Query 045313
Match_columns 234
No_of_seqs 187 out of 1121
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 11:58:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045313.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045313hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03156 GDSL esterase/lipase; 100.0 2.6E-46 5.6E-51 331.6 18.8 189 11-216 154-346 (351)
2 cd01837 SGNH_plant_lipase_like 100.0 3.9E-46 8.5E-51 326.6 18.6 189 11-216 125-315 (315)
3 cd01847 Triacylglycerol_lipase 100.0 1.7E-42 3.8E-47 299.0 17.6 175 12-214 100-279 (281)
4 PRK15381 pathogenicity island 100.0 1.9E-39 4.1E-44 290.4 18.3 165 14-214 235-399 (408)
5 cd01846 fatty_acyltransferase_ 100.0 1.2E-38 2.5E-43 273.0 15.7 173 12-214 97-269 (270)
6 COG3240 Phospholipase/lecithin 100.0 9.5E-29 2.1E-33 214.6 11.8 174 12-215 159-332 (370)
7 PF00657 Lipase_GDSL: GDSL-lik 99.9 5.3E-21 1.2E-25 158.3 11.8 148 11-212 79-234 (234)
8 cd01834 SGNH_hydrolase_like_2 99.1 4.3E-09 9.3E-14 84.6 12.8 127 16-215 63-191 (191)
9 cd01833 XynB_like SGNH_hydrola 98.9 1E-08 2.3E-13 80.3 10.1 116 14-215 40-156 (157)
10 cd01841 NnaC_like NnaC (CMP-Ne 98.9 1.4E-08 2.9E-13 81.0 10.2 120 15-214 52-172 (174)
11 cd00229 SGNH_hydrolase SGNH_hy 98.9 2.2E-08 4.9E-13 78.1 10.7 123 12-214 63-186 (187)
12 cd01839 SGNH_arylesterase_like 98.9 1.7E-08 3.7E-13 83.0 9.6 119 14-214 79-203 (208)
13 cd01836 FeeA_FeeB_like SGNH_hy 98.9 3.3E-08 7.1E-13 80.0 11.1 120 14-214 67-187 (191)
14 cd04506 SGNH_hydrolase_YpmR_li 98.8 1.2E-07 2.6E-12 77.5 14.1 131 14-214 68-203 (204)
15 cd01828 sialate_O-acetylestera 98.8 4.3E-08 9.2E-13 77.9 11.0 117 14-214 48-166 (169)
16 cd01830 XynE_like SGNH_hydrola 98.8 2.1E-08 4.5E-13 82.4 9.2 56 16-74 76-131 (204)
17 cd01829 SGNH_hydrolase_peri2 S 98.8 2.6E-08 5.6E-13 81.1 9.2 135 15-214 60-196 (200)
18 cd01838 Isoamyl_acetate_hydrol 98.8 3.5E-08 7.5E-13 79.8 9.7 133 14-214 63-197 (199)
19 cd01823 SEST_like SEST_like. A 98.8 1.7E-07 3.7E-12 79.6 13.5 157 15-214 81-258 (259)
20 PF13472 Lipase_GDSL_2: GDSL-l 98.7 9.3E-08 2E-12 75.0 10.1 94 14-136 61-154 (179)
21 cd04501 SGNH_hydrolase_like_4 98.7 1.2E-07 2.5E-12 76.2 10.6 122 15-214 60-181 (183)
22 cd01821 Rhamnogalacturan_acety 98.7 8.9E-08 1.9E-12 78.1 9.8 131 14-214 65-196 (198)
23 cd01824 Phospholipase_B_like P 98.7 1.9E-07 4.2E-12 81.1 12.3 151 16-215 121-282 (288)
24 cd01820 PAF_acetylesterase_lik 98.7 1.5E-07 3.2E-12 77.9 10.8 118 15-214 90-208 (214)
25 cd04502 SGNH_hydrolase_like_7 98.7 3E-07 6.5E-12 73.2 12.0 119 14-214 50-169 (171)
26 cd01832 SGNH_hydrolase_like_1 98.7 2.3E-07 5E-12 74.5 10.2 117 14-214 67-184 (185)
27 cd01844 SGNH_hydrolase_like_6 98.6 9.5E-07 2.1E-11 70.8 11.8 118 14-214 57-175 (177)
28 cd01825 SGNH_hydrolase_peri1 S 98.5 3.5E-07 7.5E-12 73.5 7.6 126 15-214 57-183 (189)
29 cd01835 SGNH_hydrolase_like_3 98.5 6E-07 1.3E-11 72.8 8.6 123 14-214 69-191 (193)
30 PRK10528 multifunctional acyl- 98.5 8.4E-07 1.8E-11 72.3 9.0 43 15-67 72-114 (191)
31 cd01827 sialate_O-acetylestera 98.5 1.7E-06 3.6E-11 69.7 10.6 118 15-215 68-186 (188)
32 cd01826 acyloxyacyl_hydrolase_ 98.4 4E-06 8.7E-11 72.6 11.9 55 16-73 124-180 (305)
33 cd01840 SGNH_hydrolase_yrhL_li 98.3 3.1E-06 6.8E-11 66.2 8.9 22 193-214 127-148 (150)
34 cd01822 Lysophospholipase_L1_l 98.3 4.9E-06 1.1E-10 66.1 9.8 47 14-71 64-110 (177)
35 cd01831 Endoglucanase_E_like E 98.2 1.4E-05 3E-10 63.6 9.3 21 194-214 146-166 (169)
36 KOG3035 Isoamyl acetate-hydrol 98.1 7.4E-06 1.6E-10 67.1 7.1 146 3-214 57-206 (245)
37 COG2755 TesA Lysophospholipase 97.7 0.00025 5.5E-09 58.3 9.5 21 195-215 187-207 (216)
38 COG2845 Uncharacterized protei 96.4 0.02 4.3E-07 50.0 8.6 135 15-214 178-315 (354)
39 KOG3670 Phospholipase [Lipid t 96.1 0.14 3E-06 46.0 12.2 52 15-68 185-236 (397)
40 PF14606 Lipase_GDSL_3: GDSL-l 95.7 0.059 1.3E-06 43.5 7.6 116 14-214 59-175 (178)
41 cd01842 SGNH_hydrolase_like_5 93.6 1.9 4.2E-05 34.7 11.3 20 195-214 161-180 (183)
42 COG3240 Phospholipase/lecithin 90.8 0.33 7E-06 43.4 4.1 71 12-82 96-166 (370)
43 PLN02757 sirohydrochlorine fer 87.1 1.8 3.8E-05 34.1 5.5 64 49-140 59-125 (154)
44 PF02633 Creatininase: Creatin 83.6 8.1 0.00018 32.3 8.4 62 45-138 83-144 (237)
45 cd03416 CbiX_SirB_N Sirohydroc 78.6 3.9 8.5E-05 29.2 4.2 54 49-130 45-98 (101)
46 cd00384 ALAD_PBGS Porphobilino 77.0 9.1 0.0002 33.6 6.5 64 45-131 48-111 (314)
47 PRK13384 delta-aminolevulinic 76.8 8.8 0.00019 33.7 6.4 64 45-131 58-121 (322)
48 cd04824 eu_ALAD_PBGS_cysteine_ 76.3 8.8 0.00019 33.7 6.2 66 45-131 48-114 (320)
49 PF01903 CbiX: CbiX; InterPro 75.0 2.1 4.5E-05 30.8 1.8 56 50-133 39-94 (105)
50 cd04823 ALAD_PBGS_aspartate_ri 74.2 11 0.00023 33.2 6.3 66 45-131 51-116 (320)
51 PRK09283 delta-aminolevulinic 72.4 13 0.00028 32.8 6.3 64 45-131 56-119 (323)
52 PF08885 GSCFA: GSCFA family; 72.2 24 0.00052 30.1 7.9 111 13-140 100-227 (251)
53 PF00490 ALAD: Delta-aminolevu 72.1 15 0.00033 32.4 6.7 65 46-131 55-119 (324)
54 cd03414 CbiX_SirB_C Sirohydroc 65.8 23 0.00049 25.8 5.8 52 49-130 46-97 (117)
55 cd03412 CbiK_N Anaerobic cobal 60.4 33 0.00072 25.8 5.9 53 47-130 55-107 (127)
56 PF06908 DUF1273: Protein of u 59.9 27 0.00059 28.1 5.6 57 43-132 24-80 (177)
57 COG0113 HemB Delta-aminolevuli 59.6 25 0.00054 30.9 5.5 66 45-131 58-123 (330)
58 PRK13660 hypothetical protein; 58.4 61 0.0013 26.2 7.4 60 43-135 24-83 (182)
59 KOG2794 Delta-aminolevulinic a 56.6 19 0.00041 31.1 4.2 66 45-131 66-131 (340)
60 PF08029 HisG_C: HisG, C-termi 55.2 12 0.00026 25.7 2.4 21 50-70 52-72 (75)
61 PF13839 PC-Esterase: GDSL/SGN 51.2 95 0.0021 25.6 7.9 110 14-139 100-221 (263)
62 COG3581 Uncharacterized protei 51.0 29 0.00063 31.5 4.7 47 56-132 327-373 (420)
63 TIGR03455 HisG_C-term ATP phos 50.9 21 0.00045 25.9 3.2 23 48-70 74-96 (100)
64 TIGR01417 PTS_I_fam phosphoeno 45.7 64 0.0014 30.9 6.5 15 16-30 444-458 (565)
65 PRK13717 conjugal transfer pro 44.9 52 0.0011 25.0 4.6 26 96-121 70-95 (128)
66 cd00419 Ferrochelatase_C Ferro 44.6 85 0.0018 23.9 5.9 19 50-68 79-97 (135)
67 COG4474 Uncharacterized protei 43.3 1.7E+02 0.0038 23.4 7.7 58 43-133 24-81 (180)
68 PF02896 PEP-utilizers_C: PEP- 41.7 44 0.00095 29.2 4.4 15 17-31 198-212 (293)
69 PF04914 DltD_C: DltD C-termin 40.6 24 0.00053 26.9 2.3 24 190-213 101-124 (130)
70 TIGR02744 TrbI_Ftype type-F co 37.2 82 0.0018 23.4 4.5 26 96-121 57-82 (112)
71 PRK11177 phosphoenolpyruvate-p 37.0 97 0.0021 29.8 6.2 16 16-31 445-460 (575)
72 COG3605 PtsP Signal transducti 36.1 28 0.00061 33.5 2.4 19 13-31 616-634 (756)
73 TIGR01091 upp uracil phosphori 35.6 1.2E+02 0.0026 24.8 5.9 50 47-133 135-184 (207)
74 PF09907 DUF2136: Uncharacteri 35.4 16 0.00036 25.1 0.6 27 4-30 25-51 (76)
75 PF06812 ImpA-rel_N: ImpA-rela 33.6 17 0.00036 23.7 0.4 8 194-201 53-60 (62)
76 cd03411 Ferrochelatase_N Ferro 32.4 54 0.0012 25.5 3.2 23 50-72 101-123 (159)
77 PF05141 DIT1_PvcA: Pyoverdine 32.3 1.2E+02 0.0027 26.2 5.6 69 45-136 43-111 (278)
78 COG1402 Uncharacterized protei 32.3 66 0.0014 27.5 3.9 25 45-69 87-111 (250)
79 COG1080 PtsA Phosphoenolpyruva 31.9 57 0.0012 31.2 3.7 47 15-61 445-497 (574)
80 KOG4079 Putative mitochondrial 31.7 21 0.00046 27.5 0.7 17 59-75 42-58 (169)
81 cd03413 CbiK_C Anaerobic cobal 30.3 61 0.0013 23.4 3.0 19 50-68 44-62 (103)
82 TIGR01828 pyru_phos_dikin pyru 29.6 79 0.0017 32.0 4.5 16 17-32 755-770 (856)
83 PRK10128 2-keto-3-deoxy-L-rham 28.8 2.2E+02 0.0047 24.5 6.5 43 15-62 168-211 (267)
84 cd03415 CbiX_CbiC Archaeal sir 28.5 65 0.0014 24.3 2.9 20 49-68 45-64 (125)
85 COG0276 HemH Protoheme ferro-l 28.3 2E+02 0.0043 25.5 6.3 91 50-141 104-201 (320)
86 COG3836 HpcH 2,4-dihydroxyhept 27.0 2.4E+02 0.0053 24.0 6.2 35 17-51 169-206 (255)
87 PRK00129 upp uracil phosphorib 26.9 2E+02 0.0044 23.4 5.9 24 47-70 137-160 (209)
88 PF08331 DUF1730: Domain of un 26.0 1.7E+02 0.0038 19.8 4.5 60 60-125 9-71 (78)
89 PRK11061 fused phosphoenolpyru 25.6 84 0.0018 31.2 3.9 15 17-31 612-626 (748)
90 TIGR01418 PEP_synth phosphoeno 24.3 2.3E+02 0.0049 28.4 6.6 47 17-63 685-737 (782)
91 PRK09279 pyruvate phosphate di 24.0 1.4E+02 0.003 30.4 5.0 17 17-33 761-777 (879)
92 cd03409 Chelatase_Class_II Cla 23.5 1.2E+02 0.0025 21.1 3.4 21 50-70 47-67 (101)
93 cd04506 SGNH_hydrolase_YpmR_li 23.3 2.1E+02 0.0045 22.6 5.2 33 100-132 98-130 (204)
94 COG1182 AcpD Acyl carrier prot 22.6 1.2E+02 0.0026 25.0 3.6 27 107-133 19-45 (202)
95 COG4531 ZnuA ABC-type Zn2+ tra 22.4 2.5E+02 0.0054 24.5 5.6 45 100-150 183-231 (318)
96 PRK06464 phosphoenolpyruvate s 22.0 2.7E+02 0.0058 28.0 6.6 46 17-62 692-743 (795)
97 TIGR03239 GarL 2-dehydro-3-deo 21.7 3.6E+02 0.0078 22.8 6.5 42 16-62 162-204 (249)
98 TIGR02311 HpaI 2,4-dihydroxyhe 21.4 3.4E+02 0.0074 22.9 6.3 16 16-31 163-178 (249)
99 cd01823 SEST_like SEST_like. A 21.3 1.8E+02 0.0038 24.1 4.6 37 99-135 122-158 (259)
100 PRK09240 thiH thiamine biosynt 21.3 3.1E+02 0.0066 24.6 6.4 24 46-69 105-128 (371)
101 TIGR02351 thiH thiazole biosyn 21.1 2.8E+02 0.006 24.8 6.0 23 47-69 105-127 (366)
102 PF09677 TrbI_Ftype: Type-F co 21.1 2.5E+02 0.0054 20.7 4.8 25 97-121 57-81 (111)
103 PRK10558 alpha-dehydro-beta-de 21.1 3.7E+02 0.0081 22.8 6.5 42 16-62 169-211 (256)
104 PF12872 OST-HTH: OST-HTH/LOTU 21.0 1.3E+02 0.0027 19.7 3.0 27 125-151 23-51 (74)
105 PRK00035 hemH ferrochelatase; 21.0 2.2E+02 0.0047 25.0 5.3 44 50-112 250-293 (333)
106 PRK00923 sirohydrochlorin coba 20.9 1.1E+02 0.0024 22.5 3.0 20 49-68 47-66 (126)
107 COG4053 Uncharacterized protei 20.5 4.9E+02 0.011 21.4 9.1 27 45-71 23-49 (244)
108 TIGR00175 mito_nad_idh isocitr 20.5 1.4E+02 0.0031 26.5 4.0 39 108-146 180-218 (333)
109 KOG0907 Thioredoxin [Posttrans 20.3 1.5E+02 0.0031 21.6 3.4 32 108-140 37-68 (106)
110 PRK00489 hisG ATP phosphoribos 20.2 1.1E+02 0.0024 26.2 3.2 23 48-70 260-282 (287)
No 1
>PLN03156 GDSL esterase/lipase; Provisional
Probab=100.00 E-value=2.6e-46 Score=331.65 Aligned_cols=189 Identities=30% Similarity=0.527 Sum_probs=163.8
Q ss_pred cccCceeEEEEechhhhhHhhcC---C-ChhhHHhhHHHHHHHHHHHHHHHHHhCCceEEEecCCCCCCccchhhhccCC
Q 045313 11 DYFSKGLYTFDIGQNDLAGAFYS---K-TIDQVLASIPKILEEFETGLRRLYDEGARNFWIHNTGPLGCLAQNVAKFGTD 86 (234)
Q Consensus 11 ~~~~~sL~~i~iG~ND~~~~~~~---~-~~~~~~~~v~~~i~~~~~~i~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~ 86 (234)
++++++||+||||+|||+..++. . ....+.++++.+++.+.+.|++||++|||+|+|+|+||+||+|..+....
T Consensus 154 ~~~~~sL~~i~iG~NDy~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~~~~~~~-- 231 (351)
T PLN03156 154 EIISEALYLISIGTNDFLENYYTFPGRRSQYTVSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPLERTTNL-- 231 (351)
T ss_pred HHHhcCeEEEEecchhHHHHhhccccccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHHHHhhcC--
Confidence 56789999999999999865421 1 11245678999999999999999999999999999999999998765421
Q ss_pred cCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHHHHHHHcccCCCccccccccccccCCcCCCCC
Q 045313 87 LSMLDELGCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIKYSLIANYSRYGFEQPIMACCGVGGAPLNYNS 166 (234)
Q Consensus 87 ~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~n~~~ 166 (234)
.+..+|.+.+|.++..||++|++++++|++++|+++|+++|+|+++.++++||++|||++++++||+.| .|+ .
T Consensus 232 ---~~~~~C~~~~n~~~~~~N~~L~~~l~~L~~~~pg~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCCg~g--~~~--~ 304 (351)
T PLN03156 232 ---MGGSECVEEYNDVALEFNGKLEKLVTKLNKELPGIKLVFSNPYDIFMQIIRNPSAYGFEVTSVACCATG--MFE--M 304 (351)
T ss_pred ---CCCCCchHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEehHHHHHHHHhCccccCcccCCccccCCC--CCC--C
Confidence 124589999999999999999999999999999999999999999999999999999999999999865 554 4
Q ss_pred CcccCCCcccCCcccccccCCCCCCceeccCCChhHHHHHHHHHHHhcCC
Q 045313 167 GISCGQTKVINGTSVTAKACSDSTEYVNWDGIHYTEAANQYVSTQILTGK 216 (234)
Q Consensus 167 ~~~C~~~~~~~~~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~~ 216 (234)
...|++. ....|.+|++|+|||++|||+++|+++|+.++++.
T Consensus 305 ~~~C~~~--------~~~~C~~p~~yvfWD~~HPTe~a~~~iA~~~~~~l 346 (351)
T PLN03156 305 GYLCNRN--------NPFTCSDADKYVFWDSFHPTEKTNQIIANHVVKTL 346 (351)
T ss_pred ccccCCC--------CCCccCCccceEEecCCCchHHHHHHHHHHHHHHH
Confidence 6789862 22489999999999999999999999999999863
No 2
>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=100.00 E-value=3.9e-46 Score=326.59 Aligned_cols=189 Identities=38% Similarity=0.751 Sum_probs=165.0
Q ss_pred cccCceeEEEEechhhhhHhhcCCC--hhhHHhhHHHHHHHHHHHHHHHHHhCCceEEEecCCCCCCccchhhhccCCcC
Q 045313 11 DYFSKGLYTFDIGQNDLAGAFYSKT--IDQVLASIPKILEEFETGLRRLYDEGARNFWIHNTGPLGCLAQNVAKFGTDLS 88 (234)
Q Consensus 11 ~~~~~sL~~i~iG~ND~~~~~~~~~--~~~~~~~v~~~i~~~~~~i~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~ 88 (234)
.+.+++||+||||+|||+..+.... ..+..++++.+++++.++|++||++|||+|+|+|+||+||+|..+....
T Consensus 125 ~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~i~~~v~~L~~~GAr~~~v~~lpplgc~P~~~~~~~---- 200 (315)
T cd01837 125 DILSKSLFLISIGSNDYLNNYFANPTRQYEVEAYVPFLVSNISSAIKRLYDLGARKFVVPGLGPLGCLPSQRTLFG---- 200 (315)
T ss_pred HHHhCCEEEEEecccccHHHHhcCccccCCHHHHHHHHHHHHHHHHHHHHhCCCcEEEecCCCCcCccHHHHhhcC----
Confidence 5689999999999999987653221 2345678999999999999999999999999999999999999876531
Q ss_pred CCCCCCccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHHHHHHHcccCCCccccccccccccCCcCCCCCCc
Q 045313 89 MLDELGCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIKYSLIANYSRYGFEQPIMACCGVGGAPLNYNSGI 168 (234)
Q Consensus 89 ~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~n~~~~~ 168 (234)
.+..+|.+.+|+++..||.+|+++|++|++++|+++|+++|+|.++.++++||++|||+++.++||+.| .++ ...
T Consensus 201 -~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~y~~~~~i~~np~~yGf~~~~~aCc~~g--~~~--~~~ 275 (315)
T cd01837 201 -GDGGGCLEELNELARLFNAKLKKLLAELRRELPGAKFVYADIYNALLDLIQNPAKYGFENTLKACCGTG--GPE--GGL 275 (315)
T ss_pred -CCCCCcCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEehhHHHHHHHhChhhcCCcCCCcCccCCC--CCC--ccc
Confidence 124589999999999999999999999999999999999999999999999999999999999999866 332 345
Q ss_pred ccCCCcccCCcccccccCCCCCCceeccCCChhHHHHHHHHHHHhcCC
Q 045313 169 SCGQTKVINGTSVTAKACSDSTEYVNWDGIHYTEAANQYVSTQILTGK 216 (234)
Q Consensus 169 ~C~~~~~~~~~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~~ 216 (234)
.|+.. ...+|.+|++|+|||++|||+++|++||+.+++|.
T Consensus 276 ~c~~~--------~~~~C~~p~~y~fwD~~HpT~~~~~~ia~~~~~g~ 315 (315)
T cd01837 276 LCNPC--------GSTVCPDPSKYVFWDGVHPTEAANRIIADALLSGP 315 (315)
T ss_pred ccCCC--------CCCcCCCccceEEeCCCChHHHHHHHHHHHHhcCC
Confidence 67652 23689999999999999999999999999999874
No 3
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions.
Probab=100.00 E-value=1.7e-42 Score=298.97 Aligned_cols=175 Identities=23% Similarity=0.346 Sum_probs=151.3
Q ss_pred ccCceeEEEEechhhhhHhhcCCC-----hhhHHhhHHHHHHHHHHHHHHHHHhCCceEEEecCCCCCCccchhhhccCC
Q 045313 12 YFSKGLYTFDIGQNDLAGAFYSKT-----IDQVLASIPKILEEFETGLRRLYDEGARNFWIHNTGPLGCLAQNVAKFGTD 86 (234)
Q Consensus 12 ~~~~sL~~i~iG~ND~~~~~~~~~-----~~~~~~~v~~~i~~~~~~i~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~ 86 (234)
+.+++||+||||+|||+..+.... ..++.++++.+++++.++|++|++.|||+|+|+|+||+||+|..+...
T Consensus 100 ~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~GAr~ilv~~lpplgc~P~~~~~~--- 176 (281)
T cd01847 100 FDPNALYTVWIGGNDLIAALAALTTATTTQAAAVAAAATAAADLASQVKNLLDAGARYILVPNLPDVSYTPEAAGTP--- 176 (281)
T ss_pred CCCCeEEEEecChhHHHHHHhhccccccchhhHHHHHHHHHHHHHHHHHHHHHCCCCEEEEeCCCCcccCcchhhcc---
Confidence 578999999999999997653221 234568899999999999999999999999999999999999887642
Q ss_pred cCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHHHHHHHcccCCCccccccccccccCCcCCCCC
Q 045313 87 LSMLDELGCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIKYSLIANYSRYGFEQPIMACCGVGGAPLNYNS 166 (234)
Q Consensus 87 ~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~n~~~ 166 (234)
..|.+.++.++..||++|++++++|+++ +|+++|+|.++.++++||++|||++++++||+.++ .+
T Consensus 177 ------~~~~~~~n~~~~~~N~~L~~~l~~l~~~----~i~~~D~~~~~~~i~~nP~~yGf~~~~~~CC~~~~-~~---- 241 (281)
T cd01847 177 ------AAAAALASALSQTYNQTLQSGLNQLGAN----NIIYVDTATLLKEVVANPAAYGFTNTTTPACTSTS-AA---- 241 (281)
T ss_pred ------chhHHHHHHHHHHHHHHHHHHHHhccCC----eEEEEEHHHHHHHHHhChHhcCccCCCccccCCCC-cc----
Confidence 3688899999999999999999988754 89999999999999999999999999999998653 22
Q ss_pred CcccCCCcccCCcccccccCCCCCCceeccCCChhHHHHHHHHHHHhc
Q 045313 167 GISCGQTKVINGTSVTAKACSDSTEYVNWDGIHYTEAANQYVSTQILT 214 (234)
Q Consensus 167 ~~~C~~~~~~~~~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 214 (234)
.|+.. ...+|.+|++|+|||++||||++|++||+++++
T Consensus 242 --~~~~~--------~~~~c~~~~~y~fwD~~HpTe~~~~~ia~~~~~ 279 (281)
T cd01847 242 --GSGAA--------TLVTAAAQSTYLFADDVHPTPAGHKLIAQYALS 279 (281)
T ss_pred --ccccc--------cccCCCCccceeeccCCCCCHHHHHHHHHHHHH
Confidence 24432 125799999999999999999999999999876
No 4
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional
Probab=100.00 E-value=1.9e-39 Score=290.39 Aligned_cols=165 Identities=15% Similarity=0.179 Sum_probs=143.2
Q ss_pred CceeEEEEechhhhhHhhcCCChhhHHhhHHHHHHHHHHHHHHHHHhCCceEEEecCCCCCCccchhhhccCCcCCCCCC
Q 045313 14 SKGLYTFDIGQNDLAGAFYSKTIDQVLASIPKILEEFETGLRRLYDEGARNFWIHNTGPLGCLAQNVAKFGTDLSMLDEL 93 (234)
Q Consensus 14 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~~i~~~~~~i~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d~~ 93 (234)
+++||+||+|+|||+.. ..++++.+++++.++|++||++|||+|+|+|+||+||+|..+..
T Consensus 235 ~~aL~lV~iG~NDy~~~--------~~~~v~~vV~~~~~~l~~Ly~lGARk~vV~nlpPlGC~P~~~~~----------- 295 (408)
T PRK15381 235 HQDLAIFLLGANDYMTL--------HKDNVIMVVEQQIDDIEKIISGGVNNVLVMGIPDLSLTPYGKHS----------- 295 (408)
T ss_pred CCcEEEEEeccchHHHh--------HHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCcchhhcc-----------
Confidence 68999999999999842 12357789999999999999999999999999999999987632
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHHHHHHHcccCCCccccccccccccCCcCCCCCCcccCCC
Q 045313 94 GCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIKYSLIANYSRYGFEQPIMACCGVGGAPLNYNSGISCGQT 173 (234)
Q Consensus 94 ~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~n~~~~~~C~~~ 173 (234)
...+.+|.++..||++|+++|++|++++|+++|+++|+|+++.++++||++|||++++. ||+.| .++ ....|.+.
T Consensus 296 ~~~~~~N~~a~~fN~~L~~~L~~L~~~~pg~~ivy~D~y~~~~~ii~nP~~yGF~~~~~-cCg~G--~~~--~~~~C~p~ 370 (408)
T PRK15381 296 DEKRKLKDESIAHNALLKTNVEELKEKYPQHKICYYETADAFKVIMEAASNIGYDTENP-YTHHG--YVH--VPGAKDPQ 370 (408)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEhHHHHHHHHhCHHhcCCCcccc-ccCCC--ccC--CccccCcc
Confidence 12478999999999999999999999999999999999999999999999999999886 99866 332 34567662
Q ss_pred cccCCcccccccCCCCCCceeccCCChhHHHHHHHHHHHhc
Q 045313 174 KVINGTSVTAKACSDSTEYVNWDGIHYTEAANQYVSTQILT 214 (234)
Q Consensus 174 ~~~~~~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 214 (234)
..+|. +|+|||.+|||+++|+++|+.+.+
T Consensus 371 ---------~~~C~---~YvFWD~vHPTe~ah~iiA~~~~~ 399 (408)
T PRK15381 371 ---------LDICP---QYVFNDLVHPTQEVHHCFAIMLES 399 (408)
T ss_pred ---------cCCCC---ceEecCCCCChHHHHHHHHHHHHH
Confidence 35784 999999999999999999998765
No 5
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols.
Probab=100.00 E-value=1.2e-38 Score=273.03 Aligned_cols=173 Identities=23% Similarity=0.339 Sum_probs=150.8
Q ss_pred ccCceeEEEEechhhhhHhhcCCChhhHHhhHHHHHHHHHHHHHHHHHhCCceEEEecCCCCCCccchhhhccCCcCCCC
Q 045313 12 YFSKGLYTFDIGQNDLAGAFYSKTIDQVLASIPKILEEFETGLRRLYDEGARNFWIHNTGPLGCLAQNVAKFGTDLSMLD 91 (234)
Q Consensus 12 ~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~~i~~~~~~i~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d 91 (234)
..+++|++||+|+||+...+.. .......++.+++++.++|++|+++|+|+|+|+++||++|+|..+....
T Consensus 97 ~~~~~l~~i~~G~ND~~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~~g~~~i~v~~~p~~~~~P~~~~~~~------- 167 (270)
T cd01846 97 LPPDTLVAIWIGANDLLNALDL--PQNPDTLVTRAVDNLFQALQRLYAAGARNFLVLNLPDLGLTPAFQAQGD------- 167 (270)
T ss_pred CCCCcEEEEEeccchhhhhccc--cccccccHHHHHHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccCCc-------
Confidence 5688999999999999876432 1223457788999999999999999999999999999999999876531
Q ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHHHHHHHcccCCCccccccccccccCCcCCCCCCcccC
Q 045313 92 ELGCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIKYSLIANYSRYGFEQPIMACCGVGGAPLNYNSGISCG 171 (234)
Q Consensus 92 ~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~n~~~~~~C~ 171 (234)
...+.++.+++.||++|++++++|++++|+++|+++|+|.++.+++++|+.|||+++..+||+.+ . |.
T Consensus 168 --~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~p~~yGf~~~~~~C~~~~--------~--~~ 235 (270)
T cd01846 168 --AVAARATALTAAYNAKLAEKLAELKAQHPGVNILLFDTNALFNDILDNPAAYGFTNVTDPCLDYV--------Y--SY 235 (270)
T ss_pred --ccHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEhHHHHHHHHhCHHhcCCCcCcchhcCCC--------c--cc
Confidence 11268999999999999999999999999999999999999999999999999999999999843 1 54
Q ss_pred CCcccCCcccccccCCCCCCceeccCCChhHHHHHHHHHHHhc
Q 045313 172 QTKVINGTSVTAKACSDSTEYVNWDGIHYTEAANQYVSTQILT 214 (234)
Q Consensus 172 ~~~~~~~~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 214 (234)
+ ....|.+|++|+|||++|||+++|++||+++++
T Consensus 236 ~---------~~~~c~~~~~y~fwD~~HpT~~~~~~iA~~~~~ 269 (270)
T cd01846 236 S---------PREACANPDKYLFWDEVHPTTAVHQLIAEEVAA 269 (270)
T ss_pred c---------ccCCCCCccceEEecCCCccHHHHHHHHHHHHh
Confidence 3 236899999999999999999999999999876
No 6
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=99.96 E-value=9.5e-29 Score=214.56 Aligned_cols=174 Identities=21% Similarity=0.261 Sum_probs=138.0
Q ss_pred ccCceeEEEEechhhhhHhhcCCChhhHHhhHHHHHHHHHHHHHHHHHhCCceEEEecCCCCCCccchhhhccCCcCCCC
Q 045313 12 YFSKGLYTFDIGQNDLAGAFYSKTIDQVLASIPKILEEFETGLRRLYDEGARNFWIHNTGPLGCLAQNVAKFGTDLSMLD 91 (234)
Q Consensus 12 ~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~~i~~~~~~i~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d 91 (234)
+-.+.|+.+|.|+||++..-.. .......+......++...|++|.+.|||+++|+++|+++.+|......
T Consensus 159 l~p~~l~~~~ggand~~~~~~~-~a~~~q~~~~~~~~~~~~~Vq~L~~AGA~~i~v~~lpDl~l~P~~~~~~-------- 229 (370)
T COG3240 159 LDPSALYFLWGGANDYLALPML-KAAAYQQLEGSTKADQSSAVQRLIAAGARNILVMTLPDLSLTPAGKAYG-------- 229 (370)
T ss_pred cCHHHHHHHhhcchhhhccccc-chhhhHHHhcchhhHHHHHHHHHHHhhccEEEEeecccccccccccccc--------
Confidence 5567889999999999875211 1111222333446679999999999999999999999999999876531
Q ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHHHHHHHcccCCCccccccccccccCCcCCCCCCcccC
Q 045313 92 ELGCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIKYSLIANYSRYGFEQPIMACCGVGGAPLNYNSGISCG 171 (234)
Q Consensus 92 ~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~n~~~~~~C~ 171 (234)
.-...+..++..||..|...|++++ .+|+.+|++.+++++++||++|||+|++..||... .- ...|+
T Consensus 230 --~~~~~a~~~t~~~Na~L~~~L~~~g-----~nIi~iD~~~llk~im~nPa~fGlant~~~~c~~~--~~----~~~~~ 296 (370)
T COG3240 230 --TEAIQASQATIAFNASLTSQLEQLG-----GNIIRIDTYTLLKEIMTNPAEFGLANTTAPACDAT--VS----NPACS 296 (370)
T ss_pred --chHHHHHHHHHHHHHHHHHHHHHhc-----CcEEEeEhHHHHHHHHhCHHhcCcccCCCcccCcc--cC----Ccccc
Confidence 1223788999999999999998774 79999999999999999999999999999999743 21 22566
Q ss_pred CCcccCCcccccccCCCCCCceeccCCChhHHHHHHHHHHHhcC
Q 045313 172 QTKVINGTSVTAKACSDSTEYVNWDGIHYTEAANQYVSTQILTG 215 (234)
Q Consensus 172 ~~~~~~~~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 215 (234)
... ...|..|++|+|||++|||+++|++||++++.-
T Consensus 297 a~~--------p~~~~~~~~ylFaD~vHPTt~~H~liAeyila~ 332 (370)
T COG3240 297 ASL--------PALCAAPQKYLFADSVHPTTAVHHLIAEYILAR 332 (370)
T ss_pred ccc--------ccccCCccceeeecccCCchHHHHHHHHHHHHH
Confidence 532 134566778999999999999999999999874
No 7
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified []. Members of this entry include; Aeromonas hydrophila lipase, Vibrio mimicus arylesterase, Vibrio parahaemolyticus thermolabile haemolysin, rabbit phospholipase (AdRab-B), and Brassica napus anter-specific proline-rich protein.; GO: 0016788 hydrolase activity, acting on ester bonds, 0006629 lipid metabolic process; PDB: 2WAO_A 2WAB_A 1V2G_A 1U8U_A 1JRL_A 1IVN_A 1J00_A 1DEO_A 1K7C_A 1PP4_A ....
Probab=99.85 E-value=5.3e-21 Score=158.31 Aligned_cols=148 Identities=29% Similarity=0.536 Sum_probs=118.5
Q ss_pred cccCceeEEEEechhhhhHhhcCCChhhHHhhHHHHHHHHHHHHHHHHHhCCc-----eEEEecCCCCCCccchhhhccC
Q 045313 11 DYFSKGLYTFDIGQNDLAGAFYSKTIDQVLASIPKILEEFETGLRRLYDEGAR-----NFWIHNTGPLGCLAQNVAKFGT 85 (234)
Q Consensus 11 ~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~~i~~~~~~i~~L~~~Gar-----~~vv~~lpplg~~P~~~~~~~~ 85 (234)
...+.+|++||+|+||++... ........++.+++++.+.|++|++.|+| +++++++||++|.|.......
T Consensus 79 ~~~~~~lv~i~~G~ND~~~~~---~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 154 (234)
T PF00657_consen 79 SFYDPDLVVIWIGTNDYFNNR---DSSDNNTSVEEFVENLRNAIKRLRSNGARLIIVANIVVINLPPIGCLPAWSSNNK- 154 (234)
T ss_dssp HHHTTSEEEEE-SHHHHSSCC---SCSTTHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEEHHC-GGGSTTHHHTHT-
T ss_pred ccCCcceEEEecccCcchhhc---ccchhhhhHhhHhhhhhhhhhHHhccCCccccccccccccccccccccccccccc-
Confidence 456789999999999987411 11122345678899999999999999999 999999999998887765431
Q ss_pred CcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHhhcC-CceEEEEechhHHHHH--HHcccCCCccccccccccccCCcC
Q 045313 86 DLSMLDELGCVSGHNQAAKLFNLQLHALCKKLQGDYT-DSNITYVDIYTIKYSL--IANYSRYGFEQPIMACCGVGGAPL 162 (234)
Q Consensus 86 ~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~-~~~i~~~D~~~~~~~i--~~nP~~yGf~~~~~~Cc~~g~~~~ 162 (234)
....|.+.+++.+..||.+|++.+.+|+..++ +.++.++|++..+.++ ..+|..
T Consensus 155 -----~~~~~~~~~~~~~~~~n~~l~~~~~~l~~~~~~~~~v~~~D~~~~~~~~~~~~~~~~------------------ 211 (234)
T PF00657_consen 155 -----DSASCIERLNAIVAAFNSALREVAAQLRKDYPKGANVPYFDIYSIFSDMYGIQNPEN------------------ 211 (234)
T ss_dssp -----TTCTTHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCTEEEEEHHHHHHHHHHHHHGGH------------------
T ss_pred -----cccccchhhHHHHHHHHHHHHHHhhhcccccccCCceEEEEHHHHHHHhhhccCccc------------------
Confidence 23579999999999999999999999987776 8999999999999988 443322
Q ss_pred CCCCCcccCCCcccCCcccccccCCCCCCceeccCCChhHHHHHHHHHHH
Q 045313 163 NYNSGISCGQTKVINGTSVTAKACSDSTEYVNWDGIHYTEAANQYVSTQI 212 (234)
Q Consensus 163 n~~~~~~C~~~~~~~~~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~ 212 (234)
++|+|||++|||+++|++||+++
T Consensus 212 ---------------------------~~~~~~D~~Hpt~~g~~~iA~~i 234 (234)
T PF00657_consen 212 ---------------------------DKYMFWDGVHPTEKGHKIIAEYI 234 (234)
T ss_dssp ---------------------------HHCBBSSSSSB-HHHHHHHHHHH
T ss_pred ---------------------------ceeccCCCcCCCHHHHHHHHcCC
Confidence 46799999999999999999975
No 8
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.05 E-value=4.3e-09 Score=84.61 Aligned_cols=127 Identities=17% Similarity=0.195 Sum_probs=83.8
Q ss_pred eeEEEEechhhhhHhhc-CCChhhHHhhHHHHHHHHHHHHHHHH-HhCCceEEEecCCCCCCccchhhhccCCcCCCCCC
Q 045313 16 GLYTFDIGQNDLAGAFY-SKTIDQVLASIPKILEEFETGLRRLY-DEGARNFWIHNTGPLGCLAQNVAKFGTDLSMLDEL 93 (234)
Q Consensus 16 sL~~i~iG~ND~~~~~~-~~~~~~~~~~v~~~i~~~~~~i~~L~-~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d~~ 93 (234)
.+++|++|+||+..... ..+ .+...+++.+.|+.+. .....+|++++.+|....+.. .
T Consensus 63 d~v~l~~G~ND~~~~~~~~~~-------~~~~~~~l~~~v~~~~~~~~~~~ii~~~p~~~~~~~~~-------------~ 122 (191)
T cd01834 63 DVVSIMFGINDSFRGFDDPVG-------LEKFKTNLRRLIDRLKNKESAPRIVLVSPIAYEANEDP-------------L 122 (191)
T ss_pred CEEEEEeecchHhhccccccc-------HHHHHHHHHHHHHHHHcccCCCcEEEECCcccCCCCCC-------------C
Confidence 69999999999875321 111 2345677777788775 334456777765554322110 0
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHHHHHHHcccCCCccccccccccccCCcCCCCCCcccCCC
Q 045313 94 GCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIKYSLIANYSRYGFEQPIMACCGVGGAPLNYNSGISCGQT 173 (234)
Q Consensus 94 ~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~n~~~~~~C~~~ 173 (234)
.-....+.....||+.|++..++ .++.++|++..+.+....+
T Consensus 123 ~~~~~~~~~~~~~n~~l~~~a~~-------~~~~~iD~~~~~~~~~~~~------------------------------- 164 (191)
T cd01834 123 PDGAEYNANLAAYADAVRELAAE-------NGVAFVDLFTPMKEAFQKA------------------------------- 164 (191)
T ss_pred CChHHHHHHHHHHHHHHHHHHHH-------cCCeEEecHHHHHHHHHhC-------------------------------
Confidence 01235567778888888776542 2588999999988653321
Q ss_pred cccCCcccccccCCCCCCceeccCCChhHHHHHHHHHHHhcC
Q 045313 174 KVINGTSVTAKACSDSTEYVNWDGIHYTEAANQYVSTQILTG 215 (234)
Q Consensus 174 ~~~~~~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 215 (234)
+..++++|++||+++||++||+.+.++
T Consensus 165 ---------------~~~~~~~D~~Hpn~~G~~~~a~~~~~~ 191 (191)
T cd01834 165 ---------------GEAVLTVDGVHPNEAGHRALARLWLEA 191 (191)
T ss_pred ---------------CCccccCCCCCCCHHHHHHHHHHHHhC
Confidence 123467999999999999999998763
No 9
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.92 E-value=1e-08 Score=80.35 Aligned_cols=116 Identities=13% Similarity=0.168 Sum_probs=80.6
Q ss_pred CceeEEEEechhhhhHhhcCCChhhHHhhHHHHHHHHHHHHHHHHHhCCc-eEEEecCCCCCCccchhhhccCCcCCCCC
Q 045313 14 SKGLYTFDIGQNDLAGAFYSKTIDQVLASIPKILEEFETGLRRLYDEGAR-NFWIHNTGPLGCLAQNVAKFGTDLSMLDE 92 (234)
Q Consensus 14 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~~i~~~~~~i~~L~~~Gar-~~vv~~lpplg~~P~~~~~~~~~~~~~d~ 92 (234)
.-++++|.+|+||+... .+. ....+++.+.|+++.+.+.+ ++++.++||..-.+
T Consensus 40 ~pd~vvi~~G~ND~~~~---~~~-------~~~~~~~~~~i~~i~~~~p~~~ii~~~~~p~~~~~--------------- 94 (157)
T cd01833 40 KPDVVLLHLGTNDLVLN---RDP-------DTAPDRLRALIDQMRAANPDVKIIVATLIPTTDAS--------------- 94 (157)
T ss_pred CCCEEEEeccCcccccC---CCH-------HHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCCcc---------------
Confidence 44789999999998643 122 34567777778877776432 35556655532111
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHHHHHHHcccCCCccccccccccccCCcCCCCCCcccCC
Q 045313 93 LGCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIKYSLIANYSRYGFEQPIMACCGVGGAPLNYNSGISCGQ 172 (234)
Q Consensus 93 ~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~n~~~~~~C~~ 172 (234)
.+.....||..+++.+++.+.. +..+.++|++..+..
T Consensus 95 ------~~~~~~~~n~~l~~~~~~~~~~--~~~v~~vd~~~~~~~----------------------------------- 131 (157)
T cd01833 95 ------GNARIAEYNAAIPGVVADLRTA--GSPVVLVDMSTGYTT----------------------------------- 131 (157)
T ss_pred ------hhHHHHHHHHHHHHHHHHHhcC--CCCEEEEecCCCCCC-----------------------------------
Confidence 1456789999999999876543 567889998644321
Q ss_pred CcccCCcccccccCCCCCCceeccCCChhHHHHHHHHHHHhcC
Q 045313 173 TKVINGTSVTAKACSDSTEYVNWDGIHYTEAANQYVSTQILTG 215 (234)
Q Consensus 173 ~~~~~~~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 215 (234)
+++.+|++|||++||+.||+.+++.
T Consensus 132 ------------------~~~~~Dg~Hpn~~Gy~~~a~~~~~~ 156 (157)
T cd01833 132 ------------------ADDLYDGLHPNDQGYKKMADAWYEA 156 (157)
T ss_pred ------------------cccccCCCCCchHHHHHHHHHHHhh
Confidence 2355899999999999999998864
No 10
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=98.90 E-value=1.4e-08 Score=81.05 Aligned_cols=120 Identities=13% Similarity=0.203 Sum_probs=80.3
Q ss_pred ceeEEEEechhhhhHhhcCCChhhHHhhHHHHHHHHHHHHHHHHHh-CCceEEEecCCCCCCccchhhhccCCcCCCCCC
Q 045313 15 KGLYTFDIGQNDLAGAFYSKTIDQVLASIPKILEEFETGLRRLYDE-GARNFWIHNTGPLGCLAQNVAKFGTDLSMLDEL 93 (234)
Q Consensus 15 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~~i~~~~~~i~~L~~~-Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d~~ 93 (234)
-.+++|++|+||.... .+. +...+++.+.++++.+. ...+++++++||..-.+.
T Consensus 52 pd~v~i~~G~ND~~~~---~~~-------~~~~~~~~~l~~~~~~~~p~~~vi~~~~~p~~~~~~--------------- 106 (174)
T cd01841 52 PSKVFLFLGTNDIGKE---VSS-------NQFIKWYRDIIEQIREEFPNTKIYLLSVLPVLEEDE--------------- 106 (174)
T ss_pred CCEEEEEeccccCCCC---CCH-------HHHHHHHHHHHHHHHHHCCCCEEEEEeeCCcCcccc---------------
Confidence 3688999999997532 122 34577777788877765 356788898887643221
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHHHHHHHcccCCCccccccccccccCCcCCCCCCcccCCC
Q 045313 94 GCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIKYSLIANYSRYGFEQPIMACCGVGGAPLNYNSGISCGQT 173 (234)
Q Consensus 94 ~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~n~~~~~~C~~~ 173 (234)
+....++....||+.+++..++ .++.++|+++.+.+-. + .
T Consensus 107 -~~~~~~~~~~~~n~~l~~~a~~-------~~~~~id~~~~~~~~~------------------~--~------------ 146 (174)
T cd01841 107 -IKTRSNTRIQRLNDAIKELAPE-------LGVTFIDLNDVLVDEF------------------G--N------------ 146 (174)
T ss_pred -cccCCHHHHHHHHHHHHHHHHH-------CCCEEEEcHHHHcCCC------------------C--C------------
Confidence 0112345678899998876553 2478999998764210 1 0
Q ss_pred cccCCcccccccCCCCCCceeccCCChhHHHHHHHHHHHhc
Q 045313 174 KVINGTSVTAKACSDSTEYVNWDGIHYTEAANQYVSTQILT 214 (234)
Q Consensus 174 ~~~~~~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 214 (234)
....+..|++||+++||++||+.+.+
T Consensus 147 ---------------~~~~~~~DglH~n~~Gy~~~a~~l~~ 172 (174)
T cd01841 147 ---------------LKKEYTTDGLHFNPKGYQKLLEILEE 172 (174)
T ss_pred ---------------ccccccCCCcccCHHHHHHHHHHHHh
Confidence 01135689999999999999998864
No 11
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.88 E-value=2.2e-08 Score=78.07 Aligned_cols=123 Identities=17% Similarity=0.183 Sum_probs=80.2
Q ss_pred ccCceeEEEEechhhhhHhhcCCChhhHHhhHHHHHHHHHHHHHHHHH-hCCceEEEecCCCCCCccchhhhccCCcCCC
Q 045313 12 YFSKGLYTFDIGQNDLAGAFYSKTIDQVLASIPKILEEFETGLRRLYD-EGARNFWIHNTGPLGCLAQNVAKFGTDLSML 90 (234)
Q Consensus 12 ~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~~i~~~~~~i~~L~~-~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~ 90 (234)
..+-.++++.+|+||+.... ..+. ....+.+...++.+.+ ....+|++++.|+....+.
T Consensus 63 ~~~~d~vil~~G~ND~~~~~-~~~~-------~~~~~~~~~~i~~~~~~~~~~~vv~~~~~~~~~~~~------------ 122 (187)
T cd00229 63 KDKPDLVIIELGTNDLGRGG-DTSI-------DEFKANLEELLDALRERAPGAKVILITPPPPPPREG------------ 122 (187)
T ss_pred cCCCCEEEEEeccccccccc-ccCH-------HHHHHHHHHHHHHHHHHCCCCcEEEEeCCCCCCCch------------
Confidence 45668999999999986431 0121 2334455555555554 4556788888888776553
Q ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHHHHHHHcccCCCccccccccccccCCcCCCCCCccc
Q 045313 91 DELGCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIKYSLIANYSRYGFEQPIMACCGVGGAPLNYNSGISC 170 (234)
Q Consensus 91 d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~n~~~~~~C 170 (234)
..+.....+|..+++..++.... ..+.++|++..+...
T Consensus 123 -------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~-------------------------------- 160 (187)
T cd00229 123 -------LLGRALPRYNEAIKAVAAENPAP---SGVDLVDLAALLGDE-------------------------------- 160 (187)
T ss_pred -------hhHHHHHHHHHHHHHHHHHcCCC---cceEEEEhhhhhCCC--------------------------------
Confidence 11234567788877766554321 347777776544321
Q ss_pred CCCcccCCcccccccCCCCCCceeccCCChhHHHHHHHHHHHhc
Q 045313 171 GQTKVINGTSVTAKACSDSTEYVNWDGIHYTEAANQYVSTQILT 214 (234)
Q Consensus 171 ~~~~~~~~~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 214 (234)
+..+++||++|||++||+++|+.+++
T Consensus 161 ------------------~~~~~~~Dg~H~~~~G~~~~a~~i~~ 186 (187)
T cd00229 161 ------------------DKSLYSPDGIHPNPAGHKLIAEALAS 186 (187)
T ss_pred ------------------ccccccCCCCCCchhhHHHHHHHHhc
Confidence 23457799999999999999999875
No 12
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.86 E-value=1.7e-08 Score=83.00 Aligned_cols=119 Identities=17% Similarity=0.240 Sum_probs=75.1
Q ss_pred CceeEEEEechhhhhHhhcCCChhhHHhhHHHHHHHHHHHHHHHHHh------CCceEEEecCCCCCCccchhhhccCCc
Q 045313 14 SKGLYTFDIGQNDLAGAFYSKTIDQVLASIPKILEEFETGLRRLYDE------GARNFWIHNTGPLGCLAQNVAKFGTDL 87 (234)
Q Consensus 14 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~~i~~~~~~i~~L~~~------Gar~~vv~~lpplg~~P~~~~~~~~~~ 87 (234)
.-++++|++|+||+...+ ..+. +...+++.+.|+.+.+. +..+++++..||+...+...
T Consensus 79 ~pd~vii~lGtND~~~~~-~~~~-------~~~~~~l~~lv~~i~~~~~~~~~~~~~iil~~pp~~~~~~~~~------- 143 (208)
T cd01839 79 PLDLVIIMLGTNDLKSYF-NLSA-------AEIAQGLGALVDIIRTAPIEPGMPAPKILIVAPPPIRTPKGSL------- 143 (208)
T ss_pred CCCEEEEecccccccccc-CCCH-------HHHHHHHHHHHHHHHhccccccCCCCCEEEEeCCccCccccch-------
Confidence 447999999999976422 1222 23455555556655554 46678888888762211110
Q ss_pred CCCCCCCccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHHHHHHHcccCCCccccccccccccCCcCCCCCC
Q 045313 88 SMLDELGCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIKYSLIANYSRYGFEQPIMACCGVGGAPLNYNSG 167 (234)
Q Consensus 88 ~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~n~~~~ 167 (234)
..+....++....||+.+++..++. ++.++|++.++. .
T Consensus 144 -----~~~~~~~~~~~~~~~~~~~~~a~~~-------~~~~iD~~~~~~------------------------~------ 181 (208)
T cd01839 144 -----AGKFAGAEEKSKGLADAYRALAEEL-------GCHFFDAGSVGS------------------------T------ 181 (208)
T ss_pred -----hhhhccHHHHHHHHHHHHHHHHHHh-------CCCEEcHHHHhc------------------------c------
Confidence 1122334667788888887766532 466778654220 0
Q ss_pred cccCCCcccCCcccccccCCCCCCceeccCCChhHHHHHHHHHHHhc
Q 045313 168 ISCGQTKVINGTSVTAKACSDSTEYVNWDGIHYTEAANQYVSTQILT 214 (234)
Q Consensus 168 ~~C~~~~~~~~~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 214 (234)
+..|++|||++||++||+.+++
T Consensus 182 -------------------------~~~DGvH~~~~G~~~~a~~l~~ 203 (208)
T cd01839 182 -------------------------SPVDGVHLDADQHAALGQALAS 203 (208)
T ss_pred -------------------------CCCCccCcCHHHHHHHHHHHHH
Confidence 2369999999999999999875
No 13
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.85 E-value=3.3e-08 Score=80.01 Aligned_cols=120 Identities=16% Similarity=0.153 Sum_probs=78.8
Q ss_pred CceeEEEEechhhhhHhhcCCChhhHHhhHHHHHHHHHHHHHHHHH-hCCceEEEecCCCCCCccchhhhccCCcCCCCC
Q 045313 14 SKGLYTFDIGQNDLAGAFYSKTIDQVLASIPKILEEFETGLRRLYD-EGARNFWIHNTGPLGCLAQNVAKFGTDLSMLDE 92 (234)
Q Consensus 14 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~~i~~~~~~i~~L~~-~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d~ 92 (234)
.-++++|.+|+||+... .+ .++..+++.+.|+++.+ ....+|++.++||++..|....
T Consensus 67 ~pd~Vii~~G~ND~~~~---~~-------~~~~~~~l~~li~~i~~~~~~~~iiv~~~p~~~~~~~~~~----------- 125 (191)
T cd01836 67 RFDVAVISIGVNDVTHL---TS-------IARWRKQLAELVDALRAKFPGARVVVTAVPPLGRFPALPQ----------- 125 (191)
T ss_pred CCCEEEEEecccCcCCC---CC-------HHHHHHHHHHHHHHHHhhCCCCEEEEECCCCcccCCCCcH-----------
Confidence 44789999999997632 12 23456677777777776 3456789999999876553211
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHHHHHHHcccCCCccccccccccccCCcCCCCCCcccCC
Q 045313 93 LGCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIKYSLIANYSRYGFEQPIMACCGVGGAPLNYNSGISCGQ 172 (234)
Q Consensus 93 ~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~n~~~~~~C~~ 172 (234)
.....+++....+|+.+++..+ ++ ..+.++|++..+.
T Consensus 126 -~~~~~~~~~~~~~n~~~~~~a~----~~--~~~~~id~~~~~~------------------------------------ 162 (191)
T cd01836 126 -PLRWLLGRRARLLNRALERLAS----EA--PRVTLLPATGPLF------------------------------------ 162 (191)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHh----cC--CCeEEEecCCccc------------------------------------
Confidence 1112345566777777766554 32 2566778764431
Q ss_pred CcccCCcccccccCCCCCCceeccCCChhHHHHHHHHHHHhc
Q 045313 173 TKVINGTSVTAKACSDSTEYVNWDGIHYTEAANQYVSTQILT 214 (234)
Q Consensus 173 ~~~~~~~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 214 (234)
..++..|++||+++||+++|+.+.+
T Consensus 163 -----------------~~~~~~DglHpn~~Gy~~~a~~l~~ 187 (191)
T cd01836 163 -----------------PALFASDGFHPSAAGYAVWAEALAP 187 (191)
T ss_pred -----------------hhhccCCCCCCChHHHHHHHHHHHH
Confidence 0123369999999999999999875
No 14
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=98.84 E-value=1.2e-07 Score=77.54 Aligned_cols=131 Identities=12% Similarity=0.150 Sum_probs=82.8
Q ss_pred CceeEEEEechhhhhHhhcCC----ChhhHHhhHHHHHHHHHHHHHHHHHhCCc-eEEEecCCCCCCccchhhhccCCcC
Q 045313 14 SKGLYTFDIGQNDLAGAFYSK----TIDQVLASIPKILEEFETGLRRLYDEGAR-NFWIHNTGPLGCLAQNVAKFGTDLS 88 (234)
Q Consensus 14 ~~sL~~i~iG~ND~~~~~~~~----~~~~~~~~v~~~i~~~~~~i~~L~~~Gar-~~vv~~lpplg~~P~~~~~~~~~~~ 88 (234)
.-.+++|.+|+||+....... +..+...-.....+++.+.|+++.+.+.+ +|+++++++ |.....
T Consensus 68 ~~d~V~i~~G~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ir~~~p~~~Ivv~~~~~----p~~~~~------ 137 (204)
T cd04506 68 KADVITITIGGNDLMQVLEKNFLSLDVEDFKKAEETYQNNLKKIFKEIRKLNPDAPIFLVGLYN----PFYVYF------ 137 (204)
T ss_pred cCCEEEEEecchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecCC----cccccc------
Confidence 457899999999987654210 11222223456677888888888886543 567776531 111100
Q ss_pred CCCCCCccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHHHHHHHcccCCCccccccccccccCCcCCCCCCc
Q 045313 89 MLDELGCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIKYSLIANYSRYGFEQPIMACCGVGGAPLNYNSGI 168 (234)
Q Consensus 89 ~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~n~~~~~ 168 (234)
.-....++.+..||..+++.+++ ..++.++|+++.+...-
T Consensus 138 -----~~~~~~~~~~~~~n~~~~~~a~~------~~~v~~vd~~~~~~~~~----------------------------- 177 (204)
T cd04506 138 -----PNITEINDIVNDWNEASQKLASQ------YKNAYFVPIFDLFSDGQ----------------------------- 177 (204)
T ss_pred -----chHHHHHHHHHHHHHHHHHHHHh------CCCeEEEehHHhhcCCc-----------------------------
Confidence 00124567888899887776542 12488999987664210
Q ss_pred ccCCCcccCCcccccccCCCCCCceeccCCChhHHHHHHHHHHHhc
Q 045313 169 SCGQTKVINGTSVTAKACSDSTEYVNWDGIHYTEAANQYVSTQILT 214 (234)
Q Consensus 169 ~C~~~~~~~~~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 214 (234)
+..++..|++||+++||++||+.+.+
T Consensus 178 --------------------~~~~~~~Dg~Hpn~~G~~~~a~~l~~ 203 (204)
T cd04506 178 --------------------NKYLLTSDHFHPNDKGYQLIADRVFK 203 (204)
T ss_pred --------------------ccccccccCcCCCHHHHHHHHHHHHh
Confidence 11235579999999999999999875
No 15
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.84 E-value=4.3e-08 Score=77.86 Aligned_cols=117 Identities=22% Similarity=0.319 Sum_probs=77.4
Q ss_pred CceeEEEEechhhhhHhhcCCChhhHHhhHHHHHHHHHHHHHHHHH--hCCceEEEecCCCCCCccchhhhccCCcCCCC
Q 045313 14 SKGLYTFDIGQNDLAGAFYSKTIDQVLASIPKILEEFETGLRRLYD--EGARNFWIHNTGPLGCLAQNVAKFGTDLSMLD 91 (234)
Q Consensus 14 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~~i~~~~~~i~~L~~--~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d 91 (234)
.-.++++.+|+||.... .+. +...+++.+.|+.+.+ .++ +|++.++||.+ +. .
T Consensus 48 ~pd~vvl~~G~ND~~~~---~~~-------~~~~~~l~~li~~~~~~~~~~-~vi~~~~~p~~--~~---~--------- 102 (169)
T cd01828 48 QPKAIFIMIGINDLAQG---TSD-------EDIVANYRTILEKLRKHFPNI-KIVVQSILPVG--EL---K--------- 102 (169)
T ss_pred CCCEEEEEeeccCCCCC---CCH-------HHHHHHHHHHHHHHHHHCCCC-eEEEEecCCcC--cc---C---------
Confidence 34799999999997532 122 3456667777777776 555 58888888765 10 0
Q ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHHHHHHHcccCCCccccccccccccCCcCCCCCCcccC
Q 045313 92 ELGCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIKYSLIANYSRYGFEQPIMACCGVGGAPLNYNSGISCG 171 (234)
Q Consensus 92 ~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~n~~~~~~C~ 171 (234)
...+.....+|+.+++..++ .++.++|+++.+.+- .+
T Consensus 103 -----~~~~~~~~~~n~~l~~~a~~-------~~~~~id~~~~~~~~-------------------~~------------ 139 (169)
T cd01828 103 -----SIPNEQIEELNRQLAQLAQQ-------EGVTFLDLWAVFTNA-------------------DG------------ 139 (169)
T ss_pred -----cCCHHHHHHHHHHHHHHHHH-------CCCEEEechhhhcCC-------------------CC------------
Confidence 01234568899888876552 256788988654210 00
Q ss_pred CCcccCCcccccccCCCCCCceeccCCChhHHHHHHHHHHHhc
Q 045313 172 QTKVINGTSVTAKACSDSTEYVNWDGIHYTEAANQYVSTQILT 214 (234)
Q Consensus 172 ~~~~~~~~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 214 (234)
+..+++.+|++|||++||+++|+.+.+
T Consensus 140 ----------------~~~~~~~~DgiHpn~~G~~~~a~~i~~ 166 (169)
T cd01828 140 ----------------DLKNEFTTDGLHLNAKGYAVWAAALQP 166 (169)
T ss_pred ----------------CcchhhccCccccCHHHHHHHHHHHHH
Confidence 012346689999999999999999876
No 16
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.83 E-value=2.1e-08 Score=82.39 Aligned_cols=56 Identities=13% Similarity=0.136 Sum_probs=37.5
Q ss_pred eeEEEEechhhhhHhhcCCChhhHHhhHHHHHHHHHHHHHHHHHhCCceEEEecCCCCC
Q 045313 16 GLYTFDIGQNDLAGAFYSKTIDQVLASIPKILEEFETGLRRLYDEGARNFWIHNTGPLG 74 (234)
Q Consensus 16 sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~~i~~~~~~i~~L~~~Gar~~vv~~lpplg 74 (234)
.+++|++|+||+........ .....++...+++...|+++.+.|++ +++.++||..
T Consensus 76 ~~vii~~G~ND~~~~~~~~~--~~~~~~~~~~~~l~~ii~~~~~~~~~-vil~t~~P~~ 131 (204)
T cd01830 76 RTVIILEGVNDIGASGTDFA--AAPVTAEELIAGYRQLIRRAHARGIK-VIGATITPFE 131 (204)
T ss_pred CEEEEecccccccccccccc--cCCCCHHHHHHHHHHHHHHHHHCCCe-EEEecCCCCC
Confidence 57899999999864321110 01112346677888888888888874 7778887753
No 17
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.81 E-value=2.6e-08 Score=81.13 Aligned_cols=135 Identities=11% Similarity=0.028 Sum_probs=80.5
Q ss_pred ceeEEEEechhhhhHhhcCCC--hhhHHhhHHHHHHHHHHHHHHHHHhCCceEEEecCCCCCCccchhhhccCCcCCCCC
Q 045313 15 KGLYTFDIGQNDLAGAFYSKT--IDQVLASIPKILEEFETGLRRLYDEGARNFWIHNTGPLGCLAQNVAKFGTDLSMLDE 92 (234)
Q Consensus 15 ~sL~~i~iG~ND~~~~~~~~~--~~~~~~~v~~~i~~~~~~i~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d~ 92 (234)
=++++|.+|+||+........ ......+.+...+++...++++.+.|++ +++++.||+.-.
T Consensus 60 pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~~~~~l~~lv~~~~~~~~~-vili~~pp~~~~---------------- 122 (200)
T cd01829 60 PDVVVVFLGANDRQDIRDGDGYLKFGSPEWEEEYRQRIDELLNVARAKGVP-VIWVGLPAMRSP---------------- 122 (200)
T ss_pred CCEEEEEecCCCCccccCCCceeecCChhHHHHHHHHHHHHHHHHHhCCCc-EEEEcCCCCCCh----------------
Confidence 368899999999864321100 0001223445566777777777777776 777787775310
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHHHHHHHcccCCCccccccccccccCCcCCCCCCcccCC
Q 045313 93 LGCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIKYSLIANYSRYGFEQPIMACCGVGGAPLNYNSGISCGQ 172 (234)
Q Consensus 93 ~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~n~~~~~~C~~ 172 (234)
..++....+|..+++..+ + ..+.++|++..+.+. ..|+...+ .
T Consensus 123 -----~~~~~~~~~~~~~~~~a~----~---~~~~~id~~~~~~~~-------------~~~~~~~~--~---------- 165 (200)
T cd01829 123 -----KLSADMVYLNSLYREEVA----K---AGGEFVDVWDGFVDE-------------NGRFTYSG--T---------- 165 (200)
T ss_pred -----hHhHHHHHHHHHHHHHHH----H---cCCEEEEhhHhhcCC-------------CCCeeeec--c----------
Confidence 122445667777766554 2 247899998776321 12221100 0
Q ss_pred CcccCCcccccccCCCCCCceeccCCChhHHHHHHHHHHHhc
Q 045313 173 TKVINGTSVTAKACSDSTEYVNWDGIHYTEAANQYVSTQILT 214 (234)
Q Consensus 173 ~~~~~~~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 214 (234)
.....+..++..|++|||+++|++||+.+.+
T Consensus 166 -----------~~~~~~~~~~~~DgvH~~~~G~~~~a~~i~~ 196 (200)
T cd01829 166 -----------DVNGKKVRLRTNDGIHFTAAGGRKLAFYVEK 196 (200)
T ss_pred -----------CCCCcEEEeecCCCceECHHHHHHHHHHHHH
Confidence 0111233456679999999999999999876
No 18
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=98.81 E-value=3.5e-08 Score=79.80 Aligned_cols=133 Identities=16% Similarity=0.160 Sum_probs=79.9
Q ss_pred CceeEEEEechhhhhHhhcCCChhhHHhhHHHHHHHHHHHHHHHHH--hCCceEEEecCCCCCCccchhhhccCCcCCCC
Q 045313 14 SKGLYTFDIGQNDLAGAFYSKTIDQVLASIPKILEEFETGLRRLYD--EGARNFWIHNTGPLGCLAQNVAKFGTDLSMLD 91 (234)
Q Consensus 14 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~~i~~~~~~i~~L~~--~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d 91 (234)
.-.+++|++|+||.......... ..+...+++...|+++.+ .|+ ++++++.||.+-.........
T Consensus 63 ~pd~vii~~G~ND~~~~~~~~~~-----~~~~~~~~~~~~i~~~~~~~~~~-~ii~~t~~~~~~~~~~~~~~~------- 129 (199)
T cd01838 63 QPDLVTIFFGANDAALPGQPQHV-----PLDEYKENLRKIVSHLKSLSPKT-KVILITPPPVDEEAWEKSLED------- 129 (199)
T ss_pred CceEEEEEecCccccCCCCCCcc-----cHHHHHHHHHHHHHHHHhhCCCC-eEEEeCCCCCCHHHHhhhhcc-------
Confidence 56799999999998643210000 123445566666666665 465 477778777543211100000
Q ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHHHHHHHcccCCCccccccccccccCCcCCCCCCcccC
Q 045313 92 ELGCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIKYSLIANYSRYGFEQPIMACCGVGGAPLNYNSGISCG 171 (234)
Q Consensus 92 ~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~n~~~~~~C~ 171 (234)
........++....||+.+++..++. .+.++|+++.+...- +
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~a~~~-------~~~~iD~~~~~~~~~------------------~------------- 171 (199)
T cd01838 130 GGSQPGRTNELLKQYAEACVEVAEEL-------GVPVIDLWTAMQEEA------------------G------------- 171 (199)
T ss_pred ccCCccccHHHHHHHHHHHHHHHHHh-------CCcEEEHHHHHHhcc------------------C-------------
Confidence 00122344667788888877655432 477899987765310 0
Q ss_pred CCcccCCcccccccCCCCCCceeccCCChhHHHHHHHHHHHhc
Q 045313 172 QTKVINGTSVTAKACSDSTEYVNWDGIHYTEAANQYVSTQILT 214 (234)
Q Consensus 172 ~~~~~~~~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 214 (234)
....++.|++||+++||++||+.+.+
T Consensus 172 -----------------~~~~~~~Dg~Hpn~~G~~~~a~~l~~ 197 (199)
T cd01838 172 -----------------WLESLLTDGLHFSSKGYELLFEEIVK 197 (199)
T ss_pred -----------------chhhhcCCCCCcCHhHHHHHHHHHHh
Confidence 00124579999999999999999875
No 19
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=98.78 E-value=1.7e-07 Score=79.56 Aligned_cols=157 Identities=17% Similarity=0.094 Sum_probs=85.3
Q ss_pred ceeEEEEechhhhhHhhc------CC-----------ChhhHHhhHHHHHHHHHHHHHHHHHh-CCceEEEecCCCCCCc
Q 045313 15 KGLYTFDIGQNDLAGAFY------SK-----------TIDQVLASIPKILEEFETGLRRLYDE-GARNFWIHNTGPLGCL 76 (234)
Q Consensus 15 ~sL~~i~iG~ND~~~~~~------~~-----------~~~~~~~~v~~~i~~~~~~i~~L~~~-Gar~~vv~~lpplg~~ 76 (234)
-.+++|++|+||+..... .. .........+...+++...|++|.+. .--+|++++.|++--
T Consensus 81 ~dlV~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~i~~~~p~a~I~~~gyp~~~~- 159 (259)
T cd01823 81 TDLVTITIGGNDLGFADVVKACILTGGGSSLAQEKGAADGARDAALDEVGARLKAVLDRIRERAPNARVVVVGYPRLFP- 159 (259)
T ss_pred CCEEEEEECccccchHHHHHHHhhccCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEeccccccc-
Confidence 478999999999865321 00 00111233455667777777777754 334688999876521
Q ss_pred cchhhhccC---CcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHHHHHHHcccCCCccccccc
Q 045313 77 AQNVAKFGT---DLSMLDELGCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIKYSLIANYSRYGFEQPIMA 153 (234)
Q Consensus 77 P~~~~~~~~---~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~ 153 (234)
.-...... ..... ........++....+|..+++...+ +.+.++.++|++..+..- ..
T Consensus 160 -~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ln~~i~~~a~~----~~~~~v~fvD~~~~f~~~-------------~~ 220 (259)
T cd01823 160 -PDGGDCDKSCSPGTPL-TPADRPELNQLVDKLNALIRRAAAD----AGDYKVRFVDTDAPFAGH-------------RA 220 (259)
T ss_pred -CCCCCcccccccCCCC-CHHHHHHHHHHHHHHHHHHHHHHHH----hCCceEEEEECCCCcCCC-------------cc
Confidence 00000000 00000 0011234566777777777766543 323568999998766521 12
Q ss_pred cccccCCcCCCCCCcccCCCcccCCcccccccCCCCCCceeccCCChhHHHHHHHHHHHhc
Q 045313 154 CCGVGGAPLNYNSGISCGQTKVINGTSVTAKACSDSTEYVNWDGIHYTEAANQYVSTQILT 214 (234)
Q Consensus 154 Cc~~g~~~~n~~~~~~C~~~~~~~~~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 214 (234)
|.. . .. +.. -.+....+.-|++||+++||+.||+.+.+
T Consensus 221 ~~~-~--~~-------~~~-------------~~~~~~~~~~d~~HPn~~G~~~~A~~i~~ 258 (259)
T cd01823 221 CSP-D--PW-------SRS-------------VLDLLPTRQGKPFHPNAAGHRAIADLIVD 258 (259)
T ss_pred ccC-C--Cc-------ccc-------------ccCCCCCCCccCCCCCHHHHHHHHHHHhh
Confidence 222 1 00 000 00122334579999999999999999875
No 20
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=98.74 E-value=9.3e-08 Score=75.02 Aligned_cols=94 Identities=16% Similarity=0.231 Sum_probs=59.6
Q ss_pred CceeEEEEechhhhhHhhcCCChhhHHhhHHHHHHHHHHHHHHHHHhCCceEEEecCCCCCCccchhhhccCCcCCCCCC
Q 045313 14 SKGLYTFDIGQNDLAGAFYSKTIDQVLASIPKILEEFETGLRRLYDEGARNFWIHNTGPLGCLAQNVAKFGTDLSMLDEL 93 (234)
Q Consensus 14 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~~i~~~~~~i~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d~~ 93 (234)
.-.+++|.+|+||.... .......++..+++.+.|+.+...| +++++++||..-.+..
T Consensus 61 ~~d~vvi~~G~ND~~~~------~~~~~~~~~~~~~l~~~i~~~~~~~--~vi~~~~~~~~~~~~~-------------- 118 (179)
T PF13472_consen 61 KPDLVVISFGTNDVLNG------DENDTSPEQYEQNLRRIIEQLRPHG--PVILVSPPPRGPDPRD-------------- 118 (179)
T ss_dssp TCSEEEEE--HHHHCTC------TTCHHHHHHHHHHHHHHHHHHHTTS--EEEEEE-SCSSSSTTT--------------
T ss_pred CCCEEEEEccccccccc------ccccccHHHHHHHHHHHHHhhcccC--cEEEecCCCccccccc--------------
Confidence 33689999999998762 1111234567788888888888778 8888888875433211
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHHH
Q 045313 94 GCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIKY 136 (234)
Q Consensus 94 ~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~ 136 (234)
.+..........+|+.+++..+ + ..+.++|+...+.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~a~----~---~~~~~id~~~~~~ 154 (179)
T PF13472_consen 119 PKQDYLNRRIDRYNQAIRELAK----K---YGVPFIDLFDAFD 154 (179)
T ss_dssp THTTCHHHHHHHHHHHHHHHHH----H---CTEEEEEHHHHHB
T ss_pred ccchhhhhhHHHHHHHHHHHHH----H---cCCEEEECHHHHc
Confidence 1123445667778887776554 3 2788999988754
No 21
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.73 E-value=1.2e-07 Score=76.22 Aligned_cols=122 Identities=11% Similarity=0.102 Sum_probs=78.9
Q ss_pred ceeEEEEechhhhhHhhcCCChhhHHhhHHHHHHHHHHHHHHHHHhCCceEEEecCCCCCCccchhhhccCCcCCCCCCC
Q 045313 15 KGLYTFDIGQNDLAGAFYSKTIDQVLASIPKILEEFETGLRRLYDEGARNFWIHNTGPLGCLAQNVAKFGTDLSMLDELG 94 (234)
Q Consensus 15 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~~i~~~~~~i~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d~~~ 94 (234)
-++++|.+|+||.... .+. .+..+++.+.|+.+.+.|++ ++++..||..-.+...
T Consensus 60 ~d~v~i~~G~ND~~~~---~~~-------~~~~~~~~~li~~~~~~~~~-~il~~~~p~~~~~~~~-------------- 114 (183)
T cd04501 60 PAVVIIMGGTNDIIVN---TSL-------EMIKDNIRSMVELAEANGIK-VILASPLPVDDYPWKP-------------- 114 (183)
T ss_pred CCEEEEEeccCccccC---CCH-------HHHHHHHHHHHHHHHHCCCc-EEEEeCCCcCccccch--------------
Confidence 4689999999997532 122 24566677777777788886 5556666654322110
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHHHHHHHcccCCCccccccccccccCCcCCCCCCcccCCCc
Q 045313 95 CVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIKYSLIANYSRYGFEQPIMACCGVGGAPLNYNSGISCGQTK 174 (234)
Q Consensus 95 c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~n~~~~~~C~~~~ 174 (234)
+....+.....||..+++..++ .++.++|+++.+.+... .
T Consensus 115 ~~~~~~~~~~~~n~~~~~~a~~-------~~v~~vd~~~~~~~~~~-----------------~---------------- 154 (183)
T cd04501 115 QWLRPANKLKSLNRWLKDYARE-------NGLLFLDFYSPLLDERN-----------------V---------------- 154 (183)
T ss_pred hhcchHHHHHHHHHHHHHHHHH-------cCCCEEechhhhhcccc-----------------c----------------
Confidence 1123345677888887776543 25889999987664210 0
Q ss_pred ccCCcccccccCCCCCCceeccCCChhHHHHHHHHHHHhc
Q 045313 175 VINGTSVTAKACSDSTEYVNWDGIHYTEAANQYVSTQILT 214 (234)
Q Consensus 175 ~~~~~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 214 (234)
.....+..|++||+++||+++|+.+.+
T Consensus 155 -------------~~~~~~~~DgvHp~~~Gy~~~a~~i~~ 181 (183)
T cd04501 155 -------------GLKPGLLTDGLHPSREGYRVMAPLAEK 181 (183)
T ss_pred -------------cccccccCCCCCCCHHHHHHHHHHHHH
Confidence 011234579999999999999999875
No 22
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=98.72 E-value=8.9e-08 Score=78.09 Aligned_cols=131 Identities=13% Similarity=0.102 Sum_probs=81.4
Q ss_pred CceeEEEEechhhhhHhhcCCChhhHHhhHHHHHHHHHHHHHHHHHhCCceEEEecCCCCCCccchhhhccCCcCCCCCC
Q 045313 14 SKGLYTFDIGQNDLAGAFYSKTIDQVLASIPKILEEFETGLRRLYDEGARNFWIHNTGPLGCLAQNVAKFGTDLSMLDEL 93 (234)
Q Consensus 14 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~~i~~~~~~i~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d~~ 93 (234)
.-++++|.+|+||......... .-++...+++.+.|+++.+.|++ +++++.||... +.. .
T Consensus 65 ~pdlVii~~G~ND~~~~~~~~~-----~~~~~~~~nl~~ii~~~~~~~~~-~il~tp~~~~~-------~~~-------~ 124 (198)
T cd01821 65 PGDYVLIQFGHNDQKPKDPEYT-----EPYTTYKEYLRRYIAEARAKGAT-PILVTPVTRRT-------FDE-------G 124 (198)
T ss_pred CCCEEEEECCCCCCCCCCCCCC-----CcHHHHHHHHHHHHHHHHHCCCe-EEEECCccccc-------cCC-------C
Confidence 3489999999999754211000 11345677788888888888986 55555444211 100 0
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHHHHHHHcccCCCccccccccccccCCcCCCCCCcccCCC
Q 045313 94 GCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIKYSLIANYSRYGFEQPIMACCGVGGAPLNYNSGISCGQT 173 (234)
Q Consensus 94 ~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~n~~~~~~C~~~ 173 (234)
. ..+.....||+.+++..++. .+.++|++..+.+..+.-.. . + .
T Consensus 125 ~---~~~~~~~~~~~~~~~~a~~~-------~~~~vD~~~~~~~~~~~~g~---~---------~--~------------ 168 (198)
T cd01821 125 G---KVEDTLGDYPAAMRELAAEE-------GVPLIDLNAASRALYEAIGP---E---------K--S------------ 168 (198)
T ss_pred C---cccccchhHHHHHHHHHHHh-------CCCEEecHHHHHHHHHHhCh---H---------h--H------------
Confidence 0 12233567888877766532 47799999999876552100 0 0 0
Q ss_pred cccCCcccccccCCCCC-CceeccCCChhHHHHHHHHHHHhc
Q 045313 174 KVINGTSVTAKACSDST-EYVNWDGIHYTEAANQYVSTQILT 214 (234)
Q Consensus 174 ~~~~~~~~~~~~C~~p~-~ylfwD~~HPT~~~h~~iA~~~~~ 214 (234)
.+. .++..|++||+++||++||+.+.+
T Consensus 169 --------------~~~~~~~~~DgvHp~~~G~~~~a~~i~~ 196 (198)
T cd01821 169 --------------KKYFPEGPGDNTHFSEKGADVVARLVAE 196 (198)
T ss_pred --------------HhhCcCCCCCCCCCCHHHHHHHHHHHHh
Confidence 000 245679999999999999999876
No 23
>cd01824 Phospholipase_B_like Phospholipase-B_like. This subgroup of the SGNH-family of lipolytic enzymes may have both esterase and phospholipase-A/lysophospholipase activity. It's members may be involved in the conversion of phosphatidylcholine to fatty acids and glycerophosphocholine, perhaps in the context of dietary lipid uptake. Members may be membrane proteins. The tertiary fold of the SGNH-hydrolases is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; Its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases.
Probab=98.72 E-value=1.9e-07 Score=81.06 Aligned_cols=151 Identities=15% Similarity=0.096 Sum_probs=83.5
Q ss_pred eeEEEEechhhhhHhhcCCChhhHHhhHHHHHHHHHHHHHHHHHhCCc-eEEEecCCCCCCccchhhhccCCcCCCCCCC
Q 045313 16 GLYTFDIGQNDLAGAFYSKTIDQVLASIPKILEEFETGLRRLYDEGAR-NFWIHNTGPLGCLAQNVAKFGTDLSMLDELG 94 (234)
Q Consensus 16 sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~~i~~~~~~i~~L~~~Gar-~~vv~~lpplg~~P~~~~~~~~~~~~~d~~~ 94 (234)
.|++|+||+||+......... .......+++.+.|+.|.+..-| .|+++++|++..++........-. ..-...
T Consensus 121 klVtI~IG~ND~c~~~~~~~~----~~~~~~~~nL~~~L~~Lr~~~P~~~V~lv~~~~~~~l~~~~~~p~~c~-~~~~~~ 195 (288)
T cd01824 121 KLITIFIGGNDLCSLCEDANP----GSPQTFVKNLRKALDILRDEVPRAFVNLVGLLNVASLRSLTKKPLQCE-TLLAPE 195 (288)
T ss_pred cEEEEEecchhHhhhcccccC----cCHHHHHHHHHHHHHHHHHhCCCcEEEEEcCCCcHHHHHhccCCcccc-ccCCCc
Confidence 479999999998753211100 22345677888888888887755 466777777654443321100000 000112
Q ss_pred cc----------HHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHHHHHHHcccCCCccccccccccccCCcCCC
Q 045313 95 CV----------SGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIKYSLIANYSRYGFEQPIMACCGVGGAPLNY 164 (234)
Q Consensus 95 c~----------~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~n~ 164 (234)
|. +.+.++...|++.+++.++.-+-+..+..+++ +.++.+.+.. .
T Consensus 196 C~c~~~~~~~~~~~~~~~~~~y~~~~~eia~~~~~~~~~f~vv~---qPf~~~~~~~-------------------~--- 250 (288)
T cd01824 196 CPCLLGPTENSYQDLKKFYKEYQNEVEEIVESGEFDREDFAVVV---QPFFEDTSLP-------------------P--- 250 (288)
T ss_pred CCCcCCCCcchHHHHHHHHHHHHHHHHHHHhcccccccCccEEe---eCchhccccc-------------------c---
Confidence 32 35566777887777766553221122333333 2222221100 0
Q ss_pred CCCcccCCCcccCCcccccccCCCCCCceeccCCChhHHHHHHHHHHHhcC
Q 045313 165 NSGISCGQTKVINGTSVTAKACSDSTEYVNWDGIHYTEAANQYVSTQILTG 215 (234)
Q Consensus 165 ~~~~~C~~~~~~~~~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 215 (234)
.+ .. .-.+++-||++||+++||.++|+.+|+.
T Consensus 251 ------~~------------~g-~d~~~~~~D~~Hps~~G~~~ia~~lwn~ 282 (288)
T cd01824 251 ------LP------------DG-PDLSFFSPDCFHFSQRGHAIAANALWNN 282 (288)
T ss_pred ------cc------------CC-CcchhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 00 00 0125677999999999999999999874
No 24
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=98.71 E-value=1.5e-07 Score=77.93 Aligned_cols=118 Identities=16% Similarity=0.098 Sum_probs=75.7
Q ss_pred ceeEEEEechhhhhHhhcCCChhhHHhhHHHHHHHHHHHHHHHHHhC-CceEEEecCCCCCCccchhhhccCCcCCCCCC
Q 045313 15 KGLYTFDIGQNDLAGAFYSKTIDQVLASIPKILEEFETGLRRLYDEG-ARNFWIHNTGPLGCLAQNVAKFGTDLSMLDEL 93 (234)
Q Consensus 15 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~~i~~~~~~i~~L~~~G-ar~~vv~~lpplg~~P~~~~~~~~~~~~~d~~ 93 (234)
-.+++|++|+||+... .+. +.+.+++...|+++.+.. ..+|++++++|.+..|
T Consensus 90 pd~VvI~~G~ND~~~~---~~~-------~~~~~~l~~ii~~l~~~~P~~~Iil~~~~p~~~~~---------------- 143 (214)
T cd01820 90 PKVVVLLIGTNNIGHT---TTA-------EEIAEGILAIVEEIREKLPNAKILLLGLLPRGQNP---------------- 143 (214)
T ss_pred CCEEEEEecccccCCC---CCH-------HHHHHHHHHHHHHHHHHCCCCeEEEEeccCCCCCc----------------
Confidence 4789999999997532 122 345677777888777663 2468888887754321
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHHHHHHHcccCCCccccccccccccCCcCCCCCCcccCCC
Q 045313 94 GCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIKYSLIANYSRYGFEQPIMACCGVGGAPLNYNSGISCGQT 173 (234)
Q Consensus 94 ~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~n~~~~~~C~~~ 173 (234)
..+.+....+|+.+++.+. + ..++.++|++..+.+. .+ .
T Consensus 144 ---~~~~~~~~~~n~~l~~~~~----~--~~~v~~vd~~~~~~~~------------------~g--~------------ 182 (214)
T cd01820 144 ---NPLRERNAQVNRLLAVRYD----G--LPNVTFLDIDKGFVQS------------------DG--T------------ 182 (214)
T ss_pred ---hhHHHHHHHHHHHHHHHhc----C--CCCEEEEeCchhhccc------------------CC--C------------
Confidence 1223445677777665432 2 2368899987665411 01 0
Q ss_pred cccCCcccccccCCCCCCceeccCCChhHHHHHHHHHHHhc
Q 045313 174 KVINGTSVTAKACSDSTEYVNWDGIHYTEAANQYVSTQILT 214 (234)
Q Consensus 174 ~~~~~~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 214 (234)
..+.++.|++||+++||++||+.+.+
T Consensus 183 ---------------~~~~~~~DGlHpn~~Gy~~~a~~l~~ 208 (214)
T cd01820 183 ---------------ISHHDMPDYLHLTAAGYRKWADALHP 208 (214)
T ss_pred ---------------cCHhhcCCCCCCCHHHHHHHHHHHHH
Confidence 11124579999999999999998876
No 25
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.70 E-value=3e-07 Score=73.16 Aligned_cols=119 Identities=22% Similarity=0.282 Sum_probs=75.4
Q ss_pred CceeEEEEechhhhhHhhcCCChhhHHhhHHHHHHHHHHHHHHHHHhCC-ceEEEecCCCCCCccchhhhccCCcCCCCC
Q 045313 14 SKGLYTFDIGQNDLAGAFYSKTIDQVLASIPKILEEFETGLRRLYDEGA-RNFWIHNTGPLGCLAQNVAKFGTDLSMLDE 92 (234)
Q Consensus 14 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~~i~~~~~~i~~L~~~Ga-r~~vv~~lpplg~~P~~~~~~~~~~~~~d~ 92 (234)
.-.+++|.+|+||+... .+ .+...+++.+.|+++.+.+. .+++++.+||. |. .
T Consensus 50 ~p~~vvi~~G~ND~~~~---~~-------~~~~~~~~~~lv~~i~~~~~~~~iil~~~~p~---~~--~----------- 103 (171)
T cd04502 50 QPRRVVLYAGDNDLASG---RT-------PEEVLRDFRELVNRIRAKLPDTPIAIISIKPS---PA--R----------- 103 (171)
T ss_pred CCCEEEEEEecCcccCC---CC-------HHHHHHHHHHHHHHHHHHCCCCcEEEEEecCC---Cc--c-----------
Confidence 34689999999997432 22 23567778888888887753 34667665542 10 0
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHHHHHHHcccCCCccccccccccccCCcCCCCCCcccCC
Q 045313 93 LGCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIKYSLIANYSRYGFEQPIMACCGVGGAPLNYNSGISCGQ 172 (234)
Q Consensus 93 ~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~n~~~~~~C~~ 172 (234)
...+.....+|+.+++..+ + ...+.++|++..+.+.- + .
T Consensus 104 ----~~~~~~~~~~n~~~~~~a~----~--~~~v~~vD~~~~~~~~~------------------~--~----------- 142 (171)
T cd04502 104 ----WALRPKIRRFNALLKELAE----T--RPNLTYIDVASPMLDAD------------------G--K----------- 142 (171)
T ss_pred ----hhhHHHHHHHHHHHHHHHh----c--CCCeEEEECcHHHhCCC------------------C--C-----------
Confidence 0122335677777766543 1 23578999987664210 0 0
Q ss_pred CcccCCcccccccCCCCCCceeccCCChhHHHHHHHHHHHhc
Q 045313 173 TKVINGTSVTAKACSDSTEYVNWDGIHYTEAANQYVSTQILT 214 (234)
Q Consensus 173 ~~~~~~~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 214 (234)
...+++..|++||+++||+++|+.+..
T Consensus 143 ---------------~~~~~~~~DGlH~n~~Gy~~~a~~l~~ 169 (171)
T cd04502 143 ---------------PRAELFQEDGLHLNDAGYALWRKVIKP 169 (171)
T ss_pred ---------------cChhhcCCCCCCCCHHHHHHHHHHHHh
Confidence 012445689999999999999998864
No 26
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=98.66 E-value=2.3e-07 Score=74.48 Aligned_cols=117 Identities=17% Similarity=0.187 Sum_probs=76.1
Q ss_pred CceeEEEEechhhhhHhhcCCChhhHHhhHHHHHHHHHHHHHHHHHhCCceEEEecCCCC-CCccchhhhccCCcCCCCC
Q 045313 14 SKGLYTFDIGQNDLAGAFYSKTIDQVLASIPKILEEFETGLRRLYDEGARNFWIHNTGPL-GCLAQNVAKFGTDLSMLDE 92 (234)
Q Consensus 14 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~~i~~~~~~i~~L~~~Gar~~vv~~lppl-g~~P~~~~~~~~~~~~~d~ 92 (234)
.-.+++|.+|+||.... ..+. .+..+++...|+++...+++ ++++++||. +..|..
T Consensus 67 ~~d~vii~~G~ND~~~~--~~~~-------~~~~~~~~~~i~~i~~~~~~-vil~~~~~~~~~~~~~------------- 123 (185)
T cd01832 67 RPDLVTLLAGGNDILRP--GTDP-------DTYRADLEEAVRRLRAAGAR-VVVFTIPDPAVLEPFR------------- 123 (185)
T ss_pred CCCEEEEeccccccccC--CCCH-------HHHHHHHHHHHHHHHhCCCE-EEEecCCCccccchhH-------------
Confidence 44689999999997541 1122 34566677777777767775 788888877 222111
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHHHHHHHcccCCCccccccccccccCCcCCCCCCcccCC
Q 045313 93 LGCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIKYSLIANYSRYGFEQPIMACCGVGGAPLNYNSGISCGQ 172 (234)
Q Consensus 93 ~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~n~~~~~~C~~ 172 (234)
...+.....+|+.|++..++ .++.++|++..+. + .
T Consensus 124 ----~~~~~~~~~~n~~l~~~a~~-------~~v~~vd~~~~~~------------------~--~-------------- 158 (185)
T cd01832 124 ----RRVRARLAAYNAVIRAVAAR-------YGAVHVDLWEHPE------------------F--A-------------- 158 (185)
T ss_pred ----HHHHHHHHHHHHHHHHHHHH-------cCCEEEecccCcc------------------c--C--------------
Confidence 12344577888887776553 2578888865432 0 0
Q ss_pred CcccCCcccccccCCCCCCceeccCCChhHHHHHHHHHHHhc
Q 045313 173 TKVINGTSVTAKACSDSTEYVNWDGIHYTEAANQYVSTQILT 214 (234)
Q Consensus 173 ~~~~~~~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 214 (234)
..+++.-|++||+++||++||+.+++
T Consensus 159 ----------------~~~~~~~DgiHpn~~G~~~~A~~i~~ 184 (185)
T cd01832 159 ----------------DPRLWASDRLHPSAAGHARLAALVLA 184 (185)
T ss_pred ----------------CccccccCCCCCChhHHHHHHHHHhh
Confidence 00123359999999999999999875
No 27
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.59 E-value=9.5e-07 Score=70.83 Aligned_cols=118 Identities=16% Similarity=0.140 Sum_probs=71.1
Q ss_pred CceeEEEEechhhhhHhhcCCChhhHHhhHHHHHHHHHHHHHHHHHhCC-ceEEEecCCCCCCccchhhhccCCcCCCCC
Q 045313 14 SKGLYTFDIGQNDLAGAFYSKTIDQVLASIPKILEEFETGLRRLYDEGA-RNFWIHNTGPLGCLAQNVAKFGTDLSMLDE 92 (234)
Q Consensus 14 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~~i~~~~~~i~~L~~~Ga-r~~vv~~lpplg~~P~~~~~~~~~~~~~d~ 92 (234)
.-.+++|.+|+||.... ....+++...|++|.+.+. .+|++++.||. |.....
T Consensus 57 ~pd~vii~~G~ND~~~~-------------~~~~~~~~~~i~~i~~~~p~~~iil~~~~~~---~~~~~~---------- 110 (177)
T cd01844 57 PADLYIIDCGPNIVGAE-------------AMVRERLGPLVKGLRETHPDTPILLVSPRYC---PDAELT---------- 110 (177)
T ss_pred CCCEEEEEeccCCCccH-------------HHHHHHHHHHHHHHHHHCcCCCEEEEecCCC---CccccC----------
Confidence 34789999999996321 0457788888888888764 45777776653 221111
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHHHHHHHcccCCCccccccccccccCCcCCCCCCcccCC
Q 045313 93 LGCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIKYSLIANYSRYGFEQPIMACCGVGGAPLNYNSGISCGQ 172 (234)
Q Consensus 93 ~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~n~~~~~~C~~ 172 (234)
.+.....++....+|.. ++.++++ ...++.++|.+.++..
T Consensus 111 ~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~v~~id~~~~~~~----------------------------------- 150 (177)
T cd01844 111 PGRGKLTLAVRRALREA----FEKLRAD-GVPNLYYLDGEELLGP----------------------------------- 150 (177)
T ss_pred cchhHHHHHHHHHHHHH----HHHHHhc-CCCCEEEecchhhcCC-----------------------------------
Confidence 01122333444444444 3444332 2347888887533210
Q ss_pred CcccCCcccccccCCCCCCceeccCCChhHHHHHHHHHHHhc
Q 045313 173 TKVINGTSVTAKACSDSTEYVNWDGIHYTEAANQYVSTQILT 214 (234)
Q Consensus 173 ~~~~~~~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 214 (234)
+.-++.|++|||++||++||+.+..
T Consensus 151 -----------------~~~~~~DglHpn~~Gy~~~a~~l~~ 175 (177)
T cd01844 151 -----------------DGEALVDGIHPTDLGHMRYADRFEP 175 (177)
T ss_pred -----------------CCCCCCCCCCCCHHHHHHHHHHHhh
Confidence 0014579999999999999998875
No 28
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.52 E-value=3.5e-07 Score=73.54 Aligned_cols=126 Identities=10% Similarity=0.054 Sum_probs=75.7
Q ss_pred ceeEEEEechhhhhHhhcCCChhhHHhhHHHHHHHHHHHHHHHHHh-CCceEEEecCCCCCCccchhhhccCCcCCCCCC
Q 045313 15 KGLYTFDIGQNDLAGAFYSKTIDQVLASIPKILEEFETGLRRLYDE-GARNFWIHNTGPLGCLAQNVAKFGTDLSMLDEL 93 (234)
Q Consensus 15 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~~i~~~~~~i~~L~~~-Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d~~ 93 (234)
-++++|.+|+||.... ..+ .+...+++...|+++.+. ...+|++++.||....+..
T Consensus 57 pd~Vii~~G~ND~~~~--~~~-------~~~~~~~~~~li~~i~~~~~~~~iv~~~~~~~~~~~~~-------------- 113 (189)
T cd01825 57 PDLVILSYGTNEAFNK--QLN-------ASEYRQQLREFIKRLRQILPNASILLVGPPDSLQKTGA-------------- 113 (189)
T ss_pred CCEEEEECCCcccccC--CCC-------HHHHHHHHHHHHHHHHHHCCCCeEEEEcCCchhccCCC--------------
Confidence 3689999999996432 112 234567777777777774 4556888887664322210
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHHHHHHHcccCCCccccccccccccCCcCCCCCCcccCCC
Q 045313 94 GCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIKYSLIANYSRYGFEQPIMACCGVGGAPLNYNSGISCGQT 173 (234)
Q Consensus 94 ~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~n~~~~~~C~~~ 173 (234)
+....+.....+|..+++..+ ++ .+.++|+++.+.+. |+.
T Consensus 114 -~~~~~~~~~~~~~~~~~~~a~----~~---~v~~vd~~~~~~~~----------------~~~---------------- 153 (189)
T cd01825 114 -GRWRTPPGLDAVIAAQRRVAK----EE---GIAFWDLYAAMGGE----------------GGI---------------- 153 (189)
T ss_pred -CCcccCCcHHHHHHHHHHHHH----Hc---CCeEEeHHHHhCCc----------------chh----------------
Confidence 001112234667766666543 32 37899998775321 000
Q ss_pred cccCCcccccccCCCCCCceeccCCChhHHHHHHHHHHHhc
Q 045313 174 KVINGTSVTAKACSDSTEYVNWDGIHYTEAANQYVSTQILT 214 (234)
Q Consensus 174 ~~~~~~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 214 (234)
.......++..|++|||++||+.||+.+.+
T Consensus 154 -----------~~~~~~~~~~~Dg~Hp~~~G~~~~a~~i~~ 183 (189)
T cd01825 154 -----------WQWAEPGLARKDYVHLTPRGYERLANLLYE 183 (189)
T ss_pred -----------hHhhcccccCCCcccCCcchHHHHHHHHHH
Confidence 000112345689999999999999998875
No 29
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.50 E-value=6e-07 Score=72.76 Aligned_cols=123 Identities=15% Similarity=0.163 Sum_probs=70.5
Q ss_pred CceeEEEEechhhhhHhhcCCChhhHHhhHHHHHHHHHHHHHHHHHhCCceEEEecCCCCCCccchhhhccCCcCCCCCC
Q 045313 14 SKGLYTFDIGQNDLAGAFYSKTIDQVLASIPKILEEFETGLRRLYDEGARNFWIHNTGPLGCLAQNVAKFGTDLSMLDEL 93 (234)
Q Consensus 14 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~~i~~~~~~i~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d~~ 93 (234)
+-.+++|.+|+||............ .+...+.+...++++ +.++ +++++++||..-..
T Consensus 69 ~pd~V~i~~G~ND~~~~~~~~~~~~----~~~~~~~~~~ii~~~-~~~~-~vi~~~~~p~~~~~---------------- 126 (193)
T cd01835 69 VPNRLVLSVGLNDTARGGRKRPQLS----ARAFLFGLNQLLEEA-KRLV-PVLVVGPTPVDEAK---------------- 126 (193)
T ss_pred CCCEEEEEecCcccccccCcccccC----HHHHHHHHHHHHHHH-hcCC-cEEEEeCCCccccc----------------
Confidence 3479999999999865421100011 112233333333333 2344 47777777653110
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHHHHHHHcccCCCccccccccccccCCcCCCCCCcccCCC
Q 045313 94 GCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIKYSLIANYSRYGFEQPIMACCGVGGAPLNYNSGISCGQT 173 (234)
Q Consensus 94 ~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~n~~~~~~C~~~ 173 (234)
....+.....+|+.+++..++ ..+.++|++..+.+. + . .
T Consensus 127 --~~~~~~~~~~~n~~~~~~a~~-------~~~~~vd~~~~~~~~---~---------------~--~------------ 165 (193)
T cd01835 127 --MPYSNRRIARLETAFAEVCLR-------RDVPFLDTFTPLLNH---P---------------Q--W------------ 165 (193)
T ss_pred --cchhhHHHHHHHHHHHHHHHH-------cCCCeEeCccchhcC---c---------------H--H------------
Confidence 002245567788887776543 246799998766531 0 0 0
Q ss_pred cccCCcccccccCCCCCCceeccCCChhHHHHHHHHHHHhc
Q 045313 174 KVINGTSVTAKACSDSTEYVNWDGIHYTEAANQYVSTQILT 214 (234)
Q Consensus 174 ~~~~~~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 214 (234)
...++..|++||+++||++||+.++.
T Consensus 166 ---------------~~~~~~~Dg~Hpn~~G~~~~a~~~~~ 191 (193)
T cd01835 166 ---------------RRELAATDGIHPNAAGYGWLAWLVLH 191 (193)
T ss_pred ---------------HHhhhccCCCCCCHHHHHHHHHHHhc
Confidence 01123369999999999999998864
No 30
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=98.48 E-value=8.4e-07 Score=72.28 Aligned_cols=43 Identities=9% Similarity=0.088 Sum_probs=31.3
Q ss_pred ceeEEEEechhhhhHhhcCCChhhHHhhHHHHHHHHHHHHHHHHHhCCceEEE
Q 045313 15 KGLYTFDIGQNDLAGAFYSKTIDQVLASIPKILEEFETGLRRLYDEGARNFWI 67 (234)
Q Consensus 15 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~~i~~~~~~i~~L~~~Gar~~vv 67 (234)
-++++|.+|+||... +.+. +...+++.+.++++.+.|++.+++
T Consensus 72 pd~Vii~~GtND~~~---~~~~-------~~~~~~l~~li~~~~~~~~~~ill 114 (191)
T PRK10528 72 PRWVLVELGGNDGLR---GFPP-------QQTEQTLRQIIQDVKAANAQPLLM 114 (191)
T ss_pred CCEEEEEeccCcCcc---CCCH-------HHHHHHHHHHHHHHHHcCCCEEEE
Confidence 478999999999743 1222 355777788888888889887665
No 31
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.48 E-value=1.7e-06 Score=69.71 Aligned_cols=118 Identities=16% Similarity=0.148 Sum_probs=70.4
Q ss_pred ceeEEEEechhhhhHhhcCCChhhHHhhHHHHHHHHHHHHHHHHHhCC-ceEEEecCCCCCCccchhhhccCCcCCCCCC
Q 045313 15 KGLYTFDIGQNDLAGAFYSKTIDQVLASIPKILEEFETGLRRLYDEGA-RNFWIHNTGPLGCLAQNVAKFGTDLSMLDEL 93 (234)
Q Consensus 15 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~~i~~~~~~i~~L~~~Ga-r~~vv~~lpplg~~P~~~~~~~~~~~~~d~~ 93 (234)
-++++|.+|+||..... ..+ .+...+++...|+++.+.+. .++++.+.||......
T Consensus 68 pd~Vii~~G~ND~~~~~-~~~-------~~~~~~~l~~li~~i~~~~~~~~iil~t~~p~~~~~~--------------- 124 (188)
T cd01827 68 PNIVIIKLGTNDAKPQN-WKY-------KDDFKKDYETMIDSFQALPSKPKIYICYPIPAYYGDG--------------- 124 (188)
T ss_pred CCEEEEEcccCCCCCCC-Ccc-------HHHHHHHHHHHHHHHHHHCCCCeEEEEeCCcccccCC---------------
Confidence 37899999999975421 111 12345667777777776654 3677777665432110
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHHHHHHHcccCCCccccccccccccCCcCCCCCCcccCCC
Q 045313 94 GCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIKYSLIANYSRYGFEQPIMACCGVGGAPLNYNSGISCGQT 173 (234)
Q Consensus 94 ~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~n~~~~~~C~~~ 173 (234)
+. ...+.....+|+.+++..+ + ..+.++|++..+. + .
T Consensus 125 ~~-~~~~~~~~~~~~~~~~~a~----~---~~~~~vD~~~~~~---------------------~--~------------ 161 (188)
T cd01827 125 GF-INDNIIKKEIQPMIDKIAK----K---LNLKLIDLHTPLK---------------------G--K------------ 161 (188)
T ss_pred Cc-cchHHHHHHHHHHHHHHHH----H---cCCcEEEcccccc---------------------C--C------------
Confidence 10 0112344566666655443 2 2466788875331 0 0
Q ss_pred cccCCcccccccCCCCCCceeccCCChhHHHHHHHHHHHhcC
Q 045313 174 KVINGTSVTAKACSDSTEYVNWDGIHYTEAANQYVSTQILTG 215 (234)
Q Consensus 174 ~~~~~~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 215 (234)
+ .+.-|++||+++||++||+.+.+.
T Consensus 162 ---------------~--~~~~Dg~Hpn~~G~~~~A~~i~~~ 186 (188)
T cd01827 162 ---------------P--ELVPDWVHPNEKGAYILAKVVYKA 186 (188)
T ss_pred ---------------c--cccCCCCCcCHHHHHHHHHHHHHH
Confidence 0 134699999999999999998763
No 32
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family. Acyloxyacyl-hydrolase is a leukocyte-secreted enzyme that deacetylates bacterial lipopolysaccharides.
Probab=98.41 E-value=4e-06 Score=72.57 Aligned_cols=55 Identities=11% Similarity=0.059 Sum_probs=39.4
Q ss_pred eeEEEEechhhhhHhhcCCChhhHHhhHHHHHHHHHHHHHHHHHhCCc--eEEEecCCCC
Q 045313 16 GLYTFDIGQNDLAGAFYSKTIDQVLASIPKILEEFETGLRRLYDEGAR--NFWIHNTGPL 73 (234)
Q Consensus 16 sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~~i~~~~~~i~~L~~~Gar--~~vv~~lppl 73 (234)
.+++|++|+||.....-... + ...++...+++.+.|+.|.+...+ +|+++++|++
T Consensus 124 ~lVtI~lGgND~C~g~~d~~--~-~tp~eefr~NL~~~L~~Lr~~lP~~s~ViLvgmpd~ 180 (305)
T cd01826 124 ALVIYSMIGNDVCNGPNDTI--N-HTTPEEFYENVMEALKYLDTKLPNGSHVILVGLVDG 180 (305)
T ss_pred eEEEEEeccchhhcCCCccc--c-CcCHHHHHHHHHHHHHHHHhcCCCCCEEEEEeccch
Confidence 78889999999865321110 1 233456678888999999988755 8999999984
No 33
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=98.35 E-value=3.1e-06 Score=66.19 Aligned_cols=22 Identities=23% Similarity=0.274 Sum_probs=19.6
Q ss_pred eeccCCChhHHHHHHHHHHHhc
Q 045313 193 VNWDGIHYTEAANQYVSTQILT 214 (234)
Q Consensus 193 lfwD~~HPT~~~h~~iA~~~~~ 214 (234)
+..|++||+++||+++|+.+.+
T Consensus 127 ~~~DgiHpn~~G~~~~a~~i~~ 148 (150)
T cd01840 127 FYGDGVHPNPAGAKLYAALIAK 148 (150)
T ss_pred hcCCCCCCChhhHHHHHHHHHH
Confidence 4569999999999999999875
No 34
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=98.33 E-value=4.9e-06 Score=66.07 Aligned_cols=47 Identities=13% Similarity=0.129 Sum_probs=31.8
Q ss_pred CceeEEEEechhhhhHhhcCCChhhHHhhHHHHHHHHHHHHHHHHHhCCceEEEecCC
Q 045313 14 SKGLYTFDIGQNDLAGAFYSKTIDQVLASIPKILEEFETGLRRLYDEGARNFWIHNTG 71 (234)
Q Consensus 14 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~~i~~~~~~i~~L~~~Gar~~vv~~lp 71 (234)
.-.+++|.+|+||.... .+. ....+++.+.|+++.+.|++ ++++++|
T Consensus 64 ~pd~v~i~~G~ND~~~~---~~~-------~~~~~~l~~li~~~~~~~~~-vil~~~~ 110 (177)
T cd01822 64 KPDLVILELGGNDGLRG---IPP-------DQTRANLRQMIETAQARGAP-VLLVGMQ 110 (177)
T ss_pred CCCEEEEeccCcccccC---CCH-------HHHHHHHHHHHHHHHHCCCe-EEEEecC
Confidence 34689999999996532 222 24566777778888778876 5555543
No 35
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=98.18 E-value=1.4e-05 Score=63.55 Aligned_cols=21 Identities=24% Similarity=0.143 Sum_probs=19.4
Q ss_pred eccCCChhHHHHHHHHHHHhc
Q 045313 194 NWDGIHYTEAANQYVSTQILT 214 (234)
Q Consensus 194 fwD~~HPT~~~h~~iA~~~~~ 214 (234)
+.|++||++++|++||+.+++
T Consensus 146 ~~DgiHPn~~G~~~iA~~l~~ 166 (169)
T cd01831 146 IGCDWHPTVAGHQKIAKHLLP 166 (169)
T ss_pred cCCCCCCCHHHHHHHHHHHHH
Confidence 579999999999999999876
No 36
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism]
Probab=98.15 E-value=7.4e-06 Score=67.13 Aligned_cols=146 Identities=14% Similarity=0.119 Sum_probs=94.5
Q ss_pred cccCCccccccCceeEEEEechhhhhHhhcCCChhhHHhhHHHHHHHHHHHHHHHHHhC-CceEEEecCCCCCCccchhh
Q 045313 3 LDKYIPAVDYFSKGLYTFDIGQNDLAGAFYSKTIDQVLASIPKILEEFETGLRRLYDEG-ARNFWIHNTGPLGCLAQNVA 81 (234)
Q Consensus 3 ~~~~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~~i~~~~~~i~~L~~~G-ar~~vv~~lpplg~~P~~~~ 81 (234)
+.+-+|+.+-++-++++|++|+||-...- ++.....--++.-++++.+.++-|-+.- -.++++++-||+...-....
T Consensus 57 L~~ifp~~~s~~p~lvtVffGaNDs~l~~--~~~~~~hvPl~Ey~dNlr~iv~~lks~~~~~riIlitPpp~de~~~~~~ 134 (245)
T KOG3035|consen 57 LPEIFPKGSSIQPVLVTVFFGANDSCLPE--PSSLGQHVPLEEYKDNLRKIVSHLKSLSPETRIILITPPPVDEEAWEKQ 134 (245)
T ss_pred hhhhccccccCCceEEEEEecCccccCCC--CCCCCCccCHHHHHHHHHHHHHHhhccCCcceEEEecCCCcCHHHHHHH
Confidence 44455666666778999999999954321 1110001113345677777777776654 34678888777764422222
Q ss_pred hccCCcCCCCCCCc---cHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHHHHHHHcccCCCcccccccccccc
Q 045313 82 KFGTDLSMLDELGC---VSGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIKYSLIANYSRYGFEQPIMACCGVG 158 (234)
Q Consensus 82 ~~~~~~~~~d~~~c---~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g 158 (234)
. ...| .++.|+....|+..+.+..+++ ++..+|..+.+++. .
T Consensus 135 ~---------~e~~~~~~~RtNe~~~~Ya~ac~~la~e~-------~l~~vdlws~~Q~~-------------------~ 179 (245)
T KOG3035|consen 135 E---------QEPYVLGPERTNETVGTYAKACANLAQEI-------GLYVVDLWSKMQES-------------------D 179 (245)
T ss_pred h---------ccchhccchhhhhHHHHHHHHHHHHHHHh-------CCeeeeHHhhhhhc-------------------c
Confidence 2 1123 3457999999999988877644 56788887766642 1
Q ss_pred CCcCCCCCCcccCCCcccCCcccccccCCCCCCceeccCCChhHHHHHHHHHHHhc
Q 045313 159 GAPLNYNSGISCGQTKVINGTSVTAKACSDSTEYVNWDGIHYTEAANQYVSTQILT 214 (234)
Q Consensus 159 ~~~~n~~~~~~C~~~~~~~~~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 214 (234)
. -.+-.||||+|.|..|++++.++++.
T Consensus 180 --d---------------------------w~~~~ltDGLHlS~~G~~ivf~Ei~k 206 (245)
T KOG3035|consen 180 --D---------------------------WQTSCLTDGLHLSPKGNKIVFDEILK 206 (245)
T ss_pred --c---------------------------HHHHHhccceeeccccchhhHHHHHH
Confidence 1 11125799999999999999999887
No 37
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism]
Probab=97.74 E-value=0.00025 Score=58.32 Aligned_cols=21 Identities=19% Similarity=0.212 Sum_probs=19.7
Q ss_pred ccCCChhHHHHHHHHHHHhcC
Q 045313 195 WDGIHYTEAANQYVSTQILTG 215 (234)
Q Consensus 195 wD~~HPT~~~h~~iA~~~~~~ 215 (234)
+|++||+.++|+.||+.+.+.
T Consensus 187 ~Dg~H~n~~Gy~~~a~~l~~~ 207 (216)
T COG2755 187 EDGLHPNAKGYQALAEALAEV 207 (216)
T ss_pred CCCCCcCHhhHHHHHHHHHHH
Confidence 999999999999999998864
No 38
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.44 E-value=0.02 Score=50.01 Aligned_cols=135 Identities=16% Similarity=0.203 Sum_probs=78.4
Q ss_pred ceeEEEEechhhhhHhhcCCChhhHHhhHHHHHHHHHHHHHHHHHhC---CceEEEecCCCCCCccchhhhccCCcCCCC
Q 045313 15 KGLYTFDIGQNDLAGAFYSKTIDQVLASIPKILEEFETGLRRLYDEG---ARNFWIHNTGPLGCLAQNVAKFGTDLSMLD 91 (234)
Q Consensus 15 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~~i~~~~~~i~~L~~~G---ar~~vv~~lpplg~~P~~~~~~~~~~~~~d 91 (234)
=+.++|.+|.||......+...... -.+.-.+++..-+++|.+.- --+|+.+++|+.- .
T Consensus 178 ~a~vVV~lGaND~q~~~~gd~~~kf--~S~~W~~eY~kRvd~~l~ia~~~~~~V~WvGmP~~r------~---------- 239 (354)
T COG2845 178 PAAVVVMLGANDRQDFKVGDVYEKF--RSDEWTKEYEKRVDAILKIAHTHKVPVLWVGMPPFR------K---------- 239 (354)
T ss_pred ccEEEEEecCCCHHhcccCCeeeec--CchHHHHHHHHHHHHHHHHhcccCCcEEEeeCCCcc------c----------
Confidence 3678889999998875432211110 01233455555555555433 3367888887642 1
Q ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHHHHHHHcccCCCccccccccccccCCcCCCCCCcccC
Q 045313 92 ELGCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIKYSLIANYSRYGFEQPIMACCGVGGAPLNYNSGISCG 171 (234)
Q Consensus 92 ~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~n~~~~~~C~ 171 (234)
+.+|+-...+|...+..++.+.. + ++|+++.+-+.-.+ .|- ..+
T Consensus 240 -----~~l~~dm~~ln~iy~~~vE~~~g-----k--~i~i~d~~v~e~G~-------------------~f~-----~~~ 283 (354)
T COG2845 240 -----KKLNADMVYLNKIYSKAVEKLGG-----K--FIDIWDGFVDEGGK-------------------DFV-----TTG 283 (354)
T ss_pred -----cccchHHHHHHHHHHHHHHHhCC-----e--EEEecccccccCCc-------------------eeE-----Eec
Confidence 25566788999999988887643 2 44555433322110 010 000
Q ss_pred CCcccCCcccccccCCCCCCceeccCCChhHHHHHHHHHHHhc
Q 045313 172 QTKVINGTSVTAKACSDSTEYVNWDGIHYTEAANQYVSTQILT 214 (234)
Q Consensus 172 ~~~~~~~~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 214 (234)
.. .|| .+-.+.-=||+|.|.+|-+.+|.++..
T Consensus 284 ~D--~NG---------q~vrlR~~DGIh~T~~Gkrkla~~~~k 315 (354)
T COG2845 284 VD--ING---------QPVRLRAKDGIHFTKEGKRKLAFYLEK 315 (354)
T ss_pred cc--cCC---------ceEEEeccCCceechhhHHHHHHHHHH
Confidence 00 111 133455579999999999999999876
No 39
>KOG3670 consensus Phospholipase [Lipid transport and metabolism]
Probab=96.07 E-value=0.14 Score=45.97 Aligned_cols=52 Identities=21% Similarity=0.166 Sum_probs=35.6
Q ss_pred ceeEEEEechhhhhHhhcCCChhhHHhhHHHHHHHHHHHHHHHHHhCCceEEEe
Q 045313 15 KGLYTFDIGQNDLAGAFYSKTIDQVLASIPKILEEFETGLRRLYDEGARNFWIH 68 (234)
Q Consensus 15 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~~i~~~~~~i~~L~~~Gar~~vv~ 68 (234)
--|+.||||+||+-..-.+. ++....++.-.++|.++|+.|.+.=-|.+|++
T Consensus 185 WKLi~IfIG~ND~c~~c~~~--~~~~~~~~~~~~~i~~Al~~L~~nvPR~iV~l 236 (397)
T KOG3670|consen 185 WKLITIFIGTNDLCAYCEGP--ETPPSPVDQHKRNIRKALEILRDNVPRTIVSL 236 (397)
T ss_pred eEEEEEEeccchhhhhccCC--CCCCCchhHHHHHHHHHHHHHHhcCCceEEEE
Confidence 36999999999987654331 11122344556778999999988877776554
No 40
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=95.69 E-value=0.059 Score=43.49 Aligned_cols=116 Identities=15% Similarity=0.199 Sum_probs=47.0
Q ss_pred CceeEEEEechhhhhHhhcCCChhhHHhhHHHHHHHHHHHHHHHHHhC-CceEEEecCCCCCCccchhhhccCCcCCCCC
Q 045313 14 SKGLYTFDIGQNDLAGAFYSKTIDQVLASIPKILEEFETGLRRLYDEG-ARNFWIHNTGPLGCLAQNVAKFGTDLSMLDE 92 (234)
Q Consensus 14 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~~i~~~~~~i~~L~~~G-ar~~vv~~lpplg~~P~~~~~~~~~~~~~d~ 92 (234)
..++|++..|.| . +.+ .+.+.+...|+.|.+.- -.-|+++.... ....
T Consensus 59 ~a~~~~ld~~~N-----~---~~~-------~~~~~~~~fv~~iR~~hP~tPIllv~~~~--~~~~-------------- 107 (178)
T PF14606_consen 59 DADLIVLDCGPN-----M---SPE-------EFRERLDGFVKTIREAHPDTPILLVSPIP--YPAG-------------- 107 (178)
T ss_dssp --SEEEEEESHH-----C---CTT-------THHHHHHHHHHHHHTT-SSS-EEEEE------TTT--------------
T ss_pred CCCEEEEEeecC-----C---CHH-------HHHHHHHHHHHHHHHhCCCCCEEEEecCC--cccc--------------
Confidence 448999999999 1 222 23445556666666543 34455554221 1111
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHHHHHHHcccCCCccccccccccccCCcCCCCCCcccCC
Q 045313 93 LGCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIKYSLIANYSRYGFEQPIMACCGVGGAPLNYNSGISCGQ 172 (234)
Q Consensus 93 ~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~g~~~~n~~~~~~C~~ 172 (234)
............+|+.+++.+++|+++ .+-++.++|--.++-+-
T Consensus 108 -~~~~~~~~~~~~~~~~~r~~v~~l~~~-g~~nl~~l~g~~llg~d---------------------------------- 151 (178)
T PF14606_consen 108 -YFDNSRGETVEEFREALREAVEQLRKE-GDKNLYYLDGEELLGDD---------------------------------- 151 (178)
T ss_dssp -TS--TTS--HHHHHHHHHHHHHHHHHT-T-TTEEEE-HHHCS-------------------------------------
T ss_pred -ccCchHHHHHHHHHHHHHHHHHHHHHc-CCCcEEEeCchhhcCcc----------------------------------
Confidence 111122345788999999999998754 46788888765432110
Q ss_pred CcccCCcccccccCCCCCCceeccCCChhHHHHHHHHHHHhc
Q 045313 173 TKVINGTSVTAKACSDSTEYVNWDGIHYTEAANQYVSTQILT 214 (234)
Q Consensus 173 ~~~~~~~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 214 (234)
.-..-|++|||+.||..+|+.+..
T Consensus 152 ------------------~e~tvDgvHP~DlG~~~~a~~l~~ 175 (178)
T PF14606_consen 152 ------------------HEATVDGVHPNDLGMMRMADALEP 175 (178)
T ss_dssp ------------------------------------------
T ss_pred ------------------cccccccccccccccccccccccc
Confidence 012379999999999999998754
No 41
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=93.59 E-value=1.9 Score=34.75 Aligned_cols=20 Identities=30% Similarity=0.574 Sum_probs=18.4
Q ss_pred ccCCChhHHHHHHHHHHHhc
Q 045313 195 WDGIHYTEAANQYVSTQILT 214 (234)
Q Consensus 195 wD~~HPT~~~h~~iA~~~~~ 214 (234)
.|++|.++.||+.+++.++.
T Consensus 161 ~DgVHwn~~a~r~ls~lll~ 180 (183)
T cd01842 161 RDGVHWNYVAHRRLSNLLLA 180 (183)
T ss_pred CCCcCcCHHHHHHHHHHHHH
Confidence 79999999999999998875
No 42
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=90.76 E-value=0.33 Score=43.38 Aligned_cols=71 Identities=21% Similarity=0.094 Sum_probs=52.8
Q ss_pred ccCceeEEEEechhhhhHhhcCCChhhHHhhHHHHHHHHHHHHHHHHHhCCceEEEecCCCCCCccchhhh
Q 045313 12 YFSKGLYTFDIGQNDLAGAFYSKTIDQVLASIPKILEEFETGLRRLYDEGARNFWIHNTGPLGCLAQNVAK 82 (234)
Q Consensus 12 ~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~~i~~~~~~i~~L~~~Gar~~vv~~lpplg~~P~~~~~ 82 (234)
...+.++.-|+|+||+.......+......-+......+.+++..++.++.-.||..+.|.++..|..+..
T Consensus 96 ~~~~~~~~~~a~gnd~A~gga~~~~~~~~~~i~~~~~~~~~Qv~~~l~a~~~~~v~~~~~~~~l~p~~l~~ 166 (370)
T COG3240 96 ADPNGLYIHWAGGNDLAVGGARSTEPNTGNSIGASATSLAQQVGAFLAAGQGGFVWPNYPAQGLDPSALYF 166 (370)
T ss_pred cCcccccCcccccccHhhhccccccccccccccccccchHHHHHHHHHhcCCccccccccccccCHHHHHH
Confidence 35667888999999998765322211111233455667788999999999999999999999999988764
No 43
>PLN02757 sirohydrochlorine ferrochelatase
Probab=87.08 E-value=1.8 Score=34.11 Aligned_cols=64 Identities=8% Similarity=0.109 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHhCCceEEEecCCCCCCccchhhhccCCcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEE
Q 045313 49 EFETGLRRLYDEGARNFWIHNTGPLGCLAQNVAKFGTDLSMLDELGCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITY 128 (234)
Q Consensus 49 ~~~~~i~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~ 128 (234)
.+.++|++|.+.|+++|+|+ |.++... .....-+.+.+.++++++|+.+|.+
T Consensus 59 sl~eal~~l~~~g~~~vvVv--------P~FL~~G--------------------~H~~~DIp~~v~~~~~~~p~~~i~~ 110 (154)
T PLN02757 59 SIKDAFGRCVEQGASRVIVS--------PFFLSPG--------------------RHWQEDIPALTAEAAKEHPGVKYLV 110 (154)
T ss_pred CHHHHHHHHHHCCCCEEEEE--------EhhhcCC--------------------cchHhHHHHHHHHHHHHCCCcEEEE
Confidence 36678888889999999985 7776541 1224557888889999999999987
Q ss_pred Eech---hHHHHHHH
Q 045313 129 VDIY---TIKYSLIA 140 (234)
Q Consensus 129 ~D~~---~~~~~i~~ 140 (234)
...- ..+.+++.
T Consensus 111 ~~pLG~~p~l~~ll~ 125 (154)
T PLN02757 111 TAPIGLHELMVDVVN 125 (154)
T ss_pred CCCCCCCHHHHHHHH
Confidence 7543 35555544
No 44
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=83.58 E-value=8.1 Score=32.33 Aligned_cols=62 Identities=19% Similarity=0.254 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHhCCceEEEecCCCCCCccchhhhccCCcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 045313 45 KILEEFETGLRRLYDEGARNFWIHNTGPLGCLAQNVAKFGTDLSMLDELGCVSGHNQAAKLFNLQLHALCKKLQGDYTDS 124 (234)
Q Consensus 45 ~~i~~~~~~i~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~ 124 (234)
....-+.+.++.|...|.|+|+++|-. ++ ....|...+++|++++++.
T Consensus 83 t~~~~l~di~~sl~~~Gf~~ivivngH---------------------gG-----------N~~~l~~~~~~l~~~~~~~ 130 (237)
T PF02633_consen 83 TLIALLRDILRSLARHGFRRIVIVNGH---------------------GG-----------NIAALEAAARELRQEYPGV 130 (237)
T ss_dssp HHHHHHHHHHHHHHHHT--EEEEEESS---------------------TT-----------HHHHHHHHHHHHHHHGCC-
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEEECC---------------------Hh-----------HHHHHHHHHHHHHhhCCCc
Confidence 345556777888999999999999721 11 1235667777888888899
Q ss_pred eEEEEechhHHHHH
Q 045313 125 NITYVDIYTIKYSL 138 (234)
Q Consensus 125 ~i~~~D~~~~~~~i 138 (234)
++.++|.+.+....
T Consensus 131 ~v~~~~~~~~~~~~ 144 (237)
T PF02633_consen 131 KVFVINWWQLAEDE 144 (237)
T ss_dssp EEEEEEGGGCSHCH
T ss_pred EEEEeechhccchh
Confidence 99999999886654
No 45
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=78.62 E-value=3.9 Score=29.19 Aligned_cols=54 Identities=13% Similarity=0.092 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHhCCceEEEecCCCCCCccchhhhccCCcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEE
Q 045313 49 EFETGLRRLYDEGARNFWIHNTGPLGCLAQNVAKFGTDLSMLDELGCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITY 128 (234)
Q Consensus 49 ~~~~~i~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~ 128 (234)
.+.+.+++|.+.|+++++|+ |.++... ......+.+.+.+++.++|+.+|.+
T Consensus 45 ~~~~~l~~l~~~g~~~v~vv--------Plfl~~G--------------------~h~~~dip~~~~~~~~~~~~~~i~~ 96 (101)
T cd03416 45 SLAEALDELAAQGATRIVVV--------PLFLLAG--------------------GHVKEDIPAALAAARARHPGVRIRY 96 (101)
T ss_pred CHHHHHHHHHHcCCCEEEEE--------eeEeCCC--------------------ccccccHHHHHHHHHHHCCCeEEEe
Confidence 35667888889999999885 6555431 1123456667777777888888877
Q ss_pred Ee
Q 045313 129 VD 130 (234)
Q Consensus 129 ~D 130 (234)
.+
T Consensus 97 ~~ 98 (101)
T cd03416 97 AP 98 (101)
T ss_pred cC
Confidence 54
No 46
>cd00384 ALAD_PBGS Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. They either contain a cysteine-rich zinc binding site (consensus DXCXCX(Y/F)X3G(H/Q)CG) or an aspartate-rich magnesium binding site (consensus DXALDX(Y/F)X3G(H/Q)DG). The cyste
Probab=77.01 E-value=9.1 Score=33.57 Aligned_cols=64 Identities=9% Similarity=0.035 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHHhCCceEEEecCCCCCCccchhhhccCCcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 045313 45 KILEEFETGLRRLYDEGARNFWIHNTGPLGCLAQNVAKFGTDLSMLDELGCVSGHNQAAKLFNLQLHALCKKLQGDYTDS 124 (234)
Q Consensus 45 ~~i~~~~~~i~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~ 124 (234)
..++.+.+.++++.++|.+.|+++++|.. ..+.. ...++ -|..+++.++.+++++|+.
T Consensus 48 ~s~d~l~~~~~~~~~~Gi~~v~LFgv~~~-Kd~~g-------s~A~~--------------~~g~v~~air~iK~~~p~l 105 (314)
T cd00384 48 LSVDSLVEEAEELADLGIRAVILFGIPEH-KDEIG-------SEAYD--------------PDGIVQRAIRAIKEAVPEL 105 (314)
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEECCCCC-CCCCc-------ccccC--------------CCChHHHHHHHHHHhCCCc
Confidence 45788899999999999999999998642 11110 01111 1345677888888999876
Q ss_pred eEEEEec
Q 045313 125 NITYVDI 131 (234)
Q Consensus 125 ~i~~~D~ 131 (234)
- ++.|+
T Consensus 106 ~-vi~Dv 111 (314)
T cd00384 106 V-VITDV 111 (314)
T ss_pred E-EEEee
Confidence 4 45554
No 47
>PRK13384 delta-aminolevulinic acid dehydratase; Provisional
Probab=76.83 E-value=8.8 Score=33.75 Aligned_cols=64 Identities=19% Similarity=0.128 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHHhCCceEEEecCCCCCCccchhhhccCCcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 045313 45 KILEEFETGLRRLYDEGARNFWIHNTGPLGCLAQNVAKFGTDLSMLDELGCVSGHNQAAKLFNLQLHALCKKLQGDYTDS 124 (234)
Q Consensus 45 ~~i~~~~~~i~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~ 124 (234)
..++.+.+.++++.+.|.+.|+++++|+. .-+ .+ ...++ =|..+++.++.+++.+|+.
T Consensus 58 ~sid~l~~~~~~~~~~Gi~~v~lFgv~~~-Kd~-----~g--s~A~~--------------~~g~v~~air~iK~~~pdl 115 (322)
T PRK13384 58 LPESALADEIERLYALGIRYVMPFGISHH-KDA-----KG--SDTWD--------------DNGLLARMVRTIKAAVPEM 115 (322)
T ss_pred ECHHHHHHHHHHHHHcCCCEEEEeCCCCC-CCC-----Cc--ccccC--------------CCChHHHHHHHHHHHCCCe
Confidence 44788889999999999999999998642 111 10 00111 1456677888899999987
Q ss_pred eEEEEec
Q 045313 125 NITYVDI 131 (234)
Q Consensus 125 ~i~~~D~ 131 (234)
- ++.|+
T Consensus 116 ~-vi~DV 121 (322)
T PRK13384 116 M-VIPDI 121 (322)
T ss_pred E-EEeee
Confidence 4 45554
No 48
>cd04824 eu_ALAD_PBGS_cysteine_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. The eukaryotic PBGSs represented by this model, which contain a cysteine-rich zinc binding motif (DXCXCX(Y/F)X3G(H/Q)CG), require zinc for their activity, they
Probab=76.31 E-value=8.8 Score=33.70 Aligned_cols=66 Identities=14% Similarity=0.071 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHHhCCceEEEecCCCCC-CccchhhhccCCcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 045313 45 KILEEFETGLRRLYDEGARNFWIHNTGPLG-CLAQNVAKFGTDLSMLDELGCVSGHNQAAKLFNLQLHALCKKLQGDYTD 123 (234)
Q Consensus 45 ~~i~~~~~~i~~L~~~Gar~~vv~~lpplg-~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~ 123 (234)
..++.+.+.++++.+.|.+.|+++++|+-. .-+.. ....++ =|..+++.++.+++++|+
T Consensus 48 ~s~d~l~~~~~~~~~~Gi~~v~LFgv~~~~~Kd~~~------gs~a~~--------------~~g~v~~air~iK~~~pd 107 (320)
T cd04824 48 YGVNRLEEFLRPLVAKGLRSVILFGVPLKPGKDDRS------GSAADD--------------EDGPVIQAIKLIREEFPE 107 (320)
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEeCCCccccCCcCc------cccccC--------------CCChHHHHHHHHHHhCCC
Confidence 347788899999999999999999986422 22210 001111 234567778888888887
Q ss_pred ceEEEEec
Q 045313 124 SNITYVDI 131 (234)
Q Consensus 124 ~~i~~~D~ 131 (234)
.- ++.|+
T Consensus 108 l~-vi~Dv 114 (320)
T cd04824 108 LL-IACDV 114 (320)
T ss_pred cE-EEEee
Confidence 64 45554
No 49
>PF01903 CbiX: CbiX; InterPro: IPR002762 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents the CbiX protein, which functions as a cobalt-chelatase in the anaerobic biosynthesis of cobalamin. It catalyses the insertion of cobalt into sirohydrochlorin. The structure of CbiX from Archaeoglobus fulgidus consists of a central mixed beta-sheet flanked by four alpha-helices, although it is about half the size of other Class II tetrapyrrole chelatases []. The CbiX proteins found in archaea appear to be shorter than those found in eubacteria [].; GO: 0016829 lyase activity, 0046872 metal ion binding, 0009236 cobalamin biosynthetic process; PDB: 2XWQ_C 2DJ5_A 1TJN_A 2XWS_A 3LYH_B 2JH3_D.
Probab=74.97 E-value=2.1 Score=30.82 Aligned_cols=56 Identities=13% Similarity=0.070 Sum_probs=37.4
Q ss_pred HHHHHHHHHHhCCceEEEecCCCCCCccchhhhccCCcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEE
Q 045313 50 FETGLRRLYDEGARNFWIHNTGPLGCLAQNVAKFGTDLSMLDELGCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITYV 129 (234)
Q Consensus 50 ~~~~i~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~ 129 (234)
+.+.+++|.+.|+++|+|+ |.++... .....-+.+.++.++.++|+.+|.+.
T Consensus 39 l~~~l~~l~~~g~~~ivvv--------P~fL~~G--------------------~h~~~DIp~~l~~~~~~~~~~~v~~~ 90 (105)
T PF01903_consen 39 LEEALERLVAQGARRIVVV--------PYFLFPG--------------------YHVKRDIPEALAEARERHPGIEVRVA 90 (105)
T ss_dssp CHHCCHHHHCCTCSEEEEE--------EESSSSS--------------------HHHHCHHHHHHCHHHHCSTTEEEEE-
T ss_pred HHHHHHHHHHcCCCeEEEE--------eeeecCc--------------------cchHhHHHHHHHHHHhhCCceEEEEC
Confidence 3456688888899999886 6665431 12223477788899999999998887
Q ss_pred echh
Q 045313 130 DIYT 133 (234)
Q Consensus 130 D~~~ 133 (234)
..-+
T Consensus 91 ~pLG 94 (105)
T PF01903_consen 91 PPLG 94 (105)
T ss_dssp --GG
T ss_pred CCCC
Confidence 6543
No 50
>cd04823 ALAD_PBGS_aspartate_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. All of PBGS_aspartate_rich contain an aspartate rich metal binding site with the general sequence DXALDX(Y/F)X3G(H/Q)DG. They also contain an allosteric magnesiu
Probab=74.17 E-value=11 Score=33.19 Aligned_cols=66 Identities=9% Similarity=0.094 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHhCCceEEEecCCCCCCccchhhhccCCcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 045313 45 KILEEFETGLRRLYDEGARNFWIHNTGPLGCLAQNVAKFGTDLSMLDELGCVSGHNQAAKLFNLQLHALCKKLQGDYTDS 124 (234)
Q Consensus 45 ~~i~~~~~~i~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~ 124 (234)
..++.+.+.++++.+.|.+.|++++++|-. .....+ ...++ =|..++..++.+++++|+.
T Consensus 51 ~s~d~l~~~v~~~~~~Gi~~v~lFgv~~~~----~KD~~g--s~A~~--------------~~g~v~~air~iK~~~p~l 110 (320)
T cd04823 51 LSIDELLKEAEEAVDLGIPAVALFPVTPPE----LKSEDG--SEAYN--------------PDNLVCRAIRAIKEAFPEL 110 (320)
T ss_pred eCHHHHHHHHHHHHHcCCCEEEEecCCCcc----cCCccc--ccccC--------------CCChHHHHHHHHHHhCCCc
Confidence 457888999999999999999999984311 111110 00011 1345677788888899886
Q ss_pred eEEEEec
Q 045313 125 NITYVDI 131 (234)
Q Consensus 125 ~i~~~D~ 131 (234)
- ++.|+
T Consensus 111 ~-vi~DV 116 (320)
T cd04823 111 G-IITDV 116 (320)
T ss_pred E-EEEee
Confidence 4 45565
No 51
>PRK09283 delta-aminolevulinic acid dehydratase; Validated
Probab=72.45 E-value=13 Score=32.79 Aligned_cols=64 Identities=5% Similarity=0.043 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHhCCceEEEecCCCCCCccchhhhccCCcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 045313 45 KILEEFETGLRRLYDEGARNFWIHNTGPLGCLAQNVAKFGTDLSMLDELGCVSGHNQAAKLFNLQLHALCKKLQGDYTDS 124 (234)
Q Consensus 45 ~~i~~~~~~i~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~ 124 (234)
..++.+.+.++++.+.|.+.|+++++|.. .-+... ..++ =|..+...++.+++++|+.
T Consensus 56 ~s~d~l~~~v~~~~~~Gi~av~LFgv~~~-Kd~~gs-------~A~~--------------~~g~v~rair~iK~~~p~l 113 (323)
T PRK09283 56 LSIDLLVKEAEEAVELGIPAVALFGVPEL-KDEDGS-------EAYN--------------PDGLVQRAIRAIKKAFPEL 113 (323)
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEeCcCCC-CCcccc-------cccC--------------CCCHHHHHHHHHHHhCCCc
Confidence 35778889999999999999999998432 111110 0111 1345677888888999886
Q ss_pred eEEEEec
Q 045313 125 NITYVDI 131 (234)
Q Consensus 125 ~i~~~D~ 131 (234)
- ++.|+
T Consensus 114 ~-vi~DV 119 (323)
T PRK09283 114 G-VITDV 119 (323)
T ss_pred E-EEEee
Confidence 4 45565
No 52
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised. They have been named GSCFA after a highly conserved N-terminal motif in the alignment, they are functionally uncharacterised.
Probab=72.23 E-value=24 Score=30.09 Aligned_cols=111 Identities=17% Similarity=0.145 Sum_probs=65.6
Q ss_pred cCceeEEEEechhhhhHhhc------C--CChh---hH-H-----hhHHHHHHHHHHHHHHHHHhCCceEEEecCCCCCC
Q 045313 13 FSKGLYTFDIGQNDLAGAFY------S--KTID---QV-L-----ASIPKILEEFETGLRRLYDEGARNFWIHNTGPLGC 75 (234)
Q Consensus 13 ~~~sL~~i~iG~ND~~~~~~------~--~~~~---~~-~-----~~v~~~i~~~~~~i~~L~~~Gar~~vv~~lpplg~ 75 (234)
..-++++|..|..=.+..-. + +-+. +. . -.++++++.+.+.++.|....-+-=+|+++.|+
T Consensus 100 ~~ad~~iiTLGtaevw~~~~~g~vv~nc~k~p~~~F~~~~~~f~~ls~~ei~~~l~~~~~~l~~~nP~~kiilTVSPV-- 177 (251)
T PF08885_consen 100 EEADVFIITLGTAEVWRDRETGRVVANCHKVPAGQFDPERYEFRNLSVEEILEDLEAIIDLLRSINPDIKIILTVSPV-- 177 (251)
T ss_pred HhCCEEEEeCCcHHHheeCCCCEEEecCCCccccccchhhhhhccCCHHHHHHHHHHHHHHHHhhCCCceEEEEeccc--
Confidence 34467888999876554321 0 0000 11 1 345778888888888888887766678888885
Q ss_pred ccchhhhccCCcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHHHHHHH
Q 045313 76 LAQNVAKFGTDLSMLDELGCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIKYSLIA 140 (234)
Q Consensus 76 ~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~ 140 (234)
|...+-.. .-.-..|..++ ..|+..+.+|.+++ .++.||=.|.++++-++
T Consensus 178 -rl~~T~~~---------~d~~~an~~SK---s~Lr~a~~~l~~~~--~~v~YFPSYEiv~d~lr 227 (251)
T PF08885_consen 178 -RLIATFRD---------RDGLVANQYSK---STLRAAAHELVRAF--DDVDYFPSYEIVMDELR 227 (251)
T ss_pred -hhhccccc---------ccchhhhhhhH---HHHHHHHHHHHhcC--CCceEcchHhhccCccc
Confidence 43332210 00112233343 35677778887765 46678888877775443
No 53
>PF00490 ALAD: Delta-aminolevulinic acid dehydratase; InterPro: IPR001731 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. This entry represents porphobilinogen (PBG) synthase (PBGS, or 5-aminoaevulinic acid dehydratase, or ALAD, 4.2.1.24 from EC), which functions during the second stage of tetrapyrrole biosynthesis. This enzyme catalyses a Knorr-type condensation reaction between two molecules of ALA to generate porphobilinogen, the pyrrolic building block used in later steps []. The structure of the enzyme is based on a TIM barrel topology made up of eight identical subunits, where each subunit binds to a metal ion that is essential for activity, usually zinc (in yeast, mammals and certain bacteria) or magnesium (in plants and other bacteria). A lysine has been implicated in the catalytic mechanism []. The lack of PBGS enzyme causes a rare porphyric disorder known as ALAD porphyria, which appears to involve conformational changes in the enzyme [.; GO: 0004655 porphobilinogen synthase activity, 0046872 metal ion binding, 0033014 tetrapyrrole biosynthetic process; PDB: 2C1H_A 1W1Z_A 1GZG_B 1W5O_B 1W5Q_B 2C18_A 1B4K_A 2C19_B 1W56_B 2C13_B ....
Probab=72.08 E-value=15 Score=32.39 Aligned_cols=65 Identities=9% Similarity=0.130 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHhCCceEEEecCCCCCCccchhhhccCCcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHhhcCCce
Q 045313 46 ILEEFETGLRRLYDEGARNFWIHNTGPLGCLAQNVAKFGTDLSMLDELGCVSGHNQAAKLFNLQLHALCKKLQGDYTDSN 125 (234)
Q Consensus 46 ~i~~~~~~i~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~ 125 (234)
.++.+.+.++++.+.|.+.|+++++.+ |......+ ...+ .=|..+.+.++.+++.+|+.
T Consensus 55 sid~l~~~v~~~~~~GI~~v~lFgvi~----~~~Kd~~g--s~a~--------------~~~g~v~~air~iK~~~pdl- 113 (324)
T PF00490_consen 55 SIDSLVKEVEEAVDLGIRAVILFGVID----PSKKDEEG--SEAY--------------NPDGLVQRAIRAIKKAFPDL- 113 (324)
T ss_dssp EHHHHHHHHHHHHHTT--EEEEEEE-S----CSC-BSS---GGGG--------------STTSHHHHHHHHHHHHSTTS-
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEeeCC----cccCCcch--hccc--------------CCCChHHHHHHHHHHhCCCc-
Confidence 467888999999999999999999832 21121110 0001 12345677788899999986
Q ss_pred EEEEec
Q 045313 126 ITYVDI 131 (234)
Q Consensus 126 i~~~D~ 131 (234)
+++.|+
T Consensus 114 ~vi~Dv 119 (324)
T PF00490_consen 114 LVITDV 119 (324)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 445665
No 54
>cd03414 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both CbiX and SirB are found in a wide range of bacteria.
Probab=65.77 E-value=23 Score=25.84 Aligned_cols=52 Identities=15% Similarity=0.153 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHhCCceEEEecCCCCCCccchhhhccCCcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEE
Q 045313 49 EFETGLRRLYDEGARNFWIHNTGPLGCLAQNVAKFGTDLSMLDELGCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITY 128 (234)
Q Consensus 49 ~~~~~i~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~ 128 (234)
.+.+.|++|.+.|+++++|. |.++... ... ..+...+.+++.+ |+.+|.+
T Consensus 46 ~~~~~l~~l~~~g~~~i~vv--------P~fL~~G--------------------~h~-~~i~~~~~~~~~~-~~~~i~~ 95 (117)
T cd03414 46 SLPEALERLRALGARRVVVL--------PYLLFTG--------------------VLM-DRIEEQVAELAAE-PGIEFVL 95 (117)
T ss_pred CHHHHHHHHHHcCCCEEEEE--------echhcCC--------------------chH-HHHHHHHHHHHhC-CCceEEE
Confidence 35677888888899988885 5555431 112 2356667777777 7777766
Q ss_pred Ee
Q 045313 129 VD 130 (234)
Q Consensus 129 ~D 130 (234)
..
T Consensus 96 ~~ 97 (117)
T cd03414 96 AP 97 (117)
T ss_pred CC
Confidence 43
No 55
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=60.44 E-value=33 Score=25.77 Aligned_cols=53 Identities=13% Similarity=0.205 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHhCCceEEEecCCCCCCccchhhhccCCcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHhhcCCceE
Q 045313 47 LEEFETGLRRLYDEGARNFWIHNTGPLGCLAQNVAKFGTDLSMLDELGCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNI 126 (234)
Q Consensus 47 i~~~~~~i~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i 126 (234)
...+.+.+++|.+.|+++|+|. |..+.. | ..| ..|.+.+++++ +|..+|
T Consensus 55 ~p~~~eaL~~l~~~G~~~V~V~--------Pl~l~~-----------G---------~e~-~di~~~v~~~~--~~~~~i 103 (127)
T cd03412 55 VDTPEEALAKLAADGYTEVIVQ--------SLHIIP-----------G---------EEY-EKLKREVDAFK--KGFKKI 103 (127)
T ss_pred CCCHHHHHHHHHHCCCCEEEEE--------eCeeEC-----------c---------HHH-HHHHHHHHHHh--CCCceE
Confidence 4567889999999999999997 433332 1 223 56677777776 566677
Q ss_pred EEEe
Q 045313 127 TYVD 130 (234)
Q Consensus 127 ~~~D 130 (234)
.+..
T Consensus 104 ~~g~ 107 (127)
T cd03412 104 KLGR 107 (127)
T ss_pred EEcc
Confidence 6654
No 56
>PF06908 DUF1273: Protein of unknown function (DUF1273); InterPro: IPR024718 This entry represents a functionally uncharacterised domain.; PDB: 2NX2_A.
Probab=59.94 E-value=27 Score=28.07 Aligned_cols=57 Identities=23% Similarity=0.380 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHHhCCceEEEecCCCCCCccchhhhccCCcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 045313 43 IPKILEEFETGLRRLYDEGARNFWIHNTGPLGCLAQNVAKFGTDLSMLDELGCVSGHNQAAKLFNLQLHALCKKLQGDYT 122 (234)
Q Consensus 43 v~~~i~~~~~~i~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~ 122 (234)
+..+-..+.+.|.+|++.|.+.|+.-+ .+| +-..-.+.+.+|++++|
T Consensus 24 ~~~ik~~L~~~i~~lie~G~~~fi~Gg--alG-------------------------------~D~waae~vl~LK~~yp 70 (177)
T PF06908_consen 24 IQVIKKALKKQIIELIEEGVRWFITGG--ALG-------------------------------VDLWAAEVVLELKKEYP 70 (177)
T ss_dssp HHHHHHHHHHHHHHHHTTT--EEEE-----TT-------------------------------HHHHHHHHHHTTTTT-T
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEECC--ccc-------------------------------HHHHHHHHHHHHHhhhh
Confidence 456777889999999999999887643 122 23334555667777777
Q ss_pred CceEEEEech
Q 045313 123 DSNITYVDIY 132 (234)
Q Consensus 123 ~~~i~~~D~~ 132 (234)
+.++..+=.|
T Consensus 71 ~ikL~~v~Pf 80 (177)
T PF06908_consen 71 EIKLALVLPF 80 (177)
T ss_dssp T-EEEEEESS
T ss_pred heEEEEEEcc
Confidence 7777665443
No 57
>COG0113 HemB Delta-aminolevulinic acid dehydratase [Coenzyme metabolism]
Probab=59.60 E-value=25 Score=30.86 Aligned_cols=66 Identities=9% Similarity=0.101 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHHhCCceEEEecCCCCCCccchhhhccCCcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 045313 45 KILEEFETGLRRLYDEGARNFWIHNTGPLGCLAQNVAKFGTDLSMLDELGCVSGHNQAAKLFNLQLHALCKKLQGDYTDS 124 (234)
Q Consensus 45 ~~i~~~~~~i~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~ 124 (234)
..++.+.+.++++.++|.+-|+++++|+.+ .....+ +..| .-|..++..++.+++.+|+.
T Consensus 58 ~s~d~l~~~~~~~~~lGi~av~LFgvp~~~----~Kd~~g--s~A~--------------~~~givqravr~ik~~~p~l 117 (330)
T COG0113 58 YSLDRLVEEAEELVDLGIPAVILFGVPDDS----KKDETG--SEAY--------------DPDGIVQRAVRAIKEAFPEL 117 (330)
T ss_pred ccHHHHHHHHHHHHhcCCCEEEEeCCCccc----ccCccc--cccc--------------CCCChHHHHHHHHHHhCCCe
Confidence 457888899999999999999999998632 111111 1111 12345677788888888854
Q ss_pred eEEEEec
Q 045313 125 NITYVDI 131 (234)
Q Consensus 125 ~i~~~D~ 131 (234)
+++.|+
T Consensus 118 -~iitDv 123 (330)
T COG0113 118 -VVITDV 123 (330)
T ss_pred -EEEeee
Confidence 344454
No 58
>PRK13660 hypothetical protein; Provisional
Probab=58.37 E-value=61 Score=26.23 Aligned_cols=60 Identities=22% Similarity=0.320 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHHHHhCCceEEEecCCCCCCccchhhhccCCcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 045313 43 IPKILEEFETGLRRLYDEGARNFWIHNTGPLGCLAQNVAKFGTDLSMLDELGCVSGHNQAAKLFNLQLHALCKKLQGDYT 122 (234)
Q Consensus 43 v~~~i~~~~~~i~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~ 122 (234)
+..+-..+.+.|.++++.|.+.|++-+ .+| +-..-.+.+.+|++++|
T Consensus 24 ~~~IK~aL~~~l~~~~e~G~~wfi~gg--alG-------------------------------~d~wAaEvvl~LK~~yp 70 (182)
T PRK13660 24 IKYIKKAIKRKLIALLEEGLEWVIISG--QLG-------------------------------VELWAAEVVLELKEEYP 70 (182)
T ss_pred hHHHHHHHHHHHHHHHHCCCCEEEECC--cch-------------------------------HHHHHHHHHHHHHhhCC
Confidence 345566788999999999999887754 111 33344566777888888
Q ss_pred CceEEEEechhHH
Q 045313 123 DSNITYVDIYTIK 135 (234)
Q Consensus 123 ~~~i~~~D~~~~~ 135 (234)
+.++..+=.+.=.
T Consensus 71 ~lkL~~~~PF~~q 83 (182)
T PRK13660 71 DLKLAVITPFEEH 83 (182)
T ss_pred CeEEEEEeCccch
Confidence 8888777655433
No 59
>KOG2794 consensus Delta-aminolevulinic acid dehydratase [Coenzyme transport and metabolism]
Probab=56.65 E-value=19 Score=31.09 Aligned_cols=66 Identities=17% Similarity=0.139 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHHHhCCceEEEecCCCCCCccchhhhccCCcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 045313 45 KILEEFETGLRRLYDEGARNFWIHNTGPLGCLAQNVAKFGTDLSMLDELGCVSGHNQAAKLFNLQLHALCKKLQGDYTDS 124 (234)
Q Consensus 45 ~~i~~~~~~i~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~ 124 (234)
.-++.+.+.+..|.+.|.|.++++++|+-+ .....+ ..+..=|.-.-..+..|+..+|+.
T Consensus 66 ~G~~rL~e~l~plv~~Gl~sViLfgvv~~~----~Kd~~g----------------s~Ads~~gpvi~ai~~lr~~fPdL 125 (340)
T KOG2794|consen 66 LGVNRLKEELAPLVAKGLRSVILFGVVPEA----LKDPTG----------------SEADSDNGPVIRAIRLLRDRFPDL 125 (340)
T ss_pred HHHHHHHHHHHHHHHhccceEEEecCCCcc----ccCccc----------------ccccCCCCcHHHHHHHHHHhCcce
Confidence 346778999999999999999999987422 111111 001112334456677888889988
Q ss_pred eEEEEec
Q 045313 125 NITYVDI 131 (234)
Q Consensus 125 ~i~~~D~ 131 (234)
- ++.|+
T Consensus 126 ~-i~cDV 131 (340)
T KOG2794|consen 126 V-IACDV 131 (340)
T ss_pred E-EEeee
Confidence 4 45555
No 60
>PF08029 HisG_C: HisG, C-terminal domain; InterPro: IPR013115 ATP phosphoribosyltransferase (2.4.2.17 from EC) is the enzyme that catalyzes the first step in the biosynthesis of histidine in bacteria, fungi and plants as shown below. It is a member of the larger phosphoribosyltransferase superfamily of enzymes which catalyse the condensation of 5-phospho-alpha-D-ribose 1-diphosphate with nitrogenous bases in the presence of divalent metal ions []. ATP + 5-phospho-alpha-D-ribose 1-diphosphate = 1-(5-phospho-D-ribosyl)-ATP + diphosphate Histidine biosynthesis is an energetically expensive process and ATP phosphoribosyltransferase activity is subject to control at several levels. Transcriptional regulation is based primarily on nutrient conditions and determines the amount of enzyme present in the cell, while feedback inihibition rapidly modulates activity in response to cellular conditions. The enzyme has been shown to be inhibited by 1-(5-phospho-D-ribosyl)-ATP, histidine, ppGpp (a signal associated with adverse environmental conditions) and ADP and AMP (which reflect the overall energy status of the cell). As this pathway of histidine biosynthesis is present only in prokayrotes, plants and fungi, this enzyme is a promising target for the development of novel antimicrobial compounds and herbicides. This entry represents the C-terminal portion of ATP phosphoribosyltransferase. The enzyme itself exists in equilibrium between an active dimeric form, an inactive hexameric form and higher aggregates [, ]. Interconversion between the various forms is largely reversible and is influenced by the binding of the natural substrates and inhibitors of the enzyme. This domain is not directly involved in catalysis but appears to be responsible for the formation of hexamers induced by the binding of inhibitors to the enzyme, thus regulating activity.; GO: 0000287 magnesium ion binding, 0003879 ATP phosphoribosyltransferase activity, 0000105 histidine biosynthetic process, 0005737 cytoplasm; PDB: 1Q1K_A 1H3D_A 2VD3_B 1NH7_A 1NH8_A.
Probab=55.22 E-value=12 Score=25.68 Aligned_cols=21 Identities=14% Similarity=0.148 Sum_probs=16.2
Q ss_pred HHHHHHHHHHhCCceEEEecC
Q 045313 50 FETGLRRLYDEGARNFWIHNT 70 (234)
Q Consensus 50 ~~~~i~~L~~~Gar~~vv~~l 70 (234)
+.+.+.+|.+.||+-|+|+.+
T Consensus 52 ~~~~~~~Lk~~GA~~Ilv~pi 72 (75)
T PF08029_consen 52 VWDLMDKLKAAGASDILVLPI 72 (75)
T ss_dssp HHHHHHHHHCTT-EEEEEEE-
T ss_pred HHHHHHHHHHcCCCEEEEEec
Confidence 456778999999999999864
No 61
>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p
Probab=51.21 E-value=95 Score=25.56 Aligned_cols=110 Identities=19% Similarity=0.198 Sum_probs=58.5
Q ss_pred CceeEEEEechhhhhHhhc--C---CChhhHHhhHHHHHHHHHHHHHHHHHhCC--ceEEEecCCCCCCccchhhhccCC
Q 045313 14 SKGLYTFDIGQNDLAGAFY--S---KTIDQVLASIPKILEEFETGLRRLYDEGA--RNFWIHNTGPLGCLAQNVAKFGTD 86 (234)
Q Consensus 14 ~~sL~~i~iG~ND~~~~~~--~---~~~~~~~~~v~~~i~~~~~~i~~L~~~Ga--r~~vv~~lpplg~~P~~~~~~~~~ 86 (234)
..+++++..|.-+.....+ . ... .........+..+...+.++..... .++++.+++|... ....
T Consensus 100 ~pdvvV~nsG~W~~~~~~~~~~~~~~~~-~~~~~y~~~l~~~~~~~~~~~~~~~~~~~v~~r~~~P~h~-----~~~~-- 171 (263)
T PF13839_consen 100 RPDVVVINSGLWYLRRSGFIEWGDNKEI-NPLEAYRNRLRTLADWVRRLLDRSKPPTRVFWRTTSPVHF-----EGGD-- 171 (263)
T ss_pred CCCEEEEEcchhhhhcchhcccCCCcCc-chHHHHHHHHHHHHHHHHhhhccccccceEEEEecCCccc-----cccc--
Confidence 6788888999988754221 0 111 1122234456666667776665554 6677776655321 1110
Q ss_pred cCCCCCCCcc-----HHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHHHHHH
Q 045313 87 LSMLDELGCV-----SGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIKYSLI 139 (234)
Q Consensus 87 ~~~~d~~~c~-----~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~ 139 (234)
...++.|. ...+.....+|..+...+ ..+.++.+.|++..+....
T Consensus 172 --~~~gg~c~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ldi~~~~~~~r 221 (263)
T PF13839_consen 172 --WNSGGSCNPPRREEITNEQIDELNEALREAL------KKNSRVHLLDIFTMLSSFR 221 (263)
T ss_pred --cccCCCcCcccccCCCHHHHHHHHHHHHHHh------hcCCCceeeeecchhhhcc
Confidence 00112343 122445566665555544 1367888999966555544
No 62
>COG3581 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=50.95 E-value=29 Score=31.53 Aligned_cols=47 Identities=28% Similarity=0.508 Sum_probs=30.2
Q ss_pred HHHHhCCceEEEecCCCCCCccchhhhccCCcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEech
Q 045313 56 RLYDEGARNFWIHNTGPLGCLAQNVAKFGTDLSMLDELGCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIY 132 (234)
Q Consensus 56 ~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~ 132 (234)
.+++.|+.+++ -+.|.||.|.-... ..++.+|++++|+++++-+|.-
T Consensus 327 e~i~~g~~nvI--clqPFGCmPnhI~~----------------------------kgm~k~lk~~~p~ani~aVd~d 373 (420)
T COG3581 327 ELIESGVDNVI--CLQPFGCMPNHIVS----------------------------KGMIKGLKRDKPKANIAAVDYD 373 (420)
T ss_pred HHHHcCCCceE--EecCccCCcHHHHH----------------------------HHHHHHHHhcCCCCceEEeecC
Confidence 35566777665 45699999954432 3345666677777777766653
No 63
>TIGR03455 HisG_C-term ATP phosphoribosyltransferase, C-terminal domain. This domain corresponds to the C-terminal third of the HisG protein. It is absent in many lineages.
Probab=50.88 E-value=21 Score=25.92 Aligned_cols=23 Identities=17% Similarity=0.270 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHhCCceEEEecC
Q 045313 48 EEFETGLRRLYDEGARNFWIHNT 70 (234)
Q Consensus 48 ~~~~~~i~~L~~~Gar~~vv~~l 70 (234)
+.+.+.+.+|.++||+.|+|+.+
T Consensus 74 ~~v~~~~~~Lk~~GA~~Ilv~~i 96 (100)
T TIGR03455 74 KVVNELIDKLKAAGARDILVLPI 96 (100)
T ss_pred HHHHHHHHHHHHcCCCeEEEech
Confidence 45778889999999999999753
No 64
>TIGR01417 PTS_I_fam phosphoenolpyruvate-protein phosphotransferase. This model recognizes a distinct clade of phophoenolpyruvate (PEP)-dependent enzymes. Most members are known or deduced to function as the phosphoenolpyruvate-protein phosphotransferase (or enzyme I) of PTS sugar transport systems. However, some species with both a member of this family and a homolog of the phosphocarrier protein HPr lack a IIC component able to serve as a permease. An HPr homolog designated NPr has been implicated in the regulation of nitrogen assimilation, which demonstrates that not all phosphotransferase system components are associated directly with PTS transport.
Probab=45.72 E-value=64 Score=30.88 Aligned_cols=15 Identities=40% Similarity=0.534 Sum_probs=12.3
Q ss_pred eeEEEEechhhhhHh
Q 045313 16 GLYTFDIGQNDLAGA 30 (234)
Q Consensus 16 sL~~i~iG~ND~~~~ 30 (234)
-+=+++||.||+..+
T Consensus 444 ~vDf~sIGtnDLsqy 458 (565)
T TIGR01417 444 EVDFFSIGTNDLTQY 458 (565)
T ss_pred hCCEEEEChhHHHHH
Confidence 455789999999875
No 65
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=44.86 E-value=52 Score=24.99 Aligned_cols=26 Identities=19% Similarity=0.115 Sum_probs=22.8
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhc
Q 045313 96 VSGHNQAAKLFNLQLHALCKKLQGDY 121 (234)
Q Consensus 96 ~~~~~~~~~~~N~~L~~~l~~l~~~~ 121 (234)
.+..+.++..||+.|...|.++++++
T Consensus 70 e~q~e~lt~rF~~aL~~~L~~yq~~H 95 (128)
T PRK13717 70 EAQSKALSARFNTALEASLQAWQQKH 95 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 35678899999999999999999875
No 66
>cd00419 Ferrochelatase_C Ferrochelatase, C-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=44.61 E-value=85 Score=23.87 Aligned_cols=19 Identities=26% Similarity=0.413 Sum_probs=15.9
Q ss_pred HHHHHHHHHHhCCceEEEe
Q 045313 50 FETGLRRLYDEGARNFWIH 68 (234)
Q Consensus 50 ~~~~i~~L~~~Gar~~vv~ 68 (234)
+.+.|++|.+.|+++|+|+
T Consensus 79 ~~~~l~~l~~~G~~~i~v~ 97 (135)
T cd00419 79 TDDALEELAKEGVKNVVVV 97 (135)
T ss_pred HHHHHHHHHHcCCCeEEEE
Confidence 4567788999999999987
No 67
>COG4474 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=43.27 E-value=1.7e+02 Score=23.45 Aligned_cols=58 Identities=21% Similarity=0.383 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHHHHhCCceEEEecCCCCCCccchhhhccCCcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 045313 43 IPKILEEFETGLRRLYDEGARNFWIHNTGPLGCLAQNVAKFGTDLSMLDELGCVSGHNQAAKLFNLQLHALCKKLQGDYT 122 (234)
Q Consensus 43 v~~~i~~~~~~i~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~ 122 (234)
+..+-+.|...|..|+..|.+-+++.| .+| +-.+-...+..|+++||
T Consensus 24 ~~~IKkai~~~l~~lleeGleW~litG--qLG-------------------------------~E~WA~Evv~eLk~eyp 70 (180)
T COG4474 24 VSYIKKAIKKKLEALLEEGLEWVLITG--QLG-------------------------------FELWAAEVVIELKEEYP 70 (180)
T ss_pred HHHHHHHHHHHHHHHHhcCceEEEEec--ccc-------------------------------HHHHHHHHHHHHHhhCC
Confidence 345677889999999999999999987 333 22233455677888898
Q ss_pred CceEEEEechh
Q 045313 123 DSNITYVDIYT 133 (234)
Q Consensus 123 ~~~i~~~D~~~ 133 (234)
+.++.++-.+.
T Consensus 71 ~ik~avitpFe 81 (180)
T COG4474 71 HIKLAVITPFE 81 (180)
T ss_pred CeeEEEEechh
Confidence 88887776543
No 68
>PF02896 PEP-utilizers_C: PEP-utilising enzyme, TIM barrel domain; InterPro: IPR000121 A number of enzymes that catalyze the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) via a phospho-histidine intermediate have been shown to be structurally related [, , , ]. All these enzymes share the same catalytic mechanism: they bind PEP and transfer the phosphoryl group from it to a histidine residue. The sequence around that residue is highly conserved. This domain is often found associated with the pyruvate phosphate dikinase, PEP/pyruvate-binding domain (IPR002192 from INTERPRO) at its N terminus and the PEP-utilizing enzyme mobile domain.; GO: 0016772 transferase activity, transferring phosphorus-containing groups, 0016310 phosphorylation; PDB: 2HRO_A 2OLS_A 2DIK_A 2R82_A 1JDE_A 1DIK_A 1GGO_A 1KBL_A 1KC7_A 2BG5_B ....
Probab=41.70 E-value=44 Score=29.18 Aligned_cols=15 Identities=40% Similarity=0.503 Sum_probs=12.4
Q ss_pred eEEEEechhhhhHhh
Q 045313 17 LYTFDIGQNDLAGAF 31 (234)
Q Consensus 17 L~~i~iG~ND~~~~~ 31 (234)
+=+++||+||+..+.
T Consensus 198 ~DF~SIGtNDLtQy~ 212 (293)
T PF02896_consen 198 VDFFSIGTNDLTQYT 212 (293)
T ss_dssp SSEEEEEHHHHHHHH
T ss_pred CCEEEEChhHHHHHH
Confidence 457899999998865
No 69
>PF04914 DltD_C: DltD C-terminal region; InterPro: IPR006998 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine. These esters play an important role in controlling the net anionic charge of the poly (GroP) moiety of LTA. DltA and DltC encode the D-alanine-D-alanyl carrier protein ligase (Dcl) and D-alanyl carrier protein (Dcp), respectively. Whereas the functions of DltA and DltC are defined, the functions of DltB and DltD are unknown. In vitro assays showed that DltD bound Dcp for ligation with D-alanine by Dcl in the presence of ATP. In contrast, the homologue of Dcp, the Escherichia coli acyl carrier protein (ACP), involved in fatty acid biosynthesis, was not bound to DltD and thus was not ligated with D-alanine. DltD also catalyzed the hydrolysis of the mischarged D-alanyl-ACP. The hydrophobic N-terminal sequence of DltD was required for anchoring the protein in the membrane. It is hypothesized that this membrane-associated DltD facilitates the binding of Dcp and Dcl for ligation of Dcp with D-alanine and that the resulting D-alanyl-Dcp is translocated to the primary site of D-alanylation []. These sequences contain the C-terminal region of DltD.; PDB: 3BMA_C.
Probab=40.65 E-value=24 Score=26.89 Aligned_cols=24 Identities=29% Similarity=0.295 Sum_probs=19.3
Q ss_pred CCceeccCCChhHHHHHHHHHHHh
Q 045313 190 TEYVNWDGIHYTEAANQYVSTQIL 213 (234)
Q Consensus 190 ~~ylfwD~~HPT~~~h~~iA~~~~ 213 (234)
+.|++-|.+||..+|+-.+-+.|.
T Consensus 101 ~~yfm~D~iHlgw~GWv~vd~~i~ 124 (130)
T PF04914_consen 101 EPYFMQDTIHLGWKGWVYVDQAIY 124 (130)
T ss_dssp STTSBSSSSSB-THHHHHHHHHHH
T ss_pred CCceeeecccCchhhHHHHHHHHH
Confidence 457889999999999988877764
No 70
>TIGR02744 TrbI_Ftype type-F conjugative transfer system protein TrbI. This protein is an essential component of the F-type conjugative transfer sytem for plasmid DNA transfer and has been shown to be localized to the periplasm.
Probab=37.17 E-value=82 Score=23.44 Aligned_cols=26 Identities=19% Similarity=0.093 Sum_probs=22.8
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhc
Q 045313 96 VSGHNQAAKLFNLQLHALCKKLQGDY 121 (234)
Q Consensus 96 ~~~~~~~~~~~N~~L~~~l~~l~~~~ 121 (234)
.+..+.++..||+.|...|.+++++|
T Consensus 57 e~q~~~~~~rF~~~L~~~L~~yq~~H 82 (112)
T TIGR02744 57 EAQQKALLGRFNALLEAELQAWQAQH 82 (112)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 34678899999999999999999886
No 71
>PRK11177 phosphoenolpyruvate-protein phosphotransferase; Provisional
Probab=36.98 E-value=97 Score=29.77 Aligned_cols=16 Identities=38% Similarity=0.455 Sum_probs=12.8
Q ss_pred eeEEEEechhhhhHhh
Q 045313 16 GLYTFDIGQNDLAGAF 31 (234)
Q Consensus 16 sL~~i~iG~ND~~~~~ 31 (234)
-+=+++||.||+..+.
T Consensus 445 ~vDf~sIGtnDL~qy~ 460 (575)
T PRK11177 445 EVDFFSIGTNDLTQYT 460 (575)
T ss_pred hCCEEEECcHHHHHHH
Confidence 4557899999998854
No 72
>COG3605 PtsP Signal transduction protein containing GAF and PtsI domains [Signal transduction mechanisms]
Probab=36.11 E-value=28 Score=33.47 Aligned_cols=19 Identities=26% Similarity=0.427 Sum_probs=14.6
Q ss_pred cCceeEEEEechhhhhHhh
Q 045313 13 FSKGLYTFDIGQNDLAGAF 31 (234)
Q Consensus 13 ~~~sL~~i~iG~ND~~~~~ 31 (234)
+.+.+=+|++|+||+..+.
T Consensus 616 L~~~vDFvSVGtNDL~Qyl 634 (756)
T COG3605 616 LAKRVDFVSVGTNDLTQYL 634 (756)
T ss_pred HHhhCCEEEecchHHHHHH
Confidence 3445668999999998865
No 73
>TIGR01091 upp uracil phosphoribosyltransferase. that includes uracil phosphoribosyltransferase, uridine kinases, and other, uncharacterized proteins.
Probab=35.58 E-value=1.2e+02 Score=24.81 Aligned_cols=50 Identities=16% Similarity=0.106 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHhCCceEEEecCCCCCCccchhhhccCCcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHhhcCCceE
Q 045313 47 LEEFETGLRRLYDEGARNFWIHNTGPLGCLAQNVAKFGTDLSMLDELGCVSGHNQAAKLFNLQLHALCKKLQGDYTDSNI 126 (234)
Q Consensus 47 i~~~~~~i~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i 126 (234)
-..+...++.|.+.|+++|.+..+ + .. ...++.+.+++|+++|
T Consensus 135 G~Tl~~ai~~L~~~G~~~I~v~~l--l-------~~----------------------------~~gl~~l~~~~p~v~i 177 (207)
T TIGR01091 135 GGTMIAALDLLKKRGAKKIKVLSI--V-------AA----------------------------PEGIEAVEKAHPDVDI 177 (207)
T ss_pred hHHHHHHHHHHHHcCCCEEEEEEE--e-------cC----------------------------HHHHHHHHHHCCCCEE
Confidence 456778899999999999888765 1 00 2234556668999999
Q ss_pred EEEechh
Q 045313 127 TYVDIYT 133 (234)
Q Consensus 127 ~~~D~~~ 133 (234)
+..-+-.
T Consensus 178 ~~~~id~ 184 (207)
T TIGR01091 178 YTAAIDE 184 (207)
T ss_pred EEEEECC
Confidence 8876644
No 74
>PF09907 DUF2136: Uncharacterized protein conserved in bacteria (DUF2136); InterPro: IPR018669 HigB (YgjN) is the toxin of the HigB-HigA toxin-antitoxin system, acting as a translation-dependent mRNA interferase. HigB inhibits protein synthesis by cleaving translated mRNAs within the coding region []. ; GO: 0016788 hydrolase activity, acting on ester bonds
Probab=35.40 E-value=16 Score=25.10 Aligned_cols=27 Identities=22% Similarity=0.365 Sum_probs=21.0
Q ss_pred ccCCccccccCceeEEEEechhhhhHh
Q 045313 4 DKYIPAVDYFSKGLYTFDIGQNDLAGA 30 (234)
Q Consensus 4 ~~~~~~~~~~~~sL~~i~iG~ND~~~~ 30 (234)
.+..|+.+.+.+..+++.||||.|-..
T Consensus 25 k~~f~~ad~v~~~~~vFnI~GN~yRlI 51 (76)
T PF09907_consen 25 KQQFPSADIVKNNRVVFNIGGNKYRLI 51 (76)
T ss_pred HHHCcchhhhcCCEEEEEcCCCcEEEE
Confidence 344577777888899999999998643
No 75
>PF06812 ImpA-rel_N: ImpA-related N-terminal; InterPro: IPR010657 This entry represents a conserved region located towards the N-terminal end of ImpA and related proteins. ImpA is an inner membrane protein, which has been suggested to be involved with proteins that are exported and associated with colony variations in Actinobacillus actinomycetemcomitans []. Note that many members are hypothetical proteins.
Probab=33.58 E-value=17 Score=23.73 Aligned_cols=8 Identities=38% Similarity=0.983 Sum_probs=6.9
Q ss_pred eccCCChh
Q 045313 194 NWDGIHYT 201 (234)
Q Consensus 194 fwD~~HPT 201 (234)
|||.+||.
T Consensus 53 ~W~~l~P~ 60 (62)
T PF06812_consen 53 YWDSLHPQ 60 (62)
T ss_pred CCcccCCC
Confidence 69999996
No 76
>cd03411 Ferrochelatase_N Ferrochelatase, N-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=32.43 E-value=54 Score=25.55 Aligned_cols=23 Identities=22% Similarity=0.317 Sum_probs=19.7
Q ss_pred HHHHHHHHHHhCCceEEEecCCC
Q 045313 50 FETGLRRLYDEGARNFWIHNTGP 72 (234)
Q Consensus 50 ~~~~i~~L~~~Gar~~vv~~lpp 72 (234)
+.+.|++|.+.|+++++|+-+-|
T Consensus 101 i~~~l~~l~~~g~~~iivlPl~P 123 (159)
T cd03411 101 IEEALEELKADGVDRIVVLPLYP 123 (159)
T ss_pred HHHHHHHHHHcCCCEEEEEECCc
Confidence 56789999999999999987654
No 77
>PF05141 DIT1_PvcA: Pyoverdine/dityrosine biosynthesis protein; InterPro: IPR007817 This entry is found in DIT1, a protein is involved in the synthesis of dityrosine []. Dityrosine is a sporulation-specific component of the Saccharomyces cerevisiae ascospore wall that is essential for the resistance of the spores to adverse environmental conditions. Q9I1L5 from SWISSPROT is involved in the biosynthesis of pyoverdine [].; PDB: 3E59_C.
Probab=32.35 E-value=1.2e+02 Score=26.23 Aligned_cols=69 Identities=14% Similarity=0.232 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHhCCceEEEecCCCCCCccchhhhccCCcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 045313 45 KILEEFETGLRRLYDEGARNFWIHNTGPLGCLAQNVAKFGTDLSMLDELGCVSGHNQAAKLFNLQLHALCKKLQGDYTDS 124 (234)
Q Consensus 45 ~~i~~~~~~i~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~~~~ 124 (234)
.-++++.+.|+++|.-||+-.|+.+ |. .+ +.|...-.+-+..|.+.|++++.++.- .
T Consensus 43 ~~L~~lc~~I~~vY~PGa~v~I~SD----G~------Vf---------~DllgV~D~~v~~Y~~~Lr~l~~~~~~----~ 99 (278)
T PF05141_consen 43 RRLNGLCQAIEAVYPPGAKVTIISD----GH------VF---------NDLLGVPDEEVWAYGEALRELAEEKGL----D 99 (278)
T ss_dssp HHHHHHHHHHHHHSTT-EEEEEE------HH------HH---------GGGTT--HHHHHHHHHHHHHHHHHCT-----T
T ss_pred HHHHHHHHHHHHhCCCCcEEEEEec----Cc------Ee---------ccccCCCHHHHHHHHHHHHHHHHhcCC----C
Confidence 4578889999999999998655543 11 11 135555567899999999999987753 2
Q ss_pred eEEEEechhHHH
Q 045313 125 NITYVDIYTIKY 136 (234)
Q Consensus 125 ~i~~~D~~~~~~ 136 (234)
.|-++++..++.
T Consensus 100 ~I~f~~l~dl~~ 111 (278)
T PF05141_consen 100 HIKFFRLEDLLL 111 (278)
T ss_dssp TEEEE-GGG---
T ss_pred eEEEeCHHHhhc
Confidence 488999888833
No 78
>COG1402 Uncharacterized protein, putative amidase [General function prediction only]
Probab=32.32 E-value=66 Score=27.45 Aligned_cols=25 Identities=24% Similarity=0.300 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHhCCceEEEec
Q 045313 45 KILEEFETGLRRLYDEGARNFWIHN 69 (234)
Q Consensus 45 ~~i~~~~~~i~~L~~~Gar~~vv~~ 69 (234)
..+.-+.+..+.|+..|.|+|+++|
T Consensus 87 t~~~~~~~~~~Sl~~~Gfrk~v~vN 111 (250)
T COG1402 87 TLIALLVELVESLARHGFRKFVIVN 111 (250)
T ss_pred HHHHHHHHHHHHHHhcCccEEEEEe
Confidence 4566667788899999999999998
No 79
>COG1080 PtsA Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]
Probab=31.87 E-value=57 Score=31.20 Aligned_cols=47 Identities=21% Similarity=0.231 Sum_probs=25.9
Q ss_pred ceeEEEEechhhhhHhhc--CCChhh----HHhhHHHHHHHHHHHHHHHHHhC
Q 045313 15 KGLYTFDIGQNDLAGAFY--SKTIDQ----VLASIPKILEEFETGLRRLYDEG 61 (234)
Q Consensus 15 ~sL~~i~iG~ND~~~~~~--~~~~~~----~~~~v~~~i~~~~~~i~~L~~~G 61 (234)
+-+=+++||+||+..+.. .+.... ...+-+.++.-|...|+.-+..|
T Consensus 445 kevDFfSIGTNDLtQYtLA~DR~n~~vs~ly~pl~PAVLrlI~~vi~~ah~~g 497 (574)
T COG1080 445 KEVDFFSIGTNDLTQYTLAVDRGNAKVSHLYDPLHPAVLRLIKQVIDAAHRHG 497 (574)
T ss_pred HhCCEeeecccHHHHHHHHHhcCChhhhhhcCCCCHHHHHHHHHHHHHHHHcC
Confidence 345578999999988642 111111 12233556666666665555554
No 80
>KOG4079 consensus Putative mitochondrial ribosomal protein mRpS25 [Translation, ribosomal structure and biogenesis]
Probab=31.68 E-value=21 Score=27.46 Aligned_cols=17 Identities=29% Similarity=0.478 Sum_probs=14.5
Q ss_pred HhCCceEEEecCCCCCC
Q 045313 59 DEGARNFWIHNTGPLGC 75 (234)
Q Consensus 59 ~~Gar~~vv~~lpplg~ 75 (234)
+.|||+||.+|+|-+..
T Consensus 42 ~~GARdFVfwNipQiQy 58 (169)
T KOG4079|consen 42 QSGARDFVFWNIPQIQY 58 (169)
T ss_pred ccCccceEEecchhhcc
Confidence 67999999999997653
No 81
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases, and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=30.26 E-value=61 Score=23.44 Aligned_cols=19 Identities=16% Similarity=0.305 Sum_probs=16.2
Q ss_pred HHHHHHHHHHhCCceEEEe
Q 045313 50 FETGLRRLYDEGARNFWIH 68 (234)
Q Consensus 50 ~~~~i~~L~~~Gar~~vv~ 68 (234)
+.+.+++|.+.|+++|+|+
T Consensus 44 i~~~l~~l~~~G~~~i~lv 62 (103)
T cd03413 44 LDDVLAKLKKAGIKKVTLM 62 (103)
T ss_pred HHHHHHHHHHcCCCEEEEE
Confidence 5677888999999999886
No 82
>TIGR01828 pyru_phos_dikin pyruvate, phosphate dikinase. This model represents pyruvate,phosphate dikinase, also called pyruvate,orthophosphate dikinase. It is similar in sequence to other PEP-utilizing enzymes.
Probab=29.57 E-value=79 Score=31.97 Aligned_cols=16 Identities=31% Similarity=0.484 Sum_probs=13.0
Q ss_pred eEEEEechhhhhHhhc
Q 045313 17 LYTFDIGQNDLAGAFY 32 (234)
Q Consensus 17 L~~i~iG~ND~~~~~~ 32 (234)
.=++|||+||+..+.+
T Consensus 755 ~DFfSiGTNDLtQ~tl 770 (856)
T TIGR01828 755 ADFFSFGTNDLTQMTF 770 (856)
T ss_pred CCEEEECccHHHHHHh
Confidence 4578999999988764
No 83
>PRK10128 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional
Probab=28.81 E-value=2.2e+02 Score=24.50 Aligned_cols=43 Identities=26% Similarity=0.453 Sum_probs=25.6
Q ss_pred ceeEEEEechhhhhHhhc-CCChhhHHhhHHHHHHHHHHHHHHHHHhCC
Q 045313 15 KGLYTFDIGQNDLAGAFY-SKTIDQVLASIPKILEEFETGLRRLYDEGA 62 (234)
Q Consensus 15 ~sL~~i~iG~ND~~~~~~-~~~~~~~~~~v~~~i~~~~~~i~~L~~~Ga 62 (234)
..+-.|++|.+|+..... ....+. +.+...+...++...++|.
T Consensus 168 ~gvd~i~~G~~Dls~slg~~~~~~~-----pev~~ai~~v~~a~~~~Gk 211 (267)
T PRK10128 168 EGIDGVFIGPADLSASLGYPDNAGH-----PEVQRIIETSIRRIRAAGK 211 (267)
T ss_pred CCCCEEEECHHHHHHHcCCCCCCCC-----HHHHHHHHHHHHHHHHcCC
Confidence 357788999999988752 111111 2344455555666667775
No 84
>cd03415 CbiX_CbiC Archaeal sirohydrochlorin cobalt chelatase (CbiX) single domain. Proteins in this subgroup contain a single CbiX domain N-terminal to a precorrin-8X methylmutase (CbiC) domain. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, while CbiC catalyzes the conversion of cobalt-precorrin 8 to cobyrinic acid by methyl rearrangement. Both CbiX and CbiC are involved in vitamin B12 biosynthesis.
Probab=28.49 E-value=65 Score=24.29 Aligned_cols=20 Identities=25% Similarity=0.340 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHhCCceEEEe
Q 045313 49 EFETGLRRLYDEGARNFWIH 68 (234)
Q Consensus 49 ~~~~~i~~L~~~Gar~~vv~ 68 (234)
.+.+.|++|.+.|+++|+|+
T Consensus 45 ~l~~~l~~l~~~G~~~ivVv 64 (125)
T cd03415 45 NWRDLLNELLSEGYGHIIIA 64 (125)
T ss_pred CHHHHHHHHHHCCCCEEEEe
Confidence 36788899999999999997
No 85
>COG0276 HemH Protoheme ferro-lyase (ferrochelatase) [Coenzyme metabolism]
Probab=28.26 E-value=2e+02 Score=25.54 Aligned_cols=91 Identities=11% Similarity=0.044 Sum_probs=45.5
Q ss_pred HHHHHHHHHHhCCceEEEecCCCC-CCccchhhhc---cCCcCCCCCCCccHHHHH--HHHHHHHHHHHHHHHHHhhcC-
Q 045313 50 FETGLRRLYDEGARNFWIHNTGPL-GCLAQNVAKF---GTDLSMLDELGCVSGHNQ--AAKLFNLQLHALCKKLQGDYT- 122 (234)
Q Consensus 50 ~~~~i~~L~~~Gar~~vv~~lppl-g~~P~~~~~~---~~~~~~~d~~~c~~~~~~--~~~~~N~~L~~~l~~l~~~~~- 122 (234)
+.+.|++|.+.|.+++|++-+-|- +++-...... .+-. ..+..--...+.. .-..|...+.+.+++--++++
T Consensus 104 i~~~v~~l~~~gv~~iv~~pLyPqyS~sTt~s~~~~~~~al~-~~~~~~~i~~I~~~~~~p~yI~a~a~~I~~~~~~~~~ 182 (320)
T COG0276 104 IEEAVEELKKDGVERIVVLPLYPQYSSSTTGSYVDELARALK-ELRGQPKISTIPDYYDEPLYIEALADSIREKLAKHPR 182 (320)
T ss_pred HHHHHHHHHHcCCCeEEEEECCcccccccHHHHHHHHHHHHH-hcCCCCceEEecCccCChHHHHHHHHHHHHHHHhcCC
Confidence 356788999999999999876552 2211000000 0000 0000000000000 013456666666655444554
Q ss_pred CceEEEEechhHHHHHHHc
Q 045313 123 DSNITYVDIYTIKYSLIAN 141 (234)
Q Consensus 123 ~~~i~~~D~~~~~~~i~~n 141 (234)
+-..++|..|++=...++.
T Consensus 183 ~~~~llfSaHglP~~~~~~ 201 (320)
T COG0276 183 DDDVLLFSAHGLPKRYIDE 201 (320)
T ss_pred CCeEEEEecCCCchhhhhc
Confidence 4567788888887777665
No 86
>COG3836 HpcH 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [Carbohydrate transport and metabolism]
Probab=27.00 E-value=2.4e+02 Score=24.00 Aligned_cols=35 Identities=26% Similarity=0.290 Sum_probs=20.4
Q ss_pred eEEEEechhhhhHhhc---CCChhhHHhhHHHHHHHHH
Q 045313 17 LYTFDIGQNDLAGAFY---SKTIDQVLASIPKILEEFE 51 (234)
Q Consensus 17 L~~i~iG~ND~~~~~~---~~~~~~~~~~v~~~i~~~~ 51 (234)
+=.|+||.-|+....- +....++.+.|+.++..+.
T Consensus 169 VDgvFiGPaDLaas~G~~gn~~hpeV~~aI~~~~~~i~ 206 (255)
T COG3836 169 VDGVFIGPADLAASLGHLGNPGHPEVQAAIEHIIARIR 206 (255)
T ss_pred CCeEEECHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHH
Confidence 4457899999877651 3333455555555554443
No 87
>PRK00129 upp uracil phosphoribosyltransferase; Reviewed
Probab=26.95 E-value=2e+02 Score=23.45 Aligned_cols=24 Identities=17% Similarity=0.076 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHhCCceEEEecC
Q 045313 47 LEEFETGLRRLYDEGARNFWIHNT 70 (234)
Q Consensus 47 i~~~~~~i~~L~~~Gar~~vv~~l 70 (234)
-..+...++.|.+.|++++.+..+
T Consensus 137 G~Tl~~ai~~L~~~G~~~I~~~~l 160 (209)
T PRK00129 137 GGSAIAAIDLLKKRGAKNIKVLCL 160 (209)
T ss_pred hHHHHHHHHHHHHcCCCEEEEEEE
Confidence 456778889999999999988765
No 88
>PF08331 DUF1730: Domain of unknown function (DUF1730); InterPro: IPR013542 This domain of unknown function occurs in iron-sulphur cluster-binding proteins together with the 4Fe-4S binding domain (IPR001450 from INTERPRO).
Probab=25.96 E-value=1.7e+02 Score=19.78 Aligned_cols=60 Identities=13% Similarity=-0.004 Sum_probs=29.4
Q ss_pred hCCceEEEecCCCCCCccchhhhccCCcCCCCCCCccHHHHHH---HHHHHHHHHHHHHHHHhhcCCce
Q 045313 60 EGARNFWIHNTGPLGCLAQNVAKFGTDLSMLDELGCVSGHNQA---AKLFNLQLHALCKKLQGDYTDSN 125 (234)
Q Consensus 60 ~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~---~~~~N~~L~~~l~~l~~~~~~~~ 125 (234)
-|||.||++.+|=..-.|...... -...+..+.+.-- -...-.+|+++++.|+++.|+.+
T Consensus 9 p~arSvIv~a~~Y~~~~~~~~~~~------~~~~g~iarYA~G~DYH~vlk~~L~~l~~~i~~~~~~~~ 71 (78)
T PF08331_consen 9 PGARSVIVLAFPYYPEPPPPPPPP------GPGRGRIARYAWGRDYHKVLKKKLEQLAEWIRELGPDFE 71 (78)
T ss_pred CCCcEEEEEEccCCCccccccccC------CCCCeeEeehhccCChHHHHHHHHHHHHHHHHHHCCCCC
Confidence 589999999876322000000000 0112333333322 22233566666677777777753
No 89
>PRK11061 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain; Provisional
Probab=25.60 E-value=84 Score=31.20 Aligned_cols=15 Identities=27% Similarity=0.443 Sum_probs=12.4
Q ss_pred eEEEEechhhhhHhh
Q 045313 17 LYTFDIGQNDLAGAF 31 (234)
Q Consensus 17 L~~i~iG~ND~~~~~ 31 (234)
+=+++||+||+..+.
T Consensus 612 ~DF~SIGtNDL~Qy~ 626 (748)
T PRK11061 612 VDFISVGTNDLTQYL 626 (748)
T ss_pred CCEEEECccHHHHHH
Confidence 457899999998865
No 90
>TIGR01418 PEP_synth phosphoenolpyruvate synthase. Also called pyruvate,water dikinase and PEP synthase. The member from Methanococcus jannaschii contains a large intein. This enzyme generates phosphoenolpyruvate (PEP) from pyruvate, hydrolyzing ATP to AMP and releasing inorganic phosphate in the process. The enzyme shows extensive homology to other enzymes that use PEP as substrate or product. This enzyme may provide PEP for gluconeogenesis, for PTS-type carbohydrate transport systems, or for other processes.
Probab=24.29 E-value=2.3e+02 Score=28.41 Aligned_cols=47 Identities=23% Similarity=0.365 Sum_probs=26.4
Q ss_pred eEEEEechhhhhHhhcC--CChhhH----HhhHHHHHHHHHHHHHHHHHhCCc
Q 045313 17 LYTFDIGQNDLAGAFYS--KTIDQV----LASIPKILEEFETGLRRLYDEGAR 63 (234)
Q Consensus 17 L~~i~iG~ND~~~~~~~--~~~~~~----~~~v~~~i~~~~~~i~~L~~~Gar 63 (234)
+=+|+||.||+..+... +....+ ...-+.+...|...++.-.+.|..
T Consensus 685 vDfisIGtnDLtq~~lg~dR~n~~~~~~~~~~hPaV~~~i~~vi~~a~~~g~~ 737 (782)
T TIGR01418 685 FDGFSIGSNDLTQLTLGVDRDSGLVAHLFDERNPAVLRLIEMAIKAAKEHGKK 737 (782)
T ss_pred CCEEEECchHHHHHHhCccCCchhhcccCCCCCHHHHHHHHHHHHHHHhcCCe
Confidence 56789999999875421 110000 112245666666666666666653
No 91
>PRK09279 pyruvate phosphate dikinase; Provisional
Probab=24.04 E-value=1.4e+02 Score=30.36 Aligned_cols=17 Identities=29% Similarity=0.491 Sum_probs=13.3
Q ss_pred eEEEEechhhhhHhhcC
Q 045313 17 LYTFDIGQNDLAGAFYS 33 (234)
Q Consensus 17 L~~i~iG~ND~~~~~~~ 33 (234)
.=++|||+||+....+.
T Consensus 761 adFfSiGTNDLTQ~t~g 777 (879)
T PRK09279 761 AEFFSFGTNDLTQTTFG 777 (879)
T ss_pred CCEEEEcccHHHHHHhc
Confidence 45789999999887543
No 92
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=23.48 E-value=1.2e+02 Score=21.06 Aligned_cols=21 Identities=29% Similarity=0.340 Sum_probs=16.9
Q ss_pred HHHHHHHHHHhCCceEEEecC
Q 045313 50 FETGLRRLYDEGARNFWIHNT 70 (234)
Q Consensus 50 ~~~~i~~L~~~Gar~~vv~~l 70 (234)
+.+.++.|.+.|.++++|+-+
T Consensus 47 i~~~l~~l~~~g~~~vvvvPl 67 (101)
T cd03409 47 TEEAIRELAEEGYQRVVIVPL 67 (101)
T ss_pred HHHHHHHHHHcCCCeEEEEeC
Confidence 556788899999999998743
No 93
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=23.34 E-value=2.1e+02 Score=22.59 Aligned_cols=33 Identities=21% Similarity=0.379 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCceEEEEech
Q 045313 100 NQAAKLFNLQLHALCKKLQGDYTDSNITYVDIY 132 (234)
Q Consensus 100 ~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~ 132 (234)
....+.|-+.|+++++.++++.|+.+|+++..+
T Consensus 98 ~~~~~~~~~~l~~~i~~ir~~~p~~~Ivv~~~~ 130 (204)
T cd04506 98 KKAEETYQNNLKKIFKEIRKLNPDAPIFLVGLY 130 (204)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecC
Confidence 345678889999999999999999999888654
No 94
>COG1182 AcpD Acyl carrier protein phosphodiesterase [Lipid metabolism]
Probab=22.63 E-value=1.2e+02 Score=25.04 Aligned_cols=27 Identities=4% Similarity=0.057 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHhhcCCceEEEEechh
Q 045313 107 NLQLHALCKKLQGDYTDSNITYVDIYT 133 (234)
Q Consensus 107 N~~L~~~l~~l~~~~~~~~i~~~D~~~ 133 (234)
++.....++.+++++|+.+|+.-|++.
T Consensus 19 ~~l~~~Fi~~yk~~~P~dev~~~DL~~ 45 (202)
T COG1182 19 RKLADEFIETYKEKHPNDEVIERDLAA 45 (202)
T ss_pred HHHHHHHHHHHHHhCCCCeEEEeeccc
Confidence 455566788999999999999999874
No 95
>COG4531 ZnuA ABC-type Zn2+ transport system, periplasmic component/surface adhesin [Inorganic ion transport and metabolism]
Probab=22.36 E-value=2.5e+02 Score=24.49 Aligned_cols=45 Identities=27% Similarity=0.342 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcC---C-ceEEEEechhHHHHHHHcccCCCcccc
Q 045313 100 NQAAKLFNLQLHALCKKLQGDYT---D-SNITYVDIYTIKYSLIANYSRYGFEQP 150 (234)
Q Consensus 100 ~~~~~~~N~~L~~~l~~l~~~~~---~-~~i~~~D~~~~~~~i~~nP~~yGf~~~ 150 (234)
..-.+.||.+|.+.=+++.+++. + --|++-|.|++|++ .||.+.+
T Consensus 183 ~aNlk~f~~~La~~d~~i~~~L~pvk~Kpf~VFHDAY~YFE~------~ygl~~~ 231 (318)
T COG4531 183 DANLKDFEAQLAALDKKVGEELAPVKGKPFFVFHDAYGYFEN------AYGLKPL 231 (318)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCCCeEEEechHHHHHH------hhCcccc
Confidence 34467888888877777766653 3 24667799999996 5777654
No 96
>PRK06464 phosphoenolpyruvate synthase; Validated
Probab=21.95 E-value=2.7e+02 Score=28.00 Aligned_cols=46 Identities=20% Similarity=0.272 Sum_probs=26.3
Q ss_pred eEEEEechhhhhHhhcC--CChhhH----HhhHHHHHHHHHHHHHHHHHhCC
Q 045313 17 LYTFDIGQNDLAGAFYS--KTIDQV----LASIPKILEEFETGLRRLYDEGA 62 (234)
Q Consensus 17 L~~i~iG~ND~~~~~~~--~~~~~~----~~~v~~~i~~~~~~i~~L~~~Ga 62 (234)
+=+++||.||+..+... +....+ ...-+.+.+.+...++.-.++|.
T Consensus 692 vDfi~IGtnDLtq~~lg~dR~n~~v~~~~~~~hPav~~ai~~vi~aa~~~g~ 743 (795)
T PRK06464 692 FDGFSIGSNDLTQLTLGLDRDSGLVAHLFDERNPAVKKLISMAIKAAKKAGK 743 (795)
T ss_pred CCEEEECchHHHHHHhCcCCCchhhhhccCCCCHHHHHHHHHHHHHHHHcCC
Confidence 55789999999875422 111011 11224566666666666666665
No 97
>TIGR03239 GarL 2-dehydro-3-deoxyglucarate aldolase. In E. coli this enzyme (GarL, ) 2-dehydro-3-deoxyglucarate aldolase acts in the catabolism of several sugars including D-galactarate, D-glucarate and L-idarate. In fact, 5-dehydro-4-deoxy-D-glucarate aldolase is a synonym for this enzyme as it is unclear in the literature whether the enzyme acts on only one of these or, as seems likely, has no preference. (Despite the apparent large difference in substrate stucture indicated by their names, 2-DH-3DO- and 5-DH-4DO-glucarate differ only by the chirality of most central hydroxyl-bearing carbon and is alternately named 2-DH-3DO-galactarate.) The reported product of D-galactarate dehydratase (4.2.1.42) is the 5DH-4DO-glucarate isomer and this enzyme is found proximal to the aldolase in many genomes (GenProp0714) where no epimerase is known. Similarly, the product of D-glucarate dehydratase (4.2.1.40) is again the 5-DH-4DO isomer, so the provenance of the 2-DH-3DO-glucarate isomer for which
Probab=21.69 E-value=3.6e+02 Score=22.77 Aligned_cols=42 Identities=21% Similarity=0.305 Sum_probs=24.1
Q ss_pred eeEEEEechhhhhHhhc-CCChhhHHhhHHHHHHHHHHHHHHHHHhCC
Q 045313 16 GLYTFDIGQNDLAGAFY-SKTIDQVLASIPKILEEFETGLRRLYDEGA 62 (234)
Q Consensus 16 sL~~i~iG~ND~~~~~~-~~~~~~~~~~v~~~i~~~~~~i~~L~~~Ga 62 (234)
.+-.+++|.||+...+. ....+. +.+...+...+....+.|.
T Consensus 162 gvd~l~iG~~DLs~slG~~~~~~~-----~~v~~a~~~v~~aa~a~G~ 204 (249)
T TIGR03239 162 GVDGIFVGPSDLAAALGHLGNPNH-----PDVQKAIRHIFDRAAAHGK 204 (249)
T ss_pred CCCEEEEChHHHHHHcCCCCCCCC-----HHHHHHHHHHHHHHHHcCC
Confidence 46788999999987652 111111 2344445555555556665
No 98
>TIGR02311 HpaI 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents the aldolase which performs the final step unique to the 4-hydroxyphenylacetic acid catabolism pathway in which 2,4-dihydroxyhept-2-ene-1,7-dioic acid is split into pyruvate and succinate-semialdehyde. The gene for enzyme is generally found adjacent to other genes for this pathway organized into an operon.
Probab=21.42 E-value=3.4e+02 Score=22.86 Aligned_cols=16 Identities=38% Similarity=0.511 Sum_probs=13.6
Q ss_pred eeEEEEechhhhhHhh
Q 045313 16 GLYTFDIGQNDLAGAF 31 (234)
Q Consensus 16 sL~~i~iG~ND~~~~~ 31 (234)
.+-.+++|.+|+...+
T Consensus 163 gvd~l~~G~~DLs~sl 178 (249)
T TIGR02311 163 GVDGVFIGPADLAASM 178 (249)
T ss_pred CCcEEEECHHHHHHhc
Confidence 4778899999998876
No 99
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=21.32 E-value=1.8e+02 Score=24.05 Aligned_cols=37 Identities=11% Similarity=0.169 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCceEEEEechhHH
Q 045313 99 HNQAAKLFNLQLHALCKKLQGDYTDSNITYVDIYTIK 135 (234)
Q Consensus 99 ~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~ 135 (234)
.......|-..|..+++.+++..|+++|++.-.+.++
T Consensus 122 ~~~~~~~~~~~l~~~l~~i~~~~p~a~I~~~gyp~~~ 158 (259)
T cd01823 122 RDAALDEVGARLKAVLDRIRERAPNARVVVVGYPRLF 158 (259)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecccccc
Confidence 3455678888999999999998999999998876654
No 100
>PRK09240 thiH thiamine biosynthesis protein ThiH; Reviewed
Probab=21.29 E-value=3.1e+02 Score=24.63 Aligned_cols=24 Identities=17% Similarity=0.166 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHhCCceEEEec
Q 045313 46 ILEEFETGLRRLYDEGARNFWIHN 69 (234)
Q Consensus 46 ~i~~~~~~i~~L~~~Gar~~vv~~ 69 (234)
..+++.+.++.+.+.|+++|.+++
T Consensus 105 s~eEI~~~a~~~~~~Gv~~i~lvg 128 (371)
T PRK09240 105 DEEEIEREMAAIKKLGFEHILLLT 128 (371)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEee
Confidence 356677778888899999996654
No 101
>TIGR02351 thiH thiazole biosynthesis protein ThiH. Members this protein family are the ThiH protein of thiamine biosynthesis, a homolog of the BioB protein of biotin biosynthesis. Genes for the this protein generally are found in operons with other thiamin biosynthesis genes.
Probab=21.10 E-value=2.8e+02 Score=24.82 Aligned_cols=23 Identities=17% Similarity=0.313 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHhCCceEEEec
Q 045313 47 LEEFETGLRRLYDEGARNFWIHN 69 (234)
Q Consensus 47 i~~~~~~i~~L~~~Gar~~vv~~ 69 (234)
.+++.+.++.+.+.|+++|.+++
T Consensus 105 ~eEI~~~a~~~~~~Gv~~i~lvg 127 (366)
T TIGR02351 105 EEEIEREIEAIKKSGFKEILLVT 127 (366)
T ss_pred HHHHHHHHHHHHhCCCCEEEEee
Confidence 56778888888999999998773
No 102
>PF09677 TrbI_Ftype: Type-F conjugative transfer system protein (TrbI_Ftype); InterPro: IPR014115 This entry represents TrbI, an essential component of the F-type conjugative transfer system for plasmid DNA transfer that has been shown to be localized to the periplasm [, ].
Probab=21.08 E-value=2.5e+02 Score=20.72 Aligned_cols=25 Identities=16% Similarity=0.100 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc
Q 045313 97 SGHNQAAKLFNLQLHALCKKLQGDY 121 (234)
Q Consensus 97 ~~~~~~~~~~N~~L~~~l~~l~~~~ 121 (234)
+.....+..||+.|...|.++++++
T Consensus 57 ~q~~a~t~~F~~aL~~~L~~~~~~h 81 (111)
T PF09677_consen 57 EQVEALTQRFMQALEASLAEYQAEH 81 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4667889999999999999998864
No 103
>PRK10558 alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional
Probab=21.07 E-value=3.7e+02 Score=22.78 Aligned_cols=42 Identities=21% Similarity=0.314 Sum_probs=24.2
Q ss_pred eeEEEEechhhhhHhhc-CCChhhHHhhHHHHHHHHHHHHHHHHHhCC
Q 045313 16 GLYTFDIGQNDLAGAFY-SKTIDQVLASIPKILEEFETGLRRLYDEGA 62 (234)
Q Consensus 16 sL~~i~iG~ND~~~~~~-~~~~~~~~~~v~~~i~~~~~~i~~L~~~Ga 62 (234)
.+-.+++|.||+...+- ...... +.+...+...++...++|.
T Consensus 169 gvd~l~iG~~DLs~slG~~~~~~~-----~~v~~a~~~v~~aa~~~G~ 211 (256)
T PRK10558 169 GVDGIFVGPSDLAAALGHLGNASH-----PDVQKAIQHIFARAKAHGK 211 (256)
T ss_pred CCcEEEECHHHHHHHcCCCCCCCC-----HHHHHHHHHHHHHHHHcCC
Confidence 47788999999987652 111111 2334444555555556665
No 104
>PF12872 OST-HTH: OST-HTH/LOTUS domain; PDB: 2KPM_A 3S93_B 3RCO_A 2KZV_A.
Probab=20.98 E-value=1.3e+02 Score=19.72 Aligned_cols=27 Identities=11% Similarity=0.053 Sum_probs=20.3
Q ss_pred eEEEEechhHHHHHH--HcccCCCccccc
Q 045313 125 NITYVDIYTIKYSLI--ANYSRYGFEQPI 151 (234)
Q Consensus 125 ~i~~~D~~~~~~~i~--~nP~~yGf~~~~ 151 (234)
.+.+.++...+.... =+|..|||+...
T Consensus 23 ~v~ls~l~~~~~~~~~~f~~~~yG~~~l~ 51 (74)
T PF12872_consen 23 WVSLSQLGQEYKKKYPDFDPRDYGFSSLS 51 (74)
T ss_dssp SEEHHHHHHHHHHHHTT--TCCTTSSSHH
T ss_pred eEEHHHHHHHHHHHCCCCCccccCCCcHH
Confidence 688888888888887 368999997654
No 105
>PRK00035 hemH ferrochelatase; Reviewed
Probab=20.97 E-value=2.2e+02 Score=24.98 Aligned_cols=44 Identities=7% Similarity=0.107 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhCCceEEEecCCCCCCccchhhhccCCcCCCCCCCccHHHHHHHHHHHHHHHH
Q 045313 50 FETGLRRLYDEGARNFWIHNTGPLGCLAQNVAKFGTDLSMLDELGCVSGHNQAAKLFNLQLHA 112 (234)
Q Consensus 50 ~~~~i~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~ 112 (234)
+.+.|++|.+.|.|+|+|+ |..... .|.+.+.++...+...+.+
T Consensus 250 ~~~~l~~l~~~g~k~V~v~--------P~~Fv~-----------D~lEtl~ei~~e~~~~~~~ 293 (333)
T PRK00035 250 TDDTLEELAEKGVKKVVVV--------PPGFVS-----------DHLETLEEIDIEYREIAEE 293 (333)
T ss_pred HHHHHHHHHHcCCCeEEEE--------CCeeec-----------cchhHHHHHHHHHHHHHHH
No 106
>PRK00923 sirohydrochlorin cobaltochelatase; Reviewed
Probab=20.93 E-value=1.1e+02 Score=22.53 Aligned_cols=20 Identities=20% Similarity=0.390 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHhCCceEEEe
Q 045313 49 EFETGLRRLYDEGARNFWIH 68 (234)
Q Consensus 49 ~~~~~i~~L~~~Gar~~vv~ 68 (234)
.+.+.+++|.+.|+++++|+
T Consensus 47 ~l~~~l~~l~~~g~~~v~vv 66 (126)
T PRK00923 47 TIPEALKKLIGTGADKIIVV 66 (126)
T ss_pred CHHHHHHHHHHcCCCEEEEE
Confidence 47788899999999999986
No 107
>COG4053 Uncharacterized protein conserved in archaea [Function unknown]
Probab=20.54 E-value=4.9e+02 Score=21.44 Aligned_cols=27 Identities=19% Similarity=0.176 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHhCCceEEEecCC
Q 045313 45 KILEEFETGLRRLYDEGARNFWIHNTG 71 (234)
Q Consensus 45 ~~i~~~~~~i~~L~~~Gar~~vv~~lp 71 (234)
.+...+.+.|+.|...++-+..+.|+-
T Consensus 23 ~l~~~ve~~ik~ll~~~~~~a~l~nit 49 (244)
T COG4053 23 KLNELVEKEIKKLLSKLGIKATLSNIT 49 (244)
T ss_pred HHHHHHHHHHHHHHHhhcceeEecccc
Confidence 567778888888888888777777653
No 108
>TIGR00175 mito_nad_idh isocitrate dehydrogenase, NAD-dependent, mitochondrial type. The NADP-dependent IDH of Thermus aquaticus thermophilus strain HB8 resembles these NAD-dependent IDH, except for the residues involved in cofactor specificity, much more closely than it resembles other prokaryotic NADP-dependent IDH, including that of Thermus aquaticus strain YT1.
Probab=20.52 E-value=1.4e+02 Score=26.53 Aligned_cols=39 Identities=13% Similarity=0.292 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHhhcCCceEEEEechhHHHHHHHcccCCC
Q 045313 108 LQLHALCKKLQGDYTDSNITYVDIYTIKYSLIANYSRYG 146 (234)
Q Consensus 108 ~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yG 146 (234)
...++.++++.++||++.+-..=+-.+...++.+|..|.
T Consensus 180 glf~~~~~eva~~yp~v~~~~~~vDa~~~~lv~~P~~fd 218 (333)
T TIGR00175 180 GLFLNVCREVAKEYPDITFESMIVDNTCMQLVSRPSQFD 218 (333)
T ss_pred HHHHHHHHHHHHHCCCCeeeeeeHHHHHHHHhcCccccc
Confidence 344555666777899998888888889999999999985
No 109
>KOG0907 consensus Thioredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=20.28 E-value=1.5e+02 Score=21.61 Aligned_cols=32 Identities=19% Similarity=0.172 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhhcCCceEEEEechhHHHHHHH
Q 045313 108 LQLHALCKKLQGDYTDSNITYVDIYTIKYSLIA 140 (234)
Q Consensus 108 ~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~ 140 (234)
..+.-.+.+|..+||++.++-+|+.. ..++.+
T Consensus 37 k~i~P~~~~La~~y~~v~Flkvdvde-~~~~~~ 68 (106)
T KOG0907|consen 37 KAIAPKFEKLAEKYPDVVFLKVDVDE-LEEVAK 68 (106)
T ss_pred hhhhhHHHHHHHHCCCCEEEEEeccc-CHhHHH
Confidence 34455788899999999999999998 555543
No 110
>PRK00489 hisG ATP phosphoribosyltransferase; Reviewed
Probab=20.21 E-value=1.1e+02 Score=26.23 Aligned_cols=23 Identities=17% Similarity=0.137 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHhCCceEEEecC
Q 045313 48 EEFETGLRRLYDEGARNFWIHNT 70 (234)
Q Consensus 48 ~~~~~~i~~L~~~Gar~~vv~~l 70 (234)
+.+.+.+.+|.++||+-|+|..+
T Consensus 260 ~~~~~~~~~l~~~ga~~i~~~~i 282 (287)
T PRK00489 260 DLVWELMDKLKALGARGILVLPI 282 (287)
T ss_pred HHHHHHHHHHHHcCCCeEEEech
Confidence 45778889999999999999753
Done!