Your job contains 1 sequence.
>045292
MFQPNTFESHHMFDMTRRSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRK
RYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERH
ENQILKAENQKLRAENNRYKEALGNATCPNCGGPAALGEMSFDEQHLRIENARLREEIDR
ISGIAAKYVGKPLSSFPHLTPRSLDLGFTNLGTQSGFVGEMYGGCDLIRSISGPSEADKP
MIVELAVAAMEEFLRMAQAGDPLWTDQNQWSSVFCGIVSRAMTIEVLSTGVAGNYNGALQ
VMTAEFQVPSPLVPTRENYFVRYCKQHSDGTWAVVDVSLDNLRPSPTSKCRRRPSGCLIQ
ELPNGYSKVIWVEHVEVDDRSVHNIYKPLVNSGLAFGAKRWVATLDRQCERLASSMANNI
PAGDLCVITSPEGRKSMLKLAERMVTSFCTGVGASTAHAWTTLSATGSDDVRVMTRKSMD
DPGRPPGIVLSAATSFWIPVPPRRIFDFLRDENSRSEWDILSNGGLVQEMAHIANGRDPG
NCVSLLRVNSANSSQSNMLVLQESCTDSTGSYVIYAPVDIVAMNMVLSGGDPDYVALLPS
GFAILPDGPGFNGGGILEVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVER
IKAAVMTDNASCR
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 045292
(673 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2119048 - symbol:ATML1 "AT4G21750" species:370... 1659 2.7e-297 3
TAIR|locus:2135368 - symbol:PDF2 "AT4G04890" species:3702... 1771 1.4e-293 2
TAIR|locus:2207235 - symbol:HDG2 "AT1G05230" species:3702... 1684 7.8e-260 2
TAIR|locus:2127008 - symbol:ANL2 "ANTHOCYANINLESS 2" spec... 1187 7.9e-181 2
TAIR|locus:2098866 - symbol:HDG1 "AT3G61150" species:3702... 1141 2.6e-171 2
TAIR|locus:2062540 - symbol:HDG3 "AT2G32370" species:3702... 1074 1.3e-165 2
TAIR|locus:2206880 - symbol:HDG11 "AT1G73360" species:370... 973 6.5e-151 2
TAIR|locus:2030913 - symbol:HDG12 "homeodomain GLABROUS 1... 938 2.9e-148 2
TAIR|locus:2145116 - symbol:HDG7 "AT5G52170" species:3702... 1406 7.5e-144 1
TAIR|locus:2129396 - symbol:HDG4 "AT4G17710" species:3702... 812 1.3e-119 3
TAIR|locus:2097770 - symbol:HDG8 "AT3G03260" species:3702... 738 8.9e-113 2
TAIR|locus:2167230 - symbol:HDG9 "AT5G17320" species:3702... 628 4.4e-101 3
TAIR|locus:2131814 - symbol:FWA "AT4G25530" species:3702 ... 735 1.8e-99 2
TAIR|locus:2023932 - symbol:HDG10 "AT1G34650" species:370... 601 3.3e-93 3
TAIR|locus:2182850 - symbol:AT5G07260 "AT5G07260" species... 317 1.1e-30 2
TAIR|locus:2061544 - symbol:PHB "AT2G34710" species:3702 ... 190 3.5e-22 3
TAIR|locus:2028140 - symbol:PHV "AT1G30490" species:3702 ... 172 5.9e-21 3
TAIR|locus:2175856 - symbol:REV "AT5G60690" species:3702 ... 161 9.6e-20 3
TAIR|locus:2134088 - symbol:HB-8 "AT4G32880" species:3702... 164 7.4e-19 3
TAIR|locus:2034086 - symbol:ATHB-15 "AT1G52150" species:3... 162 3.2e-18 3
TAIR|locus:2116442 - symbol:AT4G26920 "AT4G26920" species... 147 1.2e-11 2
UNIPROTKB|H0YJ32 - symbol:SHOX2 "Short stature homeobox p... 143 7.2e-09 1
UNIPROTKB|H0YLI9 - symbol:SHOX "Short stature homeobox pr... 149 3.8e-08 1
TAIR|locus:2202795 - symbol:AtHB23 "homeobox protein 23" ... 136 1.4e-07 2
UNIPROTKB|F1Q361 - symbol:SHOX "Uncharacterized protein" ... 149 1.5e-07 1
UNIPROTKB|O15266 - symbol:SHOX "Short stature homeobox pr... 149 1.5e-07 1
UNIPROTKB|F1N4F7 - symbol:LMX1B "Uncharacterized protein"... 149 1.5e-07 1
UNIPROTKB|F1RS26 - symbol:LMX1B "Uncharacterized protein"... 149 1.5e-07 1
UNIPROTKB|H0YMR3 - symbol:SHOX "Short stature homeobox pr... 149 1.6e-07 2
RGD|2320224 - symbol:LOC100364841 "rCG53272-like" species... 130 1.8e-07 1
UNIPROTKB|J9NU69 - symbol:LMX1B "Uncharacterized protein"... 149 2.1e-07 1
MGI|MGI:1100513 - symbol:Lmx1b "LIM homeobox transcriptio... 149 2.8e-07 1
UNIPROTKB|G3V877 - symbol:Lmx1b "LIM homeobox transcripti... 149 2.8e-07 1
UNIPROTKB|O60663 - symbol:LMX1B "LIM homeobox transcripti... 149 2.9e-07 1
ZFIN|ZDB-GENE-030131-4340 - symbol:nkx2.9 "NK2 transcript... 128 2.9e-07 1
RGD|3674 - symbol:Shox2 "short stature homeobox 2" specie... 143 3.1e-07 1
UNIPROTKB|O35750 - symbol:Shox2 "Short stature homeobox p... 143 3.1e-07 1
UNIPROTKB|F8VYP0 - symbol:LMX1B "LIM homeobox transcripti... 149 3.2e-07 1
UNIPROTKB|F1NFE6 - symbol:SHOX "Uncharacterized protein" ... 141 3.4e-07 1
UNIPROTKB|F1NR49 - symbol:NKX2-6 "Uncharacterized protein... 113 4.0e-07 2
UNIPROTKB|K7GS77 - symbol:LOC100520816 "Uncharacterized p... 145 4.2e-07 1
UNIPROTKB|F1SG33 - symbol:LOC100520816 "Uncharacterized p... 145 4.5e-07 1
UNIPROTKB|B7ZLH2 - symbol:LMX1B "LMX1B protein" species:9... 147 4.9e-07 1
UNIPROTKB|A6NLG4 - symbol:SHOX2 "cDNA FLJ38019 fis, clone... 134 5.3e-07 1
UNIPROTKB|Q8UVR3 - symbol:lmx1b.1 "LIM homeobox transcrip... 147 5.4e-07 1
UNIPROTKB|F8W7W6 - symbol:LMX1B "LIM homeobox transcripti... 147 5.5e-07 1
ZFIN|ZDB-GENE-040426-1457 - symbol:shox2 "short stature h... 144 5.8e-07 1
UNIPROTKB|D6RBG8 - symbol:PITX2 "Pituitary homeobox 2" sp... 125 6.1e-07 1
WB|WBGene00006778 - symbol:unc-42 species:6239 "Caenorhab... 141 8.5e-07 1
UNIPROTKB|F1PF43 - symbol:VAX2 "Uncharacterized protein" ... 140 8.6e-07 1
UNIPROTKB|F6Y4K5 - symbol:SHOX2 "Uncharacterized protein"... 143 9.0e-07 1
UNIPROTKB|I3L828 - symbol:SHOX2 "Uncharacterized protein"... 143 9.2e-07 1
UNIPROTKB|E1BLB9 - symbol:E1BLB9 "Uncharacterized protein... 143 9.9e-07 1
UNIPROTKB|O60902 - symbol:SHOX2 "Short stature homeobox p... 143 9.9e-07 1
TAIR|locus:2062754 - symbol:HB-7 "homeobox 7" species:370... 140 1.0e-06 1
UNIPROTKB|G3X7M1 - symbol:SHOX "Uncharacterized protein" ... 142 1.0e-06 1
UNIPROTKB|Q8NHV9 - symbol:RHOXF1 "Rhox homeobox family me... 130 1.3e-06 1
MGI|MGI:1201673 - symbol:Shox2 "short stature homeobox 2"... 140 2.1e-06 1
UNIPROTKB|F1NDZ5 - symbol:LMX1B "LIM/homeobox protein LMX... 141 2.2e-06 1
UNIPROTKB|P53413 - symbol:LMX1B "LIM/homeobox protein LMX... 141 2.2e-06 1
ZFIN|ZDB-GENE-051030-21 - symbol:shox "short stature home... 139 2.2e-06 1
UNIPROTKB|F1NU45 - symbol:NKX2-6 "Uncharacterized protein... 113 2.4e-06 2
UNIPROTKB|E1BBM6 - symbol:VAX2 "Uncharacterized protein" ... 138 2.4e-06 1
FB|FBgn0025334 - symbol:PHDP "Putative homeodomain protei... 134 2.5e-06 1
FB|FBgn0014949 - symbol:btn "buttonless" species:7227 "Dr... 119 2.7e-06 1
RGD|1563291 - symbol:Rhox10 "reproductive homeobox 10" sp... 131 3.2e-06 1
RGD|1595784 - symbol:Hoxc9 "homeobox C9" species:10116 "R... 118 3.5e-06 1
UNIPROTKB|P18866 - symbol:Hoxc8 "Homeobox protein Hox-C8"... 118 3.5e-06 1
TAIR|locus:2079542 - symbol:HB-12 "homeobox 12" species:3... 134 3.5e-06 1
WB|WBGene00000445 - symbol:ceh-22 species:6239 "Caenorhab... 138 3.9e-06 1
UNIPROTKB|E2RRG5 - symbol:PITX1 "Uncharacterized protein"... 137 4.0e-06 1
RGD|69253 - symbol:Pitx1 "paired-like homeodomain 1" spec... 137 4.1e-06 1
UNIPROTKB|Q8N693 - symbol:ESX1 "Homeobox protein ESX1" sp... 139 4.2e-06 1
MGI|MGI:1346018 - symbol:Vax2 "ventral anterior homeobox ... 136 4.3e-06 1
UNIPROTKB|F1MU46 - symbol:PITX1 "Uncharacterized protein"... 136 5.2e-06 1
UNIPROTKB|Q9UIW0 - symbol:VAX2 "Ventral anterior homeobox... 135 5.6e-06 1
TAIR|locus:2170194 - symbol:HAT14 "homeobox from Arabidop... 134 5.6e-06 2
RGD|1586211 - symbol:Hoxb8 "homeo box B8" species:10116 "... 116 5.7e-06 1
RGD|2301305 - symbol:Rhox3 "reproductive homeobox on X ch... 116 5.7e-06 1
WB|WBGene00000430 - symbol:ceh-5 species:6239 "Caenorhabd... 116 5.7e-06 1
RGD|621133 - symbol:Vax2 "ventral anterior homeobox 2" sp... 135 5.7e-06 1
UNIPROTKB|Q9JLZ9 - symbol:Vax2 "Ventral anterior homeobox... 135 5.7e-06 1
ZFIN|ZDB-GENE-041014-332 - symbol:lmx1a "LIM homeobox tra... 137 5.7e-06 1
ZFIN|ZDB-GENE-990415-237 - symbol:rx2 "retinal homeobox g... 136 5.8e-06 1
UNIPROTKB|E2QZN5 - symbol:SHOX2 "Uncharacterized protein"... 136 6.1e-06 1
TAIR|locus:2137599 - symbol:HAT22 species:3702 "Arabidops... 134 6.4e-06 1
UNIPROTKB|Q9PVX0 - symbol:RX2 "Retinal homeobox protein R... 135 7.0e-06 1
UNIPROTKB|F1RSD4 - symbol:PRRX1 "Uncharacterized protein"... 115 7.2e-06 1
UNIPROTKB|E1C654 - symbol:VAX1 "Ventral anterior homeobox... 130 7.5e-06 1
UNIPROTKB|F1P5G0 - symbol:VAX1 "Ventral anterior homeobox... 130 7.7e-06 1
UNIPROTKB|E1BBR5 - symbol:PITX3 "Uncharacterized protein"... 134 8.0e-06 1
ZFIN|ZDB-GENE-030904-8 - symbol:vax2 "ventral anterior ho... 134 8.3e-06 1
UNIPROTKB|Q9PU20 - symbol:vax2-a "Ventral anterior homeob... 135 8.7e-06 2
UNIPROTKB|A6NLW8 - symbol:DUXA "Double homeobox protein A... 128 8.8e-06 1
ZFIN|ZDB-GENE-060421-3623 - symbol:pitx1 "paired-like hom... 133 8.9e-06 1
UNIPROTKB|F1S139 - symbol:PITX2 "Uncharacterized protein"... 128 9.0e-06 2
RGD|1564332 - symbol:Rhox11 "reproductive homeobox 11" sp... 129 9.2e-06 1
ZFIN|ZDB-GENE-030904-9 - symbol:vax1 "ventral anterior ho... 132 9.3e-06 2
UNIPROTKB|F1NVB2 - symbol:TLX3 "T-cell leukemia homeobox ... 114 9.3e-06 1
UNIPROTKB|F1P4U9 - symbol:HOXD8 "Homeobox protein Hox-D8"... 114 9.3e-06 1
WARNING: Descriptions of 286 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2119048 [details] [associations]
symbol:ATML1 "AT4G21750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0009913 "epidermal cell differentiation"
evidence=IGI] [GO:0048825 "cotyledon development" evidence=IGI]
[GO:0006473 "protein acetylation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010075
"regulation of meristem growth" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 EMBL:AL161555 HSSP:Q6B2C0 EMBL:U37589
EMBL:AL035527 EMBL:AY091104 EMBL:AY150491 EMBL:AK229970
IPI:IPI00535360 PIR:T05850 RefSeq:NP_001031692.1 RefSeq:NP_193906.2
UniGene:At.2706 ProteinModelPortal:Q8RWU4 SMR:Q8RWU4 STRING:Q8RWU4
PRIDE:Q8RWU4 EnsemblPlants:AT4G21750.1 EnsemblPlants:AT4G21750.2
GeneID:828263 KEGG:ath:AT4G21750 TAIR:At4g21750 eggNOG:NOG261733
InParanoid:Q8RWU4 OMA:HAWTTLS PhylomeDB:Q8RWU4
ProtClustDB:CLSN2681990 Genevestigator:Q8RWU4 GO:GO:0048825
GO:GO:0009913 Uniprot:Q8RWU4
Length = 762
Score = 1659 (589.1 bits), Expect = 2.7e-297, Sum P(3) = 2.7e-297
Identities = 313/343 (91%), Positives = 329/343 (95%)
Query: 266 DQNQWSSVFCGIVSRAMTIEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCK 325
D NQWSSVFCGIVSRA+T+EVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCK
Sbjct: 336 DVNQWSSVFCGIVSRALTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCK 395
Query: 326 QHSDGTWAVVDVSLDNLRPSPTSKCRRRPSGCLIQELPNGYSKVIWVEHVEVDDRSVHNI 385
QHSDG WAVVDVSLD+LRPSP ++ RRRPSGCLIQEL NGYSKV WVEH+EVDDRSVHN+
Sbjct: 396 QHSDGIWAVVDVSLDSLRPSPITRSRRRPSGCLIQELQNGYSKVTWVEHIEVDDRSVHNM 455
Query: 386 YKPLVNSGLAFGAKRWVATLDRQCERLASSMANNIPAGDLCVITSPEGRKSMLKLAERMV 445
YKPLVN+GLAFGAKRWVATLDRQCERLASSMA+NIPA DL VITSPEGRKSMLKLAERMV
Sbjct: 456 YKPLVNTGLAFGAKRWVATLDRQCERLASSMASNIPACDLSVITSPEGRKSMLKLAERMV 515
Query: 446 TSFCTGVGASTAHAWTTLSATGSDDVRVMTRKSMDDPGRPPGIVLSAATSFWIPVPPRRI 505
SFCTGVGASTAHAWTTLS TGSDDVRVMTRKSMDDPGRPPGIVLSAATSFWIPV P+R+
Sbjct: 516 MSFCTGVGASTAHAWTTLSTTGSDDVRVMTRKSMDDPGRPPGIVLSAATSFWIPVAPKRV 575
Query: 506 FDFLRDENSRSEWDILSNGGLVQEMAHIANGRDPGNCVSLLRVNSANSSQSNMLVLQESC 565
FDFLRDENSRSEWDILSNGGLVQEMAHIANGRDPGN VSLLRVNS NS QSNML+LQESC
Sbjct: 576 FDFLRDENSRSEWDILSNGGLVQEMAHIANGRDPGNSVSLLRVNSGNSGQSNMLILQESC 635
Query: 566 TDSTGSYVIYAPVDIVAMNMVLSGGDPDYVALLPSGFAILPDG 608
TD++GSYVIYAPVDI+AMN+VLSGGDPDYVALLPSGFAILPDG
Sbjct: 636 TDASGSYVIYAPVDIIAMNVVLSGGDPDYVALLPSGFAILPDG 678
Score = 1050 (374.7 bits), Expect = 2.7e-297, Sum P(3) = 2.7e-297
Identities = 211/287 (73%), Positives = 236/287 (82%)
Query: 1 MFQPNTFESHH-MFDMTRRSSESDLGKL--KEDDYETKSGTETMEMEAPSGDD-QDPSQH 56
M+ PN FESHH MFDMT ++SE+DLG E+D+ETKSG E + ME P ++ QDP+Q
Sbjct: 1 MYHPNMFESHHHMFDMTPKNSENDLGITGSHEEDFETKSGAE-VTMENPLEEELQDPNQR 59
Query: 57 P-KRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKA 115
P K+KRYHRHTQRQIQE+E+FFKECPHPDDKQRKELSREL LEPLQVKFWFQNKRTQMKA
Sbjct: 60 PNKKKRYHRHTQRQIQELESFFKECPHPDDKQRKELSRELSLEPLQVKFWFQNKRTQMKA 119
Query: 116 QHERHENQILKAENQKLRAENNRYKEALGNATCPNCGGPAALGEMSFDEQHLRIENARLR 175
QHERHENQILK+EN KLRAENNRYK+AL NATCPNCGGPAA+GEMSFDEQHLRIENARLR
Sbjct: 120 QHERHENQILKSENDKLRAENNRYKDALSNATCPNCGGPAAIGEMSFDEQHLRIENARLR 179
Query: 176 EEIDRISGIAAKYVGKPL----SSFP------HLTPRSLDLGFTNLG----TQSGFVGEM 221
EEIDRIS IAAKYVGKPL SSFP H+ RSLDL N G + +GFVGEM
Sbjct: 180 EEIDRISAIAAKYVGKPLMANSSSFPQLSSSHHIPSRSLDLEVGNFGNNNNSHTGFVGEM 239
Query: 222 YGGCDLIRSISGPSEADKPMIVELAVAAMEEFLRMAQAGDPLWTDQN 268
+G D++RS+S PSEADKPMIVELAVAAMEE +RMAQ GDPLW +
Sbjct: 240 FGSSDILRSVSIPSEADKPMIVELAVAAMEELVRMAQTGDPLWVSSD 286
Score = 187 (70.9 bits), Expect = 2.7e-297, Sum P(3) = 2.7e-297
Identities = 40/44 (90%), Positives = 41/44 (93%)
Query: 627 TVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAAVMTDNA 670
TVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAA+ D A
Sbjct: 719 TVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAALACDGA 762
>TAIR|locus:2135368 [details] [associations]
symbol:PDF2 "AT4G04890" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009913 "epidermal cell differentiation"
evidence=IMP] [GO:0048825 "cotyledon development" evidence=IGI]
[GO:0006473 "protein acetylation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 EMBL:AL161502 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338 HSSP:Q6B2C0
eggNOG:NOG261733 ProtClustDB:CLSN2681990 GO:GO:0048825
GO:GO:0009913 EMBL:AF128393 EMBL:AB056455 EMBL:AF424560
EMBL:AY062575 EMBL:BT000144 IPI:IPI00536198 PIR:E85061
RefSeq:NP_567274.1 UniGene:At.4047 ProteinModelPortal:Q93V99
SMR:Q93V99 IntAct:Q93V99 PaxDb:Q93V99 PRIDE:Q93V99
EnsemblPlants:AT4G04890.1 GeneID:825828 KEGG:ath:AT4G04890
TAIR:At4g04890 InParanoid:Q93V99 OMA:MIPARHM PhylomeDB:Q93V99
Genevestigator:Q93V99 Uniprot:Q93V99
Length = 743
Score = 1771 (628.5 bits), Expect = 1.4e-293, Sum P(2) = 1.4e-293
Identities = 348/413 (84%), Positives = 369/413 (89%)
Query: 266 DQNQWSSVFCGIVSRAMTIEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCK 325
D NQWS VF GIVSRA+T+EVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCK
Sbjct: 327 DVNQWSCVFSGIVSRALTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCK 386
Query: 326 QHSDGTWAVVDVSLDNLRPS-PTSKCRRRPSGCLIQELPNGYSKVIWVEHVEVDDRSVHN 384
QHSDG+WAVVDVSLD+LRPS P + RRRPSGCLIQELPNGYSKV W+EH+EVDDRSVHN
Sbjct: 387 QHSDGSWAVVDVSLDSLRPSTPILRTRRRPSGCLIQELPNGYSKVTWIEHMEVDDRSVHN 446
Query: 385 IYKPLVNSGLAFGAKRWVATLDRQCERLASSMANNIPAGDLCVITSPEGRKSMLKLAERM 444
+YKPLV SGLAFGAKRWVATL+RQCERLASSMA+NIP GDL VITSPEGRKSMLKLAERM
Sbjct: 447 MYKPLVQSGLAFGAKRWVATLERQCERLASSMASNIP-GDLSVITSPEGRKSMLKLAERM 505
Query: 445 VTSFCTGVGASTAHAWTTLSATGSDDVRVMTRKSMDDPGRPPGIVLSAATSFWIPVPPRR 504
V SFC+GVGASTAHAWTT+S TGSDDVRVMTRKSMDDPGRPPGIVLSAATSFWIPV P+R
Sbjct: 506 VMSFCSGVGASTAHAWTTMSTTGSDDVRVMTRKSMDDPGRPPGIVLSAATSFWIPVAPKR 565
Query: 505 IFDFLRDENSRSEWDILSNGGLVQEMAHIANGRDPGNCVSLLRVNSANSSQSNMLVLQES 564
+FDFLRDENSR EWDILSNGG+VQEMAHIANG +PGNCVSLLRVNS NSSQSNML+LQES
Sbjct: 566 VFDFLRDENSRKEWDILSNGGMVQEMAHIANGHEPGNCVSLLRVNSGNSSQSNMLILQES 625
Query: 565 CTDSTGSYVIYAPVDIVAMNMVLSGGDPDYVALLPSGFAILPDGP--GFNX-------XX 615
CTD++GSYVIYAPVDIVAMN+VLSGGDPDYVALLPSGFAILPDG G +
Sbjct: 626 CTDASGSYVIYAPVDIVAMNVVLSGGDPDYVALLPSGFAILPDGSVGGGDGNQHQEMVST 685
Query: 616 XXXXXXXXXXXTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAAVMTD 668
TVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAAV D
Sbjct: 686 TSSGSCGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAAVSCD 738
Score = 1072 (382.4 bits), Expect = 1.4e-293, Sum P(2) = 1.4e-293
Identities = 215/280 (76%), Positives = 238/280 (85%)
Query: 1 MFQPNTFESHHMFDMTRRS-SESDLGKL--KEDDYETKSGTETMEMEAPSGDD-QDPSQH 56
M+ PN FESHHMFDMT +S S++DLG +EDD+ETKSGTE + E PSG++ QDPSQ
Sbjct: 1 MYHPNMFESHHMFDMTPKSTSDNDLGITGSREDDFETKSGTE-VTTENPSGEELQDPSQR 59
Query: 57 P-KRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKA 115
P K+KRYHRHTQRQIQE+E+FFKECPHPDDKQRKELSR+L LEPLQVKFWFQNKRTQMKA
Sbjct: 60 PNKKKRYHRHTQRQIQELESFFKECPHPDDKQRKELSRDLNLEPLQVKFWFQNKRTQMKA 119
Query: 116 QHERHENQILKAENQKLRAENNRYKEALGNATCPNCGGPAALGEMSFDEQHLRIENARLR 175
Q ERHENQILK++N KLRAENNRYKEAL NATCPNCGGPAA+GEMSFDEQHLRIENARLR
Sbjct: 120 QSERHENQILKSDNDKLRAENNRYKEALSNATCPNCGGPAAIGEMSFDEQHLRIENARLR 179
Query: 176 EEIDRISGIAAKYVGKPL-SSF-P---HLTPRSLDLGFTNLGTQSGFVGEMYGGCDLIRS 230
EEIDRIS IAAKYVGKPL SSF P H RSLDL N G Q+GFVGEMYG D++RS
Sbjct: 180 EEIDRISAIAAKYVGKPLGSSFAPLAIHAPSRSLDLEVGNFGNQTGFVGEMYGTGDILRS 239
Query: 231 ISGPSEADKPMIVELAVAAMEEFLRMAQAGDPLW--TDQN 268
+S PSE DKP+IVELAVAAMEE +RMAQ GDPLW TD +
Sbjct: 240 VSIPSETDKPIIVELAVAAMEELVRMAQTGDPLWLSTDNS 279
>TAIR|locus:2207235 [details] [associations]
symbol:HDG2 "AT1G05230" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0010090 "trichome morphogenesis" evidence=IMP]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0010090 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 eggNOG:NOG261733 ProtClustDB:CLSN2681990
EMBL:AC000098 EMBL:AY037177 EMBL:AY091690 IPI:IPI00530516
PIR:G86186 RefSeq:NP_001184911.1 RefSeq:NP_172015.1
RefSeq:NP_849596.1 UniGene:At.19179 UniGene:At.50922
ProteinModelPortal:Q94C37 SMR:Q94C37 STRING:Q94C37 PaxDb:Q94C37
PRIDE:Q94C37 EnsemblPlants:AT1G05230.1 EnsemblPlants:AT1G05230.2
EnsemblPlants:AT1G05230.4 GeneID:839256 KEGG:ath:AT1G05230
TAIR:At1g05230 InParanoid:Q94C37 OMA:VGVITNQ PhylomeDB:Q94C37
Genevestigator:Q94C37 Uniprot:Q94C37
Length = 721
Score = 1684 (597.9 bits), Expect = 7.8e-260, Sum P(2) = 7.8e-260
Identities = 321/405 (79%), Positives = 357/405 (88%)
Query: 266 DQNQWSSVFCGIVSRAMTIEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCK 325
D NQWS++F G+VSRAMT+ VLSTGVAGNYNGALQVM+AEFQVPSPLVPTRE YF RYCK
Sbjct: 320 DVNQWSTIFAGMVSRAMTLAVLSTGVAGNYNGALQVMSAEFQVPSPLVPTRETYFARYCK 379
Query: 326 QHSDGTWAVVDVSLDNLRPSPTSKCRRRPSGCLIQELPNGYSKVIWVEHVEVDDRSVHNI 385
Q DG+WAVVD+SLD+L+P+P ++CRRR SGCLIQELPNGYSKV WVEHVEVDDR VHN+
Sbjct: 380 QQGDGSWAVVDISLDSLQPNPPARCRRRASGCLIQELPNGYSKVTWVEHVEVDDRGVHNL 439
Query: 386 YKPLVNSGLAFGAKRWVATLDRQCERLASSMANNIPAGDLCVITSPEGRKSMLKLAERMV 445
YK +V++G AFGAKRWVA LDRQCERLAS MA NI +G++ VIT+ EGR+SMLKLAERMV
Sbjct: 440 YKHMVSTGHAFGAKRWVAILDRQCERLASVMATNISSGEVGVITNQEGRRSMLKLAERMV 499
Query: 446 TSFCTGVGASTAHAWTTLSATGSDDVRVMTRKSMDDPGRPPGIVLSAATSFWIPVPPRRI 505
SFC GV ASTAH WTTLS TG++DVRVMTRKS+DDPGRPPGIVLSAATSFWIPVPP+R+
Sbjct: 500 ISFCAGVSASTAHTWTTLSGTGAEDVRVMTRKSVDDPGRPPGIVLSAATSFWIPVPPKRV 559
Query: 506 FDFLRDENSRSEWDILSNGGLVQEMAHIANGRDPGNCVSLLRVNSANSSQSNMLVLQESC 565
FDFLRDENSR+EWDILSNGG+VQEMAHIANGRD GNCVSLLRVNSANSSQSNML+LQESC
Sbjct: 560 FDFLRDENSRNEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESC 619
Query: 566 TDSTGSYVIYAPVDIVAMNMVLSGGDPDYVALLPSGFAILPDGPGFNXXXXXXXXXXXXX 625
TD T S+VIYAPVDIVAMN+VL+GGDPDYVALLPSGFAILPDG N
Sbjct: 620 TDPTASFVIYAPVDIVAMNIVLNGGDPDYVALLPSGFAILPDG---NANSGAPGGDGGSL 676
Query: 626 XTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAAVMTDNA 670
TVAFQILVDSVPTAKLSLGSVATVN+LI CTVERIKA++ + A
Sbjct: 677 LTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASMSCETA 721
Score = 840 (300.8 bits), Expect = 7.8e-260, Sum P(2) = 7.8e-260
Identities = 171/285 (60%), Positives = 213/285 (74%)
Query: 5 NTFESHHMFDMTRRSSESDLGKLKEDDYE---TKSGTETMEMEAPSGDDQDPSQHP-KRK 60
N ++H ++ ++E G L++D+++ TKSG+E E SG+DQDP HP K+K
Sbjct: 13 NADSNNHNYNHEDNNNE---GFLRDDEFDSPNTKSGSENQE--GGSGNDQDPL-HPNKKK 66
Query: 61 RYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERH 120
RYHRHTQ QIQEMEAFFKECPHPDDKQRK+LSREL LEPLQVKFWFQNKRTQMK HERH
Sbjct: 67 RYHRHTQLQIQEMEAFFKECPHPDDKQRKQLSRELNLEPLQVKFWFQNKRTQMKNHHERH 126
Query: 121 ENQILKAENQKLRAENNRYKEALGNATCPNCGGPAALGEMSFDEQHLRIENARLREEIDR 180
EN L+AEN+KLR +N RY+EAL NA+CPNCGGP A+GEMSFDE LR+ENARLREEIDR
Sbjct: 127 ENSHLRAENEKLRNDNLRYREALANASCPNCGGPTAIGEMSFDEHQLRLENARLREEIDR 186
Query: 181 ISGIAAKYVGKPLSSFP-----HLTPRSLDLGFTNLGTQSGFVGEMYGGC--DLIRSISG 233
IS IAAKYVGKP+S++P L PR L+L N+G GE YG DL++SI+
Sbjct: 187 ISAIAAKYVGKPVSNYPLMSPPPLPPRPLELAMGNIG------GEAYGNNPNDLLKSITA 240
Query: 234 PSEADKPMIVELAVAAMEEFLRMAQAGDPLWT----DQNQWSSVF 274
P+E+DKP+I++L+VAAMEE +RM Q +PLW D+ +++ F
Sbjct: 241 PTESDKPVIIDLSVAAMEELMRMVQVDEPLWKSLVLDEEEYARTF 285
>TAIR|locus:2127008 [details] [associations]
symbol:ANL2 "ANTHOCYANINLESS 2" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] [GO:0048765 "root hair cell differentiation"
evidence=IMP] [GO:0006473 "protein acetylation" evidence=RCA]
[GO:0042335 "cuticle development" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0043481 GO:GO:0042335 Gene3D:1.10.10.60
SUPFAM:SSF46689 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
EMBL:AF058919 EMBL:AL161472 EMBL:U85254 EMBL:AF077335 EMBL:AK226968
IPI:IPI00538459 PIR:T01237 RefSeq:NP_567183.2 UniGene:At.24442
ProteinModelPortal:Q0WV12 SMR:Q0WV12 STRING:Q0WV12 PaxDb:Q0WV12
PRIDE:Q0WV12 EnsemblPlants:AT4G00730.1 GeneID:828022
KEGG:ath:AT4G00730 TAIR:At4g00730 eggNOG:euNOG18333
HOGENOM:HOG000243256 InParanoid:Q0WV12 OMA:MAGTING PhylomeDB:Q0WV12
ProtClustDB:CLSN2685237 Genevestigator:Q0WV12 GO:GO:0048765
Uniprot:Q0WV12
Length = 802
Score = 1187 (422.9 bits), Expect = 7.9e-181, Sum P(2) = 7.9e-181
Identities = 230/410 (56%), Positives = 306/410 (74%)
Query: 266 DQNQWSSVFCGIVSRAMTIEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCK 325
D N+W+ +F V+RA T +V+S G+AG NGALQ+M AE QV SPLVP R F+R+CK
Sbjct: 396 DSNRWTEMFPCNVARATTTDVISGGMAGTINGALQLMNAELQVLSPLVPVRNVNFLRFCK 455
Query: 326 QHSDGTWAVVDVSLDNLRPSPTSK--CRRRPSGCLIQELPNGYSKVIWVEHVEVDDRSVH 383
QH++G WAVVDVS+D +R + RR PSGC++Q++ NGYSKV WVEH E D+ +H
Sbjct: 456 QHAEGVWAVVDVSIDPVRENSGGAPVIRRLPSGCVVQDVSNGYSKVTWVEHAEYDENQIH 515
Query: 384 NIYKPLVNSGLAFGAKRWVATLDRQCERLASSMANNIPAGDLCVITSPEGRKSMLKLAER 443
+Y+PL+ SGL FG++RW+ATL RQCE LA +++++ + D IT P GRKSMLKLA+R
Sbjct: 516 QLYRPLLRSGLGFGSQRWLATLQRQCECLAILISSSVTSHDNTSIT-PGGRKSMLKLAQR 574
Query: 444 MVTSFCTGVGASTAHAWTTLSATGSD-DVRVMTRKSMDDPGRPPGIVLSAATSFWIPVPP 502
M +FC+G+ A + H W+ L+ D DVRVMTRKS+DDPG PPGIVLSAATS W+P P
Sbjct: 575 MTFNFCSGISAPSVHNWSKLTVGNVDPDVRVMTRKSVDDPGEPPGIVLSAATSVWLPAAP 634
Query: 503 RRIFDFLRDENSRSEWDILSNGGLVQEMAHIANGRDPGNCVSLLRVNSANSSQSNMLVLQ 562
+R++DFLR+E R EWDILSNGG +QEMAHI G+D G VSLLR N+ N++QS+ML+LQ
Sbjct: 635 QRLYDFLRNERMRCEWDILSNGGPMQEMAHITKGQDQG--VSLLRSNAMNANQSSMLILQ 692
Query: 563 ESCTDSTGSYVIYAPVDIVAMNMVLSGGDPDYVALLPSGFAILPDGP---GFNXXXXXXX 619
E+C D++G+ V+YAPVDI AM++V++GGD YVALLPSGFA+LPDG G +
Sbjct: 693 ETCIDASGALVVYAPVDIPAMHVVMNGGDSSYVALLPSGFAVLPDGGIDGGGSGDGDQRP 752
Query: 620 XXXXXXXTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAAVMTDN 669
TVAFQILV+++PTAKL++ SV TVN+LI CTV++I+AA+ ++
Sbjct: 753 VGGGSLLTVAFQILVNNLPTAKLTVESVETVNNLISCTVQKIRAALQCES 802
Score = 590 (212.7 bits), Expect = 7.9e-181, Sum P(2) = 7.9e-181
Identities = 120/245 (48%), Positives = 165/245 (67%)
Query: 28 KEDDYETKSGTETMEMEAPSGDDQDPSQHPKRK-RYHRHTQRQIQEMEAFFKECPHPDDK 86
+E+++E++SG++ +E SG+DQD + P RK RYHRHT +QIQE+E+ FKECPHPD+K
Sbjct: 105 REEEHESRSGSDNVE--GISGEDQDAADKPPRKKRYHRHTPQQIQELESMFKECPHPDEK 162
Query: 87 QRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKLRAENNRYKEALGNA 146
QR ELS+ L LE QVKFWFQN+RTQMK Q ERHEN +L+ EN KLRAEN +EA+ N
Sbjct: 163 QRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENALLRQENDKLRAENMSIREAMRNP 222
Query: 147 TCPNCGGPAALGEMSFDEQHLRIENARLREEIDRISGIAAKYVGKPLSSFPHLTPRSLDL 206
C NCGGPA LG++S +E HLRIENARL++E+DR+ + K++G + H SL+L
Sbjct: 223 ICTNCGGPAMLGDVSLEEHHLRIENARLKDELDRVCNLTGKFLGHHHN---HHYNSSLEL 279
Query: 207 --GFTNLGTQSGFVGEMYGGCDLIRSISGPSEA-----DKPMIVELAVAAMEEFLRMAQA 259
G N G F + GG + S K +++ELA+ AM+E +++AQ+
Sbjct: 280 AVGTNNNGGHFAFPPDFGGGGGCLPPQQQQSTVINGIDQKSVLLELALTAMDELVKLAQS 339
Query: 260 GDPLW 264
+PLW
Sbjct: 340 EEPLW 344
>TAIR|locus:2098866 [details] [associations]
symbol:HDG1 "AT3G61150" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL137898 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 HOGENOM:HOG000243256
ProtClustDB:CLSN2685237 KO:K09338 EMBL:AJ224338 EMBL:AY050866
EMBL:AY096757 IPI:IPI00541112 PIR:T47907 RefSeq:NP_191674.1
UniGene:At.21209 HSSP:Q8C172 ProteinModelPortal:Q9M2E8 SMR:Q9M2E8
IntAct:Q9M2E8 PaxDb:Q9M2E8 PRIDE:Q9M2E8 EnsemblPlants:AT3G61150.1
GeneID:825287 KEGG:ath:AT3G61150 TAIR:At3g61150 eggNOG:NOG267226
InParanoid:Q9M2E8 OMA:HTEYDEN PhylomeDB:Q9M2E8
Genevestigator:Q9M2E8 Uniprot:Q9M2E8
Length = 808
Score = 1141 (406.7 bits), Expect = 2.6e-171, Sum P(2) = 2.6e-171
Identities = 223/415 (53%), Positives = 294/415 (70%)
Query: 266 DQNQWSSVFCGIVSRAMTIEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCK 325
D +W+ +F +VSR T E++S+G+ G NGAL +M AE Q+ SPLVP R+ F+R+CK
Sbjct: 394 DSERWAEMFPSMVSRTSTTEIISSGMGGR-NGALHLMHAELQLLSPLVPVRQVSFLRFCK 452
Query: 326 QHSDGTWAVVDVSLDNLRPSPTSKCRRRPSGCLIQELPNGYSKVIWVEHVEVDDRSVHNI 385
QH++G WAVVDVS+D++R +S CRR PSGCL+Q++ NGYSKV W+EH E D+ +H +
Sbjct: 453 QHAEGVWAVVDVSIDSIREGSSSSCRRLPSGCLVQDMANGYSKVTWIEHTEYDENHIHRL 512
Query: 386 YKPLVNSGLAFGAKRWVATLDRQCERLASSMANNIPAGDLCVITSPEGRKSMLKLAERMV 445
Y+PL+ GLAFGA RW+A L RQCE L M++ + + GRKSMLKLA+RM
Sbjct: 513 YRPLLRCGLAFGAHRWMAALQRQCECLTILMSSTVSTSTNPSPINCNGRKSMLKLAKRMT 572
Query: 446 TSFCTGVGASTAHAWTTLSATGSD-DVRVMTRKSMDDPGRPPGIVLSAATSFWIPVPPRR 504
+FC GV AS+ W+ L+ D DVR+MTRKS+++PG PPGI+L+AATS W+PV PRR
Sbjct: 573 DNFCGGVCASSLQKWSKLNVGNVDEDVRIMTRKSVNNPGEPPGIILNAATSVWMPVSPRR 632
Query: 505 IFDFLRDENSRSEWDILSNGGLVQEMAHIANGRDPGNCVSLLRVNSANSSQSNMLVLQES 564
+FDFL +E RSEWDILSNGG ++EMAHIA G D N VSLLR ++ N++QS+ML+LQE+
Sbjct: 633 LFDFLGNERLRSEWDILSNGGPMKEMAHIAKGHDRSNSVSLLRASAINANQSSMLILQET 692
Query: 565 CTDSTGSYVIYAPVDIVAMNMVLSGGDPDYVALLPSGFAILPDGPGFNXXXXXXXXXXX- 623
D+ G+ V+YAPVDI AM V++GGD YVALLPSGFAILP+G
Sbjct: 693 SIDAAGAVVVYAPVDIPAMQAVMNGGDSAYVALLPSGFAILPNGQAGTQRCAAEERNSIG 752
Query: 624 ---------XXXTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAAVMTDN 669
TVAFQILV+S+PTAKL++ SV TVN+LI CTV++IKAA+ D+
Sbjct: 753 NGGCMEEGGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALHCDS 807
Score = 546 (197.3 bits), Expect = 2.6e-171, Sum P(2) = 2.6e-171
Identities = 107/207 (51%), Positives = 144/207 (69%)
Query: 14 DMTRRSS--ESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHP--KRKRYHRHTQRQ 69
+M+R ES++ + + +S +E+ EA SGDD D S P K+KRYHRHT +Q
Sbjct: 62 EMSRNGEIMESNVSRKSSRGEDVESRSESDNAEAVSGDDLDTSDRPLKKKKRYHRHTPKQ 121
Query: 70 IQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAEN 129
IQ++E+ FKEC HPD+KQR +LSR L L+P QVKFWFQN+RTQMK Q ERHEN +L+ EN
Sbjct: 122 IQDLESVFKECAHPDEKQRLDLSRRLNLDPRQVKFWFQNRRTQMKTQIERHENALLRQEN 181
Query: 130 QKLRAENNRYKEALGNATCPNCGGPAALGEMSFDEQHLRIENARLREEIDRISGIAAKYV 189
KLRAEN +EA+ N C NCGGPA +GE+S +EQHLRIEN+RL++E+DR+ + K++
Sbjct: 182 DKLRAENMSVREAMRNPMCGNCGGPAVIGEISMEEQHLRIENSRLKDELDRVCALTGKFL 241
Query: 190 GKPLSSFPHLTPRSLDLGFTNLGTQSG 216
G+ S H+ +L LG +G SG
Sbjct: 242 GRSNGSH-HIPDSALVLG---VGVGSG 264
Score = 97 (39.2 bits), Expect = 7.2e-124, Sum P(2) = 7.2e-124
Identities = 45/140 (32%), Positives = 65/140 (46%)
Query: 125 LKAENQKLRAENNRYKEALGNATCPNCGGPAALGEMSFDEQHLRIENARLREEIDRISGI 184
+ E Q LR EN+R K+ L + C G LG S H I ++ L + SG
Sbjct: 212 ISMEEQHLRIENSRLKDEL-DRVCALTG--KFLGR-SNGSHH--IPDSALVLGVGVGSGG 265
Query: 185 AAKYVGKPLSSFPHLTPRSLDLGFTNLGTQSGFVGEMYGGCDLIRSISGPSEADKPMIVE 244
G LSS P L S +N GT SG V + + + +S + ++
Sbjct: 266 CNVGGGFTLSS-PLLPQASPRFEISN-GTGSGLVATV----NRQQPVSVSDFDQRSRYLD 319
Query: 245 LAVAAMEEFLRMAQAGDPLW 264
LA+AAM+E ++MAQ +PLW
Sbjct: 320 LALAAMDELVKMAQTREPLW 339
Score = 38 (18.4 bits), Expect = 1.2e-117, Sum P(2) = 1.2e-117
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 18 RSSESDLGKLKEDDYET 34
RSS+S L +++Y+T
Sbjct: 341 RSSDSGFEVLNQEEYDT 357
>TAIR|locus:2062540 [details] [associations]
symbol:HDG3 "AT2G32370" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048825 "cotyledon development" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 KO:K09338 eggNOG:NOG261733 GO:GO:0048825
EMBL:AC005700 EMBL:EF988635 IPI:IPI00527257 PIR:C84732
RefSeq:NP_180796.2 UniGene:At.38083 ProteinModelPortal:Q9ZV65
SMR:Q9ZV65 PaxDb:Q9ZV65 PRIDE:Q9ZV65 EnsemblPlants:AT2G32370.1
GeneID:817798 KEGG:ath:AT2G32370 TAIR:At2g32370 InParanoid:A7LBA8
PhylomeDB:Q9ZV65 Genevestigator:Q9ZV65 Uniprot:Q9ZV65
Length = 725
Score = 1074 (383.1 bits), Expect = 1.3e-165, Sum P(2) = 1.3e-165
Identities = 207/400 (51%), Positives = 283/400 (70%)
Query: 267 QNQWSSVFCGIVSRAMTIEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQ 326
+N WS++F GIV RA T E + AGN+NG LQ+M+AE+QV SPLV TRE+YFVRYCKQ
Sbjct: 328 ENLWSTMFAGIVGRARTHEQIMADAAGNFNGNLQIMSAEYQVLSPLVTTRESYFVRYCKQ 387
Query: 327 HSDGTWAVVDVSLDNLRPSPTSKCRRRPSGCLIQELPNGYSKVIWVEHVEVDDRSVHNIY 386
+G WAVVD+S+D+L P+ KCRRRPSGCLIQE+ +GYSKV WVEHVEVDD ++I+
Sbjct: 388 QGEGLWAVVDISIDHLLPNINLKCRRRPSGCLIQEMHSGYSKVTWVEHVEVDDAGSYSIF 447
Query: 387 KPLVNSGLAFGAKRWVATLDRQCERLASSMANN---IPAGDLCVITSPEGRKSMLKLAER 443
+ L+ +G AF A RWV TL RQCER++S ++ + + +GD +T+ G+ SMLK+AER
Sbjct: 448 EKLICTGQAFAANRWVGTLVRQCERISSILSTDFQSVDSGDHITLTN-HGKMSMLKIAER 506
Query: 444 MVTSFCTGVGASTAHAWTTLSATGSDDVRVMTRKSMDDPGRPPGIVLSAATSFWIPVPPR 503
+ +F G+ +T T S +D+RVMT KS++DPG+PPG+++ AATSFW+P PP
Sbjct: 507 IARTFFAGMTNATGS--TIFSGVEGEDIRVMTMKSVNDPGKPPGVIICAATSFWLPAPPN 564
Query: 504 RIFDFLRDENSRSEWDILSNGGLVQEMAHIANGRDPGNCVSLLRVNSANSSQSNMLVLQE 563
+FDFLR+ R WD+L NG ++ ++A I NG D NC SLLR ++S+S M+++QE
Sbjct: 565 TVFDFLREATHRHNWDVLCNGEMMHKIAEITNGIDKRNCASLLR--HGHTSKSKMMIVQE 622
Query: 564 SCTDSTGSYVIYAPVDIVAMNMVL-SGGDPDYVALLPSGFAILPDGPGFNXXXXXXXXXX 622
+ TD T S+V+YAPVD+ +M++ L GGDPD+V +LPSGFAI PDG G
Sbjct: 623 TSTDPTASFVLYAPVDMTSMDITLHGGGDPDFVVILPSGFAIFPDGTG-----KPGGKEG 677
Query: 623 XXXXTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIK 662
T++FQ+LV+S P A+LS+ SVAT +LI+ TV RIK
Sbjct: 678 GSLLTISFQMLVESGPEARLSVSSVATTENLIRTTVRRIK 717
Score = 559 (201.8 bits), Expect = 1.3e-165, Sum P(2) = 1.3e-165
Identities = 124/248 (50%), Positives = 161/248 (64%)
Query: 22 SDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECP 81
+D G D T SG + G++Q P +H K+K+Y+RHTQ QI EMEAFF+ECP
Sbjct: 38 NDSGDQDFDSGNTSSGNHGEGL----GNNQAP-RH-KKKKYNRHTQLQISEMEAFFRECP 91
Query: 82 HPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKLRAENNRYKE 141
HPDDKQR +LS +LGL+P+Q+KFWFQNKRTQ K Q ER EN L+ N LR+EN R +E
Sbjct: 92 HPDDKQRYDLSAQLGLDPVQIKFWFQNKRTQNKNQQERFENSELRNLNNHLRSENQRLRE 151
Query: 142 ALGNATCPNCGGPAALGEMSFDEQHLRIENARLREEIDRISGIAAKY---VGKPLSSFPH 198
A+ A CP CGG A+GEM+F+E HLRI NARL EEI ++S A K G P+ S P
Sbjct: 152 AIHQALCPKCGGQTAIGEMTFEEHHLRILNARLTEEIKQLSVTAEKISRLTGIPVRSHPR 211
Query: 199 LTPRSLDLGFT-NLGTQSGFVGEMYGGCDLIRSISGPSEAD-KPMIVELAVAAMEEFLRM 256
++P + F +G++ G VG R +GP++A+ KP+I+ELA AMEE L M
Sbjct: 212 VSPPNPPPNFEFGMGSK-GNVGNHS------RETTGPADANTKPIIMELAFGAMEELLVM 264
Query: 257 AQAGDPLW 264
AQ +PLW
Sbjct: 265 AQVAEPLW 272
Score = 38 (18.4 bits), Expect = 1.5e-110, Sum P(2) = 1.5e-110
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 6 TFESHHMFDMTRRSSE 21
TFE HH+ + R +E
Sbjct: 171 TFEEHHLRILNARLTE 186
>TAIR|locus:2206880 [details] [associations]
symbol:HDG11 "AT1G73360" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0010091 "trichome branching"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 GO:GO:0010091 HSSP:P02836 KO:K09338
EMBL:AC012396 EMBL:BT003979 EMBL:BT004915 IPI:IPI00520147
PIR:B96760 RefSeq:NP_177479.1 UniGene:At.34997
ProteinModelPortal:Q9FX31 SMR:Q9FX31 IntAct:Q9FX31 PaxDb:Q9FX31
PRIDE:Q9FX31 EnsemblPlants:AT1G73360.1 GeneID:843671
KEGG:ath:AT1G73360 TAIR:At1g73360 eggNOG:NOG70408 InParanoid:Q9FX31
OMA:MKLAQRM PhylomeDB:Q9FX31 ProtClustDB:CLSN2679864
Genevestigator:Q9FX31 Uniprot:Q9FX31
Length = 722
Score = 973 (347.6 bits), Expect = 6.5e-151, Sum P(2) = 6.5e-151
Identities = 194/417 (46%), Positives = 276/417 (66%)
Query: 263 LWTDQNQWSSVFCGIVSRAMTIEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVR 322
++ D +W+ +F I++ + T+ V+S+G+ G + GAL ++ E +V SPLV TRE +R
Sbjct: 308 MFMDCVKWTELFPSIIAASKTLAVISSGMGGTHEGALHLLYEEMEVLSPLVATREFCELR 367
Query: 323 YCKQHSDGTWAVVDVSLDNLRPSPTSKCRRRPSGCLIQELPNGYSKVIWVEHVEVDDRS- 381
YC+Q G+W VV+VS D + S+ R PSGCLIQ++PNGYSKV WVEH+E +++
Sbjct: 368 YCQQTEQGSWIVVNVSYDLPQFVSHSQSYRFPSGCLIQDMPNGYSKVTWVEHIETEEKEL 427
Query: 382 VHNIYKPLVNSGLAFGAKRWVATLDRQCERLASSMANNIPAGDLC-VITSPEGRKSMLKL 440
VH +Y+ +++ G+AFGA RWV TL R CER AS + DL VI SPEG++SM++L
Sbjct: 428 VHELYREIIHRGIAFGADRWVTTLQRMCERFASLSVPASSSRDLGGVILSPEGKRSMMRL 487
Query: 441 AERMVTSFCTGVGASTAHAWTTLSATGSDDVRVMTRKSMDDPGRPPGIVLSAATSFWIPV 500
A+RM++++C V S T +S +RV KS + P G VL AAT+FW+P
Sbjct: 488 AQRMISNYCLSVSRSNNTRSTVVSELNEVGIRVTAHKSPE----PNGTVLCAATTFWLPN 543
Query: 501 PPRRIFDFLRDENSRSEWDILSNGGLVQEMAHIANGRDPGNCVSLLRVNSANSSQSNMLV 560
P+ +F+FL+DE +R +WD+LSNG VQE+AHI+NG PGNC+S+LR ++A S +NML+
Sbjct: 544 SPQNVFNFLKDERTRPQWDVLSNGNAVQEVAHISNGSHPGNCISVLRGSNATHS-NNMLI 602
Query: 561 LQESCTDSTGSYVIYAPVDIVAMNMVLSGGDPDYVALLPSGFAILPDGPGFNX------X 614
LQES TDS+G++V+Y+PVD+ A+N+ +SG DP Y+ LL SGF I PDG G N
Sbjct: 603 LQESSTDSSGAFVVYSPVDLAALNIAMSGEDPSYIPLLSSGFTISPDGNGSNSEQGGAST 662
Query: 615 XXXXXXXXXXXXTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAAVMTDNAS 671
TV FQI+V ++PTAKL++ SV TVN+LI TV +IK A+ AS
Sbjct: 663 SSGRASASGSLITVGFQIMVSNLPTAKLNMESVETVNNLIGTTVHQIKTALSGPTAS 719
Score = 521 (188.5 bits), Expect = 6.5e-151, Sum P(2) = 6.5e-151
Identities = 98/157 (62%), Positives = 120/157 (76%)
Query: 58 KRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQH 117
K+KRYHRHT +QIQ +E+ FKECPHPD+KQR +LSRELGL P Q+KFWFQN+RTQ+KAQH
Sbjct: 32 KKKRYHRHTAQQIQRLESSFKECPHPDEKQRNQLSRELGLAPRQIKFWFQNRRTQLKAQH 91
Query: 118 ERHENQILKAENQKLRAENNRYKEALGNATCPNCGGPAALGEMSFDEQHLRIENARLREE 177
ER +N LKAEN K+R EN +EAL +A CPNCGGP + FDEQ LRIENA LREE
Sbjct: 92 ERADNSALKAENDKIRCENIAIREALKHAICPNCGGPPVSEDPYFDEQKLRIENAHLREE 151
Query: 178 IDRISGIAAKYVGKPLSSFPHLTPRS---LDLGFTNL 211
++R+S IA+KY+G+P+S L P LDL T+L
Sbjct: 152 LERMSTIASKYMGRPISQLSTLHPMHISPLDLSMTSL 188
Score = 96 (38.9 bits), Expect = 5.1e-106, Sum P(2) = 5.1e-106
Identities = 51/179 (28%), Positives = 77/179 (43%)
Query: 107 QNKRTQMKAQHERHENQILKAENQKLRAENNRYKEAL-GNATCPNCGGPAALGE--MSFD 163
Q++R A + EN ++ EN +R K A+ N P E + +
Sbjct: 90 QHERADNSAL--KAENDKIRCENIAIR---EALKHAICPNCGGPPVSEDPYFDEQKLRIE 144
Query: 164 EQHLRIENARLREEIDRISGIAAKYVGKPLSSFP-HLTPRSLDLGFTNLGTQSGFVGEMY 222
HLR E R+ + G + + + + P H++P LDL T+L T G G
Sbjct: 145 NAHLREELERMSTIASKYMG---RPISQLSTLHPMHISP--LDLSMTSL-TGCGPFGHGP 198
Query: 223 G-GCDLIRSIS---GP------------SEADKPMIVELAVAAMEEFLRMAQAGDPLWT 265
DL+ S GP S+ DKP++ +A+ AMEE LR+ Q +PLWT
Sbjct: 199 SLDFDLLPGSSMAVGPNNNLQSQPNLAISDMDKPIMTGIALTAMEELLRLLQTNEPLWT 257
>TAIR|locus:2030913 [details] [associations]
symbol:HDG12 "homeodomain GLABROUS 12" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0010091 "trichome
branching" evidence=IGI] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=RCA] [GO:0031507
"heterochromatin assembly" evidence=RCA] [GO:0045787 "positive
regulation of cell cycle" evidence=RCA] [GO:0048451 "petal
formation" evidence=RCA] [GO:0048453 "sepal formation"
evidence=RCA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:AC034106 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 GO:GO:0010091 HSSP:P02836
KO:K09338 eggNOG:NOG70408 ProtClustDB:CLSN2679864 EMBL:AF424554
EMBL:BT001050 IPI:IPI00531481 PIR:D86314 RefSeq:NP_564041.2
UniGene:At.15827 ProteinModelPortal:Q9LMT8 SMR:Q9LMT8 PaxDb:Q9LMT8
PRIDE:Q9LMT8 EnsemblPlants:AT1G17920.1 GeneID:838371
KEGG:ath:AT1G17920 TAIR:At1g17920 InParanoid:Q9LMT8 OMA:CENIAMQ
PhylomeDB:Q9LMT8 Genevestigator:Q9LMT8 Uniprot:Q9LMT8
Length = 687
Score = 938 (335.3 bits), Expect = 2.9e-148, Sum P(2) = 2.9e-148
Identities = 190/398 (47%), Positives = 267/398 (67%)
Query: 271 SSVFCGIVSRAMTIEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQHSDG 330
+ +F IV+ + T+ V+S+G+ GN+ AL +M E QV SPLV TRE +RYC+Q G
Sbjct: 296 TELFPSIVASSKTLAVISSGLRGNHGDALHLMIEELQVLSPLVTTREFCVLRYCQQIEHG 355
Query: 331 TWAVVDVSLDNLRPSPTSKCRRRPSGCLIQELPNGYSKVIWVEHVEVDDRS-VHNIYKPL 389
TWA+V+VS + + S+ R PSGCLIQ++ NGYSKV WVEH E +++ +H ++K +
Sbjct: 356 TWAIVNVSYEFPQFISQSRSYRFPSGCLIQDMSNGYSKVTWVEHGEFEEQEPIHEMFKDI 415
Query: 390 VNSGLAFGAKRWVATLDRQCERLASSMANNIPAGDLC-VITSPEGRKSMLKLAERMVTSF 448
V+ GLAFGA+RW+ATL R CER + + + DL VI SPEG++S+++LA RMV++F
Sbjct: 416 VHKGLAFGAERWIATLQRMCERFTNLLEPATSSLDLGGVIPSPEGKRSIMRLAHRMVSNF 475
Query: 449 CTGVGASTAHAWTTLSATGSDDVRVMTRKSMDDPGRPPGIVLSAATSFWIPVPPRRIFDF 508
C VG S T +S +RV + KS +P G+VL AATSFW+P+ P+ +F+F
Sbjct: 476 CLSVGTSNNTRSTVVSGLDEFGIRVTSHKSRHEPN---GMVLCAATSFWLPISPQNVFNF 532
Query: 509 LRDENSRSEWDILSNGGLVQEMAHIANGRDPGNCVSLLRVNSANSSQSNMLVLQESCTDS 568
L+DE +R +WD+LSNG VQE+AHI NG +PGNC+S+LR +A+SSQ+NML+LQESC DS
Sbjct: 533 LKDERTRPQWDVLSNGNSVQEVAHITNGSNPGNCISVLRGFNASSSQNNMLILQESCIDS 592
Query: 569 TGS-YVIYAPVDIVAMNMVLSGGDPDYVALLPSGFAILPDGPGFNXXXXXXXXXXXXXXT 627
+ + VIY PVD+ A+N+ +SG D Y+ +LPSGFAI PDG T
Sbjct: 593 SSAALVIYTPVDLPALNIAMSGQDTSYIPILPSGFAISPDG---------SSKGGGSLIT 643
Query: 628 VAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAAV 665
V FQI+V + AKL++ S+ TVN+LI TV +IK +
Sbjct: 644 VGFQIMVSGLQPAKLNMESMETVNNLINTTVHQIKTTL 681
Score = 531 (192.0 bits), Expect = 2.9e-148, Sum P(2) = 2.9e-148
Identities = 113/232 (48%), Positives = 148/232 (63%)
Query: 48 GDDQ--DPSQ----HPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 101
GD Q D S+ + K+KR+HRHT QIQ +E+ F EC HPD+KQR +LSRELGL P Q
Sbjct: 5 GDSQNHDSSETEKKNKKKKRFHRHTPHQIQRLESTFNECQHPDEKQRNQLSRELGLAPRQ 64
Query: 102 VKFWFQNKRTQMKAQHERHENQILKAENQKLRAENNRYKEALGNATCPNCGGPAALGEMS 161
+KFWFQN+RTQ KAQHER +N LK EN K+R EN +EA+ +A CP+CG +
Sbjct: 65 IKFWFQNRRTQKKAQHERADNCALKEENDKIRCENIAIREAIKHAICPSCGDSPVNEDSY 124
Query: 162 FDEQHLRIENARLREEIDRISGIAAKYVGKPLSSFPHL-TPRSLD-LGFTNLGTQSGFVG 219
FDEQ LRIENA+LR+E++R+S IAAK++G+P+S P L P + L + G F
Sbjct: 125 FDEQKLRIENAQLRDELERVSSIAAKFLGRPISHLPPLLNPMHVSPLELFHTGPSLDF-D 183
Query: 220 EMYGGCDLIRSISGPS-------EADKPMIVELAVAAMEEFLRMAQAGDPLW 264
+ G C + S PS E DK ++ +AV AMEE LR+ Q +PLW
Sbjct: 184 LLPGSCSSMSVPSLPSQPNLVLSEMDKSLMTNIAVTAMEELLRLLQTNEPLW 235
>TAIR|locus:2145116 [details] [associations]
symbol:HDG7 "AT5G52170" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 eggNOG:euNOG18333
HOGENOM:HOG000243256 HSSP:Q6B2C0 EMBL:AB025603 IPI:IPI00525258
RefSeq:NP_200030.1 UniGene:At.55500 ProteinModelPortal:Q9LTK3
SMR:Q9LTK3 EnsemblPlants:AT5G52170.1 GeneID:835293
KEGG:ath:AT5G52170 TAIR:At5g52170 InParanoid:Q9LTK3
PhylomeDB:Q9LTK3 Genevestigator:Q9LTK3 Uniprot:Q9LTK3
Length = 682
Score = 1406 (500.0 bits), Expect = 7.5e-144, P = 7.5e-144
Identities = 306/682 (44%), Positives = 433/682 (63%)
Query: 14 DMTRRSSESD--LGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKR----YHRHTQ 67
DM+R LGKLK+D++E++S ++ +A SGD+ Q PK+K+ YHRHT
Sbjct: 8 DMSRGDFNPSFFLGKLKDDEFESRSLSDD-SFDAMSGDEDKQEQRPKKKKRKTKYHRHTS 66
Query: 68 RQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKA 127
QIQE+E+FFKECPHP++KQR EL ++L LE Q+KFWFQN+RTQMK Q ERHEN ILK
Sbjct: 67 YQIQELESFFKECPHPNEKQRLELGKKLTLESKQIKFWFQNRRTQMKTQLERHENVILKQ 126
Query: 128 ENQKLRAENNRYKEALGNATCPNCGGPAALGEMSFDEQHLRIENARLREEIDRISGIAAK 187
EN+KLR EN+ KE++ + C +CGG GE+SF++ LRIENA+L+EE+DRI +A +
Sbjct: 127 ENEKLRLENSFLKESMRGSLCIDCGGAVIPGEVSFEQHQLRIENAKLKEELDRICALANR 186
Query: 188 YVGKPLS----SFPHLTPRSLDLGF-TNLGTQSGFVGEMYGGCDLIRSISG------PSE 236
++G +S S + + L +G + GT F+ D + ++ S+
Sbjct: 187 FIGGSISLEQPSNGGIGSQHLPIGHCVSGGTSLMFMDLAMEAMDELLKLAELETSLWSSK 246
Query: 237 ADKPMIVELAVAAMEEFLRMAQAGDPLWT--DQNQWSSVFCGIVSRAMTIEVLSTGVAGN 294
++K + + E L + + + T D N+W+ +F IV+ A T+EV+S G G+
Sbjct: 247 SEKGSMNHFP-GSRETGLVLINSLALVETLMDTNKWAEMFECIVAVASTLEVISNGSDGS 305
Query: 295 YNGALQVMTAEFQVPSPLVPTRENYFVRYCKQHSDGTWAVVDVSLDNLRPSPTSKC---- 350
NG++ +M AEFQV SPLVP ++ F+RYCKQH DG WAVVDVS D R + K
Sbjct: 306 RNGSILLMQAEFQVMSPLVPIKQKKFLRYCKQHGDGLWAVVDVSYDINRGNENLKSYGGS 365
Query: 351 RRRPSGCLIQELPNGYSKVIWVEHVEVDDRSVHNIYKPLVNSGLAFGAKRWVATLDRQCE 410
+ PSGC+IQ++ NG SKV W+EH E ++ H++Y+PL++S + GA +W+ATL RQCE
Sbjct: 366 KMFPSGCIIQDIGNGCSKVTWIEHSEYEESHTHSLYQPLLSSSVGLGATKWLATLQRQCE 425
Query: 411 RLASSMANNIPAGDLCVITSPEGRKSMLKLAERMVTSFCTGVGASTAHAWTTLSATG-SD 469
+++ G S G KS+LKLA+RM +F +G+ AS H W L A
Sbjct: 426 SFTMLLSSEDHTG-----LSHAGTKSILKLAQRMKLNFYSGITASCIHKWEKLLAENVGQ 480
Query: 470 DVRVMTRKSMDDPGRPPGIVLSAATSFWIPVPPRRIFDFLRDENSRSEWDILSNGGLVQE 529
D R++TRKS++ P GIVLSAATS W+PV +R+F+FL D R++WDILSNG ++
Sbjct: 481 DTRILTRKSLE----PSGIVLSAATSLWLPVTQQRLFEFLCDGKCRNQWDILSNGASMEN 536
Query: 530 MAHIANGRDPGNCVSLLRVNSANSSQSNMLVLQESCTDSTGSYVIYAPVDIVAMNMVLSG 589
+ G+ G+CVSLLR + ++S+ML+LQE+ D +G+ V+YAPVDI +MN V+SG
Sbjct: 537 TLLVPKGQQEGSCVSLLRAAGNDQNESSMLILQETWNDVSGALVVYAPVDIPSMNTVMSG 596
Query: 590 GDPDYVALLPSGFAILPDGPG-----FNXXXXXXXXXXXX-XXTVAFQILVDSVPTAKLS 643
GD YVALLPSGF+ILPDG F+ TV FQILV+S+PTAKL+
Sbjct: 597 GDSAYVALLPSGFSILPDGSSSSSDQFDTDGGLVNQESKGCLLTVGFQILVNSLPTAKLN 656
Query: 644 LGSVATVNSLIKCTVERIKAAV 665
+ SV TVN+LI CT+ +I+AA+
Sbjct: 657 VESVETVNNLIACTIHKIRAAL 678
>TAIR|locus:2129396 [details] [associations]
symbol:HDG4 "AT4G17710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006944 "cellular membrane fusion" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AL161547 Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338
HSSP:Q6B2C0 EMBL:Z97344 eggNOG:NOG264325 EMBL:AY133700
IPI:IPI00546205 PIR:B71447 RefSeq:NP_193506.2 UniGene:At.32974
ProteinModelPortal:Q8L7H4 SMR:Q8L7H4 IntAct:Q8L7H4 PaxDb:Q8L7H4
PRIDE:Q8L7H4 EnsemblPlants:AT4G17710.1 GeneID:827492
KEGG:ath:AT4G17710 TAIR:At4g17710 InParanoid:Q8L7H4
PhylomeDB:Q8L7H4 Genevestigator:Q8L7H4 Uniprot:Q8L7H4
Length = 709
Score = 812 (290.9 bits), Expect = 1.3e-119, Sum P(3) = 1.3e-119
Identities = 177/409 (43%), Positives = 261/409 (63%)
Query: 266 DQNQWSSVFCGIVSRAMTIEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCK 325
D ++WS +F IVS A T +++S+G +G +G L +M AE QV SPLVPTRE YF+RY +
Sbjct: 314 DADKWSEMFFPIVSSAKTAQIISSGASGP-SGTLLLMFAELQVVSPLVPTREAYFLRYVE 372
Query: 326 QHSD-GTWAVVDVSLDNLRPSP---TSKCRRRPSGCLIQELPNGYSKVIWVEHVEVDDRS 381
Q+++ G W VVD +D ++P+ T + RR+PSGC+IQ + NGYS+V WVEHVEV+++
Sbjct: 373 QNAEEGKWMVVDFPIDRIKPASATTTDQYRRKPSGCIIQAMRNGYSQVTWVEHVEVEEKH 432
Query: 382 VHN-IYKPLVNSGLAFGAKRWVATLDRQCERLASSMANNIPAGDLCVITSPEGRKSMLKL 440
V + + + V SG+AFGA+RW++ L RQCER+AS MA NI DL VI S E RK+++KL
Sbjct: 433 VQDEVVREFVESGVAFGAERWLSVLKRQCERMASLMATNIT--DLGVIPSVEARKNLMKL 490
Query: 441 AERMVTSFCTGVGASTAHAWTTLSATGSDDVRVMTRKSMDDPGRPPGIVLSAATSFWIPV 500
++RMV +FC + S A T D V++++RK G+V A + +P
Sbjct: 491 SQRMVKTFCLNIINSHGQAPT------KDTVKIVSRKVCG------GLVPCAVSVTLLPY 538
Query: 501 PPRRIFDFLRDENSRSEWDILSNGGLVQEMAHIANGRDPGNCVSLLRVN-SANSSQSNML 559
+++FD LRD S+ +IL G QE+AHIANG GN +SLLR+N +NSS + L
Sbjct: 539 SHQQVFDLLRDNQRLSQLEILFMGSSFQEVAHIANGSHLGNSISLLRINVESNSSHNVEL 598
Query: 560 VLQESCTDSTGSYVIYAPVDIVAMNMVLSGGDPDYVALLPSGFAILPDGPGFNXXXXXXX 619
+LQE+CTD++GS ++Y+ VD VA+ + ++G DP + LLP GF+++P P +
Sbjct: 599 MLQETCTDNSGSLLVYSTVDPVAVQLAMNGEDPSEIPLLPVGFSVVPVNPS-DGVEGSSV 657
Query: 620 XXXXXXXTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAAVMTD 668
TVA Q+L +V T +L L +V+ +N I TV RI +A++ D
Sbjct: 658 SSPSCLLTVAIQVLGSNVTTERLDLSTVSVINHRICATVNRITSALVND 706
Score = 338 (124.0 bits), Expect = 1.3e-119, Sum P(3) = 1.3e-119
Identities = 80/184 (43%), Positives = 107/184 (58%)
Query: 29 EDDYETKSGTETMEMEAPSGDDQDP------SQHP---KRKRYHRHTQRQIQEMEAFFKE 79
+++YE S E+ ++ +G DP Q P K+KRYHRHT QIQ+MEA FKE
Sbjct: 51 KEEYEVMSKIESGSGKS-TGSGHDPVENTAIEQEPPAAKKKRYHRHTASQIQQMEALFKE 109
Query: 80 CPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKLRAENNRY 139
HPD K R LS++LGL P+QVKFWFQNKRTQ+KAQ R +N LKAEN+ L+ E+
Sbjct: 110 NAHPDTKTRLRLSKKLGLSPIQVKFWFQNKRTQIKAQQSRSDNAKLKAENETLKTESQNI 169
Query: 140 KEALGNATCPNCGGPAALGEMSFDEQHLRIENARLREEIDRISGIAAKYVGKPLSSFPHL 199
+ C CG +LR+ENARLR+E+DR+ I + + P S +
Sbjct: 170 QSNFQCLFCSTCG------------HNLRLENARLRQELDRLRSIVS--MRNPSPS-QEI 214
Query: 200 TPRS 203
TP +
Sbjct: 215 TPET 218
Score = 62 (26.9 bits), Expect = 1.3e-119, Sum P(3) = 1.3e-119
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 235 SEADKPMIVELAVAAMEEFLRMAQAGDPLWTDQNQWSSVFC 275
+E +K + +ELAV+ E +M +PLW + + C
Sbjct: 229 AEEEKAIDMELAVSCARELAKMCDINEPLWNKKRLDNESVC 269
>TAIR|locus:2097770 [details] [associations]
symbol:HDG8 "AT3G03260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338 EMBL:AC012328
EMBL:AK117867 IPI:IPI00538783 RefSeq:NP_186976.2 UniGene:At.41007
ProteinModelPortal:Q9M9P4 SMR:Q9M9P4 PRIDE:Q9M9P4
EnsemblPlants:AT3G03260.1 GeneID:821305 KEGG:ath:AT3G03260
TAIR:At3g03260 InParanoid:Q9M9P4 OMA:LNMESVA PhylomeDB:Q9M9P4
Genevestigator:Q9M9P4 Uniprot:Q9M9P4
Length = 699
Score = 738 (264.8 bits), Expect = 8.9e-113, Sum P(2) = 8.9e-113
Identities = 168/418 (40%), Positives = 244/418 (58%)
Query: 263 LWTDQNQWSSVFCGIVSRAMTIEVLSTG--VAGNYNGALQVMTAEFQVPSPLVPTRENYF 320
++ D +W +F IV++A TI VL +G + GN N LQVM + + SPLVP RE
Sbjct: 285 MFLDPEKWKELFPTIVNKANTIHVLGSGLPIRGNCN-VLQVMWEQLHILSPLVPAREFMV 343
Query: 321 VRYCKQHSDGTWAVVDVSLDNLRPSPTSKCRRRPSGCLIQELPNGYSKVIWVEHVEVDDR 380
VR C++ G W + DVS + C +RPSGCLIQ LP+ +SKV+W+EHVEVD +
Sbjct: 344 VRCCQEIEKGIWIIADVSHRANFDFGNAACYKRPSGCLIQALPDAHSKVMWIEHVEVDHK 403
Query: 381 -SVHNIYKPLVNSGLAFGAKRWVATLDRQCERLASSMANNIPAGDLC-VITSPEGRKSML 438
H IY+ L++ G +GAKRW+ TL+R CER+A S +P D VIT+ E R+S++
Sbjct: 404 LDTHKIYRDLLSGGSGYGAKRWIVTLERMCERMALSSIQTLPPSDRSEVITTGEARRSVM 463
Query: 439 KLAERMVTSFCTGVGASTAHAWTTLSATGSDDVRVMTRKSMDDPGRPPGIVLSAATSFWI 498
KL ERMV +F + S + S G VRV R +++ G+PPGIV+SA++S I
Sbjct: 464 KLGERMVKNFNEMLTMSGKIDFPQQSKNG---VRVSIRMNIE-AGQPPGIVVSASSSLAI 519
Query: 499 PVPPRRIFDFLRDENSRSEWDILSNGGLVQEMAHIANGRDPGNCVSLLRVNSANSSQSNM 558
P+ P ++F FL++ ++R +WDILS G +V E+A I G NCV++LRV+ + ++
Sbjct: 520 PLTPLQVFAFLQNLDTRQQWDILSYGTVVNEIARIVTGSSETNCVTILRVHPTHEENNDK 579
Query: 559 LVLQESCTD-----------STGSYVIYAPVDIVAMNMVLSGG-DPDYVALLPSGFAILP 606
+V+Q+SC D + G ++YAP+D+ M+ +SG DP ++ +LPSGF I
Sbjct: 580 MVVQDSCKDDMLMLQDCYMDALGGMIVYAPMDMATMHFAVSGEVDPSHIPILPSGFVISS 639
Query: 607 DGPGFNXXXXXXXXXXXXXXTVAFQILVDSVPTAKLSLG--SVATVNSLIKCTVERIK 662
DG TVAFQILV + SV TV++LI T++RIK
Sbjct: 640 DG------RRSTVEDGGTLLTVAFQILVSGKANRSREVNEKSVDTVSALISSTIQRIK 691
Score = 395 (144.1 bits), Expect = 8.9e-113, Sum P(2) = 8.9e-113
Identities = 94/230 (40%), Positives = 131/230 (56%)
Query: 47 SGDDQ----DPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQV 102
SG++Q D Q+ KR HRHT +QIQ +EA+FKECPHPD++QR +L REL LEP Q+
Sbjct: 9 SGNEQYTSGDAKQNGKRT-CHRHTPQQIQRLEAYFKECPHPDERQRNQLCRELKLEPDQI 67
Query: 103 KFWFQNKRTQMKAQHERHENQILKAENQKLRAENNRYKEALGNATCPNCGGPA-ALGEMS 161
KFWFQNKRTQ K Q +R N +L+ EN+ L+++N +AL + CP CGGP E
Sbjct: 68 KFWFQNKRTQSKTQEDRSTNVLLRGENETLQSDNEAMLDALKSVLCPACGGPPFGREERG 127
Query: 162 FDEQHLRIENARLREEIDRISGIAAKY------VGKPLSSFPHLTPRSLDLGFTNLGTQS 215
+ Q LR ENARL++ DRIS ++ V L+ P L S + N+ S
Sbjct: 128 HNLQKLRFENARLKDHRDRISNFVDQHKPNEPTVEDSLAYVPSLDRISYGINGGNMYEPS 187
Query: 216 GFVGEMYGGCDLIRSISGP-SEADKPMIVELAVAAMEEFLRMAQAGDPLW 264
G +I+ P +E D ++ E+A +A+EE R+ A + W
Sbjct: 188 SSYGPP--NFQIIQP--RPLAETDMSLLSEIAASAVEELKRLFLAEEQFW 233
>TAIR|locus:2167230 [details] [associations]
symbol:HDG9 "AT5G17320" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 EMBL:AB005238 ProtClustDB:CLSN2679643
IPI:IPI00529269 RefSeq:NP_197234.1 UniGene:At.54882
ProteinModelPortal:Q9FFI0 SMR:Q9FFI0 EnsemblPlants:AT5G17320.1
GeneID:831598 KEGG:ath:AT5G17320 TAIR:At5g17320 eggNOG:KOG0493
InParanoid:Q9FFI0 PhylomeDB:Q9FFI0 Genevestigator:Q9FFI0
Uniprot:Q9FFI0
Length = 718
Score = 628 (226.1 bits), Expect = 4.4e-101, Sum P(3) = 4.4e-101
Identities = 150/406 (36%), Positives = 222/406 (54%)
Query: 269 QWSSVFCGIVSRAMTIEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQHS 328
+W+ +F IV+ A TI VL + V +V+ + + SPLVP RE +R C+Q
Sbjct: 315 KWARLFPTIVNEAKTIHVLDS-VDHRGKTFSRVIYEQLHILSPLVPPREFMILRTCQQIE 373
Query: 329 DGTWAVVDVS--LDNLRPSPTSK-CRRRPSGCLIQELPNGYSKVIWVEHVEVDDRSV--H 383
D W + DVS L N+ + C +RPSG LIQ LP+G+SKV W+EHV V+D V H
Sbjct: 374 DNVWMIADVSCHLPNIEFDLSFPICTKRPSGVLIQALPHGFSKVTWIEHVVVNDNRVRPH 433
Query: 384 NIYKPLVNSGLAFGAKRWVATLDRQCERLA-SSMANNIPAGDLC-VITSPEGRKSMLKLA 441
+Y+ L+ G +GA+RW TL+R CERL S+ +P D V+ + GR S++ L
Sbjct: 434 KLYRDLLYGGFGYGARRWTVTLERTCERLIFSTSVPALPNNDNPGVVQTIRGRNSVMHLG 493
Query: 442 ERMVTSFCTGVGASTAHAWTTLSATGSDDVRVMTRKSMDDPGRPPGIVLSAATSFWIPVP 501
ERM+ +F + ++ S T + +R+ R + ++ G+PPG+++ A +S +P+P
Sbjct: 494 ERMLRNFAWMMKMVNKLDFSPQSETNNSGIRIGVRIN-NEAGQPPGLIVCAGSSLSLPLP 552
Query: 502 PRRIFDFLRDENSRSEWDILSNGGLVQEMAHIANGRDPGNCVSLLRVNSANSSQSNMLVL 561
P +++DFL++ R +WD+L +G E A G +P N VS L S + +++L
Sbjct: 553 PVQVYDFLKNLEVRHQWDVLCHGNPATEAARFVTGSNPRNTVSFLEP-SIRDINTKLMIL 611
Query: 562 QESCTDSTGSYVIYAPVDIVAMNMVLSGG-DPDYVALLPSGFAILPDGPGFNXXXXXXXX 620
Q+S D+ G V YAP+D+ +SG DP + +LPSGF I DG
Sbjct: 612 QDSFKDALGGMVAYAPMDLNTACAAISGDIDPTTIPILPSGFMISRDG---RPSEGEAEG 668
Query: 621 XXXXXXTVAFQILVDSV---PTAKLSLGSVATVNSLIKCTVERIKA 663
TVAFQILV P L + S TVN+LI TV+RIKA
Sbjct: 669 GSYTLLTVAFQILVSGPSYSPDTNLEV-SATTVNTLISSTVQRIKA 713
Score = 359 (131.4 bits), Expect = 4.4e-101, Sum P(3) = 4.4e-101
Identities = 69/153 (45%), Positives = 95/153 (62%)
Query: 50 DQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNK 109
D + + ++K YHRHT QI +E +FKECPHPD+ QR+ L EL L+P Q+KFWFQNK
Sbjct: 18 DANTNNRHEKKGYHRHTNEQIHRLETYFKECPHPDEFQRRLLGEELNLKPKQIKFWFQNK 77
Query: 110 RTQMKAQHERHENQILKAENQKLRAENNRYKEALGNATCPNCGGPAALGEMSFDE-QHLR 168
RTQ K+ +E+ +N L+AEN K+R EN ++AL N CP CGG E Q LR
Sbjct: 78 RTQAKSHNEKADNAALRAENIKIRRENESMEDALNNVVCPPCGGRGPGREDQLRHLQKLR 137
Query: 169 IENARLREEIDRISGIAAKYVGKPLSSFPHLTP 201
+NA L++E +R+S +Y G + + TP
Sbjct: 138 AQNAYLKDEYERVSNYLKQYGGHSMHNV-EATP 169
Score = 49 (22.3 bits), Expect = 4.4e-101, Sum P(3) = 4.4e-101
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 235 SEADKPMIVELAVAAMEEFLRMAQAGDPLW 264
S+ +K ++E A A+ E L + Q D +W
Sbjct: 232 SQLEKIAMLEAAEKAVSEVLSLIQMDDTMW 261
>TAIR|locus:2131814 [details] [associations]
symbol:FWA "AT4G25530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006349 "regulation of gene expression by genetic
imprinting" evidence=IEP] [GO:0031047 "gene silencing by RNA"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009909 "regulation of flower development" evidence=IEP;RCA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0048573 "photoperiodism, flowering" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA] [GO:0009911
"positive regulation of flower development" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0007275
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:AL022197 EMBL:AL161563
Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 GO:GO:0009911 GO:GO:0031047 HOGENOM:HOG000243256
GO:GO:0006349 EMBL:AF178688 EMBL:AF243535 IPI:IPI00545721
PIR:A85295 RefSeq:NP_567722.1 UniGene:At.2139
ProteinModelPortal:Q9FVI6 SMR:Q9FVI6 IntAct:Q9FVI6 STRING:Q9FVI6
PaxDb:Q9FVI6 PRIDE:Q9FVI6 EnsemblPlants:AT4G25530.1 GeneID:828658
KEGG:ath:AT4G25530 TAIR:At4g25530 eggNOG:NOG295539
InParanoid:Q9FVI6 PhylomeDB:Q9FVI6 Genevestigator:Q9FVI6
GermOnline:AT4G25530 Uniprot:Q9FVI6
Length = 686
Score = 735 (263.8 bits), Expect = 1.8e-99, Sum P(2) = 1.8e-99
Identities = 159/402 (39%), Positives = 237/402 (58%)
Query: 266 DQNQWSSVFCGIVSRAMTIEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCK 325
D +W +VF IV A T +VLSTG G +G+LQ + AEFQV SPLVP R+ F+RYCK
Sbjct: 290 DTGKWVNVFAPIVPVASTHKVLSTGSGGTKSGSLQQIQAEFQVISPLVPKRKVTFIRYCK 349
Query: 326 QHSDGTWAVVDVS-LDNLRPSPTSKCRRRPSGCLIQELPNGYSKVIWVEHVEVDDRSVHN 384
+ G W VVDV+ N P +R PSG +I +L NGYS+V W+E E ++ +H
Sbjct: 350 EIRQGLWVVVDVTPTQNPTLLPYGCSKRLPSGLIIDDLSNGYSQVTWIEQAEYNESHIHQ 409
Query: 385 IYKPLVNSGLAFGAKRWVATLDRQCERLASSMANNIPAGDLCVITSPEGRKSMLKLAERM 444
+Y+PL+ G+ GAKRW+ATL R CE L++ + N+ ++ S +G ++KLA+RM
Sbjct: 410 LYQPLIGYGIGLGAKRWLATLQRHCESLSTLSSTNLT--EISPGLSAKGATEIVKLAQRM 467
Query: 445 VTSFCTGVGASTAHAWTTLSATG-SDDVRVMTRKSMDDPGRPPGIVLSAATSFWIPVPPR 503
++ G+ + + W + + ++ M RK++++PG GIVLSA+TS W+PV
Sbjct: 468 TLNYYRGITSPSVDKWQKIQVENVAQNMSFMIRKNVNEPGELTGIVLSASTSVWLPVNQH 527
Query: 504 RIFDFLRDENSRSEWDILSNGGLVQEMAHIANGRDPGNCVSLLRVNSANSSQSNMLVLQE 563
+F F+ + R EWDIL+N ++E I + GN +SLL++ N+ MLVLQE
Sbjct: 528 TLFAFISHLSFRHEWDILTNDTTMEETIRIQKAKRHGNIISLLKI--VNNG---MLVLQE 582
Query: 564 SCTDSTGSYVIYAPVDIVAMNMVLSGGDPDYVALLPSGFAILPDGPGFNXXXXXXXXXXX 623
D++G+ V+YAPV+ ++ +V G + D V LPSGF+I+PDG N
Sbjct: 583 IWNDASGAMVVYAPVETNSIELVKRGENSDSVKFLPSGFSIVPDG--VNGSYHRGNTGGG 640
Query: 624 XXXTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAAV 665
T QILV PTA L G+V +V +L+ T+ +IK+A+
Sbjct: 641 CLLTFGLQILVGINPTAALIQGTVKSVETLMAHTIVKIKSAL 682
Score = 272 (100.8 bits), Expect = 1.8e-99, Sum P(2) = 1.8e-99
Identities = 72/229 (31%), Positives = 112/229 (48%)
Query: 37 GTETMEMEAPSG-DDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSREL 95
G E + SG +DQD + +R HR T Q QE+E F+ E PHP ++QR EL + L
Sbjct: 21 GDEIDMINDMSGVNDQDGG---RMRRTHRRTAYQTQELENFYMENPHPTEEQRYELGQRL 77
Query: 96 GLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKLRAENNRYKEALGNATCPNCGGPA 155
+ QVK WFQNKR K ++ EN L+ E+ +L A ++ + A+ + C CG
Sbjct: 78 NMGVNQVKNWFQNKRNLEKINNDHLENVTLREEHDRLLATQDQLRSAMLRSLCNICGKAT 137
Query: 156 ALGEMSFDEQHLRIENARLREEIDRISGIAAKYVGKPLSSFPHLTPRSLDLGFTNLGTQS 215
G+ ++ Q L ENA L EID+ + ++Y+ P T +N G +
Sbjct: 138 NCGDTEYEVQKLMAENANLEREIDQFN---SRYLSHPKQRMVS-TSEQAPSSSSNPGINA 193
Query: 216 GFVGEMYGGCDLIRSISGPSEADKPMIVELAVAAMEEFLRMAQAGDPLW 264
V + GG R+ SE + + + LA+ A+ E + + + P W
Sbjct: 194 TPVLDFSGGT---RT----SEKETSIFLNLAITALRELITLGEVDCPFW 235
>TAIR|locus:2023932 [details] [associations]
symbol:HDG10 "AT1G34650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 EMBL:AC007894 EMBL:AC023279
IPI:IPI00526139 PIR:B86470 RefSeq:NP_174724.1 UniGene:At.51941
ProteinModelPortal:Q9S9Z0 SMR:Q9S9Z0 EnsemblPlants:AT1G34650.1
GeneID:840369 KEGG:ath:AT1G34650 TAIR:At1g34650 InParanoid:Q9S9Z0
PhylomeDB:Q9S9Z0 ProtClustDB:CLSN2679643 Genevestigator:Q9S9Z0
Uniprot:Q9S9Z0
Length = 708
Score = 601 (216.6 bits), Expect = 3.3e-93, Sum P(3) = 3.3e-93
Identities = 144/410 (35%), Positives = 222/410 (54%)
Query: 263 LWTDQNQWSSVFCGIVSRAMTIEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVR 322
++ + +W+ +F IV+ A TI VL + + +V+ + + SPLV RE +R
Sbjct: 302 MFLNTEKWARLFPTIVTEAKTIHVLDSMDHPRQTFS-RVVYEQLHILSPLVLPREFIILR 360
Query: 323 YCKQHSDGTWAVVDVS--LDNLRPSPTSK-CRRRPSGCLIQELPNGYSKVIWVEHVEVDD 379
C+Q + W + DVS L N+ T+ C +RPSG LIQ LP+G SKV W+EHVEV D
Sbjct: 361 TCQQMKEDLWLIADVSCYLQNVEFESTAPICTKRPSGVLIQALPHGRSKVTWIEHVEVTD 420
Query: 380 RS-VHNIYKPLVNSGLAFGAKRWVATLDRQCERLASSMANNIPAGDLC-VITSPEGRKSM 437
+ H +Y+ L+ G +GA+RW ATL R CERL+ + P D V+ + EGR+S+
Sbjct: 421 KVWPHQLYRDLLYGGFGYGARRWTATLQRMCERLSLYSMTDFPPTDYPGVVKTIEGRRSV 480
Query: 438 LKLAERMVTSFCTGVGASTAHAWTTLSATGSDDVRVMTRKSMDDPGRPPGIVLSAATSFW 497
+ L ERM+ +F + S S + VR+ R + + G+PPG+++ A +S
Sbjct: 481 MSLGERMLKNFAWIMKMSDKLDLPQQSGANNSGVRISVRTNTE-AGQPPGLIVCAGSSLS 539
Query: 498 IPVPPRRIFDFLRDENSRSEWDILSNGGLVQEMAHIANGRDPGNCVSLLRVNSANSSQSN 557
+P+PP +++DFLR+ R +WD+ G V E A G D N V+ L+ +S +
Sbjct: 540 LPLPPLQVYDFLRNLEVRHQWDVHCQGNPVTEAARFVTGPDQKNNVTFLQPSSVG--EYK 597
Query: 558 MLVLQESCTDSTGSYVIYAPVDIVAMNMVLSGG-DPDYVALLPSGFAILPDGPGFNXXXX 616
+++LQ+ D+ G V+YAP+++ +SG DP + +LPSGF I D +
Sbjct: 598 LMILQDGFIDALGGMVVYAPMNLNTAYSAISGQVDPSTIPILPSGFIISRDS---HPSSS 654
Query: 617 XXXXXXXXXXTVAFQILVDSVPT--AKLSL-GSVATVNSLIKCTVERIKA 663
T+AFQI V P+ L+L S TVN+L+ V+RIKA
Sbjct: 655 EVDGGSMTLLTLAFQIFVTG-PSYYTDLNLKDSATTVNTLVSSAVQRIKA 703
Score = 320 (117.7 bits), Expect = 3.3e-93, Sum P(3) = 3.3e-93
Identities = 69/182 (37%), Positives = 97/182 (53%)
Query: 43 MEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQV 102
M++ D + H+ Q+Q +EAFF ECPHPDD QR++L EL L+ Q+
Sbjct: 1 MDSSHNDSSSDEEGIDSNNRRHHSNHQVQRLEAFFHECPHPDDSQRRQLGNELNLKHKQI 60
Query: 103 KFWFQNKRTQMKAQHERHENQILKAENQKLRAENNRYKEALGNATCPNCGGPAALGEMSF 162
KFWFQN+RTQ + +E+ +N L+ EN K+R N ++AL CP CGGP E
Sbjct: 61 KFWFQNRRTQARIHNEKADNIALRVENMKIRCVNEAMEKALETVLCPPCGGPHGKEEQLC 120
Query: 163 DEQHLRIENARLREEIDRISGIAAKYVGKPLSSFPHLTPRSLDL-GFTNLGTQSGFVGEM 221
+ Q LR +N L+ E +R+S K+ G + S L P DL G + G+ S
Sbjct: 121 NLQKLRTKNVILKTEYERLSSYLTKHGGYSIPSVDAL-P---DLHGPSTYGSTSNNRPAS 176
Query: 222 YG 223
YG
Sbjct: 177 YG 178
Score = 40 (19.1 bits), Expect = 3.3e-93, Sum P(3) = 3.3e-93
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 227 LIRSISGPSEADKPMIVELAVAAMEEFLRMAQAGDPLW 264
L++ S+ +K + E+A A+ E + + Q +W
Sbjct: 210 LLQHFQQLSQLEKNRMFEIAKNAVAEVMSLIQMEHSMW 247
>TAIR|locus:2182850 [details] [associations]
symbol:AT5G07260 "AT5G07260" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] INTERPRO:IPR002913 EMBL:CP002688
GenomeReviews:BA000015_GR Pfam:PF01852 PROSITE:PS50848
EMBL:BT003974 EMBL:BT005131 IPI:IPI00531581 RefSeq:NP_196343.2
UniGene:At.23335 ProteinModelPortal:Q84JD1 PaxDb:Q84JD1
EnsemblPlants:AT5G07260.1 GeneID:830617 KEGG:ath:AT5G07260
TAIR:At5g07260 HOGENOM:HOG000147055 InParanoid:Q84JD1
PhylomeDB:Q84JD1 ProtClustDB:CLSN2686056 ArrayExpress:Q84JD1
Genevestigator:Q84JD1 Uniprot:Q84JD1
Length = 541
Score = 317 (116.6 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 102/353 (28%), Positives = 166/353 (47%)
Query: 270 WSSVFCGIVSRAMTIEVLSTGVAGNYNGALQVMTAEFQVP-SPLVPTRENYFVRYCKQHS 328
W +F I++ +++E G LQ + F SPL+ TR +R +
Sbjct: 168 WQKIFPSIIAD-VSVESQQRG--------LQKINVNFMPQISPLIQTRNVKLLRRSRHIE 218
Query: 329 DGTWAVVDVSL------DNLRPSPTSKCRRRPSGCLIQELPNGYSKVIWVEHVEVDDRSV 382
D TWA+ ++S+ +LRP + R PSG LIQ + NG SKV ++H +
Sbjct: 219 DDTWAIAEISMYFSSYAQHLRP----EYMRFPSGYLIQHIANGISKVTILDHWVYKEEEG 274
Query: 383 HNIYKPLVNSGLAFGAKRWVATLDRQ----CERLASSMANNIPAGD-LCVITSPEGRKSM 437
N + NS FGA+RW+ L + C S+ +NI D +C RK++
Sbjct: 275 MNTF----NSNSEFGAQRWLTALQKHYYNTCPVSIPSIGHNIQIFDQIC-------RKNL 323
Query: 438 LKLAERMVTSFCTGVGASTAHAWTTLSATG--SDDVRVMTRKSMDDPGRPPGIVLSAATS 495
L L+ MV FC+GV T W L+ G ++++R+ T++S G P +++SA
Sbjct: 324 LNLSSFMVNVFCSGVCGITGQRWNRLNTVGVSANNIRMFTQESRGMSGIPC-VLVSATGL 382
Query: 496 FWIPVPPRRIFDFLRDENSRSEWDILSNGGLVQEMAHIANGRDPG--NCVSLLRVNSANS 553
+ P +F + + W L + ++E+ I GR P N VS+ + S
Sbjct: 383 ARMHTKPEVMFGLINGAEKQEIWSYLESAKDMKELIRI--GRHPNSWNEVSVFSIEWKGS 440
Query: 554 SQSNMLVLQESCTDSTGSYVIYAPVDIVAMNMVLSGGDPDYVALLPSGFAILP 606
+ ++QE+ D +G+ +I+ V+ ++GGD V LLPSGF I+P
Sbjct: 441 KE--WYLIQETYYDESGAMIIHTCVEAPYFAAAINGGDLSGVELLPSGFTIIP 491
Score = 91 (37.1 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 31/97 (31%), Positives = 49/97 (50%)
Query: 117 HERHENQILKAENQKLRAENNRYKEALGNAT-CPNCGGPAALGEMSFDEQHLRIENARLR 175
H L +N LRAEN A+ + + C +C P +S +E+ L +ENARLR
Sbjct: 3 HHLQTRIFLHQQNDLLRAENRARIHAMTSPSICRSCEEPI----ISTEERELWLENARLR 58
Query: 176 EEIDRISGIAAKYVGKPLSSFPHLTPRSLDLGFTNLG 212
EID ++ ++ + L+SF +L P + T +G
Sbjct: 59 SEIDTLTC----FIWR-LNSFRNLYP-AFATSLTEVG 89
>TAIR|locus:2061544 [details] [associations]
symbol:PHB "AT2G34710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA;IMP] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA;IMP] [GO:0010014 "meristem
initiation" evidence=RCA;IMP] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA;IMP] [GO:0080060 "integument
development" evidence=IGI] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010075 "regulation of meristem growth" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0010162
"seed dormancy process" evidence=RCA] [GO:0010182 "sugar mediated
signaling pathway" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010431 "seed maturation" evidence=RCA] [GO:0010564 "regulation
of cell cycle process" evidence=RCA] [GO:0016049 "cell growth"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0019915 "lipid storage" evidence=RCA] [GO:0033044 "regulation
of chromosome organization" evidence=RCA] [GO:0042138 "meiotic DNA
double-strand break formation" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048366 "leaf development"
evidence=RCA] [GO:0048589 "developmental growth" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0048825 "cotyledon development" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
[GO:0009955 "adaxial/abaxial pattern specification" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
GO:GO:0030154 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 EMBL:AC003096
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
GO:GO:0009855 GO:GO:0009944 KO:K09338 EMBL:Y11122 EMBL:AJ441291
EMBL:AY099791 EMBL:BT000335 IPI:IPI00538463 PIR:T01364
RefSeq:NP_181018.1 UniGene:At.37771 HSSP:P10037
ProteinModelPortal:O04291 SMR:O04291 IntAct:O04291 STRING:O04291
PaxDb:O04291 PRIDE:O04291 EnsemblPlants:AT2G34710.1 GeneID:818036
KEGG:ath:AT2G34710 TAIR:At2g34710 eggNOG:NOG264261
HOGENOM:HOG000272677 InParanoid:O04291 OMA:NRKLNAM PhylomeDB:O04291
ProtClustDB:CLSN2679470 Genevestigator:O04291 GO:GO:0080060
InterPro:IPR013978 Pfam:PF08670 Uniprot:O04291
Length = 852
Score = 190 (71.9 bits), Expect = 3.5e-22, Sum P(3) = 3.5e-22
Identities = 67/256 (26%), Positives = 114/256 (44%)
Query: 283 TIEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQHSDGTWAVVDVSLDNL 342
+++ LS AGN G ++++ + P+ L R+ + +RY DG++ V + SL +
Sbjct: 249 SVDTLSVIPAGN-GGTIELIYTQMYAPTTLAAARDFWTLRYSTCLEDGSYVVCERSLTSA 307
Query: 343 RPSPTS-------KCRRRPSGCLIQELPNGYSKVIWVEHVEVDDRSVHNIYKPLVNSGLA 395
PT + +PSG LI+ G S + V+HV++D SV + +PL S
Sbjct: 308 TGGPTGPPSSNFVRAEMKPSGFLIRPCDGGGSILHIVDHVDLDAWSVPEVMRPLYESSKI 367
Query: 396 FGAKRWVATLDRQCERLASSMANNIPAGDLCVITSPEGRK-SMLK-LAERMVTSFCTGVG 453
K VA L R ++A + + G GR+ ++L+ ++R+ F V
Sbjct: 368 LAQKMTVAAL-RHVRQIAQETSGEVQYGG--------GRQPAVLRTFSQRLCRGFNDAVN 418
Query: 454 ASTAHAWTTLSATGSDDVRVMTRKSMDD-----------PGRPPGIVLSAATSFWIPVPP 502
W+ + + G++DV VM S P G++ + A+ VPP
Sbjct: 419 GFVDDGWSPMGSDGAEDVTVMINLSPGKFGGSQYGNSFLPSFGSGVLCAKASMLLQNVPP 478
Query: 503 RRIFDFLRDENSRSEW 518
+ FLR+ RSEW
Sbjct: 479 AVLVRFLREH--RSEW 492
Score = 155 (59.6 bits), Expect = 3.5e-22, Sum P(3) = 3.5e-22
Identities = 35/108 (32%), Positives = 57/108 (52%)
Query: 51 QDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWF 106
+ P + +Y R+T Q++ +E + ECP P +R++L RE +EP Q+K WF
Sbjct: 15 ESPDKGLDSGKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWF 74
Query: 107 QNKRTQMKAQHERHE----NQILKAENQKLRAENNRYKEALGNATCPN 150
QN+R + K + E N+ L A N+ L EN+R ++ + N N
Sbjct: 75 QNRRCREKQRKEAARLQTVNRKLNAMNKLLMEENDRLQKQVSNLVYEN 122
Score = 45 (20.9 bits), Expect = 3.5e-22, Sum P(3) = 3.5e-22
Identities = 9/14 (64%), Positives = 10/14 (71%)
Query: 593 DYVALLPSGFAILP 606
D LLPSGF I+P
Sbjct: 591 DDAPLLPSGFRIIP 604
Score = 39 (18.8 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 6/12 (50%), Positives = 10/12 (83%)
Query: 473 VMTRKSMDDPGR 484
+M K++D+PGR
Sbjct: 780 IMLDKTLDEPGR 791
>TAIR|locus:2028140 [details] [associations]
symbol:PHV "AT1G30490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009943 "adaxial/abaxial axis specification"
evidence=IMP] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA;IMP] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA;IMP] [GO:0010014 "meristem
initiation" evidence=RCA;IMP] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009880 "embryonic pattern
specification" evidence=IGI] [GO:0080060 "integument development"
evidence=IGI] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010051
"xylem and phloem pattern formation" evidence=RCA] [GO:0010073
"meristem maintenance" evidence=RCA] [GO:0010075 "regulation of
meristem growth" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0045010 "actin nucleation" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0030154 GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 EMBL:AC009917
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
GO:GO:0009855 GO:GO:0009880 GO:GO:0009944 KO:K09338 HSSP:P10037
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 GO:GO:0080060
InterPro:IPR013978 Pfam:PF08670 EMBL:Y10922 EMBL:AJ440967
EMBL:AK221046 EMBL:AK226570 IPI:IPI00523245 PIR:H86429
RefSeq:NP_174337.1 UniGene:At.27961 UniGene:At.33151
ProteinModelPortal:O04292 SMR:O04292 IntAct:O04292 STRING:O04292
PRIDE:O04292 EnsemblPlants:AT1G30490.1 GeneID:839928
KEGG:ath:AT1G30490 TAIR:At1g30490 eggNOG:NOG326783
InParanoid:O04292 OMA:ICRSYRI PhylomeDB:O04292
Genevestigator:O04292 Uniprot:O04292
Length = 841
Score = 172 (65.6 bits), Expect = 5.9e-21, Sum P(3) = 5.9e-21
Identities = 61/255 (23%), Positives = 109/255 (42%)
Query: 284 IEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQHSDGTWAVVDVSLDNLR 343
+E L+ GN G ++++ + P+ L R+ + +RY DG++ V + SL +
Sbjct: 246 VETLNVIPTGN-GGTIELVNTQIYAPTTLAAARDFWTLRYSTSLEDGSYVVCERSLTSAT 304
Query: 344 PSPTS-------KCRRRPSGCLIQELPNGYSKVIWVEHVEVDDRSVHNIYKPLVNSGLAF 396
P + + SG LI+ G S + V+HV++D SV + +PL S
Sbjct: 305 GGPNGPLSSSFVRAKMLSSGFLIRPCDGGGSIIHIVDHVDLDVSSVPEVLRPLYESSKIL 364
Query: 397 GAKRWVATLDRQCERLASSMANNIPAGDLCVITSPEGRK-SMLK-LAERMVTSFCTGVGA 454
K VA L R ++A + + GR+ ++L+ ++R+ F V
Sbjct: 365 AQKMTVAAL-RHVRQIAQETSGEVQYSG--------GRQPAVLRTFSQRLCRGFNDAVNG 415
Query: 455 STAHAWTTLSATGSDDVRVMTRKSMDD-----------PGRPPGIVLSAATSFWIPVPPR 503
W+ +S+ G +D+ +M S P G++ + A+ VPP
Sbjct: 416 FVDDGWSPMSSDGGEDITIMINSSSAKFAGSQYGSSFLPSFGSGVLCAKASMLLQNVPPL 475
Query: 504 RIFDFLRDENSRSEW 518
+ FLR+ R+EW
Sbjct: 476 VLIRFLREH--RAEW 488
Score = 163 (62.4 bits), Expect = 5.9e-21, Sum P(3) = 5.9e-21
Identities = 39/113 (34%), Positives = 61/113 (53%)
Query: 47 SGDDQD-PSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQ 101
S DD+D P + +Y R+T Q++ +E + ECP P +R++L RE +EP Q
Sbjct: 6 SMDDRDSPDKGFDSGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNIEPRQ 65
Query: 102 VKFWFQNKRTQMKAQHERHE----NQILKAENQKLRAENNRYKEALGNATCPN 150
+K WFQN+R + K + E N+ L A N+ L EN+R ++ + N N
Sbjct: 66 IKVWFQNRRCREKQRKESARLQTVNRKLSAMNKLLMEENDRLQKQVSNLVYEN 118
Score = 44 (20.5 bits), Expect = 5.9e-21, Sum P(3) = 5.9e-21
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 593 DYVALLPSGFAILP 606
D LLPSGF ++P
Sbjct: 587 DDAPLLPSGFRVIP 600
>TAIR|locus:2175856 [details] [associations]
symbol:REV "AT5G60690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0008289 "lipid binding" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0010014
"meristem initiation" evidence=RCA;IMP] [GO:0009956 "radial pattern
formation" evidence=IMP] [GO:0010051 "xylem and phloem pattern
formation" evidence=RCA;IMP] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA;IMP] [GO:0009944 "polarity
specification of adaxial/abaxial axis" evidence=RCA;IMP]
[GO:0007155 "cell adhesion" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=RCA] [GO:0010075 "regulation of meristem growth"
evidence=RCA] [GO:0010090 "trichome morphogenesis" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] [GO:0048589 "developmental growth"
evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030154 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:AB005246 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 GO:GO:0010051 GO:GO:0009855
GO:GO:0009944 KO:K09338 HSSP:P10037 ProtClustDB:CLSN2679470
InterPro:IPR013978 Pfam:PF08670 GO:GO:0009956 GO:GO:0010014
EMBL:AF188994 EMBL:AY170127 EMBL:AF233592 EMBL:AK229564
EMBL:EF598684 EMBL:EF598685 EMBL:EF598686 EMBL:EF598687
EMBL:EF598688 EMBL:EF598689 EMBL:EF598690 EMBL:EF598691
EMBL:EF598692 EMBL:EF598693 EMBL:EF598694 EMBL:EF598695
EMBL:EF598696 EMBL:EF598697 EMBL:EF598698 EMBL:EF598699
EMBL:EF598700 EMBL:EF598701 EMBL:EF598702 EMBL:EF598703
EMBL:EF598704 EMBL:EF598705 EMBL:EF598706 IPI:IPI00531930
RefSeq:NP_200877.1 UniGene:At.49201 UniGene:At.7238
ProteinModelPortal:Q9SE43 SMR:Q9SE43 STRING:Q9SE43 PaxDb:Q9SE43
PRIDE:Q9SE43 EnsemblPlants:AT5G60690.1 GeneID:836190
KEGG:ath:AT5G60690 TAIR:At5g60690 eggNOG:NOG323815
InParanoid:Q9M5B6 OMA:TIELVYM PhylomeDB:Q9SE43
Genevestigator:Q9SE43 Uniprot:Q9SE43
Length = 842
Score = 161 (61.7 bits), Expect = 9.6e-20, Sum P(3) = 9.6e-20
Identities = 63/251 (25%), Positives = 113/251 (45%)
Query: 283 TIEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQHSDGTWAVVDVSLDNL 342
++EV + AGN G ++++ + P+ L P R+ + +RY +G++ V + SL
Sbjct: 236 SLEVFTMFPAGN-GGTIELVYMQTYAPTTLAPARDFWTLRYTTSLDNGSFVVCERSLSGS 294
Query: 343 RPSPTS-------KCRRRPSGCLIQELPNGYSKVIWVEHVEVDDRSVHNIYKPLVNSGLA 395
P + + SG LI+ G S + V+H+ ++ SV ++ +PL S
Sbjct: 295 GAGPNAASASQFVRAEMLSSGYLIRPCDGGGSIIHIVDHLNLEAWSVPDVLRPLYESSKV 354
Query: 396 FGAKRWVATLDRQCERLASSMANNIPAGDLCVITSPEGRK-SMLK-LAERMVTSFCTGVG 453
K ++ L R +LA + G GR+ ++L+ ++R+ F V
Sbjct: 355 VAQKMTISAL-RYIRQLAQESNGEVVYG--------LGRQPAVLRTFSQRLSRGFNDAVN 405
Query: 454 ASTAHAWTTLSATGSDD--VRVMTRKSMDDPGRPP---GIVLSAATSFWIP-VPPRRIFD 507
W+T+ G++D V + + K +++ G VL A S + VPP +
Sbjct: 406 GFGDDGWSTMHCDGAEDIIVAINSTKHLNNISNSLSFLGGVLCAKASMLLQNVPPAVLIR 465
Query: 508 FLRDENSRSEW 518
FLR+ RSEW
Sbjct: 466 FLREH--RSEW 474
Score = 159 (61.0 bits), Expect = 9.6e-20, Sum P(3) = 9.6e-20
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 61 RYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGL----EPLQVKFWFQNKRTQMKAQ 116
+Y R+T Q++ +E + ECP P +R++L RE + EP Q+K WFQN+R + K +
Sbjct: 25 KYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECSILANIEPKQIKVWFQNRRCRDKQR 84
Query: 117 HERHE----NQILKAENQKLRAENNRYKEALGNATCPN 150
E N+ L A N+ L EN+R ++ + C N
Sbjct: 85 KEASRLQSVNRKLSAMNKLLMEENDRLQKQVSQLVCEN 122
Score = 48 (22.0 bits), Expect = 9.6e-20, Sum P(3) = 9.6e-20
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 592 PDYVALLPSGFAILP 606
PD L+PSGF ++P
Sbjct: 572 PDDAPLVPSGFRVIP 586
Score = 45 (20.9 bits), Expect = 1.9e-19, Sum P(3) = 1.9e-19
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 593 DYVALLPSGFAILPDG 608
D+ L+ GFA LP G
Sbjct: 783 DFAKLMQQGFACLPSG 798
>TAIR|locus:2134088 [details] [associations]
symbol:HB-8 "AT4G32880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0010089 "xylem development"
evidence=RCA;IMP] [GO:0045597 "positive regulation of cell
differentiation" evidence=IMP] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0010014 "meristem initiation"
evidence=RCA;IMP] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA;IMP] [GO:0010067 "procambium
histogenesis" evidence=IEP] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009880 "embryonic pattern specification" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010431 "seed maturation" evidence=RCA] [GO:0010638 "positive
regulation of organelle organization" evidence=RCA] [GO:0016049
"cell growth" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042546 "cell wall biogenesis"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] [GO:0045010 "actin nucleation" evidence=RCA]
[GO:0045595 "regulation of cell differentiation" evidence=RCA]
[GO:0048589 "developmental growth" evidence=RCA] [GO:0048765 "root
hair cell differentiation" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] InterPro:IPR001356 InterPro:IPR004827
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00338 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
GO:GO:0030154 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733
GO:GO:0008284 GO:GO:0043565 GO:GO:0045597 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 GO:GO:0010089 KO:K09338 HSSP:P10037
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 InterPro:IPR013978
Pfam:PF08670 EMBL:AL161582 EMBL:Z50851 EMBL:AJ441292 EMBL:AY099631
EMBL:BT008798 IPI:IPI00546637 PIR:T10695 RefSeq:NP_195014.1
UniGene:At.31628 ProteinModelPortal:Q39123 SMR:Q39123 IntAct:Q39123
STRING:Q39123 PaxDb:Q39123 PRIDE:Q39123 EnsemblPlants:AT4G32880.1
GeneID:829424 KEGG:ath:AT4G32880 TAIR:At4g32880 eggNOG:NOG325934
InParanoid:Q39123 OMA:DAVMCCS PhylomeDB:Q39123
Genevestigator:Q39123 GO:GO:0010067 Uniprot:Q39123
Length = 833
Score = 164 (62.8 bits), Expect = 7.4e-19, Sum P(3) = 7.4e-19
Identities = 69/256 (26%), Positives = 113/256 (44%)
Query: 284 IEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQHSDGTWAVVDVSLDNLR 343
+ VLST N G L+++ + P+ L P R+ + +RY DG+ + + SL+N +
Sbjct: 239 VNVLSTA---N-GGTLELIYMQLYAPTTLAPARDFWMLRYTSVMEDGSLVICERSLNNTQ 294
Query: 344 --PS-PTS----KCRRRPSGCLIQELPNGYSKVIWVEHVEVDDRSVHNIYKPLVNSGLAF 396
PS P S + PSG LI+ G S + V+H +++ SV + + L S
Sbjct: 295 NGPSMPPSPHFVRAEILPSGYLIRPCEGGGSILHIVDHFDLEPWSVPEVLRSLYESSTLL 354
Query: 397 GAKRWVATLDRQCERLASSMANNIPAGDLCVITSPEGRKSMLK-LAERMVTSFCTGVGAS 455
+ +A L R +++ ++ P +T R + L+ L++R+ F V
Sbjct: 355 AQRTTMAAL-RYLRQISQEISQ--PN-----VTGWGRRPAALRALSQRLSKGFNEAVNGF 406
Query: 456 TAHAWTTLSATGSDDVRVMTRKS----MDDPGRP--------PGIVLSAATSFWIP-VPP 502
+ W+ L + G DDV ++ S M P P VL A S + VPP
Sbjct: 407 SDEGWSILESDGIDDVTLLVNSSPTKMMMTSSLPFANGYTSMPSAVLCAKASMLLQNVPP 466
Query: 503 RRIFDFLRDENSRSEW 518
+ FLR+ R EW
Sbjct: 467 SILLRFLREH--RQEW 480
Score = 152 (58.6 bits), Expect = 7.4e-19, Sum P(3) = 7.4e-19
Identities = 34/98 (34%), Positives = 53/98 (54%)
Query: 48 GDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVK 103
G + S + +Y R+T Q++ +E + +CP P +R++L RE +EP Q+K
Sbjct: 2 GGGSNNSHNMDNGKYVRYTPEQVEALERLYNDCPKPSSMRRQQLIRECPILSNIEPKQIK 61
Query: 104 FWFQNKRTQMKAQHERHENQILKAENQKLRAENNRYKE 141
WFQN+R + K +R E L+A N+KL A N E
Sbjct: 62 VWFQNRRCREK---QRKEASRLQAVNRKLTAMNKLLME 96
Score = 60 (26.2 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 33/122 (27%), Positives = 52/122 (42%)
Query: 85 DKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQI--LKAENQKLRAENNRYKEA 142
+KQRKE SR L+ + K NK + +++R + Q+ L EN R ++ +
Sbjct: 71 EKQRKEASR---LQAVNRKLTAMNKL--LMEENDRLQKQVSHLVYENSYFR----QHPQN 121
Query: 143 LGN--ATCPNCGGPAALGEMSFDEQH----------LRIENARLREEIDRISGIAAKYVG 190
GN T +C G+ QH L I + L E I + +G A ++V
Sbjct: 122 QGNLATTDTSCESVVTSGQHHLTPQHQPRDASPAGLLSIADETLTEFISKATGTAVEWVQ 181
Query: 191 KP 192
P
Sbjct: 182 MP 183
Score = 56 (24.8 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 47/215 (21%), Positives = 83/215 (38%)
Query: 402 VATLDRQCERLASSMANNIPAGDLCVITSPEGRKSMLKLAERMVTSFCTGVGASTAHAWT 461
+AT D CE + +S +++ SP G +L +A+ +T F + TA W
Sbjct: 125 LATTDTSCESVVTSGQHHLTPQHQPRDASPAG---LLSIADETLTEFISKA-TGTAVEWV 180
Query: 462 TLSAT--GSDDVRVMTRKSMDDPGRPPGIVLSAATSFWIPVPPRRIFDFLRDENSRSEWD 519
+ G D + ++ S G ++A + + P R+ + L+D+ W
Sbjct: 181 QMPGMKPGPDSIGIVAI-SHGCTG------IAARACGLVGLDPTRVAEILKDKPC---W- 229
Query: 520 ILSNGGL-VQEMAHIANGRDPGNCVSLLRVNSANSSQSNMLVLQESCTDSTGSYVIYAPV 578
+ L + + ANG L + + + +L+ + GS VI
Sbjct: 230 LRDCRSLDIVNVLSTANGGTLELIYMQLYAPTTLAPARDFWMLRYTSVMEDGSLVICERS 289
Query: 579 DIVAMNMVLSGGDPDYVA--LLPSGFAILP-DGPG 610
N P +V +LPSG+ I P +G G
Sbjct: 290 LNNTQNGPSMPPSPHFVRAEILPSGYLIRPCEGGG 324
Score = 43 (20.2 bits), Expect = 7.4e-19, Sum P(3) = 7.4e-19
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 563 ESCTDSTGSYVIYAPVDIVAMNMVLSGGDPDYVALLPSGFAILP 606
ESC + +I+AP+D D ++PSGF I+P
Sbjct: 562 ESCAE-----LIFAPID---------ASFSDDAPIIPSGFRIIP 591
>TAIR|locus:2034086 [details] [associations]
symbol:ATHB-15 "AT1G52150" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA;IMP]
[GO:0010014 "meristem initiation" evidence=RCA;IMP] [GO:0009887
"organ morphogenesis" evidence=RCA;IMP] [GO:0010073 "meristem
maintenance" evidence=RCA;TAS] [GO:0010075 "regulation of meristem
growth" evidence=RCA;IMP] [GO:0010087 "phloem or xylem
histogenesis" evidence=IMP] [GO:0048263 "determination of dorsal
identity" evidence=IMP] [GO:0080060 "integument development"
evidence=IGI] [GO:0006995 "cellular response to nitrogen
starvation" evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA]
[GO:0009944 "polarity specification of adaxial/abaxial axis"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0010089 "xylem development" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 GO:GO:0009965 GO:GO:0010087 KO:K09338
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 GO:GO:0080060
InterPro:IPR013978 Pfam:PF08670 GO:GO:0010075 GO:GO:0048263
EMBL:AC006216 GO:GO:0010014 IPI:IPI00545601 RefSeq:NP_849795.1
UniGene:At.11011 ProteinModelPortal:B3H4G8 SMR:B3H4G8 STRING:B3H4G8
PRIDE:B3H4G8 EnsemblPlants:AT1G52150.2 GeneID:841645
KEGG:ath:AT1G52150 OMA:EHVASMA Genevestigator:B3H4G8 Uniprot:B3H4G8
Length = 837
Score = 162 (62.1 bits), Expect = 3.2e-18, Sum P(3) = 3.2e-18
Identities = 64/256 (25%), Positives = 112/256 (43%)
Query: 284 IEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQHSDGTWAVVDVSLDNLR 343
+EV++ N G ++++ + P+ L P R+ + +RY DG+ V + SL + +
Sbjct: 237 VEVMNVLPTAN-GGTVELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQ 295
Query: 344 PSPTS-------KCRRRPSGCLIQELPNGYSKVIWVEHVEVDDRSVHNIYKPLVNSGLAF 396
P+ + SG LI+ G S + V+H++++ SV + +PL S
Sbjct: 296 NGPSMPLVQNFVRAEMLSSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVL 355
Query: 397 GAKRWVATLDRQCERLASSMANNIPAGDLCVITSPEGRK--SMLKLAERMVTSFCTGVGA 454
K +A L RQ +++A + + + GR+ ++ L++R+ F V
Sbjct: 356 AQKTTMAAL-RQLKQIAQEVTQTNSS------VNGWGRRPAALRALSQRLSRGFNEAVNG 408
Query: 455 STAHAWTTLSATGSDDVRVMTRKSMDD---------PGRPP--GIVLSAATSFWIP-VPP 502
T W+ + + DDV + S D G P +VL A S + VPP
Sbjct: 409 FTDEGWSVIGDS-MDDVTITVNSSPDKLMGLNLTFANGFAPVSNVVLCAKASMLLQNVPP 467
Query: 503 RRIFDFLRDENSRSEW 518
+ FLR+ RSEW
Sbjct: 468 AILLRFLREH--RSEW 481
Score = 146 (56.5 bits), Expect = 3.2e-18, Sum P(3) = 3.2e-18
Identities = 32/85 (37%), Positives = 49/85 (57%)
Query: 61 RYHRHTQRQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKAQ 116
+Y R+T Q++ +E + +CP P +R++L RE +EP Q+K WFQN+R + K
Sbjct: 17 KYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
Query: 117 HERHENQILKAENQKLRAENNRYKE 141
+R E L+A N+KL A N E
Sbjct: 75 -QRKEASRLQAVNRKLTAMNKLLME 98
Score = 53 (23.7 bits), Expect = 9.0e-09, Sum P(3) = 9.0e-09
Identities = 30/122 (24%), Positives = 49/122 (40%)
Query: 85 DKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKLRAENNRYKEALG 144
+KQRKE SR L+ + K NK EN L+ + +L EN+ +++
Sbjct: 73 EKQRKEASR---LQAVNRKLTAMNKLLM-------EENDRLQKQVSQLVHENSYFRQHTP 122
Query: 145 NATCP----NCGGPAALGEMSFDEQH----------LRIENARLREEIDRISGIAAKYVG 190
N + P +C G+ Q+ L I L E + + +G A ++V
Sbjct: 123 NPSLPAKDTSCESVVTSGQHQLASQNPQRDASPAGLLSIAEETLAEFLSKATGTAVEWVQ 182
Query: 191 KP 192
P
Sbjct: 183 MP 184
Score = 45 (20.9 bits), Expect = 3.2e-18, Sum P(3) = 3.2e-18
Identities = 9/14 (64%), Positives = 10/14 (71%)
Query: 593 DYVALLPSGFAILP 606
D LLPSGF I+P
Sbjct: 576 DDAPLLPSGFRIIP 589
>TAIR|locus:2116442 [details] [associations]
symbol:AT4G26920 "AT4G26920" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] INTERPRO:IPR002913 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161566 GO:GO:0003677 Pfam:PF01852
PROSITE:PS50848 HOGENOM:HOG000147055 IPI:IPI00519973 PIR:D85312
RefSeq:NP_194422.1 UniGene:At.54524 ProteinModelPortal:Q9M0J8
STRING:Q9M0J8 PaxDb:Q9M0J8 PRIDE:Q9M0J8 EnsemblPlants:AT4G26920.1
GeneID:828799 KEGG:ath:AT4G26920 TAIR:At4g26920 eggNOG:NOG311290
OMA:WIIADIS PhylomeDB:Q9M0J8 ArrayExpress:Q9M0J8
Genevestigator:Q9M0J8 Uniprot:Q9M0J8
Length = 461
Score = 147 (56.8 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 49/181 (27%), Positives = 87/181 (48%)
Query: 428 ITSPEGRKSMLKLAERMVTSFCTGVGASTAHAWTTLSATGSDDVRVMTRKSMDDPGRPPG 487
+T+ G+ ++L+ ++R+V FC+G + L A DVRV + +S D P G
Sbjct: 236 VTNSAGKNNLLQASKRLVHIFCSGTCGVIGNRGRWLGAGRRFDVRVSSLESRDMIRHPYG 295
Query: 488 IVLSAATSFWIPVPPRRIFDFLRDENSRSEWDIL--SNGGLVQEMAHIANGRDPGNCVSL 545
I+ SA+ I P +F + + L S L Q + + N VSL
Sbjct: 296 II-SASGLTKIHAKPEILFPLIYGVKKLEIHNHLRLSGNDLKQVLRITRDDITSRNDVSL 354
Query: 546 LRVNSANSSQSNMLVLQESCTDSTGSYVIYAPVDIVAMNMVLSGGDPDYVALLPSGFAIL 605
NS++ + +LQE+ +++ S VI++ +D+ ++ +++G D Y P GF I+
Sbjct: 355 FSFRLNNSTE--VFLLQEAYNEASSSMVIHSILDVSSLAKIING-DRSYSFTYPCGFTIM 411
Query: 606 P 606
P
Sbjct: 412 P 412
Score = 91 (37.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 28/101 (27%), Positives = 54/101 (53%)
Query: 269 QWSSVFCGIVSRAMTIEVLSTGVAGNYNGALQVMTAEF-QVPSPLVPTRENYFVRYCKQH 327
+W ++F +V ++IE + V ++ EF + +P++PTR+ +RYC +
Sbjct: 142 RWVTIFPSLVGN-VSIESSNDDVR-------MIIDMEFLTLITPVIPTRKVKVLRYCHRI 193
Query: 328 SDGTWAVVDVSL------DNLRPSPTSKCRRRPSGCLIQEL 362
++ TW + D+S+ D+LRP + R PSG +I+ +
Sbjct: 194 ANDTWIIADISMYLSSYSDDLRP----EFLRFPSGFIIKHV 230
>UNIPROTKB|H0YJ32 [details] [associations]
symbol:SHOX2 "Short stature homeobox protein 2"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 HGNC:HGNC:10854
EMBL:AC112502 Ensembl:ENST00000555977 Uniprot:H0YJ32
Length = 178
Score = 143 (55.4 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 36/114 (31%), Positives = 59/114 (51%)
Query: 18 RSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFF 77
RS E +L E E K E +A +D+ ++ +R+ T Q+ E+E F
Sbjct: 8 RSREPGSPRLTEVSPELKDRKE----DAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLF 63
Query: 78 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHER-HENQILKAENQ 130
E +PD R+ELS+ LGL +V+ WFQN+R + + Q + H+ ++ A +Q
Sbjct: 64 DETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKGVLIGAASQ 117
>UNIPROTKB|H0YLI9 [details] [associations]
symbol:SHOX "Short stature homeobox protein" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:BX004827
HGNC:HGNC:10853 ProteinModelPortal:H0YLI9 SMR:H0YLI9
Ensembl:ENST00000558872 Bgee:H0YLI9 Uniprot:H0YLI9
Length = 225
Score = 149 (57.5 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 38/121 (31%), Positives = 62/121 (51%)
Query: 11 HMFDMTRRSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRH-TQRQ 69
H+ + + E ++ E YE K E ++ E D+D K++R + T Q
Sbjct: 74 HVDNDKEKLKEFGTARVAEGIYECKEKREDVKSE-----DEDGQTKLKQRRSRTNFTLEQ 128
Query: 70 IQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQ-HERHENQILKAE 128
+ E+E F E +PD R+ELS+ LGL +V+ WFQN+R + + Q ++ H+ IL
Sbjct: 129 LNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTA 188
Query: 129 N 129
N
Sbjct: 189 N 189
>TAIR|locus:2202795 [details] [associations]
symbol:AtHB23 "homeobox protein 23" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009739 "response
to gibberellin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 GO:GO:0000976
KO:K09338 HOGENOM:HOG000006025 EMBL:AC005508 EMBL:BT009727
EMBL:AK228056 EMBL:AY084913 IPI:IPI00532646 PIR:F86396
RefSeq:NP_564268.1 UniGene:At.43561 ProteinModelPortal:Q8LFD3
SMR:Q8LFD3 STRING:Q8LFD3 PRIDE:Q8LFD3 EnsemblPlants:AT1G26960.1
GeneID:839587 KEGG:ath:AT1G26960 GeneFarm:3956 TAIR:At1g26960
eggNOG:NOG257807 InParanoid:Q8LFD3 OMA:LAFFPEN PhylomeDB:Q8LFD3
ProtClustDB:CLSN2917066 Genevestigator:Q8LFD3 GermOnline:AT1G26960
Uniprot:Q8LFD3
Length = 255
Score = 136 (52.9 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 42/140 (30%), Positives = 65/140 (46%)
Query: 2 FQPNTF--ESHHMFDMTRRSSESDL-GKL-KEDDYETKSGTETMEMEAPSGDDQDPSQHP 57
F P F ++HH + D G L K G ++M D S+
Sbjct: 10 FFPENFSLQNHHQEEEDHPQLLQDFHGFLGKRSPMNNVQGFCNLDMNGDEEYSDDGSKMG 69
Query: 58 KRKRYHRHTQRQIQEMEAFFKECPHPDDKQRK-ELSRELGLEPLQVKFWFQNKRTQMKAQ 116
++KR R Q++ +E F E + + RK EL+R LGL+P Q+ WFQN+R + K +
Sbjct: 70 EKKR--RLNMEQLKALEKDF-ELGNKLESDRKLELARALGLQPRQIAIWFQNRRARSKTK 126
Query: 117 HERHENQILKAENQKLRAEN 136
+ +LK + + LR EN
Sbjct: 127 QLEKDYDMLKRQFESLRDEN 146
Score = 52 (23.4 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 17/63 (26%), Positives = 28/63 (44%)
Query: 220 EMYGGC-DLIRSISG---PSEADKPMIV-ELAVAAMEEFLRMAQAGDPLWTDQNQWSSVF 274
E G C D +ISG P E D + +F + + + + ++N S++F
Sbjct: 177 ETEGSCSDRSENISGDIRPPEIDSQFALGHPPTTTTMQFFQNSSSEQRMVKEENSISNMF 236
Query: 275 CGI 277
CGI
Sbjct: 237 CGI 239
>UNIPROTKB|F1Q361 [details] [associations]
symbol:SHOX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 OMA:SNHCPVH
EMBL:AAEX03026084 Ensembl:ENSCAFT00000017459 Uniprot:F1Q361
Length = 291
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 40/121 (33%), Positives = 62/121 (51%)
Query: 7 FESHHMFDMTRRSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRH- 65
F+ H D + E G+ E YE K E ++ E D+D K++R +
Sbjct: 70 FKDHVDSDKDKLK-EFGTGRAAEGVYECKEKREDVKSE-----DEDGQTKLKQRRSRTNF 123
Query: 66 TQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQ-HERHENQI 124
T Q+ E+E F E +PD R+ELS+ LGL +V+ WFQN+R + + Q ++ H+ I
Sbjct: 124 TLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVI 183
Query: 125 L 125
L
Sbjct: 184 L 184
>UNIPROTKB|O15266 [details] [associations]
symbol:SHOX "Short stature homeobox protein" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0001501 "skeletal system development" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0006366 GO:GO:0001501 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
Orphanet:137693 eggNOG:NOG113578 HOVERGEN:HBG007233 KO:K09331
OrthoDB:EOG41C6X2 EMBL:Y11536 EMBL:Y11535 EMBL:U82668 EMBL:U89331
EMBL:BX004827 IPI:IPI00005744 IPI:IPI00411417 RefSeq:NP_000442.1
RefSeq:NP_006874.1 UniGene:Hs.105932 ProteinModelPortal:O15266
SMR:O15266 IntAct:O15266 STRING:O15266 PhosphoSite:O15266
PRIDE:O15266 DNASU:6473 Ensembl:ENST00000334060
Ensembl:ENST00000381575 Ensembl:ENST00000381578
Ensembl:ENST00000554971 GeneID:6473 KEGG:hsa:6473 UCSC:uc004cph.1
UCSC:uc004cpi.3 CTD:6473 GeneCards:GC0XP000585 HGNC:HGNC:10853
MIM:127300 MIM:249700 MIM:300582 MIM:312865 MIM:400020
neXtProt:NX_O15266 Orphanet:2632 Orphanet:240 PharmGKB:PA134978644
InParanoid:O15266 OMA:SNHCPVH PhylomeDB:O15266 GenomeRNAi:6473
NextBio:25145 Bgee:O15266 CleanEx:HS_SHOX Genevestigator:O15266
Uniprot:O15266
Length = 292
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 38/121 (31%), Positives = 62/121 (51%)
Query: 11 HMFDMTRRSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRH-TQRQ 69
H+ + + E ++ E YE K E ++ E D+D K++R + T Q
Sbjct: 74 HVDNDKEKLKEFGTARVAEGIYECKEKREDVKSE-----DEDGQTKLKQRRSRTNFTLEQ 128
Query: 70 IQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQ-HERHENQILKAE 128
+ E+E F E +PD R+ELS+ LGL +V+ WFQN+R + + Q ++ H+ IL
Sbjct: 129 LNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTA 188
Query: 129 N 129
N
Sbjct: 189 N 189
>UNIPROTKB|F1N4F7 [details] [associations]
symbol:LMX1B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035265 "organ growth" evidence=IEA]
[GO:0035108 "limb morphogenesis" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0021587 "cerebellum
morphogenesis" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0002930
"trabecular meshwork development" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0001764 GO:GO:0046872 GO:GO:0008283 GO:GO:0008219
GO:GO:0071542 GO:GO:0043565 GO:GO:0008270 GO:GO:0030199
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0030901 GO:GO:0035265
GO:GO:0009953 GO:GO:0021954 GO:GO:0035108
GeneTree:ENSGT00700000104050 GO:GO:0021587 OMA:NRMEGMM
EMBL:DAAA02032139 IPI:IPI00694069 Ensembl:ENSBTAT00000038767
Uniprot:F1N4F7
Length = 294
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 41/116 (35%), Positives = 61/116 (52%)
Query: 21 ESDLGKLKEDDYETKSGTETMEMEAPSGDD-QDPSQHPKRKRYHRHTQRQIQEMEAFFKE 79
ESD K +++D + K SGDD +DP + PKR R TQ++ + +A F+
Sbjct: 75 ESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDP-RRPKRPRTILTTQQR-RAFKASFEV 132
Query: 80 CPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKLRAE 135
P K R+ L+ E GL V+ WFQN+R +MK RH+ Q + +Q+L E
Sbjct: 133 SSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQRLGQE 188
>UNIPROTKB|F1RS26 [details] [associations]
symbol:LMX1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035265 "organ growth" evidence=IEA]
[GO:0035108 "limb morphogenesis" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0021587 "cerebellum
morphogenesis" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0002930
"trabecular meshwork development" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0001764 GO:GO:0046872 GO:GO:0008283 GO:GO:0008219
GO:GO:0071542 GO:GO:0043565 GO:GO:0008270 GO:GO:0030199
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0030901 GO:GO:0035265
GO:GO:0009953 GO:GO:0021954 GO:GO:0035108
GeneTree:ENSGT00700000104050 GO:GO:0021587 OMA:NRMEGMM
EMBL:CU062602 Ensembl:ENSSSCT00000006164 Uniprot:F1RS26
Length = 294
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 41/116 (35%), Positives = 61/116 (52%)
Query: 21 ESDLGKLKEDDYETKSGTETMEMEAPSGDD-QDPSQHPKRKRYHRHTQRQIQEMEAFFKE 79
ESD K +++D + K SGDD +DP + PKR R TQ++ + +A F+
Sbjct: 75 ESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDP-RRPKRPRTILTTQQR-RAFKASFEV 132
Query: 80 CPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKLRAE 135
P K R+ L+ E GL V+ WFQN+R +MK RH+ Q + +Q+L E
Sbjct: 133 SSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQRLGQE 188
>UNIPROTKB|H0YMR3 [details] [associations]
symbol:SHOX "Short stature homeobox protein" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:BX004827
HGNC:HGNC:10853 ProteinModelPortal:H0YMR3 SMR:H0YMR3
Ensembl:ENST00000560001 Bgee:H0YMR3 Uniprot:H0YMR3
Length = 279
Score = 149 (57.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 38/121 (31%), Positives = 62/121 (51%)
Query: 11 HMFDMTRRSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRH-TQRQ 69
H+ + + E ++ E YE K E ++ E D+D K++R + T Q
Sbjct: 74 HVDNDKEKLKEFGTARVAEGIYECKEKREDVKSE-----DEDGQTKLKQRRSRTNFTLEQ 128
Query: 70 IQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQ-HERHENQILKAE 128
+ E+E F E +PD R+ELS+ LGL +V+ WFQN+R + + Q ++ H+ IL
Sbjct: 129 LNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTA 188
Query: 129 N 129
N
Sbjct: 189 N 189
Score = 39 (18.8 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 295 YNGALQVMTAEFQVPSPLVPTRENYFVRYCKQ 326
+ G LQ+ T P P V T + + YC+Q
Sbjct: 225 FQGLLQMKTNHTPFPKPTVFTFLS--LCYCRQ 254
>RGD|2320224 [details] [associations]
symbol:LOC100364841 "rCG53272-like" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:2320224 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00530000063899
IPI:IPI00959398 Ensembl:ENSRNOT00000035489 Uniprot:F1M524
Length = 96
Score = 130 (50.8 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 27/70 (38%), Positives = 41/70 (58%)
Query: 58 KRKRYHRH--------TQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNK 109
+R+R+ RH TQ Q++EME F+E P+PD R EL+R L + ++VK WF N+
Sbjct: 4 RRRRHRRHRRSSPYLFTQWQVEEMENLFEETPYPDVLTRGELARTLNVPEVKVKVWFSNR 63
Query: 110 RTQMKAQHER 119
R + + R
Sbjct: 64 RAKQRKNERR 73
>UNIPROTKB|J9NU69 [details] [associations]
symbol:LMX1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 OMA:NRMEGMM EMBL:AAEX03006872
EMBL:AAEX03006873 Ensembl:ENSCAFT00000044276 Uniprot:J9NU69
Length = 327
Score = 149 (57.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 41/116 (35%), Positives = 61/116 (52%)
Query: 21 ESDLGKLKEDDYETKSGTETMEMEAPSGDD-QDPSQHPKRKRYHRHTQRQIQEMEAFFKE 79
ESD K +++D + K SGDD +DP + PKR R TQ++ + +A F+
Sbjct: 115 ESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDP-RRPKRPRTILTTQQR-RAFKASFEV 172
Query: 80 CPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKLRAE 135
P K R+ L+ E GL V+ WFQN+R +MK RH+ Q + +Q+L E
Sbjct: 173 SSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQRLGQE 228
>MGI|MGI:1100513 [details] [associations]
symbol:Lmx1b "LIM homeobox transcription factor 1 beta"
species:10090 "Mus musculus" [GO:0001764 "neuron migration"
evidence=IMP] [GO:0002930 "trabecular meshwork development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008219 "cell death" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0021587 "cerebellum morphogenesis"
evidence=IMP] [GO:0021954 "central nervous system neuron
development" evidence=IMP] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0030199 "collagen fibril organization"
evidence=IMP] [GO:0030326 "embryonic limb morphogenesis"
evidence=NAS] [GO:0030901 "midbrain development" evidence=IMP]
[GO:0035108 "limb morphogenesis" evidence=IMP] [GO:0035265 "organ
growth" evidence=IMP] [GO:0043010 "camera-type eye development"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IMP] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 EMBL:AF078166
MGI:MGI:1100513 GO:GO:0005634 GO:GO:0001764 GO:GO:0046872
GO:GO:0008283 GO:GO:0008219 GO:GO:0071542 GO:GO:0043565
GO:GO:0008270 GO:GO:0030199 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0030326 GO:GO:0030901 GO:GO:0035265 EMBL:CH466542
GO:GO:0009953 GO:GO:0021954 GeneTree:ENSGT00700000104050
GO:GO:0021587 HOGENOM:HOG000231629 eggNOG:NOG243427
HOVERGEN:HBG052335 KO:K09371 OrthoDB:EOG4QFWDN CTD:4010
EMBL:AL929212 EMBL:BC119169 EMBL:BC125469 IPI:IPI00132794
RefSeq:NP_034855.2 UniGene:Mm.39825 ProteinModelPortal:O88609
SMR:O88609 STRING:O88609 PhosphoSite:O88609 PRIDE:O88609
Ensembl:ENSMUST00000041730 GeneID:16917 KEGG:mmu:16917
InParanoid:Q0VEN6 OMA:NRMEGMM NextBio:290964 Bgee:O88609
CleanEx:MM_LMX1B Genevestigator:O88609
GermOnline:ENSMUSG00000038765 GO:GO:0002930 Uniprot:O88609
Length = 372
Score = 149 (57.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 41/116 (35%), Positives = 61/116 (52%)
Query: 21 ESDLGKLKEDDYETKSGTETMEMEAPSGDD-QDPSQHPKRKRYHRHTQRQIQEMEAFFKE 79
ESD K +++D + K SGDD +DP + PKR R TQ++ + +A F+
Sbjct: 160 ESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDP-RRPKRPRTILTTQQR-RAFKASFEV 217
Query: 80 CPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKLRAE 135
P K R+ L+ E GL V+ WFQN+R +MK RH+ Q + +Q+L E
Sbjct: 218 SSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQRLGQE 273
>UNIPROTKB|G3V877 [details] [associations]
symbol:Lmx1b "LIM homeobox transcription factor 1 beta"
species:10116 "Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0002930 "trabecular meshwork development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0021587 "cerebellum morphogenesis" evidence=IEA]
[GO:0021954 "central nervous system neuron development"
evidence=IEA] [GO:0030199 "collagen fibril organization"
evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
[GO:0035108 "limb morphogenesis" evidence=IEA] [GO:0035265 "organ
growth" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
RGD:620843 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:CH474001 OMA:NRMEGMM
UniGene:Rn.92364 Ensembl:ENSRNOT00000022953 Uniprot:G3V877
Length = 372
Score = 149 (57.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 41/116 (35%), Positives = 61/116 (52%)
Query: 21 ESDLGKLKEDDYETKSGTETMEMEAPSGDD-QDPSQHPKRKRYHRHTQRQIQEMEAFFKE 79
ESD K +++D + K SGDD +DP + PKR R TQ++ + +A F+
Sbjct: 160 ESDSVKSEDEDGDMKPAKGQGSQNKGSGDDGKDP-RRPKRPRTILTTQQR-RAFKASFEV 217
Query: 80 CPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKLRAE 135
P K R+ L+ E GL V+ WFQN+R +MK RH+ Q + +Q+L E
Sbjct: 218 SSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQRLGQE 273
>UNIPROTKB|O60663 [details] [associations]
symbol:LMX1B "LIM homeobox transcription factor 1-beta"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0001701 "in utero embryonic development" evidence=NAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030182 "neuron differentiation" evidence=ISS] [GO:0007275
"multicellular organismal development" evidence=NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=ISS]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0030182 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 EMBL:CH471090 GO:GO:0001701
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0009953 HOGENOM:HOG000231629
eggNOG:NOG243427 HOVERGEN:HBG052335 KO:K09371 OrthoDB:EOG4QFWDN
CTD:4010 EMBL:AF057135 EMBL:AF059575 EMBL:AF059572 EMBL:AF059573
EMBL:AF059574 EMBL:AL161908 EMBL:AL161731 EMBL:BC069601
EMBL:BC112120 EMBL:BC113491 IPI:IPI00030989 IPI:IPI00220363
RefSeq:NP_001167618.1 RefSeq:NP_002307.2 UniGene:Hs.129133
ProteinModelPortal:O60663 SMR:O60663 IntAct:O60663 STRING:O60663
PhosphoSite:O60663 PaxDb:O60663 PRIDE:O60663 DNASU:4010
Ensembl:ENST00000373474 Ensembl:ENST00000425646 GeneID:4010
KEGG:hsa:4010 UCSC:uc004bqj.3 GeneCards:GC09P129376 HGNC:HGNC:6654
MIM:161200 MIM:602575 neXtProt:NX_O60663 Orphanet:2614
PharmGKB:PA30417 InParanoid:O60663 PhylomeDB:O60663 GenomeRNAi:4010
NextBio:15732 ArrayExpress:O60663 Bgee:O60663 CleanEx:HS_LMX1B
Genevestigator:O60663 GermOnline:ENSG00000136944 Uniprot:O60663
Length = 379
Score = 149 (57.5 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 41/116 (35%), Positives = 61/116 (52%)
Query: 21 ESDLGKLKEDDYETKSGTETMEMEAPSGDD-QDPSQHPKRKRYHRHTQRQIQEMEAFFKE 79
ESD K +++D + K SGDD +DP + PKR R TQ++ + +A F+
Sbjct: 160 ESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDP-RRPKRPRTILTTQQR-RAFKASFEV 217
Query: 80 CPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKLRAE 135
P K R+ L+ E GL V+ WFQN+R +MK RH+ Q + +Q+L E
Sbjct: 218 SSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQRLGQE 273
>ZFIN|ZDB-GENE-030131-4340 [details] [associations]
symbol:nkx2.9 "NK2 transcription factor related,
locus 9 (Drosophila)" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0021514 "ventral spinal cord interneuron
differentiation" evidence=IGI;IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-030131-4340
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0021514
HOGENOM:HOG000231923 HOVERGEN:HBG006689 eggNOG:NOG243784
OrthoDB:EOG466VN6 EMBL:DQ924560 IPI:IPI00617799 UniGene:Dr.79439
STRING:Q06AD2 InParanoid:Q06AD2 Uniprot:Q06AD2
Length = 164
Score = 128 (50.1 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 31/96 (32%), Positives = 53/96 (55%)
Query: 20 SESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYH-RHTQRQIQEMEAFFK 78
+E+D G + DD ++ ++ E + S D ++H KRK+ ++ Q E+E F+
Sbjct: 43 TENDRGHISSDDSNIEASPDSTEPDVLSVD----TEHEKRKKRRVLFSKAQTYELERRFR 98
Query: 79 ECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 114
+ + +R++L+ L L P QVK WFQN R +MK
Sbjct: 99 QQRYLSAPEREQLAHLLRLTPTQVKIWFQNHRYKMK 134
>RGD|3674 [details] [associations]
symbol:Shox2 "short stature homeobox 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA;ISO] [GO:0002053 "positive regulation of mesenchymal
cell proliferation" evidence=IEA;ISO] [GO:0002062 "chondrocyte
differentiation" evidence=ISO] [GO:0002063 "chondrocyte development"
evidence=IEA;ISO] [GO:0003170 "heart valve development"
evidence=IEA;ISO] [GO:0003209 "cardiac atrium morphogenesis"
evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA;ISO] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA;ISO] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=ISO] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA;ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IEA;ISO] [GO:0048598 "embryonic
morphogenesis" evidence=ISO] [GO:0048743 "positive regulation of
skeletal muscle fiber development" evidence=IEA;ISO] [GO:0050772
"positive regulation of axonogenesis" evidence=IEA;ISO] [GO:0060272
"embryonic skeletal joint morphogenesis" evidence=IEA;ISO]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=IEA;ISO] [GO:0060415 "muscle tissue
morphogenesis" evidence=IEA;ISO] [GO:2000172 "regulation of branching
morphogenesis of a nerve" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:3674
GO:GO:0005634 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030326 GO:GO:0050772
GO:GO:0032330 GO:GO:0001649 HOGENOM:HOG000231518 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976 GO:GO:0060272
GO:GO:0002053 GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 CTD:6474
eggNOG:NOG113578 HOVERGEN:HBG007233 KO:K09331 OrthoDB:EOG41C6X2
GO:GO:0003170 EMBL:AJ002258 EMBL:AJ002259 EMBL:AJ002260
IPI:IPI00231489 IPI:IPI00559825 RefSeq:NP_037160.1 UniGene:Rn.11258
ProteinModelPortal:O35750 SMR:O35750 STRING:O35750 GeneID:25546
KEGG:rno:25546 UCSC:RGD:3674 InParanoid:O35750 NextBio:607081
Genevestigator:O35750 GermOnline:ENSRNOG00000012478 Uniprot:O35750
Length = 237
Score = 143 (55.4 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 36/114 (31%), Positives = 59/114 (51%)
Query: 18 RSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFF 77
RS E +L E E K E +A +D+ ++ +R+ T Q+ E+E F
Sbjct: 10 RSREPGSPRLTEVSPELKDRKE----DAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLF 65
Query: 78 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHER-HENQILKAENQ 130
E +PD R+ELS+ LGL +V+ WFQN+R + + Q + H+ ++ A +Q
Sbjct: 66 DETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKGVLIGAASQ 119
>UNIPROTKB|O35750 [details] [associations]
symbol:Shox2 "Short stature homeobox protein 2"
species:10116 "Rattus norvegicus" [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:3674 GO:GO:0005634 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0030326 GO:GO:0050772 GO:GO:0032330 GO:GO:0001649
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0000976 GO:GO:0060272 GO:GO:0002053
GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 CTD:6474
eggNOG:NOG113578 HOVERGEN:HBG007233 KO:K09331 OrthoDB:EOG41C6X2
GO:GO:0003170 EMBL:AJ002258 EMBL:AJ002259 EMBL:AJ002260
IPI:IPI00231489 IPI:IPI00559825 RefSeq:NP_037160.1 UniGene:Rn.11258
ProteinModelPortal:O35750 SMR:O35750 STRING:O35750 GeneID:25546
KEGG:rno:25546 UCSC:RGD:3674 InParanoid:O35750 NextBio:607081
Genevestigator:O35750 GermOnline:ENSRNOG00000012478 Uniprot:O35750
Length = 237
Score = 143 (55.4 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 36/114 (31%), Positives = 59/114 (51%)
Query: 18 RSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFF 77
RS E +L E E K E +A +D+ ++ +R+ T Q+ E+E F
Sbjct: 10 RSREPGSPRLTEVSPELKDRKE----DAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLF 65
Query: 78 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHER-HENQILKAENQ 130
E +PD R+ELS+ LGL +V+ WFQN+R + + Q + H+ ++ A +Q
Sbjct: 66 DETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKGVLIGAASQ 119
>UNIPROTKB|F8VYP0 [details] [associations]
symbol:LMX1B "LIM homeobox transcription factor 1-beta"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 KO:K09371 CTD:4010 EMBL:AL161908 EMBL:AL161731
IPI:IPI00220363 RefSeq:NP_002307.2 UniGene:Hs.129133 DNASU:4010
GeneID:4010 KEGG:hsa:4010 HGNC:HGNC:6654 GenomeRNAi:4010
NextBio:15732 ProteinModelPortal:F8VYP0 SMR:F8VYP0 PRIDE:F8VYP0
Ensembl:ENST00000526117 UCSC:uc004bqi.3 ArrayExpress:F8VYP0
Bgee:F8VYP0 Uniprot:F8VYP0
Length = 395
Score = 149 (57.5 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 41/116 (35%), Positives = 61/116 (52%)
Query: 21 ESDLGKLKEDDYETKSGTETMEMEAPSGDD-QDPSQHPKRKRYHRHTQRQIQEMEAFFKE 79
ESD K +++D + K SGDD +DP + PKR R TQ++ + +A F+
Sbjct: 183 ESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDP-RRPKRPRTILTTQQR-RAFKASFEV 240
Query: 80 CPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKLRAE 135
P K R+ L+ E GL V+ WFQN+R +MK RH+ Q + +Q+L E
Sbjct: 241 SSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQRLGQE 296
>UNIPROTKB|F1NFE6 [details] [associations]
symbol:SHOX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001649 "osteoblast
differentiation" evidence=IEA] [GO:0002053 "positive regulation of
mesenchymal cell proliferation" evidence=IEA] [GO:0002063
"chondrocyte development" evidence=IEA] [GO:0003170 "heart valve
development" evidence=IEA] [GO:0003209 "cardiac atrium
morphogenesis" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IEA] [GO:0048743 "positive regulation of skeletal muscle
fiber development" evidence=IEA] [GO:0050772 "positive regulation
of axonogenesis" evidence=IEA] [GO:0060272 "embryonic skeletal
joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060415 "muscle tissue morphogenesis"
evidence=IEA] [GO:2000172 "regulation of branching morphogenesis of
a nerve" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0032330
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104279 GO:GO:0002053 GO:GO:0048743
GO:GO:0045880 GO:GO:2000172 EMBL:AADN02017635 EMBL:AADN02017636
EMBL:AADN02017637 EMBL:AADN02017638 IPI:IPI00577004
Ensembl:ENSGALT00000026949 OMA:ARVQXVQ Uniprot:F1NFE6
Length = 221
Score = 141 (54.7 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 40/122 (32%), Positives = 62/122 (50%)
Query: 7 FESHHMFDMTRRSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRH- 65
F+ H D + E G+ E YE K E ++ E D+D K++R +
Sbjct: 5 FKDHVESDKDKMK-EFAAGRTAEGIYECKEKREDVKSE-----DEDGQTKLKQRRSRTNF 58
Query: 66 TQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVK-FWFQNKRTQMKAQ-HERHENQ 123
T Q+ E+E F E +PD R+ELS+ LGL +V+ WFQN+R + + Q ++ H+
Sbjct: 59 TLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQQVWFQNRRAKCRKQENQMHKGV 118
Query: 124 IL 125
IL
Sbjct: 119 IL 120
>UNIPROTKB|F1NR49 [details] [associations]
symbol:NKX2-6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104098 EMBL:AADN02055465 IPI:IPI01017154
Ensembl:ENSGALT00000040979 Uniprot:F1NR49
Length = 156
Score = 113 (44.8 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 52 DPSQHPKR--KRYHR--HTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQ 107
DP HPK+ +R R +Q Q+ E+E FK+ + +R+ L+ L L QVK WFQ
Sbjct: 17 DPCHHPKQPQRRKPRVLFSQTQVLELERRFKQQKYLSALEREHLANVLQLTSTQVKIWFQ 76
Query: 108 NKRTQMKAQHE 118
N+R + K Q +
Sbjct: 77 NRRYKCKRQRQ 87
Score = 42 (19.8 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 12/36 (33%), Positives = 15/36 (41%)
Query: 190 GKPL--SSFPHLTPRSLDLGFTNLGTQSGFVGEMYG 223
GKP S PHL P + + + T G YG
Sbjct: 112 GKPCFEGSQPHLAPYGITVSPYSYSTYYSAYGVSYG 147
>UNIPROTKB|K7GS77 [details] [associations]
symbol:LOC100520816 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
EMBL:FP015869 GeneID:100520816 RefSeq:XP_003134962.1
Ensembl:ENSSSCT00000035048 Uniprot:K7GS77
Length = 292
Score = 145 (56.1 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 37/117 (31%), Positives = 61/117 (52%)
Query: 11 HMFDMTRRSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRH-TQRQ 69
H+ + + E G+ E Y+ K E ++ E D+D K++R + T Q
Sbjct: 74 HVDNDKDKLKEFGTGRAAEGIYDCKDKREDVKSE-----DEDGQTKLKQRRSRTNFTLEQ 128
Query: 70 IQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQ-HERHENQIL 125
+ E+E F E +PD R+ELS+ LGL +V+ WFQN+R + + Q ++ H+ IL
Sbjct: 129 LNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVIL 185
>UNIPROTKB|F1SG33 [details] [associations]
symbol:LOC100520816 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 KO:K09331 OMA:SNHCPVH
EMBL:FP015869 RefSeq:XP_003134961.1 Ensembl:ENSSSCT00000013224
GeneID:100520816 KEGG:ssc:100520816 Uniprot:F1SG33
Length = 300
Score = 145 (56.1 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 37/117 (31%), Positives = 61/117 (52%)
Query: 11 HMFDMTRRSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRH-TQRQ 69
H+ + + E G+ E Y+ K E ++ E D+D K++R + T Q
Sbjct: 74 HVDNDKDKLKEFGTGRAAEGIYDCKDKREDVKSE-----DEDGQTKLKQRRSRTNFTLEQ 128
Query: 70 IQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQ-HERHENQIL 125
+ E+E F E +PD R+ELS+ LGL +V+ WFQN+R + + Q ++ H+ IL
Sbjct: 129 LNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVIL 185
>UNIPROTKB|B7ZLH2 [details] [associations]
symbol:LMX1B "LMX1B protein" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0002930 "trabecular meshwork development" evidence=IEA]
[GO:0008219 "cell death" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0021587 "cerebellum morphogenesis"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0030901 "midbrain development"
evidence=IEA] [GO:0035108 "limb morphogenesis" evidence=IEA]
[GO:0035265 "organ growth" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0001764 GO:GO:0046872 GO:GO:0008283
GO:GO:0008219 GO:GO:0071542 GO:GO:0043565 GO:GO:0008270
GO:GO:0030199 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0030901
GO:GO:0035265 GO:GO:0009953 GO:GO:0021954 GO:GO:0035108
GO:GO:0021587 HOGENOM:HOG000231629 HOVERGEN:HBG052335 KO:K09371
CTD:4010 EMBL:AL161908 EMBL:AL161731 UniGene:Hs.129133 DNASU:4010
GeneID:4010 KEGG:hsa:4010 HGNC:HGNC:6654 PharmGKB:PA30417
GenomeRNAi:4010 NextBio:15732 EMBL:BC143801 IPI:IPI00956472
RefSeq:NP_001167617.1 SMR:B7ZLH2 STRING:B7ZLH2
Ensembl:ENST00000561065 Uniprot:B7ZLH2
Length = 383
Score = 147 (56.8 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 40/113 (35%), Positives = 60/113 (53%)
Query: 21 ESDLGKLKEDDYETKSGTETMEMEAPSGDD-QDPSQHPKRKRYHRHTQRQIQEMEAFFKE 79
ESD K +++D + K SGDD +DP + PKR R TQ++ + +A F+
Sbjct: 160 ESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDP-RRPKRPRTILTTQQR-RAFKASFEV 217
Query: 80 CPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKL 132
P K R+ L+ E GL V+ WFQN+R +MK RH+ Q + +Q+L
Sbjct: 218 SSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQRL 270
>UNIPROTKB|A6NLG4 [details] [associations]
symbol:SHOX2 "cDNA FLJ38019 fis, clone CTONG2012758, highly
similar to Short stature homeobox protein 2" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CH471052
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0000976 UniGene:Hs.55967 HGNC:HGNC:10854
HOVERGEN:HBG007233 NextBio:25151 EMBL:AC112502 EMBL:AK095338
IPI:IPI01024865 SMR:A6NLG4 STRING:A6NLG4 Ensembl:ENST00000441443
Ensembl:ENST00000490689 Uniprot:A6NLG4
Length = 190
Score = 134 (52.2 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 27/83 (32%), Positives = 48/83 (57%)
Query: 49 DDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQN 108
+D+ ++ +R+ T Q+ E+E F E +PD R+ELS+ LGL +V+ WFQN
Sbjct: 2 EDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQN 61
Query: 109 KRTQMKAQHER-HENQILKAENQ 130
+R + + Q + H+ ++ A +Q
Sbjct: 62 RRAKCRKQENQLHKGVLIGAASQ 84
>UNIPROTKB|Q8UVR3 [details] [associations]
symbol:lmx1b.1 "LIM homeobox transcription factor 1-beta.1"
species:8355 "Xenopus laevis" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0039020 "pronephric nephron tubule development"
evidence=IMP] [GO:0072013 "glomus development" evidence=IEP;IMP]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0030182 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0072013
GO:GO:0039020 HOVERGEN:HBG052335 KO:K09371 EMBL:AF414086
RefSeq:NP_001083902.1 UniGene:Xl.12464 HSSP:P50480
ProteinModelPortal:Q8UVR3 GeneID:399182 KEGG:xla:399182 CTD:399182
Xenbase:XB-GENE-494754 Uniprot:Q8UVR3
Length = 400
Score = 147 (56.8 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 41/124 (33%), Positives = 61/124 (49%)
Query: 14 DMTRRSSESDLGKLKEDDYE--TKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQ 71
D+ S D +K DD E K G + S D +DP + PKR R TQ++ +
Sbjct: 174 DLLSSGSPDDSDSVKSDDEEGDVKPGKGRVNQGKGSDDGKDP-RRPKRPRTILTTQQR-R 231
Query: 72 EMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQK 131
+A F+ P K R+ L+ E GL V+ WFQN+R ++K RH+ Q + +Q+
Sbjct: 232 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKIKKLARRHQQQQEQQNSQR 291
Query: 132 LRAE 135
L E
Sbjct: 292 LGQE 295
>UNIPROTKB|F8W7W6 [details] [associations]
symbol:LMX1B "LIM homeobox transcription factor 1-beta"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0002930 "trabecular meshwork development" evidence=IEA]
[GO:0008219 "cell death" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0021587 "cerebellum morphogenesis"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0030901 "midbrain development"
evidence=IEA] [GO:0035108 "limb morphogenesis" evidence=IEA]
[GO:0035265 "organ growth" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0001764 GO:GO:0046872 GO:GO:0008283
GO:GO:0008219 GO:GO:0071542 GO:GO:0043565 GO:GO:0008270
GO:GO:0030199 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0030901
GO:GO:0035265 GO:GO:0009953 GO:GO:0021954 GO:GO:0035108
GO:GO:0021587 KO:K09371 CTD:4010 EMBL:AL161908 EMBL:AL161731
UniGene:Hs.129133 DNASU:4010 GeneID:4010 KEGG:hsa:4010
HGNC:HGNC:6654 GenomeRNAi:4010 NextBio:15732 OMA:NRMEGMM
IPI:IPI00956472 RefSeq:NP_001167617.1 ProteinModelPortal:F8W7W6
SMR:F8W7W6 Ensembl:ENST00000355497 UCSC:uc011maa.2
ArrayExpress:F8W7W6 Bgee:F8W7W6 Uniprot:F8W7W6
Length = 406
Score = 147 (56.8 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 40/113 (35%), Positives = 60/113 (53%)
Query: 21 ESDLGKLKEDDYETKSGTETMEMEAPSGDD-QDPSQHPKRKRYHRHTQRQIQEMEAFFKE 79
ESD K +++D + K SGDD +DP + PKR R TQ++ + +A F+
Sbjct: 183 ESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDP-RRPKRPRTILTTQQR-RAFKASFEV 240
Query: 80 CPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKL 132
P K R+ L+ E GL V+ WFQN+R +MK RH+ Q + +Q+L
Sbjct: 241 SSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQRL 293
>ZFIN|ZDB-GENE-040426-1457 [details] [associations]
symbol:shox2 "short stature homeobox 2"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007507 "heart
development" evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-040426-1457 GO:GO:0005634 GO:GO:0007507 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GeneTree:ENSGT00700000104279 HSSP:P06601 CTD:6474 eggNOG:NOG113578
HOVERGEN:HBG007233 KO:K09331 OrthoDB:EOG41C6X2 EMBL:BX004974
EMBL:BC056324 EMBL:BC065345 IPI:IPI00491363 RefSeq:NP_957490.1
UniGene:Dr.26980 SMR:Q7SZN8 Ensembl:ENSDART00000009564
GeneID:394171 KEGG:dre:394171 InParanoid:Q7SZN8 NextBio:20815116
Uniprot:Q7SZN8
Length = 299
Score = 144 (55.7 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 36/116 (31%), Positives = 60/116 (51%)
Query: 16 TRRSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEA 75
+ RS +S KL + + + K E + P D+ +R R + T Q+ E+E
Sbjct: 70 SERSRDSSSPKLTDGNTDMKERKEDCK---PLEDETQTKIKQRRSRTN-FTLEQLNELER 125
Query: 76 FFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHER-HENQILKAENQ 130
F E +PD R+ELS+ LGL +V+ WFQN+R + + Q + H+ ++ A +Q
Sbjct: 126 LFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKGVLIGAASQ 181
>UNIPROTKB|D6RBG8 [details] [associations]
symbol:PITX2 "Pituitary homeobox 2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231518 EMBL:AC017068 HGNC:HGNC:9005 ChiTaRS:PITX2
IPI:IPI00967695 ProteinModelPortal:D6RBG8 SMR:D6RBG8
Ensembl:ENST00000511990 ArrayExpress:D6RBG8 Bgee:D6RBG8
Uniprot:D6RBG8
Length = 118
Score = 125 (49.1 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 23/77 (29%), Positives = 46/77 (59%)
Query: 51 QDPSQHPKRKRYHRH-TQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNK 109
+DPS+ +++R H T +Q+QE+EA F+ +PD R+E++ L +V+ WF+N+
Sbjct: 31 EDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNR 90
Query: 110 RTQMKAQHERHENQILK 126
R + + + + ++ K
Sbjct: 91 RAKWRKRERNQQAELCK 107
>WB|WBGene00006778 [details] [associations]
symbol:unc-42 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0040011 "locomotion" evidence=IMP] [GO:0030163 "protein
catabolic process" evidence=IMP] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0048665 "neuron fate specification" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0040011
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030163
GO:GO:0048665 GeneTree:ENSGT00700000104273 EMBL:Z70754 EMBL:Z70780
PIR:T22296 RefSeq:NP_505519.3 ProteinModelPortal:G5EBS8 SMR:G5EBS8
IntAct:G5EBS8 EnsemblMetazoa:F58E6.10 GeneID:192081
KEGG:cel:CELE_F58E6.10 CTD:192081 WormBase:F58E6.10 OMA:AAFQKSH
NextBio:951506 Uniprot:G5EBS8
Length = 264
Score = 141 (54.7 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 32/75 (42%), Positives = 48/75 (64%)
Query: 57 PKRKRYHR--HTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 114
P R+R HR TQ Q+QE++A F++ +PD R+EL+R L +++ WFQN+R
Sbjct: 83 PARRR-HRTTFTQEQLQELDAAFQKSHYPDIYVREELARITKLNEARIQVWFQNRR---- 137
Query: 115 AQHERHENQILKAEN 129
A+H +HE Q+ KA N
Sbjct: 138 AKHRKHEKQLNKAIN 152
>UNIPROTKB|F1PF43 [details] [associations]
symbol:VAX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0009950 "dorsal/ventral axis specification"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0030900 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0060041
GO:GO:0007409 GO:GO:0048048 GO:GO:0000976 GO:GO:0031490
GO:GO:0009950 GeneTree:ENSGT00680000099870 OMA:LGEADHC
EMBL:AAEX03007653 EMBL:AAEX03007652 Ensembl:ENSCAFT00000005524
Uniprot:F1PF43
Length = 247
Score = 140 (54.3 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 40/118 (33%), Positives = 56/118 (47%)
Query: 42 EMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 101
E+ P G D D PKR R T Q+ +E F+ C + ++R EL+R+L L Q
Sbjct: 47 EIVLPKGLDLD---RPKRTRTS-FTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQ 102
Query: 102 VKFWFQNKRTQMKAQHERHENQILKAENQKLRAENN--RYKEALGNATCPNCGGPAAL 157
VK WFQN+RT+ K R + +E + A +N R E + P G AL
Sbjct: 103 VKVWFQNRRTKQKKDQSRDLEKRTSSEASEAFATSNILRLLEQGRLLSVPRAPGLVAL 160
>UNIPROTKB|F6Y4K5 [details] [associations]
symbol:SHOX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 CTD:6474 KO:K09331
OMA:CTEAGRD EMBL:AAEX03013721 Ensembl:ENSCAFT00000014128
RefSeq:XP_003639881.1 GeneID:485732 KEGG:cfa:485732 Uniprot:F6Y4K5
Length = 319
Score = 143 (55.4 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 36/114 (31%), Positives = 59/114 (51%)
Query: 18 RSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFF 77
RS E +L E E K E +A +D+ ++ +R+ T Q+ E+E F
Sbjct: 104 RSREPGSPRLTEVSPELKERKE----DAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLF 159
Query: 78 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHER-HENQILKAENQ 130
E +PD R+ELS+ LGL +V+ WFQN+R + + Q + H+ ++ A +Q
Sbjct: 160 DETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKGVLIGAASQ 213
>UNIPROTKB|I3L828 [details] [associations]
symbol:SHOX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:2000172 "regulation
of branching morphogenesis of a nerve" evidence=IEA] [GO:0060415
"muscle tissue morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0050772 "positive regulation of axonogenesis"
evidence=IEA] [GO:0048743 "positive regulation of skeletal muscle
fiber development" evidence=IEA] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0003209 "cardiac atrium
morphogenesis" evidence=IEA] [GO:0003170 "heart valve development"
evidence=IEA] [GO:0002063 "chondrocyte development" evidence=IEA]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030326
GO:GO:0050772 GO:GO:0032330 GO:GO:0001649 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GeneTree:ENSGT00700000104279 GO:GO:0060272 GO:GO:0002053
GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 CTD:6474
KO:K09331 OMA:CTEAGRD GO:GO:0003170 EMBL:FP312663
RefSeq:NP_001230281.1 UniGene:Ssc.38718 Ensembl:ENSSSCT00000025053
GeneID:100628206 KEGG:ssc:100628206 Uniprot:I3L828
Length = 321
Score = 143 (55.4 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 36/114 (31%), Positives = 59/114 (51%)
Query: 18 RSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFF 77
RS E +L E E K E +A +D+ ++ +R+ T Q+ E+E F
Sbjct: 106 RSREPGSPRLTEVSPELKDRKE----DAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLF 161
Query: 78 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHER-HENQILKAENQ 130
E +PD R+ELS+ LGL +V+ WFQN+R + + Q + H+ ++ A +Q
Sbjct: 162 DETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKGVLIGAASQ 215
>UNIPROTKB|E1BLB9 [details] [associations]
symbol:E1BLB9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:2000172 "regulation
of branching morphogenesis of a nerve" evidence=IEA] [GO:0060415
"muscle tissue morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0050772 "positive regulation of axonogenesis"
evidence=IEA] [GO:0048743 "positive regulation of skeletal muscle
fiber development" evidence=IEA] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0003209 "cardiac atrium
morphogenesis" evidence=IEA] [GO:0003170 "heart valve development"
evidence=IEA] [GO:0002063 "chondrocyte development" evidence=IEA]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030326
GO:GO:0050772 GO:GO:0032330 GO:GO:0001649 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GeneTree:ENSGT00700000104279 GO:GO:0060272 GO:GO:0002053
GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 OMA:CTEAGRD
GO:GO:0003170 EMBL:DAAA02002472 IPI:IPI00838807 UniGene:Bt.59425
Ensembl:ENSBTAT00000044731 NextBio:20874258 Uniprot:E1BLB9
Length = 331
Score = 143 (55.4 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 36/114 (31%), Positives = 59/114 (51%)
Query: 18 RSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFF 77
RS E +L E E K E +A +D+ ++ +R+ T Q+ E+E F
Sbjct: 104 RSREPGSPRLTEVSPELKDRKE----DAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLF 159
Query: 78 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHER-HENQILKAENQ 130
E +PD R+ELS+ LGL +V+ WFQN+R + + Q + H+ ++ A +Q
Sbjct: 160 DETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKGVLIGAASQ 213
>UNIPROTKB|O60902 [details] [associations]
symbol:SHOX2 "Short stature homeobox protein 2"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001649
"osteoblast differentiation" evidence=IEA] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=IEA]
[GO:0002063 "chondrocyte development" evidence=IEA] [GO:0003170
"heart valve development" evidence=IEA] [GO:0003209 "cardiac atrium
morphogenesis" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IEA] [GO:0048743 "positive regulation of skeletal muscle
fiber development" evidence=IEA] [GO:0050772 "positive regulation
of axonogenesis" evidence=IEA] [GO:0060272 "embryonic skeletal
joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060415 "muscle tissue morphogenesis"
evidence=IEA] [GO:2000172 "regulation of branching morphogenesis of
a nerve" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=TAS] [GO:0007399
"nervous system development" evidence=TAS] [GO:0007507 "heart
development" evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0007399 GO:GO:0007507 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0001501 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
EMBL:AJ002367 EMBL:AJ002368 EMBL:BC008829 EMBL:AF022654
EMBL:AF023203 IPI:IPI00218369 IPI:IPI00295006 IPI:IPI00793628
RefSeq:NP_001157150.1 RefSeq:NP_003021.3 RefSeq:NP_006875.2
UniGene:Hs.55967 ProteinModelPortal:O60902 SMR:O60902 IntAct:O60902
STRING:O60902 PhosphoSite:O60902 PaxDb:O60902 PRIDE:O60902
DNASU:6474 Ensembl:ENST00000389589 Ensembl:ENST00000425436
GeneID:6474 KEGG:hsa:6474 UCSC:uc003fbr.3 UCSC:uc003fbs.3
UCSC:uc010hvw.3 CTD:6474 GeneCards:GC03M157813 HGNC:HGNC:10854
MIM:602504 neXtProt:NX_O60902 PharmGKB:PA35756 eggNOG:NOG113578
HOVERGEN:HBG007233 InParanoid:O60902 KO:K09331 OMA:CTEAGRD
OrthoDB:EOG41C6X2 GenomeRNAi:6474 NextBio:25151 ArrayExpress:O60902
Bgee:O60902 CleanEx:HS_SHOX2 Genevestigator:O60902
GermOnline:ENSG00000168779 Uniprot:O60902
Length = 331
Score = 143 (55.4 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 36/114 (31%), Positives = 59/114 (51%)
Query: 18 RSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFF 77
RS E +L E E K E +A +D+ ++ +R+ T Q+ E+E F
Sbjct: 104 RSREPGSPRLTEVSPELKDRKE----DAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLF 159
Query: 78 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHER-HENQILKAENQ 130
E +PD R+ELS+ LGL +V+ WFQN+R + + Q + H+ ++ A +Q
Sbjct: 160 DETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKGVLIGAASQ 213
>TAIR|locus:2062754 [details] [associations]
symbol:HB-7 "homeobox 7" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009409 "response to cold" evidence=RCA] [GO:0009414 "response
to water deprivation" evidence=IEP;RCA] [GO:0009737 "response to
abscisic acid stimulus" evidence=IEP;RCA] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009414 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG252905 HOGENOM:HOG000006310
ProtClustDB:CLSN2683559 EMBL:X67032 EMBL:AC005819 EMBL:AY045826
EMBL:AY091364 IPI:IPI00544746 PIR:H84905 PIR:S47137
RefSeq:NP_182191.1 UniGene:At.136 ProteinModelPortal:P46897
SMR:P46897 STRING:P46897 EnsemblPlants:AT2G46680.1 GeneID:819280
KEGG:ath:AT2G46680 GeneFarm:3966 TAIR:At2g46680 InParanoid:P46897
OMA:THHESEN PhylomeDB:P46897 Genevestigator:P46897 Uniprot:P46897
Length = 258
Score = 140 (54.3 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 45/144 (31%), Positives = 68/144 (47%)
Query: 54 SQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 113
S H K + R + QI+ +E F+ + +++ +L+RELGL+P QV WFQNKR +
Sbjct: 26 SNHNKNNQ-RRFSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWFQNKRARW 84
Query: 114 KAQH---------ERHEN-----QILKAENQKLRAENNRYKEALGNATCPN---CGGPAA 156
K++ + ++N + LK E Q L +E R KEA T C G A
Sbjct: 85 KSKQLETEYNILRQNYDNLASQFESLKKEKQALVSELQRLKEATQKKTQEEERQCSGDQA 144
Query: 157 LGEMSFDEQHLRIENARLR--EEI 178
+ +S E R R EE+
Sbjct: 145 VVALSSTHHESENEENRRRKPEEV 168
>UNIPROTKB|G3X7M1 [details] [associations]
symbol:SHOX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 KO:K09331 CTD:6473
OMA:SNHCPVH EMBL:DAAA02005893 RefSeq:NP_001178475.1
UniGene:Bt.106108 Ensembl:ENSBTAT00000038279 GeneID:615159
KEGG:bta:615159 NextBio:20899478 Uniprot:G3X7M1
Length = 306
Score = 142 (55.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 32/102 (31%), Positives = 54/102 (52%)
Query: 25 GKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRH-TQRQIQEMEAFFKECPHP 83
G+ E Y+ K + ++ E D+D K++R + T Q+ E+E F E +P
Sbjct: 90 GRAAEGIYDCKDKRDDVKSE-----DEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYP 144
Query: 84 DDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQIL 125
D R+ELS+ LGL +V+ WFQN+R + + Q + N ++
Sbjct: 145 DAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHNSVI 186
>UNIPROTKB|Q8NHV9 [details] [associations]
symbol:RHOXF1 "Rhox homeobox family member 1" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0003677 "DNA
binding" evidence=NAS] [GO:0007275 "multicellular organismal
development" evidence=NAS] [GO:0019953 "sexual reproduction"
evidence=IEP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0007276 "gamete generation"
evidence=NAS] [GO:0030518 "intracellular steroid hormone receptor
signaling pathway" evidence=NAS] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0007276 GO:GO:0030518 EMBL:AC005023
EMBL:AY099086 EMBL:BC069324 EMBL:BC069529 EMBL:BC103857
EMBL:BC103858 IPI:IPI00169348 RefSeq:NP_644811.1 UniGene:Hs.644617
ProteinModelPortal:Q8NHV9 SMR:Q8NHV9 IntAct:Q8NHV9 STRING:Q8NHV9
DMDM:37537960 PRIDE:Q8NHV9 DNASU:158800 Ensembl:ENST00000217999
GeneID:158800 KEGG:hsa:158800 UCSC:uc004esk.1 CTD:158800
GeneCards:GC0XM119243 HGNC:HGNC:29993 MIM:300446 neXtProt:NX_Q8NHV9
PharmGKB:PA162401287 eggNOG:NOG257474 HOGENOM:HOG000154120
InParanoid:Q8NHV9 OMA:NKRARCR OrthoDB:EOG4FFD33 PhylomeDB:Q8NHV9
GenomeRNAi:158800 NextBio:87811 Bgee:Q8NHV9 CleanEx:HS_RHOXF1
Genevestigator:Q8NHV9 GermOnline:ENSG00000101883 Uniprot:Q8NHV9
Length = 184
Score = 130 (50.8 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 30/93 (32%), Positives = 53/93 (56%)
Query: 43 MEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQV 102
ME P ++ P R R + T Q++E+E+ F+ +PD R+EL+ LG+ +V
Sbjct: 93 MEGPQPENMQP-----RTRRTKFTLLQVEELESVFRHTQYPDVPTRRELAENLGVTEDKV 147
Query: 103 KFWFQNKRTQMKAQHERHENQILKAENQKLRAE 135
+ WF+NKR + + RH+ +++ A +LRA+
Sbjct: 148 RVWFKNKRARCR----RHQRELMLAN--ELRAD 174
>MGI|MGI:1201673 [details] [associations]
symbol:Shox2 "short stature homeobox 2" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IMP] [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IMP] [GO:0002062 "chondrocyte
differentiation" evidence=IMP] [GO:0002063 "chondrocyte
development" evidence=IMP] [GO:0003170 "heart valve development"
evidence=IMP] [GO:0003209 "cardiac atrium morphogenesis"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IMP]
[GO:0032330 "regulation of chondrocyte differentiation"
evidence=IMP] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045880 "positive regulation of smoothened
signaling pathway" evidence=IMP] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0048557 "embryonic digestive tract morphogenesis" evidence=IMP]
[GO:0048598 "embryonic morphogenesis" evidence=IMP] [GO:0048743
"positive regulation of skeletal muscle fiber development"
evidence=IMP] [GO:0050772 "positive regulation of axonogenesis"
evidence=IMP] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IMP] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IMP] [GO:0060415 "muscle
tissue morphogenesis" evidence=IMP] [GO:2000172 "regulation of
branching morphogenesis of a nerve" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 EMBL:U66918 MGI:MGI:1201673
GO:GO:0005634 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030326 GO:GO:0050772
GO:GO:0032330 GO:GO:0001649 HOGENOM:HOG000231518 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GeneTree:ENSGT00700000104279 GO:GO:0060272 GO:GO:0002053
GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 CTD:6474
eggNOG:NOG113578 HOVERGEN:HBG007233 KO:K09331 OMA:CTEAGRD
OrthoDB:EOG41C6X2 EMBL:U67055 EMBL:U65071 EMBL:U65072
IPI:IPI00230342 IPI:IPI00625691 RefSeq:NP_038693.1 UniGene:Mm.39093
ProteinModelPortal:P70390 SMR:P70390 STRING:P70390
PhosphoSite:P70390 PRIDE:P70390 Ensembl:ENSMUST00000029422
Ensembl:ENSMUST00000162060 Ensembl:ENSMUST00000162439 GeneID:20429
KEGG:mmu:20429 UCSC:uc008pld.1 UCSC:uc008ple.1 InParanoid:P70390
NextBio:298446 Bgee:P70390 CleanEx:MM_SHOX2 Genevestigator:P70390
GermOnline:ENSMUSG00000027833 GO:GO:0003170 Uniprot:P70390
Length = 331
Score = 140 (54.3 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 35/114 (30%), Positives = 59/114 (51%)
Query: 18 RSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFF 77
RS E +L E E K + +A +D+ ++ +R+ T Q+ E+E F
Sbjct: 104 RSREPGSPRLTEVSPELKDRKD----DAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLF 159
Query: 78 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHER-HENQILKAENQ 130
E +PD R+ELS+ LGL +V+ WFQN+R + + Q + H+ ++ A +Q
Sbjct: 160 DETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKGVLIGAASQ 213
>UNIPROTKB|F1NDZ5 [details] [associations]
symbol:LMX1B "LIM/homeobox protein LMX-1.2" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0002930 "trabecular meshwork
development" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0021587
"cerebellum morphogenesis" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0030199
"collagen fibril organization" evidence=IEA] [GO:0030901 "midbrain
development" evidence=IEA] [GO:0035108 "limb morphogenesis"
evidence=IEA] [GO:0035265 "organ growth" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0008283 GO:GO:0008219 GO:GO:0043565
GO:GO:0008270 GO:GO:0030199 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0035265
GeneTree:ENSGT00700000104050 IPI:IPI00599399 OMA:NRMEGMM
EMBL:AADN02026296 EMBL:AADN02026297 EMBL:AADN02026298
EMBL:AADN02031658 Ensembl:ENSGALT00000001376 Uniprot:F1NDZ5
Length = 377
Score = 141 (54.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 41/129 (31%), Positives = 66/129 (51%)
Query: 21 ESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKEC 80
+SD K ++D + K + S D +DP + PKR R TQ++ + +A F+
Sbjct: 160 DSDSVKSDDEDGDVKPTKGQVTQGKGSDDGKDP-RRPKRPRTILTTQQR-RAFKASFEVS 217
Query: 81 PHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKLRAE--NNR 138
P K R+ L+ E GL V+ WFQN+R +MK RH+ Q + +Q+L E +NR
Sbjct: 218 SKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQRLGQEVMSNR 277
Query: 139 YKEALGNAT 147
+ + + T
Sbjct: 278 MEGMMTSYT 286
>UNIPROTKB|P53413 [details] [associations]
symbol:LMX1B "LIM/homeobox protein LMX-1.2" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 HOGENOM:HOG000231629
eggNOG:NOG243427 HOVERGEN:HBG052335 KO:K09371 OrthoDB:EOG4QFWDN
EMBL:L39880 EMBL:U41823 IPI:IPI00599399 RefSeq:NP_990689.1
UniGene:Gga.758 ProteinModelPortal:P53413 STRING:P53413
GeneID:396312 KEGG:gga:396312 CTD:4010 InParanoid:P53413
NextBio:20816360 Uniprot:P53413
Length = 377
Score = 141 (54.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 41/129 (31%), Positives = 66/129 (51%)
Query: 21 ESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKEC 80
+SD K ++D + K + S D +DP + PKR R TQ++ + +A F+
Sbjct: 160 DSDSVKSDDEDGDVKPTKGQVTQGKGSDDGKDP-RRPKRPRTILTTQQR-RAFKASFEVS 217
Query: 81 PHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKLRAE--NNR 138
P K R+ L+ E GL V+ WFQN+R +MK RH+ Q + +Q+L E +NR
Sbjct: 218 SKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQRLGQEVMSNR 277
Query: 139 YKEALGNAT 147
+ + + T
Sbjct: 278 MEGMMTSYT 286
>ZFIN|ZDB-GENE-051030-21 [details] [associations]
symbol:shox "short stature homeobox" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-051030-21 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104279 EMBL:BX294669 IPI:IPI00742503
Ensembl:ENSDART00000029238 ArrayExpress:F1Q5T6 Bgee:F1Q5T6
Uniprot:F1Q5T6
Length = 304
Score = 139 (54.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 34/107 (31%), Positives = 57/107 (53%)
Query: 21 ESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRH-TQRQIQEMEAFFKE 79
E + + + Y+ K E ++ E D+D K++R + T Q+ E+E F E
Sbjct: 76 EFSVTRASDGIYDCKDKKEDVKSE-----DEDAQSKLKQRRSRTNFTLEQLNELERLFDE 130
Query: 80 CPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQ-HERHENQIL 125
+PD R+ELS+ LGL +V+ WFQN+R + + Q ++ H+ IL
Sbjct: 131 THYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVIL 177
>UNIPROTKB|F1NU45 [details] [associations]
symbol:NKX2-6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104098 EMBL:AADN02055465 IPI:IPI00582020
Ensembl:ENSGALT00000000497 OMA:SYGVGYT Uniprot:F1NU45
Length = 159
Score = 113 (44.8 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 52 DPSQHPKR--KRYHR--HTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQ 107
DP HPK+ +R R +Q Q+ E+E FK+ + +R+ L+ L L QVK WFQ
Sbjct: 20 DPCHHPKQPQRRKPRVLFSQTQVLELERRFKQQKYLSALEREHLANVLQLTSTQVKIWFQ 79
Query: 108 NKRTQMKAQHE 118
N+R + K Q +
Sbjct: 80 NRRYKCKRQRQ 90
Score = 42 (19.8 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 12/36 (33%), Positives = 15/36 (41%)
Query: 190 GKPL--SSFPHLTPRSLDLGFTNLGTQSGFVGEMYG 223
GKP S PHL P + + + T G YG
Sbjct: 115 GKPCFEGSQPHLAPYGITVSPYSYSTYYSAYGVSYG 150
>UNIPROTKB|E1BBM6 [details] [associations]
symbol:VAX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0009950 "dorsal/ventral axis specification"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0030900 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0060041
GO:GO:0007409 GO:GO:0048048 GO:GO:0000976 GO:GO:0031490
GO:GO:0009950 GeneTree:ENSGT00680000099870 KO:K09318 CTD:25806
OMA:LGEADHC EMBL:DAAA02030410 EMBL:DAAA02030411 IPI:IPI00689758
RefSeq:NP_001179242.1 UniGene:Bt.106472 Ensembl:ENSBTAT00000014023
GeneID:539808 KEGG:bta:539808 NextBio:20878236 Uniprot:E1BBM6
Length = 286
Score = 138 (53.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 34/96 (35%), Positives = 48/96 (50%)
Query: 42 EMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 101
E+ P G D D PKR R T Q+ +E F+ C + ++R EL+R+L L Q
Sbjct: 87 EIVLPKGLDLD---RPKRTRTS-FTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQ 142
Query: 102 VKFWFQNKRTQMKAQHERHENQILKAENQKLRAENN 137
VK WFQN+RT+ K R + + K A +N
Sbjct: 143 VKVWFQNRRTKQKKDQSRDLEKRASSSASKAFATSN 178
>FB|FBgn0025334 [details] [associations]
symbol:PHDP "Putative homeodomain protein" species:7227
"Drosophila melanogaster" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 EMBL:AE013599 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:P06601
GeneTree:ENSGT00700000104256 FlyBase:FBgn0025334 EMBL:BT028839
RefSeq:NP_523834.1 UniGene:Dm.5689 SMR:Q9W1H7 IntAct:Q9W1H7
MINT:MINT-1561397 STRING:Q9W1H7 EnsemblMetazoa:FBtr0072224
GeneID:37788 KEGG:dme:Dmel_CG11182 UCSC:CG11182-RA CTD:37788
InParanoid:Q9W1H7 OMA:YKLRANE GenomeRNAi:37788 NextBio:805410
Uniprot:Q9W1H7
Length = 220
Score = 134 (52.2 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 32/92 (34%), Positives = 50/92 (54%)
Query: 48 GDDQ-DPSQHPKRKRYHR-HTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFW 105
GDD + K++R T Q+ E+E F E +PD R+E++ +L L +V+ W
Sbjct: 100 GDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVW 159
Query: 106 FQNKRTQMKAQHERHENQILKAENQKLRAENN 137
FQN+R + + Q ERH I+K ++ KL N
Sbjct: 160 FQNRRAKFRKQ-ERHAIYIMKDKSSKLDGRKN 190
>FB|FBgn0014949 [details] [associations]
symbol:btn "buttonless" species:7227 "Drosophila
melanogaster" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HSSP:P14653 EMBL:S75228 ProteinModelPortal:Q26381
FlyBase:FBgn0014949 InParanoid:Q26381 OrthoDB:EOG4RFJ98
Uniprot:Q26381
Length = 158
Score = 119 (46.9 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 37/120 (30%), Positives = 64/120 (53%)
Query: 11 HMFDMTRRSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPK-------RKRYH 63
+++D + SS +D KL E ++ ++ + ++ EAP+G + PSQ K RK
Sbjct: 34 YVYDHSASSSYADYNKL-ETNWCNEANDQWLQNEAPTGQEL-PSQRSKLRAISSNRKERT 91
Query: 64 RHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQ 123
++ Q++++EA F + +R E++ L L QVK WFQN+R MK + + E Q
Sbjct: 92 AFSKTQLKQLEAEFCYSNYLTRLRRYEIAVALELTERQVKVWFQNRR--MKCKRIKLEEQ 149
>RGD|1563291 [details] [associations]
symbol:Rhox10 "reproductive homeobox 10" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS50071 SMART:SM00389 RGD:1563291 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
eggNOG:NOG257474 GeneTree:ENSGT00530000063899 EMBL:DQ058657
IPI:IPI00608182 RefSeq:NP_001032670.1 UniGene:Rn.144547
Ensembl:ENSRNOT00000061539 GeneID:652926 KEGG:rno:652926
UCSC:RGD:1563291 CTD:434769 HOGENOM:HOG000136396 HOVERGEN:HBG093019
InParanoid:Q4TU73 OrthoDB:EOG4T7859 NextBio:714867
Genevestigator:Q4TU73 Uniprot:Q4TU73
Length = 201
Score = 131 (51.2 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 30/96 (31%), Positives = 56/96 (58%)
Query: 26 KLKED-DYETKSGTETM--EMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPH 82
K K++ YET+ T+ E E +G S + ++ ++H+ T Q+ E+E F+E +
Sbjct: 58 KYKQNYSYETRKETQARPSEPEKAAGTAACRSNN-RQIKHHKFTYAQLCELEKAFQETQY 116
Query: 83 PDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHE 118
PD +RK L+ + ++ +VK WF+NKR + + +H+
Sbjct: 117 PDAHRRKALAALIHVDECKVKAWFKNKRAKYRKKHK 152
>RGD|1595784 [details] [associations]
symbol:Hoxc9 "homeobox C9" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA;ISO] [GO:0048706 "embryonic skeletal
system development" evidence=ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1595784 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
eggNOG:NOG314669 EMBL:S76301 EMBL:M37568 IPI:IPI01016344 PIR:D43559
UniGene:Rn.91646 ProteinModelPortal:P18866 SMR:P18866 STRING:P18866
UCSC:RGD:1595784 HOVERGEN:HBG107057 Genevestigator:P18866
Uniprot:P18866
Length = 108
Score = 118 (46.6 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 32/90 (35%), Positives = 50/90 (55%)
Query: 53 PSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 112
P + R+ Y R+ Q E+E F P+ K+R E+S LGL QVK WFQN+R
Sbjct: 13 PGRRSGRQTYSRY---QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRR-- 67
Query: 113 MKAQHERHENQILKA-ENQKLRAENNRYKE 141
MK + E +++++ A + +K+ E N +E
Sbjct: 68 MKWKKENNKDKLPGARDEEKVEEEGNEEEE 97
>UNIPROTKB|P18866 [details] [associations]
symbol:Hoxc8 "Homeobox protein Hox-C8" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1595784 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 eggNOG:NOG314669 EMBL:S76301 EMBL:M37568
IPI:IPI01016344 PIR:D43559 UniGene:Rn.91646
ProteinModelPortal:P18866 SMR:P18866 STRING:P18866 UCSC:RGD:1595784
HOVERGEN:HBG107057 Genevestigator:P18866 Uniprot:P18866
Length = 108
Score = 118 (46.6 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 32/90 (35%), Positives = 50/90 (55%)
Query: 53 PSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 112
P + R+ Y R+ Q E+E F P+ K+R E+S LGL QVK WFQN+R
Sbjct: 13 PGRRSGRQTYSRY---QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRR-- 67
Query: 113 MKAQHERHENQILKA-ENQKLRAENNRYKE 141
MK + E +++++ A + +K+ E N +E
Sbjct: 68 MKWKKENNKDKLPGARDEEKVEEEGNEEEE 97
>TAIR|locus:2079542 [details] [associations]
symbol:HB-12 "homeobox 12" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP;RCA;IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0009615 "response to virus" evidence=IEP] [GO:0006970 "response
to osmotic stress" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0009737 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0045893 GO:GO:0009651 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 GO:GO:0009615 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AF001949 EMBL:AL138642 EMBL:AY059828
EMBL:BT002206 EMBL:AY087187 IPI:IPI00522302 PIR:T47981 PIR:T51751
RefSeq:NP_191748.1 UniGene:At.25517 HSSP:P02836
ProteinModelPortal:Q9M276 SMR:Q9M276 STRING:Q9M276
EnsemblPlants:AT3G61890.1 GeneID:825362 KEGG:ath:AT3G61890
GeneFarm:3970 TAIR:At3g61890 eggNOG:NOG252905 HOGENOM:HOG000006310
InParanoid:Q9M276 KO:K09338 OMA:HELMNIV PhylomeDB:Q9M276
ProtClustDB:CLSN2683559 Genevestigator:Q9M276 GermOnline:AT3G61890
Uniprot:Q9M276
Length = 235
Score = 134 (52.2 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 28/92 (30%), Positives = 48/92 (52%)
Query: 44 EAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVK 103
E SG + + K R ++ QI+ +E F+ + +++ +++RELGL+P QV
Sbjct: 13 EISSGMTMNKKKMKKSNNQKRFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVA 72
Query: 104 FWFQNKRTQMKAQHERHENQILKAENQKLRAE 135
WFQNKR + K + E L+A L ++
Sbjct: 73 IWFQNKRARWKTKQLEKEYNTLRANYNNLASQ 104
>WB|WBGene00000445 [details] [associations]
symbol:ceh-22 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0043282 "pharyngeal muscle
development" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0006898 GO:GO:0040010 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:Z73974 GO:GO:0043282
EMBL:U10080 EMBL:U10081 PIR:T21552 RefSeq:NP_001076742.1
UniGene:Cel.19760 ProteinModelPortal:P41936 SMR:P41936
STRING:P41936 PaxDb:P41936 GeneID:179485 KEGG:cel:CELE_F29F11.5
UCSC:F29F11.5a CTD:179485 WormBase:F29F11.5a eggNOG:NOG310976
HOGENOM:HOG000217930 InParanoid:P41936 NextBio:905598
ArrayExpress:P41936 Uniprot:P41936
Length = 346
Score = 138 (53.6 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 33/104 (31%), Positives = 51/104 (49%)
Query: 14 DMTRRSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEM 73
DM S+ S+ K +D + + E +E E +D + KRKR T+ Q E+
Sbjct: 145 DMLDNSNTSNGNKSDKDGIKLEDEDEILEDEENDEEDDGTGKRKKRKRRVLFTKAQTYEL 204
Query: 74 EAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQH 117
E F+ + +R+ L+ ++ L P QVK WFQN R + K H
Sbjct: 205 ERRFRSQKYLSAPEREALAMQIRLTPTQVKIWFQNHRYKTKKSH 248
>UNIPROTKB|E2RRG5 [details] [associations]
symbol:PITX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051216 "cartilage development" evidence=IEA]
[GO:0048625 "myoblast cell fate commitment" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0021983 "pituitary gland
development" evidence=IEA] [GO:0014707 "branchiomeric skeletal
muscle development" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR016233 InterPro:IPR017970 Pfam:PF00046
PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005737 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0051216 GO:GO:0035116 GO:GO:0021983 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000988 GO:GO:0048625
GO:GO:0014707 CTD:5307 KO:K09356 OMA:CKNSYLP
GeneTree:ENSGT00700000104438 EMBL:AAEX03007790 RefSeq:XP_850773.1
Ensembl:ENSCAFT00000001631 GeneID:481513 KEGG:cfa:481513
NextBio:20856289 Uniprot:E2RRG5
Length = 313
Score = 137 (53.3 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 33/104 (31%), Positives = 61/104 (58%)
Query: 19 SSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRH-TQRQIQEMEAFF 77
SS+++L + KE E K ++ A G +DP++ K++R H T +Q+QE+EA F
Sbjct: 49 SSDTELPE-KERGGEVKGPEDSGAGGAGCGGAEDPAKKKKQRRQRTHFTSQQLQELEATF 107
Query: 78 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHE 121
+ +PD R+E++ L +V+ WF+N+R + + + ER++
Sbjct: 108 QRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWR-KRERNQ 150
>RGD|69253 [details] [associations]
symbol:Pitx1 "paired-like homeodomain 1" species:10116 "Rattus
norvegicus" [GO:0000988 "protein binding transcription factor
activity" evidence=IEA;ISO] [GO:0001501 "skeletal system
development" evidence=ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:0005634
"nucleus" evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IMP] [GO:0014707
"branchiomeric skeletal muscle development" evidence=IEA;ISO]
[GO:0021983 "pituitary gland development" evidence=IEA;ISO]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA;ISO]
[GO:0035137 "hindlimb morphogenesis" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048625 "myoblast cell fate commitment"
evidence=IEA;ISO] [GO:0051216 "cartilage development"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR016233 InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:69253
GO:GO:0005737 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0051216 GO:GO:0035116 GO:GO:0021983
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000988
GO:GO:0048625 GO:GO:0014707 eggNOG:NOG249113 HOGENOM:HOG000273886
HOVERGEN:HBG068770 OrthoDB:EOG4R503Q CTD:5307 KO:K09356 OMA:CKNSYLP
EMBL:AB047298 EMBL:BC061966 IPI:IPI00198722 RefSeq:NP_446076.1
UniGene:Rn.74248 ProteinModelPortal:Q99NA7 SMR:Q99NA7 STRING:Q99NA7
Ensembl:ENSRNOT00000015307 GeneID:113983 KEGG:rno:113983
UCSC:RGD:69253 GeneTree:ENSGT00700000104438 InParanoid:Q99NA7
NextBio:618121 Genevestigator:Q99NA7 GermOnline:ENSRNOG00000011423
Uniprot:Q99NA7
Length = 315
Score = 137 (53.3 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 34/104 (32%), Positives = 59/104 (56%)
Query: 19 SSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRH-TQRQIQEMEAFF 77
SS++DL KE E K + A G +DP++ K++R H T +Q+QE+EA F
Sbjct: 50 SSDADLPD-KERGGEAKVPEDGGAGSAGCGSAEDPAKKKKQRRQRTHFTSQQLQELEATF 108
Query: 78 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHE 121
+ +PD R+E++ L +V+ WF+N+R + + + ER++
Sbjct: 109 QRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWR-KRERNQ 151
>UNIPROTKB|Q8N693 [details] [associations]
symbol:ESX1 "Homeobox protein ESX1" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0051726
"regulation of cell cycle" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043565 GO:GO:0003700 GO:GO:0006357
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0051726
EMBL:CH471120 GO:GO:0060716 InterPro:IPR013847 PRINTS:PR00028
GO:GO:0060713 EMBL:AY114148 EMBL:AL049631 EMBL:BC042633
EMBL:BC053599 IPI:IPI00166966 RefSeq:NP_703149.1 UniGene:Hs.223782
ProteinModelPortal:Q8N693 SMR:Q8N693 IntAct:Q8N693 STRING:Q8N693
PhosphoSite:Q8N693 DMDM:116241356 PRIDE:Q8N693
Ensembl:ENST00000372588 GeneID:80712 KEGG:hsa:80712 UCSC:uc004ely.3
CTD:80712 GeneCards:GC0XM103494 HGNC:HGNC:14865 HPA:HPA051992
MIM:300154 neXtProt:NX_Q8N693 PharmGKB:PA27892 eggNOG:NOG264325
HOGENOM:HOG000198273 HOVERGEN:HBG084082 InParanoid:Q8N693
OMA:MAPVPPW OrthoDB:EOG4MKNHC PhylomeDB:Q8N693 GenomeRNAi:80712
NextBio:71013 ArrayExpress:Q8N693 Bgee:Q8N693 CleanEx:HS_ESX1
Genevestigator:Q8N693 GermOnline:ENSG00000123576 Uniprot:Q8N693
Length = 406
Score = 139 (54.0 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 35/100 (35%), Positives = 51/100 (51%)
Query: 17 RRSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHR--HTQRQIQEME 74
++ E L +LK++ E T A + Q P+RKR R TQ Q+QE+E
Sbjct: 96 QQQEEPPLLELKQEQEEPPQTTVEGPQPAEGPQTAEGPQPPERKRRRRTAFTQFQLQELE 155
Query: 75 AFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 114
FF E +PD R+ L+ L L +V+ WFQN+R + K
Sbjct: 156 NFFDESQYPDVVARERLAARLNLTEDRVQVWFQNRRAKWK 195
>MGI|MGI:1346018 [details] [associations]
symbol:Vax2 "ventral anterior homeobox containing gene 2"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0009950 "dorsal/ventral axis
specification" evidence=IMP] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0031490 "chromatin DNA binding" evidence=IDA]
[GO:0043010 "camera-type eye development" evidence=IGI] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IDA;IMP] [GO:0060041 "retina
development in camera-type eye" evidence=IDA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:1346018 GO:GO:0005634 GO:GO:0005737
GO:GO:0016055 GO:GO:0030900 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0060041 GO:GO:0007409 GO:GO:0048048
GO:GO:0000976 GO:GO:0031490 GO:GO:0009950 eggNOG:NOG309408
GeneTree:ENSGT00680000099870 HOGENOM:HOG000049217
HOVERGEN:HBG007558 KO:K09318 OrthoDB:EOG4QVCD6 CTD:25806
OMA:LGEADHC EMBL:AB020498 EMBL:Y17792 EMBL:AF028715 IPI:IPI00123684
RefSeq:NP_036042.1 UniGene:Mm.307165 ProteinModelPortal:Q9WTP9
SMR:Q9WTP9 STRING:Q9WTP9 PhosphoSite:Q9WTP9 PRIDE:Q9WTP9
Ensembl:ENSMUST00000037807 GeneID:24113 KEGG:mmu:24113
InParanoid:Q9WTP9 NextBio:304143 Bgee:Q9WTP9 CleanEx:MM_VAX2
Genevestigator:Q9WTP9 GermOnline:ENSMUSG00000034777 Uniprot:Q9WTP9
Length = 292
Score = 136 (52.9 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 59/208 (28%), Positives = 87/208 (41%)
Query: 42 EMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 101
E+ P G D D PKR R T Q+ +E F+ C + ++R EL+R+L L Q
Sbjct: 90 EIVLPKGLDLD---RPKRTRTS-FTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQ 145
Query: 102 VKFWFQNKRTQMKAQHERHENQILKAENQKLRAENN--RYKEALGNATCPNCGGPAAL-- 157
VK WFQN+RT+ K R + + + A +N R E + P AL
Sbjct: 146 VKVWFQNRRTKQKKDQSRDLEKRASSSASEAFATSNVLRLLEQGRLLSVPRAPSLLALTP 205
Query: 158 GEMSFDEQHLRIENARLREEIDRISGIAAKYVGKPLSS-FPHLTPRS---LDL--GFTNL 211
G H R R++ + + PL P + S LDL G+ L
Sbjct: 206 GLPGLPASHRGTSLVDPRNSSPRLNPMPSASASSPLPPPLPAICFSSAPLLDLPAGY-KL 264
Query: 212 GTQSGFVGEMYGGCDLIRSISGPSEADK 239
G+ S F E Y + + + P ++DK
Sbjct: 265 GS-SAF--EPYSRLEQ-QKVGSPGQSDK 288
>UNIPROTKB|F1MU46 [details] [associations]
symbol:PITX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051216 "cartilage development" evidence=IEA]
[GO:0048625 "myoblast cell fate commitment" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0021983 "pituitary gland
development" evidence=IEA] [GO:0014707 "branchiomeric skeletal
muscle development" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR016233 InterPro:IPR017970 Pfam:PF00046
PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005737 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0051216 GO:GO:0035116 GO:GO:0021983 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000988 GO:GO:0048625
GO:GO:0014707 CTD:5307 KO:K09356 OMA:CKNSYLP
GeneTree:ENSGT00700000104438 EMBL:DAAA02020351 IPI:IPI01002575
RefSeq:NP_001192229.1 UniGene:Bt.11284 Ensembl:ENSBTAT00000006039
GeneID:508754 KEGG:bta:508754 NextBio:20868666 Uniprot:F1MU46
Length = 314
Score = 136 (52.9 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 33/104 (31%), Positives = 61/104 (58%)
Query: 19 SSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRH-TQRQIQEMEAFF 77
SS+++L + KE E K ++ A G +DP++ K++R H T +Q+QE+EA F
Sbjct: 50 SSDTELPE-KERGGEPKGPEDSGAGGAGCGGAEDPAKKKKQRRQRTHFTSQQLQELEATF 108
Query: 78 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHE 121
+ +PD R+E++ L +V+ WF+N+R + + + ER++
Sbjct: 109 QRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWR-KRERNQ 151
>UNIPROTKB|Q9UIW0 [details] [associations]
symbol:VAX2 "Ventral anterior homeobox 2" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA]
[GO:0009950 "dorsal/ventral axis specification" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0030900 "forebrain development" evidence=ISS]
[GO:0007398 "ectoderm development" evidence=TAS] [GO:0007601
"visual perception" evidence=TAS] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 EMBL:CH471053
GO:GO:0016055 GO:GO:0007601 GO:GO:0030900 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0060041 GO:GO:0007409
GO:GO:0048048 GO:GO:0000976 GO:GO:0007398 GO:GO:0031490
GO:GO:0009950 eggNOG:NOG309408 HOGENOM:HOG000049217
HOVERGEN:HBG007558 KO:K09318 OrthoDB:EOG4QVCD6 CTD:25806
EMBL:Y17791 EMBL:BT007035 EMBL:BC006336 IPI:IPI00018903
RefSeq:NP_036608.1 UniGene:Hs.249170 ProteinModelPortal:Q9UIW0
SMR:Q9UIW0 STRING:Q9UIW0 PhosphoSite:Q9UIW0 DMDM:20532295
PaxDb:Q9UIW0 PRIDE:Q9UIW0 DNASU:25806 Ensembl:ENST00000234392
GeneID:25806 KEGG:hsa:25806 UCSC:uc002shh.3 GeneCards:GC02P071127
HGNC:HGNC:12661 MIM:604295 neXtProt:NX_Q9UIW0 PharmGKB:PA37284
InParanoid:Q9UIW0 OMA:LGEADHC PhylomeDB:Q9UIW0 GenomeRNAi:25806
NextBio:47023 ArrayExpress:Q9UIW0 Bgee:Q9UIW0 CleanEx:HS_VAX2
Genevestigator:Q9UIW0 GermOnline:ENSG00000116035 Uniprot:Q9UIW0
Length = 290
Score = 135 (52.6 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 31/78 (39%), Positives = 42/78 (53%)
Query: 42 EMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 101
E+ P G D D PKR R T Q+ +E F+ C + ++R EL+R+L L Q
Sbjct: 90 EIVLPKGLDLD---RPKRTRTS-FTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQ 145
Query: 102 VKFWFQNKRTQMKAQHER 119
VK WFQN+RT+ K R
Sbjct: 146 VKVWFQNRRTKQKKDQSR 163
>TAIR|locus:2170194 [details] [associations]
symbol:HAT14 "homeobox from Arabidopsis thaliana"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:AP002032 EMBL:AJ431182 EMBL:BT005879 EMBL:AK227423 EMBL:U09334
IPI:IPI00522942 IPI:IPI00547278 PIR:T52367 RefSeq:NP_196289.2
RefSeq:NP_974743.1 UniGene:At.357 ProteinModelPortal:P46665
SMR:P46665 IntAct:P46665 PaxDb:P46665 PRIDE:P46665
EnsemblPlants:AT5G06710.1 GeneID:830560 KEGG:ath:AT5G06710
GeneFarm:3984 TAIR:At5g06710 eggNOG:NOG310615 InParanoid:P46665
OMA:KTSTPFY PhylomeDB:P46665 ProtClustDB:CLSN2917817
Genevestigator:P46665 Uniprot:P46665
Length = 336
Score = 134 (52.2 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 40/134 (29%), Positives = 64/134 (47%)
Query: 14 DMTRRSSESDLGKLKEDDYETKSGTETMEMEAP------SGDDQDPSQHPKRKRYHRHTQ 67
D S + D G +K YE +S ++ E S +D D RK+ R ++
Sbjct: 139 DSVTSSFQLDFG-IKSYGYERRSNKRDIDDEVERSASRASNEDNDDENGSTRKKL-RLSK 196
Query: 68 RQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKA 127
Q +E FKE + KQ+ L+++L L P QV+ WFQN+R + K + + + LK
Sbjct: 197 DQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKR 256
Query: 128 ENQKLRAENNRYKE 141
+ L EN R ++
Sbjct: 257 CCESLTEENRRLQK 270
Score = 45 (20.9 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 404 TLDRQCERLASSMA--NNIPAGDLCVITS 430
T+ CER+A+S A + A +LC+ TS
Sbjct: 294 TMCPSCERVATSAAQPSTSAAHNLCLSTS 322
Score = 40 (19.1 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 16/43 (37%), Positives = 20/43 (46%)
Query: 461 TTLSATGSDDVRVMTRKSMDDPGRPPGIVLSAATSFWIPVPPR 503
TTL+ S + RV T + + LS TS IPV PR
Sbjct: 291 TTLTMCPSCE-RVATSAAQPSTSAAHNLCLS--TSSLIPVKPR 330
>RGD|1586211 [details] [associations]
symbol:Hoxb8 "homeo box B8" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007625 "grooming behavior" evidence=ISO]
[GO:0008344 "adult locomotory behavior" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO]
[GO:0019233 "sensory perception of pain" evidence=ISO] [GO:0021516
"dorsal spinal cord development" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=ISO] [GO:0048705 "skeletal system
morphogenesis" evidence=ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1586211 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0045638 eggNOG:NOG314669 EMBL:M37565
IPI:IPI00476117 PIR:A43559 UniGene:Rn.231433
ProteinModelPortal:P18863 SMR:P18863 STRING:P18863 UCSC:RGD:1586211
Genevestigator:P18863 Uniprot:P18863
Length = 92
Score = 116 (45.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 27/83 (32%), Positives = 44/83 (53%)
Query: 53 PSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 112
PS ++ +++ Q E+E F P+ K+R E+S LGL QVK WFQN+R +
Sbjct: 6 PSSRRTQRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMK 65
Query: 113 MKAQHERHENQILKAENQKLRAE 135
K ++ + + K E ++L E
Sbjct: 66 WKKENNKDKFPSSKCEQEELEKE 88
>RGD|2301305 [details] [associations]
symbol:Rhox3 "reproductive homeobox on X chromosome 3"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS50071 SMART:SM00389 RGD:2301305
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GeneTree:ENSGT00530000064309 HOGENOM:HOG000230944
HOVERGEN:HBG063782 EMBL:DQ058651 IPI:IPI00679242
RefSeq:NP_001020917.3 RefSeq:NP_001129079.1 UniGene:Rn.18342
Ensembl:ENSRNOT00000041904 GeneID:100190895 GeneID:363439
KEGG:rno:100190895 KEGG:rno:363439 UCSC:RGD:2301305 CTD:100190895
InParanoid:Q4TU79 OrthoDB:EOG4C2HCN NextBio:20795562
Genevestigator:Q4TU79 Uniprot:Q4TU79
Length = 158
Score = 116 (45.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 53 PSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 112
P Q P+R+ HR TQ Q++E+E+ FK + RK+L+R +G+ VK WF+ +R Q
Sbjct: 92 PRQVPRRRLRHRFTQWQLEELESIFKANCFLSVEARKQLARWMGVTEAIVKRWFRKRREQ 151
Query: 113 MK 114
+
Sbjct: 152 YR 153
>WB|WBGene00000430 [details] [associations]
symbol:ceh-5 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:Z81036 PIR:S05706 PIR:T19335 RefSeq:NP_492586.2
ProteinModelPortal:P20269 SMR:P20269 EnsemblMetazoa:C16C2.1
GeneID:191616 KEGG:cel:CELE_C16C2.1 UCSC:C16C2.1 CTD:191616
WormBase:C16C2.1 eggNOG:NOG309408 GeneTree:ENSGT00680000099870
HOGENOM:HOG000017392 InParanoid:P20269 OMA:QNYWTAA NextBio:949690
Uniprot:P20269
Length = 134
Score = 116 (45.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 35/100 (35%), Positives = 53/100 (53%)
Query: 33 ETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELS 92
++ +G+E M +E P+ D + PKR R T Q++++E F + R +L+
Sbjct: 15 KSANGSEKM-LEIPAKLDLE---RPKRPRTV-FTDEQLEKLEESFNTSGYLSGSTRAKLA 69
Query: 93 RELGLEPLQVKFWFQNKRTQMKAQHERH--ENQILK-AEN 129
LGL QVK WFQN+RT+ K R + + LK AEN
Sbjct: 70 ESLGLSDNQVKVWFQNRRTKQKKIDSRDPIKPETLKPAEN 109
>RGD|621133 [details] [associations]
symbol:Vax2 "ventral anterior homeobox 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA;ISO] [GO:0009950
"dorsal/ventral axis specification" evidence=IEA;ISO] [GO:0016055
"Wnt receptor signaling pathway" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA;ISO;ISS] [GO:0031490
"chromatin DNA binding" evidence=IEA;ISO] [GO:0043010 "camera-type
eye development" evidence=ISO] [GO:0048048 "embryonic eye
morphogenesis" evidence=IEA;ISO] [GO:0060041 "retina development in
camera-type eye" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:621133 GO:GO:0005634 GO:GO:0005737 GO:GO:0016055
GO:GO:0030900 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0060041 GO:GO:0007409 GO:GO:0048048 GO:GO:0000976
GO:GO:0031490 GO:GO:0009950 eggNOG:NOG309408 HOGENOM:HOG000049217
HOVERGEN:HBG007558 KO:K09318 OrthoDB:EOG4QVCD6 CTD:25806
EMBL:AF113516 IPI:IPI00204233 RefSeq:NP_072159.1 UniGene:Rn.48765
ProteinModelPortal:Q9JLZ9 GeneID:64572 KEGG:rno:64572
UCSC:RGD:621133 InParanoid:Q9JLZ9 NextBio:613528
Genevestigator:Q9JLZ9 GermOnline:ENSRNOG00000013261 Uniprot:Q9JLZ9
Length = 292
Score = 135 (52.6 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 31/78 (39%), Positives = 42/78 (53%)
Query: 42 EMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 101
E+ P G D D PKR R T Q+ +E F+ C + ++R EL+R+L L Q
Sbjct: 90 EIVLPKGLDLD---RPKRTRTS-FTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQ 145
Query: 102 VKFWFQNKRTQMKAQHER 119
VK WFQN+RT+ K R
Sbjct: 146 VKVWFQNRRTKQKKDQSR 163
>UNIPROTKB|Q9JLZ9 [details] [associations]
symbol:Vax2 "Ventral anterior homeobox 2" species:10116
"Rattus norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:621133 GO:GO:0005634
GO:GO:0005737 GO:GO:0016055 GO:GO:0030900 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0060041 GO:GO:0007409
GO:GO:0048048 GO:GO:0000976 GO:GO:0031490 GO:GO:0009950
eggNOG:NOG309408 HOGENOM:HOG000049217 HOVERGEN:HBG007558 KO:K09318
OrthoDB:EOG4QVCD6 CTD:25806 EMBL:AF113516 IPI:IPI00204233
RefSeq:NP_072159.1 UniGene:Rn.48765 ProteinModelPortal:Q9JLZ9
GeneID:64572 KEGG:rno:64572 UCSC:RGD:621133 InParanoid:Q9JLZ9
NextBio:613528 Genevestigator:Q9JLZ9 GermOnline:ENSRNOG00000013261
Uniprot:Q9JLZ9
Length = 292
Score = 135 (52.6 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 31/78 (39%), Positives = 42/78 (53%)
Query: 42 EMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 101
E+ P G D D PKR R T Q+ +E F+ C + ++R EL+R+L L Q
Sbjct: 90 EIVLPKGLDLD---RPKRTRTS-FTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQ 145
Query: 102 VKFWFQNKRTQMKAQHER 119
VK WFQN+RT+ K R
Sbjct: 146 VKVWFQNRRTKQKKDQSR 163
>ZFIN|ZDB-GENE-041014-332 [details] [associations]
symbol:lmx1a "LIM homeobox transcription factor 1,
alpha" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-041014-332 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GeneTree:ENSGT00700000104050
HOGENOM:HOG000231629 CTD:4009 HOVERGEN:HBG052335 EMBL:BX296562
IPI:IPI00496510 RefSeq:NP_001020669.1 UniGene:Dr.108111
Ensembl:ENSDART00000019059 GeneID:558036 KEGG:dre:558036
eggNOG:NOG302270 InParanoid:Q5RI65 OMA:RLYSMQD OrthoDB:EOG4P8FJW
NextBio:20882278 Uniprot:Q5RI65
Length = 366
Score = 137 (53.3 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 48/174 (27%), Positives = 77/174 (44%)
Query: 7 FESHHMFDMTRRSSESDLGKLK--EDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHR 64
F + H + + SD GK + E+D + + +T +GD + + PKR R
Sbjct: 135 FCATHFHNQLASPTSSDSGKSEDIEEDNDDEDNLKTAGESNITGDVEH--KRPKRPRTIL 192
Query: 65 HTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQI 124
TQ++ + +A F+ P K R+ L+ E GL V+ WFQN+R +MK R + Q
Sbjct: 193 TTQQR-RAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLVRRQQQQK 251
Query: 125 LKAENQKLRAENNRYKEALGNATCP---NCGG--PAALGEMSFDEQHLRIENAR 173
Q+ R ++ A P C G P +S D Q L+++ R
Sbjct: 252 QTVCPQEKRESPSQQHTATSCGALPVELECAGSYPLPQQNLSLDSQSLKLDPFR 305
>ZFIN|ZDB-GENE-990415-237 [details] [associations]
symbol:rx2 "retinal homeobox gene 2" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0060219 "camera-type eye photoreceptor cell differentiation"
evidence=IGI] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990415-237 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 eggNOG:NOG261733 GO:GO:0060219 HOVERGEN:HBG021349
OrthoDB:EOG4V4387 KO:K09332 EMBL:AF001908 IPI:IPI00483924
RefSeq:NP_571301.1 UniGene:Dr.75762 ProteinModelPortal:O42357
SMR:O42357 STRING:O42357 GeneID:30473 KEGG:dre:30473 CTD:30473
InParanoid:O42357 NextBio:20806866 ArrayExpress:O42357
Uniprot:O42357
Length = 327
Score = 136 (52.9 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 32/124 (25%), Positives = 63/124 (50%)
Query: 17 RRSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRH----TQRQIQE 72
++S D G D + G +E+ S P + +K++ R+ T Q+ E
Sbjct: 90 QQSVYHDTGLFSTDKCDADLGDPRSNVESDSRSPDIPDEDQPKKKHRRNRTTFTTYQLHE 149
Query: 73 MEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKL 132
+E F++ +PD R+EL+ ++ L ++V+ WFQN+R + + Q E+ + +K + +
Sbjct: 150 LERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQ-EKMDTGTMKLHDSPI 208
Query: 133 RAEN 136
R+ N
Sbjct: 209 RSFN 212
>UNIPROTKB|E2QZN5 [details] [associations]
symbol:SHOX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 Ensembl:ENSCAFT00000014128 Uniprot:E2QZN5
Length = 334
Score = 136 (52.9 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 28/88 (31%), Positives = 50/88 (56%)
Query: 44 EAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVK 103
+A +D+ ++ +R+ T Q+ E+E F E +PD R+ELS+ LGL +V+
Sbjct: 129 DAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 188
Query: 104 FWFQNKRTQMKAQHER-HENQILKAENQ 130
WFQN+R + + Q + H+ ++ A +Q
Sbjct: 189 VWFQNRRAKCRKQENQLHKGVLIGAASQ 216
>TAIR|locus:2137599 [details] [associations]
symbol:HAT22 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009735 "response to cytokinin stimulus"
evidence=IEP] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009735 EMBL:AL035709
EMBL:AL161592 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:U09336 EMBL:U09337 EMBL:AJ441254 EMBL:BT002318 EMBL:AY087563
EMBL:M90417 IPI:IPI00522748 PIR:T06026 RefSeq:NP_195493.1
UniGene:At.23912 ProteinModelPortal:P46604 SMR:P46604 IntAct:P46604
EnsemblPlants:AT4G37790.1 GeneID:829935 KEGG:ath:AT4G37790
GeneFarm:3981 TAIR:At4g37790 eggNOG:NOG259949 InParanoid:P46604
OMA:TTERVVC PhylomeDB:P46604 ProtClustDB:CLSN2683864
Genevestigator:P46604 GermOnline:AT4G37790 Uniprot:P46604
Length = 278
Score = 134 (52.2 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 41/127 (32%), Positives = 63/127 (49%)
Query: 17 RRSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAF 76
+R E G +E+ ET TE + S D D RK+ R T++Q +E
Sbjct: 86 KREREISGGDGEEEAEET---TERVVCSRVSDDHDDEEGVSARKKL-RLTKQQSALLEDN 141
Query: 77 FKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKLRAEN 136
FK + KQ++ L+R+L L P QV+ WFQN+R + K + + + LK + L EN
Sbjct: 142 FKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDEN 201
Query: 137 NRYKEAL 143
R ++ L
Sbjct: 202 RRLQKEL 208
>UNIPROTKB|Q9PVX0 [details] [associations]
symbol:RX2 "Retinal homeobox protein Rx2" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 HOVERGEN:HBG021349
EMBL:AB020318 IPI:IPI00590568 UniGene:Gga.27
ProteinModelPortal:Q9PVX0 SMR:Q9PVX0 Uniprot:Q9PVX0
Length = 317
Score = 135 (52.6 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 31/101 (30%), Positives = 56/101 (55%)
Query: 37 GTETMEMEAPSGDDQDPSQHPKRKRYHRH-----TQRQIQEMEAFFKECPHPDDKQRKEL 91
G+ + E+ A G D PS + K+ HR T Q+ E+E F++ +PD R+EL
Sbjct: 96 GSASPELPAGDGGDGKPSDEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREEL 155
Query: 92 SRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKL 132
+ ++ L ++V+ WFQN+R + + Q E+ E +K ++ +
Sbjct: 156 AMKVNLPEVRVQVWFQNRRAKWRRQ-EKLEVSSMKLQDSPI 195
>UNIPROTKB|F1RSD4 [details] [associations]
symbol:PRRX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104279
EMBL:CU138499 Ensembl:ENSSSCT00000006879 Uniprot:F1RSD4
Length = 141
Score = 115 (45.5 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 28/88 (31%), Positives = 48/88 (54%)
Query: 49 DDQDPSQHPKRKRYHRH----TQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKF 104
DDQ S+ K+++ R+ Q+Q +E F+ +PD R++L+R + L +V+
Sbjct: 3 DDQLNSEEKKKRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQV 62
Query: 105 WFQNKRTQMKAQHERHENQILKAENQKL 132
WFQN+R A+ R+E +L +N L
Sbjct: 63 WFQNRR----AKFRRNERAMLANKNASL 86
>UNIPROTKB|E1C654 [details] [associations]
symbol:VAX1 "Ventral anterior homeobox 1" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00680000099870 EMBL:AADN02030950
EMBL:AADN02030951 EMBL:AADN02030952 IPI:IPI00682449
Ensembl:ENSGALT00000033072 Uniprot:E1C654
Length = 219
Score = 130 (50.8 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 30/73 (41%), Positives = 41/73 (56%)
Query: 42 EMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 101
E+ P G D D PKR R T Q+ +E F+ C + ++R EL+R+L L Q
Sbjct: 87 EIILPKGLDLD---RPKRTRTS-FTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQ 142
Query: 102 VKFWFQNKRTQMK 114
VK WFQN+RT+ K
Sbjct: 143 VKVWFQNRRTKQK 155
>UNIPROTKB|F1P5G0 [details] [associations]
symbol:VAX1 "Ventral anterior homeobox 1" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00680000099870 EMBL:AADN02030950
EMBL:AADN02030951 EMBL:AADN02030952 IPI:IPI01017344
Ensembl:ENSGALT00000015072 Uniprot:F1P5G0
Length = 220
Score = 130 (50.8 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 30/73 (41%), Positives = 41/73 (56%)
Query: 42 EMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 101
E+ P G D D PKR R T Q+ +E F+ C + ++R EL+R+L L Q
Sbjct: 87 EIILPKGLDLD---RPKRTRTS-FTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQ 142
Query: 102 VKFWFQNKRTQMK 114
VK WFQN+RT+ K
Sbjct: 143 VKVWFQNRRTKQK 155
>UNIPROTKB|E1BBR5 [details] [associations]
symbol:PITX3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0070306
"lens fiber cell differentiation" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0030901 "midbrain
development" evidence=IEA] [GO:0007626 "locomotory behavior"
evidence=IEA] [GO:0002089 "lens morphogenesis in camera-type eye"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045893 GO:GO:0071542
GO:GO:0043565 GO:GO:0007626 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0048666 GO:GO:0030901 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0002089 GO:GO:0070306
GeneTree:ENSGT00700000104438 CTD:5309 KO:K09357 OMA:LCKGGFA
EMBL:DAAA02058999 IPI:IPI00714094 RefSeq:NP_001179234.1
UniGene:Bt.74425 PRIDE:E1BBR5 Ensembl:ENSBTAT00000020847
GeneID:512000 KEGG:bta:512000 NextBio:20870203 Uniprot:E1BBR5
Length = 302
Score = 134 (52.2 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 27/92 (29%), Positives = 50/92 (54%)
Query: 36 SGTETMEMEAPSGDDQDPSQHPKRKRYHRH-TQRQIQEMEAFFKECPHPDDKQRKELSRE 94
S +E + P G +D S K++R H T +Q+QE+EA F+ +PD R+E++
Sbjct: 39 SDSEKASVSLPGGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVW 98
Query: 95 LGLEPLQVKFWFQNKRTQMKAQHERHENQILK 126
L +V+ WF+N+R + + + + ++ K
Sbjct: 99 TNLTEARVRVWFKNRRAKWRKRERSQQAELCK 130
>ZFIN|ZDB-GENE-030904-8 [details] [associations]
symbol:vax2 "ventral anterior homeobox 2"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0030900 "forebrain
development" evidence=ISS] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0061386 "closure of optic fissure"
evidence=IMP] [GO:0090259 "regulation of retinal ganglion cell axon
guidance" evidence=IMP] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] [GO:0021554 "optic nerve
development" evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-030904-8 GO:GO:0005634 GO:GO:0016055 GO:GO:0030900
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0060041 GO:GO:0000976 GO:GO:0061386 eggNOG:NOG309408
GeneTree:ENSGT00680000099870 GO:GO:0021554 HOGENOM:HOG000049217
HOVERGEN:HBG007558 KO:K09318 OrthoDB:EOG4QVCD6 GO:GO:0090259
EMBL:AY183363 IPI:IPI00501587 RefSeq:NP_919390.1 UniGene:Dr.88632
ProteinModelPortal:Q801E1 STRING:Q801E1 Ensembl:ENSDART00000081620
GeneID:373869 KEGG:dre:373869 CTD:25806 InParanoid:Q801E1
OMA:LSAVHRT NextBio:20813406 ArrayExpress:Q801E1 Bgee:Q801E1
Uniprot:Q801E1
Length = 307
Score = 134 (52.2 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 32/95 (33%), Positives = 49/95 (51%)
Query: 42 EMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 101
E+ P G D D PKR R T Q+ +E F+ C + ++R EL+R+L L Q
Sbjct: 91 EIVLPKGLDLD---RPKRTRTS-FTAEQLYRLELEFQRCQYVVGRERTELARQLNLSETQ 146
Query: 102 VKFWFQNKRTQMKAQHERHENQILKAENQKLRAEN 136
VK WFQN+RT+ K + ++ + ++ L N
Sbjct: 147 VKVWFQNRRTKQKKDQTKDTDKRSSSTSESLATCN 181
>UNIPROTKB|Q9PU20 [details] [associations]
symbol:vax2-a "Ventral anterior homeobox 2a" species:8355
"Xenopus laevis" [GO:0030900 "forebrain development" evidence=ISS]
[GO:0060322 "head development" evidence=IMP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0016055 GO:GO:0030900
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0060322
HOVERGEN:HBG007558 KO:K09318 EMBL:AJ238649 RefSeq:NP_001081712.1
UniGene:Xl.224 ProteinModelPortal:Q9PU20 GeneID:398011
KEGG:xla:398011 CTD:398011 Xenbase:XB-GENE-492927 Uniprot:Q9PU20
Length = 302
Score = 135 (52.6 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 31/78 (39%), Positives = 42/78 (53%)
Query: 42 EMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 101
E+ P G D D PKR R T Q+ +E F+ C + ++R EL+R+L L Q
Sbjct: 93 EIVLPKGLDLD---RPKRTRTS-FTAEQLYRLELEFQRCQYVVGRERTELARQLNLSETQ 148
Query: 102 VKFWFQNKRTQMKAQHER 119
VK WFQN+RT+ K R
Sbjct: 149 VKVWFQNRRTKQKKDQSR 166
Score = 40 (19.1 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 346 PTSKCRRRPSGCLIQELPNGY 366
PTS C P + E+P+GY
Sbjct: 256 PTSLCFPGPLLGGLHEIPSGY 276
>UNIPROTKB|A6NLW8 [details] [associations]
symbol:DUXA "Double homeobox protein A" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:AC025588
IPI:IPI00556392 RefSeq:NP_001012747.1 UniGene:Hs.585857
ProteinModelPortal:A6NLW8 SMR:A6NLW8 PhosphoSite:A6NLW8
PRIDE:A6NLW8 Ensembl:ENST00000554048 GeneID:503835 KEGG:hsa:503835
UCSC:uc002qoa.1 CTD:503835 GeneCards:GC19M057663 H-InvDB:HIX0016200
HGNC:HGNC:32179 MIM:611168 neXtProt:NX_A6NLW8 PharmGKB:PA142671924
eggNOG:NOG289976 HOGENOM:HOG000112297 InParanoid:A6NLW8 OMA:PGYATKQ
OrthoDB:EOG4N04FW GenomeRNAi:503835 NextBio:112042 Bgee:A6NLW8
CleanEx:HS_DUXA Genevestigator:A6NLW8 Uniprot:A6NLW8
Length = 204
Score = 128 (50.1 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 36/120 (30%), Positives = 60/120 (50%)
Query: 32 YETKSGTETMEMEAPSGDDQDPSQHPKRK-RYHRHTQR--QIQEM-EAFFKECPHPDDKQ 87
++ + ET+E G DQ + R+ R R T Q+ + +AF K P+P
Sbjct: 72 FQKRPEAETLESSQSQGQDQPGVEFQSREARRCRTTYSASQLHTLIKAFMKN-PYPGIDS 130
Query: 88 RKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKLRAENNRYKEALGNAT 147
R+EL++E+G+ +V+ WFQN+R+++ Q +R L+ E Q E + E N T
Sbjct: 131 REELAKEIGVPESRVQIWFQNRRSRLLLQRKREPVASLEQEEQGKIPEGLQGAEDTQNGT 190
>ZFIN|ZDB-GENE-060421-3623 [details] [associations]
symbol:pitx1 "paired-like homeodomain
transcription factor 1" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-060421-3623
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 HOVERGEN:HBG068770 OMA:CKNSYLP
GeneTree:ENSGT00700000104438 EMBL:CABZ01050114 EMBL:CABZ01050115
EMBL:EU580407 IPI:IPI00632106 UniGene:Dr.93570 STRING:B2LT56
Ensembl:ENSDART00000062803 Uniprot:B2LT56
Length = 285
Score = 133 (51.9 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 30/110 (27%), Positives = 58/110 (52%)
Query: 16 TRRSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEA 75
TR + E+ + D E ++E + G+ DP + +R++ T +Q+QE+EA
Sbjct: 18 TRETLENTSSE--SSDTEAAEKERSVEQRSDDGNADDPKKKKQRRQRTHFTSQQLQELEA 75
Query: 76 FFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQIL 125
F+ +PD R+E++ L +V+ WF+N+R + + + ER++ L
Sbjct: 76 TFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWR-KRERNQQMDL 124
>UNIPROTKB|F1S139 [details] [associations]
symbol:PITX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000288 "positive regulation of myoblast proliferation"
evidence=IEA] [GO:0070986 "left/right axis specification"
evidence=IEA] [GO:0061325 "cell proliferation involved in outflow
tract morphogenesis" evidence=IEA] [GO:0061072 "iris morphogenesis"
evidence=IEA] [GO:0061031 "endodermal digestive tract
morphogenesis" evidence=IEA] [GO:0060578 "superior vena cava
morphogenesis" evidence=IEA] [GO:0060577 "pulmonary vein
morphogenesis" evidence=IEA] [GO:0060460 "left lung morphogenesis"
evidence=IEA] [GO:0060412 "ventricular septum morphogenesis"
evidence=IEA] [GO:0055015 "ventricular cardiac muscle cell
development" evidence=IEA] [GO:0055009 "atrial cardiac muscle
tissue morphogenesis" evidence=IEA] [GO:0051219 "phosphoprotein
binding" evidence=IEA] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042476 "odontogenesis" evidence=IEA] [GO:0035993
"deltoid tuberosity development" evidence=IEA] [GO:0035886
"vascular smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0031076
"embryonic camera-type eye development" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0021983 "pituitary
gland development" evidence=IEA] [GO:0021855 "hypothalamus cell
migration" evidence=IEA] [GO:0021763 "subthalamic nucleus
development" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0007520 "myoblast fusion" evidence=IEA]
[GO:0007368 "determination of left/right symmetry" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003350 "pulmonary myocardium
development" evidence=IEA] [GO:0003253 "cardiac neural crest cell
migration involved in outflow tract morphogenesis" evidence=IEA]
[GO:0003171 "atrioventricular valve development" evidence=IEA]
[GO:0002074 "extraocular skeletal muscle development" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0001569 "patterning of blood vessels"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=IEA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IEA] [GO:0001078 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in negative regulation of transcription"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0001764 GO:GO:0016055
GO:GO:0001078 GO:GO:0001701 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0030334 GO:GO:0007368 GO:GO:0001569
GO:GO:0007520 GO:GO:0001570 GO:GO:0035116 GO:GO:0031076
GO:GO:0021983 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GO:GO:0042476 GO:GO:0001105 GO:GO:0031490
GO:GO:0055015 GO:GO:0001191 GO:GO:0055009 GO:GO:0035993
GO:GO:0043388 GO:GO:0002074 GO:GO:0060460 GO:GO:0060412
GO:GO:0048557 GO:GO:0061031 GO:GO:0021855 GO:GO:0003253
GO:GO:0061325 GO:GO:0003171 GO:GO:0061072 GO:GO:2000288
GO:GO:0003350 GeneTree:ENSGT00700000104438 OMA:DMYPSYT
GO:GO:0060577 GO:GO:0021763 GO:GO:0060578 GO:GO:0035886
EMBL:CU463881 Ensembl:ENSSSCT00000009999 Uniprot:F1S139
Length = 326
Score = 128 (50.1 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 32/116 (27%), Positives = 61/116 (52%)
Query: 18 RSSESDLGKLKEDDYETKSGTETMEME-APSG--DD---QDPSQHPKRKRYHRH-TQRQI 70
RS +S +L+ S E E + + G +D +DPS+ +++R H T +Q+
Sbjct: 47 RSLDSSKHRLEVHTISDTSSPEAAEKDKSQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQL 106
Query: 71 QEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILK 126
QE+EA F+ +PD R+E++ L +V+ WF+N+R + + + + ++ K
Sbjct: 107 QELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCK 162
Score = 49 (22.3 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 18/68 (26%), Positives = 27/68 (39%)
Query: 430 SPEGRKSMLKLAERMVTSFCTGVGASTAHAWTTLSATGSDDVR--VMTRKSMDDPGRPPG 487
SP S + ++ MV S TGV S+ ++ L+ S + V T P PP
Sbjct: 221 SPPNSISSMSMSSSMVPSAVTGVPGSSLNSLNNLNNLSSPSLNSAVPTPACPYAPPTPPY 280
Query: 488 IVLSAATS 495
+ S
Sbjct: 281 VYRDTCNS 288
>RGD|1564332 [details] [associations]
symbol:Rhox11 "reproductive homeobox 11" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS50071 SMART:SM00389 RGD:1564332 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
OrthoDB:EOG4FFD33 GeneTree:ENSGT00530000063899 EMBL:DQ058658
IPI:IPI00358669 RefSeq:NP_001020044.1 UniGene:Rn.153915
Ensembl:ENSRNOT00000035449 GeneID:298346 KEGG:rno:298346
UCSC:RGD:1564332 CTD:194738 eggNOG:KOG0490 HOGENOM:HOG000136395
HOVERGEN:HBG067324 InParanoid:Q4TU72 NextBio:643503
Genevestigator:Q4TU72 Uniprot:Q4TU72
Length = 215
Score = 129 (50.5 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 36/112 (32%), Positives = 63/112 (56%)
Query: 23 DLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPH 82
D+ +++ ++E + ET + S +Q + P RK Y + T Q+ EM+A F+E +
Sbjct: 68 DMSNIQDTEHEPE---ETRNADETS--EQLLFRIP-RKPY-KFTPGQLWEMQAVFEETQY 120
Query: 83 PDDKQRKELSRELGLEPLQVKFWFQNKRTQM-KAQHERHENQILKAENQKLR 133
PD +RKEL+ + ++ +VK WF NKR ++ K Q E + +I+ +LR
Sbjct: 121 PDAFRRKELAELMNVDEQKVKDWFNNKRAKLRKIQREILKGKIITPTQDELR 172
>ZFIN|ZDB-GENE-030904-9 [details] [associations]
symbol:vax1 "ventral anterior homeobox 1"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0061386 "closure of optic fissure"
evidence=IMP] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] [GO:0090259 "regulation of retinal ganglion cell axon
guidance" evidence=IMP] [GO:0021554 "optic nerve development"
evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-030904-9 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0060041 GO:GO:0000976
GO:GO:0061386 eggNOG:NOG323848 GeneTree:ENSGT00680000099870
GO:GO:0021554 CTD:11023 HOGENOM:HOG000049217 HOVERGEN:HBG007558
KO:K09318 EMBL:AY185348 EMBL:BC065951 IPI:IPI00512062
RefSeq:NP_919391.2 UniGene:Dr.134046 ProteinModelPortal:Q801E0
STRING:Q801E0 Ensembl:ENSDART00000031490 GeneID:373870
KEGG:dre:373870 InParanoid:Q801E0 OrthoDB:EOG4QVCD6
NextBio:20813407 Bgee:Q801E0 GO:GO:0090259 Uniprot:Q801E0
Length = 317
Score = 132 (51.5 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 44/124 (35%), Positives = 61/124 (49%)
Query: 42 EMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 101
E+ P G D D PKR R T Q+ +E F+ C + ++R EL+R+L L Q
Sbjct: 80 EIILPKGLDLD---RPKRTRTS-FTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQ 135
Query: 102 VKFWFQNKRT-QMKAQHERHENQILKAENQK----LRA-ENNRYKEALG-NATCPNCGGP 154
VK WFQN+RT Q K Q + E + + +E LR E R G P+CG
Sbjct: 136 VKVWFQNRRTKQKKDQGKDSELRSVVSETAATCSVLRLLEQGRLLTPPGLPGLLPHCGS- 194
Query: 155 AALG 158
++LG
Sbjct: 195 SSLG 198
Score = 44 (20.5 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 279 SRAMTIEVLSTGVAGNYNGALQVMTAEFQVPSPLVP-TREN 318
S A I G+AG+ G LQ ++A + S P +R N
Sbjct: 266 SVASRISSTPLGMAGSLAGNLQELSARYLCSSAFEPYSRTN 306
>UNIPROTKB|F1NVB2 [details] [associations]
symbol:TLX3 "T-cell leukemia homeobox protein 3"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0002087 "regulation of respiratory gaseous
exchange by neurological system process" evidence=IEA] [GO:0007417
"central nervous system development" evidence=IEA] [GO:0007585
"respiratory gaseous exchange" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0048665
"neuron fate specification" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104454 EMBL:AADN02035942 IPI:IPI00814284
Ensembl:ENSGALT00000003427 OMA:LAFPIAR ArrayExpress:F1NVB2
Uniprot:F1NVB2
Length = 136
Score = 114 (45.2 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 35/115 (30%), Positives = 59/115 (51%)
Query: 57 PKRKRYHRHTQR-QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKA 115
PKRK+ R QI E+E F + +R L++ L + QVK WFQN+RT+ +
Sbjct: 9 PKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRR 68
Query: 116 QH-ERHENQILKAENQKLRAENNRYKEALGNATCPNCGGPAALGEMS-FDEQHLR 168
Q E E + +A L+ +++ ++++L + P+ P L S F Q+L+
Sbjct: 69 QTAEEREAERQQASRLMLQLQHDAFQKSLNESIQPD---PLCLHNSSLFALQNLQ 120
>UNIPROTKB|F1P4U9 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 IPI:IPI00576774 EMBL:AADN02020025
EMBL:AADN02020026 EMBL:AADN02020027 EMBL:AADN02020028
EMBL:AADN02020029 EMBL:AADN02020030 Ensembl:ENSGALT00000015083
ArrayExpress:F1P4U9 Uniprot:F1P4U9
Length = 148
Score = 114 (45.2 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 18 RSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFF 77
+SS +++G+ E D+ +S + +M P + R+ Y R Q E+E F
Sbjct: 21 KSSSANIGE--EPDHLNQSSSPA-QMFPWMRPQAAPGRRRGRQTYSRF---QTLELEKEF 74
Query: 78 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKLRAENN 137
P+ K+R E+S LGL QVK WFQN+R + K ++ + + K E ++ A+
Sbjct: 75 LFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPASKQEGKEGEAKKE 134
Query: 138 RY 139
+
Sbjct: 135 TH 136
>ZFIN|ZDB-GENE-990415-236 [details] [associations]
symbol:rx1 "retinal homeobox gene 1" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0010842 "retina layer formation" evidence=IMP]
[GO:0003407 "neural retina development" evidence=IMP] [GO:0060219
"camera-type eye photoreceptor cell differentiation"
evidence=IGI;IMP] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990415-236 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010842
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104256 GO:GO:0060219 HOVERGEN:HBG021349
KO:K09332 EMBL:CR936300 OMA:MVDDSCL EMBL:BC060890 IPI:IPI00481573
RefSeq:NP_571300.2 UniGene:Dr.75761 SMR:Q6P984 STRING:Q6P984
Ensembl:ENSDART00000106166 GeneID:30472 KEGG:dre:30472 CTD:30472
InParanoid:Q6P984 NextBio:20806865 Uniprot:Q6P984
Length = 330
Score = 134 (52.2 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 40/136 (29%), Positives = 69/136 (50%)
Query: 3 QPNTFESHHMFDMTRRSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRY 62
QP TF H DM + DLG L++ +E ++ S D D Q K+ R
Sbjct: 94 QP-TF---HDADMFSNKCDGDLGDLRK----------AIESDSKSPDSADGEQPKKKHRR 139
Query: 63 HR--HTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERH 120
+R T Q+ E+E F++ +PD R+EL+ ++ L ++V+ WFQN+R + + Q E+
Sbjct: 140 NRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQ-EKI 198
Query: 121 ENQILKAENQKLRAEN 136
+ +K + + + N
Sbjct: 199 DASTMKLHDSPMLSFN 214
>UNIPROTKB|D6RFI4 [details] [associations]
symbol:PITX2 "Pituitary homeobox 2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 EMBL:AC017068
HOGENOM:HOG000273886 HGNC:HGNC:9005 ChiTaRS:PITX2 IPI:IPI00968016
ProteinModelPortal:D6RFI4 SMR:D6RFI4 Ensembl:ENST00000511837
ArrayExpress:D6RFI4 Bgee:D6RFI4 Uniprot:D6RFI4
Length = 290
Score = 125 (49.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 23/77 (29%), Positives = 46/77 (59%)
Query: 51 QDPSQHPKRKRYHRH-TQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNK 109
+DPS+ +++R H T +Q+QE+EA F+ +PD R+E++ L +V+ WF+N+
Sbjct: 77 EDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNR 136
Query: 110 RTQMKAQHERHENQILK 126
R + + + + ++ K
Sbjct: 137 RAKWRKRERNQQAELCK 153
Score = 49 (22.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 18/68 (26%), Positives = 27/68 (39%)
Query: 430 SPEGRKSMLKLAERMVTSFCTGVGASTAHAWTTLSATGSDDVR--VMTRKSMDDPGRPPG 487
SP S + ++ MV S TGV S+ ++ L+ S + V T P PP
Sbjct: 212 SPPNSISSMSMSSSMVPSAVTGVPGSSLNSLNNLNNLSSPSLNSAVPTPACPYAPPTPPY 271
Query: 488 IVLSAATS 495
+ S
Sbjct: 272 VYRDTCNS 279
>ZFIN|ZDB-GENE-050114-2 [details] [associations]
symbol:lmx1bb "LIM homeobox transcription factor 1,
beta b" species:7955 "Danio rerio" [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0030917
"midbrain-hindbrain boundary development" evidence=IGI] [GO:0042472
"inner ear morphogenesis" evidence=IMP] [GO:0021592 "fourth
ventricle development" evidence=IGI] [GO:0060117 "auditory receptor
cell development" evidence=IMP] [GO:0032474 "otolith morphogenesis"
evidence=IMP] [GO:0048752 "semicircular canal morphogenesis"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0002072 "optic cup morphogenesis involved in camera-type eye
development" evidence=IGI] [GO:0061386 "closure of optic fissure"
evidence=IGI] [GO:0060041 "retina development in camera-type eye"
evidence=IGI] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-050114-2 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0060041 GO:GO:0032474
GO:GO:0048752 GO:GO:0030917 GO:GO:0060117 GO:GO:0061386
GO:GO:0021592 HOVERGEN:HBG052335 KO:K09371 EMBL:AY894989
IPI:IPI00631669 RefSeq:NP_001020338.2 UniGene:Dr.108678
ProteinModelPortal:Q4VJ29 STRING:Q4VJ29 GeneID:554360
KEGG:dre:554360 CTD:554360 InParanoid:Q4VJ29 NextBio:20880753
Uniprot:Q4VJ29
Length = 375
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 45/139 (32%), Positives = 72/139 (51%)
Query: 21 ESDL-GKLKEDDYET-KSGTETMEMEAPSG-------DD-QDPSQHPKRKRYHRHTQRQI 70
E DL G + DD ++ KS E ++++ G DD +DP + PKR R TQ++
Sbjct: 149 EKDLLGSVSPDDSDSEKSEDEELDIKPEKGSGGTGKGDDGKDP-RRPKRPRTILTTQQR- 206
Query: 71 QEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQ 130
+ +A F+ P K R+ L+ E GL V+ WFQN+R +MK R + Q + +Q
Sbjct: 207 RAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRQQQQQEQQNSQ 266
Query: 131 KLRAE--NNRYKEALGNAT 147
+L E +NR + + + T
Sbjct: 267 RLGQEVMSNRMEGMMNSYT 285
>UNIPROTKB|O75364 [details] [associations]
symbol:PITX3 "Pituitary homeobox 3" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0048666 "neuron development" evidence=IEA] [GO:0070306 "lens
fiber cell differentiation" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0071542 "dopaminergic neuron
differentiation" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0030901 "midbrain
development" evidence=ISS] [GO:0002088 "lens development in
camera-type eye" evidence=ISS] [GO:0002089 "lens morphogenesis in
camera-type eye" evidence=ISS] [GO:0009887 "organ morphogenesis"
evidence=TAS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR016233 InterPro:IPR017970 Pfam:PF00046
PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 GO:GO:0071542 GO:GO:0043565
GO:GO:0007626 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0048666 GO:GO:0030901 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 Orphanet:98993 GO:GO:0002089
MIM:604219 GO:GO:0070306 EMBL:AL160011 MIM:107250 Orphanet:88632
eggNOG:NOG249113 HOGENOM:HOG000273886 HOVERGEN:HBG068770 CTD:5309
KO:K09357 EMBL:AF041339 EMBL:BC011642 IPI:IPI00025313
RefSeq:NP_005020.1 UniGene:Hs.137568 ProteinModelPortal:O75364
SMR:O75364 STRING:O75364 PhosphoSite:O75364 PRIDE:O75364 DNASU:5309
Ensembl:ENST00000370002 Ensembl:ENST00000539804 GeneID:5309
KEGG:hsa:5309 UCSC:uc001kuu.1 GeneCards:GC10M103979 HGNC:HGNC:9006
HPA:HPA044639 MIM:602669 MIM:610623 neXtProt:NX_O75364 Orphanet:162
PharmGKB:PA33340 InParanoid:O75364 OMA:LCKGGFA OrthoDB:EOG45QHG0
PhylomeDB:O75364 GenomeRNAi:5309 NextBio:20526 Bgee:O75364
CleanEx:HS_PITX3 CleanEx:HS_PTX3 Genevestigator:O75364
GermOnline:ENSG00000107859 Uniprot:O75364
Length = 302
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 27/92 (29%), Positives = 49/92 (53%)
Query: 36 SGTETMEMEAPSGDDQDPSQHPKRKRYHRH-TQRQIQEMEAFFKECPHPDDKQRKELSRE 94
S +E P G +D S K++R H T +Q+QE+EA F+ +PD R+E++
Sbjct: 39 SDSEKASASLPGGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVW 98
Query: 95 LGLEPLQVKFWFQNKRTQMKAQHERHENQILK 126
L +V+ WF+N+R + + + + ++ K
Sbjct: 99 TNLTEARVRVWFKNRRAKWRKRERSQQAELCK 130
>MGI|MGI:1100498 [details] [associations]
symbol:Pitx3 "paired-like homeodomain transcription factor
3" species:10090 "Mus musculus" [GO:0002088 "lens development in
camera-type eye" evidence=IMP] [GO:0002089 "lens morphogenesis in
camera-type eye" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007626 "locomotory behavior"
evidence=IMP] [GO:0010468 "regulation of gene expression"
evidence=IDA] [GO:0030901 "midbrain development" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0048666 "neuron development" evidence=IMP]
[GO:0070306 "lens fiber cell differentiation" evidence=IMP]
[GO:0071542 "dopaminergic neuron differentiation" evidence=IDA;IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:1100498 GO:GO:0005634
GO:GO:0045893 GO:GO:0071542 GO:GO:0043565 GO:GO:0007626
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0048666 GO:GO:0030901 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0002089 GO:GO:0070306 eggNOG:NOG249113
HOGENOM:HOG000273886 HOVERGEN:HBG068770
GeneTree:ENSGT00700000104438 CTD:5309 KO:K09357 OMA:LCKGGFA
OrthoDB:EOG45QHG0 EMBL:AF005772 EMBL:BC120844 EMBL:BC137810
IPI:IPI00127700 RefSeq:NP_032878.1 UniGene:Mm.6255
ProteinModelPortal:O35160 SMR:O35160 STRING:O35160
PhosphoSite:O35160 PRIDE:O35160 Ensembl:ENSMUST00000026259
GeneID:18742 KEGG:mmu:18742 UCSC:uc008hsl.1 InParanoid:Q0VB03
ChiTaRS:PITX3 NextBio:294893 Bgee:O35160 CleanEx:MM_PITX3
Genevestigator:O35160 GermOnline:ENSMUSG00000025229 Uniprot:O35160
Length = 302
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 27/92 (29%), Positives = 49/92 (53%)
Query: 36 SGTETMEMEAPSGDDQDPSQHPKRKRYHRH-TQRQIQEMEAFFKECPHPDDKQRKELSRE 94
S +E P G +D S K++R H T +Q+QE+EA F+ +PD R+E++
Sbjct: 39 SDSEKASASLPGGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVW 98
Query: 95 LGLEPLQVKFWFQNKRTQMKAQHERHENQILK 126
L +V+ WF+N+R + + + + ++ K
Sbjct: 99 TNLTEARVRVWFKNRRAKWRKRERSQQAELCK 130
>RGD|3332 [details] [associations]
symbol:Pitx3 "paired-like homeodomain 3" species:10116 "Rattus
norvegicus" [GO:0002088 "lens development in camera-type eye"
evidence=ISO;ISS] [GO:0002089 "lens morphogenesis in camera-type eye"
evidence=ISO;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO;ISS] [GO:0007626 "locomotory behavior"
evidence=IEA;ISO] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0030901 "midbrain development" evidence=ISO;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0048666 "neuron development" evidence=IEA;ISO]
[GO:0070306 "lens fiber cell differentiation" evidence=IEA;ISO]
[GO:0071542 "dopaminergic neuron differentiation" evidence=ISO;ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:3332 GO:GO:0005634 GO:GO:0045893
GO:GO:0071542 GO:GO:0043565 GO:GO:0007626 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048666 GO:GO:0030901
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0002089
GO:GO:0070306 eggNOG:NOG249113 HOGENOM:HOG000273886
HOVERGEN:HBG068770 GeneTree:ENSGT00700000104438 CTD:5309 KO:K09357
OMA:LCKGGFA OrthoDB:EOG45QHG0 EMBL:AJ011005 IPI:IPI00197341
RefSeq:NP_062120.1 UniGene:Rn.22092 ProteinModelPortal:P81062
SMR:P81062 STRING:P81062 PhosphoSite:P81062
Ensembl:ENSRNOT00000026013 GeneID:29609 KEGG:rno:29609 UCSC:RGD:3332
InParanoid:P81062 NextBio:609786 Genevestigator:P81062
GermOnline:ENSRNOG00000019194 Uniprot:P81062
Length = 302
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 27/92 (29%), Positives = 49/92 (53%)
Query: 36 SGTETMEMEAPSGDDQDPSQHPKRKRYHRH-TQRQIQEMEAFFKECPHPDDKQRKELSRE 94
S +E P G +D S K++R H T +Q+QE+EA F+ +PD R+E++
Sbjct: 39 SDSEKASASLPGGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVW 98
Query: 95 LGLEPLQVKFWFQNKRTQMKAQHERHENQILK 126
L +V+ WF+N+R + + + + ++ K
Sbjct: 99 TNLTEARVRVWFKNRRAKWRKRERSQQAELCK 130
>UNIPROTKB|F1S4R4 [details] [associations]
symbol:LOC100739572 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0043010 "camera-type eye
development" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007406 "negative
regulation of neuroblast proliferation" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00680000099870 EMBL:CU462856
Ensembl:ENSSSCT00000011671 Uniprot:F1S4R4
Length = 253
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 30/73 (41%), Positives = 41/73 (56%)
Query: 42 EMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 101
E+ P G D D PKR R T Q+ +E F+ C + ++R EL+R+L L Q
Sbjct: 8 EIILPKGLDLD---RPKRTRTS-FTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQ 63
Query: 102 VKFWFQNKRTQMK 114
VK WFQN+RT+ K
Sbjct: 64 VKVWFQNRRTKQK 76
>UNIPROTKB|E2R5R2 [details] [associations]
symbol:PITX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR016233 InterPro:IPR017970 Pfam:PF00046
PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104438 CTD:5308 KO:K04686
OMA:DMYPSYT EMBL:AAEX03016824 RefSeq:XP_851370.1
ProteinModelPortal:E2R5R2 Ensembl:ENSCAFT00000018452 GeneID:487902
KEGG:cfa:487902 NextBio:20861384 Uniprot:E2R5R2
Length = 325
Score = 126 (49.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 32/116 (27%), Positives = 61/116 (52%)
Query: 18 RSSESDLGKLKEDDYETKSGTETMEME-APSG--DD---QDPSQHPKRKRYHRH-TQRQI 70
RS +S +L+ S E E + + G +D +DPS+ +++R H T +Q+
Sbjct: 46 RSLDSAKHRLEVHTISDTSSPEAAEKDKSQQGKNEDVGTEDPSKKKRQRRQRTHFTSQQL 105
Query: 71 QEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILK 126
QE+EA F+ +PD R+E++ L +V+ WF+N+R + + + + ++ K
Sbjct: 106 QELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCK 161
Score = 49 (22.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 18/68 (26%), Positives = 27/68 (39%)
Query: 430 SPEGRKSMLKLAERMVTSFCTGVGASTAHAWTTLSATGSDDVR--VMTRKSMDDPGRPPG 487
SP S + ++ MV S TGV S+ ++ L+ S + V T P PP
Sbjct: 220 SPPNSISSMSMSSSMVPSAVTGVPGSSLNSLNNLNNLSSPSLNSAVPTPACPYAPPTPPY 279
Query: 488 IVLSAATS 495
+ S
Sbjct: 280 VYRDTCNS 287
>UNIPROTKB|P97273 [details] [associations]
symbol:TITF1 "Thyroid transcription factor 1" species:10141
"Cavia porcellus" [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007411 GO:GO:0021766 GO:GO:0001764
GO:GO:0045893 GO:GO:0005654 GO:GO:0033327 GO:GO:0043565
GO:GO:0006644 GO:GO:0045944 GO:GO:0007626 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0003705 GO:GO:0000122 GO:GO:0030336 GO:GO:0044212
GO:GO:0009725 GO:GO:0060510 GO:GO:0021983 GO:GO:0007492
GO:GO:0021877 GO:GO:0048709 GO:GO:0021759 GO:GO:0021892
GO:GO:0030512 GO:GO:0060441 GO:GO:0010719 GO:GO:0021795
GO:GO:0030878 GO:GO:0060430 GO:GO:0021798 GO:GO:0060486
eggNOG:NOG328614 HOGENOM:HOG000231923 HOVERGEN:HBG006689
GO:GO:0031128 GO:GO:0042696 EMBL:U82718 ProteinModelPortal:P97273
SMR:P97273 STRING:P97273 InParanoid:P97273 Uniprot:P97273
Length = 112
Score = 112 (44.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 31/92 (33%), Positives = 47/92 (51%)
Query: 58 KRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQH 117
+R R +Q Q+ E+E FK+ + +R+ L+ + L P QVK WFQN R +MK Q
Sbjct: 1 RRNRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQA 60
Query: 118 ERHENQILKAENQKLRAENNRYKEALGNATCP 149
+ KA Q+L+ ++ G A CP
Sbjct: 61 KD------KAAQQQLQQDSGGGGGG-GGAGCP 85
>ZFIN|ZDB-GENE-990714-27 [details] [associations]
symbol:pitx2 "paired-like homeodomain transcription
factor 2" species:7955 "Danio rerio" [GO:0021501 "prechordal plate
formation" evidence=IGI] [GO:0060971 "embryonic heart tube
left/right pattern formation" evidence=IDA] [GO:0071907
"determination of digestive tract left/right asymmetry"
evidence=IDA] [GO:0048382 "mesendoderm development" evidence=IDA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043114
"regulation of vascular permeability" evidence=IGI] [GO:0061386
"closure of optic fissure" evidence=IMP] [GO:0048593 "camera-type
eye morphogenesis" evidence=IMP] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=IMP] [GO:0048384 "retinoic
acid receptor signaling pathway" evidence=IMP] [GO:0060325 "face
morphogenesis" evidence=IMP] [GO:0048596 "embryonic camera-type eye
morphogenesis" evidence=IMP] [GO:0048701 "embryonic cranial
skeleton morphogenesis" evidence=IMP] [GO:0007275 "multicellular
organismal development" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990714-27 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048384
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0060325
GO:GO:0048382 GO:GO:0071907 GO:GO:0048703 GO:GO:0060971
GO:GO:0021501 GO:GO:0061386 eggNOG:NOG249113 HOGENOM:HOG000273886
HOVERGEN:HBG068770 GeneTree:ENSGT00700000104438 CTD:5308 KO:K04686
EMBL:AF156905 EMBL:AF156906 EMBL:AF181681 EMBL:AF132446
EMBL:AF132447 EMBL:BC092922 IPI:IPI00486280 IPI:IPI00507463
RefSeq:NP_571050.1 UniGene:Dr.81292 ProteinModelPortal:Q9W5Z2
SMR:Q9W5Z2 STRING:Q9W5Z2 Ensembl:ENSDART00000052569
Ensembl:ENSDART00000148319 GeneID:30164 KEGG:dre:30164
InParanoid:Q568C4 OMA:DMYPSYT NextBio:20806634 Bgee:Q9W5Z2
Uniprot:Q9W5Z2
Length = 314
Score = 128 (50.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 29/96 (30%), Positives = 53/96 (55%)
Query: 36 SGTETMEMEAPSGDDQDPSQHP-KRKRYHR---H-TQRQIQEMEAFFKECPHPDDKQRKE 90
S E++E E ++D + P K+KR R H T +Q+QE+EA F+ +PD R+E
Sbjct: 55 SSPESVEKEKGQSKNEDSNDDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREE 114
Query: 91 LSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILK 126
++ L +V+ WF+N+R + + + + ++ K
Sbjct: 115 IAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCK 150
Score = 46 (21.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 17/68 (25%), Positives = 27/68 (39%)
Query: 430 SPEGRKSMLKLAERMVTSFCTGVGASTAHAWTTLSATGSDDVR--VMTRKSMDDPGRPPG 487
SP S + ++ MV S TGV S+ ++ L+ + + V T P PP
Sbjct: 209 SPPNSISSMSMSSSMVPSAVTGVPGSSLNSLNNLNNLSNPSLNSGVPTPACPYAPPTPPY 268
Query: 488 IVLSAATS 495
+ S
Sbjct: 269 VYRDTCNS 276
>ZFIN|ZDB-GENE-020905-5 [details] [associations]
symbol:prrx1a "paired related homeobox 1a"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-020905-5 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104279 HSSP:P06601
HOVERGEN:HBG021349 OrthoDB:EOG4RR6J8 eggNOG:NOG309174 EMBL:BX548024
EMBL:BC053228 IPI:IPI00493267 RefSeq:NP_999899.1 UniGene:Dr.32622
SMR:Q7T373 Ensembl:ENSDART00000041365 GeneID:406431 KEGG:dre:406431
CTD:406431 InParanoid:Q7T373 OMA:CANNTTA NextBio:20818028
Uniprot:Q7T373
Length = 245
Score = 129 (50.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 31/125 (24%), Positives = 60/125 (48%)
Query: 8 ESHHMFDMTRRSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQ 67
E+ M S + G+ + SG++T + E + ++ + +R+
Sbjct: 46 EAREMVGAQAEESAGEAGRSMLESPGLTSGSDTTQQENEQLNAEEKKKRKQRRNRTTFNS 105
Query: 68 RQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKA 127
Q+Q +E F+ +PD R++L+R + L +V+ WFQN+R A+ R+E +L +
Sbjct: 106 SQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRR----AKFRRNERAMLAS 161
Query: 128 ENQKL 132
+N L
Sbjct: 162 KNASL 166
>UNIPROTKB|E1BXV0 [details] [associations]
symbol:VAX1 "Ventral anterior homeobox 1" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0007406 "negative
regulation of neuroblast proliferation" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
[GO:0043010 "camera-type eye development" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0030154 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0000976 GO:GO:0031490
GeneTree:ENSGT00680000099870 EMBL:AADN02030950 EMBL:AADN02030951
EMBL:AADN02030952 IPI:IPI00821767 Ensembl:ENSGALT00000038881
OMA:FEKANIM Uniprot:E1BXV0
Length = 269
Score = 130 (50.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 30/73 (41%), Positives = 41/73 (56%)
Query: 42 EMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 101
E+ P G D D PKR R T Q+ +E F+ C + ++R EL+R+L L Q
Sbjct: 80 EIILPKGLDLD---RPKRTRTS-FTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQ 135
Query: 102 VKFWFQNKRTQMK 114
VK WFQN+RT+ K
Sbjct: 136 VKVWFQNRRTKQK 148
>UNIPROTKB|E1C121 [details] [associations]
symbol:PITX1 "Pituitary homeobox 1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 UniGene:Gga.962
CTD:5307 KO:K09356 GeneTree:ENSGT00700000104438 EMBL:AADN02028369
IPI:IPI00971376 RefSeq:NP_001161156.1 RefSeq:NP_001161157.1
RefSeq:NP_001161158.1 Ensembl:ENSGALT00000009427 GeneID:374201
KEGG:gga:374201 NextBio:20813705 Uniprot:E1C121
Length = 302
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 36/124 (29%), Positives = 61/124 (49%)
Query: 9 SHHM---FDMTRRSSESDL---GKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRY 62
SH M F + R S D + D E + E + G DP++ K++R
Sbjct: 22 SHDMASSFHLQRSSEPRDPIENSASESSDTEVPEKERSGEQKNEDGAADDPAKKKKQRRQ 81
Query: 63 HRH-TQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHE 121
H T +Q+QE+EA F+ +PD R+E++ L +V+ WF+N+R + + + ER++
Sbjct: 82 RTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWR-KRERNQ 140
Query: 122 NQIL 125
L
Sbjct: 141 QMDL 144
>UNIPROTKB|Q99697 [details] [associations]
symbol:PITX2 "Pituitary homeobox 2" species:9606 "Homo
sapiens" [GO:0000978 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding" evidence=IEA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001569 "patterning
of blood vessels" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0002074 "extraocular skeletal muscle development" evidence=IEA]
[GO:0003171 "atrioventricular valve development" evidence=IEA]
[GO:0003350 "pulmonary myocardium development" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007520 "myoblast fusion"
evidence=IEA] [GO:0008584 "male gonad development" evidence=IEA]
[GO:0008585 "female gonad development" evidence=IEA] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0016055 "Wnt
receptor signaling pathway" evidence=IEA] [GO:0021763 "subthalamic
nucleus development" evidence=IEA] [GO:0021855 "hypothalamus cell
migration" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0031076 "embryonic camera-type eye development"
evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
[GO:0033189 "response to vitamin A" evidence=IEA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035886
"vascular smooth muscle cell differentiation" evidence=IEA]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IEA] [GO:0055009 "atrial cardiac muscle tissue
morphogenesis" evidence=IEA] [GO:0055015 "ventricular cardiac
muscle cell development" evidence=IEA] [GO:0060412 "ventricular
septum morphogenesis" evidence=IEA] [GO:0060460 "left lung
morphogenesis" evidence=IEA] [GO:0060577 "pulmonary vein
morphogenesis" evidence=IEA] [GO:0060578 "superior vena cava
morphogenesis" evidence=IEA] [GO:0061031 "endodermal digestive
tract morphogenesis" evidence=IEA] [GO:2000288 "positive regulation
of myoblast proliferation" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IDA] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007368
"determination of left/right symmetry" evidence=ISS] [GO:0001102
"RNA polymerase II activating transcription factor binding"
evidence=IPI] [GO:0048536 "spleen development" evidence=ISS]
[GO:0070986 "left/right axis specification" evidence=ISS]
[GO:0043010 "camera-type eye development" evidence=IMP] [GO:0061072
"iris morphogenesis" evidence=IMP] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001105 "RNA polymerase
II transcription coactivator activity" evidence=IDA] [GO:0060127
"prolactin secreting cell differentiation" evidence=TAS]
[GO:0060126 "somatotropin secreting cell differentiation"
evidence=TAS] [GO:0042803 "protein homodimerization activity"
evidence=IPI] [GO:0042476 "odontogenesis" evidence=IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0043021 "ribonucleoprotein complex
binding" evidence=IC] [GO:0051219 "phosphoprotein binding"
evidence=IPI] [GO:0061325 "cell proliferation involved in outflow
tract morphogenesis" evidence=ISS] [GO:0035993 "deltoid tuberosity
development" evidence=IMP] [GO:0003253 "cardiac neural crest cell
migration involved in outflow tract morphogenesis" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001078 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IDA] [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IDA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IPI]
[GO:0035315 "hair cell differentiation" evidence=IC]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0001764 GO:GO:0016055 GO:GO:0001078 GO:GO:0001701
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0000122 GO:GO:0030334 GO:GO:0000981
GO:GO:0007368 GO:GO:0001569 GO:GO:0007520 GO:GO:0048536
EMBL:CH471057 GO:GO:0001570 GO:GO:0035116 GO:GO:0070986
GO:GO:0031076 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GO:GO:0042476 GO:GO:0001105 GO:GO:0043021
GO:GO:0031490 GO:GO:0055015 GO:GO:0001191 GO:GO:0055009
GO:GO:0035993 GO:GO:0043388 GO:GO:0002074 GO:GO:0060460
GO:GO:0060412 MIM:604229 Orphanet:708 GO:GO:0035315 GO:GO:0048557
GO:GO:0061031 GO:GO:0021855 Orphanet:98978 Orphanet:782
Orphanet:91483 GO:GO:0003253 GO:GO:0061325 GO:GO:0003171
GO:GO:0061072 GO:GO:2000288 GO:GO:0003350 eggNOG:NOG249113
HOVERGEN:HBG068770 CTD:5308 KO:K04686 OMA:DMYPSYT EMBL:U69961
EMBL:AF048720 EMBL:AF048721 EMBL:AF048722 EMBL:AF238048
EMBL:AK127829 EMBL:AK313987 EMBL:BC013998 EMBL:BC106010
IPI:IPI00017093 IPI:IPI00220801 IPI:IPI00220802 RefSeq:NP_000316.2
RefSeq:NP_001191326.1 RefSeq:NP_001191327.1 RefSeq:NP_001191328.1
RefSeq:NP_700475.1 RefSeq:NP_700476.1 UniGene:Hs.643588
UniGene:Hs.738484 PDB:2L7F PDB:2L7M PDB:2LKX PDBsum:2L7F
PDBsum:2L7M PDBsum:2LKX ProteinModelPortal:Q99697 SMR:Q99697
IntAct:Q99697 STRING:Q99697 DMDM:6174907 PRIDE:Q99697 DNASU:5308
Ensembl:ENST00000306732 Ensembl:ENST00000354925
Ensembl:ENST00000355080 Ensembl:ENST00000394598 GeneID:5308
KEGG:hsa:5308 UCSC:uc003iac.3 UCSC:uc003iad.3 UCSC:uc003iae.3
GeneCards:GC04M111538 HGNC:HGNC:9005 MIM:137600 MIM:180500
MIM:180550 MIM:601542 neXtProt:NX_Q99697 Orphanet:91481
PharmGKB:PA33339 OrthoDB:EOG4W9J4N ChiTaRS:PITX2
EvolutionaryTrace:Q99697 GenomeRNAi:5308 NextBio:20518
ArrayExpress:Q99697 Bgee:Q99697 CleanEx:HS_PITX2
Genevestigator:Q99697 GermOnline:ENSG00000164093 GO:GO:0060127
GO:GO:0060577 GO:GO:0060126 GO:GO:0021763 GO:GO:0060578
GO:GO:0035886 Uniprot:Q99697
Length = 317
Score = 125 (49.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 23/77 (29%), Positives = 46/77 (59%)
Query: 51 QDPSQHPKRKRYHRH-TQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNK 109
+DPS+ +++R H T +Q+QE+EA F+ +PD R+E++ L +V+ WF+N+
Sbjct: 77 EDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNR 136
Query: 110 RTQMKAQHERHENQILK 126
R + + + + ++ K
Sbjct: 137 RAKWRKRERNQQAELCK 153
Score = 49 (22.3 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 18/68 (26%), Positives = 27/68 (39%)
Query: 430 SPEGRKSMLKLAERMVTSFCTGVGASTAHAWTTLSATGSDDVR--VMTRKSMDDPGRPPG 487
SP S + ++ MV S TGV S+ ++ L+ S + V T P PP
Sbjct: 212 SPPNSISSMSMSSSMVPSAVTGVPGSSLNSLNNLNNLSSPSLNSAVPTPACPYAPPTPPY 271
Query: 488 IVLSAATS 495
+ S
Sbjct: 272 VYRDTCNS 279
>MGI|MGI:109340 [details] [associations]
symbol:Pitx2 "paired-like homeodomain transcription factor 2"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=ISO] [GO:0000978 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding" evidence=ISO]
[GO:0000981 "sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IDA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=ISO] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=ISO] [GO:0001085 "RNA
polymerase II transcription factor binding" evidence=ISO]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=ISO] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISO] [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=ISO] [GO:0001569
"patterning of blood vessels" evidence=IMP] [GO:0001570
"vasculogenesis" evidence=IMP] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0002074 "extraocular skeletal muscle development"
evidence=IMP] [GO:0003171 "atrioventricular valve development"
evidence=IMP] [GO:0003253 "cardiac neural crest cell migration
involved in outflow tract morphogenesis" evidence=IMP] [GO:0003350
"pulmonary myocardium development" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IGI] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007368 "determination of left/right
symmetry" evidence=IMP] [GO:0007507 "heart development"
evidence=IGI;IMP] [GO:0007519 "skeletal muscle tissue development"
evidence=IMP] [GO:0007520 "myoblast fusion" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0009653 "anatomical structure morphogenesis" evidence=IMP]
[GO:0009887 "organ morphogenesis" evidence=IMP] [GO:0016055 "Wnt
receptor signaling pathway" evidence=IDA] [GO:0021763 "subthalamic
nucleus development" evidence=IMP] [GO:0021855 "hypothalamus cell
migration" evidence=IMP] [GO:0021983 "pituitary gland development"
evidence=IMP] [GO:0030324 "lung development" evidence=IMP]
[GO:0030334 "regulation of cell migration" evidence=IMP]
[GO:0031076 "embryonic camera-type eye development" evidence=IMP]
[GO:0031490 "chromatin DNA binding" evidence=IDA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IGI] [GO:0035886
"vascular smooth muscle cell differentiation" evidence=IMP]
[GO:0035993 "deltoid tuberosity development" evidence=ISO;IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0042476 "odontogenesis" evidence=ISO;IMP] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043010 "camera-type
eye development" evidence=ISO] [GO:0043388 "positive regulation of
DNA binding" evidence=IDA] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IDA] [GO:0048536 "spleen development" evidence=IMP]
[GO:0048557 "embryonic digestive tract morphogenesis" evidence=IMP]
[GO:0048738 "cardiac muscle tissue development" evidence=IMP]
[GO:0051219 "phosphoprotein binding" evidence=ISO] [GO:0055007
"cardiac muscle cell differentiation" evidence=IMP] [GO:0055009
"atrial cardiac muscle tissue morphogenesis" evidence=IMP]
[GO:0055015 "ventricular cardiac muscle cell development"
evidence=IMP] [GO:0055123 "digestive system development"
evidence=IMP] [GO:0060412 "ventricular septum morphogenesis"
evidence=IMP] [GO:0060460 "left lung morphogenesis" evidence=IMP]
[GO:0060577 "pulmonary vein morphogenesis" evidence=IMP]
[GO:0060578 "superior vena cava morphogenesis" evidence=IMP]
[GO:0061031 "endodermal digestive tract morphogenesis"
evidence=IMP] [GO:0061072 "iris morphogenesis" evidence=ISO]
[GO:0061325 "cell proliferation involved in outflow tract
morphogenesis" evidence=IMP] [GO:0070986 "left/right axis
specification" evidence=IMP] [GO:2000288 "positive regulation of
myoblast proliferation" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:109340 GO:GO:0005634 GO:GO:0005737
GO:GO:0001764 GO:GO:0016055 GO:GO:0001078 GO:GO:0043565
GO:GO:0001701 GO:GO:0045944 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0030334 GO:GO:0000981 GO:GO:0007368
GO:GO:0001569 GO:GO:0007520 GO:GO:0048536 GO:GO:0001570
GO:GO:0035116 GO:GO:0070986 GO:GO:0031076 GO:GO:0021983
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GO:GO:0042476 GO:GO:0001105 GO:GO:0031490 GO:GO:0055015
GO:GO:0001191 GO:GO:0055009 GO:GO:0035993 GO:GO:0043388
GO:GO:0002074 GO:GO:0060460 GO:GO:0060412 GO:GO:0048557
GO:GO:0061031 GO:GO:0021855 GO:GO:0003253 GO:GO:0061325
GO:GO:0003171 GO:GO:0061072 GO:GO:2000288 GO:GO:0003350
eggNOG:NOG249113 HOVERGEN:HBG068770 GeneTree:ENSGT00700000104438
CTD:5308 KO:K04686 OMA:DMYPSYT OrthoDB:EOG4W9J4N GO:GO:0060577
GO:GO:0021763 GO:GO:0060578 GO:GO:0035886 EMBL:U80036 EMBL:U80010
EMBL:U80011 EMBL:AB006320 EMBL:AB006321 EMBL:AF048723 EMBL:AF048724
EMBL:AJ243597 EMBL:AF201091 EMBL:U70132 IPI:IPI00125578
IPI:IPI00230555 IPI:IPI00230556 IPI:IPI00885427 IPI:IPI00885862
RefSeq:NP_001035967.1 RefSeq:NP_001035969.1 RefSeq:NP_035228.2
UniGene:Mm.246804 ProteinModelPortal:P97474 SMR:P97474
IntAct:P97474 STRING:P97474 PRIDE:P97474 Ensembl:ENSMUST00000042587
Ensembl:ENSMUST00000106382 Ensembl:ENSMUST00000172645
Ensembl:ENSMUST00000174661 GeneID:18741 KEGG:mmu:18741
UCSC:uc008rhu.1 UCSC:uc008rhv.1 NextBio:294885 Bgee:P97474
CleanEx:MM_PITX2 Genevestigator:P97474
GermOnline:ENSMUSG00000028023 Uniprot:P97474
Length = 317
Score = 125 (49.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 23/77 (29%), Positives = 46/77 (59%)
Query: 51 QDPSQHPKRKRYHRH-TQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNK 109
+DPS+ +++R H T +Q+QE+EA F+ +PD R+E++ L +V+ WF+N+
Sbjct: 77 EDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNR 136
Query: 110 RTQMKAQHERHENQILK 126
R + + + + ++ K
Sbjct: 137 RAKWRKRERNQQAELCK 153
Score = 49 (22.3 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 18/68 (26%), Positives = 27/68 (39%)
Query: 430 SPEGRKSMLKLAERMVTSFCTGVGASTAHAWTTLSATGSDDVR--VMTRKSMDDPGRPPG 487
SP S + ++ MV S TGV S+ ++ L+ S + V T P PP
Sbjct: 212 SPPNSISSMSMSSSMVPSAVTGVPGSSLNSLNNLNNLSSPSLNSAVPTPACPYAPPTPPY 271
Query: 488 IVLSAATS 495
+ S
Sbjct: 272 VYRDTCNS 279
>UNIPROTKB|F1PUR9 [details] [associations]
symbol:DUXA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 OMA:PGYATKQ
EMBL:AAEX03000701 Ensembl:ENSCAFT00000003829
GeneTree:ENSGT00610000085975 Uniprot:F1PUR9
Length = 163
Score = 117 (46.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 30/115 (26%), Positives = 57/115 (49%)
Query: 5 NTFESHHMFDMTRRSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHR 64
N ES R + K E D + +S + + + P +++ PS+ +R R
Sbjct: 53 NAEESRIQVWFQNRRARHQCQKKSEPDEDLES---SQDQDYP--EEEIPSREDRRCRTS- 106
Query: 65 HTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHER 119
+T Q+ + F P+P R++L++E+G+ +V+ WFQN+R++ Q +R
Sbjct: 107 YTSSQLHTLIEAFTNNPYPGIDTREQLAKEIGIPESRVQIWFQNRRSRFHVQRKR 161
>UNIPROTKB|F1N4L6 [details] [associations]
symbol:ARGFX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 OMA:MQDTQWE
GeneTree:ENSGT00700000104273 EMBL:DAAA02001583 IPI:IPI00693997
Ensembl:ENSBTAT00000002930 Uniprot:F1N4L6
Length = 236
Score = 128 (50.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 31/82 (37%), Positives = 44/82 (53%)
Query: 58 KRKRYHRHTQ---RQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 114
K K+ H T Q +E+EA F PD ++EL+ +L L VK WF+N+R +MK
Sbjct: 8 KWKKSHERTSFTHTQYKELEALFSCNMFPDKNLQRELALKLNLPESTVKIWFRNRRFKMK 67
Query: 115 AQHERHENQILKAENQKLRAEN 136
Q E Q LK +Q L A++
Sbjct: 68 KQQREQEQQSLKPPSQVLPAKD 89
>RGD|3331 [details] [associations]
symbol:Pitx2 "paired-like homeodomain 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=ISO]
[GO:0000978 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding" evidence=IDA] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription factor
activity" evidence=ISO] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IDA] [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=ISO]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=ISO] [GO:0001102 "RNA polymerase II activating transcription
factor binding" evidence=ISO] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=ISO] [GO:0001191 "RNA
polymerase II transcription factor binding transcription factor
activity involved in negative regulation of transcription"
evidence=ISO] [GO:0001569 "patterning of blood vessels" evidence=ISO]
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0001701 "in utero
embryonic development" evidence=ISO] [GO:0001764 "neuron migration"
evidence=ISO] [GO:0002074 "extraocular skeletal muscle development"
evidence=ISO] [GO:0003171 "atrioventricular valve development"
evidence=ISO] [GO:0003253 "cardiac neural crest cell migration
involved in outflow tract morphogenesis" evidence=ISO] [GO:0003350
"pulmonary myocardium development" evidence=ISO] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007368 "determination of left/right
symmetry" evidence=ISO] [GO:0007420 "brain development" evidence=IEP]
[GO:0007507 "heart development" evidence=ISO] [GO:0007519 "skeletal
muscle tissue development" evidence=ISO] [GO:0007520 "myoblast
fusion" evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008584 "male gonad development" evidence=IEP]
[GO:0008585 "female gonad development" evidence=IEP] [GO:0009653
"anatomical structure morphogenesis" evidence=ISO] [GO:0009725
"response to hormone stimulus" evidence=IEP] [GO:0009887 "organ
morphogenesis" evidence=ISO] [GO:0016055 "Wnt receptor signaling
pathway" evidence=ISO] [GO:0021763 "subthalamic nucleus development"
evidence=ISO] [GO:0021855 "hypothalamus cell migration" evidence=ISO]
[GO:0021983 "pituitary gland development" evidence=ISO] [GO:0030182
"neuron differentiation" evidence=IEP] [GO:0030324 "lung development"
evidence=ISO] [GO:0030334 "regulation of cell migration"
evidence=ISO] [GO:0031076 "embryonic camera-type eye development"
evidence=ISO] [GO:0031490 "chromatin DNA binding" evidence=ISO]
[GO:0033189 "response to vitamin A" evidence=IEP] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=ISO] [GO:0035886
"vascular smooth muscle cell differentiation" evidence=ISO]
[GO:0035993 "deltoid tuberosity development" evidence=ISO]
[GO:0042127 "regulation of cell proliferation" evidence=ISO]
[GO:0042475 "odontogenesis of dentin-containing tooth" evidence=IEP]
[GO:0042476 "odontogenesis" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043010 "camera-type eye
development" evidence=ISO] [GO:0043388 "positive regulation of DNA
binding" evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0048536 "spleen development" evidence=ISO] [GO:0048557 "embryonic
digestive tract morphogenesis" evidence=ISO] [GO:0048738 "cardiac
muscle tissue development" evidence=ISO] [GO:0051219 "phosphoprotein
binding" evidence=ISO] [GO:0055007 "cardiac muscle cell
differentiation" evidence=ISO] [GO:0055009 "atrial cardiac muscle
tissue morphogenesis" evidence=ISO] [GO:0055015 "ventricular cardiac
muscle cell development" evidence=ISO] [GO:0055123 "digestive system
development" evidence=ISO] [GO:0060412 "ventricular septum
morphogenesis" evidence=ISO] [GO:0060460 "left lung morphogenesis"
evidence=ISO] [GO:0060577 "pulmonary vein morphogenesis"
evidence=ISO] [GO:0060578 "superior vena cava morphogenesis"
evidence=ISO] [GO:0061031 "endodermal digestive tract morphogenesis"
evidence=ISO] [GO:0061072 "iris morphogenesis" evidence=ISO]
[GO:0061325 "cell proliferation involved in outflow tract
morphogenesis" evidence=ISO] [GO:0070986 "left/right axis
specification" evidence=ISO] [GO:2000288 "positive regulation of
myoblast proliferation" evidence=ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970 Pfam:PF00046
PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
RGD:3331 GO:GO:0005634 GO:GO:0005737 GO:GO:0001764 GO:GO:0007420
GO:GO:0016055 GO:GO:0030182 GO:GO:0008585 GO:GO:0001078 GO:GO:0001701
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0008584
GO:GO:0000978 GO:GO:0001077 GO:GO:0030334 GO:GO:0009725 GO:GO:0007368
GO:GO:0001569 GO:GO:0007520 GO:GO:0001570 GO:GO:0042475 GO:GO:0035116
GO:GO:0031076 GO:GO:0021983 GO:GO:0033189 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0001105 GO:GO:0031490
GO:GO:0055015 GO:GO:0001191 GO:GO:0055009 GO:GO:0035993 GO:GO:0043388
GO:GO:0002074 GO:GO:0060460 GO:GO:0060412 GO:GO:0048557 GO:GO:0061031
GO:GO:0021855 GO:GO:0003253 GO:GO:0061325 GO:GO:0003171 GO:GO:0061072
GO:GO:2000288 GO:GO:0003350 eggNOG:NOG249113 HOGENOM:HOG000273886
HOVERGEN:HBG068770 GeneTree:ENSGT00700000104438 CTD:5308 KO:K04686
OMA:DMYPSYT GO:GO:0060577 GO:GO:0021763 GO:GO:0060578 GO:GO:0035886
EMBL:AF039832 EMBL:AJ222971 EMBL:AJ222972 IPI:IPI00206778
IPI:IPI00231533 RefSeq:NP_001035970.1 RefSeq:NP_062207.1
UniGene:Rn.17591 ProteinModelPortal:Q9R0W1 SMR:Q9R0W1 STRING:Q9R0W1
PRIDE:Q9R0W1 Ensembl:ENSRNOT00000014368 Ensembl:ENSRNOT00000044232
GeneID:54284 KEGG:rno:54284 UCSC:RGD:3331 InParanoid:Q9R0W1
NextBio:610866 ArrayExpress:Q9R0W1 Genevestigator:Q9R0W1
GermOnline:ENSRNOG00000010681 Uniprot:Q9R0W1
Length = 324
Score = 125 (49.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 23/77 (29%), Positives = 46/77 (59%)
Query: 51 QDPSQHPKRKRYHRH-TQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNK 109
+DPS+ +++R H T +Q+QE+EA F+ +PD R+E++ L +V+ WF+N+
Sbjct: 84 EDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNR 143
Query: 110 RTQMKAQHERHENQILK 126
R + + + + ++ K
Sbjct: 144 RAKWRKRERNQQAELCK 160
Score = 49 (22.3 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 18/68 (26%), Positives = 27/68 (39%)
Query: 430 SPEGRKSMLKLAERMVTSFCTGVGASTAHAWTTLSATGSDDVR--VMTRKSMDDPGRPPG 487
SP S + ++ MV S TGV S+ ++ L+ S + V T P PP
Sbjct: 219 SPPNSISSMSMSSSMVPSAVTGVPGSSLNSLNNLNNLSSPSLNSAVPTPACPYAPPTPPY 278
Query: 488 IVLSAATS 495
+ S
Sbjct: 279 VYRDTCNS 286
>UNIPROTKB|A5D7J4 [details] [associations]
symbol:PITX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003350 "pulmonary myocardium development"
evidence=IEA] [GO:0003253 "cardiac neural crest cell migration
involved in outflow tract morphogenesis" evidence=IEA] [GO:0003171
"atrioventricular valve development" evidence=IEA] [GO:0002074
"extraocular skeletal muscle development" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0001569 "patterning of blood vessels"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=IEA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IEA] [GO:0001078 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in negative regulation of transcription"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:2000288 "positive
regulation of myoblast proliferation" evidence=IEA] [GO:0070986
"left/right axis specification" evidence=IEA] [GO:0061325 "cell
proliferation involved in outflow tract morphogenesis"
evidence=IEA] [GO:0061072 "iris morphogenesis" evidence=IEA]
[GO:0061031 "endodermal digestive tract morphogenesis"
evidence=IEA] [GO:0060578 "superior vena cava morphogenesis"
evidence=IEA] [GO:0060577 "pulmonary vein morphogenesis"
evidence=IEA] [GO:0060460 "left lung morphogenesis" evidence=IEA]
[GO:0060412 "ventricular septum morphogenesis" evidence=IEA]
[GO:0055015 "ventricular cardiac muscle cell development"
evidence=IEA] [GO:0055009 "atrial cardiac muscle tissue
morphogenesis" evidence=IEA] [GO:0051219 "phosphoprotein binding"
evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042476 "odontogenesis" evidence=IEA] [GO:0035993 "deltoid
tuberosity development" evidence=IEA] [GO:0035886 "vascular smooth
muscle cell differentiation" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0031490 "chromatin DNA
binding" evidence=IEA] [GO:0031076 "embryonic camera-type eye
development" evidence=IEA] [GO:0030334 "regulation of cell
migration" evidence=IEA] [GO:0021983 "pituitary gland development"
evidence=IEA] [GO:0021855 "hypothalamus cell migration"
evidence=IEA] [GO:0021763 "subthalamic nucleus development"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0007520 "myoblast fusion" evidence=IEA]
[GO:0007368 "determination of left/right symmetry" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR016233 InterPro:IPR017970 Pfam:PF00046
PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005737 GO:GO:0001764 GO:GO:0016055 GO:GO:0001078
GO:GO:0001701 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0030334 GO:GO:0007368 GO:GO:0001569 GO:GO:0007520
GO:GO:0001570 GO:GO:0035116 GO:GO:0031076 GO:GO:0021983
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GO:GO:0042476 GO:GO:0001105 GO:GO:0031490 GO:GO:0055015
GO:GO:0001191 GO:GO:0055009 GO:GO:0035993 GO:GO:0043388
GO:GO:0002074 GO:GO:0060460 GO:GO:0060412 GO:GO:0048557
GO:GO:0061031 GO:GO:0021855 GO:GO:0003253 GO:GO:0061325
GO:GO:0003171 GO:GO:0061072 GO:GO:2000288 GO:GO:0003350
eggNOG:NOG249113 HOGENOM:HOG000273886 HOVERGEN:HBG068770
GeneTree:ENSGT00700000104438 CTD:5308 KO:K04686 OMA:DMYPSYT
OrthoDB:EOG4W9J4N GO:GO:0060577 GO:GO:0021763 GO:GO:0060578
GO:GO:0035886 EMBL:DAAA02016521 EMBL:BC140579 IPI:IPI00700494
RefSeq:NP_001091460.1 UniGene:Bt.18496 SMR:A5D7J4 STRING:A5D7J4
Ensembl:ENSBTAT00000011939 GeneID:506721 KEGG:bta:506721
InParanoid:A5D7J4 NextBio:20867727 Uniprot:A5D7J4
Length = 325
Score = 125 (49.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 23/77 (29%), Positives = 46/77 (59%)
Query: 51 QDPSQHPKRKRYHRH-TQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNK 109
+DPS+ +++R H T +Q+QE+EA F+ +PD R+E++ L +V+ WF+N+
Sbjct: 85 EDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNR 144
Query: 110 RTQMKAQHERHENQILK 126
R + + + + ++ K
Sbjct: 145 RAKWRKRERNQQAELCK 161
Score = 49 (22.3 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 18/68 (26%), Positives = 27/68 (39%)
Query: 430 SPEGRKSMLKLAERMVTSFCTGVGASTAHAWTTLSATGSDDVR--VMTRKSMDDPGRPPG 487
SP S + ++ MV S TGV S+ ++ L+ S + V T P PP
Sbjct: 220 SPPNSISSMSMSSSMVPSAVTGVPGSSLNSLNNLNNLSSPSLNSAVPTPACPYAPPTPPY 279
Query: 488 IVLSAATS 495
+ S
Sbjct: 280 VYRDTCNS 287
>UNIPROTKB|F1P4U7 [details] [associations]
symbol:HOXD11 "Homeobox protein Hox-D11" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001759 "organ induction" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0010720 "positive regulation of cell development"
evidence=IEA] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0048589 "developmental growth"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0032332 GO:GO:0048589 GO:GO:0001759
GO:GO:0010720 GeneTree:ENSGT00700000104263 IPI:IPI00583692
EMBL:AADN02020032 Ensembl:ENSGALT00000015085 Uniprot:F1P4U7
Length = 109
Score = 111 (44.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 32/89 (35%), Positives = 49/89 (55%)
Query: 28 KEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHR--HTQRQIQEMEAFFKECPHPDD 85
+E T SG + EA + + + S P+R R R +T+ QI+E+E F + +
Sbjct: 6 QEKKVTTASGAASPPGEAVA-EKSNSSAVPQRSRKKRCPYTKYQIRELEREFFFNVYINK 64
Query: 86 KQRKELSRELGLEPLQVKFWFQNKRTQMK 114
++R +LSR L L QVK WFQN+R + K
Sbjct: 65 EKRLQLSRMLNLTDRQVKIWFQNRRMKEK 93
>FB|FBgn0010323 [details] [associations]
symbol:Gsc "Goosecoid" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IC;ISS;NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 EMBL:AE014134
GO:GO:0001078 GO:GO:0043565 Gene3D:1.10.10.60 SUPFAM:SSF46689
CTD:145258 eggNOG:NOG247162 KO:K09324 EMBL:X95420 EMBL:U52968
PIR:S70617 RefSeq:NP_476949.1 UniGene:Dm.4841
ProteinModelPortal:P54366 SMR:P54366 IntAct:P54366 MINT:MINT-314608
STRING:P54366 PRIDE:P54366 GeneID:33240 KEGG:dme:Dmel_CG2851
FlyBase:FBgn0010323 HOGENOM:HOG000276707 InParanoid:P54366
OrthoDB:EOG4RV17N GenomeRNAi:33240 NextBio:782613 Bgee:P54366
GermOnline:CG2851 Uniprot:P54366
Length = 419
Score = 133 (51.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 25/83 (30%), Positives = 51/83 (61%)
Query: 57 PKRKRYHR--HTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 114
PKRKR HR T+ Q++++EA F + +PD R++L+ ++ L+ +V+ WF+N+R + +
Sbjct: 283 PKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKWR 342
Query: 115 AQHERHENQILKAENQKLRAENN 137
Q + ++ K + ++ + N
Sbjct: 343 KQKREEQERLRKLQEEQCGSTTN 365
>ZFIN|ZDB-GENE-990415-108 [details] [associations]
symbol:hoxb8a "homeo box B8a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-108 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104332 EMBL:BX927395
IPI:IPI00993559 Ensembl:ENSDART00000123837 ArrayExpress:E7FB54
Bgee:E7FB54 Uniprot:E7FB54
Length = 246
Score = 128 (50.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 40/133 (30%), Positives = 65/133 (48%)
Query: 19 SSESDLGKLKEDDYETKS-GTETMEME-APSGDDQDPSQHPK---RKRYHRHTQRQIQ-- 71
+ ++DL + + T G ET E +PS P P+ +R R T + Q
Sbjct: 100 AQDADLVQYSDCKLATGGIGDETDNTEQSPSPTQLFPWMRPQVAAGRRRGRQTYSRYQTL 159
Query: 72 EMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQK 131
E+E F P+ K+R E+S LGL QVK WFQN+R + K ++ + + K+E ++
Sbjct: 160 ELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKSEQEQ 219
Query: 132 LRAENNRYKEALG 144
+ E ++A G
Sbjct: 220 IEKEKREKEQASG 232
>TAIR|locus:2144578 [details] [associations]
symbol:HB51 "homeobox 51" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009965 "leaf
morphogenesis" evidence=IMP] [GO:0010434 "bract formation"
evidence=IGI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IGI] [GO:0048510 "regulation of timing of
transition from vegetative to reproductive phase" evidence=IGI]
[GO:0010582 "floral meristem determinacy" evidence=IGI] [GO:0048443
"stamen development" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AB005235 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009965
GO:GO:0048510 GO:GO:0010582 GO:GO:0000976 HOGENOM:HOG000006025
EMBL:AL162506 IPI:IPI00533817 IPI:IPI01019585 PIR:T48406
RefSeq:NP_195999.2 UniGene:At.54712 ProteinModelPortal:Q9LZR0
SMR:Q9LZR0 GeneID:831723 KEGG:ath:AT5G03790 GeneFarm:3983
TAIR:At5g03790 eggNOG:KOG0483 InParanoid:Q9LZR0 OMA:AHPRTEN
ArrayExpress:Q9LZR0 Genevestigator:Q9LZR0 GermOnline:AT5G03790
GO:GO:0010434 Uniprot:Q9LZR0
Length = 235
Score = 127 (49.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 42/148 (28%), Positives = 67/148 (45%)
Query: 3 QPNTFESHHMFDMTRRSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRY 62
+ ++F S H F+ + S D +T E E + P+ + + +
Sbjct: 23 ESSSFNSLHSFNFDPYAGNS----YTPGDTQTGPVISVPESEKIMNAYRFPNNNNEMIKK 78
Query: 63 HRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKA-QHE--- 118
R T Q+ +E F+E D ++ +LSRELGL+P Q+ WFQN+R + KA Q E
Sbjct: 79 KRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQLY 138
Query: 119 ---RHENQILKAENQKLRAENNRYKEAL 143
R E ++ E Q L E + + L
Sbjct: 139 DSLRQEYDVVSREKQMLHDEVKKLRALL 166
>UNIPROTKB|P78337 [details] [associations]
symbol:PITX1 "Pituitary homeobox 1" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0014707 "branchiomeric skeletal
muscle development" evidence=IEA] [GO:0021983 "pituitary gland
development" evidence=IEA] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048625 "myoblast cell fate commitment" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IEA] [GO:0001501
"skeletal system development" evidence=TAS] [GO:0009653 "anatomical
structure morphogenesis" evidence=TAS] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR016233 InterPro:IPR017970 Pfam:PF00046
PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005737 GO:GO:0005730 EMBL:CH471062 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0001501 GO:GO:0051216
GO:GO:0035116 GO:GO:0021983 GO:GO:0009653 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000988 GO:GO:0048625
GO:GO:0014707 eggNOG:NOG249113 HOGENOM:HOG000273886
HOVERGEN:HBG068770 OrthoDB:EOG4R503Q EMBL:U70370 EMBL:AF009650
EMBL:AF009648 EMBL:AF009649 EMBL:AK290635 EMBL:AC004764
EMBL:AC008406 EMBL:BC009412 EMBL:BC003685 IPI:IPI00019182
RefSeq:NP_002644.4 UniGene:Hs.84136 ProteinModelPortal:P78337
SMR:P78337 IntAct:P78337 MINT:MINT-260914 STRING:P78337
PhosphoSite:P78337 DMDM:108935922 PaxDb:P78337 PeptideAtlas:P78337
PRIDE:P78337 DNASU:5307 Ensembl:ENST00000265340
Ensembl:ENST00000506438 GeneID:5307 KEGG:hsa:5307 UCSC:uc010jea.3
CTD:5307 GeneCards:GC05M134363 H-InvDB:HIX0005190 HGNC:HGNC:9004
HPA:HPA008743 MIM:119800 MIM:602149 neXtProt:NX_P78337
Orphanet:293144 Orphanet:293150 PharmGKB:PA33338 InParanoid:P78337
KO:K09356 OMA:CKNSYLP PhylomeDB:P78337 ChiTaRS:PITX1
GenomeRNAi:5307 NextBio:20514 ArrayExpress:P78337 Bgee:P78337
CleanEx:HS_PITX1 Genevestigator:P78337 GermOnline:ENSG00000069011
Uniprot:P78337
Length = 314
Score = 130 (50.8 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 32/104 (30%), Positives = 59/104 (56%)
Query: 19 SSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRH-TQRQIQEMEAFF 77
SS+++L + KE E K ++ G DP++ K++R H T +Q+QE+EA F
Sbjct: 50 SSDTELPE-KERGGEPKGPEDSGAGGTGCGGADDPAKKKKQRRQRTHFTSQQLQELEATF 108
Query: 78 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHE 121
+ +PD R+E++ L +V+ WF+N+R + + + ER++
Sbjct: 109 QRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWR-KRERNQ 151
>MGI|MGI:107374 [details] [associations]
symbol:Pitx1 "paired-like homeodomain transcription factor 1"
species:10090 "Mus musculus" [GO:0000988 "protein binding
transcription factor activity" evidence=IPI] [GO:0001501 "skeletal
system development" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0014707 "branchiomeric skeletal muscle development"
evidence=IMP] [GO:0021983 "pituitary gland development"
evidence=IMP] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IGI] [GO:0035137 "hindlimb morphogenesis"
evidence=IDA;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IDA] [GO:0048625
"myoblast cell fate commitment" evidence=IMP] [GO:0051216
"cartilage development" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:107374 GO:GO:0005737 GO:GO:0005730
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0051216
GO:GO:0035116 GO:GO:0021983 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0000988 GO:GO:0048625 GO:GO:0014707
eggNOG:NOG249113 HOGENOM:HOG000273886 HOVERGEN:HBG068770
OrthoDB:EOG4R503Q CTD:5307 KO:K09356 OMA:CKNSYLP EMBL:U54499
EMBL:U71206 EMBL:BC012696 EMBL:U70371 IPI:IPI00108083
RefSeq:NP_035227.1 UniGene:Mm.135195 ProteinModelPortal:P70314
SMR:P70314 STRING:P70314 PhosphoSite:P70314 PRIDE:P70314
Ensembl:ENSMUST00000021968 GeneID:18740 KEGG:mmu:18740
InParanoid:P70314 NextBio:294881 Bgee:P70314 CleanEx:MM_PITX1
Genevestigator:P70314 GermOnline:ENSMUSG00000021506 Uniprot:P70314
Length = 315
Score = 130 (50.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 34/105 (32%), Positives = 59/105 (56%)
Query: 19 SSESDLGKLKEDDYETKSGTETMEMEAPSGDD-QDPSQHPKRKRYHRH-TQRQIQEMEAF 76
SS++DL KE E K + A G +DP++ K++R H T +Q+QE+EA
Sbjct: 50 SSDADLPD-KERGGEAKGPEDGGAGSAGCGGGAEDPAKKKKQRRQRTHFTSQQLQELEAT 108
Query: 77 FKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHE 121
F+ +PD R+E++ L +V+ WF+N+R + + + ER++
Sbjct: 109 FQRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWR-KRERNQ 152
>RGD|1586239 [details] [associations]
symbol:LOC691272 "similar to reproductive homeobox on X
chromosome, 11" species:10116 "Rattus norvegicus" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071 SMART:SM00389
RGD:1586239 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00530000063899
IPI:IPI00387867 Ensembl:ENSRNOT00000064531 Uniprot:F1M6S5
Length = 96
Score = 110 (43.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 53 PSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 112
P + R Q Q+ E++ F+E +PD QRKEL++ + +E VK WF +R +
Sbjct: 7 PMKSDTRGNPQEPAQEQLLELDRVFEETQYPDALQRKELAKLINVEEYTVKIWFNKRRAK 66
Query: 113 MKAQHER 119
++ +H++
Sbjct: 67 IR-KHQK 72
>ZFIN|ZDB-GENE-030131-9033 [details] [associations]
symbol:prrx1b "paired related homeobox 1b"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0010628 "positive regulation of gene expression"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-030131-9033 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0010628 HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104279 HSSP:P10037
eggNOG:NOG267226 HOVERGEN:HBG021349 KO:K09329 OMA:WGSAAPY
EMBL:CU571309 EMBL:BC064671 IPI:IPI00499847 RefSeq:NP_956344.1
UniGene:Dr.76340 SMR:Q6P295 Ensembl:ENSDART00000061588
GeneID:337089 KEGG:dre:337089 CTD:337089 InParanoid:Q6P295
NextBio:20812053 Uniprot:Q6P295
Length = 245
Score = 127 (49.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 31/125 (24%), Positives = 60/125 (48%)
Query: 8 ESHHMFDMTRRSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQ 67
E+ M S + G+ + SG++T + E + ++ + +R+
Sbjct: 46 EAREMVGSQVDESVGETGRTMLESPGLTSGSDTTQQENEQLNSEEKKKRKQRRNRTTFNS 105
Query: 68 RQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKA 127
Q+Q +E F+ +PD R++L+R + L +V+ WFQN+R A+ R+E +L +
Sbjct: 106 SQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRR----AKFRRNERAMLAS 161
Query: 128 ENQKL 132
+N L
Sbjct: 162 KNASL 166
>UNIPROTKB|F1S4S0 [details] [associations]
symbol:LOC100739572 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0043010 "camera-type eye
development" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007406 "negative
regulation of neuroblast proliferation" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099870 KO:K09318 OMA:ASEDCNK EMBL:CU468444
RefSeq:XP_001927274.1 UniGene:Ssc.95758 Ensembl:ENSSSCT00000011667
GeneID:100157019 KEGG:ssc:100157019 Uniprot:F1S4S0
Length = 333
Score = 130 (50.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 30/73 (41%), Positives = 41/73 (56%)
Query: 42 EMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 101
E+ P G D D PKR R T Q+ +E F+ C + ++R EL+R+L L Q
Sbjct: 88 EIILPKGLDLD---RPKRTRTS-FTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQ 143
Query: 102 VKFWFQNKRTQMK 114
VK WFQN+RT+ K
Sbjct: 144 VKVWFQNRRTKQK 156
>UNIPROTKB|E2QUC0 [details] [associations]
symbol:VAX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0043010 "camera-type eye
development" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007406 "negative
regulation of neuroblast proliferation" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007411
GO:GO:0001764 GO:GO:0007420 GO:GO:0007406 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0043010
GO:GO:0060021 GO:GO:0000976 GO:GO:0031490
GeneTree:ENSGT00680000099870 CTD:11023 KO:K09318 OMA:ASEDCNK
EMBL:AAEX03015564 EMBL:AAEX03015565 RefSeq:XP_865035.1
Ensembl:ENSCAFT00000018920 GeneID:486906 KEGG:cfa:486906
NextBio:20860611 Uniprot:E2QUC0
Length = 334
Score = 130 (50.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 30/73 (41%), Positives = 41/73 (56%)
Query: 42 EMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 101
E+ P G D D PKR R T Q+ +E F+ C + ++R EL+R+L L Q
Sbjct: 88 EIILPKGLDLD---RPKRTRTS-FTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQ 143
Query: 102 VKFWFQNKRTQMK 114
VK WFQN+RT+ K
Sbjct: 144 VKVWFQNRRTKQK 156
>UNIPROTKB|Q5SQQ9 [details] [associations]
symbol:VAX1 "Ventral anterior homeobox 1" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0007406 "negative regulation of
neuroblast proliferation" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0043010
"camera-type eye development" evidence=IEA] [GO:0060021 "palate
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007411
GO:GO:0001764 GO:GO:0007420 GO:GO:0007406 EMBL:CH471066
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0043010 GO:GO:0060021 GO:GO:0000976
GO:GO:0031490 eggNOG:NOG323848 EMBL:AL731557 CTD:11023
HOGENOM:HOG000049217 HOVERGEN:HBG007558 KO:K09318 EMBL:AK127095
EMBL:BC101694 EMBL:BC101696 IPI:IPI00515064 IPI:IPI00749057
RefSeq:NP_001106175.1 RefSeq:NP_954582.1 UniGene:Hs.441536
ProteinModelPortal:Q5SQQ9 SMR:Q5SQQ9 STRING:Q5SQQ9
PhosphoSite:Q5SQQ9 DMDM:74743553 PRIDE:Q5SQQ9 DNASU:11023
Ensembl:ENST00000277905 Ensembl:ENST00000369206 GeneID:11023
KEGG:hsa:11023 UCSC:uc001ldb.1 UCSC:uc009xyx.3
GeneCards:GC10M118878 HGNC:HGNC:12660 HPA:HPA028946 MIM:604294
MIM:614402 neXtProt:NX_Q5SQQ9 PharmGKB:PA37283 InParanoid:Q5SQQ9
OMA:ASEDCNK GenomeRNAi:11023 NextBio:41888 Bgee:Q5SQQ9
CleanEx:HS_VAX1 Genevestigator:Q5SQQ9 Uniprot:Q5SQQ9
Length = 334
Score = 130 (50.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 30/73 (41%), Positives = 41/73 (56%)
Query: 42 EMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 101
E+ P G D D PKR R T Q+ +E F+ C + ++R EL+R+L L Q
Sbjct: 88 EIILPKGLDLD---RPKRTRTS-FTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQ 143
Query: 102 VKFWFQNKRTQMK 114
VK WFQN+RT+ K
Sbjct: 144 VKVWFQNRRTKQK 156
>RGD|621132 [details] [associations]
symbol:Vax1 "ventral anterior homeobox 1" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0007399 "nervous system development"
evidence=ISO] [GO:0007406 "negative regulation of neuroblast
proliferation" evidence=IEA;ISO] [GO:0007411 "axon guidance"
evidence=IEA;ISO] [GO:0007417 "central nervous system development"
evidence=ISO] [GO:0007420 "brain development" evidence=IEA;ISO]
[GO:0030154 "cell differentiation" evidence=ISO] [GO:0031490
"chromatin DNA binding" evidence=IEA;ISO] [GO:0035914 "skeletal
muscle cell differentiation" evidence=ISO] [GO:0043010 "camera-type
eye development" evidence=IEA;ISO] [GO:0060021 "palate development"
evidence=IEA;ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:621132
GO:GO:0005634 GO:GO:0007411 GO:GO:0001764 GO:GO:0007420
GO:GO:0007406 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0043010 GO:GO:0060021
GO:GO:0000976 GO:GO:0031490 eggNOG:NOG323848
GeneTree:ENSGT00680000099870 CTD:11023 HOGENOM:HOG000049217
HOVERGEN:HBG007558 KO:K09318 OMA:ASEDCNK OrthoDB:EOG4H9XN9
EMBL:AF113515 IPI:IPI00203938 RefSeq:NP_072158.1 UniGene:Rn.48764
ProteinModelPortal:Q9JM00 Ensembl:ENSRNOT00000011743 GeneID:64571
KEGG:rno:64571 InParanoid:Q9JM00 NextBio:613524 ArrayExpress:Q9JM00
Genevestigator:Q9JM00 GermOnline:ENSRNOG00000008824 Uniprot:Q9JM00
Length = 336
Score = 130 (50.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 30/73 (41%), Positives = 41/73 (56%)
Query: 42 EMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 101
E+ P G D D PKR R T Q+ +E F+ C + ++R EL+R+L L Q
Sbjct: 88 EIILPKGLDLD---RPKRTRTS-FTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQ 143
Query: 102 VKFWFQNKRTQMK 114
VK WFQN+RT+ K
Sbjct: 144 VKVWFQNRRTKQK 156
>UNIPROTKB|Q9JM00 [details] [associations]
symbol:Vax1 "Ventral anterior homeobox 1" species:10116
"Rattus norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:621132
GO:GO:0005634 GO:GO:0007411 GO:GO:0001764 GO:GO:0007420
GO:GO:0007406 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0043010 GO:GO:0060021
GO:GO:0000976 GO:GO:0031490 eggNOG:NOG323848
GeneTree:ENSGT00680000099870 CTD:11023 HOGENOM:HOG000049217
HOVERGEN:HBG007558 KO:K09318 OMA:ASEDCNK OrthoDB:EOG4H9XN9
EMBL:AF113515 IPI:IPI00203938 RefSeq:NP_072158.1 UniGene:Rn.48764
ProteinModelPortal:Q9JM00 Ensembl:ENSRNOT00000011743 GeneID:64571
KEGG:rno:64571 InParanoid:Q9JM00 NextBio:613524 ArrayExpress:Q9JM00
Genevestigator:Q9JM00 GermOnline:ENSRNOG00000008824 Uniprot:Q9JM00
Length = 336
Score = 130 (50.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 30/73 (41%), Positives = 41/73 (56%)
Query: 42 EMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 101
E+ P G D D PKR R T Q+ +E F+ C + ++R EL+R+L L Q
Sbjct: 88 EIILPKGLDLD---RPKRTRTS-FTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQ 143
Query: 102 VKFWFQNKRTQMK 114
VK WFQN+RT+ K
Sbjct: 144 VKVWFQNRRTKQK 156
>UNIPROTKB|F1PDJ1 [details] [associations]
symbol:LMX1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 CTD:4009 KO:K09371 OMA:GNAGMEG
EMBL:AAEX03018391 EMBL:AAEX03018392 RefSeq:XP_851352.2
Ensembl:ENSCAFT00000021142 GeneID:609061 KEGG:cfa:609061
Uniprot:F1PDJ1
Length = 382
Score = 131 (51.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 56/216 (25%), Positives = 91/216 (42%)
Query: 22 SDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECP 81
SD GK +++ KS + A G D + PKR R TQ++ + +A F+
Sbjct: 163 SDSGKSDDEESLCKSAHGAGKGAAEDGKDH---KRPKRPRTILTTQQR-RAFKASFEVSS 218
Query: 82 HPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKLRAENNRYKE 141
P K R+ L+ E GL V+ WFQN+R +MK R + Q + + Q + ++
Sbjct: 219 KPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRQQQQ--QQDQQNTQRLSSAQTN 276
Query: 142 ALGNATCPNCGGPAALGEMSFDEQHLRIENARLREEIDRISGIAAKYVGKPLSSFPHLTP 201
GNA P + +Q L IE + + R G+ P H+ P
Sbjct: 277 GSGNAGMEGIMNPYTA--LPTPQQLLAIEQSVYSSDPFR-QGLTP-----PQMPGDHMHP 328
Query: 202 RSLDLGFTNLGTQSGFVGEMYGGCDLIRSISGPSEA 237
+ F +L + + + G C L S +GP ++
Sbjct: 329 YGAEPLFHDLDSDDTSLSNL-GDCFLATSEAGPLQS 363
>MGI|MGI:1277163 [details] [associations]
symbol:Vax1 "ventral anterior homeobox containing gene 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0001764 "neuron migration" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IMP] [GO:0007406
"negative regulation of neuroblast proliferation" evidence=IMP]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0007417 "central
nervous system development" evidence=IMP] [GO:0007420 "brain
development" evidence=IMP] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0031490 "chromatin DNA binding" evidence=IDA]
[GO:0035914 "skeletal muscle cell differentiation" evidence=IMP]
[GO:0043010 "camera-type eye development" evidence=IGI] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0060021 "palate
development" evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:1277163
GO:GO:0005634 GO:GO:0007411 GO:GO:0001764 GO:GO:0007420
GO:GO:0007406 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0043010 GO:GO:0060021
GO:GO:0000976 GO:GO:0035914 GO:GO:0031490 eggNOG:NOG323848
GeneTree:ENSGT00680000099870 CTD:11023 HOGENOM:HOG000049217
HOVERGEN:HBG007558 KO:K09318 OMA:ASEDCNK EMBL:AF064554
EMBL:AB020495 EMBL:BC111818 IPI:IPI00135400 IPI:IPI00762603
RefSeq:NP_033527.1 UniGene:Mm.23801 ProteinModelPortal:Q2NKI2
SMR:Q2NKI2 STRING:Q2NKI2 PhosphoSite:Q2NKI2 PRIDE:Q2NKI2
Ensembl:ENSMUST00000172821 GeneID:22326 KEGG:mmu:22326
UCSC:uc008ibg.1 InParanoid:Q2NKI2 OrthoDB:EOG4H9XN9 NextBio:302557
Bgee:Q2NKI2 CleanEx:MM_VAX1 Genevestigator:Q2NKI2 Uniprot:Q2NKI2
Length = 338
Score = 130 (50.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 30/73 (41%), Positives = 41/73 (56%)
Query: 42 EMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 101
E+ P G D D PKR R T Q+ +E F+ C + ++R EL+R+L L Q
Sbjct: 88 EIILPKGLDLD---RPKRTRTS-FTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQ 143
Query: 102 VKFWFQNKRTQMK 114
VK WFQN+RT+ K
Sbjct: 144 VKVWFQNRRTKQK 156
>UNIPROTKB|F1S8T0 [details] [associations]
symbol:PITX3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0070306
"lens fiber cell differentiation" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0030901 "midbrain
development" evidence=IEA] [GO:0007626 "locomotory behavior"
evidence=IEA] [GO:0002089 "lens morphogenesis in camera-type eye"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045893 GO:GO:0071542
GO:GO:0043565 GO:GO:0007626 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0048666 GO:GO:0030901 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0002089 GO:GO:0070306
GeneTree:ENSGT00700000104438 OMA:LCKGGFA EMBL:CU407032
Ensembl:ENSSSCT00000011571 Uniprot:F1S8T0
Length = 299
Score = 132 (51.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 27/92 (29%), Positives = 49/92 (53%)
Query: 36 SGTETMEMEAPSGDDQDPSQHPKRKRYHRH-TQRQIQEMEAFFKECPHPDDKQRKELSRE 94
S +E P G +D S K++R H T +Q+QE+EA F+ +PD R+E++
Sbjct: 39 SDSEKASASLPGGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVW 98
Query: 95 LGLEPLQVKFWFQNKRTQMKAQHERHENQILK 126
L +V+ WF+N+R + + + + ++ K
Sbjct: 99 TNLTEARVRVWFKNRRAKWRKRERSQQAELCK 130
Score = 38 (18.4 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 8/14 (57%), Positives = 8/14 (57%)
Query: 482 PGRPPGIVLSAATS 495
PG PP V S A S
Sbjct: 223 PGLPPAAVSSGAVS 236
>UNIPROTKB|E1BF87 [details] [associations]
symbol:PRRX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IEA] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA] [GO:0042474 "middle ear
morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA] [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472
GO:GO:0030326 GO:GO:0051216 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0048844 GO:GO:0048701
GeneTree:ENSGT00700000104279 GO:GO:0002053 GO:GO:0045880
GO:GO:0042474 OMA:GVSMANS EMBL:DAAA02032213 EMBL:DAAA02032214
EMBL:DAAA02032215 IPI:IPI00713783 Ensembl:ENSBTAT00000003817
Uniprot:E1BF87
Length = 166
Score = 117 (46.2 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 26/78 (33%), Positives = 45/78 (57%)
Query: 44 EAPSGDDQDPSQHPKRKRYHRHT--QRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 101
E PS ++ K++R +R T Q+Q +E F+ +PD R+EL+R + L +
Sbjct: 1 ECPSPGRSSAAKRKKKQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEAR 60
Query: 102 VKFWFQNKRTQMKAQHER 119
V+ WFQN+R + + ++ER
Sbjct: 61 VQVWFQNRRAKFR-RNER 77
>UNIPROTKB|H0YIZ3 [details] [associations]
symbol:PRRX2 "Paired mesoderm homeobox protein 2"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 EMBL:AL590369 HGNC:HGNC:21338
ChiTaRS:PRRX2 Ensembl:ENST00000557730 Uniprot:H0YIZ3
Length = 166
Score = 117 (46.2 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 29/91 (31%), Positives = 49/91 (53%)
Query: 44 EAPSGDDQDPSQHPKRKRYHRHT--QRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 101
E PS ++ K++R +R T Q+Q +E F+ +PD R+EL+R + L +
Sbjct: 3 ECPSPGRGSAAKRKKKQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEAR 62
Query: 102 VKFWFQNKRTQMKAQHERHENQILKAENQKL 132
V+ WFQN+R A+ R+E +L + + L
Sbjct: 63 VQVWFQNRR----AKFRRNERAMLASRSASL 89
>UNIPROTKB|F1NYF2 [details] [associations]
symbol:NKX6-2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0010454 "negative regulation of cell fate
commitment" evidence=IEA] [GO:0010455 "positive regulation of cell
fate commitment" evidence=IEA] [GO:0021912 "regulation of
transcription from RNA polymerase II promoter involved in spinal
cord motor neuron fate specification" evidence=IEA] [GO:0021913
"regulation of transcription from RNA polymerase II promoter
involved in ventral spinal cord interneuron specification"
evidence=IEA] [GO:0022010 "central nervous system myelination"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IEA] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0030154
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976
GeneTree:ENSGT00680000099625 GO:GO:0010455 GO:GO:0010454
EMBL:AADN02047157 EMBL:AADN02047158 IPI:IPI00600245
Ensembl:ENSGALT00000018301 Uniprot:F1NYF2
Length = 133
Score = 109 (43.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 34/113 (30%), Positives = 58/113 (51%)
Query: 59 RKRYHRHT--QRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQ 116
+K++ R T +QI +E F++ + +R L+ LG+ QVK WFQN+RT+ +
Sbjct: 22 KKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR-- 79
Query: 117 HERHENQILKAENQKLRAENNRYKEALGNATCPNCGGPAALGEMSFDEQHLRI 169
+RH ++ A+ +K +E + KE+ N P L S DE+ R+
Sbjct: 80 -KRHAAEMASAK-KKHDSETEKLKESSDNEDDDEYNKP--LDPNSDDEKITRL 128
>UNIPROTKB|I3L383 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC103702 HGNC:HGNC:5119 Ensembl:ENST00000498634
Uniprot:I3L383
Length = 128
Score = 109 (43.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 27/79 (34%), Positives = 43/79 (54%)
Query: 65 HTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQI 124
+++ Q E+E F P+ K+R E+S LGL QVK WFQN+R + K ++ + +
Sbjct: 2 YSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPS 61
Query: 125 LKAENQKLRAEN-NRYKEA 142
K E ++L + R EA
Sbjct: 62 SKCEQEELEKQKLERAPEA 80
>UNIPROTKB|F1NMY3 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007625
"grooming behavior" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0019233 "sensory perception of
pain" evidence=IEA] [GO:0021516 "dorsal spinal cord development"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00700000104332
OMA:MERAQEV EMBL:AADN02070205 EMBL:AADN02070206 EMBL:AADN02027051
EMBL:AADN02027057 EMBL:AADN02027058 EMBL:AADN02027059
EMBL:AADN02027047 EMBL:AADN02027048 EMBL:AADN02027049
EMBL:AADN02027050 EMBL:AADN02027052 EMBL:AADN02027053
EMBL:AADN02027054 EMBL:AADN02027055 EMBL:AADN02027056
EMBL:AADN02027060 EMBL:AADN02027061 EMBL:AADN02027062
EMBL:AADN02027063 EMBL:AADN02027064 EMBL:AADN02027065
EMBL:AADN02027066 EMBL:AADN02027067 EMBL:AADN02027068
EMBL:AADN02027069 EMBL:AADN02070203 EMBL:AADN02070204
EMBL:AADN02073361 IPI:IPI00572938 Ensembl:ENSGALT00000028037
Uniprot:F1NMY3
Length = 240
Score = 126 (49.4 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 37/120 (30%), Positives = 58/120 (48%)
Query: 22 SDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECP 81
S LG+ E ++ S T+ P Q + R+ Y R+ Q E+E F P
Sbjct: 115 SGLGEEAESSEQSPSPTQLFPWMRP----QAAGRRRGRQTYSRY---QTLELEKEFLFNP 167
Query: 82 HPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKLRAENNRYKE 141
+ K+R E+S LGL QVK WFQN+R + K ++ + + K E ++L + R +E
Sbjct: 168 YLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELEKQMERAQE 227
>UNIPROTKB|G3V2N3 [details] [associations]
symbol:PRRX1 "Paired mesoderm homeobox protein 1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005730 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:Z97200 HGNC:HGNC:9142 ChiTaRS:PRRX1
ProteinModelPortal:G3V2N3 SMR:G3V2N3 Ensembl:ENST00000497230
ArrayExpress:G3V2N3 Bgee:G3V2N3 Uniprot:G3V2N3
Length = 200
Score = 123 (48.4 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 34/122 (27%), Positives = 59/122 (48%)
Query: 14 DMTRRSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRK-RYHRHT--QRQI 70
DM ++ ++G+ E+ T + D + + KRK R +R T Q+
Sbjct: 47 DMVAAQADENVGEAGRSLLESPGLTSGSDTPQQDNDQLNSEEKKKRKQRRNRTTFNSSQL 106
Query: 71 QEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQ 130
Q +E F+ +PD R++L+R + L +V+ WFQN+R A+ R+E +L +N
Sbjct: 107 QALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRR----AKFRRNERAMLANKNA 162
Query: 131 KL 132
L
Sbjct: 163 SL 164
>MGI|MGI:108067 [details] [associations]
symbol:Nkx2-1 "NK2 homeobox 1" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001764 "neuron
migration" evidence=IMP] [GO:0002016 "regulation of blood volume by
renin-angiotensin" evidence=ISO] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;IDA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0006644 "phospholipid metabolic process"
evidence=IGI] [GO:0007389 "pattern specification process"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP] [GO:0007420
"brain development" evidence=ISO;IGI;IMP] [GO:0007492 "endoderm
development" evidence=IMP] [GO:0007626 "locomotory behavior"
evidence=ISO;IMP] [GO:0007631 "feeding behavior" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0009887 "organ morphogenesis" evidence=IMP] [GO:0010628
"positive regulation of gene expression" evidence=ISO] [GO:0010719
"negative regulation of epithelial to mesenchymal transition"
evidence=ISO] [GO:0021537 "telencephalon development" evidence=IMP]
[GO:0021759 "globus pallidus development" evidence=ISO;IMP]
[GO:0021766 "hippocampus development" evidence=IMP] [GO:0021795
"cerebral cortex cell migration" evidence=IMP] [GO:0021798
"forebrain dorsal/ventral pattern formation" evidence=IMP]
[GO:0021877 "forebrain neuron fate commitment" evidence=IGI;IMP]
[GO:0021879 "forebrain neuron differentiation" evidence=IMP]
[GO:0021892 "cerebral cortex GABAergic interneuron differentiation"
evidence=IMP] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=IGI;IMP] [GO:0021983 "pituitary gland development"
evidence=IMP] [GO:0022029 "telencephalon cell migration"
evidence=IMP] [GO:0030324 "lung development" evidence=IGI;ISO;IMP]
[GO:0030336 "negative regulation of cell migration" evidence=ISO]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=ISO] [GO:0030878 "thyroid
gland development" evidence=IGI;ISO;IMP] [GO:0031128 "developmental
induction" evidence=IMP] [GO:0032496 "response to
lipopolysaccharide" evidence=ISO] [GO:0033327 "Leydig cell
differentiation" evidence=IMP] [GO:0042538 "hyperosmotic salinity
response" evidence=ISO] [GO:0042696 "menarche" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO;IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;IGI;IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI;ISO;IDA] [GO:0048646 "anatomical structure
formation involved in morphogenesis" evidence=IMP] [GO:0048663
"neuron fate commitment" evidence=IMP] [GO:0048709 "oligodendrocyte
differentiation" evidence=IGI] [GO:0060430 "lung saccule
development" evidence=IGI] [GO:0060486 "Clara cell differentiation"
evidence=IGI] [GO:0060510 "Type II pneumocyte differentiation"
evidence=IGI] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:108067 GO:GO:0007411 GO:GO:0021766
GO:GO:0001764 GO:GO:0033327 GO:GO:0045471 GO:GO:0007631
GO:GO:0043565 GO:GO:0032496 GO:GO:0006644 GO:GO:0045944
GO:GO:0007626 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0003705 GO:GO:0000122
GO:GO:0030336 GO:GO:0044212 GO:GO:0009887 GO:GO:0009725
GO:GO:0046545 GO:GO:0060510 GO:GO:0021983 GO:GO:0007492
GO:GO:0021877 GO:GO:0048709 GO:GO:0042538 GO:GO:0021759
GO:GO:0021892 GO:GO:0030512 GO:GO:0060441 GO:GO:0010719
GO:GO:0021795 GO:GO:0002016 GO:GO:0030878 GO:GO:0060430
GO:GO:0021798 GO:GO:0060486 eggNOG:NOG328614
GeneTree:ENSGT00700000104098 HOGENOM:HOG000231923
HOVERGEN:HBG006689 CTD:7080 KO:K09342 OMA:MRNSASA GO:GO:0031128
GO:GO:0042696 EMBL:U19755 EMBL:BC080868 IPI:IPI00116260 PIR:S53724
RefSeq:NP_001139670.1 RefSeq:NP_033411.3 UniGene:Mm.89972
ProteinModelPortal:P50220 SMR:P50220 STRING:P50220
PhosphoSite:P50220 PRIDE:P50220 Ensembl:ENSMUST00000001536
Ensembl:ENSMUST00000178477 GeneID:21869 KEGG:mmu:21869
UCSC:uc007npf.2 InParanoid:P50220 OrthoDB:EOG4X6CB3 NextBio:301368
Bgee:P50220 CleanEx:MM_NKX2-1 CleanEx:MM_TTF1 Genevestigator:P50220
GermOnline:ENSMUSG00000001496 Uniprot:P50220
Length = 372
Score = 130 (50.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 35/97 (36%), Positives = 51/97 (52%)
Query: 53 PSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 112
PS P+RKR +Q Q+ E+E FK+ + +R+ L+ + L P QVK WFQN R +
Sbjct: 157 PSA-PRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYK 215
Query: 113 MKAQHERHENQILKAENQKLRAENNRYKEALGNATCP 149
MK Q + KA Q+L+ ++ G A CP
Sbjct: 216 MKRQAKD------KAAQQQLQQDSGGGGGGGGGAGCP 246
>RGD|3866 [details] [associations]
symbol:Nkx2-1 "NK2 homeobox 1" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA polymerase
II promoter" evidence=IEA;ISO] [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0002016 "regulation of blood volume by
renin-angiotensin" evidence=IDA] [GO:0003677 "DNA binding"
evidence=ISO;IDA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;IDA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IMP;TAS]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0006644 "phospholipid metabolic process"
evidence=IEA;ISO] [GO:0007389 "pattern specification process"
evidence=ISO] [GO:0007411 "axon guidance" evidence=IEA;ISO]
[GO:0007420 "brain development" evidence=ISO] [GO:0007492 "endoderm
development" evidence=IEA;ISO] [GO:0007626 "locomotory behavior"
evidence=IEA;ISO] [GO:0007631 "feeding behavior" evidence=IMP]
[GO:0009725 "response to hormone stimulus" evidence=IEA;ISO]
[GO:0009887 "organ morphogenesis" evidence=ISO] [GO:0010628 "positive
regulation of gene expression" evidence=ISO] [GO:0010719 "negative
regulation of epithelial to mesenchymal transition" evidence=IEA;ISO]
[GO:0021537 "telencephalon development" evidence=ISO] [GO:0021759
"globus pallidus development" evidence=IEA;ISO] [GO:0021766
"hippocampus development" evidence=IEA;ISO] [GO:0021795 "cerebral
cortex cell migration" evidence=IEA;ISO] [GO:0021798 "forebrain
dorsal/ventral pattern formation" evidence=IEA;ISO] [GO:0021877
"forebrain neuron fate commitment" evidence=IEA;ISO] [GO:0021879
"forebrain neuron differentiation" evidence=ISO] [GO:0021892
"cerebral cortex GABAergic interneuron differentiation"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=ISO] [GO:0021983 "pituitary gland
development" evidence=IEA;ISO] [GO:0022029 "telencephalon cell
migration" evidence=ISO] [GO:0030324 "lung development" evidence=ISO]
[GO:0030336 "negative regulation of cell migration" evidence=IEA;ISO]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=IEA;ISO] [GO:0030878 "thyroid
gland development" evidence=IEA;ISO] [GO:0030900 "forebrain
development" evidence=ISO] [GO:0031128 "developmental induction"
evidence=IEA;ISO] [GO:0032496 "response to lipopolysaccharide"
evidence=IDA] [GO:0033327 "Leydig cell differentiation"
evidence=IEA;ISO] [GO:0042538 "hyperosmotic salinity response"
evidence=IDA] [GO:0042696 "menarche" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;ISO;IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA;ISO]
[GO:0045471 "response to ethanol" evidence=IEP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0045944 "positive regulation of transcription from RNA polymerase
II promoter" evidence=IEA;ISO;IDA] [GO:0046545 "development of
primary female sexual characteristics" evidence=IEP] [GO:0048646
"anatomical structure formation involved in morphogenesis"
evidence=ISO] [GO:0048663 "neuron fate commitment" evidence=ISO]
[GO:0048709 "oligodendrocyte differentiation" evidence=IEA;ISO]
[GO:0060430 "lung saccule development" evidence=IEA;ISO] [GO:0060441
"epithelial tube branching involved in lung morphogenesis"
evidence=IEA;ISO] [GO:0060486 "Clara cell differentiation"
evidence=IEA;ISO] [GO:0060510 "Type II pneumocyte differentiation"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:3866 GO:GO:0007411 GO:GO:0021766 GO:GO:0001764
GO:GO:0005654 GO:GO:0033327 GO:GO:0045471 GO:GO:0007631 GO:GO:0043565
GO:GO:0032496 GO:GO:0006644 GO:GO:0045944 GO:GO:0007626 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0003705 GO:GO:0000122 GO:GO:0030336 GO:GO:0044212
GO:GO:0009725 GO:GO:0046545 GO:GO:0060510 GO:GO:0021983 GO:GO:0007492
GO:GO:0021877 GO:GO:0048709 GO:GO:0042538 GO:GO:0021759 GO:GO:0021892
GO:GO:0030512 GO:GO:0060441 GO:GO:0010719 GO:GO:0021795 GO:GO:0002016
GO:GO:0030878 GO:GO:0060430 GO:GO:0021798 GO:GO:0060486
eggNOG:NOG328614 HOGENOM:HOG000231923 HOVERGEN:HBG006689
GO:GO:0031128 GO:GO:0042696 OrthoDB:EOG4X6CB3 EMBL:X53858 EMBL:D38035
IPI:IPI00554071 PIR:S12002 UniGene:Rn.34265 PDB:1FTT PDBsum:1FTT
DisProt:DP00071 ProteinModelPortal:P23441 SMR:P23441 IntAct:P23441
MINT:MINT-125247 STRING:P23441 PhosphoSite:P23441 UCSC:RGD:3866
InParanoid:P23441 EvolutionaryTrace:P23441 Genevestigator:P23441
GermOnline:ENSRNOG00000008644 Uniprot:P23441
Length = 372
Score = 130 (50.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 35/97 (36%), Positives = 51/97 (52%)
Query: 53 PSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 112
PS P+RKR +Q Q+ E+E FK+ + +R+ L+ + L P QVK WFQN R +
Sbjct: 157 PSA-PRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYK 215
Query: 113 MKAQHERHENQILKAENQKLRAENNRYKEALGNATCP 149
MK Q + KA Q+L+ ++ G A CP
Sbjct: 216 MKRQAKD------KAAQQQLQQDSGGGGGGGGGAGCP 246
>ZFIN|ZDB-GENE-050114-3 [details] [associations]
symbol:lmx1ba "LIM homeobox transcription factor 1,
beta a" species:7955 "Danio rerio" [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0030917
"midbrain-hindbrain boundary development" evidence=IGI] [GO:0030902
"hindbrain development" evidence=IMP] [GO:0021592 "fourth ventricle
development" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0061386 "closure of optic fissure" evidence=IGI]
[GO:0060041 "retina development in camera-type eye" evidence=IGI]
[GO:0002072 "optic cup morphogenesis involved in camera-type eye
development" evidence=IGI] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 ZFIN:ZDB-GENE-050114-3
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0060041 GeneTree:ENSGT00700000104050 GO:GO:0030917
GO:GO:0061386 HOGENOM:HOG000231629 GO:GO:0021592 HOVERGEN:HBG052335
EMBL:BX511196 EMBL:CABZ01060115 EMBL:CABZ01060116 EMBL:CABZ01060117
EMBL:CABZ01060118 EMBL:CABZ01060119 EMBL:CABZ01084097
EMBL:CABZ01084098 EMBL:CABZ01084099 EMBL:CABZ01084100 EMBL:AY551078
IPI:IPI00616332 UniGene:Dr.94065 Ensembl:ENSDART00000126544
Uniprot:Q4L1M5
Length = 375
Score = 130 (50.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 36/111 (32%), Positives = 56/111 (50%)
Query: 22 SDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECP 81
SD K +++D + K S D +DP + PKR R TQ++ + +A F+
Sbjct: 158 SDSDKSEDEDLDVKPEKGAGGQGKGSDDSKDP-RRPKRPRTILTTQQR-RAFKASFEVSS 215
Query: 82 HPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKL 132
P K R+ L+ E GL V+ WFQN+R +MK R + Q + +Q+L
Sbjct: 216 KPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRQQQQQEQQNSQRL 266
>WB|WBGene00000439 [details] [associations]
symbol:ceh-16 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0009957 "epidermal cell fate specification" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0045026 "plasma membrane fusion" evidence=IGI;IMP] [GO:0048859
"formation of anatomical boundary" evidence=IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009792
GO:GO:0043565 GO:GO:0045944 GO:GO:0040011 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0040015 GO:GO:0000976 GO:GO:0010172
GO:GO:0009957 GO:GO:0048859 GeneTree:ENSGT00680000099870
EMBL:AY647457 EMBL:FO080380 PIR:S44752 PIR:T15488
RefSeq:NP_498898.2 UniGene:Cel.25260 ProteinModelPortal:P34326
SMR:P34326 STRING:P34326 EnsemblMetazoa:C13G5.1.1
EnsemblMetazoa:C13G5.1.2 GeneID:191618 KEGG:cel:CELE_C13G5.1
UCSC:C13G5.1 CTD:191618 WormBase:C13G5.1 eggNOG:NOG306728
HOGENOM:HOG000022417 InParanoid:P34326 OMA:PTFASPN NextBio:949698
GO:GO:0045026 PROSITE:PS00033 Uniprot:P34326
Length = 187
Score = 121 (47.7 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 54 SQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 113
S+ KR R T Q+ ++ F+E + +K+R+EL+ ELGL Q+K WFQNKR ++
Sbjct: 84 SEEEKRPRT-AFTGDQLDRLKTEFRESRYLTEKRRQELAHELGLNESQIKIWFQNKRAKL 142
Query: 114 K 114
K
Sbjct: 143 K 143
>RGD|1304784 [details] [associations]
symbol:Lmx1a "LIM homeobox transcription factor 1 alpha"
species:10116 "Rattus norvegicus" [GO:0001558 "regulation of cell
growth" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA;ISO]
[GO:0007417 "central nervous system development" evidence=ISO]
[GO:0007420 "brain development" evidence=IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0021542 "dentate gyrus development"
evidence=IEA;ISO] [GO:0021549 "cerebellum development"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=ISO] [GO:0021953 "central nervous system neuron
differentiation" evidence=IEA;ISO] [GO:0030182 "neuron
differentiation" evidence=ISO] [GO:0030901 "midbrain development"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA;ISO] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IEA;ISO] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 RGD:1304784
GO:GO:0005634 GO:GO:0007411 GO:GO:0007420 GO:GO:0001558
GO:GO:0046872 GO:GO:0071542 GO:GO:0043565 GO:GO:0008270
GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0021549 GO:GO:0030901
GeneTree:ENSGT00700000104050 GO:GO:0021542 GO:GO:0021953 CTD:4009
KO:K09371 OMA:GNAGMEG IPI:IPI00869778 RefSeq:NP_001099437.2
UniGene:Rn.137284 Ensembl:ENSRNOT00000006163 GeneID:289201
KEGG:rno:289201 NextBio:629386 ArrayExpress:F1LRJ8 Uniprot:F1LRJ8
Length = 382
Score = 130 (50.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 57/216 (26%), Positives = 92/216 (42%)
Query: 22 SDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECP 81
SD GK DD E+ + + S D +D + PKR R TQ++ + +A F+
Sbjct: 163 SDSGK--SDDEESLCKSAHGAGKGASEDGKD-HKRPKRPRTILTTQQR-RAFKASFEVSS 218
Query: 82 HPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKLRAENNRYKE 141
P K R+ L+ E GL V+ WFQN+R +MK R + Q + + Q + ++
Sbjct: 219 KPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRQQQQ--QQDQQNTQRLSSAQTN 276
Query: 142 ALGNATCPNCGGPAALGEMSFDEQHLRIENARLREEIDRISGIAAKYVGKPLSSFPHLTP 201
GNA P + +Q L IE + + R G+ P H+ P
Sbjct: 277 GSGNAGMEGIMNPYTT--LPTPQQLLAIEQSVYNSDPFR-QGLTP-----PQMPGDHMHP 328
Query: 202 RSLDLGFTNLGTQSGFVGEMYGGCDLIRSISGPSEA 237
+ F +L + + + G C L S +GP ++
Sbjct: 329 YGAEPLFHDLDSDDTSLSNL-GDCFLATSEAGPLQS 363
>WB|WBGene00003377 [details] [associations]
symbol:mls-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0042661 "regulation of mesodermal cell
fate specification" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IMP] [GO:0008284 "positive regulation
of cell proliferation" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0000132 GO:GO:0002119
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104206 GO:GO:0042661 HSSP:P13297
eggNOG:NOG312519 EMBL:FO080826 RefSeq:NP_508815.2
ProteinModelPortal:Q18533 SMR:Q18533 STRING:Q18533
EnsemblMetazoa:C39E6.4 GeneID:180751 KEGG:cel:CELE_C39E6.4
UCSC:C39E6.4 CTD:180751 WormBase:C39E6.4 HOGENOM:HOG000020310
InParanoid:Q18533 OMA:MTTMSSQ NextBio:910768 Uniprot:Q18533
Length = 341
Score = 129 (50.5 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 38/111 (34%), Positives = 59/111 (53%)
Query: 16 TRRSSE-SDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEME 74
TR S+ S L EDD + G++ EA S D PSQ+ K+K ++ Q+ ++E
Sbjct: 164 TRDSTGGSPLESDAEDDDDIGRGSDD---EANSSD---PSQNRKKKTRTVFSRSQVSQLE 217
Query: 75 AFFKECP-HPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQI 124
F EC + ++R L+++L L QVK WFQN+R + K Q + + I
Sbjct: 218 MMF-ECKRYLSSQERSNLAQKLHLTETQVKIWFQNRRNKFKRQAQTDDTNI 267
>TAIR|locus:2013980 [details] [associations]
symbol:HB18 "homeobox-leucine zipper protein 18"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:AC008148 EMBL:AK118149 EMBL:BT005594 EMBL:AK175837
EMBL:AK175965 IPI:IPI00520212 RefSeq:NP_177248.3 UniGene:At.35255
HSSP:Q6B2C0 ProteinModelPortal:Q8GXM7 SMR:Q8GXM7
EnsemblPlants:AT1G70920.1 GeneID:843431 KEGG:ath:AT1G70920
GeneFarm:3959 TAIR:At1g70920 eggNOG:NOG312506 InParanoid:Q8GXM7
OMA:HTEMECE PhylomeDB:Q8GXM7 ProtClustDB:CLSN2918454
Genevestigator:Q8GXM7 GermOnline:AT1G70920 Uniprot:Q8GXM7
Length = 206
Score = 123 (48.4 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 32/106 (30%), Positives = 53/106 (50%)
Query: 33 ETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELS 92
+T+ E M P ++ D + +R++ R T+ Q +E F + KQ+K+L+
Sbjct: 41 KTEEDREWMIGATPHVNEDDSNSGGRRRKKLRLTKEQSHLLEESFIQNHTLTPKQKKDLA 100
Query: 93 RELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKLRAENNR 138
L L QV+ WFQN+R + K +H E + LK L+ +N R
Sbjct: 101 TFLKLSQRQVEVWFQNRRARSKLKHTEMECEYLKRWFGSLKEQNRR 146
>UNIPROTKB|F1PP15 [details] [associations]
symbol:RHOXF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0019953
"sexual reproduction" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0019953 OMA:NKRARCR
GeneTree:ENSGT00530000063899 EMBL:AAEX03026834
Ensembl:ENSCAFT00000029306 Uniprot:F1PP15
Length = 182
Score = 120 (47.3 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 30/97 (30%), Positives = 54/97 (55%)
Query: 29 EDDYETKSGTETMEMEAPSGDDQDPSQH---PKRKRY---HRHTQRQIQEMEAFFKECPH 82
E +E G + + AP Q + P+R+R ++ TQ Q+QE+E+ F+ +
Sbjct: 66 EGIHEVGGGVQELGQLAPEELPQAVAARAPQPRRRRRAQRNKFTQVQVQELESAFQHTQY 125
Query: 83 PDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHER 119
PD R+EL+R + + ++V+ WF+N+R + K + ER
Sbjct: 126 PDVLTRQELARRMDVTEIRVQVWFKNRRAKYK-RDER 161
>UNIPROTKB|O93385 [details] [associations]
symbol:PITX2 "Pituitary homeobox 2" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA] [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IEA] [GO:0001569
"patterning of blood vessels" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0002074 "extraocular skeletal muscle development"
evidence=IEA] [GO:0003171 "atrioventricular valve development"
evidence=IEA] [GO:0003253 "cardiac neural crest cell migration
involved in outflow tract morphogenesis" evidence=IEA] [GO:0003350
"pulmonary myocardium development" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007520 "myoblast fusion"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0021763 "subthalamic nucleus development"
evidence=IEA] [GO:0021855 "hypothalamus cell migration"
evidence=IEA] [GO:0021983 "pituitary gland development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0031076 "embryonic camera-type eye development"
evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035886 "vascular smooth muscle cell differentiation"
evidence=IEA] [GO:0035993 "deltoid tuberosity development"
evidence=IEA] [GO:0042476 "odontogenesis" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0048536
"spleen development" evidence=IEA] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IEA] [GO:0051219 "phosphoprotein
binding" evidence=IEA] [GO:0055009 "atrial cardiac muscle tissue
morphogenesis" evidence=IEA] [GO:0055015 "ventricular cardiac
muscle cell development" evidence=IEA] [GO:0060412 "ventricular
septum morphogenesis" evidence=IEA] [GO:0060460 "left lung
morphogenesis" evidence=IEA] [GO:0060577 "pulmonary vein
morphogenesis" evidence=IEA] [GO:0060578 "superior vena cava
morphogenesis" evidence=IEA] [GO:0061031 "endodermal digestive
tract morphogenesis" evidence=IEA] [GO:0061072 "iris morphogenesis"
evidence=IEA] [GO:0061325 "cell proliferation involved in outflow
tract morphogenesis" evidence=IEA] [GO:0070986 "left/right axis
specification" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0061184 "positive regulation of dermatome development"
evidence=IDA] [GO:0045663 "positive regulation of myoblast
differentiation" evidence=IDA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IDA] [GO:2000287 "positive regulation of
myotome development" evidence=IDA] [GO:2000288 "positive regulation
of myoblast proliferation" evidence=IDA] [GO:0007368 "determination
of left/right symmetry" evidence=IEP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0016055 GO:GO:0001078
GO:GO:0045944 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0030334 GO:GO:0030326 GO:GO:0007368 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976 GO:GO:0001105
GO:GO:0031490 GO:GO:0001191 GO:GO:0045663 GO:GO:0043388
GO:GO:2000288 eggNOG:NOG249113 HOVERGEN:HBG068770 EMBL:AF076640
EMBL:AF077092 EMBL:AF063935 IPI:IPI00573554 IPI:IPI00602044
PIR:JW0097 RefSeq:NP_990341.1 UniGene:Gga.3398
ProteinModelPortal:O93385 SMR:O93385 STRING:O93385 GeneID:395862
KEGG:gga:395862 CTD:5308 KO:K04686 NextBio:20815929 GO:GO:0061184
GO:GO:2000287 Uniprot:O93385
Length = 333
Score = 128 (50.1 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 33/117 (28%), Positives = 61/117 (52%)
Query: 17 RRSSESDLGKLKEDDYETKSGTETMEME-APSG--DD---QDPSQHPKRKRYHRH-TQRQ 69
R S E+ +L+ S E E E + G +D +DPS+ +++R H T +Q
Sbjct: 53 RSSLEAAKHRLEVHTISDTSSPEAAEKEKSQQGKSEDAGPEDPSKKKRQRRQRTHFTSQQ 112
Query: 70 IQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILK 126
+QE+EA F+ +PD R+E++ L +V+ WF+N+R + + + + ++ K
Sbjct: 113 LQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCK 169
Score = 43 (20.2 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 17/68 (25%), Positives = 26/68 (38%)
Query: 430 SPEGRKSMLKLAERMVTSFCTGVGASTAHAWTTLSATGSDDVR--VMTRKSMDDPGRPPG 487
SP S + ++ MV S TGV S ++ L+ + + V T P PP
Sbjct: 228 SPPNSISSMSMSSSMVPSAVTGVPGSGLNSLNNLNNLSNPSLNSAVPTPACPYAPPTPPY 287
Query: 488 IVLSAATS 495
+ S
Sbjct: 288 VYRDTCNS 295
>UNIPROTKB|H0YJC8 [details] [associations]
symbol:PITX1 "Pituitary homeobox 1" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC008406
HGNC:HGNC:9004 ChiTaRS:PITX1 Ensembl:ENST00000503586 Uniprot:H0YJC8
Length = 208
Score = 123 (48.4 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 29/95 (30%), Positives = 52/95 (54%)
Query: 28 KEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRH-TQRQIQEMEAFFKECPHPDDK 86
KE E K ++ G DP++ K++R H T +Q+QE+EA F+ +PD
Sbjct: 99 KERGGEPKGPEDSGAGGTGCGGADDPAKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMS 158
Query: 87 QRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHE 121
R+E++ L +V+ WF+N+R + + + ER++
Sbjct: 159 MREEIAVWTNLTEPRVRVWFKNRRAKWR-KRERNQ 192
>ZFIN|ZDB-GENE-990415-178 [details] [associations]
symbol:nkx2.3 "NK2 transcription factor related 3"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990415-178 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HSSP:P23441 eggNOG:NOG310976
GeneTree:ENSGT00700000104098 HOGENOM:HOG000231923
HOVERGEN:HBG006689 KO:K09343 OrthoDB:EOG4WM4WF EMBL:CU929568
EMBL:U66571 EMBL:BC066525 IPI:IPI00495786 RefSeq:NP_571498.1
UniGene:Dr.269 SMR:Q98871 STRING:Q98871 Ensembl:ENSDART00000057094
GeneID:30698 KEGG:dre:30698 CTD:30698 InParanoid:Q98871 OMA:SCMLAGR
NextBio:20807048 Uniprot:Q98871
Length = 321
Score = 128 (50.1 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 36/100 (36%), Positives = 55/100 (55%)
Query: 26 KLKED--DYETKS-GT--ETMEMEAPSGDDQDPSQHPKRKRYHR--HTQRQIQEMEAFFK 78
KL+++ D+ETKS G T E EA D + +Q + +R R +Q Q+ E+E FK
Sbjct: 103 KLEDELEDHETKSCGAILRTPECEAEVHSDTERAQRQRTRRKPRVLFSQAQVFELERRFK 162
Query: 79 ECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHE 118
+ + +R+ L+ L L QVK WFQN+R + K Q +
Sbjct: 163 QQRYLSAPEREHLASTLKLTSTQVKIWFQNRRYKCKRQRQ 202
>POMBASE|SPBC21B10.13c [details] [associations]
symbol:yox1 "MBF complex negative regulatory component
Yox1" species:4896 "Schizosaccharomyces pombe" [GO:0000083
"regulation of transcription involved in G1/S phase of mitotic cell
cycle" evidence=IC;TAS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000978 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding" evidence=IC;IMP] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;IPI]
[GO:0030907 "MBF transcription complex" evidence=NAS] [GO:0043565
"sequence-specific DNA binding" evidence=ISM] [GO:0071276 "cellular
response to cadmium ion" evidence=IMP] [GO:0071585 "detoxification
of cadmium ion" evidence=IMP] [GO:0071930 "negative regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IMP] [GO:0071931 "positive regulation of transcription
involved in G1/S phase of mitotic cell cycle" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
SMART:SM00389 PomBase:SPBC21B10.13c EMBL:CU329671 GO:GO:0071276
GO:GO:0071585 GO:GO:0001078 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000978 GO:GO:0030907 GO:GO:0071931 eggNOG:COG5576
GO:GO:0071930 EMBL:L14773 OrthoDB:EOG4NKG55 PIR:S50010
RefSeq:NP_595674.1 ProteinModelPortal:P40923 STRING:P40923
EnsemblFungi:SPBC21B10.13c.1 GeneID:2540309 KEGG:spo:SPBC21B10.13c
NextBio:20801438 Uniprot:P40923
Length = 201
Score = 122 (48.0 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 33/113 (29%), Positives = 60/113 (53%)
Query: 31 DYETKSGTETMEM----EAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDK 86
D +KSG ++ EA + +D++ Q +KR R T + +E +F + P P
Sbjct: 5 DSPSKSGNTGKDLISNNEAKNHEDEETHQ---KKRRRRTTDAEATLLEQYFLKTPKPSLI 61
Query: 87 QRKELSREL--GLEPLQVKFWFQNKRTQMKAQHERHENQIL-KAENQKLRAEN 136
+R+ELS++L + P +++ WFQNKR ++ + N++ EN LR ++
Sbjct: 62 ERQELSKKLKSSMTPRELQIWFQNKRQSLRRSNCLSRNRLEGTGENSLLRRKS 114
>UNIPROTKB|O95475 [details] [associations]
symbol:SIX6 "Homeobox protein SIX6" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009887 "organ morphogenesis" evidence=TAS] [GO:0007601 "visual
perception" evidence=TAS] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0007601 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887 Orphanet:264200
Orphanet:2543 eggNOG:NOG244436 HOGENOM:HOG000261680
HOVERGEN:HBG003609 CTD:4990 EMBL:AF031648 EMBL:AJ011785
EMBL:AF141651 EMBL:BC069413 EMBL:AB041399 IPI:IPI00030821
RefSeq:NP_031400.2 UniGene:Hs.194756 ProteinModelPortal:O95475
SMR:O95475 STRING:O95475 PhosphoSite:O95475 PaxDb:O95475
PRIDE:O95475 DNASU:4990 Ensembl:ENST00000327720 GeneID:4990
KEGG:hsa:4990 UCSC:uc001xfa.4 GeneCards:GC14P060975 HGNC:HGNC:10892
HPA:HPA001403 MIM:212550 MIM:606326 neXtProt:NX_O95475
PharmGKB:PA35792 InParanoid:O95475 OMA:TASMFQL OrthoDB:EOG4JQ3ZD
PhylomeDB:O95475 GenomeRNAi:4990 NextBio:19216 ArrayExpress:O95475
Bgee:O95475 CleanEx:HS_SIX6 Genevestigator:O95475
GermOnline:ENSG00000184302 Uniprot:O95475
Length = 246
Score = 125 (49.1 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 29/93 (31%), Positives = 52/93 (55%)
Query: 60 KRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQ--H 117
++ H +R + ++ + P+P+ +++EL++ GL P QV WF+N+R + +A
Sbjct: 130 QKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAAAK 189
Query: 118 ERHENQIL-KAENQKLRAENNRYKEALGNATCP 149
R + Q+L + + LRAE + E LG AT P
Sbjct: 190 NRLQQQVLSQGSGRALRAEGDGTPEVLGVATSP 222
>MGI|MGI:98218 [details] [associations]
symbol:Prrx2 "paired related homeobox 2" species:10090 "Mus
musculus" [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IGI] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IGI] [GO:0042472 "inner ear morphogenesis"
evidence=IGI] [GO:0042474 "middle ear morphogenesis" evidence=IGI]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IGI] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IGI] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IGI] [GO:0048844 "artery morphogenesis"
evidence=IGI] [GO:0051216 "cartilage development" evidence=IGI]
[GO:0071837 "HMG box domain binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:98218 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472 GO:GO:0030326
GO:GO:0051216 HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0048844 GO:GO:0048701 GO:GO:0002053
GO:GO:0045880 GO:GO:0042474 HOVERGEN:HBG021349 KO:K09329
eggNOG:NOG309174 CTD:51450 EMBL:X52875 EMBL:X14572 IPI:IPI00319581
PIR:I48410 RefSeq:NP_033142.2 UniGene:Mm.1802
ProteinModelPortal:Q06348 SMR:Q06348 MINT:MINT-1782155
STRING:Q06348 PhosphoSite:Q06348 PRIDE:Q06348 GeneID:20204
KEGG:mmu:20204 InParanoid:Q06348 NextBio:297791 CleanEx:MM_PRRX2
Genevestigator:Q06348 GermOnline:ENSMUSG00000039476 Uniprot:Q06348
Length = 247
Score = 125 (49.1 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 36/118 (30%), Positives = 59/118 (50%)
Query: 20 SESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQR-----QIQEME 74
+E+ +G +E + SGTE + GD P + KRK+ R + Q+Q +E
Sbjct: 59 AEARVGAAREPSGGS-SGTEAAPQD---GDCPSPGRGTKRKKKQRRNRTTFNSSQLQALE 114
Query: 75 AFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKL 132
F+ +PD R+EL+R + L +V+ WFQN+R A+ R+E +L + L
Sbjct: 115 RVFERTHYPDAFVREELARRVNLSEARVQVWFQNRR----AKFRRNERAMLATRSASL 168
>MGI|MGI:1888519 [details] [associations]
symbol:Lmx1a "LIM homeobox transcription factor 1 alpha"
species:10090 "Mus musculus" [GO:0001558 "regulation of cell
growth" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP] [GO:0007420
"brain development" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010468 "regulation of gene expression"
evidence=IMP] [GO:0021542 "dentate gyrus development" evidence=IMP]
[GO:0021549 "cerebellum development" evidence=IMP] [GO:0021766
"hippocampus development" evidence=IMP] [GO:0021953 "central
nervous system neuron differentiation" evidence=IMP] [GO:0030182
"neuron differentiation" evidence=IMP] [GO:0030901 "midbrain
development" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:1888519 GO:GO:0005634 GO:GO:0007411
GO:GO:0001558 GO:GO:0046872 GO:GO:0071542 GO:GO:0043565
GO:GO:0008270 GO:GO:0045665 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021549
GO:GO:0030901 GO:GO:0010468 GeneTree:ENSGT00700000104050
GO:GO:0021542 HOGENOM:HOG000231629 GO:GO:0021953 CTD:4009
eggNOG:NOG243427 HOVERGEN:HBG052335 KO:K09371 OMA:GNAGMEG
OrthoDB:EOG4QFWDN EMBL:AF226662 IPI:IPI00123446 RefSeq:NP_387501.1
UniGene:Mm.330081 ProteinModelPortal:Q9JKU8 SMR:Q9JKU8
STRING:Q9JKU8 PhosphoSite:Q9JKU8 PRIDE:Q9JKU8
Ensembl:ENSMUST00000028003 Ensembl:ENSMUST00000111377 GeneID:110648
KEGG:mmu:110648 InParanoid:Q9JKU8 NextBio:364391 Bgee:Q9JKU8
CleanEx:MM_LMX1A Genevestigator:Q9JKU8
GermOnline:ENSMUSG00000026686 Uniprot:Q9JKU8
Length = 382
Score = 129 (50.5 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 61/218 (27%), Positives = 94/218 (43%)
Query: 22 SDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECP 81
SD GK DD E+ + + S D +D + PKR R TQ++ + +A F+
Sbjct: 163 SDSGK--SDDEESLCKSAHGAGKGASEDGKD-HKRPKRPRTILTTQQR-RAFKASFEVSS 218
Query: 82 HPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAEN-QKLR-AENNRY 139
P K R+ L+ E GL V+ WFQN+R +MK R + Q +N Q+L A+ N
Sbjct: 219 KPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRQQQQQQDQQNTQRLTSAQTN-- 276
Query: 140 KEALGNATCPNCGGPAALGEMSFDEQHLRIENARLREEIDRISGIAAKYVGKPLSSFPHL 199
GNA P + +Q L IE + + R G+ P H+
Sbjct: 277 --GSGNAGMEGIMNPYTT--LPTPQQLLAIEQSVYNSDPFR-QGLTP-----PQMPGDHM 326
Query: 200 TPRSLDLGFTNLGTQSGFVGEMYGGCDLIRSISGPSEA 237
P + F +L + + + G C L S +GP ++
Sbjct: 327 HPYGAEPLFHDLDSDDTSLSNL-GDCFLATSEAGPLQS 363
>TAIR|locus:2059143 [details] [associations]
symbol:HAT9 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:AC004786 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683864 EMBL:U09341 EMBL:U09342 EMBL:AJ441253
EMBL:AK229218 IPI:IPI00526618 PIR:A84617 PIR:T52371 PIR:T52372
RefSeq:NP_179865.1 UniGene:At.12844 UniGene:At.67823
ProteinModelPortal:P46603 SMR:P46603 EnsemblPlants:AT2G22800.1
GeneID:816811 KEGG:ath:AT2G22800 GeneFarm:3963 TAIR:At2g22800
eggNOG:NOG323848 InParanoid:P46603 OMA:MHMPAST PhylomeDB:P46603
Genevestigator:P46603 GermOnline:AT2G22800 Uniprot:P46603
Length = 274
Score = 126 (49.4 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 36/118 (30%), Positives = 58/118 (49%)
Query: 26 KLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDD 85
K + D E E M S +D RK+ R T++Q +E FK+ +
Sbjct: 79 KRERDGGEESPEEEEMTERVISDYHEDEEGISARKKL-RLTKQQSALLEESFKDHSTLNP 137
Query: 86 KQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKLRAENNRYKEAL 143
KQ++ L+R+L L P QV+ WFQN+R + K + + + LK + L EN R ++ +
Sbjct: 138 KQKQVLARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLADENIRLQKEI 195
>UNIPROTKB|F1SMS6 [details] [associations]
symbol:RAX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0043010 "camera-type eye
development" evidence=IEA] [GO:0021854 "hypothalamus development"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0007389
GO:GO:0060173 GO:GO:0021854 GeneTree:ENSGT00700000104256
OMA:CGPGFGD EMBL:CU076088 Ensembl:ENSSSCT00000005417 Uniprot:F1SMS6
Length = 347
Score = 128 (50.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 38/118 (32%), Positives = 63/118 (53%)
Query: 45 APSGDDQDPSQHPKRK-RYHR--HTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 101
APS + PK+K R +R T Q+ E+E F++ +PD R+EL+ ++ L ++
Sbjct: 121 APSDSKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVR 180
Query: 102 VKFWFQNKRTQMKAQHERHENQILKAENQKLRAENNRYKEA----LGNATCPNCGGPA 155
V+ WFQN+R + + Q E+ E +K ++ L + + A LG A+ GGPA
Sbjct: 181 VQVWFQNRRAKWRRQ-EKLEVSSMKLQDSPLLSFSRSPPAAALAPLG-ASPEGSGGPA 236
>FB|FBgn0085396 [details] [associations]
symbol:CG34367 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:AE014134 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0000976 GeneTree:ENSGT00700000104279
UniGene:Dm.26780 GeneID:5740879 KEGG:dme:Dmel_CG34367
FlyBase:FBgn0085396 GenomeRNAi:5740879 NextBio:20891918
RefSeq:NP_001097140.1 ProteinModelPortal:A8DYR8 SMR:A8DYR8
EnsemblMetazoa:FBtr0112592 UCSC:CG34367-RC InParanoid:A8DYR8
OrthoDB:EOG4M640D PhylomeDB:A8DYR8 Bgee:A8DYR8 Uniprot:A8DYR8
Length = 420
Score = 129 (50.5 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 31/80 (38%), Positives = 48/80 (60%)
Query: 49 DDQDPSQ-HPKRKRYHRH-TQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWF 106
D D S + K++R + T Q+ E+E F+E +PD R+ELS+ LGL +V+ WF
Sbjct: 181 DPLDTSLVNTKQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWF 240
Query: 107 QNKRTQMKAQHERHENQILK 126
QN+R + + +HENQ+ K
Sbjct: 241 QNRRAKCR----KHENQMHK 256
>UNIPROTKB|F1MC25 [details] [associations]
symbol:LMX1A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0030901 "midbrain development" evidence=IEA] [GO:0021953
"central nervous system neuron differentiation" evidence=IEA]
[GO:0021549 "cerebellum development" evidence=IEA] [GO:0021542
"dentate gyrus development" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0001558 "regulation of cell growth"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0007411 GO:GO:0001558 GO:GO:0046872 GO:GO:0071542
GO:GO:0043565 GO:GO:0008270 GO:GO:0045665 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021549
GO:GO:0030901 GeneTree:ENSGT00700000104050 GO:GO:0021542
GO:GO:0021953 CTD:4009 KO:K09371 OMA:GNAGMEG EMBL:DAAA02006817
EMBL:DAAA02006818 EMBL:DAAA02006819 EMBL:DAAA02006820
EMBL:DAAA02006821 EMBL:DAAA02006822 IPI:IPI00701360
RefSeq:NP_001178254.1 UniGene:Bt.106456 Ensembl:ENSBTAT00000015947
GeneID:510296 KEGG:bta:510296 NextBio:20869365 Uniprot:F1MC25
Length = 382
Score = 128 (50.1 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 57/216 (26%), Positives = 92/216 (42%)
Query: 22 SDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECP 81
SD GK DD E+ + + S D +D + PKR R TQ++ + +A F+
Sbjct: 163 SDSGK--SDDEESLCKSAHGAGKGASEDSKD-HKRPKRPRTILTTQQR-RAFKASFEVSS 218
Query: 82 HPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKLRAENNRYKE 141
P K R+ L+ E GL V+ WFQN+R +MK R + Q + + Q + ++
Sbjct: 219 KPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRQQQQ--QQDQQNTQRLSSAQTN 276
Query: 142 ALGNATCPNCGGPAALGEMSFDEQHLRIENARLREEIDRISGIAAKYVGKPLSSFPHLTP 201
G+A P + +Q L IE + + R G+ P H+ P
Sbjct: 277 GGGSAGMEGIMNPYTA--LPTSQQLLAIEQSVYSSDPFR-QGLTP-----PQMPGDHMHP 328
Query: 202 RSLDLGFTNLGTQSGFVGEMYGGCDLIRSISGPSEA 237
+ F L ++ + + G C L S +GP +A
Sbjct: 329 YGAEPLFHELDSEDTSLSNL-GDCFLATSEAGPLQA 363
>UNIPROTKB|Q9PVY0 [details] [associations]
symbol:RX1 "Retinal homeobox protein Rx1" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 eggNOG:NOG261733 GeneTree:ENSGT00700000104256
HOVERGEN:HBG021349 OrthoDB:EOG4V4387 EMBL:AB015750 EMBL:AF420601
IPI:IPI00599352 RefSeq:NP_989435.2 UniGene:Gga.48437
UniGene:Gga.55791 ProteinModelPortal:Q9PVY0 SMR:Q9PVY0 PRIDE:Q9PVY0
Ensembl:ENSGALT00000032299 GeneID:373893 KEGG:gga:373893 CTD:30062
InParanoid:Q9PVY0 KO:K09332 NextBio:20813425 ArrayExpress:Q9PVY0
Uniprot:Q9PVY0
Length = 228
Score = 123 (48.4 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 33/116 (28%), Positives = 60/116 (51%)
Query: 21 ESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKEC 80
E DLG+L+ K G A + ++Q +H R+ T Q+ E+E F++
Sbjct: 7 EGDLGELR------KPGDSEGTPPAAAEEEQPKKKH--RRNRTTFTTYQLHELERAFEKS 58
Query: 81 PHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKLRAEN 136
+PD R+EL+ ++ L ++V+ WFQN+R + + Q E+ E +K + + + N
Sbjct: 59 HYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQ-EKMEASSMKLHDTPMLSFN 113
>TAIR|locus:2205075 [details] [associations]
symbol:ATHB13 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;IDA] [GO:0009744 "response to sucrose
stimulus" evidence=IMP] [GO:0009965 "leaf morphogenesis"
evidence=IMP] [GO:0048826 "cotyledon morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009744
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009965 GO:GO:0000976 KO:K09338 EMBL:AF208044
EMBL:AC013289 EMBL:AY057572 EMBL:AY133645 EMBL:AY086888
IPI:IPI00519626 PIR:H96719 RefSeq:NP_177136.1 UniGene:At.23736
UniGene:At.68137 ProteinModelPortal:Q8LC03 SMR:Q8LC03 STRING:Q8LC03
PaxDb:Q8LC03 PRIDE:Q8LC03 EnsemblPlants:AT1G69780.1 GeneID:843314
KEGG:ath:AT1G69780 GeneFarm:3958 TAIR:At1g69780 eggNOG:NOG250192
HOGENOM:HOG000006025 InParanoid:Q8LC03 OMA:NPILPSC PhylomeDB:Q8LC03
ProtClustDB:CLSN2682576 Genevestigator:Q8LC03 GO:GO:0048826
Uniprot:Q8LC03
Length = 294
Score = 126 (49.4 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 28/86 (32%), Positives = 49/86 (56%)
Query: 52 DPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRT 111
D SQ ++KR R Q++ +E F+ + +++ +L+R LGL+P Q+ WFQN+R
Sbjct: 78 DGSQMGEKKR--RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRA 135
Query: 112 QMKAQHERHENQILKAENQKLRAENN 137
+ K + + LK + L+AEN+
Sbjct: 136 RWKTKQLEKDYDTLKRQFDTLKAEND 161
Score = 41 (19.5 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 6/26 (23%), Positives = 16/26 (61%)
Query: 252 EFLRMAQAGDPLWTDQNQWSSVFCGI 277
+F + + +G + ++N S++FC +
Sbjct: 253 QFFQNSSSGQSMVKEENSISNMFCAM 278
>ZFIN|ZDB-GENE-980526-216 [details] [associations]
symbol:eng1a "engrailed 1a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR000047 InterPro:IPR000747 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-216 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00680000099870 PROSITE:PS00033
HOVERGEN:HBG005975 InterPro:IPR019549 InterPro:IPR019737
Pfam:PF10525 EMBL:CABZ01070420 EMBL:BC080209 IPI:IPI00500053
UniGene:Dr.75072 SMR:Q68EL7 STRING:Q68EL7
Ensembl:ENSDART00000012506 InParanoid:Q68EL7 Uniprot:Q68EL7
Length = 231
Score = 123 (48.4 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 25/79 (31%), Positives = 46/79 (58%)
Query: 36 SGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSREL 95
SG T +++ + + + + P+ T Q+Q ++A F+ + +++R+ L+REL
Sbjct: 125 SGPRTRKLKKKNNNTESDDKRPRTA----FTAEQLQRLKAEFQTSRYITEQRRQALAREL 180
Query: 96 GLEPLQVKFWFQNKRTQMK 114
GL Q+K WFQNKR ++K
Sbjct: 181 GLNESQIKIWFQNKRAKIK 199
>UNIPROTKB|J9P9S0 [details] [associations]
symbol:PRRX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104279
CTD:5396 KO:K09329 EMBL:AAEX03005214 EMBL:AAEX03005215
GeneID:609105 KEGG:cfa:609105 RefSeq:XP_862211.1
ProteinModelPortal:J9P9S0 Ensembl:ENSCAFT00000049641 Uniprot:J9P9S0
Length = 217
Score = 122 (48.0 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 34/122 (27%), Positives = 58/122 (47%)
Query: 14 DMTRRSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRK-RYHRHT--QRQI 70
DM ++ +G+ E+ T + D + + KRK R +R T Q+
Sbjct: 47 DMVAAQADESVGEAGRSLLESPGLTSGSDTPQQDNDQLNSEEKKKRKQRRNRTTFNSSQL 106
Query: 71 QEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQ 130
Q +E F+ +PD R++L+R + L +V+ WFQN+R A+ R+E +L +N
Sbjct: 107 QALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRR----AKFRRNERAMLANKNA 162
Query: 131 KL 132
L
Sbjct: 163 SL 164
>UNIPROTKB|Q643W9 [details] [associations]
symbol:Prrx1 "Paired mesoderm homeobox protein 1"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
RGD:628884 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000231518
EMBL:CH473958 HOVERGEN:HBG021349 UniGene:Rn.203584 EMBL:AY730764
IPI:IPI00471690 SMR:Q643W9 STRING:Q643W9 Ensembl:ENSRNOT00000042557
Genevestigator:Q643W9 Uniprot:Q643W9
Length = 217
Score = 122 (48.0 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 34/122 (27%), Positives = 58/122 (47%)
Query: 14 DMTRRSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRK-RYHRHT--QRQI 70
DM ++ +G+ E+ T + D + + KRK R +R T Q+
Sbjct: 47 DMVAAQADESVGEAGRSLLESPGLTSGSDTPQQDNDQLNSEEKKKRKQRRNRTTFNSSQL 106
Query: 71 QEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQ 130
Q +E F+ +PD R++L+R + L +V+ WFQN+R A+ R+E +L +N
Sbjct: 107 QALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRR----AKFRRNERAMLANKNA 162
Query: 131 KL 132
L
Sbjct: 163 SL 164
>UNIPROTKB|Q05917 [details] [associations]
symbol:EN2 "Homeobox protein engrailed-2" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030175 "filopodium" evidence=IDA] [GO:0030027 "lamellipodium"
evidence=IDA] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0045727 "positive regulation of translation" evidence=IDA]
[GO:0042327 "positive regulation of phosphorylation" evidence=IDA]
InterPro:IPR000047 InterPro:IPR000747 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0007411 GO:GO:0003700 GO:GO:0030027
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0030175 GO:GO:0030426 GO:GO:0045727 GO:GO:0000976
GO:GO:0042327 PROSITE:PS00033 HOVERGEN:HBG005975 InterPro:IPR019549
InterPro:IPR019737 Pfam:PF10525 KO:K09319 EMBL:L12696 EMBL:L12697
IPI:IPI00579837 PIR:F48423 RefSeq:NP_001254648.1 UniGene:Gga.56328
GeneID:100859435 KEGG:gga:100859435 CTD:2020 Uniprot:Q05917
Length = 289
Score = 120 (47.3 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 24/64 (37%), Positives = 42/64 (65%)
Query: 51 QDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKR 110
++P++ KR R T Q+Q ++A F+ + +++R+ L++ELGL Q+K WFQNKR
Sbjct: 194 KNPNKEDKRPRT-AFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELGLNESQIKIWFQNKR 252
Query: 111 TQMK 114
++K
Sbjct: 253 AKIK 256
Score = 47 (21.6 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 18 RSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKR 59
RS + + +E + + G + P GD P HP R
Sbjct: 6 RSPREEAAEPQESGGDAEPGGGRRALLLPPGDPPHPHPHPHR 47
>UNIPROTKB|F1N8W4 [details] [associations]
symbol:NKX2-1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104098 EMBL:AADN02003404 EMBL:AADN02003405
IPI:IPI00603869 Ensembl:ENSGALT00000037808 Uniprot:F1N8W4
Length = 319
Score = 126 (49.4 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 29/88 (32%), Positives = 49/88 (55%)
Query: 57 PKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQ 116
P+RKR +Q Q+ E+E FK+ + +R+ L+ + L P QVK WFQN R +MK Q
Sbjct: 132 PRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQ 191
Query: 117 -HERHENQILKAENQKLRAENNRYKEAL 143
++ Q ++ EN + + + + A+
Sbjct: 192 AKDKAAQQQMQQENGSCQQQQSPRRVAV 219
>UNIPROTKB|E1C639 [details] [associations]
symbol:Gga.30007 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104256
EMBL:AADN02006258 IPI:IPI00598714 Ensembl:ENSGALT00000020505
OMA:WRKHEKF Uniprot:E1C639
Length = 160
Score = 113 (44.8 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 36/117 (30%), Positives = 59/117 (50%)
Query: 18 RSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQD-----PSQHP-----KRKRYHR--H 65
R+++S L ED G E +E + +++D P HP K KR R
Sbjct: 35 RATDSPASFLGED-----IGREHLEGKRKHEEEEDQLCDFPVDHPLHVERKGKRRIRTTF 89
Query: 66 TQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHEN 122
T Q+QE+E F+ +PD R +L+ ++ L +V+ WFQN+R + + +HE+ N
Sbjct: 90 TAEQLQELEKIFQVTHYPDVHIRNQLAAKINLPEARVQIWFQNQRAKWR-KHEKFGN 145
>UNIPROTKB|Q9PVN2 [details] [associations]
symbol:VAX1 "Ventral anterior homeobox 1" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 eggNOG:NOG323848 EMBL:AF117299 EMBL:AB032248
IPI:IPI00603024 RefSeq:NP_990130.1 UniGene:Gga.321
ProteinModelPortal:Q9PVN2 GeneID:395582 KEGG:gga:395582 CTD:11023
HOGENOM:HOG000049217 HOVERGEN:HBG007558 KO:K09318 NextBio:20815656
Uniprot:Q9PVN2
Length = 327
Score = 130 (50.8 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 30/73 (41%), Positives = 41/73 (56%)
Query: 42 EMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 101
E+ P G D D PKR R T Q+ +E F+ C + ++R EL+R+L L Q
Sbjct: 87 EIILPKGLDLD---RPKRTRTS-FTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQ 142
Query: 102 VKFWFQNKRTQMK 114
VK WFQN+RT+ K
Sbjct: 143 VKVWFQNRRTKQK 155
Score = 38 (18.4 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 291 VAGNYNGALQVMTAEFQVPSPLVP-TREN 318
VAG+ G LQ ++A + S P +R N
Sbjct: 288 VAGSLAGNLQELSARYLSSSAFEPYSRTN 316
>UNIPROTKB|P54821 [details] [associations]
symbol:PRRX1 "Paired mesoderm homeobox protein 1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005730 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0003713 GO:GO:0042472
GO:GO:0030326 GO:GO:0051216 HOGENOM:HOG000231518 GO:GO:0060021
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0048844
GO:GO:0048701 GO:GO:0002053 GO:GO:0045880 GO:GO:0042474
eggNOG:NOG267226 CTD:5396 HOVERGEN:HBG021349 KO:K09329
OrthoDB:EOG4RR6J8 EMBL:AB451463 EMBL:Z97200 EMBL:BC074993
EMBL:M95929 IPI:IPI00008822 IPI:IPI00221036 RefSeq:NP_008833.1
RefSeq:NP_073207.1 UniGene:Hs.283416 ProteinModelPortal:P54821
SMR:P54821 STRING:P54821 PhosphoSite:P54821 DMDM:6174916
PRIDE:P54821 DNASU:5396 Ensembl:ENST00000239461
Ensembl:ENST00000367760 GeneID:5396 KEGG:hsa:5396 UCSC:uc001ghe.3
UCSC:uc001ghf.3 GeneCards:GC01P170632 HGNC:HGNC:9142 HPA:HPA051084
MIM:167420 MIM:202650 neXtProt:NX_P54821 Orphanet:990
PharmGKB:PA33466 InParanoid:P54821 OMA:WGSAAPY PhylomeDB:P54821
ChiTaRS:PRRX1 GenomeRNAi:5396 NextBio:20925 ArrayExpress:P54821
Bgee:P54821 CleanEx:HS_PRRX1 Genevestigator:P54821
GermOnline:ENSG00000116132 Uniprot:P54821
Length = 245
Score = 123 (48.4 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 34/122 (27%), Positives = 59/122 (48%)
Query: 14 DMTRRSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRK-RYHRHT--QRQI 70
DM ++ ++G+ E+ T + D + + KRK R +R T Q+
Sbjct: 47 DMVAAQADENVGEAGRSLLESPGLTSGSDTPQQDNDQLNSEEKKKRKQRRNRTTFNSSQL 106
Query: 71 QEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQ 130
Q +E F+ +PD R++L+R + L +V+ WFQN+R A+ R+E +L +N
Sbjct: 107 QALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRR----AKFRRNERAMLANKNA 162
Query: 131 KL 132
L
Sbjct: 163 SL 164
>WB|WBGene00000450 [details] [associations]
symbol:ceh-28 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0034243 "regulation of transcription elongation from RNA
polymerase II promoter" evidence=ISS] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS] [GO:0050807 "regulation of synapse
organization" evidence=IMP] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000981
GO:GO:0000976 GO:GO:0050807 GO:GO:0034243
GeneTree:ENSGT00700000104129 KO:K09352 EMBL:Z77133 EMBL:AY205144
RefSeq:NP_510169.4 UniGene:Cel.11118 ProteinModelPortal:G5EE18
SMR:G5EE18 EnsemblMetazoa:K03A11.3 GeneID:191619
KEGG:cel:CELE_K03A11.3 CTD:191619 WormBase:K03A11.3 OMA:NPMFASA
NextBio:949702 Uniprot:G5EE18
Length = 201
Score = 120 (47.3 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 27/61 (44%), Positives = 37/61 (60%)
Query: 54 SQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 113
SQ KRK TQ Q+ E+E FK+ + +R+EL++ LGL QVK WFQN+R +
Sbjct: 100 SQQQKRKPRVLFTQHQVNELEERFKKQRYVTATEREELAQCLGLTATQVKIWFQNRRYKC 159
Query: 114 K 114
K
Sbjct: 160 K 160
>UNIPROTKB|G5EE18 [details] [associations]
symbol:ceh-28 "NK-2 family homeodomain protein CEH-28"
species:6239 "Caenorhabditis elegans" [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=ISS] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000981 GO:GO:0000976
GO:GO:0050807 GO:GO:0034243 GeneTree:ENSGT00700000104129 KO:K09352
EMBL:Z77133 EMBL:AY205144 RefSeq:NP_510169.4 UniGene:Cel.11118
ProteinModelPortal:G5EE18 SMR:G5EE18 EnsemblMetazoa:K03A11.3
GeneID:191619 KEGG:cel:CELE_K03A11.3 CTD:191619 WormBase:K03A11.3
OMA:NPMFASA NextBio:949702 Uniprot:G5EE18
Length = 201
Score = 120 (47.3 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 27/61 (44%), Positives = 37/61 (60%)
Query: 54 SQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 113
SQ KRK TQ Q+ E+E FK+ + +R+EL++ LGL QVK WFQN+R +
Sbjct: 100 SQQQKRKPRVLFTQHQVNELEERFKKQRYVTATEREELAQCLGLTATQVKIWFQNRRYKC 159
Query: 114 K 114
K
Sbjct: 160 K 160
>UNIPROTKB|F1NJ78 [details] [associations]
symbol:NKX2-1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104098 OMA:MRNSASA EMBL:AADN02003404
EMBL:AADN02003405 IPI:IPI00820181 Ensembl:ENSGALT00000032575
Uniprot:F1NJ78
Length = 345
Score = 126 (49.4 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 29/88 (32%), Positives = 49/88 (55%)
Query: 57 PKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQ 116
P+RKR +Q Q+ E+E FK+ + +R+ L+ + L P QVK WFQN R +MK Q
Sbjct: 158 PRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQ 217
Query: 117 -HERHENQILKAENQKLRAENNRYKEAL 143
++ Q ++ EN + + + + A+
Sbjct: 218 AKDKAAQQQMQQENGSCQQQQSPRRVAV 245
>UNIPROTKB|F1N8D2 [details] [associations]
symbol:HESX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 IPI:IPI00575485 GeneTree:ENSGT00700000104128
EMBL:AADN02014018 Ensembl:ENSGALT00000008836
Ensembl:ENSGALT00000036259 Uniprot:F1N8D2
Length = 193
Score = 119 (46.9 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 66 TQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQIL 125
T+ QI+ +E FK +P R+EL+R+L LE +++ WFQN+R ++K H E+Q L
Sbjct: 124 TRNQIEVLENVFKMNSYPGIDIREELARKLDLEEDRIQIWFQNRRAKLKRSHR--ESQFL 181
Query: 126 KAEN 129
+N
Sbjct: 182 MVKN 185
>ZFIN|ZDB-GENE-010404-1 [details] [associations]
symbol:nkx2.1b "NK2 homeobox 1b" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-010404-1 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HSSP:P23441 HOVERGEN:HBG006689
KO:K09342 EMBL:AF321112 IPI:IPI00487938 RefSeq:NP_571851.1
UniGene:Dr.78792 ProteinModelPortal:Q98TX4 SMR:Q98TX4 PRIDE:Q98TX4
GeneID:81883 KEGG:dre:81883 CTD:81883 InParanoid:Q98TX4
NextBio:20934177 ArrayExpress:Q98TX4 Bgee:Q98TX4 Uniprot:Q98TX4
Length = 346
Score = 126 (49.4 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 31/92 (33%), Positives = 49/92 (53%)
Query: 40 TMEMEAPSGDDQDP-SQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLE 98
T+ A G P + P+RKR +Q Q+ E+E FK+ + +R+ L+ + L
Sbjct: 140 TLSSLADVGKGMGPLTSTPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLT 199
Query: 99 PLQVKFWFQNKRTQMKAQ-HERHENQILKAEN 129
P QVK WFQN R +MK Q ++ Q ++ +N
Sbjct: 200 PTQVKIWFQNHRYKMKRQAKDKVSQQQMQQDN 231
>UNIPROTKB|E1C143 [details] [associations]
symbol:PITX3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0002089 "lens morphogenesis in camera-type eye" evidence=IEA]
[GO:0007626 "locomotory behavior" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0048666 "neuron development" evidence=IEA] [GO:0070306 "lens
fiber cell differentiation" evidence=IEA] [GO:0071542 "dopaminergic
neuron differentiation" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0045893
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104438 CTD:5309 KO:K09357 OMA:ASPYMYR
EMBL:AADN02027826 EMBL:AADN02027827 IPI:IPI00591458
RefSeq:XP_421631.2 Ensembl:ENSGALT00000009008 GeneID:423756
KEGG:gga:423756 NextBio:20826179 Uniprot:E1C143
Length = 292
Score = 123 (48.4 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 31/112 (27%), Positives = 59/112 (52%)
Query: 20 SESDLGKLK-EDDYETKSGTETMEMEAPSGDDQDP---SQHPKRKRYHRH-TQRQIQEME 74
S SD G + E + + ++T + + DD +P S K++R H T +Q+QE+E
Sbjct: 17 SLSDSGTPQHEHSCKGQDHSDTEKSQQNQTDDSNPEDGSLKKKQRRQRTHFTSQQLQELE 76
Query: 75 AFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILK 126
A F+ +PD R+E++ L +V+ WF+N+R + + + + ++ K
Sbjct: 77 ATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCK 128
Score = 43 (20.2 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 325 KQHSDGTWAVVDVSLDNLRP 344
KQH++ T+ V + NL P
Sbjct: 264 KQHANFTYPAVQTAASNLSP 283
Score = 38 (18.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 430 SPEGRKSMLKLAERMVTSFCTGVGAST 456
SP + + + MV S TGV AS+
Sbjct: 187 SPPSSIASMTMPSSMVPSAVTGVPASS 213
>UNIPROTKB|H0YHX3 [details] [associations]
symbol:HOXA4 "Homeobox protein Hox-A4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:AC004080 HGNC:HGNC:5105 Ensembl:ENST00000511914 Uniprot:H0YHX3
Length = 140
Score = 105 (42.0 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 28/81 (34%), Positives = 43/81 (53%)
Query: 57 PKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQ 116
PKR R +T++Q+ E+E F + ++R E++ L L QVK WFQN+R + K
Sbjct: 35 PKRSRT-AYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD 93
Query: 117 HERHENQILKAENQKLRAENN 137
H K N K+R+ N+
Sbjct: 94 H--------KLPNTKMRSSNS 106
>UNIPROTKB|F1P452 [details] [associations]
symbol:PITX1 "Pituitary homeobox 1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0000988 "protein binding transcription
factor activity" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0014707 "branchiomeric
skeletal muscle development" evidence=IEA] [GO:0021983 "pituitary
gland development" evidence=IEA] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048625 "myoblast cell fate commitment" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005737
GO:GO:0005730 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000988 OMA:CKNSYLP
GeneTree:ENSGT00700000104438 EMBL:AADN02028369 IPI:IPI00820270
Ensembl:ENSGALT00000010289 Uniprot:F1P452
Length = 311
Score = 125 (49.1 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 45 APSGDDQDPSQHPKRKRYHRH-TQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVK 103
A G DP++ K++R H T +Q+QE+EA F+ +PD R+E++ L +V+
Sbjct: 74 AADGAADDPAKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVR 133
Query: 104 FWFQNKRTQMKAQHERHENQIL 125
WF+N+R + + + ER++ L
Sbjct: 134 VWFKNRRAKWR-KRERNQQMDL 154
>UNIPROTKB|P56673 [details] [associations]
symbol:PITX1 "Pituitary homeobox 1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
EMBL:AF069397 IPI:IPI00589641 UniGene:Gga.962
ProteinModelPortal:P56673 SMR:P56673 STRING:P56673 eggNOG:NOG249113
HOGENOM:HOG000273886 HOVERGEN:HBG068770 InParanoid:P56673
OrthoDB:EOG4R503Q Uniprot:P56673
Length = 311
Score = 125 (49.1 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 33/109 (30%), Positives = 61/109 (55%)
Query: 19 SSESDLGKLKEDDYETKSGTETMEMEAP-SGDDQDPSQHPKRKRYHRH-TQRQIQEMEAF 76
SS++D+ + KE K+ + A +G DP++ K++R H T +Q+QE+EA
Sbjct: 48 SSDTDVPE-KERSESRKTREDGGAGSAGCTGAADDPAKKKKQRRQRTHFTSQQLQELEAT 106
Query: 77 FKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQIL 125
F+ +PD R+E++ L +V+ WF+N+R + + + ER++ L
Sbjct: 107 FQRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWR-KRERNQQMDL 154
>UNIPROTKB|P79775 [details] [associations]
symbol:P79775 "Homeobox protein ANF-1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:U65436 IPI:IPI00575485
RefSeq:NP_990343.1 UniGene:Gga.32344 ProteinModelPortal:P79775
STRING:P79775 GeneID:395864 KEGG:gga:395864 CTD:8820
eggNOG:NOG326168 HOGENOM:HOG000112889 HOVERGEN:HBG004226 KO:K09354
NextBio:20815931 Uniprot:P79775
Length = 196
Score = 119 (46.9 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 66 TQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQIL 125
T+ QI+ +E FK +P R+EL+R+L LE +++ WFQN+R ++K H E+Q L
Sbjct: 127 TRNQIEVLENVFKMNSYPGIDIREELARKLDLEEDRIQIWFQNRRAKLKRSHR--ESQFL 184
Query: 126 KAEN 129
+N
Sbjct: 185 MVKN 188
>UNIPROTKB|J9NVF8 [details] [associations]
symbol:NKX2-4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104098 EMBL:AAEX03013750 OMA:CQNGAAT
Ensembl:ENSCAFT00000047608 Uniprot:J9NVF8
Length = 207
Score = 120 (47.3 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 27/72 (37%), Positives = 41/72 (56%)
Query: 57 PKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQ 116
P+RKR +Q Q+ E+E FK+ + +R+ L+ + L P QVK WFQN R +MK Q
Sbjct: 38 PRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQ 97
Query: 117 HERHENQILKAE 128
+ Q L+ +
Sbjct: 98 AKDKAAQQLQQD 109
>UNIPROTKB|F1NH36 [details] [associations]
symbol:Gga.55791 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0021854 "hypothalamus development" evidence=IEA]
[GO:0043010 "camera-type eye development" evidence=IEA] [GO:0060173
"limb development" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104256 EMBL:AADN02057236 EMBL:AADN02063546
IPI:IPI00822313 Ensembl:ENSGALT00000021906 OMA:MVDDSCL
ArrayExpress:F1NH36 Uniprot:F1NH36
Length = 262
Score = 123 (48.4 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 33/116 (28%), Positives = 60/116 (51%)
Query: 21 ESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKEC 80
E DLG+L+ K G A + ++Q +H R+ T Q+ E+E F++
Sbjct: 41 EGDLGELR------KPGDSEGTPPAAAEEEQPKKKH--RRNRTTFTTYQLHELERAFEKS 92
Query: 81 PHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKLRAEN 136
+PD R+EL+ ++ L ++V+ WFQN+R + + Q E+ E +K + + + N
Sbjct: 93 HYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQ-EKMEASSMKLHDTPMLSFN 147
>UNIPROTKB|Q91926 [details] [associations]
symbol:vent1 "Homeobox protein vent1" species:8355 "Xenopus
laevis" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0001707 "mesoderm
formation" evidence=IMP] [GO:0005634 "nucleus" evidence=IC]
[GO:0030509 "BMP signaling pathway" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048264 "determination of ventral identity" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0030509 GO:GO:0001707 GO:GO:0048264 HSSP:P06602
HOVERGEN:HBG082072 EMBL:X92851 PIR:S66151 RefSeq:NP_001091390.1
UniGene:Xl.51158 ProteinModelPortal:Q91926 SMR:Q91926
GeneID:100037246 KEGG:xla:100037246 CTD:100037246
Xenbase:XB-GENE-920881 Uniprot:Q91926
Length = 264
Score = 123 (48.4 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 33/113 (29%), Positives = 56/113 (49%)
Query: 15 MTRRSSESDLGKL--KEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQE 72
M R S SD EDD SG + E + + + P +R+ T +QI +
Sbjct: 85 MHRSSGSSDEFSPPGSEDDSTESSGRSSQENDTEQRE-KSPKSDLQRRLRTAFTPQQISK 143
Query: 73 MEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQIL 125
+E F + + +RK+L+ L L +QVK WFQN+R ++K Q + ++ ++
Sbjct: 144 LEQAFNKQRYLGAPERKKLATSLQLSEIQVKTWFQNRRMKLKRQIQDKQHSLV 196
>UNIPROTKB|E2RQ19 [details] [associations]
symbol:HOXB8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0021516
"dorsal spinal cord development" evidence=IEA] [GO:0019233 "sensory
perception of pain" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0007625 "grooming behavior"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0019233 GO:GO:0008344 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704
GO:GO:0000976 GO:GO:0007625 GO:GO:0021516
GeneTree:ENSGT00700000104332 OMA:MERAQEV EMBL:AAEX03006516
Ensembl:ENSCAFT00000026696 NextBio:20863956 Uniprot:E2RQ19
Length = 242
Score = 122 (48.0 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 38/125 (30%), Positives = 60/125 (48%)
Query: 19 SSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFK 78
++ S LG+ E ++ S T+ P Q + R+ Y R+ Q E+E F
Sbjct: 113 AAASGLGEEAEGSQQSPSPTQLFPWMRP----QAAGRRRGRQTYSRY---QTLELEKEFL 165
Query: 79 ECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKLRAEN-N 137
P+ K+R E+S LGL QVK WFQN+R + K ++ + + K E ++L +
Sbjct: 166 FNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELEKQKLE 225
Query: 138 RYKEA 142
R EA
Sbjct: 226 RAPEA 230
>UNIPROTKB|F1N8D1 [details] [associations]
symbol:HESX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=IEA] [GO:0030916 "otic vesicle
formation" evidence=IEA] [GO:0043584 "nose development"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0047485 "protein N-terminus
binding" evidence=IEA] [GO:0048853 "forebrain morphogenesis"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0043565
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104128 OMA:PWADTCS EMBL:AADN02014018
IPI:IPI00820422 Ensembl:ENSGALT00000036260 ArrayExpress:F1N8D1
Uniprot:F1N8D1
Length = 199
Score = 119 (46.9 bits), Expect = 0.00010, P = 0.00010
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 66 TQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQIL 125
T+ QI+ +E FK +P R+EL+R+L LE +++ WFQN+R ++K H E+Q L
Sbjct: 130 TRNQIEVLENVFKMNSYPGIDIREELARKLDLEEDRIQIWFQNRRAKLKRSHR--ESQFL 187
Query: 126 KAEN 129
+N
Sbjct: 188 MVKN 191
>UNIPROTKB|E1B853 [details] [associations]
symbol:VAX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060021 "palate
development" evidence=IEA] [GO:0043010 "camera-type eye
development" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007406 "negative
regulation of neuroblast proliferation" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0007411 GO:GO:0001764 GO:GO:0007420
GO:GO:0007406 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0043010 GO:GO:0060021
GO:GO:0031490 GeneTree:ENSGT00680000099870 OMA:ASEDCNK
EMBL:DAAA02059342 EMBL:DAAA02059343 IPI:IPI00700524
Ensembl:ENSBTAT00000032764 Uniprot:E1B853
Length = 334
Score = 125 (49.1 bits), Expect = 0.00010, P = 0.00010
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 42 EMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 101
E+ P G D D PKR R T Q+ +E F+ C + ++R EL+R+L L Q
Sbjct: 88 EIILPKGLDLD---RPKRTRTS-FTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQ 143
Query: 102 VKFWFQNKRTQMK 114
K WFQN+RT+ K
Sbjct: 144 XKVWFQNRRTKQK 156
>UNIPROTKB|A2VE85 [details] [associations]
symbol:PRRX1 "Paired related homeobox 1" species:9913 "Bos
taurus" [GO:0071837 "HMG box domain binding" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0048844 "artery
morphogenesis" evidence=IEA] [GO:0048701 "embryonic cranial
skeleton morphogenesis" evidence=IEA] [GO:0045880 "positive
regulation of smoothened signaling pathway" evidence=IEA]
[GO:0042474 "middle ear morphogenesis" evidence=IEA] [GO:0042472
"inner ear morphogenesis" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472
GO:GO:0030326 GO:GO:0051216 HOGENOM:HOG000231518 GO:GO:0060021
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0048844
GO:GO:0048701 GeneTree:ENSGT00700000104279 GO:GO:0002053
GO:GO:0045880 GO:GO:0042474 eggNOG:NOG267226 CTD:5396
HOVERGEN:HBG021349 KO:K09329 OrthoDB:EOG4RR6J8 OMA:WGSAAPY
EMBL:DAAA02042867 EMBL:DAAA02042868 EMBL:BC133623 IPI:IPI00717328
RefSeq:NP_001075208.1 UniGene:Bt.78963 SMR:A2VE85
Ensembl:ENSBTAT00000006003 GeneID:540901 KEGG:bta:540901
InParanoid:A2VE85 NextBio:20878904 Uniprot:A2VE85
Length = 245
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 34/122 (27%), Positives = 58/122 (47%)
Query: 14 DMTRRSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRK-RYHRHT--QRQI 70
DM ++ +G+ E+ T + D + + KRK R +R T Q+
Sbjct: 47 DMVAAQADESVGEAGRSLLESPGLTSGSDTPQQDNDQLNSEEKKKRKQRRNRTTFNSSQL 106
Query: 71 QEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQ 130
Q +E F+ +PD R++L+R + L +V+ WFQN+R A+ R+E +L +N
Sbjct: 107 QALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRR----AKFRRNERAMLANKNA 162
Query: 131 KL 132
L
Sbjct: 163 SL 164
>UNIPROTKB|E2RGD6 [details] [associations]
symbol:PRRX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0060021 "palate development" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IEA] [GO:0048844
"artery morphogenesis" evidence=IEA] [GO:0048701 "embryonic cranial
skeleton morphogenesis" evidence=IEA] [GO:0045880 "positive
regulation of smoothened signaling pathway" evidence=IEA]
[GO:0042474 "middle ear morphogenesis" evidence=IEA] [GO:0042472
"inner ear morphogenesis" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472
GO:GO:0030326 GO:GO:0051216 GO:GO:0060021 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0048844 GO:GO:0048701
GeneTree:ENSGT00700000104279 GO:GO:0002053 GO:GO:0045880
GO:GO:0042474 CTD:5396 KO:K09329 OMA:WGSAAPY EMBL:AAEX03005214
EMBL:AAEX03005215 RefSeq:XP_850725.1 ProteinModelPortal:E2RGD6
SMR:E2RGD6 Ensembl:ENSCAFT00000023797 GeneID:609105 KEGG:cfa:609105
NextBio:20894722 Uniprot:E2RGD6
Length = 245
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 34/122 (27%), Positives = 58/122 (47%)
Query: 14 DMTRRSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRK-RYHRHT--QRQI 70
DM ++ +G+ E+ T + D + + KRK R +R T Q+
Sbjct: 47 DMVAAQADESVGEAGRSLLESPGLTSGSDTPQQDNDQLNSEEKKKRKQRRNRTTFNSSQL 106
Query: 71 QEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQ 130
Q +E F+ +PD R++L+R + L +V+ WFQN+R A+ R+E +L +N
Sbjct: 107 QALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRR----AKFRRNERAMLANKNA 162
Query: 131 KL 132
L
Sbjct: 163 SL 164
>MGI|MGI:97712 [details] [associations]
symbol:Prrx1 "paired related homeobox 1" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IGI]
[GO:0042472 "inner ear morphogenesis" evidence=IGI] [GO:0042474
"middle ear morphogenesis" evidence=IGI;IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045880 "positive
regulation of smoothened signaling pathway" evidence=IGI]
[GO:0048701 "embryonic cranial skeleton morphogenesis"
evidence=IGI;IMP] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IGI;IMP] [GO:0048844 "artery morphogenesis"
evidence=IGI;IMP] [GO:0051216 "cartilage development"
evidence=IGI;IMP] [GO:0060021 "palate development" evidence=IMP]
[GO:0071837 "HMG box domain binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:97712 GO:GO:0005634 GO:GO:0003677 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0042472 GO:GO:0030326 GO:GO:0051216 HOGENOM:HOG000231518
GO:GO:0060021 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0048844 GO:GO:0048701 GeneTree:ENSGT00700000104279
GO:GO:0002053 GO:GO:0045880 GO:GO:0042474 eggNOG:NOG267226 CTD:5396
HOVERGEN:HBG021349 KO:K09329 OrthoDB:EOG4RR6J8 OMA:WGSAAPY
ChiTaRS:PRRX1 EMBL:L06502 EMBL:U03873 EMBL:X59725 EMBL:BC092372
IPI:IPI00118248 IPI:IPI00230653 PIR:I48902 PIR:S26076
RefSeq:NP_035257.1 RefSeq:NP_783617.2 UniGene:Mm.288642
ProteinModelPortal:P63013 SMR:P63013 IntAct:P63013 STRING:P63013
PhosphoSite:P63013 PRIDE:P63013 Ensembl:ENSMUST00000027878
Ensembl:ENSMUST00000075805 GeneID:18933 KEGG:mmu:18933
UCSC:uc007dhh.1 UCSC:uc007dhi.1 InParanoid:P63013 NextBio:295248
Bgee:P63013 CleanEx:MM_PRRX1 Genevestigator:P63013
GermOnline:ENSMUSG00000026586 Uniprot:P63013
Length = 245
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 34/122 (27%), Positives = 58/122 (47%)
Query: 14 DMTRRSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRK-RYHRHT--QRQI 70
DM ++ +G+ E+ T + D + + KRK R +R T Q+
Sbjct: 47 DMVAAQADESVGEAGRSLLESPGLTSGSDTPQQDNDQLNSEEKKKRKQRRNRTTFNSSQL 106
Query: 71 QEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQ 130
Q +E F+ +PD R++L+R + L +V+ WFQN+R A+ R+E +L +N
Sbjct: 107 QALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRR----AKFRRNERAMLANKNA 162
Query: 131 KL 132
L
Sbjct: 163 SL 164
>RGD|628884 [details] [associations]
symbol:Prrx1 "paired related homeobox 1" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA;ISO] [GO:0042472 "inner ear
morphogenesis" evidence=IEA;ISO] [GO:0042474 "middle ear
morphogenesis" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA;ISO] [GO:0048701
"embryonic cranial skeleton morphogenesis" evidence=IEA;ISO]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISO]
[GO:0048844 "artery morphogenesis" evidence=IEA;ISO] [GO:0051216
"cartilage development" evidence=IEA;ISO] [GO:0060021 "palate
development" evidence=IEA;ISO] [GO:0071837 "HMG box domain binding"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:628884 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0042472
GO:GO:0030326 GO:GO:0051216 HOGENOM:HOG000231518 GO:GO:0060021
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0048844
GO:GO:0048701 GeneTree:ENSGT00700000104279 GO:GO:0002053
GO:GO:0045880 GO:GO:0042474 eggNOG:NOG267226 CTD:5396
HOVERGEN:HBG021349 KO:K09329 OrthoDB:EOG4RR6J8 OMA:WGSAAPY
EMBL:S82911 IPI:IPI00198569 RefSeq:NP_722543.1 UniGene:Rn.203584
ProteinModelPortal:P63014 SMR:P63014 STRING:P63014
Ensembl:ENSRNOT00000004950 GeneID:266813 KEGG:rno:266813
UCSC:RGD:628884 InParanoid:P63014 NextBio:624741
ArrayExpress:P63014 Genevestigator:P63014
GermOnline:ENSRNOG00000003720 Uniprot:P63014
Length = 245
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 34/122 (27%), Positives = 58/122 (47%)
Query: 14 DMTRRSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRK-RYHRHT--QRQI 70
DM ++ +G+ E+ T + D + + KRK R +R T Q+
Sbjct: 47 DMVAAQADESVGEAGRSLLESPGLTSGSDTPQQDNDQLNSEEKKKRKQRRNRTTFNSSQL 106
Query: 71 QEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQ 130
Q +E F+ +PD R++L+R + L +V+ WFQN+R A+ R+E +L +N
Sbjct: 107 QALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRR----AKFRRNERAMLANKNA 162
Query: 131 KL 132
L
Sbjct: 163 SL 164
>MGI|MGI:109632 [details] [associations]
symbol:Rax "retina and anterior neural fold homeobox"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0021854 "hypothalamus development" evidence=IMP]
[GO:0043010 "camera-type eye development" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0060173 "limb
development" evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:109632 GO:GO:0005634 EMBL:CH466528
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043010 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0007389
GO:GO:0060173 eggNOG:NOG261733 GO:GO:0021854
GeneTree:ENSGT00700000104256 CleanEx:MM_RAX HOVERGEN:HBG021349
OrthoDB:EOG4V4387 CTD:30062 KO:K09332 OMA:CGPGFGD ChiTaRS:RAX
EMBL:AF001906 EMBL:U73177 EMBL:BC024731 EMBL:BC058757
IPI:IPI00132598 RefSeq:NP_038861.2 UniGene:Mm.489746
ProteinModelPortal:O35602 SMR:O35602 STRING:O35602
PhosphoSite:O35602 PRIDE:O35602 Ensembl:ENSMUST00000025396
GeneID:19434 KEGG:mmu:19434 InParanoid:Q6GT92 NextBio:296571
Bgee:O35602 Genevestigator:O35602 GermOnline:ENSMUSG00000024518
Uniprot:O35602
Length = 342
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 34/115 (29%), Positives = 62/115 (53%)
Query: 47 SGDDQDPSQHPKRKRYHRH----TQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQV 102
+GD + + P +K++ R+ T Q+ E+E F++ +PD R+EL+ ++ L ++V
Sbjct: 121 AGDSKLSEEEPPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRV 180
Query: 103 KFWFQNKRTQMKAQHERHENQILKAENQKLRA-ENNRYKEALGN-ATCPNCG-GP 154
+ WFQN+R + + Q E+ E +K ++ L + + AL T P G GP
Sbjct: 181 QVWFQNRRAKWRRQ-EKLEVSSMKLQDSPLLSFSRSPPSSALAPLGTGPGSGSGP 234
>ZFIN|ZDB-GENE-030131-6336 [details] [associations]
symbol:zgc:171531 "zgc:171531" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-030131-6336 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104098 HOVERGEN:HBG006689 OMA:FSHSAMG
EMBL:BX322615 EMBL:BC162156 EMBL:BC162157 IPI:IPI00508292
UniGene:Dr.107185 Ensembl:ENSDART00000110871 Uniprot:B3DFT3
Length = 345
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 31/93 (33%), Positives = 49/93 (52%)
Query: 53 PSQH--PKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKR 110
P H P+RKR +Q Q+ E+E FK+ + +R+ L+ + L P QVK WFQN R
Sbjct: 153 PPLHAAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHR 212
Query: 111 TQMKAQHERHENQILKAENQKLRAENNRYKEAL 143
+MK Q + Q L+ E + + + + A+
Sbjct: 213 YKMKRQAKDKAAQQLQQEGNLCQQQQSPRRVAV 245
>UNIPROTKB|G1K361 [details] [associations]
symbol:PRRX1 "Paired mesoderm homeobox protein 1"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AADN02033985
EMBL:AADN02033987 EMBL:AADN02033986 ProteinModelPortal:G1K361
Ensembl:ENSGALT00000033836 Uniprot:G1K361
Length = 214
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 26/97 (26%), Positives = 52/97 (53%)
Query: 36 SGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSREL 95
SG++T + + + ++ + +R+ Q+Q +E F+ +PD R++L+R +
Sbjct: 72 SGSDTPQQDNDQLNSEEKKKRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRV 131
Query: 96 GLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKL 132
L +V+ WFQN+R A+ R+E +L ++N L
Sbjct: 132 NLTEARVQVWFQNRR----AKFRRNERAMLASKNASL 164
>TAIR|locus:2049614 [details] [associations]
symbol:HB17 "homeobox-leucine zipper protein 17"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 EMBL:AJ431181
EMBL:AC005560 IPI:IPI00540169 PIR:F84424 RefSeq:NP_178252.2
UniGene:At.42490 HSSP:P01366 ProteinModelPortal:Q8S9N6 SMR:Q8S9N6
PRIDE:Q8S9N6 EnsemblPlants:AT2G01430.1 GeneID:814671
KEGG:ath:AT2G01430 GeneFarm:3960 TAIR:At2g01430 eggNOG:NOG248755
HOGENOM:HOG000241612 InParanoid:Q8S9N6 OMA:PRCERIT PhylomeDB:Q8S9N6
ProtClustDB:CLSN2917976 Genevestigator:Q8S9N6 GermOnline:AT2G01430
Uniprot:Q8S9N6
Length = 275
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 32/95 (33%), Positives = 51/95 (53%)
Query: 48 GDDQ----DPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVK 103
GDD+ D P RK+ R T+ Q + +E F++ + KQ++ L++ L L P Q++
Sbjct: 123 GDDEEFSHDDGSAPPRKKL-RLTREQSRLLEDSFRQNHTLNPKQKEVLAKHLMLRPRQIE 181
Query: 104 FWFQNKRTQMKAQHERHENQILKAENQKLRAENNR 138
WFQN+R + K + E + LK L EN+R
Sbjct: 182 VWFQNRRARSKLKQTEMECEYLKRWFGSLTEENHR 216
>UNIPROTKB|F1NF72 [details] [associations]
symbol:F1NF72 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0030902 "hindbrain
development" evidence=IEA] [GO:0030917 "midbrain-hindbrain boundary
development" evidence=IEA] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=IEA] [GO:0043473 "pigmentation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] InterPro:IPR000047 InterPro:IPR000747
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00026 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00680000099870
PROSITE:PS00033 InterPro:IPR019549 InterPro:IPR019737 Pfam:PF10525
EMBL:AADN02016916 IPI:IPI00812139 Ensembl:ENSGALT00000019794
OMA:ASNDEKR Uniprot:F1NF72
Length = 100
Score = 104 (41.7 bits), Expect = 0.00011, P = 0.00011
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 58 KRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 114
KR R T Q+Q ++A F+ + +++R+ L++EL L Q+K WFQNKR ++K
Sbjct: 4 KRPRT-AFTAEQLQRLKAEFQANRYITEQRRQSLAQELSLNESQIKIWFQNKRAKIK 59
>UNIPROTKB|H9L184 [details] [associations]
symbol:Gga.48067 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0048539 "bone marrow development" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0060218 "hematopoietic
stem cell differentiation" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AADN02014570
Ensembl:ENSGALT00000029853 OMA:MANTIPP Uniprot:H9L184
Length = 102
Score = 104 (41.7 bits), Expect = 0.00011, P = 0.00011
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 57 PKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQ 116
PKR R +T++Q+ E+E F + ++R E++ L L Q+K WFQN+R + K
Sbjct: 10 PKRSRT-AYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKD 68
Query: 117 HERHENQI 124
H+ +I
Sbjct: 69 HKLPNTKI 76
>UNIPROTKB|F1MKX5 [details] [associations]
symbol:NKX2-4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104098 EMBL:DAAA02035816 EMBL:DAAA02035817
IPI:IPI00696816 Ensembl:ENSBTAT00000015024 OMA:CQNGAAT
Uniprot:F1MKX5
Length = 278
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 28/72 (38%), Positives = 41/72 (56%)
Query: 57 PKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQ 116
P+RKR +Q Q+ E+E FK+ + +R+ L+ + L P QVK WFQN R +MK Q
Sbjct: 116 PRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQ 175
Query: 117 HERHENQILKAE 128
+ Q L+ E
Sbjct: 176 AKDKAAQQLQQE 187
>UNIPROTKB|F1NZJ4 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 EMBL:AADN02020025 EMBL:AADN02020026
EMBL:AADN02020027 EMBL:AADN02020028 EMBL:AADN02020029
EMBL:AADN02020030 IPI:IPI00818317 Ensembl:ENSGALT00000038689
ArrayExpress:F1NZJ4 Uniprot:F1NZJ4
Length = 168
Score = 114 (45.2 bits), Expect = 0.00012, P = 0.00012
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 18 RSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFF 77
+SS +++G+ E D+ +S + +M P + R+ Y R Q E+E F
Sbjct: 41 KSSSANIGE--EPDHLNQSSSPA-QMFPWMRPQAAPGRRRGRQTYSRF---QTLELEKEF 94
Query: 78 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKLRAENN 137
P+ K+R E+S LGL QVK WFQN+R + K ++ + + K E ++ A+
Sbjct: 95 LFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPASKQEGKEGEAKKE 154
Query: 138 RY 139
+
Sbjct: 155 TH 156
>UNIPROTKB|P43698 [details] [associations]
symbol:TITF1 "Thyroid transcription factor 1" species:9615
"Canis lupus familiaris" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0005654
"nucleoplasm" evidence=ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0045893 GO:GO:0005654
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOVERGEN:HBG006689 CTD:7080 KO:K09342 EMBL:X77910 PIR:I46089
RefSeq:NP_001003260.1 UniGene:Cfa.3801 ProteinModelPortal:P43698
SMR:P43698 GeneID:403940 KEGG:cfa:403940 NextBio:20817430
Uniprot:P43698
Length = 371
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 35/97 (36%), Positives = 51/97 (52%)
Query: 53 PSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 112
PS P+RKR +Q Q+ E+E FK+ + +R+ L+ + L P QVK WFQN R +
Sbjct: 157 PSA-PRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYK 215
Query: 113 MKAQHERHENQILKAENQKLRAENNRYKEALGNATCP 149
MK Q + KA Q+L+ ++ G A CP
Sbjct: 216 MKRQAKD------KAAQQQLQQDSGGGGGG-GGAGCP 245
>MGI|MGI:1918847 [details] [associations]
symbol:Isx "intestine specific homeobox" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:1901738 "regulation of vitamin A metabolic process"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:1918847 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104256 CTD:91464 eggNOG:NOG252360
HOGENOM:HOG000052524 HOVERGEN:HBG096596 OrthoDB:EOG4PZJ7F
EMBL:AK018615 EMBL:BC128289 EMBL:BC128290 IPI:IPI00316540
IPI:IPI00850211 RefSeq:NP_082113.2 UniGene:Mm.158735
ProteinModelPortal:A1A546 SMR:A1A546 STRING:A1A546
PhosphoSite:A1A546 PRIDE:A1A546 Ensembl:ENSMUST00000034034
Ensembl:ENSMUST00000174427 GeneID:71597 KEGG:mmu:71597
UCSC:uc012ggb.1 InParanoid:A1A546 OMA:CEAPENL NextBio:334069
Bgee:A1A546 CleanEx:MM_ISX Genevestigator:A1A546 Uniprot:A1A546
Length = 240
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 38/116 (32%), Positives = 54/116 (46%)
Query: 17 RRSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHR--HTQRQIQEME 74
RRS KED +T ++E P D P + K KR R T Q+QE+E
Sbjct: 39 RRSLPRPQSICKEDSRQTT--IPGSKLERPPQDQ--PQEEKKNKRRVRTTFTTEQLQELE 94
Query: 75 AFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQ 130
F +PD R +L+ + L +V+ WFQN+R + + Q E+ N L A Q
Sbjct: 95 KLFHFTHYPDIHVRSQLASRINLPEARVQIWFQNQRAKWRKQ-EKSGN--LSAPQQ 147
>FB|FBgn0024321 [details] [associations]
symbol:NK7.1 "NK7.1" species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:AE014297 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104206 HSSP:P14653 FlyBase:FBgn0024321
RefSeq:NP_001247103.1 RefSeq:NP_650357.2 RefSeq:NP_731904.1
SMR:Q9VFK4 IntAct:Q9VFK4 MINT:MINT-748602
EnsemblMetazoa:FBtr0082941 EnsemblMetazoa:FBtr0082942
EnsemblMetazoa:FBtr0306742 GeneID:41747 KEGG:dme:Dmel_CG8524
UCSC:CG8524-RA CTD:41747 InParanoid:Q9VFK4 OMA:NEAAEHK
GenomeRNAi:41747 NextBio:825376 Uniprot:Q9VFK4
Length = 721
Score = 129 (50.5 bits), Expect = 0.00013, P = 0.00013
Identities = 39/135 (28%), Positives = 56/135 (41%)
Query: 36 SGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSREL 95
+ T+E D K+K T RQI E+E F+ + +R E+++ L
Sbjct: 371 NANSTLETTEDDSDSGSTDARRKKKARTTFTGRQIFELEKMFENKKYLSASERTEMAKLL 430
Query: 96 GLEPLQVKFWFQNKRTQMKAQHERHENQIL--KAENQKLRAENNRYKEALG--------N 145
+ QVK WFQN+RT+ K Q N+ K+ N K A G N
Sbjct: 431 MVTETQVKIWFQNRRTKWKKQDNVTNNEAAEHKSSNAKPGATGTATTTPSGEPTDKRSSN 490
Query: 146 ATCPNCGGPAALGEM 160
AT P G A + E+
Sbjct: 491 ATSPTVGNAATIAEI 505
>UNIPROTKB|I3L3R1 [details] [associations]
symbol:HOXB8 "Homeobox B8, isoform CRA_a" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:CH471109
GO:GO:0000976 EMBL:AC103702 UniGene:Hs.514292 HGNC:HGNC:5119
SMR:I3L3R1 Ensembl:ENST00000576562 Uniprot:I3L3R1
Length = 242
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 38/125 (30%), Positives = 60/125 (48%)
Query: 19 SSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFK 78
++ S LG+ E ++ S T+ P Q + R+ Y R+ Q E+E F
Sbjct: 113 AAASGLGEEAEGSEQSPSPTQLFPWMRP----QAAGRRRGRQTYSRY---QTLELEKEFL 165
Query: 79 ECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKLRAEN-N 137
P+ K+R E+S LGL QVK WFQN+R + K ++ + + K E ++L +
Sbjct: 166 FNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELEKQKLE 225
Query: 138 RYKEA 142
R EA
Sbjct: 226 RAPEA 230
>UNIPROTKB|I3LRI8 [details] [associations]
symbol:I3LRI8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0046622 "positive
regulation of organ growth" evidence=IEA] [GO:0042127 "regulation
of cell proliferation" evidence=IEA] [GO:0021853 "cerebral cortex
GABAergic interneuron migration" evidence=IEA] [GO:0021846 "cell
proliferation in forebrain" evidence=IEA] [GO:0021831 "embryonic
olfactory bulb interneuron precursor migration" evidence=IEA]
[GO:0021800 "cerebral cortex tangential migration" evidence=IEA]
[GO:0021759 "globus pallidus development" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007411
GO:GO:0001764 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0046622 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
OMA:VTHPEER GO:GO:0021846 GO:GO:0021853 GO:GO:0021800 GO:GO:0021831
GO:GO:0021759 EMBL:FP339588 Ensembl:ENSSSCT00000032103
Uniprot:I3LRI8
Length = 451
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 29/93 (31%), Positives = 53/93 (56%)
Query: 27 LKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHR-HTQRQIQEMEAFFKECPHPDD 85
L +D E K G +++ + A S D ++ K++RY T Q++E+E F++ +PD
Sbjct: 186 LHPEDAEGKDGEDSVCLSAGS-DSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDV 244
Query: 86 KQRKELSRELGLEPLQVKFWFQNKRTQMKAQHE 118
R+EL+ L L +V+ WFQN+R + + + +
Sbjct: 245 FTREELAMRLDLTEARVQVWFQNRRAKWRKREK 277
>UNIPROTKB|Q9Y2V3 [details] [associations]
symbol:RAX "Retinal homeobox protein Rx" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0021854 "hypothalamus development" evidence=IEA]
[GO:0043010 "camera-type eye development" evidence=IEA] [GO:0060173
"limb development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007601 "visual perception" evidence=TAS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0007601 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0007389 GO:GO:0060173 eggNOG:NOG261733
GO:GO:0021854 Orphanet:2542 EMBL:AC067859 CleanEx:HS_RAX
HOVERGEN:HBG021349 OrthoDB:EOG4V4387 CTD:30062 KO:K09332
EMBL:AF115392 IPI:IPI00021025 RefSeq:NP_038463.2 UniGene:Hs.278957
ProteinModelPortal:Q9Y2V3 SMR:Q9Y2V3 STRING:Q9Y2V3
PhosphoSite:Q9Y2V3 DMDM:296452886 PaxDb:Q9Y2V3 PRIDE:Q9Y2V3
DNASU:30062 Ensembl:ENST00000334889 GeneID:30062 KEGG:hsa:30062
UCSC:uc002lhx.3 GeneCards:GC18M056909 H-InvDB:HIX0202674
HGNC:HGNC:18662 MIM:601881 MIM:611038 neXtProt:NX_Q9Y2V3
PharmGKB:PA38626 InParanoid:Q9Y2V3 OMA:CGPGFGD PhylomeDB:Q9Y2V3
ChiTaRS:RAX GenomeRNAi:30062 NextBio:52852 ArrayExpress:Q9Y2V3
Bgee:Q9Y2V3 Genevestigator:Q9Y2V3 GermOnline:ENSG00000134438
Uniprot:Q9Y2V3
Length = 346
Score = 124 (48.7 bits), Expect = 0.00014, P = 0.00014
Identities = 35/124 (28%), Positives = 63/124 (50%)
Query: 44 EAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVK 103
EA +++ P + +R R T Q+ E+E F++ +PD R+EL+ ++ L ++V+
Sbjct: 123 EAKLSEEEQPKKKHRRNRT-TFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQ 181
Query: 104 FWFQNKRTQMKAQHERHENQILKAENQKL----RAENNRYKEALGNATCPNCGGPAALGE 159
WFQN+R + + Q E+ E +K ++ L R+ + LG P GG A G
Sbjct: 182 VWFQNRRAKWRRQ-EKLEVSSMKLQDSPLLSFSRSPPSATLSPLGAG--PGSGGGPAGGA 238
Query: 160 MSFD 163
+ +
Sbjct: 239 LPLE 242
>UNIPROTKB|J9P485 [details] [associations]
symbol:EMX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 EMBL:AAEX03015567 EMBL:AAEX03015568
EMBL:AAEX03015569 Ensembl:ENSCAFT00000043720 Uniprot:J9P485
Length = 134
Score = 103 (41.3 bits), Expect = 0.00014, P = 0.00014
Identities = 29/94 (30%), Positives = 48/94 (51%)
Query: 54 SQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 113
++ PKR R + Q+ +E F++ + +RK+L+ L L QVK WFQN+RT+
Sbjct: 33 ARKPKRIRT-AFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKF 91
Query: 114 KAQHERHENQILKAENQKLRAENNRYKEALGNAT 147
K Q E + + +K NR++ A A+
Sbjct: 92 KRQKLEEEGSDSQ-QKKKGTHHINRWRIATKQAS 124
>UNIPROTKB|A6NFQ7 [details] [associations]
symbol:DPRX "Divergent paired-related homeobox"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC011487
IPI:IPI00556337 RefSeq:NP_001012746.1 UniGene:Hs.579941
ProteinModelPortal:A6NFQ7 SMR:A6NFQ7 STRING:A6NFQ7 PRIDE:A6NFQ7
Ensembl:ENST00000376650 GeneID:503834 KEGG:hsa:503834
UCSC:uc002qcf.1 CTD:503834 GeneCards:GC19P054136 HGNC:HGNC:32166
HPA:HPA043682 MIM:611165 neXtProt:NX_A6NFQ7 PharmGKB:PA142671957
eggNOG:NOG279221 HOGENOM:HOG000112264 InParanoid:A6NFQ7 OMA:IVHFGCC
OrthoDB:EOG47WNPP NextBio:112038 CleanEx:HS_DPRX
Genevestigator:A6NFQ7 Uniprot:A6NFQ7
Length = 191
Score = 117 (46.2 bits), Expect = 0.00014, P = 0.00014
Identities = 23/76 (30%), Positives = 44/76 (57%)
Query: 48 GDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQ 107
G DQ H RKR T++Q++++ F E P+P+ +KE++ ++ + P ++ WF+
Sbjct: 10 GKDQ---MHSHRKRT-MFTKKQLEDLNILFNENPYPNPSLQKEMASKIDIHPTVLQVWFK 65
Query: 108 NKRTQMKAQHERHENQ 123
N R ++K +H +Q
Sbjct: 66 NHRAKLKKAKCKHIHQ 81
>UNIPROTKB|Q99811 [details] [associations]
symbol:PRRX2 "Paired mesoderm homeobox protein 2"
species:9606 "Homo sapiens" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0002053 "positive regulation of
mesenchymal cell proliferation" evidence=IEA] [GO:0030326
"embryonic limb morphogenesis" evidence=IEA] [GO:0042472 "inner ear
morphogenesis" evidence=IEA] [GO:0042474 "middle ear morphogenesis"
evidence=IEA] [GO:0045880 "positive regulation of smoothened
signaling pathway" evidence=IEA] [GO:0048701 "embryonic cranial
skeleton morphogenesis" evidence=IEA] [GO:0048844 "artery
morphogenesis" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0000228 "nuclear chromosome" evidence=NAS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0043565 EMBL:CH471090
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472
GO:GO:0030326 GO:GO:0051216 HOGENOM:HOG000231518 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0048844 GO:GO:0048701
EMBL:AL590369 GO:GO:0000228 GO:GO:0002053 GO:GO:0045880
GO:GO:0042474 HOVERGEN:HBG021349 KO:K09329 OrthoDB:EOG4RR6J8
eggNOG:NOG309174 EMBL:AF061970 EMBL:BC014645 EMBL:U81600
IPI:IPI00018429 RefSeq:NP_057391.1 UniGene:Hs.660115
ProteinModelPortal:Q99811 SMR:Q99811 STRING:Q99811
PhosphoSite:Q99811 DMDM:12644475 PRIDE:Q99811
Ensembl:ENST00000372469 GeneID:51450 KEGG:hsa:51450 UCSC:uc004byh.3
CTD:51450 GeneCards:GC09P132427 HGNC:HGNC:21338 HPA:HPA026808
MIM:604675 neXtProt:NX_Q99811 PharmGKB:PA134871679
InParanoid:Q99811 OMA:GVSMANS PhylomeDB:Q99811 ChiTaRS:PRRX2
GenomeRNAi:51450 NextBio:55055 Bgee:Q99811 CleanEx:HS_PRRX2
Genevestigator:Q99811 GermOnline:ENSG00000167157 Uniprot:Q99811
Length = 253
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 32/101 (31%), Positives = 54/101 (53%)
Query: 36 SGTET--MEMEAPSGDDQDPSQHPKRKRYHRHT--QRQIQEMEAFFKECPHPDDKQRKEL 91
SG+E + E PS ++ K++R +R T Q+Q +E F+ +PD R+EL
Sbjct: 78 SGSEAAPQDGECPSPGRGSAAKRKKKQRRNRTTFNSSQLQALERVFERTHYPDAFVREEL 137
Query: 92 SRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKL 132
+R + L +V+ WFQN+R A+ R+E +L + + L
Sbjct: 138 ARRVNLSEARVQVWFQNRR----AKFRRNERAMLASRSASL 174
>UNIPROTKB|F1RWG3 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0021516 "dorsal
spinal cord development" evidence=IEA] [GO:0019233 "sensory
perception of pain" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0007625 "grooming behavior"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0019233 GO:GO:0008344 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704
GO:GO:0000976 GO:GO:0007625 GO:GO:0021516
GeneTree:ENSGT00700000104332 OMA:MERAQEV EMBL:CU856160
Ensembl:ENSSSCT00000019091 Uniprot:F1RWG3
Length = 253
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 38/125 (30%), Positives = 60/125 (48%)
Query: 19 SSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFK 78
++ S LG+ E ++ S T+ P Q + R+ Y R+ Q E+E F
Sbjct: 128 AAASGLGEEAEGSEQSPSPTQLFPWMRP----QAAGRRRGRQTYSRY---QTLELEKEFL 180
Query: 79 ECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKLRAEN-N 137
P+ K+R E+S LGL QVK WFQN+R + K ++ + + K E ++L +
Sbjct: 181 FNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELEKQKLE 240
Query: 138 RYKEA 142
R EA
Sbjct: 241 RAPEA 245
>UNIPROTKB|F1PH84 [details] [associations]
symbol:GSC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0048644 "muscle organ
morphogenesis" evidence=IEA] [GO:0042474 "middle ear morphogenesis"
evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=IEA] [GO:0023019 "signal transduction involved in
regulation of gene expression" evidence=IEA] [GO:0021904
"dorsal/ventral neural tube patterning" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0048644 GO:GO:0043565
GO:GO:0030900 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0000122 GO:GO:0048704 GO:GO:0030178
GO:GO:0021904 GO:GO:0023019 GO:GO:0042474 OMA:PVGPSCC
GeneTree:ENSGT00700000104273 EMBL:AAEX03005954
Ensembl:ENSCAFT00000028054 Uniprot:F1PH84
Length = 255
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 56 HPKRKRYHR--HTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 113
H +RKR HR T Q++ +E F+E +PD R++L+R++ L +V+ WF+N+R +
Sbjct: 155 HCRRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKW 214
Query: 114 KAQHERHENQILKAE 128
+ Q + AE
Sbjct: 215 RRQKRSSSEESENAE 229
>TAIR|locus:2129061 [details] [associations]
symbol:HAT1 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003006
"developmental process involved in reproduction" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010582 "floral
meristem determinacy" evidence=IGI] [GO:0043621 "protein
self-association" evidence=IPI] [GO:0048467 "gynoecium development"
evidence=IGI] [GO:0048507 "meristem development" evidence=IGI]
[GO:0080127 "fruit septum development" evidence=IGI]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010582
EMBL:Z97343 GO:GO:0000976 KO:K09338 HOGENOM:HOG000241612
eggNOG:KOG0483 EMBL:AL161546 EMBL:U09332 EMBL:U09333 EMBL:AJ441252
EMBL:BT005756 EMBL:BT006112 EMBL:AY087322 EMBL:AK228587
IPI:IPI00538010 PIR:B71444 RefSeq:NP_193476.1 UniGene:At.19738
ProteinModelPortal:P46600 SMR:P46600 EnsemblPlants:AT4G17460.1
GeneID:827457 KEGG:ath:AT4G17460 GeneFarm:3979 TAIR:At4g17460
InParanoid:P46600 OMA:LMCPSCE PhylomeDB:P46600
ProtClustDB:CLSN2685891 Genevestigator:P46600 GermOnline:AT4G17460
GO:GO:0080127 GO:GO:0048467 Uniprot:P46600
Length = 282
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 35/115 (30%), Positives = 57/115 (49%)
Query: 47 SGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWF 106
S +++D RK+ R ++ Q +E FKE + KQ+ L+++LGL QV+ WF
Sbjct: 122 SDEEEDYGGETCRKKL-RLSKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTARQVEVWF 180
Query: 107 QNKRTQMKAQHERHENQILKAENQKLRAENNRYKEALGNATCPNCGGPAALGEMS 161
QN+R + K + + + LK +KL EN R ++ P G+MS
Sbjct: 181 QNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLEKEAAELRALKLS-PRLYGQMS 234
>UNIPROTKB|F1SCC4 [details] [associations]
symbol:GSC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0048644 "muscle organ morphogenesis"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=IEA] [GO:0023019 "signal transduction involved in
regulation of gene expression" evidence=IEA] [GO:0021904
"dorsal/ventral neural tube patterning" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0048644 GO:GO:0043565
GO:GO:0030900 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0000122 GO:GO:0048704 GO:GO:0030178
GO:GO:0021904 GO:GO:0023019 GO:GO:0042474 KO:K09324 OMA:PVGPSCC
GeneTree:ENSGT00700000104273 EMBL:CU302448 RefSeq:XP_003482361.1
UniGene:Ssc.72109 Ensembl:ENSSSCT00000002768 GeneID:397342
KEGG:ssc:397342 CTD:397342 ArrayExpress:F1SCC4 Uniprot:F1SCC4
Length = 256
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 56 HPKRKRYHR--HTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 113
H +RKR HR T Q++ +E F+E +PD R++L+R++ L +V+ WF+N+R +
Sbjct: 156 HCRRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKW 215
Query: 114 KAQHERHENQILKAE 128
+ Q + AE
Sbjct: 216 RRQKRSSSEESENAE 230
>MGI|MGI:95841 [details] [associations]
symbol:Gsc "goosecoid homeobox" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0001085 "RNA polymerase
II transcription factor binding" evidence=IPI] [GO:0001103 "RNA
polymerase II repressing transcription factor binding"
evidence=IPI] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0009653
"anatomical structure morphogenesis" evidence=IGI] [GO:0021904
"dorsal/ventral neural tube patterning" evidence=IGI] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IDA] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=IMP] [GO:0030900 "forebrain
development" evidence=IGI] [GO:0042474 "middle ear morphogenesis"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043583 "ear development" evidence=IMP]
[GO:0048644 "muscle organ morphogenesis" evidence=IMP] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:95841 GO:GO:0048644 GO:GO:0043565 GO:GO:0030900
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0000122 GO:GO:0048704 GO:GO:0030178 GO:GO:0021904
GO:GO:0023019 GO:GO:0042474 HOGENOM:HOG000112823 CTD:145258
eggNOG:NOG247162 HOVERGEN:HBG005921 KO:K09324 OrthoDB:EOG46Q6T9
OMA:PVGPSCC EMBL:M85271 EMBL:Y13149 EMBL:Y13150 IPI:IPI00129501
PIR:A42768 RefSeq:NP_034481.1 UniGene:Mm.129
ProteinModelPortal:Q02591 SMR:Q02591 MINT:MINT-4998459
STRING:Q02591 PhosphoSite:Q02591 PRIDE:Q02591 DNASU:14836
Ensembl:ENSMUST00000021513 GeneID:14836 KEGG:mmu:14836
UCSC:uc007oxh.1 GeneTree:ENSGT00700000104273 InParanoid:Q02591
NextBio:287051 Bgee:Q02591 CleanEx:MM_GSC Genevestigator:Q02591
GermOnline:ENSMUSG00000021095 Uniprot:Q02591
Length = 256
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 56 HPKRKRYHR--HTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 113
H +RKR HR T Q++ +E F+E +PD R++L+R++ L +V+ WF+N+R +
Sbjct: 156 HCRRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKW 215
Query: 114 KAQHERHENQILKAE 128
+ Q + AE
Sbjct: 216 RRQKRSSSEESENAE 230
>UNIPROTKB|G3V7E7 [details] [associations]
symbol:Gsc "Protein Gsc" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0021904 "dorsal/ventral neural tube patterning"
evidence=IEA] [GO:0023019 "signal transduction involved in
regulation of gene expression" evidence=IEA] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0042474
"middle ear morphogenesis" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0048644 "muscle
organ morphogenesis" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:631425 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:CH473982 CTD:145258 KO:K09324 OMA:PVGPSCC
GeneTree:ENSGT00700000104273 RefSeq:NP_001178802.1
UniGene:Rn.198763 UniGene:Rn.228175 Ensembl:ENSRNOT00000014204
GeneID:317715 KEGG:rno:317715 NextBio:672077 Uniprot:G3V7E7
Length = 256
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 56 HPKRKRYHR--HTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 113
H +RKR HR T Q++ +E F+E +PD R++L+R++ L +V+ WF+N+R +
Sbjct: 156 HCRRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKW 215
Query: 114 KAQHERHENQILKAE 128
+ Q + AE
Sbjct: 216 RRQKRSSSEESENAE 230
>TAIR|locus:2171489 [details] [associations]
symbol:HAT2 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=IEP] [GO:0009826 "unidimensional cell growth"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009641 "shade avoidance"
evidence=IEP] InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0009734
GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826 KO:K09338
HOGENOM:HOG000241612 GO:GO:0009641 EMBL:AB018117
ProtClustDB:CLSN2685891 EMBL:AB067629 EMBL:AJ431183 EMBL:AF428450
EMBL:AY052324 EMBL:AY061904 EMBL:U09335 IPI:IPI00526064 PIR:T52368
RefSeq:NP_199548.1 UniGene:At.25127 ProteinModelPortal:P46601
SMR:P46601 IntAct:P46601 STRING:P46601 EnsemblPlants:AT5G47370.1
GeneID:834784 KEGG:ath:AT5G47370 GeneFarm:3986 TAIR:At5g47370
eggNOG:NOG256142 InParanoid:P46601 OMA:IPINPWA PhylomeDB:P46601
Genevestigator:P46601 GermOnline:AT5G47370 Uniprot:P46601
Length = 283
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 42/142 (29%), Positives = 66/142 (46%)
Query: 4 PN-TFESHHMFDMTRRSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRY 62
PN T S + R S G DD++ T + D+++ RK+
Sbjct: 75 PNSTISSTISGKRSEREGISGTGVGSGDDHDEI--TPDRGYSRGTSDEEEDGGETSRKKL 132
Query: 63 HRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHEN 122
R ++ Q +E FKE + KQ+ L+++L L QV+ WFQN+R + K + +
Sbjct: 133 -RLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVWFQNRRARTKLKQTEVDC 191
Query: 123 QILKAENQKLRAENNRY-KEAL 143
+ LK +KL EN R KEA+
Sbjct: 192 EYLKRCVEKLTEENRRLQKEAM 213
>UNIPROTKB|E1BB15 [details] [associations]
symbol:GSC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0048644 "muscle organ morphogenesis"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=IEA] [GO:0023019 "signal transduction involved in
regulation of gene expression" evidence=IEA] [GO:0021904
"dorsal/ventral neural tube patterning" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0048644 GO:GO:0043565
GO:GO:0030900 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0000122 GO:GO:0048704 GO:GO:0030178
GO:GO:0021904 GO:GO:0023019 GO:GO:0042474 CTD:145258 KO:K09324
OMA:PVGPSCC GeneTree:ENSGT00700000104273 EMBL:DAAA02053078
IPI:IPI00718229 RefSeq:NP_001179315.1 UniGene:Bt.106434
Ensembl:ENSBTAT00000013736 GeneID:514862 KEGG:bta:514862
NextBio:20871542 Uniprot:E1BB15
Length = 257
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 56 HPKRKRYHR--HTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 113
H +RKR HR T Q++ +E F+E +PD R++L+R++ L +V+ WF+N+R +
Sbjct: 157 HCRRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKW 216
Query: 114 KAQHERHENQILKAE 128
+ Q + AE
Sbjct: 217 RRQKRSSSEESENAE 231
>UNIPROTKB|P56915 [details] [associations]
symbol:GSC "Homeobox protein goosecoid" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0021904 "dorsal/ventral neural tube patterning" evidence=IEA]
[GO:0023019 "signal transduction involved in regulation of gene
expression" evidence=IEA] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0048644 "muscle organ morphogenesis"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0007369 "gastrulation" evidence=NAS] [GO:0005634
"nucleus" evidence=NAS] [GO:0003677 "DNA binding" evidence=NAS]
[GO:0042474 "middle ear morphogenesis" evidence=ISS] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=ISS]
[GO:0001103 "RNA polymerase II repressing transcription factor
binding" evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0048644 GO:GO:0003677
GO:GO:0043565 GO:GO:0030900 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0048704
GO:GO:0030178 GO:GO:0007369 GO:GO:0021904 GO:GO:0023019
GO:GO:0001103 GO:GO:0042474 HOGENOM:HOG000112823 CTD:145258
eggNOG:NOG247162 HOVERGEN:HBG005921 KO:K09324 OrthoDB:EOG46Q6T9
OMA:PVGPSCC EMBL:AY177407 EMBL:BC063580 IPI:IPI00011923 PIR:A54677
RefSeq:NP_776248.1 UniGene:Hs.440438 PDB:2DMU PDBsum:2DMU
ProteinModelPortal:P56915 SMR:P56915 STRING:P56915
PhosphoSite:P56915 DMDM:61252078 PRIDE:P56915
Ensembl:ENST00000238558 GeneID:145258 KEGG:hsa:145258
UCSC:uc001ydu.3 GeneCards:GC14M095234 HGNC:HGNC:4612 MIM:138890
neXtProt:NX_P56915 PharmGKB:PA29004 InParanoid:P56915
PhylomeDB:P56915 EvolutionaryTrace:P56915 GenomeRNAi:145258
NextBio:85059 Bgee:P56915 CleanEx:HS_GSC Genevestigator:P56915
GermOnline:ENSG00000133937 Uniprot:P56915
Length = 257
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 56 HPKRKRYHR--HTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 113
H +RKR HR T Q++ +E F+E +PD R++L+R++ L +V+ WF+N+R +
Sbjct: 156 HCRRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKW 215
Query: 114 KAQHERHENQILKAE 128
+ Q + AE
Sbjct: 216 RRQKRSSSEESENAE 230
>UNIPROTKB|A1YEY5 [details] [associations]
symbol:GSC "Homeobox protein goosecoid" species:9595
"Gorilla gorilla gorilla" [GO:0042474 "middle ear morphogenesis"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042474 HOVERGEN:HBG005921
OrthoDB:EOG46Q6T9 EMBL:DQ976489 RefSeq:XP_004055692.1
ProteinModelPortal:A1YEY5 SMR:A1YEY5 GeneID:101153454 OMA:PVGPSCC
Uniprot:A1YEY5
Length = 257
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 56 HPKRKRYHR--HTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 113
H +RKR HR T Q++ +E F+E +PD R++L+R++ L +V+ WF+N+R +
Sbjct: 156 HCRRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKW 215
Query: 114 KAQHERHENQILKAE 128
+ Q + AE
Sbjct: 216 RRQKRSSSEESENAE 230
>UNIPROTKB|A1YFI3 [details] [associations]
symbol:GSC "Homeobox protein goosecoid" species:78454
"Saguinus labiatus" [GO:0042474 "middle ear morphogenesis"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042474 HOVERGEN:HBG005921
EMBL:DQ976992 ProteinModelPortal:A1YFI3 SMR:A1YFI3 Uniprot:A1YFI3
Length = 257
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 56 HPKRKRYHR--HTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 113
H +RKR HR T Q++ +E F+E +PD R++L+R++ L +V+ WF+N+R +
Sbjct: 156 HCRRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKW 215
Query: 114 KAQHERHENQILKAE 128
+ Q + AE
Sbjct: 216 RRQKRSSSEESENAE 230
>UNIPROTKB|A1YG57 [details] [associations]
symbol:GSC "Homeobox protein goosecoid" species:9597 "Pan
paniscus" [GO:0042474 "middle ear morphogenesis" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0042474 CTD:145258 HOVERGEN:HBG005921
KO:K09324 EMBL:DQ977221 RefSeq:XP_003832877.1
ProteinModelPortal:A1YG57 SMR:A1YG57 GeneID:100995285
KEGG:pps:100995285 Uniprot:A1YG57
Length = 257
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 56 HPKRKRYHR--HTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 113
H +RKR HR T Q++ +E F+E +PD R++L+R++ L +V+ WF+N+R +
Sbjct: 156 HCRRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKW 215
Query: 114 KAQHERHENQILKAE 128
+ Q + AE
Sbjct: 216 RRQKRSSSEESENAE 230
>UNIPROTKB|A2T733 [details] [associations]
symbol:GSC "Homeobox protein goosecoid" species:9598 "Pan
troglodytes" [GO:0042474 "middle ear morphogenesis" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0048644 GO:GO:0043565 GO:GO:0030900 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
GO:GO:0048704 GO:GO:0030178 GO:GO:0021904 GO:GO:0023019
GO:GO:0042474 HOGENOM:HOG000112823 CTD:145258 eggNOG:NOG247162
HOVERGEN:HBG005921 KO:K09324 OrthoDB:EOG46Q6T9 OMA:PVGPSCC
GeneTree:ENSGT00700000104273 EMBL:DQ977363 RefSeq:NP_001074955.1
UniGene:Ptr.6559 ProteinModelPortal:A2T733 SMR:A2T733
Ensembl:ENSPTRT00000012313 GeneID:467546 KEGG:ptr:467546
InParanoid:A2T733 NextBio:20845425 Uniprot:A2T733
Length = 257
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 56 HPKRKRYHR--HTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 113
H +RKR HR T Q++ +E F+E +PD R++L+R++ L +V+ WF+N+R +
Sbjct: 156 HCRRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKW 215
Query: 114 KAQHERHENQILKAE 128
+ Q + AE
Sbjct: 216 RRQKRSSSEESENAE 230
>UNIPROTKB|A2T7P4 [details] [associations]
symbol:GSC "Homeobox protein goosecoid" species:9600 "Pongo
pygmaeus" [GO:0042474 "middle ear morphogenesis" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0042474 HOGENOM:HOG000112823 eggNOG:NOG247162
HOVERGEN:HBG005921 OrthoDB:EOG46Q6T9 EMBL:DQ977514
ProteinModelPortal:A2T7P4 SMR:A2T7P4 InParanoid:A2T7P4
Uniprot:A2T7P4
Length = 257
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 56 HPKRKRYHR--HTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 113
H +RKR HR T Q++ +E F+E +PD R++L+R++ L +V+ WF+N+R +
Sbjct: 156 HCRRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKW 215
Query: 114 KAQHERHENQILKAE 128
+ Q + AE
Sbjct: 216 RRQKRSSSEESENAE 230
>UNIPROTKB|G3V5W7 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9606 "Homo
sapiens" [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000979
"RNA polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0001709 "cell fate determination" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0002052 "positive regulation
of neuroblast proliferation" evidence=IEA] [GO:0002088 "lens
development in camera-type eye" evidence=IEA] [GO:0003322
"pancreatic A cell development" evidence=IEA] [GO:0003680 "AT DNA
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0007435
"salivary gland morphogenesis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0009950
"dorsal/ventral axis specification" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0021778 "oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021796 "cerebral cortex
regionalization" evidence=IEA] [GO:0021797 "forebrain
anterior/posterior pattern specification" evidence=IEA] [GO:0021798
"forebrain dorsal/ventral pattern formation" evidence=IEA]
[GO:0021902 "commitment of neuronal cell to specific neuron type in
forebrain" evidence=IEA] [GO:0021905 "forebrain-midbrain boundary
formation" evidence=IEA] [GO:0021912 "regulation of transcription
from RNA polymerase II promoter involved in spinal cord motor
neuron fate specification" evidence=IEA] [GO:0021913 "regulation of
transcription from RNA polymerase II promoter involved in ventral
spinal cord interneuron specification" evidence=IEA] [GO:0021918
"regulation of transcription from RNA polymerase II promoter
involved in somatic motor neuron fate commitment" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA] [GO:0030902 "hindbrain development"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0032808 "lacrimal gland development"
evidence=IEA] [GO:0033365 "protein localization to organelle"
evidence=IEA] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0042660 "positive regulation of cell fate
specification" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048505 "regulation of timing of cell
differentiation" evidence=IEA] [GO:0048596 "embryonic camera-type
eye morphogenesis" evidence=IEA] [GO:0048708 "astrocyte
differentiation" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0070410 "co-SMAD
binding" evidence=IEA] [GO:0070412 "R-SMAD binding" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007411 GO:GO:0001764 GO:GO:0030216 GO:GO:0007435
GO:GO:0045944 GO:GO:0045665 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0030334 GO:GO:0000790 GO:GO:0006366 GO:GO:0000981
GO:GO:0033365 GO:GO:0021983 GO:GO:0050680 GO:GO:0000979
GO:GO:0030858 GO:GO:0007224 GO:GO:0001709 GO:GO:0002052
GO:GO:0009950 GO:GO:0021797 GO:GO:0048596 GO:GO:0023019
GO:GO:0002088 GO:GO:0042462 EMBL:Z83307 GO:GO:0021796 GO:GO:0021913
GO:GO:0032808 GO:GO:0021798 GO:GO:0048505 GO:GO:0021905
GO:GO:0048708 GO:GO:0021912 GO:GO:0021902 GO:GO:0021778
GO:GO:0003322 GO:GO:0021918 EMBL:Z95332 HGNC:HGNC:8620
ProteinModelPortal:G3V5W7 SMR:G3V5W7 Ensembl:ENST00000531910
ArrayExpress:G3V5W7 Bgee:G3V5W7 Uniprot:G3V5W7
Length = 162
Score = 112 (44.5 bits), Expect = 0.00015, P = 0.00015
Identities = 29/103 (28%), Positives = 52/103 (50%)
Query: 33 ETKSGTETMEMEAPSGDDQDPSQ---HPKRKRYHRHT---QRQIQEMEAFFKECPHPDDK 86
+ + G E + +G+D D +Q KRK T Q QI+ +E F+ +PD
Sbjct: 43 QQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVF 102
Query: 87 QRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAEN 129
R+ L+ ++ L +++ WF N+R + + + E+ NQ +A N
Sbjct: 103 ARERLAAKIDLPEARIQVWFSNRRAKWRRE-EKLRNQRRQASN 144
>ZFIN|ZDB-GENE-000823-8 [details] [associations]
symbol:hoxa11a "homeo box A11a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000823-8
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG286554 HOGENOM:HOG000231898
HOVERGEN:HBG052048 InterPro:IPR021918 Pfam:PF12045
OrthoDB:EOG4KKZ3X EMBL:CR382300 EMBL:AF071240 EMBL:AF287138
IPI:IPI00484931 RefSeq:NP_571619.1 UniGene:Dr.85394
ProteinModelPortal:Q9DDU0 SMR:Q9DDU0 GeneID:58061 KEGG:dre:58061
CTD:58061 NextBio:20892323 ArrayExpress:Q9DDU0 Uniprot:Q9DDU0
Length = 284
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 35/106 (33%), Positives = 55/106 (51%)
Query: 14 DMTRRSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQH----PK-RKRYHRHTQR 68
D S +S E E K ET E+ SG++++ + P+ RK+ +T+
Sbjct: 163 DKMHSSKQSTPAPAPEQQPEGKERPETSSPESSSGNNEEKTSGANSGPRFRKKRCPYTKF 222
Query: 69 QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 114
QI+E+E F + + ++R +LSR L L QVK WFQN+R + K
Sbjct: 223 QIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKMWFQNRRMKEK 268
>ZFIN|ZDB-GENE-990415-238 [details] [associations]
symbol:rx3 "retinal homeobox gene 3" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0048596
"embryonic camera-type eye morphogenesis" evidence=IMP] [GO:0030900
"forebrain development" evidence=IMP] [GO:0001654 "eye development"
evidence=IMP] [GO:0001755 "neural crest cell migration"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0021984 "adenohypophysis development"
evidence=IMP] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] [GO:0048593 "camera-type eye morphogenesis"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-238 GO:GO:0005634 GO:GO:0001708 GO:GO:0001755
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 HOGENOM:HOG000231518 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0021984 eggNOG:NOG261733
GO:GO:0048596 HOVERGEN:HBG021349 OrthoDB:EOG4V4387 KO:K09332
EMBL:AF001909 IPI:IPI00493738 RefSeq:NP_571302.1 UniGene:Dr.540
ProteinModelPortal:O42358 SMR:O42358 STRING:O42358 GeneID:30474
KEGG:dre:30474 CTD:30474 InParanoid:O42358 NextBio:20806867
ArrayExpress:O42358 Uniprot:O42358
Length = 292
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 26/84 (30%), Positives = 48/84 (57%)
Query: 49 DDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQN 108
DD++P + +R R T Q+ E+E F++ +PD R+EL+ ++ L ++V+ WFQN
Sbjct: 98 DDENPKKKHRRNRT-TFTTFQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQN 156
Query: 109 KRTQMKAQHERHENQILKAENQKL 132
+R + + Q + + I E+ L
Sbjct: 157 RRAKWRRQEKLEVSSIKLQESSML 180
>ZFIN|ZDB-GENE-980528-2060 [details] [associations]
symbol:gsc "goosecoid" species:7955 "Danio rerio"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009950
"dorsal/ventral axis specification" evidence=IEP] [GO:0007420
"brain development" evidence=IGI] [GO:0021999 "neural plate
anterior/posterior regionalization" evidence=IGI] [GO:0009953
"dorsal/ventral pattern formation" evidence=IGI;IDA] [GO:0009948
"anterior/posterior axis specification" evidence=IDA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980528-2060 GO:GO:0005634 GO:GO:0007420 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009948
GO:GO:0009950 GO:GO:0021999 HOVERGEN:HBG005921 OMA:PVGPSCC
GeneTree:ENSGT00700000104273 EMBL:AL772209 IPI:IPI00487794
UniGene:Dr.289 SMR:Q7ZZR4 Ensembl:ENSDART00000082085
InParanoid:Q7ZZR4 Uniprot:Q7ZZR4
Length = 240
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 26/78 (33%), Positives = 49/78 (62%)
Query: 56 HPKRKRYHR--HTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 113
H +RKR HR T Q++ +E F+E +PD R++L+R++ L +V+ WF+N+R +
Sbjct: 142 HCRRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKW 201
Query: 114 KAQHERHENQILKAENQK 131
+ Q +R ++ ++EN +
Sbjct: 202 RRQ-KRSSSE--ESENSQ 216
>UNIPROTKB|F1S229 [details] [associations]
symbol:LMX1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:CU179728
Ensembl:ENSSSCT00000006937 Uniprot:F1S229
Length = 295
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 56/216 (25%), Positives = 92/216 (42%)
Query: 22 SDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECP 81
SD GK +++ KS + AP D +D + PKR R TQ++ + +A F+
Sbjct: 76 SDSGKSDDEESLCKSAHGAGK-GAPE-DGKD-HKRPKRPRTILTTQQR-RAFKASFEVSS 131
Query: 82 HPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKLRAENNRYKE 141
P K R+ L+ E GL V+ WFQN+R +MK R + Q + + Q + N+
Sbjct: 132 KPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRQQQQ--QQDQQNTQRLNSAQTN 189
Query: 142 ALGNATCPNCGGPAALGEMSFDEQHLRIENARLREEIDRISGIAAKYVGKPLSSFPHLTP 201
G+ P + +Q L IE + + R G+ P H+ P
Sbjct: 190 GGGSVGMEGIMNPYTA--LPTPQQLLAIEQSVYNSDPFR-QGLTP-----PQMPGDHMHP 241
Query: 202 RSLDLGFTNLGTQSGFVGEMYGGCDLIRSISGPSEA 237
+ F +L + + + G C L S +GP ++
Sbjct: 242 YGAEPLFHDLDSDDTSLSNL-GDCFLATSEAGPLQS 276
>UNIPROTKB|Q8TE12 [details] [associations]
symbol:LMX1A "LIM homeobox transcription factor 1-alpha"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001558 "regulation of cell growth" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0021542 "dentate
gyrus development" evidence=IEA] [GO:0021549 "cerebellum
development" evidence=IEA] [GO:0021953 "central nervous system
neuron differentiation" evidence=IEA] [GO:0030901 "midbrain
development" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0071542 "dopaminergic
neuron differentiation" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0007411 GO:GO:0001558
GO:GO:0046872 GO:GO:0071542 GO:GO:0043565 GO:GO:0008270
GO:GO:0045665 EMBL:CH471067 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021549
GO:GO:0030901 GO:GO:0021542 HOGENOM:HOG000231629 GO:GO:0021953
EMBL:AY078398 EMBL:AY078391 EMBL:AY078392 EMBL:AY078393
EMBL:AY078394 EMBL:AY078395 EMBL:AY078396 EMBL:AY078397
EMBL:AK127724 EMBL:AL390730 EMBL:AL160058 EMBL:BC119743
EMBL:BC119744 IPI:IPI00152586 IPI:IPI00328299 RefSeq:NP_001167540.1
RefSeq:NP_796372.1 UniGene:Hs.667312 ProteinModelPortal:Q8TE12
SMR:Q8TE12 STRING:Q8TE12 PhosphoSite:Q8TE12 DMDM:27923801
PRIDE:Q8TE12 DNASU:4009 Ensembl:ENST00000294816
Ensembl:ENST00000342310 Ensembl:ENST00000367893 GeneID:4009
KEGG:hsa:4009 UCSC:uc001gcz.2 UCSC:uc021pdy.1 CTD:4009
GeneCards:GC01M165171 HGNC:HGNC:6653 HPA:HPA028051 HPA:HPA030088
MIM:600298 neXtProt:NX_Q8TE12 PharmGKB:PA30416 eggNOG:NOG243427
HOVERGEN:HBG052335 InParanoid:Q8TE12 KO:K09371 OMA:GNAGMEG
OrthoDB:EOG4QFWDN PhylomeDB:Q8TE12 GenomeRNAi:4009 NextBio:15724
ArrayExpress:Q8TE12 Bgee:Q8TE12 CleanEx:HS_LMX1A
Genevestigator:Q8TE12 GermOnline:ENSG00000162761 Uniprot:Q8TE12
Length = 382
Score = 124 (48.7 bits), Expect = 0.00017, P = 0.00017
Identities = 55/216 (25%), Positives = 91/216 (42%)
Query: 22 SDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECP 81
SD GK +++ KS + A G D + PKR R TQ++ + +A F+
Sbjct: 163 SDSGKSDDEESLCKSAHGAGKGTAEEGKDH---KRPKRPRTILTTQQR-RAFKASFEVSS 218
Query: 82 HPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKLRAENNRYKE 141
P K R+ L+ E GL V+ WFQN+R +MK R + Q + + Q + ++
Sbjct: 219 KPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRQQQQ--QQDQQNTQRLSSAQTN 276
Query: 142 ALGNATCPNCGGPAALGEMSFDEQHLRIENARLREEIDRISGIAAKYVGKPLSSFPHLTP 201
G+A P + +Q L IE + + R G+ P H+ P
Sbjct: 277 GGGSAGMEGIMNPYTA--LPTPQQLLAIEQSVYSSDPFR-QGLTP-----PQMPGDHMHP 328
Query: 202 RSLDLGFTNLGTQSGFVGEMYGGCDLIRSISGPSEA 237
+ F +L + + + G C L S +GP ++
Sbjct: 329 YGAEPLFHDLDSDDTSLSNL-GDCFLATSEAGPLQS 363
>UNIPROTKB|J9NW39 [details] [associations]
symbol:ARX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
EMBL:AAEX03026212 EMBL:AAEX03026213 Ensembl:ENSCAFT00000048909
Uniprot:J9NW39
Length = 520
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 29/93 (31%), Positives = 53/93 (56%)
Query: 27 LKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHR-HTQRQIQEMEAFFKECPHPDD 85
L +D E K G +++ + A S D ++ K++RY T Q++E+E F++ +PD
Sbjct: 255 LHPEDAEGKDGEDSVCLSAGS-DSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDV 313
Query: 86 KQRKELSRELGLEPLQVKFWFQNKRTQMKAQHE 118
R+EL+ L L +V+ WFQN+R + + + +
Sbjct: 314 FTREELAMRLDLTEARVQVWFQNRRAKWRKREK 346
>UNIPROTKB|G1K2Z3 [details] [associations]
symbol:PRRX1 "Paired mesoderm homeobox protein 1"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
OMA:WGSAAPY EMBL:AADN02033985 EMBL:AADN02033987 EMBL:AADN02033986
Ensembl:ENSGALT00000005264 Uniprot:G1K2Z3
Length = 245
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 26/97 (26%), Positives = 52/97 (53%)
Query: 36 SGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSREL 95
SG++T + + + ++ + +R+ Q+Q +E F+ +PD R++L+R +
Sbjct: 72 SGSDTPQQDNDQLNSEEKKKRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRV 131
Query: 96 GLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKL 132
L +V+ WFQN+R A+ R+E +L ++N L
Sbjct: 132 NLTEARVQVWFQNRR----AKFRRNERAMLASKNASL 164
>UNIPROTKB|P53545 [details] [associations]
symbol:GSC "Homeobox protein goosecoid" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000112823 EMBL:X70471 IPI:IPI00594603 PIR:A47539
RefSeq:NP_990662.1 UniGene:Gga.738 ProteinModelPortal:P53545
SMR:P53545 STRING:P53545 GeneID:396273 KEGG:gga:396273 CTD:145258
eggNOG:NOG247162 HOVERGEN:HBG005921 InParanoid:P53545 KO:K09324
OrthoDB:EOG46Q6T9 NextBio:20816324 Uniprot:P53545
Length = 245
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 28/79 (35%), Positives = 50/79 (63%)
Query: 56 HPKRKRYHR--HTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 113
H +RKR HR T Q++ +E F+E +PD R++L+R++ L +V+ WF+N+R +
Sbjct: 146 HCRRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKW 205
Query: 114 KAQHERHENQILKAEN-QK 131
+ Q +R ++ ++EN QK
Sbjct: 206 RRQ-KRSSSE--ESENAQK 221
>UNIPROTKB|Q05437 [details] [associations]
symbol:PRRX1 "Paired mesoderm homeobox protein 1"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 eggNOG:NOG267226
EMBL:D13433 EMBL:S69088 IPI:IPI00592701 PIR:I51226
RefSeq:NP_001007822.1 UniGene:Gga.1546 ProteinModelPortal:Q05437
SMR:Q05437 IntAct:Q05437 STRING:Q05437 GeneID:373941
KEGG:gga:373941 CTD:5396 HOVERGEN:HBG021349 InParanoid:Q05437
KO:K09329 OrthoDB:EOG4RR6J8 NextBio:20813473 Uniprot:Q05437
Length = 245
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 26/97 (26%), Positives = 52/97 (53%)
Query: 36 SGTETMEMEAPSGDDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSREL 95
SG++T + + + ++ + +R+ Q+Q +E F+ +PD R++L+R +
Sbjct: 72 SGSDTPQQDNDQLNSEEKKKRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRV 131
Query: 96 GLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKL 132
L +V+ WFQN+R A+ R+E +L ++N L
Sbjct: 132 NLTEARVQVWFQNRR----AKFRRNERAMLASKNASL 164
>TAIR|locus:2084228 [details] [associations]
symbol:HB-1 "homeobox 1" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
"response to blue light" evidence=IEP] [GO:0009651 "response to
salt stress" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0010167 "response
to nitrate" evidence=RCA] [GO:0015706 "nitrate transport"
evidence=RCA] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009965 "leaf morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0042803 GO:GO:0009651 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0009637 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009965 EMBL:AC009325 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:X58821 EMBL:AY058188 EMBL:AY098972
EMBL:M90416 IPI:IPI00536407 PIR:S16325 RefSeq:NP_186796.1
UniGene:At.41275 UniGene:At.47815 ProteinModelPortal:Q02283
SMR:Q02283 STRING:Q02283 EnsemblPlants:AT3G01470.1 GeneID:821138
KEGG:ath:AT3G01470 GeneFarm:3968 TAIR:At3g01470 eggNOG:NOG245596
InParanoid:Q02283 OMA:QVHLLEK PhylomeDB:Q02283
ProtClustDB:CLSN2684999 Genevestigator:Q02283 GermOnline:AT3G01470
Uniprot:Q02283
Length = 272
Score = 121 (47.7 bits), Expect = 0.00018, P = 0.00018
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 49 DDQDPSQHPKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQN 108
DD Q P++KR R T Q+ +E F+ + +++ +L+++LGL+P QV WFQN
Sbjct: 58 DDFYDDQLPEKKR--RLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQN 115
Query: 109 KRTQMKAQHERHENQILKAENQKL 132
+R + K + + +LK+ +L
Sbjct: 116 RRARWKTKQLERDYDLLKSTYDQL 139
>UNIPROTKB|F1RQG1 [details] [associations]
symbol:PRRX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
OMA:GVSMANS EMBL:CU915659 Ensembl:ENSSSCT00000006245 Uniprot:F1RQG1
Length = 211
Score = 118 (46.6 bits), Expect = 0.00018, P = 0.00018
Identities = 29/88 (32%), Positives = 50/88 (56%)
Query: 36 SGTET--MEMEAPSGDDQDPSQHPKRKRYHRHT--QRQIQEMEAFFKECPHPDDKQRKEL 91
SG+E + E PS ++ K++R +R T Q+Q +E F+ +PD R+EL
Sbjct: 36 SGSEAAPQDGECPSPGRGGAAKRKKKQRRNRTTFNSSQLQALERVFERTHYPDAFVREEL 95
Query: 92 SRELGLEPLQVKFWFQNKRTQMKAQHER 119
+R + L +V+ WFQN+R + + ++ER
Sbjct: 96 ARRVNLSEARVQVWFQNRRAKFR-RNER 122
>ZFIN|ZDB-GENE-980526-291 [details] [associations]
symbol:hoxb8b "homeo box B8b" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-980526-291
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 HOVERGEN:HBG016849
EMBL:AL645798 GeneTree:ENSGT00700000104332 EMBL:DQ060549
EMBL:AF071255 EMBL:Y14534 IPI:IPI00480876 RefSeq:NP_571256.1
UniGene:Dr.132197 ProteinModelPortal:Q8JH55 SMR:Q8JH55
Ensembl:ENSDART00000076154 GeneID:30420 KEGG:dre:30420 CTD:30420
eggNOG:NOG314669 InParanoid:Q8JH55 OrthoDB:EOG4H464V
NextBio:20806825 ArrayExpress:Q8JH55 Bgee:Q8JH55 Uniprot:Q8JH55
Length = 247
Score = 120 (47.3 bits), Expect = 0.00018, P = 0.00018
Identities = 34/119 (28%), Positives = 56/119 (47%)
Query: 21 ESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQHPKR--KRYHRHTQRQIQ--EMEAF 76
+SD + + + + + +E P P P+ +R R T + Q E+E
Sbjct: 104 DSDFTQFGDCNLKVSGIRDDLESAEPCTAQLFPWMRPQATGRRRGRQTYSRYQTLELEKE 163
Query: 77 FKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAENQKLRAE 135
F P+ K+R E+S L L QVK WFQN+R + K +H + + KAE +++ E
Sbjct: 164 FLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKEHNKDKFPSSKAEQEEIERE 222
>UNIPROTKB|D6RAR5 [details] [associations]
symbol:D6RAR5 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC004080
HOGENOM:HOG000294138 IPI:IPI00382764 ProteinModelPortal:D6RAR5
SMR:D6RAR5 Ensembl:ENST00000470747 Uniprot:D6RAR5
Length = 112
Score = 102 (41.0 bits), Expect = 0.00018, P = 0.00018
Identities = 34/108 (31%), Positives = 52/108 (48%)
Query: 12 MFDMTRRSSESDLGKLKEDDYETKSGTETMEMEAPSGDDQDPSQ---HPKRKRYHR--HT 66
M + R S+ G E++ E +SG + P D +P+ H + R R +T
Sbjct: 1 MCQVDREKQPSE-GAFSENNAENESGGDK-----PPIDPNNPAANWLHARSTRKKRCPYT 54
Query: 67 QRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 114
+ Q E+E F + +R E++R L L QVK WFQN+R +MK
Sbjct: 55 KHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMK 102
>UNIPROTKB|F1PN35 [details] [associations]
symbol:SIX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00540000070251 OMA:TASMFQL EMBL:AAEX03005765
Ensembl:ENSCAFT00000024751 Uniprot:F1PN35
Length = 308
Score = 122 (48.0 bits), Expect = 0.00018, P = 0.00018
Identities = 28/94 (29%), Positives = 52/94 (55%)
Query: 60 KRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKA---Q 116
++ H +R + ++ + P+P+ +++EL++ GL P QV WF+N+R + +A +
Sbjct: 191 QKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAAAK 250
Query: 117 HERHENQIL-KAENQKLRAENNRYKEALGNATCP 149
+ R + Q+L + + LRAE E LG A P
Sbjct: 251 NSRLQQQVLSQGSGRALRAEEEGTPEVLGAAASP 284
>RGD|1304985 [details] [associations]
symbol:Nkx2-4 "NK2 homeobox 4" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1304985 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104098 CTD:644524 KO:K09344 OMA:FSHSAMG
IPI:IPI00193898 RefSeq:XP_001055558.3 RefSeq:XP_345446.3
Ensembl:ENSRNOT00000016915 GeneID:366213 KEGG:rno:366213
UCSC:RGD:1304985 Uniprot:D3ZTX2
Length = 353
Score = 123 (48.4 bits), Expect = 0.00019, P = 0.00019
Identities = 28/72 (38%), Positives = 41/72 (56%)
Query: 57 PKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQ 116
P+RKR +Q Q+ E+E FK+ + +R+ L+ + L P QVK WFQN R +MK Q
Sbjct: 186 PRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQ 245
Query: 117 HERHENQILKAE 128
+ Q L+ E
Sbjct: 246 AKDKAAQQLQQE 257
>UNIPROTKB|Q96QS3 [details] [associations]
symbol:ARX "Homeobox protein ARX" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0021759 "globus
pallidus development" evidence=IEA] [GO:0021800 "cerebral cortex
tangential migration" evidence=IEA] [GO:0021831 "embryonic
olfactory bulb interneuron precursor migration" evidence=IEA]
[GO:0021846 "cell proliferation in forebrain" evidence=IEA]
[GO:0021853 "cerebral cortex GABAergic interneuron migration"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0046622 "positive regulation of organ growth"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0007411 GO:GO:0001764 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0042127 Orphanet:777 GO:GO:0046622 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 eggNOG:NOG313402 KO:K09452
HOGENOM:HOG000012381 HOVERGEN:HBG004285 EMBL:AY038071
IPI:IPI00045066 RefSeq:NP_620689.1 UniGene:Hs.300304
ProteinModelPortal:Q96QS3 SMR:Q96QS3 STRING:Q96QS3
PhosphoSite:Q96QS3 DMDM:27923733 PaxDb:Q96QS3 PRIDE:Q96QS3
Ensembl:ENST00000379044 GeneID:170302 KEGG:hsa:170302
UCSC:uc004dbp.4 CTD:170302 GeneCards:GC0XM025021 HGNC:HGNC:18060
MIM:300004 MIM:300215 MIM:300382 MIM:300419 MIM:308350 MIM:309510
neXtProt:NX_Q96QS3 Orphanet:1934 Orphanet:2508 Orphanet:94083
Orphanet:3175 Orphanet:3451 Orphanet:452 PharmGKB:PA25024
InParanoid:Q96QS3 OMA:VTHPEER PhylomeDB:Q96QS3 GenomeRNAi:170302
NextBio:88881 Bgee:Q96QS3 CleanEx:HS_ARX Genevestigator:Q96QS3
GermOnline:ENSG00000004848 GO:GO:0021846 GO:GO:0021853
GO:GO:0021800 GO:GO:0021831 GO:GO:0021759 Uniprot:Q96QS3
Length = 562
Score = 126 (49.4 bits), Expect = 0.00019, P = 0.00019
Identities = 29/93 (31%), Positives = 53/93 (56%)
Query: 27 LKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHR-HTQRQIQEMEAFFKECPHPDD 85
L +D E K G +++ + A S D ++ K++RY T Q++E+E F++ +PD
Sbjct: 297 LHPEDAEGKDGEDSVCLSAGS-DSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDV 355
Query: 86 KQRKELSRELGLEPLQVKFWFQNKRTQMKAQHE 118
R+EL+ L L +V+ WFQN+R + + + +
Sbjct: 356 FTREELAMRLDLTEARVQVWFQNRRAKWRKREK 388
>UNIPROTKB|Q9H2Z4 [details] [associations]
symbol:NKX2-4 "Homeobox protein Nkx-2.4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 EMBL:CH471133 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG328614
HOGENOM:HOG000231923 HOVERGEN:HBG006689 EMBL:AL158013 EMBL:AF202037
IPI:IPI00830084 RefSeq:NP_149416.1 UniGene:Hs.456662
ProteinModelPortal:Q9H2Z4 SMR:Q9H2Z4 STRING:Q9H2Z4 DMDM:206729913
PRIDE:Q9H2Z4 Ensembl:ENST00000351817 GeneID:644524 KEGG:hsa:644524
UCSC:uc010gcz.3 CTD:644524 GeneCards:GC20M021371 HGNC:HGNC:7837
MIM:607808 neXtProt:NX_Q9H2Z4 PharmGKB:PA31644 InParanoid:Q9H2Z4
KO:K09344 OMA:FSHSAMG PhylomeDB:Q9H2Z4 GenomeRNAi:644524
NextBio:116331 Bgee:Q9H2Z4 CleanEx:HS_NKX2-4 Genevestigator:Q9H2Z4
Uniprot:Q9H2Z4
Length = 354
Score = 123 (48.4 bits), Expect = 0.00019, P = 0.00019
Identities = 28/72 (38%), Positives = 41/72 (56%)
Query: 57 PKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQ 116
P+RKR +Q Q+ E+E FK+ + +R+ L+ + L P QVK WFQN R +MK Q
Sbjct: 188 PRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQ 247
Query: 117 HERHENQILKAE 128
+ Q L+ E
Sbjct: 248 AKDKAAQQLQQE 259
>MGI|MGI:97349 [details] [associations]
symbol:Nkx2-4 "NK2 transcription factor related, locus 4
(Drosophila)" species:10090 "Mus musculus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:97349 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG328614
GeneTree:ENSGT00700000104098 HOGENOM:HOG000231923
HOVERGEN:HBG006689 CTD:644524 KO:K09344 OMA:FSHSAMG EMBL:AF202038
EMBL:AF202039 EMBL:AL928876 IPI:IPI00111298 RefSeq:NP_075993.1
UniGene:Mm.315498 ProteinModelPortal:Q9EQM3 SMR:Q9EQM3
STRING:Q9EQM3 PaxDb:Q9EQM3 PRIDE:Q9EQM3 DNASU:228731
Ensembl:ENSMUST00000067020 GeneID:228731 KEGG:mmu:228731
UCSC:uc008mss.1 InParanoid:A2ATK2 NextBio:379096 Bgee:Q9EQM3
Genevestigator:Q9EQM3 GermOnline:ENSMUSG00000054160 Uniprot:Q9EQM3
Length = 354
Score = 123 (48.4 bits), Expect = 0.00019, P = 0.00019
Identities = 28/72 (38%), Positives = 41/72 (56%)
Query: 57 PKRKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQ 116
P+RKR +Q Q+ E+E FK+ + +R+ L+ + L P QVK WFQN R +MK Q
Sbjct: 187 PRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQ 246
Query: 117 HERHENQILKAE 128
+ Q L+ E
Sbjct: 247 AKDKAAQQLQQE 258
>UNIPROTKB|E2QVR4 [details] [associations]
symbol:ARX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 Ensembl:ENSCAFT00000021479 Uniprot:E2QVR4
Length = 564
Score = 126 (49.4 bits), Expect = 0.00019, P = 0.00019
Identities = 29/93 (31%), Positives = 53/93 (56%)
Query: 27 LKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHR-HTQRQIQEMEAFFKECPHPDD 85
L +D E K G +++ + A S D ++ K++RY T Q++E+E F++ +PD
Sbjct: 299 LHPEDAEGKDGEDSVCLSAGS-DSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDV 357
Query: 86 KQRKELSRELGLEPLQVKFWFQNKRTQMKAQHE 118
R+EL+ L L +V+ WFQN+R + + + +
Sbjct: 358 FTREELAMRLDLTEARVQVWFQNRRAKWRKREK 390
>MGI|MGI:1097716 [details] [associations]
symbol:Arx "aristaless related homeobox" species:10090 "Mus
musculus" [GO:0001764 "neuron migration" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IC] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IMP] [GO:0021759
"globus pallidus development" evidence=IMP] [GO:0021772 "olfactory
bulb development" evidence=IMP] [GO:0021800 "cerebral cortex
tangential migration" evidence=IMP] [GO:0021831 "embryonic
olfactory bulb interneuron precursor migration" evidence=IMP]
[GO:0021846 "cell proliferation in forebrain" evidence=IMP]
[GO:0021853 "cerebral cortex GABAergic interneuron migration"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0046622 "positive
regulation of organ growth" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:1097716 GO:GO:0005634
GO:GO:0007411 GO:GO:0001764 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042127
GO:GO:0046622 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
eggNOG:NOG313402 KO:K09452 GeneTree:ENSGT00700000104279
HOGENOM:HOG000012381 HOVERGEN:HBG004285 OrthoDB:EOG43TZW9
CTD:170302 GO:GO:0021846 GO:GO:0021853 GO:GO:0021800 GO:GO:0021831
GO:GO:0021759 EMBL:AB006103 EMBL:AB026674 EMBL:AL590876
EMBL:BC052033 IPI:IPI00126550 RefSeq:NP_031518.2 UniGene:Mm.275547
ProteinModelPortal:O35085 SMR:O35085 STRING:O35085
PhosphoSite:O35085 PRIDE:O35085 Ensembl:ENSMUST00000046565
Ensembl:ENSMUST00000113947 GeneID:11878 KEGG:mmu:11878
UCSC:uc009tsq.1 InParanoid:O35085 NextBio:279907 Bgee:O35085
CleanEx:MM_ARX Genevestigator:O35085 GermOnline:ENSMUSG00000035277
Uniprot:O35085
Length = 564
Score = 126 (49.4 bits), Expect = 0.00019, P = 0.00019
Identities = 29/93 (31%), Positives = 53/93 (56%)
Query: 27 LKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHR-HTQRQIQEMEAFFKECPHPDD 85
L +D E K G +++ + A S D ++ K++RY T Q++E+E F++ +PD
Sbjct: 299 LHPEDAEGKDGEDSVCLSAGS-DSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDV 357
Query: 86 KQRKELSRELGLEPLQVKFWFQNKRTQMKAQHE 118
R+EL+ L L +V+ WFQN+R + + + +
Sbjct: 358 FTREELAMRLDLTEARVQVWFQNRRAKWRKREK 390
>RGD|1562672 [details] [associations]
symbol:Arx "aristaless related homeobox" species:10116 "Rattus
norvegicus" [GO:0001764 "neuron migration" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007411 "axon guidance" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0021759 "globus pallidus
development" evidence=ISO] [GO:0021772 "olfactory bulb development"
evidence=ISO] [GO:0021800 "cerebral cortex tangential migration"
evidence=ISO] [GO:0021831 "embryonic olfactory bulb interneuron
precursor migration" evidence=ISO] [GO:0021846 "cell proliferation
in forebrain" evidence=ISO] [GO:0021853 "cerebral cortex GABAergic
interneuron migration" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0042127 "regulation of cell proliferation"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046622 "positive regulation of organ growth"
evidence=ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1562672 GO:GO:0005634 GO:GO:0007411 GO:GO:0001764
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0046622 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 eggNOG:NOG313402 KO:K09452
HOGENOM:HOG000012381 HOVERGEN:HBG004285 CTD:170302 GO:GO:0021846
GO:GO:0021853 GO:GO:0021800 GO:GO:0021831 GO:GO:0021759
EMBL:EF638804 IPI:IPI00858330 RefSeq:NP_001093644.1
UniGene:Rn.22484 ProteinModelPortal:A6YP92 SMR:A6YP92 STRING:A6YP92
GeneID:317268 KEGG:rno:317268 NextBio:671526 ArrayExpress:A6YP92
Genevestigator:A6YP92 Uniprot:A6YP92
Length = 566
Score = 126 (49.4 bits), Expect = 0.00019, P = 0.00019
Identities = 29/93 (31%), Positives = 53/93 (56%)
Query: 27 LKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHR-HTQRQIQEMEAFFKECPHPDD 85
L +D E K G +++ + A S D ++ K++RY T Q++E+E F++ +PD
Sbjct: 301 LHPEDAEGKDGEDSVCLSAGS-DSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDV 359
Query: 86 KQRKELSRELGLEPLQVKFWFQNKRTQMKAQHE 118
R+EL+ L L +V+ WFQN+R + + + +
Sbjct: 360 FTREELAMRLDLTEARVQVWFQNRRAKWRKREK 392
>UNIPROTKB|D4A5S8 [details] [associations]
symbol:Arx "Homeobox protein ARX" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 IPI:IPI00950113
Ensembl:ENSRNOT00000067410 ArrayExpress:D4A5S8 Uniprot:D4A5S8
Length = 566
Score = 126 (49.4 bits), Expect = 0.00019, P = 0.00019
Identities = 29/93 (31%), Positives = 53/93 (56%)
Query: 27 LKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHR-HTQRQIQEMEAFFKECPHPDD 85
L +D E K G +++ + A S D ++ K++RY T Q++E+E F++ +PD
Sbjct: 301 LHPEDAEGKDGEDSVCLSAGS-DSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDV 359
Query: 86 KQRKELSRELGLEPLQVKFWFQNKRTQMKAQHE 118
R+EL+ L L +V+ WFQN+R + + + +
Sbjct: 360 FTREELAMRLDLTEARVQVWFQNRRAKWRKREK 392
>UNIPROTKB|F1LQW2 [details] [associations]
symbol:Arx "Homeobox protein ARX" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1562672 GO:GO:0005634 GO:GO:0007411 GO:GO:0001764
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0042127 GO:GO:0046622 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104279 GO:GO:0021846
GO:GO:0021853 GO:GO:0021800 GO:GO:0021831 GO:GO:0021759
IPI:IPI00858330 Ensembl:ENSRNOT00000049655 ArrayExpress:F1LQW2
Uniprot:F1LQW2
Length = 566
Score = 126 (49.4 bits), Expect = 0.00019, P = 0.00019
Identities = 29/93 (31%), Positives = 53/93 (56%)
Query: 27 LKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHR-HTQRQIQEMEAFFKECPHPDD 85
L +D E K G +++ + A S D ++ K++RY T Q++E+E F++ +PD
Sbjct: 301 LHPEDAEGKDGEDSVCLSAGS-DSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDV 359
Query: 86 KQRKELSRELGLEPLQVKFWFQNKRTQMKAQHE 118
R+EL+ L L +V+ WFQN+R + + + +
Sbjct: 360 FTREELAMRLDLTEARVQVWFQNRRAKWRKREK 392
>UNIPROTKB|F6XTT5 [details] [associations]
symbol:ARX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
OMA:VTHPEER Ensembl:ENSCAFT00000021479 EMBL:AAEX03026212
EMBL:AAEX03026213 Uniprot:F6XTT5
Length = 574
Score = 126 (49.4 bits), Expect = 0.00019, P = 0.00019
Identities = 29/93 (31%), Positives = 53/93 (56%)
Query: 27 LKEDDYETKSGTETMEMEAPSGDDQDPSQHPKRKRYHR-HTQRQIQEMEAFFKECPHPDD 85
L +D E K G +++ + A S D ++ K++RY T Q++E+E F++ +PD
Sbjct: 309 LHPEDAEGKDGEDSVCLSAGS-DSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDV 367
Query: 86 KQRKELSRELGLEPLQVKFWFQNKRTQMKAQHE 118
R+EL+ L L +V+ WFQN+R + + + +
Sbjct: 368 FTREELAMRLDLTEARVQVWFQNRRAKWRKREK 400
>UNIPROTKB|Q9GMA3 [details] [associations]
symbol:VSX1 "Visual system homeobox 1" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060040 "retinal
bipolar neuron differentiation" evidence=IEA] [GO:0042551 "neuron
maturation" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0007601 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0050896 Gene3D:1.10.10.60
SUPFAM:SSF46689 GeneTree:ENSGT00700000104013 GO:GO:0060040
GO:GO:0042551 eggNOG:NOG237888 HOGENOM:HOG000115909
InterPro:IPR023339 PROSITE:PS51496 EMBL:AF251032 IPI:IPI00716722
RefSeq:NP_777192.1 UniGene:Bt.5555 ProteinModelPortal:Q9GMA3
SMR:Q9GMA3 PRIDE:Q9GMA3 Ensembl:ENSBTAT00000004329 GeneID:286802
KEGG:bta:286802 CTD:30813 HOVERGEN:HBG036251 InParanoid:Q9GMA3
KO:K09335 OMA:WGSDHLK OrthoDB:EOG4907B0 NextBio:20806456
Uniprot:Q9GMA3
Length = 365
Score = 123 (48.4 bits), Expect = 0.00020, P = 0.00020
Identities = 29/95 (30%), Positives = 51/95 (53%)
Query: 40 TMEMEAPSGDDQD----PSQHPKRKRYHR--HTQRQIQEMEAFFKECPHPDDKQRKELSR 93
T + ++PS D D P+ ++KR HR T Q++E+E F E +PD R+ L+
Sbjct: 140 TSDEDSPSEDRSDRKASPAPSKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAM 199
Query: 94 ELGLEPLQVKFWFQNKRTQMKAQHERHENQILKAE 128
+ L +++ WFQN+R + + + +R + AE
Sbjct: 200 KTELPEDRIQVWFQNRRAKWRKREKRWGGSSVMAE 234
>UNIPROTKB|F1SPD5 [details] [associations]
symbol:ARGFX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 OMA:MQDTQWE
GeneTree:ENSGT00700000104273 EMBL:CU861646
Ensembl:ENSSSCT00000013003 Uniprot:F1SPD5
Length = 236
Score = 119 (46.9 bits), Expect = 0.00020, P = 0.00020
Identities = 28/81 (34%), Positives = 44/81 (54%)
Query: 58 KRKRYHRHTQ---RQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 114
K K+ H T Q + +EA F PD +++L+ +L L VK WF+N+R +M+
Sbjct: 4 KWKKPHERTSFTHTQYEALEALFGYNMFPDKNLQRKLALKLNLPESTVKIWFRNRRFKMR 63
Query: 115 AQHERHENQILKAENQKLRAE 135
Q ++ + Q LK NQ L A+
Sbjct: 64 KQQQQKQQQSLKPPNQTLLAK 84
>UNIPROTKB|Q5J2F2 [details] [associations]
symbol:NKX2.5 "Transcription factor NKX2.5" species:9615
"Canis lupus familiaris" [GO:1901387 "positive regulation of
voltage-gated calcium channel activity" evidence=IEA] [GO:0090090
"negative regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0060971 "embryonic heart tube left/right pattern
formation" evidence=IEA] [GO:0060929 "atrioventricular node cell
fate commitment" evidence=IEA] [GO:0060928 "atrioventricular node
cell development" evidence=IEA] [GO:0060413 "atrial septum
morphogenesis" evidence=IEA] [GO:0060412 "ventricular septum
morphogenesis" evidence=IEA] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060261 "positive regulation of
transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IEA] [GO:0060048 "cardiac muscle contraction"
evidence=IEA] [GO:0060043 "regulation of cardiac muscle cell
proliferation" evidence=IEA] [GO:0060038 "cardiac muscle cell
proliferation" evidence=IEA] [GO:0060037 "pharyngeal system
development" evidence=IEA] [GO:0055117 "regulation of cardiac
muscle contraction" evidence=IEA] [GO:0055005 "ventricular cardiac
myofibril development" evidence=IEA] [GO:0051891 "positive
regulation of cardioblast differentiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045823 "positive regulation of heart contraction"
evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA] [GO:0045214 "sarcomere organization"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
[GO:0030509 "BMP signaling pathway" evidence=IEA] [GO:0030097
"hemopoiesis" evidence=IEA] [GO:0010832 "negative regulation of
myotube differentiation" evidence=IEA] [GO:0010765 "positive
regulation of sodium ion transport" evidence=IEA] [GO:0010736
"serum response element binding" evidence=IEA] [GO:0010735
"positive regulation of transcription via serum response element
binding" evidence=IEA] [GO:0010667 "negative regulation of cardiac
muscle cell apoptotic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007512 "adult
heart development" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003350 "pulmonary myocardium development" evidence=IEA]
[GO:0003342 "proepicardium development" evidence=IEA] [GO:0003285
"septum secundum development" evidence=IEA] [GO:0003278 "apoptotic
process involved in heart morphogenesis" evidence=IEA] [GO:0003222
"ventricular trabecula myocardium morphogenesis" evidence=IEA]
[GO:0003221 "right ventricular cardiac muscle tissue morphogenesis"
evidence=IEA] [GO:0003211 "cardiac ventricle formation"
evidence=IEA] [GO:0003168 "Purkinje myocyte differentiation"
evidence=IEA] [GO:0003166 "bundle of His development" evidence=IEA]
[GO:0003148 "outflow tract septum morphogenesis" evidence=IEA]
[GO:0001947 "heart looping" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0001190 "RNA polymerase II
transcription factor binding transcription factor activity involved
in positive regulation of transcription" evidence=IEA] [GO:0001104
"RNA polymerase II transcription cofactor activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005737 GO:GO:0008284
GO:GO:0043565 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0003705
GO:GO:0000122 GO:GO:0060048 GO:GO:0045214 GO:GO:0030509
GO:GO:0060037 GO:GO:0007512 GO:GO:0045666 GO:GO:0030097
GO:GO:0001570 GO:GO:0001190 GO:GO:0010765 GO:GO:0090090
GO:GO:0001947 GO:GO:0060070 GO:GO:0045823 GO:GO:0060347
GO:GO:0010832 GO:GO:0055117 GO:GO:0001104 GO:GO:0060413
GO:GO:0060971 GO:GO:0060412 GO:GO:0003278 GO:GO:0003222
GO:GO:0030878 GO:GO:0003148 GO:GO:0060043 GO:GO:0003221
GO:GO:0051891 GO:GO:0060261 GO:GO:0010667 eggNOG:NOG310976
GeneTree:ENSGT00700000104098 HOGENOM:HOG000231923 GO:GO:0003166
HOVERGEN:HBG006689 GO:GO:0060928 GO:GO:0055005 GO:GO:0003211
CTD:1482 KO:K09345 OrthoDB:EOG4K0QP6 OMA:YGGAACS GO:GO:0010736
GO:GO:0060929 GO:GO:0010735 GO:GO:0003342 GO:GO:0003350
GO:GO:0003168 GO:GO:0003285 EMBL:AAEX03003002 EMBL:AY527225
EMBL:DQ220791 EMBL:DQ350454 RefSeq:NP_001010959.1 UniGene:Cfa.16251
SMR:Q5J2F2 Ensembl:ENSCAFT00000048845 GeneID:489113 KEGG:cfa:489113
InParanoid:Q5J2F2 NextBio:20862333 Uniprot:Q5J2F2
Length = 322
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 33/104 (31%), Positives = 51/104 (49%)
Query: 17 RRSSESDLGK-LKEDDYETKSGTETMEMEAPSGDDQD-PSQHPKRKRYHRHTQRQIQEME 74
R + D K + D E S + +E+E P D + P +RK +Q Q+ E+E
Sbjct: 94 RAYGDPDTAKDPRADKKELCSLQKAVELEKPEADGAERPRARRRRKPRVLFSQAQVYELE 153
Query: 75 AFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHE 118
FK+ + +R +L+ L L QVK WFQN+R + K Q +
Sbjct: 154 RRFKQQRYLSAPERDQLASVLKLTSTQVKIWFQNRRYKCKRQRQ 197
>UNIPROTKB|J9NTV2 [details] [associations]
symbol:J9NTV2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 OMA:IVHFGCC EMBL:AAEX03000743
GeneTree:ENSGT00640000091698 Ensembl:ENSCAFT00000043913
Uniprot:J9NTV2
Length = 184
Score = 115 (45.5 bits), Expect = 0.00020, P = 0.00020
Identities = 22/87 (25%), Positives = 46/87 (52%)
Query: 47 SGDDQDPSQHPKRKRYHR--HTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKF 104
SG D +H K + R T++Q+ ++E F + P+P+ ++E++ +L + P ++
Sbjct: 10 SGTDLSKGKHQKHSQRKRTMFTEKQLADLECLFSKNPYPNPSLQREMASKLEIHPTVLQV 69
Query: 105 WFQNKRTQMKAQHERHENQILKAENQK 131
WF+N R ++K ++ +K K
Sbjct: 70 WFKNHRAKLKKAKQQLSAMEVKTSYSK 96
WARNING: HSPs involving 136 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.396 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 673 659 0.00097 120 3 11 22 0.41 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 386
No. of states in DFA: 625 (66 KB)
Total size of DFA: 374 KB (2184 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 60.58u 0.07s 60.65t Elapsed: 00:00:02
Total cpu time: 60.61u 0.07s 60.68t Elapsed: 00:00:02
Start: Sat May 11 10:40:49 2013 End: Sat May 11 10:40:51 2013
WARNINGS ISSUED: 2