BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>045305
MANVSCTCLFFILMIFSHELCDVEGRNLKISKSLKCAKCLLSPDGQSKFKPIARDTNNHD
ASPSLLHHGTKTTEGFVDAFRPTTPGHSPGVGH

High Scoring Gene Products

Symbol, full name Information P value
AT5G66815 protein from Arabidopsis thaliana 8.1e-05
AT5G66816 protein from Arabidopsis thaliana 8.1e-05
AT1G47485 protein from Arabidopsis thaliana 0.00017
AT2G23440 protein from Arabidopsis thaliana 0.00045

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  045305
        (93 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006719 - symbol:AT5G66815 "AT5G66815" speci...    94  8.1e-05   1
TAIR|locus:4515103770 - symbol:AT5G66816 "AT5G66816" spec...    94  8.1e-05   1
TAIR|locus:505006171 - symbol:AT1G47485 "AT1G47485" speci...    91  0.00017   1
TAIR|locus:2046798 - symbol:AT2G23440 "AT2G23440" species...    87  0.00045   1


>TAIR|locus:505006719 [details] [associations]
            symbol:AT5G66815 "AT5G66815" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002688
            GenomeReviews:BA000015_GR HOGENOM:HOG000090622 EMBL:BT029249
            IPI:IPI00531828 RefSeq:NP_569039.1 UniGene:At.28847
            EnsemblPlants:AT5G66815.1 GeneID:836815 KEGG:ath:AT5G66815
            TAIR:At5g66815 eggNOG:NOG284437 InParanoid:Q058G9 OMA:KTMMALA
            PhylomeDB:Q058G9 ProtClustDB:CLSN2917797 Genevestigator:Q058G9
            Uniprot:Q058G9
        Length = 105

 Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
 Identities = 31/92 (33%), Positives = 43/92 (46%)

Query:     8 CLFFILMIFSHELCDVEGRNLKISKSLKC----AKCLLSPDGQSKFKPIARDTNNHDASP 63
             C F +L+ F    C V GR LK+   +      +K +++    +K   +  D      SP
Sbjct:    14 CYFLMLVFFLGFNC-VHGRTLKVDDKINGGHYDSKTMMA---LAKHNDMMVDDKAMQFSP 69

Query:    64 SLLHHGTKTTEGFVDA--FRPTTPGHSPGVGH 93
                     +  G  DA  FRPTTPGHSPG+GH
Sbjct:    70 PP-PPPPPSQSGGKDAEDFRPTTPGHSPGIGH 100


>TAIR|locus:4515103770 [details] [associations]
            symbol:AT5G66816 "AT5G66816" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AB010700 IPI:IPI00891314
            RefSeq:NP_001119514.1 UniGene:At.69397 EnsemblPlants:AT5G66816.1
            GeneID:6240245 KEGG:ath:AT5G66816 TAIR:At5g66816 eggNOG:NOG254740
            HOGENOM:HOG000064618 OMA:MKENEEN PhylomeDB:B3H5A9
            ProtClustDB:CLSN2925627 Genevestigator:B3H5A9 Uniprot:B3H5A9
        Length = 101

 Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
 Identities = 19/35 (54%), Positives = 22/35 (62%)

Query:    62 SPSLLHHGTKTTE---GFVDAFRPTTPGHSPGVGH 93
             SP + H   +  E   G+ D F PTTPGHSPGVGH
Sbjct:    58 SPGIGHKMKENEENAGGYKDDFEPTTPGHSPGVGH 92


>TAIR|locus:505006171 [details] [associations]
            symbol:AT1G47485 "AT1G47485" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0048364 "root development"
            evidence=IMP] [GO:0048527 "lateral root development" evidence=IEP]
            EMBL:CP002684 GO:GO:0048527 EMBL:AY088738 EMBL:DQ446335
            EMBL:AB333778 IPI:IPI00546605 RefSeq:NP_564508.1 UniGene:At.38618
            EnsemblPlants:AT1G47485.1 GeneID:841156 KEGG:ath:AT1G47485
            TAIR:At1g47485 OMA:HGIQDTE PhylomeDB:Q8L8Y3 ProtClustDB:CLSN2917174
            Genevestigator:Q8L8Y3 Uniprot:Q8L8Y3
        Length = 91

 Score = 91 (37.1 bits), Expect = 0.00017, P = 0.00017
 Identities = 29/94 (30%), Positives = 44/94 (46%)

Query:     1 MANVSC-TCLFFILMIFSHELCDVEGRNLKISKSLKCAKCLLSPDGQSKFKPIARDTNNH 59
             M+N S  T +FF+ ++  H + D E R+LK + SL+        + +     +   T   
Sbjct:     3 MSNRSVSTSIFFLALVVLHGIQDTEERHLKTT-SLEIEGIYKKTEAEHP-SIVVTYTRRG 60

Query:    60 DASPSLLHHGTKTTEGFVDAFRPTTPGHSPGVGH 93
                  ++ H T         FRPT PG+SPGVGH
Sbjct:    61 VLQKEVIAHPTD--------FRPTNPGNSPGVGH 86


>TAIR|locus:2046798 [details] [associations]
            symbol:AT2G23440 "AT2G23440" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:AC003040 EMBL:CP002685 GenomeReviews:CT485783_GR
            EMBL:BT010787 EMBL:BT011268 IPI:IPI00525039 PIR:T01133
            RefSeq:NP_179925.1 UniGene:At.39291 EnsemblPlants:AT2G23440.1
            GeneID:816876 KEGG:ath:AT2G23440 TAIR:At2g23440 eggNOG:NOG318455
            HOGENOM:HOG000090622 OMA:ATINVYV PhylomeDB:O80460
            ProtClustDB:CLSN2913304 ArrayExpress:O80460 Genevestigator:O80460
            Uniprot:O80460
        Length = 82

 Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
 Identities = 14/17 (82%), Positives = 15/17 (88%)

Query:    77 VDAFRPTTPGHSPGVGH 93
             VD FRPT PGHSPG+GH
Sbjct:    62 VDTFRPTEPGHSPGIGH 78


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.136   0.432    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       93        93   0.00091  102 3  11 22  0.48    29
                                                     29  0.41    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  522 (56 KB)
  Total size of DFA:  113 KB (2076 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.04u 0.11s 12.15t   Elapsed:  00:00:00
  Total cpu time:  12.04u 0.11s 12.15t   Elapsed:  00:00:00
  Start:  Sat May 11 11:32:38 2013   End:  Sat May 11 11:32:38 2013

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