BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045289
(71 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VYK4|NFYB8_ARATH Nuclear transcription factor Y subunit B-8 OS=Arabidopsis
thaliana GN=NFYB8 PE=2 SV=1
Length = 173
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 32/39 (82%)
Query: 11 NIQEEDRYLPIANISWIIKKAFPANDIITKNAKQIVQGC 49
+++E+DR+LPIANIS I+K+ PAN I K+AK+IVQ C
Sbjct: 27 HVREQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQEC 65
>sp|O23310|NFYB3_ARATH Nuclear transcription factor Y subunit B-3 OS=Arabidopsis
thaliana GN=NFYB3 PE=2 SV=1
Length = 161
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 7/56 (12%)
Query: 1 MAKSESDSRSN-------IQEEDRYLPIANISWIIKKAFPANDIITKNAKQIVQGC 49
MA S++DS + +E+DR+LPIAN+S I+KKA PAN I+K+AK+ VQ C
Sbjct: 1 MADSDNDSGGHKDGGNASTREQDRFLPIANVSRIMKKALPANAKISKDAKETVQEC 56
>sp|Q9SLG0|NFYB1_ARATH Nuclear transcription factor Y subunit B-1 OS=Arabidopsis
thaliana GN=NFYB1 PE=1 SV=2
Length = 141
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 33/48 (68%)
Query: 2 AKSESDSRSNIQEEDRYLPIANISWIIKKAFPANDIITKNAKQIVQGC 49
A +S +++E+DRYLPIANIS I+KKA P N I K+AK VQ C
Sbjct: 9 AGDGGESGGSVREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQEC 56
>sp|P25209|NFYB_MAIZE Nuclear transcription factor Y subunit B OS=Zea mays GN=NFY2 PE=2
SV=1
Length = 179
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 12 IQEEDRYLPIANISWIIKKAFPANDIITKNAKQIVQGC 49
++E+DR+LPIANIS I+KKA PAN I K+AK+ VQ C
Sbjct: 29 VREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQEC 66
>sp|Q5QMG3|NFYB2_ORYSJ Nuclear transcription factor Y subunit B-2 OS=Oryza sativa subsp.
japonica GN=NFYB2 PE=2 SV=1
Length = 178
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 4 SESDSRSN-IQEEDRYLPIANISWIIKKAFPANDIITKNAKQIVQGC 49
S S RS ++E+DR+LPIANIS I+KKA PAN I K+AK+ +Q C
Sbjct: 23 SGSPPRSGGVREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQEC 69
>sp|Q60EQ4|NFYB3_ORYSJ Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp.
japonica GN=NFYB3 PE=1 SV=2
Length = 185
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 12 IQEEDRYLPIANISWIIKKAFPANDIITKNAKQIVQGC 49
++E+DR+LPIANIS I+KKA PAN I K+AK+ VQ C
Sbjct: 36 VREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQEC 73
>sp|Q67XJ2|NFYBA_ARATH Nuclear transcription factor Y subunit B-10 OS=Arabidopsis
thaliana GN=NFYB10 PE=2 SV=1
Length = 176
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 30/39 (76%)
Query: 11 NIQEEDRYLPIANISWIIKKAFPANDIITKNAKQIVQGC 49
N++E+DR+LPIANIS I+K+ P N I K+AK+ +Q C
Sbjct: 26 NVREQDRFLPIANISRIMKRGLPLNGKIAKDAKETMQEC 64
>sp|Q9FGJ3|NFYB2_ARATH Nuclear transcription factor Y subunit B-2 OS=Arabidopsis
thaliana GN=NFYB2 PE=2 SV=1
Length = 190
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 13 QEEDRYLPIANISWIIKKAFPANDIITKNAKQIVQGC 49
+E+DR+LPIAN+S I+KKA PAN I+K+AK+ +Q C
Sbjct: 26 REQDRFLPIANVSRIMKKALPANAKISKDAKETMQEC 62
>sp|Q54WV0|NFYB_DICDI Nuclear transcription factor Y subunit beta OS=Dictyostelium
discoideum GN=nfyB PE=3 SV=1
Length = 490
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 28/37 (75%)
Query: 13 QEEDRYLPIANISWIIKKAFPANDIITKNAKQIVQGC 49
+E+DRYLPIANI I+KKA P N + K+AK+ VQ C
Sbjct: 47 REQDRYLPIANIIRIMKKALPNNAKVAKDAKETVQDC 83
>sp|Q9SIT9|NFYB7_ARATH Nuclear transcription factor Y subunit B-7 OS=Arabidopsis
thaliana GN=NFYB7 PE=2 SV=1
Length = 215
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 13 QEEDRYLPIANISWIIKKAFPANDIITKNAKQIVQGC 49
+E+DR+LPIAN+ I+KK P N I+K+AK+ VQ C
Sbjct: 35 KEQDRFLPIANVGRIMKKVLPGNGKISKDAKETVQEC 71
>sp|Q65XK1|NFYB4_ORYSJ Nuclear transcription factor Y subunit B-4 OS=Oryza sativa subsp.
japonica GN=NFYB4 PE=2 SV=2
Length = 143
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 13 QEEDRYLPIANISWIIKKAFPANDIITKNAKQIVQGC 49
+E+DR+LPIANI I+++A P N I K++K+ VQ C
Sbjct: 21 KEQDRFLPIANIGRIMRRAVPENGKIAKDSKESVQEC 57
>sp|O04027|NFYB4_ARATH Nuclear transcription factor Y subunit B-4 OS=Arabidopsis
thaliana GN=NFYB4 PE=1 SV=1
Length = 139
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 12 IQEEDRYLPIANISWIIKKAFPANDIITKNAKQIVQGCS 50
+ +EDR LPIAN+ ++K+ P+N I+K AKQ VQ C+
Sbjct: 1 MTDEDRLLPIANVGRLMKQILPSNAKISKEAKQTVQECA 39
>sp|Q6RG77|NFYB_HORSE Nuclear transcription factor Y subunit beta OS=Equus caballus
GN=NFYB PE=2 SV=1
Length = 207
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 8 SRSNIQEEDRYLPIANISWIIKKAFPANDIITKNAKQIVQGC 49
S+ + +E+D YLPIAN++ I+K A P I K+AK+ VQ C
Sbjct: 48 SKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQEC 89
>sp|P63140|NFYB_RAT Nuclear transcription factor Y subunit beta OS=Rattus norvegicus
GN=Nfyb PE=1 SV=1
Length = 207
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 8 SRSNIQEEDRYLPIANISWIIKKAFPANDIITKNAKQIVQGC 49
S+ + +E+D YLPIAN++ I+K A P I K+AK+ VQ C
Sbjct: 48 SKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQEC 89
>sp|P63139|NFYB_MOUSE Nuclear transcription factor Y subunit beta OS=Mus musculus
GN=Nfyb PE=1 SV=1
Length = 207
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 8 SRSNIQEEDRYLPIANISWIIKKAFPANDIITKNAKQIVQGC 49
S+ + +E+D YLPIAN++ I+K A P I K+AK+ VQ C
Sbjct: 48 SKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQEC 89
>sp|P25208|NFYB_HUMAN Nuclear transcription factor Y subunit beta OS=Homo sapiens
GN=NFYB PE=1 SV=2
Length = 207
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 8 SRSNIQEEDRYLPIANISWIIKKAFPANDIITKNAKQIVQGC 49
S+ + +E+D YLPIAN++ I+K A P I K+AK+ VQ C
Sbjct: 48 SKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQEC 89
>sp|Q32KW0|NFYB_BOVIN Nuclear transcription factor Y subunit beta OS=Bos taurus GN=NFYB
PE=2 SV=1
Length = 207
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 8 SRSNIQEEDRYLPIANISWIIKKAFPANDIITKNAKQIVQGC 49
S+ + +E+D YLPIAN++ I+K A P I K+AK+ VQ C
Sbjct: 48 SKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQEC 89
>sp|P25207|NFYB_CHICK Nuclear transcription factor Y subunit beta OS=Gallus gallus
GN=NFYB PE=2 SV=2
Length = 205
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 8 SRSNIQEEDRYLPIANISWIIKKAFPANDIITKNAKQIVQGC 49
S+ + +E+D YLPIAN++ I+K A P I K+AK+ VQ C
Sbjct: 46 SKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQEC 87
>sp|O82248|NFYB5_ARATH Nuclear transcription factor Y subunit B-5 OS=Arabidopsis
thaliana GN=NFYB5 PE=2 SV=1
Length = 160
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 12 IQEEDRYLPIANISWIIKKAFPANDIITKNAKQIVQGC 49
++E+DR LPIAN+ I+K PAN ++K AK+ +Q C
Sbjct: 49 VKEQDRLLPIANVGRIMKNILPANAKVSKEAKETMQEC 86
>sp|P25210|NFYB_PETMA Nuclear transcription factor Y subunit beta OS=Petromyzon marinus
GN=NFYB PE=2 SV=1
Length = 209
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 8 SRSNIQEEDRYLPIANISWIIKKAFPANDIITKNAKQIVQGC 49
S+ +E+D YLPIAN++ I+K + P++ I K+AK+ VQ C
Sbjct: 49 SKDPYREQDIYLPIANVARIMKTSIPSSGKIAKDAKECVQEC 90
>sp|Q9SFD8|NFYB9_ARATH Nuclear transcription factor Y subunit B-9 OS=Arabidopsis
thaliana GN=NFYB9 PE=1 SV=2
Length = 238
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 28/37 (75%)
Query: 13 QEEDRYLPIANISWIIKKAFPANDIITKNAKQIVQGC 49
+E+D+Y+PIAN+ I++K P++ I+ +AK+ +Q C
Sbjct: 58 REQDQYMPIANVIRIMRKTLPSHAKISDDAKETIQEC 94
>sp|Q84W66|NFYB6_ARATH Nuclear transcription factor Y subunit B-6 OS=Arabidopsis
thaliana GN=NFYB6 PE=1 SV=2
Length = 234
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 30/43 (69%)
Query: 7 DSRSNIQEEDRYLPIANISWIIKKAFPANDIITKNAKQIVQGC 49
+ ++E+DR++PIAN+ I+++ PA+ I+ ++K+ +Q C
Sbjct: 51 EEECTVREQDRFMPIANVIRIMRRILPAHAKISDDSKETIQEC 93
>sp|P40914|HAP3_KLULA Transcriptional activator HAP3 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=HAP3 PE=3 SV=1
Length = 205
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 27/38 (71%)
Query: 12 IQEEDRYLPIANISWIIKKAFPANDIITKNAKQIVQGC 49
+ E+DR+LPI N++ ++K PA ++K+AK+ +Q C
Sbjct: 20 LAEQDRWLPINNVARLMKNTLPATTKVSKDAKECMQEC 57
>sp|P13434|HAP3_YEAST Transcriptional activator HAP3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=HAP3 PE=1 SV=1
Length = 144
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 29/40 (72%)
Query: 10 SNIQEEDRYLPIANISWIIKKAFPANDIITKNAKQIVQGC 49
S ++E+DR+LPI N++ ++K P + ++K+AK+ +Q C
Sbjct: 33 STLREQDRWLPINNVARLMKNTLPPSAKVSKDAKECMQEC 72
>sp|P36611|HAP3_SCHPO Transcriptional activator hap3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=hap3 PE=3 SV=1
Length = 116
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 19 LPIANISWIIKKAFPANDIITKNAKQIVQGC 49
LPIAN++ I+K A P N I+K AK VQ C
Sbjct: 12 LPIANVARIMKSALPENAKISKEAKDCVQDC 42
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.129 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,490,917
Number of Sequences: 539616
Number of extensions: 717085
Number of successful extensions: 1158
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1133
Number of HSP's gapped (non-prelim): 25
length of query: 71
length of database: 191,569,459
effective HSP length: 43
effective length of query: 28
effective length of database: 168,365,971
effective search space: 4714247188
effective search space used: 4714247188
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)