BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045287
(104 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9T039|EC14_ARATH Egg cell-secreted protein 1.4 OS=Arabidopsis thaliana GN=EC1.4 PE=2
SV=1
Length = 127
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/91 (61%), Positives = 68/91 (74%), Gaps = 7/91 (7%)
Query: 5 DLVIRLEVSGGLTECWNTLMELKSCSNEIVIFFLNSQADIGPDYCRAIDIITRNCWPAML 64
++ RL+ SGGL ECWN L ELKSC+NEIV+FFLN + +G C ++DIIT NCWPAML
Sbjct: 35 NIAARLQ-SGGLMECWNALYELKSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAML 93
Query: 65 TSLGFTAEEGNILRGYC------DASSAPSP 89
TSLGFT EE N+LRG+C D+S APSP
Sbjct: 94 TSLGFTPEEANVLRGFCQNPNSGDSSPAPSP 124
>sp|Q9SJ24|EC12_ARATH Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana GN=EC1.2 PE=2
SV=1
Length = 125
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 59/70 (84%)
Query: 14 GGLTECWNTLMELKSCSNEIVIFFLNSQADIGPDYCRAIDIITRNCWPAMLTSLGFTAEE 73
GGL ECWN L ELKSC+NEIV+FFLN + +G D C+A+++IT +CWPAMLTSLGFT++E
Sbjct: 41 GGLMECWNALYELKSCTNEIVLFFLNGETKLGVDCCQAVEVITTDCWPAMLTSLGFTSDE 100
Query: 74 GNILRGYCDA 83
N+LRG+C +
Sbjct: 101 TNVLRGFCQS 110
>sp|Q9SJ23|EC13_ARATH Egg cell-secreted protein 1.3 OS=Arabidopsis thaliana GN=EC1.3 PE=2
SV=1
Length = 125
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Query: 14 GGLTECWNTLMELKSCSNEIVIFFLNSQADIGPDYCRAIDIITRNCWPAMLTSLGFTAEE 73
GGL +CW+ L ELKSC+NEIV+FFLN + +G C A+D+IT +CWPAMLTSLGFT EE
Sbjct: 41 GGLMQCWDALYELKSCTNEIVLFFLNGETKLGYGCCNAVDVITTDCWPAMLTSLGFTLEE 100
Query: 74 GNILRGYCDASSAPSPGGLALIYQP 98
N+LRG+C +P+ GG + P
Sbjct: 101 TNVLRGFCQ---SPNSGGSSPALSP 122
>sp|Q9SRD8|EC11_ARATH Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana GN=EC1.1 PE=2
SV=1
Length = 158
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 59/85 (69%)
Query: 6 LVIRLEVSGGLTECWNTLMELKSCSNEIVIFFLNSQADIGPDYCRAIDIITRNCWPAMLT 65
LV RL++ CW++LM+L+ CS E+++FFLN + IGP C AI I R CWP M+
Sbjct: 44 LVYRLKLDEDTGYCWDSLMQLQHCSGELILFFLNGETYIGPGCCSAIRTIGRKCWPTMIG 103
Query: 66 SLGFTAEEGNILRGYCDASSAPSPG 90
LGFTA+EG++L+GYCD + + + G
Sbjct: 104 VLGFTAQEGDMLQGYCDGNDSDNNG 128
>sp|Q9FGG1|EC15_ARATH Egg cell-secreted protein 1.5 OS=Arabidopsis thaliana GN=EC1.5 PE=2
SV=1
Length = 155
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 59/109 (54%), Gaps = 15/109 (13%)
Query: 1 LRIYDLVIRLEVSGGLTECWNTLMELKSCSNEIVIFFLNS--------QADIGPDYCRAI 52
L+ + +G L +CWN +ELKSC++EIV FFL+ + I D C AI
Sbjct: 35 LQFTKMATDHSGAGNLMDCWNAGLELKSCTDEIVKFFLSQTGTSEPPVKGGIDKDCCGAI 94
Query: 53 DIITRNCWPAMLTSLGFTAEEGNILRGYC-------DASSAPSPGGLAL 94
++ ++CW M TSLG T EGN LR YC + S +P+P LAL
Sbjct: 95 GLVVKDCWSVMFTSLGLTTMEGNNLREYCEFQAEKSELSPSPAPETLAL 143
>sp|Q92LA1|LEUD_RHIME 3-isopropylmalate dehydratase small subunit OS=Rhizobium meliloti
(strain 1021) GN=leuD PE=3 SV=1
Length = 201
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 18 ECWNTLMELKS-CSNEIVIFFLNSQADIGPDYCR---AIDIITRNCWPAMLTSLGFTAEE 73
E + LM+ S SN I+ L +Q GPD +D R+C L +G T E+
Sbjct: 124 EDLDKLMDDASRGSNAILTVDLEAQEITGPDGGSIKFEVDAFKRHCLLNGLDDIGLTLEK 183
Query: 74 GNILRGYCDASSAPSP 89
G + Y A++A P
Sbjct: 184 GGSIDNYEKATAASRP 199
>sp|Q47BL9|OTC_DECAR Ornithine carbamoyltransferase OS=Dechloromonas aromatica (strain
RCB) GN=argF PE=3 SV=1
Length = 306
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
Query: 47 DYCRAIDIITRNCWPAMLTSLGFTAEEGNILRGYCDASSAPSPGGLALIYQPQVSFFF 104
D CR D++T + W TS+GF AE ++ + D G + + PQ F
Sbjct: 209 DACRGADLVTTDVW----TSMGFEAENEERIKAFADWC---VDGDMMRVANPQAVFMH 259
>sp|O14057|GUAD_SCHPO Probable guanine deaminase OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=SPCC1672.03c PE=3 SV=1
Length = 527
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 43 DIGPDYCRAIDIITRNCWPAMLTSLGFTAEEGNI 76
D+ + +DI R+ WP ML+ FT+++ N+
Sbjct: 401 DLSAETHSCVDIFERDTWPVMLSKWVFTSDDRNL 434
>sp|Q19825|SYRC_CAEEL Probable arginine--tRNA ligase, cytoplasmic OS=Caenorhabditis
elegans GN=rrt-1 PE=2 SV=2
Length = 713
Score = 28.9 bits (63), Expect = 8.5, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 2 RIYDLVIRLEV-SGGLTECWNTLMELKSCSNEIVIFFLNSQ-ADIGPDY 48
R Y+ V++L+ G + + WNT+ ++ N+IV +L+ + D+G +
Sbjct: 341 RAYEYVVKLQSHDGDIVKAWNTICDVSKKYNQIVYNYLDIKIKDVGESF 389
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.141 0.450
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,058,818
Number of Sequences: 539616
Number of extensions: 1268793
Number of successful extensions: 3228
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 3221
Number of HSP's gapped (non-prelim): 9
length of query: 104
length of database: 191,569,459
effective HSP length: 73
effective length of query: 31
effective length of database: 152,177,491
effective search space: 4717502221
effective search space used: 4717502221
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)