BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 045280
         (145 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|1XKH|A Chain A, Pyoverdine Outer Membrane Receptor Fpva From Pseudomonas
           Aeruginosa Pao1 Bound To Pyoverdine
 pdb|1XKH|B Chain B, Pyoverdine Outer Membrane Receptor Fpva From Pseudomonas
           Aeruginosa Pao1 Bound To Pyoverdine
 pdb|1XKH|C Chain C, Pyoverdine Outer Membrane Receptor Fpva From Pseudomonas
           Aeruginosa Pao1 Bound To Pyoverdine
          Length = 687

 Score = 28.9 bits (63), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 7/54 (12%)

Query: 21  TYSIEFKFPAIFNFGDS-NSDTGNLIAAGIESLDPPNGQTYFQKPSGRYSDGRL 73
           TYS+   +  IF   DS   D+ N +      L+P  GQ Y     G Y DGRL
Sbjct: 454 TYSVYASYTDIFXPQDSWYRDSSNKL------LEPDEGQNYEIGIKGEYLDGRL 501


>pdb|2IAH|A Chain A, Crystal Structure Of The Ferripyoverdine Receptor Of The
           Outer Membrane Of Pseudomonas Aeruginosa Bound To
           Ferripyoverdine.
 pdb|2O5P|A Chain A, Crystal Structure Of The Full Length Ferric Pyoverdine
           Outer Membrane Receptor Fpva Of Pseudomonas Aeruginosa
           In Its Apo Form
 pdb|2O5P|B Chain B, Crystal Structure Of The Full Length Ferric Pyoverdine
           Outer Membrane Receptor Fpva Of Pseudomonas Aeruginosa
           In Its Apo Form
 pdb|2W16|A Chain A, Structures Of Fpva Bound To Heterologous Pyoverdines
 pdb|2W16|B Chain B, Structures Of Fpva Bound To Heterologous Pyoverdines
 pdb|2W6T|A Chain A, Structures Of P. Aeruginosa Fpva Bound To Heterologous
           Pyoverdines: Fpva-Pvd(Dsm50106)-Fe Complex
 pdb|2W6T|B Chain B, Structures Of P. Aeruginosa Fpva Bound To Heterologous
           Pyoverdines: Fpva-Pvd(Dsm50106)-Fe Complex
 pdb|2W6U|A Chain A, Structures Of P. Aeruginosa Fpva Bound To Heterologous
           Pyoverdines: Fpva-Pvd(G173)-Fe Complex
 pdb|2W6U|B Chain B, Structures Of P. Aeruginosa Fpva Bound To Heterologous
           Pyoverdines: Fpva-Pvd(G173)-Fe Complex
 pdb|2W75|A Chain A, Structures Of P. Aeruginosa Fpva Bound To Heterologous
           Pyoverdines: Apo-Fpva
 pdb|2W75|B Chain B, Structures Of P. Aeruginosa Fpva Bound To Heterologous
           Pyoverdines: Apo-Fpva
 pdb|2W76|A Chain A, Structures Of P. Aeruginosa Fpva Bound To Heterologous
           Pyoverdines: Fpva-Pvd(Pa6)-Fe Complex
 pdb|2W76|B Chain B, Structures Of P. Aeruginosa Fpva Bound To Heterologous
           Pyoverdines: Fpva-Pvd(Pa6)-Fe Complex
 pdb|2W77|A Chain A, Structures Of P. Aeruginosa Fpva Bound To Heterologous
           Pyoverdines: Fpva-Pvd(Pfl18.1)-Fe Complex
 pdb|2W77|B Chain B, Structures Of P. Aeruginosa Fpva Bound To Heterologous
           Pyoverdines: Fpva-Pvd(Pfl18.1)-Fe Complex
 pdb|2W78|A Chain A, Structures Of P. Aeruginosa Fpva Bound To Heterologous
           Pyoverdines: Fpva-Pvd(Atcc13535)-Fe Complex
 pdb|2W78|B Chain B, Structures Of P. Aeruginosa Fpva Bound To Heterologous
           Pyoverdines: Fpva-Pvd(Atcc13535)-Fe Complex
          Length = 772

 Score = 28.1 bits (61), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 7/54 (12%)

Query: 21  TYSIEFKFPAIFNFGDS-NSDTGNLIAAGIESLDPPNGQTYFQKPSGRYSDGRL 73
           TYS+   +  IF   DS   D+ N +      L+P  GQ Y     G Y DGRL
Sbjct: 539 TYSVYASYTDIFMPQDSWYRDSSNKL------LEPDEGQNYEIGIKGEYLDGRL 586


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.326    0.141    0.418 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,212,988
Number of Sequences: 62578
Number of extensions: 173093
Number of successful extensions: 348
Number of sequences better than 100.0: 4
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 347
Number of HSP's gapped (non-prelim): 4
length of query: 145
length of database: 14,973,337
effective HSP length: 89
effective length of query: 56
effective length of database: 9,403,895
effective search space: 526618120
effective search space used: 526618120
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 47 (22.7 bits)