Query 045288
Match_columns 236
No_of_seqs 106 out of 1114
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 20:44:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045288.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045288hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oox_A Putative 2OG-Fe(II) oxy 100.0 3E-59 1E-63 401.0 22.0 224 6-235 4-237 (312)
2 1odm_A Isopenicillin N synthas 100.0 2.1E-57 7.1E-62 392.4 20.0 225 1-235 1-259 (331)
3 1gp6_A Leucoanthocyanidin diox 100.0 4E-57 1.4E-61 393.9 21.6 222 7-235 45-277 (356)
4 1w9y_A 1-aminocyclopropane-1-c 100.0 6E-56 2.1E-60 381.0 15.1 215 7-235 2-223 (319)
5 3on7_A Oxidoreductase, iron/as 100.0 7.4E-53 2.5E-57 355.9 20.4 202 7-235 2-220 (280)
6 1dcs_A Deacetoxycephalosporin 100.0 2E-53 7E-58 364.4 15.4 204 7-235 3-232 (311)
7 3dkq_A PKHD-type hydroxylase S 75.4 6.8 0.00023 31.4 6.4 82 142-231 74-173 (243)
8 3itq_A Prolyl 4-hydroxylase, a 72.1 10 0.00036 29.7 6.6 71 141-229 93-179 (216)
9 2jig_A Prolyl-4 hydroxylase; h 66.4 12 0.0004 29.3 5.8 72 142-228 81-183 (224)
10 3tht_A Alkylated DNA repair pr 50.9 18 0.00062 30.5 4.7 59 166-232 198-262 (345)
11 3o2g_A Gamma-butyrobetaine dio 47.9 6 0.0002 34.0 1.2 52 8-68 122-173 (388)
12 2opi_A L-fuculose-1-phosphate 47.8 9.2 0.00031 29.7 2.2 37 8-51 125-161 (212)
13 1otj_A Alpha-ketoglutarate-dep 44.5 23 0.00079 28.5 4.3 48 8-65 17-64 (283)
14 1m5a_B Insulin B chain; alpha 42.7 30 0.001 18.1 3.0 19 27-45 9-27 (30)
15 2dbn_A Hypothetical protein YB 42.1 11 0.00038 33.1 2.0 55 5-67 97-151 (461)
16 1e4c_P L-fuculose 1-phosphate 40.2 14 0.00047 28.8 2.1 37 8-51 122-158 (215)
17 2fk5_A Fuculose-1-phosphate al 40.2 16 0.00056 28.1 2.5 50 8-64 117-175 (200)
18 2iuw_A Alkylated repair protei 38.6 53 0.0018 25.9 5.5 59 167-232 127-203 (238)
19 1pvt_A Sugar-phosphate aldolas 37.8 18 0.00061 28.6 2.5 38 7-51 160-197 (238)
20 1oih_A Putative alkylsulfatase 37.0 36 0.0012 27.7 4.3 37 28-67 40-77 (301)
21 2v9l_A Rhamnulose-1-phosphate 32.9 20 0.00067 29.1 2.0 37 8-51 179-215 (274)
22 3ocr_A Class II aldolase/adduc 32.0 23 0.0008 28.7 2.3 38 8-51 156-193 (273)
23 3pvj_A Alpha-ketoglutarate-dep 28.0 52 0.0018 26.5 3.8 50 7-66 14-63 (277)
24 2irp_A Putative aldolase class 27.8 32 0.0011 26.4 2.4 36 8-51 139-177 (208)
25 3jsy_A Acidic ribosomal protei 27.8 1.2E+02 0.0041 23.5 5.7 38 26-63 5-43 (213)
26 3i3q_A Alpha-ketoglutarate-dep 27.5 62 0.0021 25.1 4.0 58 167-232 106-172 (211)
27 4ay7_A Methylcobalamin\: coenz 27.1 1.1E+02 0.0037 25.4 5.7 41 27-67 304-348 (348)
28 4f3y_A DHPR, dihydrodipicolina 26.9 46 0.0016 26.9 3.2 37 30-66 112-148 (272)
29 3qy9_A DHPR, dihydrodipicolina 26.7 47 0.0016 26.4 3.2 41 27-67 88-128 (243)
30 3ijp_A DHPR, dihydrodipicolina 26.2 52 0.0018 26.9 3.5 38 30-67 127-164 (288)
31 3s57_A Alpha-ketoglutarate-dep 25.5 1.2E+02 0.0041 23.2 5.3 59 167-232 101-176 (204)
32 1zav_A 50S ribosomal protein L 25.4 1.7E+02 0.0058 21.8 6.1 39 26-64 8-47 (180)
33 2j01_J 50S ribosomal protein L 24.9 1.5E+02 0.0053 21.9 5.7 38 26-63 6-45 (173)
34 3r1j_A Alpha-ketoglutarate-dep 21.4 1E+02 0.0035 25.1 4.4 49 8-66 21-70 (301)
35 3ghf_A Septum site-determining 21.1 1.2E+02 0.0041 21.1 4.1 35 10-51 50-84 (120)
36 2do1_A Nuclear protein HCC-1; 20.9 77 0.0026 19.0 2.6 31 30-63 15-45 (55)
37 2x4k_A 4-oxalocrotonate tautom 20.2 1.1E+02 0.0036 17.7 3.3 22 135-156 18-40 (63)
No 1
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=3e-59 Score=400.98 Aligned_cols=224 Identities=17% Similarity=0.274 Sum_probs=198.8
Q ss_pred CCCCceeeCCCCCCCCCcccHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHhhhCCCHHHHhhcCCC-CCCcC
Q 045288 6 VPKLPVVNLSKENLKPGASSWLGTSRKVREALEEFGCFVALYDEVSLELHNAIFSAAEELFNLPIEIKEKNVSE-KPYYG 84 (236)
Q Consensus 6 ~~~iPvIDl~~l~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~G 84 (236)
..+||||||+.+ . +.+.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ..++|
T Consensus 4 ~~~iPvIDls~~--~---~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~G 78 (312)
T 3oox_A 4 TSAIDPVSFSLY--A---KDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARG 78 (312)
T ss_dssp CCSSCCEETHHH--H---HCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSE
T ss_pred CCCCCeEEChHh--c---ccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCccc
Confidence 568999999985 2 25778999999999999999999999999999999999999999999999999874 56789
Q ss_pred ccCCCC------CCCcceeeeeccCCCC--cccccCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-h
Q 045288 85 YLGNNP------LVPAIYEGMGVDYANT--IEGTQNFTNLIWPEGNENFCKTVVSYSRLVSELEQMVKRMVFESYGVD-K 155 (236)
Q Consensus 85 Y~~~~~------~~~d~~E~~~~~~~~~--~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~ 155 (236)
|.+.+. +..|++|+|.++.... .+....+.+|.||+.+++||+.+++|++.|.+++..|+++|+++||++ +
T Consensus 79 y~~~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~ 158 (312)
T 3oox_A 79 YIPFGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERD 158 (312)
T ss_dssp EECCCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTT
T ss_pred cccccceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHH
Confidence 987654 2469999999976432 222234567999999999999999999999999999999999999999 8
Q ss_pred hhHHhhcCcccceeccccCCCCCCCCCcccccccCCCceeEEeeCCCCceeEEcCCCCeEeccCCCCCeEEEecCccccc
Q 045288 156 YYDSVLESSTYLLRIMKYRCPETNEKNLGCDVHTDKSFITVLHQNEVNGLEIRTKDGCWIGFDDPTPSSFIVLAGDAFLV 235 (236)
Q Consensus 156 ~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lT~L~~~~~~GLqv~~~~g~W~~v~p~~~~~~iVn~Gd~le~ 235 (236)
+|.+.++.+.+.+|++||||++.+...+|+++|||+|+||||+||+++||||++++|+|++|+| .||++|||+||+||+
T Consensus 159 ~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p-~pg~~vVNiGD~l~~ 237 (312)
T 3oox_A 159 FFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINP-PPGCLVINIGDMLER 237 (312)
T ss_dssp TTHHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCC-CSSCEEEEECHHHHH
T ss_pred HHHHHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCCcEEECCC-CCCeEEEEhHHHHHH
Confidence 9999998888999999999998765559999999999999999999999999999999999999 999999999999986
No 2
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=2.1e-57 Score=392.38 Aligned_cols=225 Identities=18% Similarity=0.263 Sum_probs=197.4
Q ss_pred CCCCCCCCCceeeCCCCCCCCCcccHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHhh-hCCCHHHHhhcCCC
Q 045288 1 MGSLSVPKLPVVNLSKENLKPGASSWLGTSRKVREALEEFGCFVALYDEVSLELHNAIFSAAEEL-FNLPIEIKEKNVSE 79 (236)
Q Consensus 1 m~~~~~~~iPvIDl~~l~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~f-F~lp~e~K~~~~~~ 79 (236)
|||.+..+||||||+.+ ..+++++|..++++|.+||++||||||+|||| +++++++++++| |+||.|+|+++..
T Consensus 1 m~s~~~~~iPvIDls~l-~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~- 75 (331)
T 1odm_A 1 MGSVSKANVPKIDVSPL-FGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI- 75 (331)
T ss_dssp --CCCBCCCCEEECGGG-GSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC-
T ss_pred CCcccCCCCCEEEchHh-cCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh-
Confidence 99999999999999996 34344567889999999999999999999999 899999999999 9999999999976
Q ss_pred CCCcCccCCCC------------CCCcceeeeeccCCCC--ccc----ccCCCCCCCCCC--CccHHHHHHHHHHHHHHH
Q 045288 80 KPYYGYLGNNP------------LVPAIYEGMGVDYANT--IEG----TQNFTNLIWPEG--NENFCKTVVSYSRLVSEL 139 (236)
Q Consensus 80 ~~~~GY~~~~~------------~~~d~~E~~~~~~~~~--~~~----~~~~~~~~wP~~--~~~f~~~~~~y~~~~~~l 139 (236)
+||.+.+. +..||+|+|.++.... .+. .....+|.||+. +++||+.+++|++.|.++
T Consensus 76 ---~Gy~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l 152 (331)
T 1odm_A 76 ---RAYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGL 152 (331)
T ss_dssp ---TTTCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHH
T ss_pred ---cCCCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHH
Confidence 68876653 2569999999986432 111 112357899997 999999999999999999
Q ss_pred HHHHHHHHHHHcCCC-hhhHHhhcCccccee--ccccC------C---CCCCCC-CcccccccCCCceeEEeeCCCCcee
Q 045288 140 EQMVKRMVFESYGVD-KYYDSVLESSTYLLR--IMKYR------C---PETNEK-NLGCDVHTDKSFITVLHQNEVNGLE 206 (236)
Q Consensus 140 ~~~ll~~l~~~Lgl~-~~~~~~~~~~~~~lr--~~~Yp------~---~~~~~~-~~~~~~HtD~~~lT~L~~~~~~GLq 206 (236)
+..|+++|+++||++ ++|.+.++.+.+.+| ++||| | |++++. .+|+++|||+|+||||+||+++|||
T Consensus 153 ~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQ 232 (331)
T 1odm_A 153 SSALLKGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQ 232 (331)
T ss_dssp HHHHHHHHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCCEE
T ss_pred HHHHHHHHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeCCCCCEE
Confidence 999999999999999 899998888889999 99999 7 766665 8999999999999999999999999
Q ss_pred EEcCCCCeEeccCCCCCeEEEecCccccc
Q 045288 207 IRTKDGCWIGFDDPTPSSFIVLAGDAFLV 235 (236)
Q Consensus 207 v~~~~g~W~~v~p~~~~~~iVn~Gd~le~ 235 (236)
|++++| |++|+| .||++|||+||+||+
T Consensus 233 V~~~~g-Wi~V~p-~pgalvVNiGD~l~~ 259 (331)
T 1odm_A 233 VETAAG-YQDIEA-DDTGYLINCGSYMAH 259 (331)
T ss_dssp EEETTE-EEECCC-CTTSEEEEECHHHHH
T ss_pred EEcCCC-eEECCC-CCCeEEEEccHHHHH
Confidence 998999 999999 999999999999986
No 3
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=4e-57 Score=393.86 Aligned_cols=222 Identities=20% Similarity=0.292 Sum_probs=197.6
Q ss_pred CCCceeeCCCCCCCCCcccHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHhhhCCCHHHHhhcCCC---CCCc
Q 045288 7 PKLPVVNLSKENLKPGASSWLGTSRKVREALEEFGCFVALYDEVSLELHNAIFSAAEELFNLPIEIKEKNVSE---KPYY 83 (236)
Q Consensus 7 ~~iPvIDl~~l~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~---~~~~ 83 (236)
.+||||||+.+ .++++.+|.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ..++
T Consensus 45 ~~iPvIDls~l-~~~~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~ 123 (356)
T 1gp6_A 45 PQVPTIDLKNI-ESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQ 123 (356)
T ss_dssp CCCCEEECTTT-TCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCS
T ss_pred CCCCEEEchhc-cCCChHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCcc
Confidence 46999999996 2333345788999999999999999999999999999999999999999999999999865 2578
Q ss_pred CccCCCC----CCCcceeeeeccCCCCcccccCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-hhhH
Q 045288 84 GYLGNNP----LVPAIYEGMGVDYANTIEGTQNFTNLIWPEGNENFCKTVVSYSRLVSELEQMVKRMVFESYGVD-KYYD 158 (236)
Q Consensus 84 GY~~~~~----~~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~~~ 158 (236)
||..... +..||+|+|.++..... ....|.||+.+++||+.+++|++.|++++..|+++|+++||++ ++|.
T Consensus 124 Gy~~~~~~~~~~~~d~kE~~~~~~~p~~----~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~ 199 (356)
T 1gp6_A 124 GYGSKLANNASGQLEWEDYFFHLAYPEE----KRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLE 199 (356)
T ss_dssp EEECCCCCSTTCCCCSCEEEEEEEESGG----GCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHH
T ss_pred ccCcCcccCCCCCCChhheeeeecCCcc----ccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 9987643 45699999999854321 1356889999999999999999999999999999999999999 8998
Q ss_pred Hhhc---CcccceeccccCCCCCCCCCcccccccCCCceeEEeeCCCCceeEEcCCCCeEeccCCCCCeEEEecCccccc
Q 045288 159 SVLE---SSTYLLRIMKYRCPETNEKNLGCDVHTDKSFITVLHQNEVNGLEIRTKDGCWIGFDDPTPSSFIVLAGDAFLV 235 (236)
Q Consensus 159 ~~~~---~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lT~L~~~~~~GLqv~~~~g~W~~v~p~~~~~~iVn~Gd~le~ 235 (236)
+.+. .+.+.||++|||||++++..+|+++|||+|+||||+||+++||||+ ++|+|++|+| .||++|||+||+||+
T Consensus 200 ~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~-~~g~Wi~V~p-~pgalvVNiGD~l~~ 277 (356)
T 1gp6_A 200 KEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLF-YEGKWVTAKC-VPDSIVMHIGDTLEI 277 (356)
T ss_dssp HHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEECSCCCEEEE-ETTEEEECCC-CTTCEEEEECHHHHH
T ss_pred HHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEEEEcCCCCeEEe-cCCcEEECcC-CCCeEEEEeccHHHH
Confidence 8886 4778899999999998888999999999999999999999999997 6899999999 999999999999986
No 4
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=6e-56 Score=381.00 Aligned_cols=215 Identities=18% Similarity=0.281 Sum_probs=190.8
Q ss_pred CCCceeeCCCCCCCCCcccHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHhhhCCCHHHHhhcCCCCCCcCcc
Q 045288 7 PKLPVVNLSKENLKPGASSWLGTSRKVREALEEFGCFVALYDEVSLELHNAIFSAAEELFNLPIEIKEKNVSEKPYYGYL 86 (236)
Q Consensus 7 ~~iPvIDl~~l~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~GY~ 86 (236)
.+||||||+.+ . +.+|..++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... .+||.
T Consensus 2 ~~iPvIDls~l--~--~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~--~~Gy~ 75 (319)
T 1w9y_A 2 ENFPIISLDKV--N--GVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA--SKALE 75 (319)
T ss_dssp CCCCEEEGGGG--G--STTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHT
T ss_pred CCCCEEECccc--C--cccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC--CCCCC
Confidence 46999999985 2 345788999999999999999999999999999999999999999999999998643 34887
Q ss_pred CCCC--CCCcceeeeeccCCCCcccccCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-hhhHHhhcC
Q 045288 87 GNNP--LVPAIYEGMGVDYANTIEGTQNFTNLIWPEGNENFCKTVVSYSRLVSELEQMVKRMVFESYGVD-KYYDSVLES 163 (236)
Q Consensus 87 ~~~~--~~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~~~~~~~~ 163 (236)
+.+. +..||+|.|.++.... ...|.||+.+++||+.+++|++.|.+++..|+++|+++||++ ++|.+.+..
T Consensus 76 ~~~~e~~~~d~ke~~~~~~~p~------~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~ 149 (319)
T 1w9y_A 76 GVQAEVTDMDWESTFFLKHLPI------SNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYG 149 (319)
T ss_dssp TCCCCGGGCCCCEEEEEEEESC------CGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHT
T ss_pred cccccCCCCChhhheeeecCCc------ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcC
Confidence 6544 4568999999875321 235789999999999999999999999999999999999999 899888763
Q ss_pred ---cccceeccccCCCCCCCCCcccccccCCCceeEEeeC-CCCceeEEcCCCCeEeccCCCCCeEEEecCccccc
Q 045288 164 ---STYLLRIMKYRCPETNEKNLGCDVHTDKSFITVLHQN-EVNGLEIRTKDGCWIGFDDPTPSSFIVLAGDAFLV 235 (236)
Q Consensus 164 ---~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lT~L~~~-~~~GLqv~~~~g~W~~v~p~~~~~~iVn~Gd~le~ 235 (236)
..+.+|++|||||++++...|+++|||+|+||||+|| +++||||+ ++|+|++|+| .||++|||+||+||+
T Consensus 150 ~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~-~~g~Wi~V~p-~pgalvVNiGD~l~~ 223 (319)
T 1w9y_A 150 SKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGQWIDVPP-MRHSIVVNLGDQLEV 223 (319)
T ss_dssp TTCCEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEE-ETTEEEECCC-CTTCEEEEECHHHHH
T ss_pred cCCccceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEe-eCCeEEEccc-CCCcEEEEhHHHHHH
Confidence 5578999999999988888999999999999999995 79999995 7999999999 999999999999986
No 5
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=7.4e-53 Score=355.88 Aligned_cols=202 Identities=22% Similarity=0.322 Sum_probs=176.2
Q ss_pred CCCceeeCCCCCCCCCcccHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHhhhCCCHHHHhhcCCC-CCCcCc
Q 045288 7 PKLPVVNLSKENLKPGASSWLGTSRKVREALEEFGCFVALYDEVSLELHNAIFSAAEELFNLPIEIKEKNVSE-KPYYGY 85 (236)
Q Consensus 7 ~~iPvIDl~~l~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~GY 85 (236)
++||||||+.. .++++|.+||++||||||+||||+.++++++++++++||++ |+|+++... ..++||
T Consensus 2 ~~IPvIDls~~----------~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~~~~GY 69 (280)
T 3on7_A 2 MKLETIDYRAA----------DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRETHDGF 69 (280)
T ss_dssp --CCEEETTST----------THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTTTCCEE
T ss_pred CCCCEEECCCh----------hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCCCCCcc
Confidence 47999999873 14799999999999999999999999999999999999998 789998754 468999
Q ss_pred cCCC-C------CCCcceeeeeccCCCCcccccCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--hh
Q 045288 86 LGNN-P------LVPAIYEGMGVDYANTIEGTQNFTNLIWPEGNENFCKTVVSYSRLVSELEQMVKRMVFESYGVD--KY 156 (236)
Q Consensus 86 ~~~~-~------~~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~--~~ 156 (236)
.+.+ . ...|++|.|.+. +||..+++||+.+++|+++|.+++..|+++|+++||++ +.
T Consensus 70 ~~~~~~e~~~~~~~~D~kE~~~~~--------------p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~ 135 (280)
T 3on7_A 70 FPASISETAKGHTVKDIKEYYHVY--------------PWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAK 135 (280)
T ss_dssp ECCC--------CCCCSCEEEEEC--------------TTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTT
T ss_pred ccCccccccCCCCcccHHHHHhcC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhh
Confidence 8765 2 246899998763 37777889999999999999999999999999999976 22
Q ss_pred ----hHHhhcCcc-cceeccccCCCCCCC--CCcccccccCCCceeEEeeCCCCceeEEcCCCCeEeccCCCCCeEEEec
Q 045288 157 ----YDSVLESST-YLLRIMKYRCPETNE--KNLGCDVHTDKSFITVLHQNEVNGLEIRTKDGCWIGFDDPTPSSFIVLA 229 (236)
Q Consensus 157 ----~~~~~~~~~-~~lr~~~Yp~~~~~~--~~~~~~~HtD~~~lT~L~~~~~~GLqv~~~~g~W~~v~p~~~~~~iVn~ 229 (236)
|.+.+..+. +.+|++|||||+.++ ..+|+++|||+|+||+|+||+++||||++++|+|++|+| .||++|||+
T Consensus 136 ~~~~~~~~~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p-~pg~~vVNi 214 (280)
T 3on7_A 136 FSIPLPEMIANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDGSWLDVPS-DFGNIIINI 214 (280)
T ss_dssp CSSCHHHHHTTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTSCEEECCC-CTTCEEEEE
T ss_pred hhHHHHHHhcCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCCCEEECcC-CCCEEEEEc
Confidence 455665554 899999999998654 579999999999999999999999999989999999999 999999999
Q ss_pred Cccccc
Q 045288 230 GDAFLV 235 (236)
Q Consensus 230 Gd~le~ 235 (236)
||+||+
T Consensus 215 GD~l~~ 220 (280)
T 3on7_A 215 GDMLQE 220 (280)
T ss_dssp CHHHHH
T ss_pred ChHHHH
Confidence 999986
No 6
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=2e-53 Score=364.37 Aligned_cols=204 Identities=18% Similarity=0.235 Sum_probs=172.3
Q ss_pred CCCceeeCCCCCCCCCcccHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHhhhCCC-HHHHhhcCCC--CCCc
Q 045288 7 PKLPVVNLSKENLKPGASSWLGTSRKVREALEEFGCFVALYDEVSLELHNAIFSAAEELFNLP-IEIKEKNVSE--KPYY 83 (236)
Q Consensus 7 ~~iPvIDl~~l~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp-~e~K~~~~~~--~~~~ 83 (236)
..||||||+.+ .+++. .++|.+||++||||||+||||+.++++++++++++||+|| .|+|+++... ...+
T Consensus 3 ~~iPvIDls~l--~~~~~-----~~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~ 75 (311)
T 1dcs_A 3 TTVPTFSLAEL--QQGLH-----QDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRR 75 (311)
T ss_dssp CCCCEEEHHHH--HTTCS-----HHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSS
T ss_pred CCCcEEEchhh--cCCCH-----HHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCC
Confidence 47999999985 22222 2399999999999999999999999999999999999999 9999999875 4679
Q ss_pred CccCCCC----------CCCcceeeeeccCCCCcccccCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 045288 84 GYLGNNP----------LVPAIYEGMGVDYANTIEGTQNFTNLIWPEGNENFCKTVVSYSRLVSELEQMVKRMVFESYGV 153 (236)
Q Consensus 84 GY~~~~~----------~~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl 153 (236)
||.+.+. +..||+|+|.++.. +|.|| +++||+.+++|++.|++++..|+++|+++||+
T Consensus 76 Gy~~~~~e~~~~~~~~~~~~d~~E~~~~~~~----------~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl 143 (311)
T 1dcs_A 76 GFTGLESESTAQITNTGSYSDYSMCYSMGTA----------DNLFP--SGDFERIWTQYFDRQYTASRAVAREVLRATGT 143 (311)
T ss_dssp EEEEC-----------------CEEEEECSS----------SCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ceeeccccccccccCCCCCCCcceeeeccCC----------CCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9987653 35699999999864 47899 89999999999999999999999999999999
Q ss_pred ----C-hhhHHhhcCcccceeccccCCCCCCC--C--CcccccccCCCceeEEeeC-CCCc---eeEEcCCCCeEeccCC
Q 045288 154 ----D-KYYDSVLESSTYLLRIMKYRCPETNE--K--NLGCDVHTDKSFITVLHQN-EVNG---LEIRTKDGCWIGFDDP 220 (236)
Q Consensus 154 ----~-~~~~~~~~~~~~~lr~~~Yp~~~~~~--~--~~~~~~HtD~~~lT~L~~~-~~~G---Lqv~~~~g~W~~v~p~ 220 (236)
+ ++|.+. .+.+|++|||||++++ + .+|+++|||+|+||||+|| +++| |||++ +|+|++|+|
T Consensus 144 ~~~~~~~~f~~~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~-~g~W~~V~p- 217 (311)
T 1dcs_A 144 EPDGGVEAFLDC----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEV-GGAFTDLPY- 217 (311)
T ss_dssp CCTTCHHHHHSC----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEE-TTEEEECCC-
T ss_pred CCcCcHhHHhhc----chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEe-CCEEEeCcC-
Confidence 7 676654 7889999999998763 3 7889999999999999999 8999 99987 999999999
Q ss_pred CCCeEEEecCccccc
Q 045288 221 TPSSFIVLAGDAFLV 235 (236)
Q Consensus 221 ~~~~~iVn~Gd~le~ 235 (236)
.||++|||+||+||+
T Consensus 218 ~pg~lvVNiGD~l~~ 232 (311)
T 1dcs_A 218 RPDAVLVFCGAIATL 232 (311)
T ss_dssp CTTCEEEEECHHHHH
T ss_pred CCCeEEEEHHHHHHH
Confidence 999999999999986
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=75.44 E-value=6.8 Score=31.42 Aligned_cols=82 Identities=12% Similarity=0.171 Sum_probs=46.1
Q ss_pred HHHHHHHHHcCCC-hhhHHhhcCcccceeccccCCCCCCCCCcccccccCCC-----------ceeEEee--C----CCC
Q 045288 142 MVKRMVFESYGVD-KYYDSVLESSTYLLRIMKYRCPETNEKNLGCDVHTDKS-----------FITVLHQ--N----EVN 203 (236)
Q Consensus 142 ~ll~~l~~~Lgl~-~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~-----------~lT~L~~--~----~~~ 203 (236)
.|.+.|...|+.. ..+.........-+++++|.+.. ...+|.|.. .+|+++. + +.+
T Consensus 74 ~l~~~i~~~l~~~~~f~~~~L~~~~e~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GG 147 (243)
T 3dkq_A 74 ALGQQIMDRLLAHPQFVSAALPLQFYPPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGG 147 (243)
T ss_dssp HHHHHHHHHHHTCHHHHHHHCEEEEEEEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEEC
T ss_pred HHHHHHHHHHccCcchhhcccccccccceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCc
Confidence 3344444555554 22222222223458889997632 256777753 4666654 2 235
Q ss_pred ceeEEcCCCCeEeccCCCCCeEEEecCc
Q 045288 204 GLEIRTKDGCWIGFDDPTPSSFIVLAGD 231 (236)
Q Consensus 204 GLqv~~~~g~W~~v~p~~~~~~iVn~Gd 231 (236)
.+.+.+..+ =..|.| ..|.+++--..
T Consensus 148 etvf~~~~~-~~~V~P-~~G~~v~F~s~ 173 (243)
T 3dkq_A 148 ELVIQDTYG-QQSIKL-SAGSLVLYPSS 173 (243)
T ss_dssp CEEEEETTE-EEEECC-CTTCEEEEETT
T ss_pred eEEEeeCCC-cEEEec-CCCEEEEECCC
Confidence 666654433 367999 99998886544
No 8
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=72.06 E-value=10 Score=29.72 Aligned_cols=71 Identities=13% Similarity=0.111 Sum_probs=42.5
Q ss_pred HHHHHHHHHHcCCC-hhhHHhhcCcccceeccccCCCCCCCCCcccccccCCC-----------ceeEEee--C-C-CCc
Q 045288 141 QMVKRMVFESYGVD-KYYDSVLESSTYLLRIMKYRCPETNEKNLGCDVHTDKS-----------FITVLHQ--N-E-VNG 204 (236)
Q Consensus 141 ~~ll~~l~~~Lgl~-~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~-----------~lT~L~~--~-~-~~G 204 (236)
..|.+.++..+|++ .. .--+++.+|.+... ..+|.|+. .+|+++. | . .++
T Consensus 93 ~~i~~Ri~~~~gl~~~~--------~E~lqv~~Y~~G~~------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGe 158 (216)
T 3itq_A 93 AKIEKRISSIMNVPASH--------GEGLHILNYEVDQQ------YKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGE 158 (216)
T ss_dssp HHHHHHHHHHHTSCGGG--------BCCCEEEEECBTCC------EEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECC
T ss_pred HHHHHHHHHhcCceecc--------ccceeEEEeCCCCc------cccccCCCcCCCcccCCceEEEEEEecccCCcCce
Confidence 34555556667876 32 13478888976431 46677753 4788876 2 2 234
Q ss_pred eeEEcCCCCeEeccCCCCCeEEEec
Q 045288 205 LEIRTKDGCWIGFDDPTPSSFIVLA 229 (236)
Q Consensus 205 Lqv~~~~g~W~~v~p~~~~~~iVn~ 229 (236)
+.+ ..-+ +.|.| .+|.+++--
T Consensus 159 T~F-p~~~--~~V~P-~~G~al~f~ 179 (216)
T 3itq_A 159 TFF-PKLN--LSVHP-RKGMAVYFE 179 (216)
T ss_dssp EEE-TTTT--EEECC-CTTCEEEEE
T ss_pred eEe-cCCC--CEEec-CCCeEEEEe
Confidence 444 3223 78889 999887753
No 9
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=66.39 E-value=12 Score=29.30 Aligned_cols=72 Identities=11% Similarity=0.138 Sum_probs=40.7
Q ss_pred HHHHHHHHHcCCC-hhhHHhhcCcccceeccccCCCCCCCCCcccccccCC--------------CceeEEee--C--CC
Q 045288 142 MVKRMVFESYGVD-KYYDSVLESSTYLLRIMKYRCPETNEKNLGCDVHTDK--------------SFITVLHQ--N--EV 202 (236)
Q Consensus 142 ~ll~~l~~~Lgl~-~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~--------------~~lT~L~~--~--~~ 202 (236)
.|.+.|+..+|++ .. ..-+++.+|.+.. ...+|.|. ..+|+|+. | ..
T Consensus 81 ~i~~ri~~~~gl~~~~--------~e~~qv~rY~~G~------~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~G 146 (224)
T 2jig_A 81 KIEKRVAQVTMIPLEN--------HEGLQVLHYHDGQ------KYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEG 146 (224)
T ss_dssp HHHHHHHHHHTCCGGG--------BCCCEEEEEETTC------CEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEE
T ss_pred HHHHHHHHHhCCCccc--------ccceEEEecCCCc------cccCcccCCCCccccccccCCCeEEEEEEEecCCCCC
Confidence 3444444556776 32 1247788887632 14566664 25788865 2 12
Q ss_pred CceeEEcCC-----C-------CeEeccCCCCCeEEEe
Q 045288 203 NGLEIRTKD-----G-------CWIGFDDPTPSSFIVL 228 (236)
Q Consensus 203 ~GLqv~~~~-----g-------~W~~v~p~~~~~~iVn 228 (236)
+++.+...+ + .-+.|.| ..|.+|+-
T Consensus 147 GeT~Fp~~~~~~~~~~~~~c~~~~~~V~P-~~G~al~f 183 (224)
T 2jig_A 147 GETVLPNAEQKVTGDGWSECAKRGLAVKP-IKGDALMF 183 (224)
T ss_dssp CCEEETTSSSCCCSTTSCTTGGGSEEECC-CTTCEEEE
T ss_pred CceeCCCcccccccccccccccCceEEec-ccCcEEEE
Confidence 345542211 0 1378999 99988875
No 10
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=50.92 E-value=18 Score=30.52 Aligned_cols=59 Identities=17% Similarity=0.275 Sum_probs=40.8
Q ss_pred cceeccccCCCCCCCCCcccccccCCC------ceeEEeeCCCCceeEEcCCCCeEeccCCCCCeEEEecCcc
Q 045288 166 YLLRIMKYRCPETNEKNLGCDVHTDKS------FITVLHQNEVNGLEIRTKDGCWIGFDDPTPSSFIVLAGDA 232 (236)
Q Consensus 166 ~~lr~~~Yp~~~~~~~~~~~~~HtD~~------~lT~L~~~~~~GLqv~~~~g~W~~v~p~~~~~~iVn~Gd~ 232 (236)
...-+|+|.+ +. ++++|.|.. +.|+=+. ...-+.++.++|.++.+.- .+|+++|+-|+.
T Consensus 198 n~~lvN~Y~~-----G~-~I~~H~D~~~~~~~~I~slSLG-~~~~f~f~~~~~~~~~l~L-~~gsLlvM~G~~ 262 (345)
T 3tht_A 198 DQMTINQYEP-----GQ-GIPAHIDTHSAFEDEIVSLSLG-SEIVMDFKHPDGIAVPVML-PRRSLLVMTGES 262 (345)
T ss_dssp SEEEEEEECT-----TC-CEEEECCCTTTBCSCEEEEEES-SCEEEEEECTTSCEEEEEE-CTTEEEEECTHH
T ss_pred CEEEEEEecC-----CC-CEeeccCCchhcCCeEEEEECC-CceeEEEccCCCceEEEEc-CCCcEEEEChHH
Confidence 4566888876 22 789999984 2233232 2345566556678999999 999999998864
No 11
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=47.90 E-value=6 Score=33.96 Aligned_cols=52 Identities=13% Similarity=0.081 Sum_probs=37.7
Q ss_pred CCceeeCCCCCCCCCcccHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHhhhCC
Q 045288 8 KLPVVNLSKENLKPGASSWLGTSRKVREALEEFGCFVALYDEVSLELHNAIFSAAEELFNL 68 (236)
Q Consensus 8 ~iPvIDl~~l~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~l 68 (236)
++|.||++.+ +.+ .+...++.+++.++|++.+.+.+++.+ ...+.+++|=.+
T Consensus 122 ~~~~~~~~~~-l~~-----d~~~~~~~~~l~~~Gvv~frg~~~~~~---~~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDV-LRY-----DEHAYKWLSTLKKVGIVRLTGASDKPG---EVSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHH-HHC-----HHHHHHHHHHHHHHSEEEEECCCSSTT---HHHHHHHHHSCC
T ss_pred CCCccCHHHH-hcC-----HHHHHHHHHHHHhcCEEEEeCCCCCHH---HHHHHHHHhCCC
Confidence 6899999875 321 346888999999999999999888754 334455665433
No 12
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=47.84 E-value=9.2 Score=29.74 Aligned_cols=37 Identities=16% Similarity=0.257 Sum_probs=28.6
Q ss_pred CCceeeCCCCCCCCCcccHHHHHHHHHHHHHhccEEEEEcCCCC
Q 045288 8 KLPVVNLSKENLKPGASSWLGTSRKVREALEEFGCFVALYDEVS 51 (236)
Q Consensus 8 ~iPvIDl~~l~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~ 51 (236)
.||++++... ++ .++++.+.+++.+.-.+.|.|||+-
T Consensus 125 ~v~~~~y~~~----g~---~~la~~i~~~l~~~~avll~nHG~~ 161 (212)
T 2opi_A 125 EIPVIPYYRP----GS---PELAKAVVEAMLKHNSVLLTNHGQV 161 (212)
T ss_dssp CCCEECCCCT----TC---HHHHHHHHHHTSSCSEEEETTTEEE
T ss_pred CeEEEcCCCC----Cc---HHHHHHHHHHhccCCEEEEcCCCcE
Confidence 6899988652 22 3567888899988889999999973
No 13
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=44.48 E-value=23 Score=28.47 Aligned_cols=48 Identities=8% Similarity=0.077 Sum_probs=33.8
Q ss_pred CCceeeCCCCCCCCCcccHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHhh
Q 045288 8 KLPVVNLSKENLKPGASSWLGTSRKVREALEEFGCFVALYDEVSLELHNAIFSAAEEL 65 (236)
Q Consensus 8 ~iPvIDl~~l~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~f 65 (236)
+|+-||++.+ ++ ....++|.+++.++|++.+.+..++.+. ..+.++.|
T Consensus 17 ei~gvdl~~~-l~------~~~~~~l~~~l~~~Gvv~frg~~~~~~~---~~~~~~~~ 64 (283)
T 1otj_A 17 QISGADLTRP-LS------DNQFEQLYHAVLRHQVVFLRDQAITPQQ---QRALAQRF 64 (283)
T ss_dssp EEESCCSSSC-CC------HHHHHHHHHHHHHHSEEEECSCCCCHHH---HHHHHHTT
T ss_pred EEECCCcCcc-CC------HHHHHHHHHHHHHCCEEEECCCCCCHHH---HHHHHHHh
Confidence 4666777763 21 2358899999999999999998876543 33445554
No 14
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=42.67 E-value=30 Score=18.05 Aligned_cols=19 Identities=16% Similarity=0.036 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHhccEEEE
Q 045288 27 LGTSRKVREALEEFGCFVA 45 (236)
Q Consensus 27 ~~~~~~l~~A~~~~Gff~l 45 (236)
..+++.|.-.|.+-||||-
T Consensus 9 s~LVdaL~~vCgdRGF~~~ 27 (30)
T 1m5a_B 9 SHLVEALYLVCGERGFFYT 27 (30)
T ss_dssp HHHHHHHHHHHGGGCEEEC
T ss_pred HHHHHHHHHHhccCccccC
Confidence 3578888899999999984
No 15
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=42.11 E-value=11 Score=33.08 Aligned_cols=55 Identities=18% Similarity=0.216 Sum_probs=38.8
Q ss_pred CCCCCceeeCCCCCCCCCcccHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHhhhC
Q 045288 5 SVPKLPVVNLSKENLKPGASSWLGTSRKVREALEEFGCFVALYDEVSLELHNAIFSAAEELFN 67 (236)
Q Consensus 5 ~~~~iPvIDl~~l~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 67 (236)
.+.-||.|||+.+ .++. +.+...+.+++.|++.|+|. |+.+.+....+...+|.+
T Consensus 97 G~~~iP~i~f~di--~~~~-----~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 97 GDAVWPVLSYADI--KAGH-----VTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp TCCSSCEEEHHHH--HHTC-----CCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CCCCcceecHHHh--cCCC-----CCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 4678999999885 2221 23455678899999988864 788777777666666653
No 16
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=40.22 E-value=14 Score=28.78 Aligned_cols=37 Identities=16% Similarity=0.110 Sum_probs=28.2
Q ss_pred CCceeeCCCCCCCCCcccHHHHHHHHHHHHHhccEEEEEcCCCC
Q 045288 8 KLPVVNLSKENLKPGASSWLGTSRKVREALEEFGCFVALYDEVS 51 (236)
Q Consensus 8 ~iPvIDl~~l~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~ 51 (236)
.||++++... ++ .++++.+.+++.+.-.+.|.|||+-
T Consensus 122 ~ip~~~y~~~----g~---~~la~~i~~~l~~~~avll~nHG~~ 158 (215)
T 1e4c_P 122 SIPCAPYATF----GT---RELSEHVALALKNRKATLLQHHGLI 158 (215)
T ss_dssp CBCEECCCCT----TC---HHHHHHHHHHTSSCSEEEETTTEEE
T ss_pred CcceeeCCCC----Cc---HHHHHHHHHHhccCCEEEEcCCCcE
Confidence 6888888652 22 3567888889988889999999973
No 17
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=40.16 E-value=16 Score=28.07 Aligned_cols=50 Identities=16% Similarity=0.084 Sum_probs=33.9
Q ss_pred CCcee-eCCCCCCCCCcccHHHHHHHHHHHHHhccEEEEEcCCCC--H------HHHHHHHHHHHh
Q 045288 8 KLPVV-NLSKENLKPGASSWLGTSRKVREALEEFGCFVALYDEVS--L------ELHNAIFSAAEE 64 (236)
Q Consensus 8 ~iPvI-Dl~~l~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~--~------~~~~~~~~~~~~ 64 (236)
.||++ ++... ++ .++++.+.+++.+.-.+.|.|||+- . +.+++++..+..
T Consensus 117 ~ip~~~~y~~~----g~---~ela~~i~~~l~~~~avll~nHG~~~~G~~~~~~~~~~eA~~~~~~ 175 (200)
T 2fk5_A 117 EVPVLAPKTVS----AT---EEAALSVAEALREHRACLLRGHGAFAVGLKEAPEEALLEAYGLMTT 175 (200)
T ss_dssp CEEEECCSCCS----SS---HHHHHHHHHHHHHCSEEEETTTEEEEEECCSSHHHHHHHHHHHHHH
T ss_pred CceEecCCCCC----Cc---HHHHHHHHHHhCcCCEEEECCCCcEEEeCCCCCcCcHHHHHHHHHH
Confidence 68888 77552 22 3567888888888889999999962 2 455666554443
No 18
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=38.63 E-value=53 Score=25.89 Aligned_cols=59 Identities=17% Similarity=0.230 Sum_probs=36.5
Q ss_pred ceeccccCCCCCCCCCcccccccCCC--------ceeEEeeCCCCceeEEcCC----------CCeEeccCCCCCeEEEe
Q 045288 167 LLRIMKYRCPETNEKNLGCDVHTDKS--------FITVLHQNEVNGLEIRTKD----------GCWIGFDDPTPSSFIVL 228 (236)
Q Consensus 167 ~lr~~~Yp~~~~~~~~~~~~~HtD~~--------~lT~L~~~~~~GLqv~~~~----------g~W~~v~p~~~~~~iVn 228 (236)
..-+|+|++. .-++++|.|-. +.|+=+. ...=+.++.+. +..+.+.- .+|.++|+
T Consensus 127 ~~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IaslSLG-~~~~f~f~~~~~~~~~~~~~~~~~~~i~L-~~gsllvM 199 (238)
T 2iuw_A 127 SLLCNLYRNE-----KDSVDWHSDDEPSLGRCPIIASLSFG-ATRTFEMRKKPPPEENGDYTYVERVKIPL-DHGTLLIM 199 (238)
T ss_dssp EEEEEEECST-----TCCEEEECCCCGGGCSSCCEEEEEEE-SCEEEEEEECCC--------CCCEEEEEE-CTTCEEEE
T ss_pred EEEEEEECCC-----CCceeCCcCChhhcCCCCcEEEEECC-CCEEEEEeccCCccccCcccCCceEEEEc-CCCCEEEE
Confidence 4568999763 34689999852 2222232 12233343222 36888998 89999999
Q ss_pred cCcc
Q 045288 229 AGDA 232 (236)
Q Consensus 229 ~Gd~ 232 (236)
-|+.
T Consensus 200 ~G~~ 203 (238)
T 2iuw_A 200 EGAT 203 (238)
T ss_dssp EETH
T ss_pred Chhh
Confidence 8864
No 19
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=37.77 E-value=18 Score=28.61 Aligned_cols=38 Identities=21% Similarity=0.149 Sum_probs=28.8
Q ss_pred CCCceeeCCCCCCCCCcccHHHHHHHHHHHHHhccEEEEEcCCCC
Q 045288 7 PKLPVVNLSKENLKPGASSWLGTSRKVREALEEFGCFVALYDEVS 51 (236)
Q Consensus 7 ~~iPvIDl~~l~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~ 51 (236)
..||++++... ++ .++++++.+++++.-.+.+.|||+-
T Consensus 160 ~~v~~~~y~~~----g~---~ela~~i~~~l~~~~avll~nHG~~ 197 (238)
T 1pvt_A 160 QGISVVEFEKP----GS---VELGLKTVEKSEGKDAVLWDKHGVV 197 (238)
T ss_dssp SCCEEECCCST----TC---HHHHHHHHHHTSSCSEEEETTSCEE
T ss_pred CCceEecCCCC----Cc---HHHHHHHHHHhccCCEEEEcCCCce
Confidence 36889988652 22 3567788888888889999999973
No 20
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=36.98 E-value=36 Score=27.68 Aligned_cols=37 Identities=14% Similarity=-0.028 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHhccEEEEEcCC-CCHHHHHHHHHHHHhhhC
Q 045288 28 GTSRKVREALEEFGCFVALYDE-VSLELHNAIFSAAEELFN 67 (236)
Q Consensus 28 ~~~~~l~~A~~~~Gff~l~nhg-i~~~~~~~~~~~~~~fF~ 67 (236)
...++|.+++.++|++.+.+.. ++. +...+.++.|=.
T Consensus 40 ~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~ 77 (301)
T 1oih_A 40 ATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGE 77 (301)
T ss_dssp HHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCC
Confidence 4578999999999999999987 875 344455565543
No 21
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=32.87 E-value=20 Score=29.11 Aligned_cols=37 Identities=5% Similarity=0.095 Sum_probs=28.4
Q ss_pred CCceeeCCCCCCCCCcccHHHHHHHHHHHHHhccEEEEEcCCCC
Q 045288 8 KLPVVNLSKENLKPGASSWLGTSRKVREALEEFGCFVALYDEVS 51 (236)
Q Consensus 8 ~iPvIDl~~l~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~ 51 (236)
.||++++... ++ .+.++++.+++++.-.+.+.|||+-
T Consensus 179 ~v~v~~y~~~----g~---~ela~~i~~~l~~~~avll~nHG~~ 215 (274)
T 2v9l_A 179 GVGILPWMVP----GT---DAIGQATAQEMQKHSLVLWPFHGVF 215 (274)
T ss_dssp CEEECCCCCS----SS---HHHHHHHHHHHTTCSEEEETTTEEE
T ss_pred ceeEecCCCC----CC---HHHHHHHHHHHccCCEEEEcCCCce
Confidence 6888887542 22 3577888899988889999999973
No 22
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=31.98 E-value=23 Score=28.72 Aligned_cols=38 Identities=5% Similarity=-0.002 Sum_probs=28.3
Q ss_pred CCceeeCCCCCCCCCcccHHHHHHHHHHHHHhccEEEEEcCCCC
Q 045288 8 KLPVVNLSKENLKPGASSWLGTSRKVREALEEFGCFVALYDEVS 51 (236)
Q Consensus 8 ~iPvIDl~~l~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~ 51 (236)
.||++|+..+ .. ..++.+++.+++.+.-.+.|.|||+-
T Consensus 156 ~v~~~~y~~~--~~----~~el~~~i~~~l~~~~avlL~nHG~~ 193 (273)
T 3ocr_A 156 RVAYHGYEGI--AL----DLSERERLVADLGDKSVMILRNHGLL 193 (273)
T ss_dssp TEEEECCCCS--SC----CHHHHHHHHHHHTTCSEEEETTTEEE
T ss_pred CEEEECCCCC--CC----CHHHHHHHHHHhCcCCEEEEcCCceE
Confidence 5888888653 11 13467788889988899999999963
No 23
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=27.98 E-value=52 Score=26.47 Aligned_cols=50 Identities=12% Similarity=0.144 Sum_probs=35.3
Q ss_pred CCCceeeCCCCCCCCCcccHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHhhh
Q 045288 7 PKLPVVNLSKENLKPGASSWLGTSRKVREALEEFGCFVALYDEVSLELHNAIFSAAEELF 66 (236)
Q Consensus 7 ~~iPvIDl~~l~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF 66 (236)
++|.=||++.+ ++ ....++|.+++.++|++.+.+..++.+ ...+.++.|=
T Consensus 14 aei~gvdl~~~-l~------~~~~~~l~~~l~~~gvv~fR~q~l~~~---~~~~fa~~fG 63 (277)
T 3pvj_A 14 AQISGVDISRD-IS------AEERDAIEQALLQHQVLFLRDQPINPE---QQARFAARFG 63 (277)
T ss_dssp EEEESCCTTSC-CC------HHHHHHHHHHHHHHSEEEESSCCCCHH---HHHHHHGGGS
T ss_pred EEEeCCCcccc-CC------HHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhC
Confidence 35666788763 21 246788999999999999999888754 3345566653
No 24
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=27.82 E-value=32 Score=26.37 Aligned_cols=36 Identities=11% Similarity=0.101 Sum_probs=25.4
Q ss_pred CCceeeCCCCCCCCCcccHHHHHHHHHHHHHhcc---EEEEEcCCCC
Q 045288 8 KLPVVNLSKENLKPGASSWLGTSRKVREALEEFG---CFVALYDEVS 51 (236)
Q Consensus 8 ~iPvIDl~~l~~~~~~~~~~~~~~~l~~A~~~~G---ff~l~nhgi~ 51 (236)
.||+++.. ++..++++.+.+++.+.+ .+.|.|||+-
T Consensus 139 ~vp~~~~~--------~g~~~La~~i~~~l~~~~~~~avll~nHG~~ 177 (208)
T 2irp_A 139 KIPIFPNE--------QNIPLLAKEVENYFKTSEDKYGFLIRGHGLY 177 (208)
T ss_dssp EEEEECCC--------SCHHHHHHHHHHHHHHCSCCSCEEETTTEEE
T ss_pred ceeeecCC--------CCHHHHHHHHHHHHhcCCCceEEEEcCCCCe
Confidence 56776652 123467888888888765 7889999973
No 25
>3jsy_A Acidic ribosomal protein P0 homolog; ribonucleoprotein; 1.60A {Methanocaldococcus jannaschii}
Probab=27.80 E-value=1.2e+02 Score=23.47 Aligned_cols=38 Identities=5% Similarity=0.002 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHhccEEEEEc-CCCCHHHHHHHHHHHH
Q 045288 26 WLGTSRKVREALEEFGCFVALY-DEVSLELHNAIFSAAE 63 (236)
Q Consensus 26 ~~~~~~~l~~A~~~~Gff~l~n-hgi~~~~~~~~~~~~~ 63 (236)
+...+++|.+.+.++..++|++ +|+....++++.+..+
T Consensus 5 K~~~v~el~e~l~~~~~v~v~~~~gl~~~ql~~lR~~lr 43 (213)
T 3jsy_A 5 KIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIR 43 (213)
T ss_dssp HHHHHHHHHHHHHHSSEEEEEECCSCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHh
Confidence 4567888888888888777765 6888777766666555
No 26
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=27.48 E-value=62 Score=25.11 Aligned_cols=58 Identities=14% Similarity=0.126 Sum_probs=36.9
Q ss_pred ceeccccCCCCCCCCCcccccccCC-----C--ceeEEeeCCCCceeEEc--CCCCeEeccCCCCCeEEEecCcc
Q 045288 167 LLRIMKYRCPETNEKNLGCDVHTDK-----S--FITVLHQNEVNGLEIRT--KDGCWIGFDDPTPSSFIVLAGDA 232 (236)
Q Consensus 167 ~lr~~~Yp~~~~~~~~~~~~~HtD~-----~--~lT~L~~~~~~GLqv~~--~~g~W~~v~p~~~~~~iVn~Gd~ 232 (236)
..-+|+|.+ +. ++++|.|- + +.|+-+. ...-+.++. +.+....+.- .+|+++|.-|+.
T Consensus 106 ~~LvN~Y~~-----G~-~i~~H~D~~e~~~~~pI~svSLG-~~~~f~f~~~~~~~~~~~i~L-~~GsllvM~G~~ 172 (211)
T 3i3q_A 106 ACLINRYAP-----GA-KLSLHQDKDEPDLRAPIVSVSLG-LPAIFQFGGLKRNDPLKRLLL-EHGDVVVWGGES 172 (211)
T ss_dssp EEEEEEECT-----TC-CEEEECCCCCSCTTSCEEEEEEE-SCEEEEECCSSTTSCCEEEEE-CTTCEEEECGGG
T ss_pred EEEEEEEcC-----CC-CcccccCCCccccCCCEEEEECC-CCeEEEEecccCCCceEEEEC-CCCCEEEECchH
Confidence 355788976 33 79999993 1 2233332 223444432 2356888998 899999998875
No 27
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=27.15 E-value=1.1e+02 Score=25.37 Aligned_cols=41 Identities=24% Similarity=0.169 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHhccEEEEEcCCCC----HHHHHHHHHHHHhhhC
Q 045288 27 LGTSRKVREALEEFGCFVALYDEVS----LELHNAIFSAAEELFN 67 (236)
Q Consensus 27 ~~~~~~l~~A~~~~Gff~l~nhgi~----~~~~~~~~~~~~~fF~ 67 (236)
++..++..+.++.-|++.=.+|||+ .+-+..+.+++++|++
T Consensus 304 e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 304 DKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 3445556666777787666789976 4778888999999875
No 28
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=26.89 E-value=46 Score=26.92 Aligned_cols=37 Identities=16% Similarity=0.212 Sum_probs=21.7
Q ss_pred HHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHhhh
Q 045288 30 SRKVREALEEFGCFVALYDEVSLELHNAIFSAAEELF 66 (236)
Q Consensus 30 ~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF 66 (236)
.++|.++|++.++||-.|-.+...++.++.+.+.++|
T Consensus 112 ~~~L~~aa~~~~vv~a~N~s~Gv~l~~~~~~~aa~~l 148 (272)
T 4f3y_A 112 KAQLRAAGEKIALVFSANMSVGVNVTMKLLEFAAKQF 148 (272)
T ss_dssp HHHHHHHTTTSEEEECSCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhccCCEEEECCCCHHHHHHHHHHHHHHHhc
Confidence 4556666666666666666555555555555555544
No 29
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=26.73 E-value=47 Score=26.38 Aligned_cols=41 Identities=17% Similarity=0.161 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHhhhC
Q 045288 27 LGTSRKVREALEEFGCFVALYDEVSLELHNAIFSAAEELFN 67 (236)
Q Consensus 27 ~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 67 (236)
.+..++|.++|++.++|+--|-.+...++.++.+.+.++|.
T Consensus 88 ~e~~~~l~~aa~~~~v~~a~N~S~Gv~l~~~~~~~aa~~l~ 128 (243)
T 3qy9_A 88 EKLLNKLDELSQNMPVFFSANMSYGVHALTKILAAAVPLLD 128 (243)
T ss_dssp HHHHHHHHHHTTTSEEEECSSCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCEEEECCccHHHHHHHHHHHHHHHhcC
Confidence 34578899999999999999998888888888887777764
No 30
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=26.15 E-value=52 Score=26.90 Aligned_cols=38 Identities=5% Similarity=0.031 Sum_probs=21.9
Q ss_pred HHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHhhhC
Q 045288 30 SRKVREALEEFGCFVALYDEVSLELHNAIFSAAEELFN 67 (236)
Q Consensus 30 ~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 67 (236)
.++|.++|++.++|+--|-.+...++.++.+.+.++|.
T Consensus 127 ~~~L~~aa~~~~~~~a~N~SiGv~ll~~l~~~aa~~l~ 164 (288)
T 3ijp_A 127 EAQIADFAKYTTIVKSGNMSLGVNLLANLVKRAAKALD 164 (288)
T ss_dssp HHHHHHHHTTSEEEECSCCCHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHhCcCCEEEECCCcHHHHHHHHHHHHHHHhcC
Confidence 45566666666666666665555555555555555443
No 31
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=25.52 E-value=1.2e+02 Score=23.16 Aligned_cols=59 Identities=14% Similarity=0.146 Sum_probs=35.9
Q ss_pred ceeccccCCCCCCCCCcccccccCCC--------ceeEEeeCCCCceeEEcC---------CCCeEeccCCCCCeEEEec
Q 045288 167 LLRIMKYRCPETNEKNLGCDVHTDKS--------FITVLHQNEVNGLEIRTK---------DGCWIGFDDPTPSSFIVLA 229 (236)
Q Consensus 167 ~lr~~~Yp~~~~~~~~~~~~~HtD~~--------~lT~L~~~~~~GLqv~~~---------~g~W~~v~p~~~~~~iVn~ 229 (236)
..-+|+|.+. .-++++|.|-. +.++=+. ...-+.++.+ .+..+.+.- .+|.++|+-
T Consensus 101 ~~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IasvSLG-~~~~f~~~~~~~~~~~~~~~~~~~~~~L-~~GsllvM~ 173 (204)
T 3s57_A 101 FVLINRYKDG-----SDHICEHRDDERELAPGSPIASVSFG-ASRDFVFRHKDSRGKSPSRRVAVVRLPL-AHGSLLMMN 173 (204)
T ss_dssp EEEEEEESST-----TCCEEEECCCCTTBCTTCCEEEEEEE-SCEEEEEEEGGGCSSSCSCCCCCEEEEE-CTTEEEEEE
T ss_pred eeEEEEECCC-----CCcccceecChhhccCCCcEEEEECC-CceEEEEEEcCCCccccccCCceEEEEC-CCCCEEEEC
Confidence 3458899763 34688999872 1222222 2233444322 135788888 899999998
Q ss_pred Ccc
Q 045288 230 GDA 232 (236)
Q Consensus 230 Gd~ 232 (236)
|+.
T Consensus 174 g~~ 176 (204)
T 3s57_A 174 HPT 176 (204)
T ss_dssp TTH
T ss_pred chh
Confidence 864
No 32
>1zav_A 50S ribosomal protein L10; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: d.58.62.1 PDB: 1zaw_A 1zax_A
Probab=25.40 E-value=1.7e+02 Score=21.80 Aligned_cols=39 Identities=8% Similarity=-0.078 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHhccEEEEEc-CCCCHHHHHHHHHHHHh
Q 045288 26 WLGTSRKVREALEEFGCFVALY-DEVSLELHNAIFSAAEE 64 (236)
Q Consensus 26 ~~~~~~~l~~A~~~~Gff~l~n-hgi~~~~~~~~~~~~~~ 64 (236)
+...+++|.+.++++..++|++ +|++...+.++....+.
T Consensus 8 K~~~v~el~~~l~~~~~v~v~~~~gltv~q~~~LR~~lr~ 47 (180)
T 1zav_A 8 KELIVKEMSEIFKKTSLILFADFLGFTVADLTELRSRLRE 47 (180)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence 4568889999999999888876 58988777776665553
No 33
>2j01_J 50S ribosomal protein L10; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} PDB: 2j03_J 3d5b_J 3d5d_J 3i8i_Y 3kir_J 3kit_J 3kiw_J 3kiy_J 3mrz_I 3ms1_I 3pyt_I 3pyr_I 3pyo_I 3pyv_I
Probab=24.89 E-value=1.5e+02 Score=21.87 Aligned_cols=38 Identities=16% Similarity=0.155 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHhcc-EEEEEc-CCCCHHHHHHHHHHHH
Q 045288 26 WLGTSRKVREALEEFG-CFVALY-DEVSLELHNAIFSAAE 63 (236)
Q Consensus 26 ~~~~~~~l~~A~~~~G-ff~l~n-hgi~~~~~~~~~~~~~ 63 (236)
+...+++|.+.++++. .++|++ +|++...+.++....+
T Consensus 6 K~~~v~el~~~l~~~~~~v~v~~~~gltv~~~~~LR~~lr 45 (173)
T 2j01_J 6 NVELLATLKENLERAQGSFFLVNYQGLPAKETHALRQALK 45 (173)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEEcCCCCHHHHHHHHHHHH
Confidence 4567888999998888 777765 5888777766666554
No 34
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=21.38 E-value=1e+02 Score=25.11 Aligned_cols=49 Identities=18% Similarity=0.108 Sum_probs=33.9
Q ss_pred CCceeeCCCCCCCCCcccHHHHHHHHHHHHHhccEEEEEcC-CCCHHHHHHHHHHHHhhh
Q 045288 8 KLPVVNLSKENLKPGASSWLGTSRKVREALEEFGCFVALYD-EVSLELHNAIFSAAEELF 66 (236)
Q Consensus 8 ~iPvIDl~~l~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nh-gi~~~~~~~~~~~~~~fF 66 (236)
+|+=||++.. ++ ....++|.+++.++|.+.+.+. .++.+ ...+.++.|=
T Consensus 21 ei~gvdl~~~-L~------d~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG 70 (301)
T 3r1j_A 21 RVDGVRLGGD-LD------DATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLG 70 (301)
T ss_dssp EEESCCCSTT-CC------HHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHS
T ss_pred eEeCCCcccc-CC------HHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcC
Confidence 4556677642 21 3468899999999999999998 77764 3344555553
No 35
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=21.07 E-value=1.2e+02 Score=21.09 Aligned_cols=35 Identities=11% Similarity=0.078 Sum_probs=23.5
Q ss_pred ceeeCCCCCCCCCcccHHHHHHHHHHHHHhccEEEEEcCCCC
Q 045288 10 PVVNLSKENLKPGASSWLGTSRKVREALEEFGCFVALYDEVS 51 (236)
Q Consensus 10 PvIDl~~l~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~ 51 (236)
-|||++.+ .+ .. -...|.+.|+++|+..+-=.|-.
T Consensus 50 VVlDl~~l--~~-~~----dl~~L~~~l~~~gl~~vGV~g~~ 84 (120)
T 3ghf_A 50 VVINVSGL--ES-PV----NWPELHKIVTSTGLRIIGVSGCK 84 (120)
T ss_dssp EEEEEEEC--CS-SC----CHHHHHHHHHTTTCEEEEEESCC
T ss_pred EEEEcccc--CC-hH----HHHHHHHHHHHcCCEEEEEeCCC
Confidence 36799875 21 11 26778899999999988544433
No 36
>2do1_A Nuclear protein HCC-1; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.140.2.1
Probab=20.88 E-value=77 Score=18.96 Aligned_cols=31 Identities=10% Similarity=0.065 Sum_probs=23.2
Q ss_pred HHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHH
Q 045288 30 SRKVREALEEFGCFVALYDEVSLELHNAIFSAAE 63 (236)
Q Consensus 30 ~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~ 63 (236)
+..|.+.|+..| |.-.|.-.++++++.....
T Consensus 15 V~eLK~~L~~rG---L~~~G~KaeLieRL~~~l~ 45 (55)
T 2do1_A 15 LAELKQECLARG---LETKGIKQDLIHRLQAYLE 45 (55)
T ss_dssp HHHHHHHHHHHT---CCCCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC---CCCCCcHHHHHHHHHHHHh
Confidence 788999999999 4446677788888776543
No 37
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=20.22 E-value=1.1e+02 Score=17.66 Aligned_cols=22 Identities=18% Similarity=0.191 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHcCCC-hh
Q 045288 135 LVSELEQMVKRMVFESYGVD-KY 156 (236)
Q Consensus 135 ~~~~l~~~ll~~l~~~Lgl~-~~ 156 (236)
.-.+++..|.+++++.||.+ +.
T Consensus 18 ~k~~l~~~l~~~l~~~lg~p~~~ 40 (63)
T 2x4k_A 18 QLKNLVSEVTDAVEKTTGANRQA 40 (63)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCcCccc
Confidence 34678888999999999999 54
Done!