacuole
organization" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0045324
"late endosome to vacuole transport" evidence=IMP] [GO:0000815
"ESCRT III complex" evidence=ISS] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0009306 "protein secretion" evidence=IMP]
[GO:0071285 "cellular response to lithium ion" evidence=IMP]
[GO:0030448 "hyphal growth" evidence=IMP] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0045053 "protein retention in Golgi
apparatus" evidence=IEA] [GO:0070676 "intralumenal vesicle
formation" evidence=IEA] [GO:0043328 "protein targeting to vacuole
involved in ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0016125
"sterol metabolic process" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0000992 GO:GO:0005524 GO:GO:0009405 GO:GO:0009306
Pfam:PF04212 eggNOG:COG0464 GO:GO:0017111 InterPro:IPR015415
Pfam:PF09336 GO:GO:0030448 GO:GO:0007033 GO:GO:0006623
GO:GO:0045324 GO:GO:0000815 GO:GO:0071285 EMBL:AACQ01000022
GO:GO:0044182 SMART:SM00745 KO:K12196 RefSeq:XP_720644.1
ProteinModelPortal:Q5AG40 SMR:Q5AG40 STRING:Q5AG40 GeneID:3637703
KEGG:cal:CaO19.4339 Uniprot:Q5AG40
Length = 439
Score = 359 (131.4 bits), Expect = 6.4e-35, Sum P(2) = 6.4e-35
Identities = 86/228 (37%), Positives = 130/228 (57%)
Query: 403 DFEEA-TKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVD 461
D ++A TK ++ + S PNVKW D+ GLD + ++ +KFP+ + G
Sbjct: 108 DNDDADTKKLRGALAGAILSEKPNVKWSDIAGLDAAKEALKEAVILPVKFPQLF--VGNR 165
Query: 462 LET-GFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRART 520
T G LLYGPPG GK+ +AKAVA EA + F + +L++K++GESE V+ LF+ AR
Sbjct: 166 KPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESERLVKQLFTMARE 225
Query: 521 CSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGA-DKRKGVFVIGATNRPDVMD 579
P I+F DEVDAL RG+ R+ +LL++++G + +GV V+GATN P +D
Sbjct: 226 NKPSIIFIDEVDALCGPRGEGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLD 285
Query: 580 RAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSV-DLHTIAQ 626
AV R RF + +Y+ LP + R + E P + + D T+A+
Sbjct: 286 AAVRR--RFERRIYIALPDVEARTRMFEINIGDVPCECTPHDYRTLAE 331
Score = 281 (104.0 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 70/176 (39%), Positives = 102/176 (57%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVR-PMAGILLYGPPGCGKTKLAHAIAN 180
++ D+ G+++ E LK VI+P+ PQL ++G R P +GILLYGPPG GK+ LA A+A
Sbjct: 133 KWSDIAGLDAAKEALKEAVILPVKFPQL--FVGNRKPTSGILLYGPPGTGKSYLAKAVAT 190
Query: 181 ETGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREM 240
E F+ +S++++VS G SE ++ LF+ A PSI+FIDE+DA+ R + E
Sbjct: 191 EANSTFFSVSSSDLVSKWMGESERLVKQLFTMARENKPSIIFIDEVDALCGPRGEGESEA 250
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRR 296
RRI T+L+ M+ G VLV+GATN P +D A+RR
Sbjct: 251 SRRIKTELLVQMN---------------GVGNDSQG-VLVLGATNIPWQLDAAVRR 290
Score = 101 (40.6 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 43/168 (25%), Positives = 78/168 (46%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGS-FDLVKI 336
VLV+GATN P +D A+RR RF+R I + +PD AR ++ + ++ E + D +
Sbjct: 272 VLVLGATNIPWQLDAAVRR--RFERRIYIALPDVEARTRMFEINIGDVPCECTPHDYRTL 329
Query: 337 ARSTPGFVXXXXXXXXXXXXXXXMKRI---------IDQR--KSELSGNSIAEQHSDDWW 385
A T G+ +++I ID+ K +L+ S ++ + +
Sbjct: 330 AEMTDGYSGHDVAVVVRDALMQPIRKIQQATHFKPVIDETDGKEKLTPCSPGDEGAREMN 389
Query: 386 RQPWLPEEMERLTITMTDFEEATKMVQPSSRREGFSAIPNVKW-EDVG 432
+E++ +T+ DF +A K +P+ + +VK+ ED G
Sbjct: 390 WMDLATDELKEPPLTIKDFIKAIKNNRPTVNEADIAQ--HVKFTEDFG 435
Score = 46 (21.3 bits), Expect = 6.4e-35, Sum P(2) = 6.4e-35
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 665 PFTIKLTHFEQALSKISPSVSELQIQRYKTLSETF 699
P TIK F +A+ P+V+E I ++ +E F
Sbjct: 402 PLTIK--DFIKAIKNNRPTVNEADIAQHVKFTEDF 434
>UNIPROTKB|Q5AG40 [details] [associations]
symbol:VPS4 "Potential vacuolar sorting ATPase"
species:237561 "Candida albicans SC5314" [GO:0000815 "ESCRT III
complex" evidence=ISS] [GO:0006623 "protein targeting to vacuole"
evidence=IMP] [GO:0007033 "vacuole organization" evidence=IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0030448 "hyphal growth" evidence=IMP] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0045324 "late endosome to vacuole transport"
evidence=IMP] [GO:0071285 "cellular response to lithium ion"
evidence=IMP] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000992 GO:GO:0005524 GO:GO:0009405
GO:GO:0009306 Pfam:PF04212 eggNOG:COG0464 GO:GO:0017111
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030448 GO:GO:0007033
GO:GO:0006623 GO:GO:0045324 GO:GO:0000815 GO:GO:0071285
EMBL:AACQ01000022 GO:GO:0044182 SMART:SM00745 KO:K12196
RefSeq:XP_720644.1 ProteinModelPortal:Q5AG40 SMR:Q5AG40
STRING:Q5AG40 GeneID:3637703 KEGG:cal:CaO19.4339 Uniprot:Q5AG40
Length = 439
Score = 359 (131.4 bits), Expect = 6.4e-35, Sum P(2) = 6.4e-35
Identities = 86/228 (37%), Positives = 130/228 (57%)
Query: 403 DFEEA-TKMVQPSSRREGFSAIPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVD 461
D ++A TK ++ + S PNVKW D+ GLD + ++ +KFP+ + G
Sbjct: 108 DNDDADTKKLRGALAGAILSEKPNVKWSDIAGLDAAKEALKEAVILPVKFPQLF--VGNR 165
Query: 462 LET-GFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRART 520
T G LLYGPPG GK+ +AKAVA EA + F + +L++K++GESE V+ LF+ AR
Sbjct: 166 KPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESERLVKQLFTMARE 225
Query: 521 CSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGA-DKRKGVFVIGATNRPDVMD 579
P I+F DEVDAL RG+ R+ +LL++++G + +GV V+GATN P +D
Sbjct: 226 NKPSIIFIDEVDALCGPRGEGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLD 285
Query: 580 RAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSV-DLHTIAQ 626
AV R RF + +Y+ LP + R + E P + + D T+A+
Sbjct: 286 AAVRR--RFERRIYIALPDVEARTRMFEINIGDVPCECTPHDYRTLAE 331
Score = 281 (104.0 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 70/176 (39%), Positives = 102/176 (57%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVR-PMAGILLYGPPGCGKTKLAHAIAN 180
++ D+ G+++ E LK VI+P+ PQL ++G R P +GILLYGPPG GK+ LA A+A
Sbjct: 133 KWSDIAGLDAAKEALKEAVILPVKFPQL--FVGNRKPTSGILLYGPPGTGKSYLAKAVAT 190
Query: 181 ETGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREM 240
E F+ +S++++VS G SE ++ LF+ A PSI+FIDE+DA+ R + E
Sbjct: 191 EANSTFFSVSSSDLVSKWMGESERLVKQLFTMARENKPSIIFIDEVDALCGPRGEGESEA 250
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRR 296
RRI T+L+ M+ G VLV+GATN P +D A+RR
Sbjct: 251 SRRIKTELLVQMN---------------GVGNDSQG-VLVLGATNIPWQLDAAVRR 290
Score = 101 (40.6 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 43/168 (25%), Positives = 78/168 (46%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGS-FDLVKI 336
VLV+GATN P +D A+RR RF+R I + +PD AR ++ + ++ E + D +
Sbjct: 272 VLVLGATNIPWQLDAAVRR--RFERRIYIALPDVEARTRMFEINIGDVPCECTPHDYRTL 329
Query: 337 ARSTPGFVXXXXXXXXXXXXXXXMKRI---------IDQR--KSELSGNSIAEQHSDDWW 385
A T G+ +++I ID+ K +L+ S ++ + +
Sbjct: 330 AEMTDGYSGHDVAVVVRDALMQPIRKIQQATHFKPVIDETDGKEKLTPCSPGDEGAREMN 389
Query: 386 RQPWLPEEMERLTITMTDFEEATKMVQPSSRREGFSAIPNVKW-EDVG 432
+E++ +T+ DF +A K +P+ + +VK+ ED G
Sbjct: 390 WMDLATDELKEPPLTIKDFIKAIKNNRPTVNEADIAQ--HVKFTEDFG 435
Score = 46 (21.3 bits), Expect = 6.4e-35, Sum P(2) = 6.4e-35
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 665 PFTIKLTHFEQALSKISPSVSELQIQRYKTLSETF 699
P TIK F +A+ P+V+E I ++ +E F
Sbjct: 402 PLTIK--DFIKAIKNNRPTVNEADIAQHVKFTEDF 434
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 382 (139.5 bits), Expect = 7.1e-35, P = 7.1e-35
Identities = 86/215 (40%), Positives = 122/215 (56%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P + D+GGLD E + + PE YEE G+ G +LYG PG GKTL+AKAV
Sbjct: 180 PQETYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAV 239
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
AN+ A F+ + G EL+ KY+G+ VR LF A +P I+F DE+DA+ TKR
Sbjct: 240 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNS 299
Query: 542 GGW-VVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
GG ++R + +LL +LDG D R V VI ATNR + +D A++RPGR + + PLP
Sbjct: 300 GGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK 359
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
+ I + + + D V L + +K ++LSG
Sbjct: 360 TKRRIFQIHTSRMTVADDVTLDDLILAK--DDLSG 392
Score = 350 (128.3 bits), Expect = 2.5e-31, P = 2.5e-31
Identities = 79/205 (38%), Positives = 119/205 (58%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG++S ++E+K V +PL HP+ + +G++P G++LYG PG GKT LA A+AN+T
Sbjct: 184 YADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQT 243
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F ++ +E++ G + +R+LF A APSIVFIDEIDAI +KR + ER
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 243 RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDR 302
I ++ +++ G G V VI ATNR + +DPAL RPGR DR
Sbjct: 304 EIQRTMLELLNQLD-----GFDSR---------GDVKVIMATNRIETLDPALIRPGRIDR 349
Query: 303 EIVLGVPDENARVQILSVLTRNLRV 327
+I +PDE + +I + T + V
Sbjct: 350 KIEFPLPDEKTKRRIFQIHTSRMTV 374
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 382 (139.5 bits), Expect = 7.1e-35, P = 7.1e-35
Identities = 84/206 (40%), Positives = 123/206 (59%)
Query: 423 IPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKA 482
+P+ +E VGGLD E I +K PE ++ G+ G LLYGPPG GKTL+A+A
Sbjct: 137 VPDSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARA 196
Query: 483 VANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEG 542
VA+ FI + G EL+ K++GE VR LF AR +P I+F DE+D++ + R + G
Sbjct: 197 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLETG 256
Query: 543 GW--VVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
V+R + +LL +LDG + K + VI ATNR DV+D+A+LRPGR + + P P +
Sbjct: 257 TGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEE 316
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQ 626
R IL+ +RK + ++L IA+
Sbjct: 317 ARLDILKIHSRKMNLTRGINLRKIAE 342
Score = 341 (125.1 bits), Expect = 2.5e-30, P = 2.5e-30
Identities = 83/222 (37%), Positives = 124/222 (55%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++ +GG++ ++E+K + +P+ HP+L LG+ G+LLYGPPG GKT LA A+A+ T
Sbjct: 142 YEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHHT 201
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR-ENLQREME 241
F ++S +E+V G +R+LF A APSI+F+DEID+I S R E + E
Sbjct: 202 ECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLETGTGDSE 261
Query: 242 -RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRF 300
+R + +L+ +D G + VI ATNR D +D AL RPGR
Sbjct: 262 VQRTMLELLNQLD--------GFEATKN---------IKVIMATNRIDVLDQALLRPGRI 304
Query: 301 DREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPG 342
DR+I P+E AR+ IL + +R + + +L KIA PG
Sbjct: 305 DRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAEEMPG 346
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 382 (139.5 bits), Expect = 7.1e-35, P = 7.1e-35
Identities = 84/215 (39%), Positives = 121/215 (56%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+V + DVGG + + + PE++ G++ G LL+GPPG GKTL A+AV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---GK 540
AN A FI + G EL+ KYVGE VR LF AR+ C++FFDE+DA+ R G
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGARFDDGA 289
Query: 541 EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R + +L+ +LDG D R + V+ ATNRPD +D A++RPGR + + LP D
Sbjct: 290 GGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDQD 349
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
R I + AR ++ + +A + C N +G
Sbjct: 350 GRSHIFKIHARSMSVERDIRFDLLA--RLCPNSTG 382
Score = 323 (118.8 bits), Expect = 2.3e-28, P = 2.3e-28
Identities = 81/224 (36%), Positives = 119/224 (53%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG + +E+L+ V PL HP+ LG+ P G+LL+GPPG GKT A A+AN T
Sbjct: 174 YSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRT 233
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR--ENLQREM 240
F ++ +E+V G +R+LF A ++F DEIDAI R + +
Sbjct: 234 DACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGARFDDGAGGDN 293
Query: 241 E-RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
E +R + +L+ +D P G + V+ ATNRPD +DPAL RPGR
Sbjct: 294 EVQRTMLELINQLDG----FDPR-------------GNIKVLMATNRPDTLDPALMRPGR 336
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGS--FDLVKIARSTP 341
DR++ G+PD++ R I + R++ VE FDL +AR P
Sbjct: 337 LDRKVEFGLPDQDGRSHIFKIHARSMSVERDIRFDL--LARLCP 378
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 401 (146.2 bits), Expect = 7.1e-35, P = 7.1e-35
Identities = 92/220 (41%), Positives = 126/220 (57%)
Query: 411 VQPSSRREGFSAIPN--VKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLL 468
+Q + F PN V ++DV G+D + +F +V +K PE + G + G LL
Sbjct: 200 LQIGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFME-VVEFLKKPERFTAVGARIPKGVLL 258
Query: 469 YGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFF 528
GPPG GKTL+AKA+A EAG F I G E + +VG VR LF +A+ +PCI+F
Sbjct: 259 VGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFV 318
Query: 529 DEVDALTTKRGKE-GGWVVER--LLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRP 585
DE+DA+ +RG GG ER LNQLL E+DG + GV V+ ATNR D++D A+LRP
Sbjct: 319 DEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRP 378
Query: 586 GRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 625
GRF + + V +P R IL+ + K + V L IA
Sbjct: 379 GRFDRQVSVDVPDVKGRTDILKVHSGNKKFESGVSLEVIA 418
Score = 360 (131.8 bits), Expect = 3.9e-30, P = 3.9e-30
Identities = 94/227 (41%), Positives = 121/227 (53%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
F D+ G++ ++ MEV+ L P+ +G R G+LL GPPG GKT LA AIA E
Sbjct: 219 FDDVAGVDEAKQDF-MEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 277
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE------NL 236
GVPF+ IS +E V G +RDLF KA AP IVF+DEIDA+ +R N
Sbjct: 278 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGND 337
Query: 237 QREMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRR 296
+RE + + QL+T MD G V+V+ ATNR D +D AL R
Sbjct: 338 ERE---QTLNQLLTEMD--------GFEGNTG---------VIVVAATNRADILDSALLR 377
Query: 297 PGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
PGRFDR++ + VPD R IL V + N + E L IA TPGF
Sbjct: 378 PGRFDRQVSVDVPDVKGRTDILKVHSGNKKFESGVSLEVIAMRTPGF 424
>UNIPROTKB|E1BFQ0 [details] [associations]
symbol:E1BFQ0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042407 "cristae formation" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 OMA:WDEKDFR GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:DAAA02046282 IPI:IPI00707325 Ensembl:ENSBTAT00000056979
Uniprot:E1BFQ0
Length = 802
Score = 403 (146.9 bits), Expect = 7.6e-35, P = 7.6e-35
Identities = 96/258 (37%), Positives = 140/258 (54%)
Query: 426 VKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVAN 485
V++ DV G + + E + V +K P++Y++ G + G LL GPPG GKTL+AKA A
Sbjct: 300 VRFADVAGCEEAKLEIMEF-VNFLKNPKQYQDLGAKIPKGALLTGPPGTGKTLLAKATAG 358
Query: 486 EAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE--GG 543
EAG FI + G E L +VG VR +F+ AR +PCILF DE+DA+ KRG+ GG
Sbjct: 359 EAGVPFITVNGSEFLEMFVGVGPARVRDMFALARKNAPCILFVDEIDAIGRKRGRGHFGG 418
Query: 544 WVV-ERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDER 602
E LNQLL+E+DG + V V+ TNRPDV+D A++RPGRF + +Y+ P R
Sbjct: 419 QSEQENTLNQLLVEMDGFNSTTNVVVLAGTNRPDVLDPALMRPGRFDRQIYIGPPDIKGR 478
Query: 603 GLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSD 662
I R +D+S+ +A+ K G LI+++
Sbjct: 479 SSIFRVHLRPLKLDESLSKDALAR-KLAALTPGFTGSGADISNVCNEAA--LIAARH--- 532
Query: 663 VTPFTIKLTHFEQALSKI 680
+ P ++ HFEQA+ ++
Sbjct: 533 LNP-SVGEKHFEQAIERV 549
Score = 339 (124.4 bits), Expect = 1.4e-27, P = 1.4e-27
Identities = 93/230 (40%), Positives = 121/230 (52%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
RF D+ G E E+ ME + L +P+ Q LG + G LL GPPG GKT LA A A E
Sbjct: 301 RFADVAGCEEAKLEI-MEFVNFLKNPKQYQDLGAKIPKGALLTGPPGTGKTLLAKATAGE 359
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENL----Q 237
GVPF ++ +E + G +RD+F+ A + AP I+F+DEIDAI KR Q
Sbjct: 360 AGVPFITVNGSEFLEMFVGVGPARVRDMFALARKNAPCILFVDEIDAIGRKRGRGHFGGQ 419
Query: 238 REMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRP 297
E E + QL+ MD G V+V+ TNRPD +DPAL RP
Sbjct: 420 SEQENTL-NQLLVEMD--------GFNSTTN---------VVVLAGTNRPDVLDPALMRP 461
Query: 298 GRFDREIVLGVPDENARVQILSVLTRNLRVEGSF--DLV--KIARSTPGF 343
GRFDR+I +G PD R I V R L+++ S D + K+A TPGF
Sbjct: 462 GRFDRQIYIGPPDIKGRSSIFRVHLRPLKLDESLSKDALARKLAALTPGF 511
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 381 (139.2 bits), Expect = 9.2e-35, P = 9.2e-35
Identities = 84/207 (40%), Positives = 121/207 (58%)
Query: 423 IPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKA 482
+P+ +E VGGLD E I +K PE ++ G+ G LLYGPPG GKTL+A+A
Sbjct: 169 VPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 228
Query: 483 VANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GK 540
VA+ FI + G EL+ K++GE VR LF AR +P I+F DE+D++ + R G
Sbjct: 229 VAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGS 288
Query: 541 EGG-WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTP 599
GG V+R + +LL +LDG + K + VI ATNR D++D A+LRPGR + + P P
Sbjct: 289 RGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPAPDE 348
Query: 600 DERGLILEALARKKPIDDSVDLHTIAQ 626
R IL+ +RK + + + IA+
Sbjct: 349 KARAQILKIHSRKMNLMRGIRMDKIAE 375
Score = 345 (126.5 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 80/220 (36%), Positives = 121/220 (55%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++ +GG+++ ++E+K + +P+ HP+L LG+ G+LLYGPPG GKT LA A+A+ T
Sbjct: 174 YEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 233
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F ++S +E+V G +R+LF A APSI+F+DEID+I S R R +
Sbjct: 234 ECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSRGGDS 293
Query: 243 RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDR 302
+ ++ +++ G + VI ATNR D +D AL RPGR DR
Sbjct: 294 EVQRTMLELLNQLD-----GFEATKN---------IKVIMATNRIDILDSALLRPGRIDR 339
Query: 303 EIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPG 342
+I PDE AR QIL + +R + + + KIA PG
Sbjct: 340 KIEFPAPDEKARAQILKIHSRKMNLMRGIRMDKIAEQIPG 379
Score = 39 (18.8 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 396 RLTITMTDFEEAT-KMVQPSSRR 417
R+ +T DFE A K++Q S +
Sbjct: 401 RIHVTQEDFEMAVGKVMQKDSEK 423
>SGD|S000006377 [details] [associations]
symbol:VPS4 "AAA-ATPase involved in multivesicular body (MVB)
protein sorting" species:4932 "Saccharomyces cerevisiae"
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0045053 "protein retention in Golgi apparatus" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA;IMP;IDA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0070676 "intralumenal vesicle formation"
evidence=IMP] [GO:0045324 "late endosome to vacuole transport"
evidence=IMP;IPI] [GO:0016887 "ATPase activity" evidence=IMP;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005768
"endosome" evidence=IEA;IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0032511 "late
endosome to vacuole transport via multivesicular body sorting
pathway" evidence=IMP] [GO:0016125 "sterol metabolic process"
evidence=IGI;IMP] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0051260 "protein
homooligomerization" evidence=IDA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000006377
GO:GO:0005783 GO:GO:0005524 GO:GO:0042803 GO:GO:0016020
GO:GO:0015031 GO:GO:0005768 GO:GO:0051260 GO:GO:0016887
GO:GO:0010008 EMBL:BK006949 Pfam:PF04212 eggNOG:COG0464
InterPro:IPR015415 Pfam:PF09336 GO:GO:0016125 EMBL:U25842
SMART:SM00745 GO:GO:0032511 GO:GO:0045053 PDB:2V6X PDBsum:2V6X
GO:GO:0070676 GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146
KO:K12196 OMA:AKCAEYL OrthoDB:EOG4V1B8K EMBL:X92680 PIR:S59831
RefSeq:NP_015499.1 PDB:2QP9 PDB:2QPA PDB:2RKO PDB:3EIE PDB:3EIH
PDB:3MHV PDBsum:2QP9 PDBsum:2QPA PDBsum:2RKO PDBsum:3EIE
PDBsum:3EIH PDBsum:3MHV ProteinModelPortal:P52917 SMR:P52917
DIP:DIP-1746N IntAct:P52917 MINT:MINT-389240 STRING:P52917
PaxDb:P52917 PeptideAtlas:P52917 EnsemblFungi:YPR173C GeneID:856303
KEGG:sce:YPR173C CYGD:YPR173c EvolutionaryTrace:P52917
NextBio:981664 Genevestigator:P52917 GermOnline:YPR173C
Uniprot:P52917
Length = 437
Score = 364 (133.2 bits), Expect = 9.2e-35, Sum P(2) = 9.2e-35
Identities = 79/186 (42%), Positives = 114/186 (61%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLET-GFLLYGPPGCGKTLIAKA 482
PNVKWEDV GL+ + ++ +KFP ++ G T G LLYGPPG GK+ +AKA
Sbjct: 128 PNVKWEDVAGLEGAKEALKEAVILPVKFPHLFK--GNRKPTSGILLYGPPGTGKSYLAKA 185
Query: 483 VANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEG 542
VA EA + F + +L++K++GESE V+ LF+ AR P I+F DEVDALT RG+
Sbjct: 186 VATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDALTGTRGEGE 245
Query: 543 GWVVERLLNQLLIELDGA-DKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDE 601
R+ +LL++++G + +GV V+GATN P +D A+ R RF + +Y+PLP
Sbjct: 246 SEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRR--RFERRIYIPLPDLAA 303
Query: 602 RGLILE 607
R + E
Sbjct: 304 RTTMFE 309
Score = 278 (102.9 bits), Expect = 3.0e-22, Sum P(3) = 3.0e-22
Identities = 70/176 (39%), Positives = 101/176 (57%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVR-PMAGILLYGPPGCGKTKLAHAIAN 180
+++D+ G+E E LK VI+P+ P L + G R P +GILLYGPPG GK+ LA A+A
Sbjct: 131 KWEDVAGLEGAKEALKEAVILPVKFPHL--FKGNRKPTSGILLYGPPGTGKSYLAKAVAT 188
Query: 181 ETGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREM 240
E F+ +S++++VS G SE+ ++ LF+ A PSI+FIDE+DA+ R + E
Sbjct: 189 EANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDALTGTRGEGESEA 248
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRR 296
RRI T+L+ M+ G VLV+GATN P +D A+RR
Sbjct: 249 SRRIKTELLVQMN---------------GVGNDSQG-VLVLGATNIPWQLDSAIRR 288
Score = 39 (18.8 bits), Expect = 9.2e-35, Sum P(2) = 9.2e-35
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 77 IEFEVMPRKIDLVNAKSREVEMKKEE 102
+++E P+ DL+ AK E + E+
Sbjct: 44 LKYEKNPKSKDLIRAKFTEYLNRAEQ 69
Score = 39 (18.8 bits), Expect = 3.0e-22, Sum P(3) = 3.0e-22
Identities = 7/23 (30%), Positives = 15/23 (65%)
Query: 392 EEMERLTITMTDFEEATKMVQPS 414
+E++ +T+ DF +A K +P+
Sbjct: 394 DELKEPDLTIKDFLKAIKSTRPT 416
>ZFIN|ZDB-GENE-070912-46 [details] [associations]
symbol:afg3l2 "AFG3 ATPase family gene 3-like 2 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070912-46 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:10939 MEROPS:M41.007 EMBL:BX000484 EMBL:BC155655
IPI:IPI00513225 RefSeq:NP_001104667.1 UniGene:Dr.82691 SMR:A9JRG9
STRING:A9JRG9 Ensembl:ENSDART00000089834 GeneID:569168
KEGG:dre:569168 NextBio:20889547 Uniprot:A9JRG9
Length = 800
Score = 402 (146.6 bits), Expect = 9.9e-35, P = 9.9e-35
Identities = 98/279 (35%), Positives = 148/279 (53%)
Query: 425 NVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVA 484
+VK++DV G + + E + V +K P++Y++ G + G +L GPPG GKTL+AKA A
Sbjct: 299 DVKFKDVAGCEEAKLEIMEF-VNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATA 357
Query: 485 NEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE--G 542
EA FI + G E L +VG VR LF AR +PCILF DE+DA+ KRG+ G
Sbjct: 358 GEANVPFITVNGSEFLEMFVGVGPARVRDLFVLARKNAPCILFIDEIDAVGRKRGRGNFG 417
Query: 543 GWVV-ERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDE 601
G E LNQLL+E+DG + V V+ TNRPD++D A++RPGRF + +Y+ P
Sbjct: 418 GQSEQENTLNQLLVEMDGFNTATNVVVLAGTNRPDILDPALMRPGRFDRQIYIGPPDIKG 477
Query: 602 RGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSS 661
R I + R ++ +D +A+ ++ LI+++ S
Sbjct: 478 RASIFKVHLRPLKLEAELDKEALARK-----MAALTPGFSGADIANVCNEAALIAARHLS 532
Query: 662 DVTPFTIKLTHFEQALSKISPSVSE----LQIQRYKTLS 696
D I HFEQA+ ++ + + LQ + KT++
Sbjct: 533 DA----INQKHFEQAIERVIGGLEKKTQVLQPEEKKTVA 567
Score = 340 (124.7 bits), Expect = 1.1e-27, P = 1.1e-27
Identities = 92/230 (40%), Positives = 119/230 (51%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
+F+D+ G E E+ ME + L +P+ Q LG + G +L GPPG GKT LA A A E
Sbjct: 301 KFKDVAGCEEAKLEI-MEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGE 359
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE--NL--Q 237
VPF ++ +E + G +RDLF A + AP I+FIDEIDA+ KR N Q
Sbjct: 360 ANVPFITVNGSEFLEMFVGVGPARVRDLFVLARKNAPCILFIDEIDAVGRKRGRGNFGGQ 419
Query: 238 REMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRP 297
E E + QL+ MD G V+V+ TNRPD +DPAL RP
Sbjct: 420 SEQENTL-NQLLVEMD--------GFNTATN---------VVVLAGTNRPDILDPALMRP 461
Query: 298 GRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARS----TPGF 343
GRFDR+I +G PD R I V R L++E D +AR TPGF
Sbjct: 462 GRFDRQIYIGPPDIKGRASIFKVHLRPLKLEAELDKEALARKMAALTPGF 511
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 380 (138.8 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 84/215 (39%), Positives = 120/215 (55%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+V + DVGG + + + PE + G++ G LL+GPPG GKTL A+AV
Sbjct: 161 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 220
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---GK 540
AN A FI + G EL+ KYVGE VR LF ART C++FFDE+DA+ R G
Sbjct: 221 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 280
Query: 541 EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R + +L+ +LDG D R + V+ ATNRPD +D A++RPGR + + LP +
Sbjct: 281 GGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLE 340
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
R I + AR ++ + +A + C N +G
Sbjct: 341 GRTHIFKIHARSMSVERDIRFELLA--RLCPNSTG 373
Score = 314 (115.6 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 78/222 (35%), Positives = 113/222 (50%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG + +E+L+ V PL HP+ LG+ P G+LL+GPPG GKT A A+AN T
Sbjct: 165 YSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRT 224
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR--ENLQREM 240
F ++ +E+V G +R+LF A ++F DEIDAI R + +
Sbjct: 225 DACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDN 284
Query: 241 E-RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
E +R + +L+ +D P G + V+ ATNRPD +DPAL RPGR
Sbjct: 285 EVQRTMLELINQLDG----FDPR-------------GNIKVLMATNRPDTLDPALMRPGR 327
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTP 341
DR+I +PD R I + R++ VE +AR P
Sbjct: 328 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCP 369
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 380 (138.8 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 84/215 (39%), Positives = 120/215 (55%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+V + DVGG + + + PE + G++ G LL+GPPG GKTL A+AV
Sbjct: 169 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 228
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---GK 540
AN A FI + G EL+ KYVGE VR LF ART C++FFDE+DA+ R G
Sbjct: 229 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 288
Query: 541 EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R + +L+ +LDG D R + V+ ATNRPD +D A++RPGR + + LP +
Sbjct: 289 GGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLE 348
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
R I + AR ++ + +A + C N +G
Sbjct: 349 GRTHIFKIHARSMSVERDIRFELLA--RLCPNSTG 381
Score = 314 (115.6 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 78/222 (35%), Positives = 113/222 (50%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG + +E+L+ V PL HP+ LG+ P G+LL+GPPG GKT A A+AN T
Sbjct: 173 YSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRT 232
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR--ENLQREM 240
F ++ +E+V G +R+LF A ++F DEIDAI R + +
Sbjct: 233 DACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDN 292
Query: 241 E-RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
E +R + +L+ +D P G + V+ ATNRPD +DPAL RPGR
Sbjct: 293 EVQRTMLELINQLDG----FDPR-------------GNIKVLMATNRPDTLDPALMRPGR 335
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTP 341
DR+I +PD R I + R++ VE +AR P
Sbjct: 336 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCP 377
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 380 (138.8 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 84/215 (39%), Positives = 120/215 (55%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+V + DVGG + + + PE + G++ G LL+GPPG GKTL A+AV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---GK 540
AN A FI + G EL+ KYVGE VR LF ART C++FFDE+DA+ R G
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289
Query: 541 EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R + +L+ +LDG D R + V+ ATNRPD +D A++RPGR + + LP +
Sbjct: 290 GGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLE 349
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
R I + AR ++ + +A + C N +G
Sbjct: 350 GRTHIFKIHARSMSVERDIRFELLA--RLCPNSTG 382
Score = 314 (115.6 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 78/222 (35%), Positives = 113/222 (50%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG + +E+L+ V PL HP+ LG+ P G+LL+GPPG GKT A A+AN T
Sbjct: 174 YSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRT 233
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR--ENLQREM 240
F ++ +E+V G +R+LF A ++F DEIDAI R + +
Sbjct: 234 DACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDN 293
Query: 241 E-RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
E +R + +L+ +D P G + V+ ATNRPD +DPAL RPGR
Sbjct: 294 EVQRTMLELINQLDG----FDPR-------------GNIKVLMATNRPDTLDPALMRPGR 336
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTP 341
DR+I +PD R I + R++ VE +AR P
Sbjct: 337 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCP 378
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 380 (138.8 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 84/215 (39%), Positives = 120/215 (55%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+V + DVGG + + + PE + G++ G LL+GPPG GKTL A+AV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---GK 540
AN A FI + G EL+ KYVGE VR LF ART C++FFDE+DA+ R G
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289
Query: 541 EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R + +L+ +LDG D R + V+ ATNRPD +D A++RPGR + + LP +
Sbjct: 290 GGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLE 349
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
R I + AR ++ + +A + C N +G
Sbjct: 350 GRTHIFKIHARSMSVERDIRFELLA--RLCPNSTG 382
Score = 314 (115.6 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 78/222 (35%), Positives = 113/222 (50%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG + +E+L+ V PL HP+ LG+ P G+LL+GPPG GKT A A+AN T
Sbjct: 174 YSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRT 233
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR--ENLQREM 240
F ++ +E+V G +R+LF A ++F DEIDAI R + +
Sbjct: 234 DACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDN 293
Query: 241 E-RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
E +R + +L+ +D P G + V+ ATNRPD +DPAL RPGR
Sbjct: 294 EVQRTMLELINQLDG----FDPR-------------GNIKVLMATNRPDTLDPALMRPGR 336
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTP 341
DR+I +PD R I + R++ VE +AR P
Sbjct: 337 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCP 378
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 380 (138.8 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 84/215 (39%), Positives = 120/215 (55%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+V + DVGG + + + PE + G++ G LL+GPPG GKTL A+AV
Sbjct: 33 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 92
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---GK 540
AN A FI + G EL+ KYVGE VR LF ART C++FFDE+DA+ R G
Sbjct: 93 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 152
Query: 541 EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R + +L+ +LDG D R + V+ ATNRPD +D A++RPGR + + LP +
Sbjct: 153 GGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLE 212
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
R I + AR ++ + +A + C N +G
Sbjct: 213 GRTHIFKIHARSMSVERDIRFELLA--RLCPNSTG 245
Score = 314 (115.6 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 78/222 (35%), Positives = 113/222 (50%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG + +E+L+ V PL HP+ LG+ P G+LL+GPPG GKT A A+AN T
Sbjct: 37 YSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRT 96
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR--ENLQREM 240
F ++ +E+V G +R+LF A ++F DEIDAI R + +
Sbjct: 97 DACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDN 156
Query: 241 E-RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
E +R + +L+ +D P G + V+ ATNRPD +DPAL RPGR
Sbjct: 157 EVQRTMLELINQLDG----FDPR-------------GNIKVLMATNRPDTLDPALMRPGR 199
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTP 341
DR+I +PD R I + R++ VE +AR P
Sbjct: 200 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCP 241
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 380 (138.8 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 84/215 (39%), Positives = 120/215 (55%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+V + DVGG + + + PE + G++ G LL+GPPG GKTL A+AV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---GK 540
AN A FI + G EL+ KYVGE VR LF ART C++FFDE+DA+ R G
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289
Query: 541 EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R + +L+ +LDG D R + V+ ATNRPD +D A++RPGR + + LP +
Sbjct: 290 GGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLE 349
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
R I + AR ++ + +A + C N +G
Sbjct: 350 GRTHIFKIHARSMSVERDIRFELLA--RLCPNSTG 382
Score = 314 (115.6 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 78/222 (35%), Positives = 113/222 (50%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG + +E+L+ V PL HP+ LG+ P G+LL+GPPG GKT A A+AN T
Sbjct: 174 YSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRT 233
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR--ENLQREM 240
F ++ +E+V G +R+LF A ++F DEIDAI R + +
Sbjct: 234 DACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDN 293
Query: 241 E-RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
E +R + +L+ +D P G + V+ ATNRPD +DPAL RPGR
Sbjct: 294 EVQRTMLELINQLDG----FDPR-------------GNIKVLMATNRPDTLDPALMRPGR 336
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTP 341
DR+I +PD R I + R++ VE +AR P
Sbjct: 337 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCP 378
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 380 (138.8 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 84/215 (39%), Positives = 120/215 (55%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+V + DVGG + + + PE + G++ G LL+GPPG GKTL A+AV
Sbjct: 212 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 271
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---GK 540
AN A FI + G EL+ KYVGE VR LF ART C++FFDE+DA+ R G
Sbjct: 272 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 331
Query: 541 EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R + +L+ +LDG D R + V+ ATNRPD +D A++RPGR + + LP +
Sbjct: 332 GGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLE 391
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
R I + AR ++ + +A + C N +G
Sbjct: 392 GRTHIFKIHARSMSVERDIRFELLA--RLCPNSTG 424
Score = 314 (115.6 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 78/222 (35%), Positives = 113/222 (50%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG + +E+L+ V PL HP+ LG+ P G+LL+GPPG GKT A A+AN T
Sbjct: 216 YSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRT 275
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR--ENLQREM 240
F ++ +E+V G +R+LF A ++F DEIDAI R + +
Sbjct: 276 DACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDN 335
Query: 241 E-RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
E +R + +L+ +D P G + V+ ATNRPD +DPAL RPGR
Sbjct: 336 EVQRTMLELINQLDG----FDPR-------------GNIKVLMATNRPDTLDPALMRPGR 378
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTP 341
DR+I +PD R I + R++ VE +AR P
Sbjct: 379 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCP 420
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 380 (138.8 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 84/215 (39%), Positives = 120/215 (55%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+V + DVGG + + + PE + G++ G LL+GPPG GKTL A+AV
Sbjct: 171 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 230
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---GK 540
AN A FI + G EL+ KYVGE VR LF ART C++FFDE+DA+ R G
Sbjct: 231 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 290
Query: 541 EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R + +L+ +LDG D R + V+ ATNRPD +D A++RPGR + + LP +
Sbjct: 291 GGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLE 350
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
R I + AR ++ + +A + C N +G
Sbjct: 351 GRTHIFKIHARSMSVERDIRFELLA--RLCPNSTG 383
Score = 314 (115.6 bits), Expect = 1.8e-26, P = 1.8e-26
Identities = 78/222 (35%), Positives = 113/222 (50%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG + +E+L+ V PL HP+ LG+ P G+LL+GPPG GKT A A+AN T
Sbjct: 175 YSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRT 234
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR--ENLQREM 240
F ++ +E+V G +R+LF A ++F DEIDAI R + +
Sbjct: 235 DACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDN 294
Query: 241 E-RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
E +R + +L+ +D P G + V+ ATNRPD +DPAL RPGR
Sbjct: 295 EVQRTMLELINQLDG----FDPR-------------GNIKVLMATNRPDTLDPALMRPGR 337
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTP 341
DR+I +PD R I + R++ VE +AR P
Sbjct: 338 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCP 379
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 380 (138.8 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 84/215 (39%), Positives = 120/215 (55%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+V + DVGG + + + PE + G++ G LL+GPPG GKTL A+AV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---GK 540
AN A FI + G EL+ KYVGE VR LF ART C++FFDE+DA+ R G
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289
Query: 541 EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R + +L+ +LDG D R + V+ ATNRPD +D A++RPGR + + LP +
Sbjct: 290 GGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLE 349
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
R I + AR ++ + +A + C N +G
Sbjct: 350 GRTHIFKIHARSMSVERDIRFELLA--RLCPNSTG 382
Score = 314 (115.6 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 78/222 (35%), Positives = 113/222 (50%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG + +E+L+ V PL HP+ LG+ P G+LL+GPPG GKT A A+AN T
Sbjct: 174 YSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRT 233
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR--ENLQREM 240
F ++ +E+V G +R+LF A ++F DEIDAI R + +
Sbjct: 234 DACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDN 293
Query: 241 E-RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
E +R + +L+ +D P G + V+ ATNRPD +DPAL RPGR
Sbjct: 294 EVQRTMLELINQLDG----FDPR-------------GNIKVLMATNRPDTLDPALMRPGR 336
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTP 341
DR+I +PD R I + R++ VE +AR P
Sbjct: 337 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCP 378
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 380 (138.8 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 84/215 (39%), Positives = 120/215 (55%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+V + DVGG + + + PE + G++ G LL+GPPG GKTL A+AV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---GK 540
AN A FI + G EL+ KYVGE VR LF ART C++FFDE+DA+ R G
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289
Query: 541 EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R + +L+ +LDG D R + V+ ATNRPD +D A++RPGR + + LP +
Sbjct: 290 GGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLE 349
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
R I + AR ++ + +A + C N +G
Sbjct: 350 GRTHIFKIHARSMSVERDIRFELLA--RLCPNSTG 382
Score = 314 (115.6 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 78/222 (35%), Positives = 113/222 (50%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG + +E+L+ V PL HP+ LG+ P G+LL+GPPG GKT A A+AN T
Sbjct: 174 YSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRT 233
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR--ENLQREM 240
F ++ +E+V G +R+LF A ++F DEIDAI R + +
Sbjct: 234 DACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDN 293
Query: 241 E-RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
E +R + +L+ +D P G + V+ ATNRPD +DPAL RPGR
Sbjct: 294 EVQRTMLELINQLDG----FDPR-------------GNIKVLMATNRPDTLDPALMRPGR 336
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTP 341
DR+I +PD R I + R++ VE +AR P
Sbjct: 337 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCP 378
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 380 (138.8 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 84/215 (39%), Positives = 120/215 (55%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+V + DVGG + + + PE + G++ G LL+GPPG GKTL A+AV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---GK 540
AN A FI + G EL+ KYVGE VR LF ART C++FFDE+DA+ R G
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289
Query: 541 EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R + +L+ +LDG D R + V+ ATNRPD +D A++RPGR + + LP +
Sbjct: 290 GGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLE 349
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
R I + AR ++ + +A + C N +G
Sbjct: 350 GRTHIFKIHARSMSVERDIRFELLA--RLCPNSTG 382
Score = 314 (115.6 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 78/222 (35%), Positives = 113/222 (50%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG + +E+L+ V PL HP+ LG+ P G+LL+GPPG GKT A A+AN T
Sbjct: 174 YSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRT 233
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR--ENLQREM 240
F ++ +E+V G +R+LF A ++F DEIDAI R + +
Sbjct: 234 DACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDN 293
Query: 241 E-RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
E +R + +L+ +D P G + V+ ATNRPD +DPAL RPGR
Sbjct: 294 EVQRTMLELINQLDG----FDPR-------------GNIKVLMATNRPDTLDPALMRPGR 336
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTP 341
DR+I +PD R I + R++ VE +AR P
Sbjct: 337 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCP 378
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 380 (138.8 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 84/215 (39%), Positives = 120/215 (55%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+V + DVGG + + + PE + G++ G LL+GPPG GKTL A+AV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---GK 540
AN A FI + G EL+ KYVGE VR LF ART C++FFDE+DA+ R G
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289
Query: 541 EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R + +L+ +LDG D R + V+ ATNRPD +D A++RPGR + + LP +
Sbjct: 290 GGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLE 349
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
R I + AR ++ + +A + C N +G
Sbjct: 350 GRTHIFKIHARSMSVERDIRFELLA--RLCPNSTG 382
Score = 314 (115.6 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 78/222 (35%), Positives = 113/222 (50%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG + +E+L+ V PL HP+ LG+ P G+LL+GPPG GKT A A+AN T
Sbjct: 174 YSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRT 233
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR--ENLQREM 240
F ++ +E+V G +R+LF A ++F DEIDAI R + +
Sbjct: 234 DACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDN 293
Query: 241 E-RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
E +R + +L+ +D P G + V+ ATNRPD +DPAL RPGR
Sbjct: 294 EVQRTMLELINQLDG----FDPR-------------GNIKVLMATNRPDTLDPALMRPGR 336
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTP 341
DR+I +PD R I + R++ VE +AR P
Sbjct: 337 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCP 378
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 398 (145.2 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 87/204 (42%), Positives = 124/204 (60%)
Query: 426 VKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVAN 485
V ++DV G+D + E + +V ++ P +++ G + G LL GPPG GKTL+AKAVA
Sbjct: 153 VTFDDVAGVDEAKEEV-KELVEFLRDPGKFQRLGGKMPCGVLLVGPPGTGKTLLAKAVAG 211
Query: 486 EAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE-GGW 544
EA F I G + + +VG VR +F +A+ +PCI+F DE+DA+ RG GG
Sbjct: 212 EAKVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKQAPCIIFIDEIDAVGRHRGAGLGGG 271
Query: 545 VVER--LLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDER 602
ER LNQLL+E+DG + ++G+ V+ ATNRPDV+D A+LRPGRF + + VPLP R
Sbjct: 272 HDEREQTLNQLLVEMDGFEGKEGIIVMAATNRPDVLDPALLRPGRFDRQVVVPLPDIKGR 331
Query: 603 GLILEALARKKPIDDSVDLHTIAQ 626
IL+ K P+ V IA+
Sbjct: 332 EYILKVHMNKLPLAKDVKASVIAR 355
Score = 343 (125.8 bits), Expect = 2.7e-28, P = 2.7e-28
Identities = 90/224 (40%), Positives = 120/224 (53%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
F D+ G++ EE+K E++ L P Q LG + G+LL GPPG GKT LA A+A E
Sbjct: 155 FDDVAGVDEAKEEVK-ELVEFLRDPGKFQRLGGKMPCGVLLVGPPGTGKTLLAKAVAGEA 213
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR-ENLQREME 241
VPF+ IS ++ V G +RD+F +A + AP I+FIDEIDA+ R L +
Sbjct: 214 KVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKQAPCIIFIDEIDAVGRHRGAGLGGGHD 273
Query: 242 RRIVT--QLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
R T QL+ MD + G ++V+ ATNRPD +DPAL RPGR
Sbjct: 274 EREQTLNQLLVEMDGFEG--KEG---------------IIVMAATNRPDVLDPALLRPGR 316
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
FDR++V+ +PD R IL V L + IAR TPGF
Sbjct: 317 FDRQVVVPLPDIKGREYILKVHMNKLPLAKDVKASVIARGTPGF 360
>DICTYBASE|DDB_G0267492 [details] [associations]
symbol:DDB_G0267492 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0267492 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
EMBL:AAFI02000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 RefSeq:XP_647076.1
ProteinModelPortal:Q55GV8 SMR:Q55GV8 MEROPS:M41.A18
EnsemblProtists:DDB0189322 GeneID:8615880 KEGG:ddi:DDB_G0267492
OMA:RINENNQ Uniprot:Q55GV8
Length = 720
Score = 399 (145.5 bits), Expect = 1.5e-34, P = 1.5e-34
Identities = 88/204 (43%), Positives = 120/204 (58%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
PN + DV G + + E +V ++ PE+Y + + G LL GPPG GKTL+AK++
Sbjct: 159 PNTTFADVMGAEEAKGELQD-LVDFLRNPEKYYRRNIVMPKGILLVGPPGTGKTLLAKSL 217
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGG 543
A EA +FI I G E +VG VR LF AR SPCI+F DE+D++ R K
Sbjct: 218 AGEARVSFITINGSEFEEAFVGVGAKRVRELFEAARKNSPCIVFIDEIDSVGGSRTKRVN 277
Query: 544 WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERG 603
+ LNQLL+ELDG D R+GV V+ ATN D +D A++R GRF +++ VPLP R
Sbjct: 278 YHPSEALNQLLVELDGFDGREGVMVMAATNYQDSLDTALIRSGRFDRIIQVPLPDGKARK 337
Query: 604 LILEALARKKPIDDSVDLHTIAQS 627
I++ + KPI V+ TIAQS
Sbjct: 338 SIIDHYLKDKPIASHVNTTTIAQS 361
Score = 184 (69.8 bits), Expect = 8.2e-19, Sum P(2) = 8.2e-19
Identities = 45/131 (34%), Positives = 67/131 (51%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
F D+ G E EL+ +++ L +P+ + GILL GPPG GKT LA ++A E
Sbjct: 163 FADVMGAEEAKGELQ-DLVDFLRNPEKYYRRNIVMPKGILLVGPPGTGKTLLAKSLAGEA 221
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
V F I+ +E G + +R+LF A + +P IVFIDEID++ R
Sbjct: 222 RVSFITINGSEFEEAFVGVGAKRVRELFEAARKNSPCIVFIDEIDSVGGSRTKRVNYHPS 281
Query: 243 RIVTQLMTCMD 253
+ QL+ +D
Sbjct: 282 EALNQLLVELD 292
Score = 126 (49.4 bits), Expect = 8.2e-19, Sum P(2) = 8.2e-19
Identities = 28/66 (42%), Positives = 40/66 (60%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIA 337
V+V+ ATN D++D AL R GRFDR I + +PD AR I+ ++ + + IA
Sbjct: 300 VMVMAATNYQDSLDTALIRSGRFDRIIQVPLPDGKARKSIIDHYLKDKPIASHVNTTTIA 359
Query: 338 RSTPGF 343
+STPGF
Sbjct: 360 QSTPGF 365
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 379 (138.5 bits), Expect = 1.5e-34, P = 1.5e-34
Identities = 85/215 (39%), Positives = 122/215 (56%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P + D+GGLD E + + PE YEE G+ G +LYG PG GKTL+AKAV
Sbjct: 180 PQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAV 239
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GKE 541
AN+ A F+ + G EL+ KY+G+ VR LF A +P I+F DE+DA+ TKR
Sbjct: 240 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNS 299
Query: 542 GGW-VVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
GG ++R + +LL +LDG D R V VI ATNR + +D A++RPGR + + PLP
Sbjct: 300 GGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK 359
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
+ I + + + + V L + +K ++LSG
Sbjct: 360 TKRRIFQIHTSRMTVAEDVSLDDLILAK--DDLSG 392
Score = 347 (127.2 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 78/205 (38%), Positives = 119/205 (58%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+++ ++E+K V +PL HP+ + +G++P G++LYG PG GKT LA A+AN+T
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQT 243
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F ++ +E++ G + +R+LF A APSIVFIDEIDAI +KR + ER
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 243 RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDR 302
I ++ +++ G G V VI ATNR + +DPAL RPGR DR
Sbjct: 304 EIQRTMLELLNQLD-----GFDSR---------GDVKVIMATNRIETLDPALIRPGRIDR 349
Query: 303 EIVLGVPDENARVQILSVLTRNLRV 327
+I +PDE + +I + T + V
Sbjct: 350 KIEFPLPDEKTKRRIFQIHTSRMTV 374
>TAIR|locus:2057386 [details] [associations]
symbol:ftsh4 "FTSH protease 4" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA;ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=ISS] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
GO:GO:0005743 GO:GO:0046872 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
EMBL:AC004747 GO:GO:0004176 HOGENOM:HOG000217276 EMBL:AK220842
IPI:IPI00534293 PIR:T02610 RefSeq:NP_565616.1 UniGene:At.23415
ProteinModelPortal:O80983 SMR:O80983 STRING:O80983 MEROPS:M41.004
PaxDb:O80983 PRIDE:O80983 EnsemblPlants:AT2G26140.1 GeneID:817154
KEGG:ath:AT2G26140 GeneFarm:2508 TAIR:At2g26140 InParanoid:O80983
OMA:HTEGALP PhylomeDB:O80983 ProtClustDB:CLSN2688437
Genevestigator:O80983 Uniprot:O80983
Length = 717
Score = 398 (145.2 bits), Expect = 2.0e-34, P = 2.0e-34
Identities = 83/202 (41%), Positives = 121/202 (59%)
Query: 425 NVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVA 484
+ K+ DV G+D + E + IV ++ P+ + G L G LL GPPG GKT++A+A+A
Sbjct: 223 STKFSDVKGVDEAKAELEE-IVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIA 281
Query: 485 NEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGW 544
EAG F G E +VG VR LFS A+ CSPCI+F DE+DA+ R +
Sbjct: 282 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKCSPCIIFIDEIDAIGGSRNPKDQQ 341
Query: 545 VVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGL 604
++ LNQ+L+ELDG + +G+ V+ ATN P+ +D+A++RPGRF + + VP P + R
Sbjct: 342 YMKMTLNQMLVELDGFKQNEGIIVVAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 401
Query: 605 ILEALARKKPIDDSVDLHTIAQ 626
ILE+ K + VDL IA+
Sbjct: 402 ILESHMSKVLKAEDVDLMIIAR 423
Score = 237 (88.5 bits), Expect = 1.0e-27, Sum P(2) = 1.0e-27
Identities = 52/132 (39%), Positives = 75/132 (56%)
Query: 122 RFQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANE 181
+F D+ G++ EL+ E++ L P+ LG + G+LL GPPG GKT LA AIA E
Sbjct: 225 KFSDVKGVDEAKAELE-EIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGE 283
Query: 182 TGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREME 241
GVPF+ S +E G +RDLFS A + +P I+FIDEIDAI R ++
Sbjct: 284 AGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKCSPCIIFIDEIDAIGGSRNPKDQQYM 343
Query: 242 RRIVTQLMTCMD 253
+ + Q++ +D
Sbjct: 344 KMTLNQMLVELD 355
Score = 155 (59.6 bits), Expect = 1.0e-27, Sum P(2) = 1.0e-27
Identities = 35/67 (52%), Positives = 47/67 (70%)
Query: 278 VLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARVQIL-SVLTRNLRVEGSFDLVKI 336
++V+ ATN P+++D AL RPGRFDR IV+ PD R QIL S +++ L+ E DL+ I
Sbjct: 363 IIVVAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQILESHMSKVLKAE-DVDLMII 421
Query: 337 ARSTPGF 343
AR TPGF
Sbjct: 422 ARGTPGF 428
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 378 (138.1 bits), Expect = 2.0e-34, P = 2.0e-34
Identities = 84/215 (39%), Positives = 120/215 (55%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+V + DVGG + + + PE + G++ G LL+GPPG GKTL A+AV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---GK 540
AN A FI + G EL+ KYVGE VR LF ART C++FFDE+DA+ R G
Sbjct: 230 ANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289
Query: 541 EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R + +L+ +LDG D R + V+ ATNRPD +D A++RPGR + + LP +
Sbjct: 290 GGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLE 349
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
R I + AR ++ + +A + C N +G
Sbjct: 350 GRTHIFKIHARSMSVERDIRFELLA--RLCPNSTG 382
Score = 311 (114.5 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 78/222 (35%), Positives = 112/222 (50%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG + +E+L+ V PL HP+ LG+ P G+LL+GPPG GKT A A+AN T
Sbjct: 174 YSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRT 233
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR--ENLQREM 240
F + +E+V G +R+LF A ++F DEIDAI R + +
Sbjct: 234 DACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDN 293
Query: 241 E-RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
E +R + +L+ +D P G + V+ ATNRPD +DPAL RPGR
Sbjct: 294 EVQRTMLELINQLDG----FDPR-------------GNIKVLMATNRPDTLDPALMRPGR 336
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTP 341
DR+I +PD R I + R++ VE +AR P
Sbjct: 337 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCP 378
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 378 (138.1 bits), Expect = 2.0e-34, P = 2.0e-34
Identities = 84/215 (39%), Positives = 120/215 (55%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P+V + DVGG + + + PE + G++ G LL+GPPG GKTL A+AV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---GK 540
AN A FI + G EL+ KYVGE VR LF ART C++FFDE+DA+ R G
Sbjct: 230 ANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289
Query: 541 EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R + +L+ +LDG D R + V+ ATNRPD +D A++RPGR + + LP +
Sbjct: 290 GGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLE 349
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 635
R I + AR ++ + +A + C N +G
Sbjct: 350 GRTHIFKIHARSMSVERDIRFELLA--RLCPNSTG 382
Score = 311 (114.5 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 78/222 (35%), Positives = 112/222 (50%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG + +E+L+ V PL HP+ LG+ P G+LL+GPPG GKT A A+AN T
Sbjct: 174 YSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRT 233
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR--ENLQREM 240
F + +E+V G +R+LF A ++F DEIDAI R + +
Sbjct: 234 DACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDN 293
Query: 241 E-RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
E +R + +L+ +D P G + V+ ATNRPD +DPAL RPGR
Sbjct: 294 EVQRTMLELINQLDG----FDPR-------------GNIKVLMATNRPDTLDPALMRPGR 336
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTP 341
DR+I +PD R I + R++ VE +AR P
Sbjct: 337 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCP 378
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 396 (144.5 bits), Expect = 2.1e-34, P = 2.1e-34
Identities = 85/202 (42%), Positives = 124/202 (61%)
Query: 428 WEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEA 487
+ DV G D + + + +V ++ P +++ G + TG L+ GPPG GKTL+AKA+A EA
Sbjct: 155 FSDVAGCDEAKEDV-KELVDYLRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAGEA 213
Query: 488 GANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE-GGWVV 546
F I G + + +VG VR +F +A+ SPCI+F DE+DA+ +RG GG
Sbjct: 214 KVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQRGAGVGGGHD 273
Query: 547 ER--LLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGL 604
ER LNQ+L+E+DG + +G+ VI ATNRPDV+D A+LRPGRF + + V LP R
Sbjct: 274 EREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQ 333
Query: 605 ILEALARKKPIDDSVDLHTIAQ 626
IL+ RK P+ + V+ IA+
Sbjct: 334 ILKVHMRKVPLANDVEPSLIAR 355
Score = 357 (130.7 bits), Expect = 7.2e-30, P = 7.2e-30
Identities = 87/224 (38%), Positives = 122/224 (54%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
F D+ G + E++K E++ L P Q LG + G+L+ GPPG GKT LA AIA E
Sbjct: 155 FSDVAGCDEAKEDVK-ELVDYLRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAGEA 213
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE---NLQRE 239
VPF+ IS ++ V G +RD+F +A + +P I+FIDEIDA+ +R +
Sbjct: 214 KVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQRGAGVGGGHD 273
Query: 240 MERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
+ + Q++ MD G ++VI ATNRPD +DPAL RPGR
Sbjct: 274 EREQTLNQMLVEMD----------------GFEGNEG-IIVIAATNRPDVLDPALLRPGR 316
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
FDR++V+G+PD R QIL V R + + + IAR TPGF
Sbjct: 317 FDRQVVVGLPDVRGREQILKVHMRKVPLANDVEPSLIARGTPGF 360
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 396 (144.5 bits), Expect = 2.1e-34, P = 2.1e-34
Identities = 85/202 (42%), Positives = 124/202 (61%)
Query: 428 WEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEA 487
+ DV G D + + + +V ++ P +++ G + TG L+ GPPG GKTL+AKA+A EA
Sbjct: 155 FSDVAGCDEAKEDV-KELVDYLRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAGEA 213
Query: 488 GANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE-GGWVV 546
F I G + + +VG VR +F +A+ SPCI+F DE+DA+ +RG GG
Sbjct: 214 KVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQRGAGVGGGHD 273
Query: 547 ER--LLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGL 604
ER LNQ+L+E+DG + +G+ VI ATNRPDV+D A+LRPGRF + + V LP R
Sbjct: 274 EREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQ 333
Query: 605 ILEALARKKPIDDSVDLHTIAQ 626
IL+ RK P+ + V+ IA+
Sbjct: 334 ILKVHMRKVPLANDVEPSLIAR 355
Score = 357 (130.7 bits), Expect = 7.2e-30, P = 7.2e-30
Identities = 87/224 (38%), Positives = 122/224 (54%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
F D+ G + E++K E++ L P Q LG + G+L+ GPPG GKT LA AIA E
Sbjct: 155 FSDVAGCDEAKEDVK-ELVDYLRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAGEA 213
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRE---NLQRE 239
VPF+ IS ++ V G +RD+F +A + +P I+FIDEIDA+ +R +
Sbjct: 214 KVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQRGAGVGGGHD 273
Query: 240 MERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGR 299
+ + Q++ MD G ++VI ATNRPD +DPAL RPGR
Sbjct: 274 EREQTLNQMLVEMD----------------GFEGNEG-IIVIAATNRPDVLDPALLRPGR 316
Query: 300 FDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
FDR++V+G+PD R QIL V R + + + IAR TPGF
Sbjct: 317 FDRQVVVGLPDVRGREQILKVHMRKVPLANDVEPSLIARGTPGF 360
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 377 (137.8 bits), Expect = 2.6e-34, P = 2.6e-34
Identities = 81/207 (39%), Positives = 122/207 (58%)
Query: 424 PNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAV 483
P + D+GGL+ E IV + E++E+ G+ G LLYGPPG GKTL+A+A
Sbjct: 165 PTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARAC 224
Query: 484 ANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR-GKE- 541
A + A F+ + GP+L+ ++G+ VR F A+ SPCI+F DE+DA+ TKR E
Sbjct: 225 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEV 284
Query: 542 -GGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPD 600
G V+R + +LL +LDG + VI ATNR D++D A++R GR + + P PT +
Sbjct: 285 SGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEE 344
Query: 601 ERGLILEALARKKPIDDSVDLHTIAQS 627
RG IL+ +RK ++ V+ +A+S
Sbjct: 345 ARGRILQIHSRKMNVNADVNFEELARS 371
Score = 349 (127.9 bits), Expect = 3.2e-31, P = 3.2e-31
Identities = 79/221 (35%), Positives = 122/221 (55%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
+ D+GG+E ++EL +++P+ H + + LG+RP G+LLYGPPG GKT +A A A +T
Sbjct: 169 YNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQT 228
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F K++ ++V G + +RD F A +P I+FIDEIDAI +KR + + +R
Sbjct: 229 NATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 288
Query: 243 RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDR 302
+ ++ +++ G + VI ATNR D +DPAL R GR DR
Sbjct: 289 EVQRTMLELLNQLD-----GFSSDDR---------IKVIAATNRADILDPALMRSGRLDR 334
Query: 303 EIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
+I P E AR +IL + +R + V + ++ARST F
Sbjct: 335 KIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTDDF 375
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 377 (137.8 bits), Expect = 2.6e-34, P = 2.6e-34
Identities = 81/207 (39%), Positives = 120/207 (57%)
Query: 423 IPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKA 482
+P+ ++ +GGLD E I +K PE +E G+ G LLYGPPG GKTL+A+A
Sbjct: 126 VPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 185
Query: 483 VANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR---G 539
VA+ FI + G EL+ KY+GE VR LF AR +P I+F DE+D++ + R
Sbjct: 186 VAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIDSA 245
Query: 540 KEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTP 599
G V+R + +LL +LDG + K + +I ATNR D++D A+LRPGR + + P P+
Sbjct: 246 GSGDSEVQRTMLELLNQLDGFEPTKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSV 305
Query: 600 DERGLILEALARKKPIDDSVDLHTIAQ 626
+ R IL +R + ++L IA+
Sbjct: 306 EARADILRIHSRSMNLTRGINLTKIAE 332
Score = 325 (119.5 bits), Expect = 1.4e-28, P = 1.4e-28
Identities = 82/260 (31%), Positives = 131/260 (50%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVP 185
+GG++ ++E+K + + L HP+L + LG+ G+LLYGPPG GKT LA A+A+ T
Sbjct: 134 IGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCR 193
Query: 186 FYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIV 245
F ++S +E+V G +R+LF A APSI+F+DEID+I S R + + +
Sbjct: 194 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIDSAGSGDSEVQ 253
Query: 246 TQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDREIV 305
++ +++ +P + +I ATNR D +DPAL RPGR DR+I
Sbjct: 254 RTMLELLNQLDGF-EPTKN-------------IKIIMATNRLDILDPALLRPGRIDRKIE 299
Query: 306 LGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGFVXXXXXXXXXXXXXXXMK--RI 363
P AR IL + +R++ + +L KIA G ++ R+
Sbjct: 300 FPPPSVEARADILRIHSRSMNLTRGINLTKIAEKMNGCSGAELKGVCTEAGMYALRERRV 359
Query: 364 -IDQRKSELSGNSIAEQHSD 382
+ Q +L+ I +H D
Sbjct: 360 HVTQEDFDLATAKILNKHDD 379
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 377 (137.8 bits), Expect = 2.6e-34, P = 2.6e-34
Identities = 82/207 (39%), Positives = 121/207 (58%)
Query: 423 IPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKA 482
+P+ ++ VGGL E I +K PE +E G+ G +LYGPPG GKTL+A+A
Sbjct: 142 VPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARA 201
Query: 483 VANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GK 540
VA+ FI + G EL+ KY+GE VR LF AR +P I+F DE+D++ + R G
Sbjct: 202 VAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGS 261
Query: 541 EGG-WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTP 599
GG V+R + +LL +LDG + K + +I ATNR D++D A+LRPGR + + P P+
Sbjct: 262 GGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSV 321
Query: 600 DERGLILEALARKKPIDDSVDLHTIAQ 626
R IL +RK + ++L +A+
Sbjct: 322 AARAEILRIHSRKMNLTRGINLRKVAE 348
Score = 315 (115.9 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 79/221 (35%), Positives = 120/221 (54%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVP 185
+GG+ ++E+K + +P+ HP+L + LG+ G++LYGPPG GKT LA A+A+ T
Sbjct: 150 VGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCK 209
Query: 186 FYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR-ENL---QREME 241
F ++S E+V G +R+LF A APSI+F+DEID+I S R E E++
Sbjct: 210 FIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQ 269
Query: 242 RRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFD 301
R ++ +L+ +D G + +I ATNR D +DPAL RPGR D
Sbjct: 270 RTML-ELLNQLD--------GFETSKN---------IKIIMATNRLDILDPALLRPGRID 311
Query: 302 REIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPG 342
R+I P AR +IL + +R + + +L K+A G
Sbjct: 312 RKIEFPPPSVAARAEILRIHSRKMNLTRGINLRKVAEKMNG 352
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 376 (137.4 bits), Expect = 3.3e-34, P = 3.3e-34
Identities = 83/207 (40%), Positives = 122/207 (58%)
Query: 423 IPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKA 482
+P+ +E VGGLD E I +K PE ++ G+ G LL+GPPG GKTL+A+A
Sbjct: 153 VPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARA 212
Query: 483 VANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKR--GK 540
VA+ FI + G EL+ K++GE VR LF AR +P I+F DE+D++ + R G
Sbjct: 213 VAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGS 272
Query: 541 EGG-WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTP 599
GG V+R + +LL +LDG + K + VI ATNR D++D A+LRPGR + + P P
Sbjct: 273 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPAPDE 332
Query: 600 DERGLILEALARKKPIDDSVDLHTIAQ 626
R IL+ +RK + +++ IA+
Sbjct: 333 KARADILKIHSRKMNLMRGINMAKIAE 359
Score = 343 (125.8 bits), Expect = 2.2e-32, Sum P(2) = 2.2e-32
Identities = 78/220 (35%), Positives = 120/220 (54%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
++ +GG++ ++E+K + +P+ HP+L LG+ G+LL+GPPG GKT LA A+A+ T
Sbjct: 158 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVAHHT 217
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMER 242
F ++S +E+V G +R+LF A APSI+F+DEID+I S R +
Sbjct: 218 ECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGGDS 277
Query: 243 RIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRFDR 302
+ ++ +++ G + VI ATNR D +DPAL RPGR DR
Sbjct: 278 EVQRTMLELLNQLD-----GFEATKN---------IKVIMATNRIDILDPALLRPGRIDR 323
Query: 303 EIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPG 342
+I PDE AR IL + +R + + ++ KIA PG
Sbjct: 324 KIEFPAPDEKARADILKIHSRKMNLMRGINMAKIAEQIPG 363
Score = 39 (18.8 bits), Expect = 2.2e-32, Sum P(2) = 2.2e-32
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 396 RLTITMTDFEEAT-KMVQPSSRR 417
R+ +T DFE A K++Q S +
Sbjct: 385 RIHVTQEDFEMAVGKVMQKDSEK 407
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 376 (137.4 bits), Expect = 3.3e-34, P = 3.3e-34
Identities = 84/207 (40%), Positives = 120/207 (57%)
Query: 423 IPNVKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKA 482
IP+ ++ VGGLD E I IK PE +E G+ G LLYGPPG GKTL+A+A
Sbjct: 139 IPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 198
Query: 483 VANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEG 542
VA+ FI + G EL+ KY+GE VR LF AR +P I+F DE+D++ + RG+ G
Sbjct: 199 VAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGESG 258
Query: 543 GW----VVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPT 598
V+R + +LL +LDG + K + V+ TNR D++D A+LRPGR + + P P
Sbjct: 259 SGGGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPG 318
Query: 599 PDERGLILEALARKKPIDDSVDLHTIA 625
R IL+ +RK + ++L I+
Sbjct: 319 DAGRLDILKIHSRKMNLTRGINLKKIS 345
Score = 311 (114.5 bits), Expect = 4.7e-27, P = 4.7e-27
Identities = 77/222 (34%), Positives = 120/222 (54%)
Query: 126 LGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANETGVP 185
+GG++ ++E+K + +P+ HP+L + LG+ G+LLYGPPG GKT LA A+A+ T
Sbjct: 147 VGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 206
Query: 186 FYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKRENL-----QREM 240
F ++S +E+V G +R+LF A APSI+F+DEID+I S R E+
Sbjct: 207 FIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGESGSGGGDSEV 266
Query: 241 ERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPGRF 300
+R ++ +L+ +D G + V+ TNR D +DPAL RPGR
Sbjct: 267 QRTML-ELLNQLD--------GFESTKN---------IKVLMCTNRIDILDPALLRPGRI 308
Query: 301 DREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPG 342
DR+I P + R+ IL + +R + + +L KI+ G
Sbjct: 309 DRKIEFPNPGDAGRLDILKIHSRKMNLTRGINLKKISDKMNG 350
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 357 (130.7 bits), Expect = 3.6e-34, Sum P(2) = 3.6e-34
Identities = 75/175 (42%), Positives = 106/175 (60%)
Query: 426 VKWEDVGGLDYLRHEFDRYIVRRIKFPEEYEEFGVDLETGFLLYGPPGCGKTLIAKAVAN 485
+ ++ +GGL E I +K PE ++ G+ G LLYGPPG GKTL+AKAVA
Sbjct: 178 ITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAA 237
Query: 486 EAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWV 545
GANFI +++KY+GES +R +F+ A+ PCI+F DEVDA+ +R EG
Sbjct: 238 TIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSA 297
Query: 546 ---VERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLP 597
++R L +LL ++DG D +I ATNRPD +D A+LRPGR + + +PLP
Sbjct: 298 DREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLP 352
Score = 350 (128.3 bits), Expect = 2.5e-31, P = 2.5e-31
Identities = 81/225 (36%), Positives = 125/225 (55%)
Query: 123 FQDLGGMESVLEELKMEVIVPLYHPQLPQWLGVRPMAGILLYGPPGCGKTKLAHAIANET 182
F +GG+ + EL+ + +PL +P++ Q +G++P G+LLYGPPG GKT LA A+A
Sbjct: 180 FDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATI 239
Query: 183 GVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASKR----ENLQR 238
G F A+ +V G S IR++F+ A P I+F+DE+DAI +R + R
Sbjct: 240 GANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSADR 299
Query: 239 EMERRIVTQLMTCMDESHRLVQPGXXXXXXXXXXXXPGYVLVIGATNRPDAVDPALRRPG 298
E++R ++ +L+T MD L G +I ATNRPD +DPAL RPG
Sbjct: 300 EIQRTLM-ELLTQMDGFDNL-----------------GQTKIIMATNRPDTLDPALLRPG 341
Query: 299 RFDREIVLGVPDENARVQILSVLTRNLRVEGSFDLVKIARSTPGF 343
R DR++ + +P+E R++I + T ++ G FD + + GF
Sbjct: 342 RLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGF 386
Score = 41 (19.5 bits), Expect = 3.6e-34, Sum P(2) = 3.6e-34
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 390 LPEEMERLTITMTDFEE 406
LP E + L MT FE+
Sbjct: 159 LPRETDPLVYNMTSFEQ 175
WARNING: HSPs involving 484 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.136 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 702 615 0.00088 120 3 11 22 0.41 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 734
No. of states in DFA: 616 (65 KB)
Total size of DFA: 306 KB (2158 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 48.92u 0.11s 49.03t Elapsed: 00:00:02
Total cpu time: 49.01u 0.11s 49.12t Elapsed: 00:00:02
Start: Sat May 11 09:44:45 2013 End: Sat May 11 09:44:47 2013
WARNINGS ISSUED: 2