BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045293
(89 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 9 MGLTPEEEQVKRYLKRYATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDG 68
MG E++ + + + DD+ GK+ + LK K+LG + + + + AD +GDG
Sbjct: 74 MGERDSREEIMKAFRLF-DDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADRDGDG 132
Query: 69 CVDEEEMNDLVKYT 82
V+EEE ++K T
Sbjct: 133 EVNEEEFFRIMKKT 146
Score = 32.7 bits (73), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 31/65 (47%)
Query: 10 GLTPEEEQVKRYLKRYATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGC 69
GLT E++Q R D G + ELKVA++ LG K+ + D +G G
Sbjct: 1 GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGT 60
Query: 70 VDEEE 74
+D EE
Sbjct: 61 IDFEE 65
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain
(T94-Y172) Of The Human Centrin 2 In Complex With A
Repeat Sequence Of Human Sfi1 (R641-T660)
Length = 79
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 28 DDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDEEEMNDLVKYT 82
DD+ GK+ + LK K+LG + + + + AD +GDG V E+E ++K T
Sbjct: 22 DDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKT 76
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%)
Query: 9 MGLTPEEEQVKRYLKRYATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDG 68
+GLT E++Q R D G + ELKVA++ LG K+ + D +G G
Sbjct: 22 VGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSG 81
Query: 69 CVDEEE 74
+D EE
Sbjct: 82 TIDFEE 87
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 34.7 bits (78), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDE 72
EEQ+ + + ++ DKDG + EL ++ LGL+ + + ++ D +G+G +D
Sbjct: 6 EEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDF 65
Query: 73 EEMNDLVKYTVKW 85
E ++ +K+
Sbjct: 66 PEFLTMMARIMKY 78
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 34.7 bits (78), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 EQVKRYLKRYATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDEEEM 75
E++ + K + DD+ GK+ + LK K+LG + + + + AD +GDG V E+E
Sbjct: 21 EEILKAFKLF-DDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEF 79
Query: 76 NDLVKYT 82
++K T
Sbjct: 80 LRIMKKT 86
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 28 DDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDEEEMNDLVKYT 82
DD+ GK+ + LK K+LG + + + + AD +GDG V E+E + K T
Sbjct: 115 DDETGKISFKNLKRVAKELGENLTDEELQEXIDEADRDGDGEVSEQEFLRIXKKT 169
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 33.9 bits (76), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%)
Query: 9 MGLTPEEEQVKRYLKRYATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDG 68
+GLT E++Q R D G + ELKVA++ LG K+ + D +G G
Sbjct: 20 VGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSG 79
Query: 69 CVDEEE 74
+D EE
Sbjct: 80 TIDFEE 85
Score = 29.6 bits (65), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 15 EEQVKRYLKRYATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDEEE 74
EE +K + R DD G + +L+ K+LG + + + + AD N D +DE+E
Sbjct: 101 EEILKAF--RLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDE 158
Query: 75 MNDLVKYT 82
++K T
Sbjct: 159 FIRIMKKT 166
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 33.1 bits (74), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 12 TPEE-EQVKRYLKRYATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCV 70
TP++ +R KR+ T+ DGK+ +EL ALK LG + +R + D +GDG +
Sbjct: 6 TPQDIADRERIFKRFDTN-GDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFI 63
Query: 71 DEEEMNDLVK 80
+E D +
Sbjct: 64 SFDEFTDFAR 73
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 33.1 bits (74), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 28 DDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDEEE 74
DD+ GK+ + LK K+LG + + + + AD +GDG V E+E
Sbjct: 90 DDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQE 136
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 33.1 bits (74), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +GDG +D
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 64
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 32.7 bits (73), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDE 72
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +GDG +D
Sbjct: 306 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 365
Query: 73 EEMNDLVKYTVKW 85
E ++ +K+
Sbjct: 366 PEFLTMMARKMKY 378
Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 9 MGLTPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHYADVNG 66
M T EE+++ + + DKDG + EL+ + +LG + + AD++G
Sbjct: 376 MKYTDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 432
Query: 67 DGCVDEEEM 75
DG V+ EE
Sbjct: 433 DGQVNYEEF 441
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 32.7 bits (73), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDE 72
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +GDG +D
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 366
Query: 73 EEMNDLVKYTVKW 85
E ++ +K+
Sbjct: 367 PEFLTMMARKMKY 379
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 9 MGLTPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHYADVNG 66
M T EE+++ + + DKDG + EL+ + +LG + + AD++G
Sbjct: 377 MKYTDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 433
Query: 67 DGCVDEEEM 75
DG V+ EE
Sbjct: 434 DGQVNYEEF 442
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 32.3 bits (72), Expect = 0.072, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 4 WVPKGMGLTPEEEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHY 61
W P LT EEQ+ + + ++ DKDG + EL ++ LG + + + ++
Sbjct: 289 WEPTRDQLT--EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE 346
Query: 62 ADVNGDGCVDEEE 74
D +GDG +D E
Sbjct: 347 VDADGDGTIDFPE 359
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 7 KGMGLTPEEEQVKRYLKRYATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNG 66
+ M T EE+++ + + D +G + EL+ + +LG + + AD++G
Sbjct: 366 RKMKDTDSEEEIREAFRVF-DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 424
Query: 67 DGCVDEEE 74
DG V+ EE
Sbjct: 425 DGQVNYEE 432
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 32.0 bits (71), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +GDG +D
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 64
Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 4 WVPKGMGLTPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHY 61
+ + M T EE+++ + + DKDG + EL+ + +LG + +
Sbjct: 71 MMARKMKDTDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 127
Query: 62 ADVNGDGCVDEEE 74
AD++GDG V+ EE
Sbjct: 128 ADIDGDGQVNYEE 140
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 32.0 bits (71), Expect = 0.083, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 7 KGMGLTPEEEQVKRYLKRYATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNG 66
+ M T EE+++ + + D +G + EL+ + +LG + + AD++G
Sbjct: 375 RKMKYTDSEEEIREAFRVF-DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 433
Query: 67 DGCVDEEE 74
DG V+ EE
Sbjct: 434 DGQVNYEE 441
Score = 29.6 bits (65), Expect = 0.44, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDE 72
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 366
Query: 73 EEMNDLVKYTVKW 85
E ++ +K+
Sbjct: 367 PEFLTMMARKMKY 379
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 32.0 bits (71), Expect = 0.084, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 7 KGMGLTPEEEQVKRYLKRYATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNG 66
+ M T EE+++ + + D +G + EL+ + +LG + + AD++G
Sbjct: 374 RKMKYTDSEEEIREAFRVF-DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 432
Query: 67 DGCVDEEE 74
DG V+ EE
Sbjct: 433 DGQVNYEE 440
Score = 31.6 bits (70), Expect = 0.13, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDE 72
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +GDG +D
Sbjct: 306 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 365
Query: 73 EEMNDLVKYTVKW 85
E ++ +K+
Sbjct: 366 PEFLTMMARKMKY 378
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 32.0 bits (71), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 12 TPEEEQVKRYLKRYATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
T EE++K K + D ++G + +EL+ + +LG + ++ + AD++GDG V+
Sbjct: 79 TDAEEELKEAFKVFDKD-QNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVN 137
Query: 72 EEE 74
EE
Sbjct: 138 YEE 140
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 32.0 bits (71), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 12 TPEEEQVKRYLKRYATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
T EE++K K + D ++G + +EL+ + +LG + ++ + AD++GDG V+
Sbjct: 5 TDAEEELKEAFKVFDKD-QNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVN 63
Query: 72 EEE 74
EE
Sbjct: 64 YEE 66
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 31.6 bits (70), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 4 WVPKGMGLTPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHY 61
+ + M T EE+++ + + DKDG + EL+ + +LG + + +
Sbjct: 72 MMARKMKDTDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIRE 128
Query: 62 ADVNGDGCVDEEE 74
AD++GDG V+ EE
Sbjct: 129 ADIDGDGQVNYEE 141
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 3 LWVPKGMGLTPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVH 60
L+ M T EE+++ + + +DKDG + EL+ + +LG + +
Sbjct: 16 LYFQSLMKDTDSEEEIR---EAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 72
Query: 61 YADVNGDGCVDEEE 74
AD++GDG V+ EE
Sbjct: 73 EADIDGDGQVNYEE 86
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 15 EEQVKRYLKRYATDDKD--GKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDE 72
EEQ+ + + +A DKD G + +EL ++ LGL S ++ DV+G+ ++
Sbjct: 7 EEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEF 66
Query: 73 EEMNDLVKYTVKW 85
E L+ +K
Sbjct: 67 SEFLALMSRQLKC 79
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + +A DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 6 EEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 14 EEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
E++ + ++ + D+DG + EL+ + +LG + + AD++GDG ++
Sbjct: 78 EQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHIN 137
Query: 72 EEE 74
EE
Sbjct: 138 YEE 140
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + +A DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 6 EEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 14 EEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
E++ + ++ + D+DG + EL+ + +LG + + AD++GDG ++
Sbjct: 78 EQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHIN 137
Query: 72 EEE 74
EE
Sbjct: 138 YEE 140
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 4 WVPKGMGLTPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHY 61
+ + M T EE++K + + DKDG + EL+ + +LG + +
Sbjct: 68 LMARKMKDTDSEEELKEAFRVF---DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRE 124
Query: 62 ADVNGDGCVDEEE 74
ADV+GDG V+ EE
Sbjct: 125 ADVDGDGQVNYEE 137
Score = 28.9 bits (63), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 14/59 (23%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
+EQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 3 DEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 61
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 4 WVPKGMGLTPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHY 61
+ + M T EE++K + + DKDG + EL+ + +LG + +
Sbjct: 71 LMARKMKDTDSEEELKEAFRVF---DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRE 127
Query: 62 ADVNGDGCVDEEE 74
ADV+GDG V+ EE
Sbjct: 128 ADVDGDGQVNYEE 140
Score = 28.5 bits (62), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 14/59 (23%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
+EQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 6 DEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 14 EEEQVKRYLKRYATDDKDGKLRWNELKVALKDLGLH-FSGFRAKRAVHYADVNGDGCVDE 72
+EE++ R K + + DG + ++E K ++ +G + + A+ AD +G+G +D
Sbjct: 6 DEEEILRAFKVFDAN-GDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDI 64
Query: 73 EEMNDLVKYT 82
E DL+K +
Sbjct: 65 PEFMDLIKKS 74
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 4 WVPKGMGLTPEEEQVKRYLKRYATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYAD 63
+ + M T EE++K + + D ++G + EL+ + +LG + + AD
Sbjct: 72 LMARKMKDTDSEEELKEAFRVFDKD-QNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 130
Query: 64 VNGDGCVDEEE 74
V+GDG ++ EE
Sbjct: 131 VDGDGQINYEE 141
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 4 WVPKGMGLTPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHY 61
+ + M T EE+++ + + DKDG + EL+ + +LG + +
Sbjct: 72 MMARKMKDTDSEEEIREAFRVF---DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRE 128
Query: 62 ADVNGDGCVDEEE 74
AD++GDG V+ EE
Sbjct: 129 ADIDGDGQVNYEE 141
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal
Domain Of Yeast Calmodulin
Length = 77
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 15 EEQVKRYLKRYATDDKD--GKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDE 72
EEQ+ + + +A DKD G + +EL ++ LGL S ++ DV+G+ ++
Sbjct: 6 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEF 65
Query: 73 EEMNDLVKYTVK 84
E L+ +K
Sbjct: 66 SEFLALMSRQLK 77
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 4 WVPKGMGLTPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHY 61
+ + M T EE+++ + + DKDG + EL+ + +LG + +
Sbjct: 72 MMARKMKDTDSEEEIREAFRVF---DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRE 128
Query: 62 ADVNGDGCVDEEE 74
AD++GDG V+ EE
Sbjct: 129 ADIDGDGQVNYEE 141
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 4 WVPKGMGLTPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHY 61
+ + M T EE+++ + + DKDG + EL+ + +LG + +
Sbjct: 75 MMARKMKDTDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 131
Query: 62 ADVNGDGCVDEEE 74
AD++GDG V+ EE
Sbjct: 132 ADIDGDGQVNYEE 144
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 10 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 68
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 4 WVPKGMGLTPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHY 61
+ + M T EE+++ + + DKDG + EL+ + +LG + +
Sbjct: 73 MMARKMKDTDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 129
Query: 62 ADVNGDGCVDEEE 74
AD++GDG V+ EE
Sbjct: 130 ADIDGDGQVNYEE 142
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 8 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 66
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 4 WVPKGMGLTPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHY 61
+ + M T EE+++ + + DKDG + EL+ + +LG + +
Sbjct: 71 MMARKMKDTDSEEEIREAFRVF---DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRE 127
Query: 62 ADVNGDGCVDEEE 74
AD++GDG V+ EE
Sbjct: 128 ADIDGDGQVNYEE 140
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 4 WVPKGMGLTPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHY 61
+ + M T EE+++ + + DKDG + EL+ + +LG + +
Sbjct: 72 MMARKMKDTDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIRE 128
Query: 62 ADVNGDGCVDEEE 74
AD++GDG V+ EE
Sbjct: 129 ADIDGDGQVNYEE 141
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 4 WVPKGMGLTPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHY 61
+ + M T EE+++ + + DKDG + EL+ + +LG + +
Sbjct: 71 MMARKMKDTDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIRE 127
Query: 62 ADVNGDGCVDEEE 74
AD++GDG V+ EE
Sbjct: 128 ADIDGDGQVNYEE 140
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 4 WVPKGMGLTPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHY 61
+ + M T EE+++ + + DKDG + EL+ + +LG + +
Sbjct: 72 MMARKMKDTDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 128
Query: 62 ADVNGDGCVDEEE 74
AD++GDG V+ EE
Sbjct: 129 ADIDGDGQVNYEE 141
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 4 WVPKGMGLTPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHY 61
+ + M T EE+++ + + DKDG + EL+ + +LG + +
Sbjct: 72 MMARKMKDTDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 128
Query: 62 ADVNGDGCVDEEE 74
AD++GDG V+ EE
Sbjct: 129 ADIDGDGQVNYEE 141
Score = 30.0 bits (66), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 4 WVPKGMGLTPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHY 61
+ + M T EE+++ + + DKDG + EL+ + +LG + +
Sbjct: 71 MMARKMKDTDSEEEIREAFRVF---DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRE 127
Query: 62 ADVNGDGCVDEEE 74
AD++GDG V+ EE
Sbjct: 128 ADIDGDGQVNYEE 140
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 4 WVPKGMGLTPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHY 61
+ + M T EE+++ + + DKDG + EL+ + +LG + +
Sbjct: 71 MMARKMKDTDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 127
Query: 62 ADVNGDGCVDEEE 74
AD++GDG V+ EE
Sbjct: 128 ADIDGDGQVNYEE 140
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 4 WVPKGMGLTPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHY 61
+ + M T EE+++ + + DKDG + EL+ + +LG + +
Sbjct: 72 MMARKMKDTDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 128
Query: 62 ADVNGDGCVDEEE 74
AD++GDG V+ EE
Sbjct: 129 ADIDGDGQVNYEE 141
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 4 WVPKGMGLTPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHY 61
+ + M T EE+++ + + DKDG + EL+ + +LG + +
Sbjct: 72 MMARKMKDTDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 128
Query: 62 ADVNGDGCVDEEE 74
AD++GDG V+ EE
Sbjct: 129 ADIDGDGQVNYEE 141
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 4 WVPKGMGLTPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHY 61
+ + M T EE+++ + + DKDG + EL+ + +LG + +
Sbjct: 69 MMARKMKDTDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 125
Query: 62 ADVNGDGCVDEEE 74
AD++GDG V+ EE
Sbjct: 126 ADIDGDGQVNYEE 138
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 62
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 4 WVPKGMGLTPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHY 61
+ + M T EE+++ + + DKDG + EL+ + +LG + +
Sbjct: 69 MMARKMKDTDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 125
Query: 62 ADVNGDGCVDEEE 74
AD++GDG V+ EE
Sbjct: 126 ADIDGDGQVNYEE 138
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 62
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 4 WVPKGMGLTPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHY 61
+ + M T EE+++ + + DKDG + EL+ + +LG + +
Sbjct: 68 MMARKMKDTDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 124
Query: 62 ADVNGDGCVDEEE 74
AD++GDG V+ EE
Sbjct: 125 ADIDGDGQVNYEE 137
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 3 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 61
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 4 WVPKGMGLTPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHY 61
+ + M T EE+++ + + DKDG + EL+ + +LG + +
Sbjct: 67 MMARKMKDTDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 123
Query: 62 ADVNGDGCVDEEE 74
AD++GDG V+ EE
Sbjct: 124 ADIDGDGQVNYEE 136
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 31.2 bits (69), Expect = 0.17, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 7 KGMGLTPEEEQVKRYLKRYATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNG 66
+ M T EE+++ + + D +G + EL+ + +LG + + AD++G
Sbjct: 376 RKMKDTDSEEEIREAFRVF-DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 434
Query: 67 DGCVDEEE 74
DG V+ EE
Sbjct: 435 DGQVNYEE 442
Score = 28.9 bits (63), Expect = 0.80, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDE 72
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 308 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 367
Query: 73 EEMNDLVKYTVK 84
E ++ +K
Sbjct: 368 PEFLTMMARKMK 379
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 4 WVPKGMGLTPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHY 61
+ + M T EE+++ + + DKDG + EL+ + +LG + +
Sbjct: 70 MMARKMKDTDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 126
Query: 62 ADVNGDGCVDEEE 74
AD++GDG V+ EE
Sbjct: 127 ADIDGDGQVNYEE 139
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 5 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 63
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 4 WVPKGMGLTPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHY 61
+ + M T EE+++ + + DKDG + EL+ + +LG + +
Sbjct: 77 MMARKMKDTDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 133
Query: 62 ADVNGDGCVDEEE 74
AD++GDG V+ EE
Sbjct: 134 ADIDGDGQVNYEE 146
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 12 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 70
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 4 WVPKGMGLTPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHY 61
+ + M T EE+++ + + DKDG + EL+ + +LG + +
Sbjct: 71 MMARKMKDTDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 127
Query: 62 ADVNGDGCVDEEE 74
AD++GDG V+ EE
Sbjct: 128 ADIDGDGQVNYEE 140
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 4 WVPKGMGLTPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHY 61
+ + M T EE+++ + + DKDG + EL+ + +LG + +
Sbjct: 69 MMARKMKDTDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 125
Query: 62 ADVNGDGCVDEEE 74
AD++GDG V+ EE
Sbjct: 126 ADIDGDGQVNYEE 138
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 62
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 4 WVPKGMGLTPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHY 61
+ + M T EE++K + + DKDG + EL+ + +LG + +
Sbjct: 71 LMARKMKDTDSEEKLKEAFRVF---DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRE 127
Query: 62 ADVNGDGCVDEEE 74
ADV+GDG V+ EE
Sbjct: 128 ADVDGDGQVNYEE 140
Score = 28.5 bits (62), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 14/59 (23%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
+EQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 6 DEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 30.8 bits (68), Expect = 0.19, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 7 KGMGLTPEEEQVKRYLKRYATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNG 66
+ M T EE+++ + + D +G + EL+ + +LG + + AD++G
Sbjct: 375 RKMKDTDSEEEIREAFRVF-DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 433
Query: 67 DGCVDEEE 74
DG V+ EE
Sbjct: 434 DGQVNYEE 441
Score = 28.5 bits (62), Expect = 0.89, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDE 72
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 366
Query: 73 EEMNDLVKYTVK 84
E ++ +K
Sbjct: 367 PEFLTMMARKMK 378
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 30.8 bits (68), Expect = 0.19, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 7 KGMGLTPEEEQVKRYLKRYATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNG 66
+ M T EE+++ + + D +G + EL+ + +LG + + AD++G
Sbjct: 374 RKMKDTDSEEEIREAFRVF-DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 432
Query: 67 DGCVDEEE 74
DG V+ EE
Sbjct: 433 DGQVNYEE 440
Score = 30.4 bits (67), Expect = 0.25, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDE 72
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +GDG +D
Sbjct: 306 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 365
Query: 73 EEMNDLVKYTVK 84
E ++ +K
Sbjct: 366 PEFLTMMARKMK 377
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 15 EEQVKRYLKRYATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDEEE 74
EE++K K + D ++G + +EL+ + +LG + ++ + AD++GDG V+ EE
Sbjct: 3 EEELKEAFKVFDKD-QNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEE 61
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 30.4 bits (67), Expect = 0.23, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 15 EEQVKRYLKRYATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDEEE 74
EE+V LK DK+G + ++E D + FS R +RA + D + G + +EE
Sbjct: 398 EEEVDNILKE-VDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEE 456
Query: 75 MNDLVKYT 82
+ +L T
Sbjct: 457 LANLFGLT 464
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 15 EEQVKRYLKRYATDDKD--GKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDE 72
EEQ+ + + +A DKD G + +EL ++ LGL S ++ DV+G+ ++
Sbjct: 6 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEF 65
Query: 73 EEMNDLVKYTVK 84
E L+ +K
Sbjct: 66 SEFLALMSRQLK 77
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor
State ( Crystal Form 2)
Length = 149
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Score = 30.0 bits (66), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 4 WVPKGMGLTPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHY 61
+ + M T EE+++ + + DKDG + EL+ + +LG + +
Sbjct: 72 MMARKMKDTDSEEEIREAFRVF---DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRE 128
Query: 62 ADVNGDGCVDEEE 74
+D++GDG V+ EE
Sbjct: 129 SDIDGDGQVNYEE 141
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Score = 29.6 bits (65), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 15 EEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDE 72
EE+++ + + DKDG + EL+ + +LG + + AD++GDG V+
Sbjct: 80 EEEIREAFRVF---DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 136
Query: 73 EE 74
EE
Sbjct: 137 EE 138
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 12 TPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGC 69
T EE+++ + + DKDG + EL+ + +LG + + AD++GDG
Sbjct: 346 TDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 402
Query: 70 VDEEEM 75
V+ EE
Sbjct: 403 VNYEEF 408
Score = 30.0 bits (66), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 273 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 331
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In
The Crystal Structure
Length = 142
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Query: 16 EQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDEE 73
E+++ + + DKDG + EL+ + +LG + + A+++GDG V+ E
Sbjct: 78 EEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYE 134
Query: 74 E 74
E
Sbjct: 135 E 135
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 15 EEQVKRYLKRYATDDKD--GKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDE 72
EEQ+ + + +A DKD G + +EL ++ LGL S ++ DV+G+ ++
Sbjct: 7 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEF 66
Query: 73 EEMNDLVKYTVK 84
E L+ +K
Sbjct: 67 SEFLALMSRQLK 78
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 12 TPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGC 69
T EE+++ + + DKDG + EL+ + +LG + + AD++GDG
Sbjct: 346 TDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 402
Query: 70 VDEEEM 75
V+ EE
Sbjct: 403 VNYEEF 408
Score = 30.0 bits (66), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 273 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 331
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Score = 29.3 bits (64), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 4 WVPKGMGLTPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHY 61
+ + M T EE+++ + + DKDG + EL+ + +LG + +
Sbjct: 71 MMARKMKDTDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 127
Query: 62 ADVNGDGCVDEEE 74
A+++GDG V+ EE
Sbjct: 128 ANIDGDGQVNYEE 140
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 12 TPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGC 69
T EE+++ + + DKDG + EL+ + +LG + + AD++GDG
Sbjct: 380 TDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 436
Query: 70 VDEEEM 75
V+ EE
Sbjct: 437 VNYEEF 442
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 365
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 15 EEQVKRYLKRYATDDKD--GKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDE 72
EEQ+ + + +A DKD G + +EL ++ LGL S ++ DV+G+ ++
Sbjct: 6 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEF 65
Query: 73 EEMNDLVKYTVK 84
E L+ +K
Sbjct: 66 SEFLALMSRQLK 77
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 12 TPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGC 69
T EE+++ + + DKDG + EL+ + +LG + + AD++GDG
Sbjct: 380 TDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 436
Query: 70 VDEEEM 75
V+ EE
Sbjct: 437 VNYEEF 442
Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 365
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 12 TPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGC 69
T EE+++ + + DKDG + EL+ + +LG + + AD++GDG
Sbjct: 343 TDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 399
Query: 70 VDEEEM 75
V+ EE
Sbjct: 400 VNYEEF 405
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL ++ LG + + + ++ D +G+G +D
Sbjct: 270 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 328
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 12 TPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGC 69
T EE+++ + + DKDG + EL+ + +LG + + AD++GDG
Sbjct: 1 TDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 57
Query: 70 VDEEE 74
V+ EE
Sbjct: 58 VNYEE 62
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin
Carboxy-Terminal Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 12 TPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGC 69
T EE+++ + + DKDG + EL+ + +LG + + AD++GDG
Sbjct: 4 TDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 60
Query: 70 VDEEE 74
V+ EE
Sbjct: 61 VNYEE 65
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From
Calmodulin To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 12 TPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGC 69
T EE+++ + + DKDG + EL+ + +LG + + AD++GDG
Sbjct: 2 TDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 58
Query: 70 VDEEE 74
V+ EE
Sbjct: 59 VNYEE 63
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin And 1mm Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin
Length = 74
Score = 30.4 bits (67), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 12 TPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGC 69
T EE+++ + + DKDG + EL+ + +LG + + AD++GDG
Sbjct: 5 TDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 61
Query: 70 VDEEE 74
V+ EE
Sbjct: 62 VNYEE 66
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 30.0 bits (66), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 31 DGKLRWNELKVALKDLGLHFSGFR-AKRAVHYADVNGDGCVDEEE 74
DG++ +EL+ A++ L H G R + + D+NGDG VD EE
Sbjct: 102 DGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 146
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 30.0 bits (66), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 31 DGKLRWNELKVALKDLGLHFSGFR-AKRAVHYADVNGDGCVDEEE 74
DG++ +EL+ A++ L H G R + + D+NGDG VD EE
Sbjct: 116 DGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 160
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With
Pyrophosphate
Length = 67
Score = 30.0 bits (66), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 12 TPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGC 69
T EE+++ + + DKDG + EL+ + +LG + + AD++GDG
Sbjct: 1 TDSEEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 57
Query: 70 VDEEE 74
V+ EE
Sbjct: 58 VNYEE 62
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 31 DGKLRWNELKVALKDLGLHFSGFR-AKRAVHYADVNGDGCVDEEE 74
DG++ +EL+ A++ L H G R + + D+NGDG VD EE
Sbjct: 102 DGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 146
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 4 WVPKGMGLTPEEEQVKRYLKRYATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYAD 63
+ + M T EE++K + + D ++G + EL+ + +LG + + AD
Sbjct: 72 LMARKMKDTDSEEELKEAFRVFDKD-QNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 130
Query: 64 VNGDGCVDEEE 74
V+GDG ++ +E
Sbjct: 131 VDGDGQINYDE 141
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 29.6 bits (65), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 5 VPKGMGLTPEEEQVKRYLKRYATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADV 64
+ K M T EE+++ K + D DG + EL+ + +LG + + AD
Sbjct: 72 MAKQMRETDTEEEMREAFKIFDRD-GDGFISPAELRFVMINLGEKVTDEEIDEMIREADF 130
Query: 65 NGDGCVDEEE 74
+GDG ++ EE
Sbjct: 131 DGDGMINYEE 140
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 29.6 bits (65), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 31 DGKLRWNELKVALKDLGLHFSGFR-AKRAVHYADVNGDGCVDEEE 74
DG++ +EL+ A++ L H G R + + D+NGDG VD EE
Sbjct: 21 DGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 65
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 29.6 bits (65), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 12 TPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGC 69
T EE+++ + + DKDG + EL+ +LG + + + AD++GDG
Sbjct: 80 TDSEEEIREAFRVF---DKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQ 136
Query: 70 VDEEEM 75
V+ EE
Sbjct: 137 VNYEEF 142
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL + LG + + + ++ D +G+G +D
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTID 65
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 29.3 bits (64), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 15 EEQVKRYLKRYATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDEEE 74
EE +K + R DD G + +L+ K+LG + + + + AD N D +DE+E
Sbjct: 9 EEILKAF--RLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDE 66
Query: 75 MNDLVKYT 82
++K T
Sbjct: 67 FIRIMKKT 74
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 29.3 bits (64), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 12 TPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGC 69
T EE+++ + + DKDG + EL+ +LG + + AD++GDG
Sbjct: 79 TDSEEEIREAFRVF---DKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQ 135
Query: 70 VDEEEM 75
V+ EE
Sbjct: 136 VNYEEF 141
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL + LG + + + ++ D +G+G +D
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTID 64
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 28.9 bits (63), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 16 EQVKRYLKRYATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDEEEM 75
+++KR + + DD GK+ L+ K+LG + + + D++GDG ++E E
Sbjct: 96 DEIKRAFQLF-DDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEF 154
Score = 25.0 bits (53), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 15 EEQVKRYLKRYATDD--KDGKLRWNELKVALKDLGLHF 50
EEQ + + ++ D DG L ++ELKVA+K LG
Sbjct: 19 EEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFEL 56
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 28.9 bits (63), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 15 EEQVKRYLKRYATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDEEE 74
EE++K + + D ++G + EL+ + +LG + + ADV+GDG ++ EE
Sbjct: 3 EEELKEAFRVFDKD-QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 61
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 28.9 bits (63), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 12 TPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGC 69
T EE+++ + + DKDG + EL+ +LG + + AD++GDG
Sbjct: 79 TDSEEEIREAFRVF---DKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQ 135
Query: 70 VDEEEM 75
V+ EE
Sbjct: 136 VNYEEF 141
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDG--KLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQ+ + + ++ DKDG + EL + LG + + + ++ D +G+G ++
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTIN 64
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 28.9 bits (63), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 16 EQVKRYLKRYATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDEEEM 75
+++KR + + DD GK+ L+ K+LG + + + D++GDG ++E E
Sbjct: 96 DEIKRAFQLF-DDDHTGKISIKNLRRVAKELGETLTDEELRAXIEEFDLDGDGEINENEF 154
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 28.9 bits (63), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 4 WVPKGMGLTPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHY 61
+ + M T EE+++ + + DKDG + EL+ + LG S +
Sbjct: 71 MMARKMKDTDNEEEIREAFRVF---DKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRA 127
Query: 62 ADVNGDGCVDEEE 74
AD +GDG V+ EE
Sbjct: 128 ADTDGDGQVNYEE 140
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 15 EEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
EEQV + + ++ DKDG + EL ++ LG + + + + D +G+G VD
Sbjct: 6 EEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVD 64
>pdb|1DJG|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Lanthanum
pdb|1DJG|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Lanthanum
pdb|1DJH|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Barium
pdb|1DJH|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Barium
pdb|1DJI|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Calcium
pdb|1DJI|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Calcium
pdb|1DJW|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-2-Methylene-1,2-Cyclic-
Monophosphonate
pdb|1DJW|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-2-Methylene-1,2-Cyclic-
Monophosphonate
pdb|1DJX|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-1,4,5-Trisphosphate
pdb|1DJX|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-1,4,5-Trisphosphate
pdb|1DJY|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-2,4,5-Trisphosphate
pdb|1DJY|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-2,4,5-Trisphosphate
pdb|1DJZ|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-4,5-Bisphosphate
pdb|1DJZ|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-4,5-Bisphosphate
pdb|2ISD|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat
pdb|2ISD|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat
Length = 624
Score = 28.5 bits (62), Expect = 0.91, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 24 RYATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDEEEMNDLVK 80
R A +KD K+ + ELK LK+L + A++ D + +++EE+ K
Sbjct: 18 RKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYK 74
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal
Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal
Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe
Bound With Er Alpha Peptide
Length = 67
Score = 28.5 bits (62), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 15 EEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDE 72
EE+++ + + DKDG + EL+ + +LG + + AD++GDG V+
Sbjct: 1 EEEIREAFRVF---DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 57
Query: 73 EE 74
EE
Sbjct: 58 EE 59
>pdb|1QAS|A Chain A, 1-Phosphatidylinositol-4,5-Bisphosphate
Phosphodiesterase Delta 1
pdb|1QAS|B Chain B, 1-Phosphatidylinositol-4,5-Bisphosphate
Phosphodiesterase Delta 1
pdb|1QAT|A Chain A, 1-Phosphatidylinositol-4,5-Bisphosphate
Phosphodiesterase Delta Complex With Samarium (Iii)
Chloride
pdb|1QAT|B Chain B, 1-Phosphatidylinositol-4,5-Bisphosphate
Phosphodiesterase Delta Complex With Samarium (Iii)
Chloride
Length = 622
Score = 28.5 bits (62), Expect = 0.94, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 24 RYATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDEEEMNDLVK 80
R A +KD K+ + ELK LK+L + A++ D + +++EE+ K
Sbjct: 16 RKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYK 72
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 12 TPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGC 69
TP E Q K L + DK+G ++ EL+ L +LG + + + V+GDG
Sbjct: 70 TPTE-QSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGA 128
Query: 70 VDEEEMNDLV 79
++ E D++
Sbjct: 129 INYESFVDML 138
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 19 KRYLKRYATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDEEEMNDL 78
+R KR+ + DGK+ EL ALK LG + K + D +GDG + +E D
Sbjct: 12 ERIFKRFDAN-GDGKISAAELGEALKTLG-SITPDEVKHMMAEIDTDGDGFISFQEFTDF 69
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 29 DKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDEEEMNDLVK 80
D +G + + + V L L + K A + D+N DGC+ +EEM ++K
Sbjct: 141 DGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMK 192
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 29 DKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDEEEM 75
DK G++ + ELK LK +G + ADV+ G +D +E
Sbjct: 39 DKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDNSGTIDYKEF 85
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 12 TPEEEQVKRYLKRYATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
T EE+ + + D+ DGK + LK +L G FS +A+ A ++G+G +D
Sbjct: 122 TDEEDVIVNAFNLF--DEGDGKCKEETLKRSLTTWGEKFSQDEVDQALSEAPIDGNGLID 179
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
Query: 29 DKDGKLRWNEL--------KVALKDLGLHFSGFRAKRAVHYADVNGDGCVDEEEMNDLVK 80
+ DGKL E+ LK G+ G +A D +G+G +DE E++ L+K
Sbjct: 159 NNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLK 218
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 12 TPEEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGC 69
T EE+++ + + DKDG + +L+ + +LG + + AD++GDG
Sbjct: 3 TDSEEEIREAFRVF---DKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 59
Query: 70 VDEEE 74
V+ E+
Sbjct: 60 VNYED 64
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 11 LTPEEEQ-VKRYLKRYATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGC 69
L+ E++Q +K + T+ K G + ++ELKVA++ LG ++ D G+G
Sbjct: 1 LSEEQKQEIKEAFDLFDTN-KTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGY 59
Query: 70 VDEEEMNDLVKYTVKWR 86
+ ++ D++ +K R
Sbjct: 60 IGFDDFLDIMTEKIKNR 76
>pdb|1CLC|A Chain A, Three-Dimensional Structure Of Endoglucanase D At 1.9
Angstroms Resolution
Length = 639
Score = 26.9 bits (58), Expect = 3.0, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 30/60 (50%)
Query: 25 YATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDEEEMNDLVKYTVK 84
Y + DGK+ +L + + + S + +A ADVN DG V+ ++ L +Y ++
Sbjct: 573 YGDVNDDGKVNSTDLTLLKRYVLKAVSTLPSSKAEKNADVNRDGRVNSSDVTILSRYLIR 632
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 10/18 (55%), Positives = 15/18 (83%)
Query: 63 DVNGDGCVDEEEMNDLVK 80
D+N DG +++EEM D+VK
Sbjct: 102 DINKDGYINKEEMMDIVK 119
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin
Bound To The Iq Motif Of Nav1.2
Length = 73
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 14 EEEQVKRYLKRYATDDKDGK--LRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVD 71
E++ + ++ + D+DG + EL+ + +LG + + AD++GDG ++
Sbjct: 3 EQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHIN 62
Query: 72 EEE 74
EE
Sbjct: 63 YEE 65
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 26.6 bits (57), Expect = 4.1, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 7 KGMGLTPEEEQVKRYLKRYATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNG 66
+ M T EE+++ + + D +G + +L+ + +LG + + A ++G
Sbjct: 375 RKMKDTDSEEEIREAFRVFGKDG-NGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGIDG 433
Query: 67 DGCVDEEE 74
DG V+ E+
Sbjct: 434 DGQVNYEQ 441
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Query: 29 DKDGKLRWNELKVALKDLGLH---FSGFRAKRAVHYADVNGDGCVDEEEMNDLVK 80
DK G + EL++ LK+ + K + D +GDG + EE LVK
Sbjct: 53 DKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 107
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 26.6 bits (57), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Query: 29 DKDGKLRWNELKVALKDLGLH---FSGFRAKRAVHYADVNGDGCVDEEEMNDLVK 80
DK G + EL++ LK+ + K + D +GDG + EE LVK
Sbjct: 54 DKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 26.2 bits (56), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 10/18 (55%), Positives = 15/18 (83%)
Query: 63 DVNGDGCVDEEEMNDLVK 80
D+N DG +++EEM D+VK
Sbjct: 99 DINKDGYINKEEMMDIVK 116
>pdb|4FL4|A Chain A, Scaffoldin Conformation And Dynamics Revealed By A
Ternary Complex From The Clostridium Thermocellum
Cellulosome
pdb|4FL4|D Chain D, Scaffoldin Conformation And Dynamics Revealed By A
Ternary Complex From The Clostridium Thermocellum
Cellulosome
pdb|4FL4|G Chain G, Scaffoldin Conformation And Dynamics Revealed By A
Ternary Complex From The Clostridium Thermocellum
Cellulosome
pdb|4FL4|J Chain J, Scaffoldin Conformation And Dynamics Revealed By A
Ternary Complex From The Clostridium Thermocellum
Cellulosome
Length = 88
Score = 26.2 bits (56), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 28/54 (51%)
Query: 31 DGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDEEEMNDLVKYTVK 84
DGK+ +L + + + S + +A ADVN DG V+ ++ L +Y ++
Sbjct: 28 DGKVNSTDLTLLKRYVLKAVSTLPSSKAEKNADVNRDGRVNSSDVTILSRYLIR 81
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/18 (55%), Positives = 15/18 (83%)
Query: 63 DVNGDGCVDEEEMNDLVK 80
D+N DG +++EEM D+VK
Sbjct: 135 DINKDGYINKEEMMDIVK 152
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 26.2 bits (56), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 10/18 (55%), Positives = 15/18 (83%)
Query: 63 DVNGDGCVDEEEMNDLVK 80
D+N DG +++EEM D+VK
Sbjct: 99 DINKDGYINKEEMMDIVK 116
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 25.8 bits (55), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Query: 29 DKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDEEEM 75
D DGKL E+ K G+ + V AD NGDG + EE
Sbjct: 87 DGDGKLTKEEVTSFFKKHGIE----KVAEQVMKADANGDGYITLEEF 129
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 25.8 bits (55), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Query: 29 DKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDEEEM 75
D DGKL E+ K G+ + V AD NGDG + EE
Sbjct: 17 DGDGKLTKEEVTSFFKKHGIE----KVAEQVMKADANGDGYITLEEF 59
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 25.8 bits (55), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Query: 29 DKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDEEEM 75
D DGKL E+ K G+ + V AD NGDG + EE
Sbjct: 87 DGDGKLTKEEVTSFFKKHGIE----KVAEQVMKADANGDGYITLEEF 129
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 25.8 bits (55), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 29 DKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDEEEM 75
D DG + +EL+ A+ LG + ADV+ DG V+ EE
Sbjct: 18 DGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEF 64
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 25.8 bits (55), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 11 LTPEEEQVKRYLKRYATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCV 70
L+ EE + L + D G + ++ELK LK +G K + AD++ G +
Sbjct: 4 LSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTI 63
Query: 71 D 71
D
Sbjct: 64 D 64
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 25.4 bits (54), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
Query: 29 DKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCVDEEEM 75
D DGKL E+ K G + + AD NGDG + EE
Sbjct: 87 DGDGKLTKEEVTTFFKKFGYE----KVVDQIMKADANGDGYITLEEF 129
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium
Regulatory Domain (Cld) From Soybean Calcium-Dependent
Protein Kinase- Alpha (Cdpk)
Length = 87
Score = 25.4 bits (54), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 11 LTPEEEQVKRYLKRYATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCV 70
L+ EE + L + D G + ++ELK LK +G K + AD++ G +
Sbjct: 17 LSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTI 76
Query: 71 D 71
D
Sbjct: 77 D 77
>pdb|1SNL|A Chain A, Nmr Solution Structure Of The Calcium-Binding Domain Of
Nucleobindin (Calnuc)
Length = 103
Score = 25.4 bits (54), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 47 GLHFSGFRAKRAVHYADVNGDGCVDEEEMNDL 78
GL + F K D+N DG +DE+E+ L
Sbjct: 14 GLDPNRFNPKTFFILHDINSDGVLDEQELEAL 45
>pdb|2CWW|A Chain A, Crystal Structure Of Thermus Thermophilus Ttha1280, A
Putative Sam- Dependent Rna Methyltransferase, In
Complex With S-Adenosyl-L- Homocysteine
pdb|2CWW|B Chain B, Crystal Structure Of Thermus Thermophilus Ttha1280, A
Putative Sam- Dependent Rna Methyltransferase, In
Complex With S-Adenosyl-L- Homocysteine
Length = 382
Score = 25.4 bits (54), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 1 MPLWVPKGMGLTPEEEQVKRYLKRYATDDKDGK 33
+PL+V +G PE QV+ RY D + G+
Sbjct: 158 LPLYVRPLLGEVPERVQVQEGRVRYLVDLRAGQ 190
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 25.0 bits (53), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 27/61 (44%)
Query: 11 LTPEEEQVKRYLKRYATDDKDGKLRWNELKVALKDLGLHFSGFRAKRAVHYADVNGDGCV 70
LT E++Q R D G + ELKVA++ LG K+ + D G G +
Sbjct: 25 LTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKM 84
Query: 71 D 71
+
Sbjct: 85 N 85
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.137 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,159,990
Number of Sequences: 62578
Number of extensions: 121465
Number of successful extensions: 658
Number of sequences better than 100.0: 151
Number of HSP's better than 100.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 406
Number of HSP's gapped (non-prelim): 239
length of query: 89
length of database: 14,973,337
effective HSP length: 56
effective length of query: 33
effective length of database: 11,468,969
effective search space: 378475977
effective search space used: 378475977
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 45 (21.9 bits)