BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045320
(849 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 29/179 (16%)
Query: 171 EMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSN 230
E ++ L QI ++LH N R+IHR + N+ + + K+G FG A
Sbjct: 140 EARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATK---------- 188
Query: 231 VQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
EYD E + L + NY APE++ K +SF D++S GC+ Y L+ KP F
Sbjct: 189 ------VEYDGERKKV-LCGTPNYIAPEVLSKKGHSF--EVDVWSIGCIMYTLLVGKPPF 239
Query: 291 DCNNNVKMYMNTLTYLSSDAFSSIPSDLVPD----LQKMLSANESFRPTAMDFTGSRFF 345
+ + + Y+ + + + SIP + P +QKML + + RPT + FF
Sbjct: 240 ETSCLKETYLR----IKKNEY-SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 293
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 29/179 (16%)
Query: 171 EMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSN 230
E ++ L QI ++LH N R+IHR + N+ + + K+G FG A
Sbjct: 142 EARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATK---------- 190
Query: 231 VQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
EYD E + L + NY APE++ K +SF D++S GC+ Y L+ KP F
Sbjct: 191 ------VEYDGERKKV-LCGTPNYIAPEVLSKKGHSF--EVDVWSIGCIMYTLLVGKPPF 241
Query: 291 DCNNNVKMYMNTLTYLSSDAFSSIPSDLVPD----LQKMLSANESFRPTAMDFTGSRFF 345
+ + + Y+ + + + SIP + P +QKML + + RPT + FF
Sbjct: 242 ETSCLKETYLR----IKKNEY-SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 295
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 29/179 (16%)
Query: 171 EMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSN 230
E ++ L QI ++LH N R+IHR + N+ + + K+G FG A
Sbjct: 116 EARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATK---------- 164
Query: 231 VQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
EYD E + L + NY APE++ K +SF D++S GC+ Y L+ KP F
Sbjct: 165 ------VEYDGERKKV-LCGTPNYIAPEVLSKKGHSF--EVDVWSIGCIMYTLLVGKPPF 215
Query: 291 DCNNNVKMYMNTLTYLSSDAFSSIPSDLVPD----LQKMLSANESFRPTAMDFTGSRFF 345
+ + + Y+ + + + SIP + P +QKML + + RPT + FF
Sbjct: 216 ETSCLKETYLR----IKKNEY-SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 269
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 119/287 (41%), Gaps = 49/287 (17%)
Query: 34 KALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGL 93
+A Q YE + +IG G +K ARD+ + ++ AL R + G
Sbjct: 8 RADQQYECVAEIGEGAYGKVFK-----ARDL-KNGGRFV----------ALKRVRVQTG- 50
Query: 94 TKSAEDAFLDLVRADA--GKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGN 151
E L +R A L HP +V + ++ +F V L
Sbjct: 51 ---EEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTT 107
Query: 152 FENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWK 211
+ + KVP E +K + Q+ L+FLHS+ R++HR + P+NIL+TS+G K
Sbjct: 108 Y--LDKVPEPGVPTET----IKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSGQIK 160
Query: 212 LGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS 271
L FG A + +F A + + +L Y APE++ +S+
Sbjct: 161 LADFGLA-----------RIYSFQMA-------LTSVVVTLWYRAPEVLLQ--SSYATPV 200
Query: 272 DIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDL 318
D++S GC+ + RKPLF +++V L + P D+
Sbjct: 201 DLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 247
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 29/179 (16%)
Query: 171 EMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSN 230
E ++ L QI ++LH N R+IHR + N+ + + K+G FG A
Sbjct: 122 EARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATK---------- 170
Query: 231 VQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
EYD E L + NY APE++ K +SF D++S GC+ Y L+ KP F
Sbjct: 171 ------VEYDGERKKT-LCGTPNYIAPEVLSKKGHSF--EVDVWSIGCIMYTLLVGKPPF 221
Query: 291 DCNNNVKMYMNTLTYLSSDAFSSIPSDLVPD----LQKMLSANESFRPTAMDFTGSRFF 345
+ + + Y+ + + + SIP + P +QKML + + RPT + FF
Sbjct: 222 ETSCLKETYLR----IKKNEY-SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 275
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 28/185 (15%)
Query: 111 KLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLL 170
+L HP +V ++ ++ + +F V L + + + P GL +
Sbjct: 59 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPP----GLPAETI 114
Query: 171 EMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSN 230
K + Q L+FLH+N ++HR + PENIL+TS G KL FG A
Sbjct: 115 --KDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGTVKLADFGLA------------ 159
Query: 231 VQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
Y + ++ P+ +L Y APE++ T + D++S GC+ + RKPLF
Sbjct: 160 ------RIYSYQMALFPVVVTLWYRAPEVLLQST--YATPVDMWSVGCIFAEMFRRKPLF 211
Query: 291 DCNNN 295
C N+
Sbjct: 212 -CGNS 215
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 29/179 (16%)
Query: 171 EMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSN 230
E ++ L QI ++LH N R+IHR + N+ + + K+G FG A
Sbjct: 118 EARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATK---------- 166
Query: 231 VQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
EYD E L + NY APE++ K +SF D++S GC+ Y L+ KP F
Sbjct: 167 ------VEYDGERKKT-LCGTPNYIAPEVLSKKGHSF--EVDVWSIGCIMYTLLVGKPPF 217
Query: 291 DCNNNVKMYMNTLTYLSSDAFSSIPSDLVPD----LQKMLSANESFRPTAMDFTGSRFF 345
+ + + Y+ + + + SIP + P +QKML + + RPT + FF
Sbjct: 218 ETSCLKETYLR----IKKNEY-SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 271
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 29/179 (16%)
Query: 171 EMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSN 230
E ++ L QI ++LH N R+IHR + N+ + + K+G FG A
Sbjct: 118 EARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATK---------- 166
Query: 231 VQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
EYD E L + NY APE++ K +SF D++S GC+ Y L+ KP F
Sbjct: 167 ------VEYDGERKKT-LCGTPNYIAPEVLSKKGHSF--EVDVWSIGCIMYTLLVGKPPF 217
Query: 291 DCNNNVKMYMNTLTYLSSDAFSSIPSDLVPD----LQKMLSANESFRPTAMDFTGSRFF 345
+ + + Y+ + + + SIP + P +QKML + + RPT + FF
Sbjct: 218 ETSCLKETYLR----IKKNEY-SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 271
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 119/287 (41%), Gaps = 49/287 (17%)
Query: 34 KALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGL 93
+A Q YE + +IG G +K ARD+ + ++ AL R + G
Sbjct: 8 RADQQYECVAEIGEGAYGKVFK-----ARDL-KNGGRFV----------ALKRVRVQTG- 50
Query: 94 TKSAEDAFLDLVRADA--GKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGN 151
E L +R A L HP +V + ++ +F V L
Sbjct: 51 ---EEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTT 107
Query: 152 FENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWK 211
+ + KVP E +K + Q+ L+FLHS+ R++HR + P+NIL+TS+G K
Sbjct: 108 Y--LDKVPEPGVPTET----IKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSGQIK 160
Query: 212 LGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS 271
L FG A + +F A + + +L Y APE++ +S+
Sbjct: 161 LADFGLA-----------RIYSFQMA-------LTSVVVTLWYRAPEVLLQ--SSYATPV 200
Query: 272 DIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDL 318
D++S GC+ + RKPLF +++V L + P D+
Sbjct: 201 DLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 247
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 119/287 (41%), Gaps = 49/287 (17%)
Query: 34 KALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGL 93
+A Q YE + +IG G +K ARD+ + ++ AL R + G
Sbjct: 8 RADQQYECVAEIGEGAYGKVFK-----ARDL-KNGGRFV----------ALKRVRVQTG- 50
Query: 94 TKSAEDAFLDLVRADA--GKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGN 151
E L +R A L HP +V + ++ +F V L
Sbjct: 51 ---EEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTT 107
Query: 152 FENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWK 211
+ + KVP E +K + Q+ L+FLHS+ R++HR + P+NIL+TS+G K
Sbjct: 108 Y--LDKVPEPGVPTET----IKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSGQIK 160
Query: 212 LGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS 271
L FG A + +F A + + +L Y APE++ +S+
Sbjct: 161 LADFGLA-----------RIYSFQMA-------LTSVVVTLWYRAPEVLLQ--SSYATPV 200
Query: 272 DIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDL 318
D++S GC+ + RKPLF +++V L + P D+
Sbjct: 201 DLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 247
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 28/185 (15%)
Query: 111 KLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLL 170
+L HP +V ++ ++ + +F V L + + + P GL +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPP----GLPAETI 122
Query: 171 EMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSN 230
K + Q L+FLH+N ++HR + PENIL+TS G KL FG A
Sbjct: 123 --KDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGTVKLADFGLA------------ 167
Query: 231 VQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
Y + ++ P+ +L Y APE++ T + D++S GC+ + RKPLF
Sbjct: 168 ------RIYSYQMALTPVVVTLWYRAPEVLLQST--YATPVDMWSVGCIFAEMFRRKPLF 219
Query: 291 DCNNN 295
C N+
Sbjct: 220 -CGNS 223
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 28/185 (15%)
Query: 111 KLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLL 170
+L HP +V ++ ++ + +F V L + + + P GL +
Sbjct: 59 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPP----GLPAETI 114
Query: 171 EMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSN 230
K + Q L+FLH+N ++HR + PENIL+TS G KL FG A
Sbjct: 115 --KDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGTVKLADFGLA------------ 159
Query: 231 VQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
Y + ++ P+ +L Y APE++ T + D++S GC+ + RKPLF
Sbjct: 160 ------RIYSYQMALAPVVVTLWYRAPEVLLQST--YATPVDMWSVGCIFAEMFRRKPLF 211
Query: 291 DCNNN 295
C N+
Sbjct: 212 -CGNS 215
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 95/231 (41%), Gaps = 32/231 (13%)
Query: 105 VRADAGKLVRLRHPGIVHVVQAM-DENKNAMAMVTEPLFASVANVLGNFENVSKVPRELK 163
V+ + L RLRH ++ +V + +E K M MV E V G E + VP +
Sbjct: 53 VKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVME------YCVCGMQEMLDSVPEK-- 104
Query: 164 GLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQ 223
+ + Q+ + LE+LHS ++H+ I P N+L+T+ G K+ G A
Sbjct: 105 --RFPVCQAHGYFCQLIDGLEYLHSQG-IVHKDIKPGNLLLTTGGTLKISALGVA----- 156
Query: 224 AISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
+A H + +D+ Q S + PE+ G DI+S G Y++
Sbjct: 157 --------EALH--PFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNI 206
Query: 284 IARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRP 334
F+ +N K++ N +IP D P L +L + P
Sbjct: 207 TTGLYPFEGDNIYKLFENI-----GKGSYAIPGDCGPPLSDLLKGMLEYEP 252
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 28/185 (15%)
Query: 111 KLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLL 170
+L HP +V ++ ++ + +F V L + + + P GL +
Sbjct: 59 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPP----GLPAETI 114
Query: 171 EMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSN 230
K + Q L+FLH+N ++HR + PENIL+TS G KL FG A
Sbjct: 115 --KDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGTVKLADFGLA------------ 159
Query: 231 VQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
Y + ++ P+ +L Y APE++ T + D++S GC+ + RKPLF
Sbjct: 160 ------RIYSYQMALDPVVVTLWYRAPEVLLQST--YATPVDMWSVGCIFAEMFRRKPLF 211
Query: 291 DCNNN 295
C N+
Sbjct: 212 -CGNS 215
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 26/181 (14%)
Query: 115 LRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKH 174
L+H IV + + +N + +V F + N L + + V +GLE++L+ K+
Sbjct: 60 LKHENIVRLYDVI-HTENKLTLV----FEFMDNDLKKYMDSRTVGNTPRGLELNLV--KY 112
Query: 175 GLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAF 234
Q+ + L F H N +++HR + P+N+LI G KLG FG A + ++ S+
Sbjct: 113 FQWQLLQGLAFCHEN-KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV- 170
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNN 294
+L Y AP+++ + ++ S DI+S GC+ +I KPLF N
Sbjct: 171 ----------------TLWYRAPDVLMG-SRTYSTSIDIWSCGCILAEMITGKPLFPGTN 213
Query: 295 N 295
+
Sbjct: 214 D 214
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 116/265 (43%), Gaps = 52/265 (19%)
Query: 32 GPKALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARA 91
GP ++++++ +++IG G+ +K + +V AL + R
Sbjct: 1 GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVV-----------------ALKKIR--- 40
Query: 92 GLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGN 151
L E +R + L L HP IV ++ + +N + +V F V L
Sbjct: 41 -LDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVI-HTENKLYLV----FEHVDQDLKK 93
Query: 152 FENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWK 211
F + S L G+ + L+ K L Q+ + L F HS+ R++HR + P+N+LI + GA K
Sbjct: 94 FMDASA----LTGIPLPLI--KSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIK 146
Query: 212 LGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS 271
L FG A +AF ++ +L Y APE++ + +
Sbjct: 147 LADFGLA-------------RAFGVPVRTYXHEVV----TLWYRAPEILLG-CKYYSTAV 188
Query: 272 DIFSFGCVAYHLIARKPLFDCNNNV 296
DI+S GC+ ++ R+ LF ++ +
Sbjct: 189 DIWSLGCIFAEMVTRRALFPGDSEI 213
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 25/177 (14%)
Query: 171 EMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSN 230
E ++ + Q + +++LH+N R+IHR + N+ + + K+G FG A
Sbjct: 143 EARYFMRQTIQGVQYLHNN-RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--------- 192
Query: 231 VQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
E+D E L + NY APE++ K +SF DI+S GC+ Y L+ KP F
Sbjct: 193 -------EFDGERKKX-LCGTPNYIAPEVLCKKGHSF--EVDIWSLGCILYTLLVGKPPF 242
Query: 291 D--CNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFF 345
+ C + + Y + + S L+ ++ML A+ + RP+ + FF
Sbjct: 243 ETSCLKETYIRIKKNEYSVPRHINPVASALI---RRMLHADPTLRPSVAELLTDEFF 296
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 25/177 (14%)
Query: 171 EMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSN 230
E ++ + Q + +++LH+N R+IHR + N+ + + K+G FG A
Sbjct: 143 EARYFMRQTIQGVQYLHNN-RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--------- 192
Query: 231 VQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
E+D E L + NY APE++ K +SF DI+S GC+ Y L+ KP F
Sbjct: 193 -------EFDGERKKT-LCGTPNYIAPEVLCKKGHSF--EVDIWSLGCILYTLLVGKPPF 242
Query: 291 D--CNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFF 345
+ C + + Y + + S L+ ++ML A+ + RP+ + FF
Sbjct: 243 ETSCLKETYIRIKKNEYSVPRHINPVASALI---RRMLHADPTLRPSVAELLTDEFF 296
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 87/185 (47%), Gaps = 30/185 (16%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + +N + +V E L L +F + S L G+ + L+
Sbjct: 56 LKELNHPNIVKLLDVI-HTENKLYLVFEFLHQD----LKDFMDASA----LTGIPLPLI- 105
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K L Q+ + L F HS+ R++HR + PEN+LI + GA KL FG A + V
Sbjct: 106 -KSYLFQLLQGLAFCHSH-RVLHRDLKPENLLINTEGAIKLADFGLA--------RAFGV 155
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
Y V +L Y APE++ + + DI+S GC+ ++ R+ LF
Sbjct: 156 PVRTYXHEVV---------TLWYRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFP 205
Query: 292 CNNNV 296
++ +
Sbjct: 206 GDSEI 210
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 30/185 (16%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + +N + +V F V L F + S L G+ + L+
Sbjct: 55 LKELNHPNIVKLLDVI-HTENKLYLV----FEHVHQDLKTFMDASA----LTGIPLPLI- 104
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K L Q+ + L F HS+ R++HR + P+N+LI + GA KL FG A + + ++
Sbjct: 105 -KSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 162
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
+L Y APE++ + + DI+S GC+ ++ R+ LF
Sbjct: 163 VV-----------------TLWYRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFP 204
Query: 292 CNNNV 296
++ +
Sbjct: 205 GDSEI 209
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 25/177 (14%)
Query: 171 EMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSN 230
E ++ + Q + +++LH+N R+IHR + N+ + + K+G FG A
Sbjct: 143 EARYFMRQTIQGVQYLHNN-RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--------- 192
Query: 231 VQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
E+D E L + NY APE++ K +SF DI+S GC+ Y L+ KP F
Sbjct: 193 -------EFDGERKK-DLCGTPNYIAPEVLCKKGHSF--EVDIWSLGCILYTLLVGKPPF 242
Query: 291 D--CNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFF 345
+ C + + Y + + S L+ ++ML A+ + RP+ + FF
Sbjct: 243 ETSCLKETYIRIKKNEYSVPRHINPVASALI---RRMLHADPTLRPSVAELLTDEFF 296
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 31/255 (12%)
Query: 105 VRADAGKLVRLRHPGIVHVVQA-MDENKNAMAMVTEP-LFASVANVLGNFENV-----SK 157
V + L +L HPGIV A +++N + P ++ + L EN+ +
Sbjct: 50 VMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGR 109
Query: 158 VPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGF 217
E + + L H LQIAE++EFLHS L+HR + P NI T + K+G FG
Sbjct: 110 CTIEERERSVCL----HIFLQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGL 164
Query: 218 AISTDQAISDSSNVQAF-HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSF 276
+ DQ + + + YA + + + Y +PE + NS+ DIFS
Sbjct: 165 VTAMDQDEEEQTVLTPMPAYARHTGQVG------TKLYMSPEQIHG--NSYSHKVDIFSL 216
Query: 277 GCVAYHLIARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPD----LQKMLSANESF 332
G + + L+ P V+ TLT + + F + + P +Q MLS +
Sbjct: 217 GLILFELLY--PFSTQMERVR----TLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPME 270
Query: 333 RPTAMDFTGSRFFRD 347
RP A++ + F D
Sbjct: 271 RPEAINIIENAVFED 285
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 25/177 (14%)
Query: 171 EMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSN 230
E ++ + Q + +++LH+N R+IHR + N+ + + K+G FG A
Sbjct: 127 EARYFMRQTIQGVQYLHNN-RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--------- 176
Query: 231 VQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
E+D E L + NY APE++ K +SF DI+S GC+ Y L+ KP F
Sbjct: 177 -------EFDGERKK-DLCGTPNYIAPEVLCKKGHSF--EVDIWSLGCILYTLLVGKPPF 226
Query: 291 D--CNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFF 345
+ C + + Y + + S L+ ++ML A+ + RP+ + FF
Sbjct: 227 ETSCLKETYIRIKKNEYSVPRHINPVASALI---RRMLHADPTLRPSVAELLTDEFF 280
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 30/185 (16%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + +N + +V E F S+ L F + S L G+ + L+
Sbjct: 59 LKELNHPNIVKLLDVI-HTENKLYLVFE--FLSMD--LKKFMDASA----LTGIPLPLI- 108
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K L Q+ + L F HS+ R++HR + PEN+LI + GA KL FG A + V
Sbjct: 109 -KSYLFQLLQGLAFCHSH-RVLHRDLKPENLLINTEGAIKLADFGLA--------RAFGV 158
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
Y V +L Y APE++ + + DI+S GC+ ++ R+ LF
Sbjct: 159 PVRTYXHEVV---------TLWYRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFP 208
Query: 292 CNNNV 296
++ +
Sbjct: 209 GDSEI 213
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 30/185 (16%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + +N + +V E F S+ L F + S L G+ + L+
Sbjct: 57 LKELNHPNIVKLLDVI-HTENKLYLVFE--FLSMD--LKKFMDASA----LTGIPLPLI- 106
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K L Q+ + L F HS+ R++HR + PEN+LI + GA KL FG A + V
Sbjct: 107 -KSYLFQLLQGLAFCHSH-RVLHRDLKPENLLINTEGAIKLADFGLA--------RAFGV 156
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
Y V +L Y APE++ + + DI+S GC+ ++ R+ LF
Sbjct: 157 PVRTYXHEVV---------TLWYRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFP 206
Query: 292 CNNNV 296
++ +
Sbjct: 207 GDSEI 211
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 30/185 (16%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + +N + +V E L L F + S L G+ + L+
Sbjct: 58 LKELNHPNIVKLLDVI-HTENKLYLVFEFLHQD----LKKFMDASA----LTGIPLPLI- 107
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K L Q+ + L F HS+ R++HR + PEN+LI + GA KL FG A + V
Sbjct: 108 -KSYLFQLLQGLAFCHSH-RVLHRDLKPENLLINTEGAIKLADFGLA--------RAFGV 157
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
Y V +L Y APE++ + + DI+S GC+ ++ R+ LF
Sbjct: 158 PVRTYXHEVV---------TLWYRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFP 207
Query: 292 CNNNV 296
++ +
Sbjct: 208 GDSEI 212
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 115/265 (43%), Gaps = 52/265 (19%)
Query: 32 GPKALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARA 91
GP ++++++ +++IG G+ +K + +V AL + R
Sbjct: 1 GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVV-----------------ALKKIR--- 40
Query: 92 GLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGN 151
L E +R + L L HP IV ++ + +N + +V E L L
Sbjct: 41 -LDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVI-HTENKLYLVFEFLHQD----LKT 93
Query: 152 FENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWK 211
F + S L G+ + L+ K L Q+ + L F HS+ R++HR + P+N+LI + GA K
Sbjct: 94 FMDASA----LTGIPLPLI--KSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIK 146
Query: 212 LGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS 271
L FG A + V Y V +L Y APE++ + +
Sbjct: 147 LADFGLA--------RAFGVPVRTYXHEVV---------TLWYRAPEILLG-CKYYSTAV 188
Query: 272 DIFSFGCVAYHLIARKPLFDCNNNV 296
DI+S GC+ ++ R+ LF ++ +
Sbjct: 189 DIWSLGCIFAEMVTRRALFPGDSEI 213
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 115/265 (43%), Gaps = 52/265 (19%)
Query: 32 GPKALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARA 91
GP ++++++ +++IG G+ +K + +V AL + R
Sbjct: 1 GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVV-----------------ALKKIR--- 40
Query: 92 GLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGN 151
L E +R + L L HP IV ++ + +N + +V E L L
Sbjct: 41 -LDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVI-HTENKLYLVFEFLHQD----LKK 93
Query: 152 FENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWK 211
F + S L G+ + L+ K L Q+ + L F HS+ R++HR + P+N+LI + GA K
Sbjct: 94 FMDASA----LTGIPLPLI--KSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIK 146
Query: 212 LGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS 271
L FG A + V Y V +L Y APE++ + +
Sbjct: 147 LADFGLA--------RAFGVPVRTYXHEVV---------TLWYRAPEILLG-CKYYSTAV 188
Query: 272 DIFSFGCVAYHLIARKPLFDCNNNV 296
DI+S GC+ ++ R+ LF ++ +
Sbjct: 189 DIWSLGCIFAEMVTRRALFPGDSEI 213
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 30/185 (16%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + +N + +V E L L F + S L G+ + L+
Sbjct: 57 LKELNHPNIVKLLDVI-HTENKLYLVFEFLHQD----LKKFMDASA----LTGIPLPLI- 106
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K L Q+ + L F HS+ R++HR + PEN+LI + GA KL FG A + V
Sbjct: 107 -KSYLFQLLQGLAFCHSH-RVLHRDLKPENLLINTEGAIKLADFGLA--------RAFGV 156
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
Y V +L Y APE++ + + DI+S GC+ ++ R+ LF
Sbjct: 157 PVRTYXHEVV---------TLWYRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFP 206
Query: 292 CNNNV 296
++ +
Sbjct: 207 GDSEI 211
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 30/185 (16%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + +N + +V E L L F + S L G+ + L+
Sbjct: 56 LKELNHPNIVKLLDVI-HTENKLYLVFEFLHQD----LKKFMDASA----LTGIPLPLI- 105
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K L Q+ + L F HS+ R++HR + P+N+LI + GA KL FG A + + ++
Sbjct: 106 -KSYLFQLLQGLSFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 163
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
+L Y APE++ + + DI+S GC+ ++ R+ LF
Sbjct: 164 VV-----------------TLWYRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFP 205
Query: 292 CNNNV 296
++ +
Sbjct: 206 GDSEI 210
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 30/185 (16%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + +N + +V E L L F + S L G+ + L+
Sbjct: 56 LKELNHPNIVKLLDVI-HTENKLYLVFEFLHQD----LKKFMDASA----LTGIPLPLI- 105
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K L Q+ + L F HS+ R++HR + P+N+LI + GA KL FG A + + ++
Sbjct: 106 -KSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 163
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
+L Y APE++ + + DI+S GC+ ++ R+ LF
Sbjct: 164 VV-----------------TLWYRAPEILLG-XKYYSTAVDIWSLGCIFAEMVTRRALFP 205
Query: 292 CNNNV 296
++ +
Sbjct: 206 GDSEI 210
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 126/302 (41%), Gaps = 60/302 (19%)
Query: 35 ALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLT 94
AL+D+E+ +G G +Y AR + Q+++ ++ + VL K L +A L
Sbjct: 7 ALEDFEIGRPLGKGKFG---NVYLAREK-----QSKF-ILALKVLFKAQLEKAGVEHQLR 57
Query: 95 KSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFEN 154
+ E LRHP I+ + + ++ +A + V +
Sbjct: 58 REVEIQ------------SHLRHPNILRLYGYFHDATRVYLILE---YAPLGTVYRELQK 102
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
+SK + ++ ++A +L + HS R+IHR I PEN+L+ S G K+
Sbjct: 103 LSKFDEQRTATYIT---------ELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIAD 152
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIF 274
FG+++ + D+ L +L+Y PE++ + + D++
Sbjct: 153 FGWSVHAPSSRRDT-------------------LCGTLDYLPPEMIEGRMHD--EKVDLW 191
Query: 275 SFGCVAYHLIARKPLFDCNNNVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLSANESF 332
S G + Y + KP F+ N + Y ++ + + D + DL+ ++L N S
Sbjct: 192 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQ 248
Query: 333 RP 334
RP
Sbjct: 249 RP 250
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 30/197 (15%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + +N + +V E L L F + S L G+ + L+
Sbjct: 60 LKELNHPNIVKLLDVI-HTENKLYLVFEFLHQD----LKKFMDASA----LTGIPLPLI- 109
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K L Q+ + L F HS+ R++HR + P+N+LI + GA KL FG A + + ++
Sbjct: 110 -KSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 167
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
+L Y APE++ + + DI+S GC+ ++ R+ LF
Sbjct: 168 VV-----------------TLWYRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFP 209
Query: 292 CNNNVKMYMNTLTYLSS 308
++ + L +
Sbjct: 210 GDSEIDQLFRIFRTLGT 226
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 125/302 (41%), Gaps = 60/302 (19%)
Query: 35 ALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLT 94
AL+D+E+ +G G +Y AR + Q+++ ++ + VL K L +A L
Sbjct: 9 ALEDFEIGRPLGKGKFG---NVYLAREK-----QSKF-ILALKVLFKAQLEKAGVEHQLR 59
Query: 95 KSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFEN 154
+ E LRHP I+ + + ++ +A + V +
Sbjct: 60 REVEIQ------------SHLRHPNILRLYGYFHDATRVYLILE---YAPLGTVYRELQK 104
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
+SK + ++ ++A +L + HS R+IHR I PEN+L+ S G K+
Sbjct: 105 LSKFDEQRTATYIT---------ELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIAD 154
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIF 274
FG+++ + D L +L+Y PE++ + + D++
Sbjct: 155 FGWSVHAPSSRRDD-------------------LCGTLDYLPPEMIEGRMHD--EKVDLW 193
Query: 275 SFGCVAYHLIARKPLFDCNNNVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLSANESF 332
S G + Y + KP F+ N + Y ++ + + D + DL+ ++L N S
Sbjct: 194 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQ 250
Query: 333 RP 334
RP
Sbjct: 251 RP 252
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 30/185 (16%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + +N + +V E L L F + S L G+ + L+
Sbjct: 56 LKELNHPNIVKLLDVI-HTENKLYLVFEFLHQD----LKKFMDASA----LTGIPLPLI- 105
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K L Q+ + L F HS+ R++HR + P+N+LI + GA KL FG A + + ++
Sbjct: 106 -KSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 163
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
+L Y APE++ + + DI+S GC+ ++ R+ LF
Sbjct: 164 VV-----------------TLWYRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFP 205
Query: 292 CNNNV 296
++ +
Sbjct: 206 GDSEI 210
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 30/185 (16%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + +N + +V E L L F + S L G+ + L+
Sbjct: 55 LKELNHPNIVKLLDVI-HTENKLYLVFEFLHQD----LKKFMDASA----LTGIPLPLI- 104
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K L Q+ + L F HS+ R++HR + P+N+LI + GA KL FG A + + ++
Sbjct: 105 -KSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 162
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
+L Y APE++ + + DI+S GC+ ++ R+ LF
Sbjct: 163 VV-----------------TLWYRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFP 204
Query: 292 CNNNV 296
++ +
Sbjct: 205 GDSEI 209
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 30/185 (16%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + +N + +V E F S+ L +F + S L G+ + L+
Sbjct: 58 LKELNHPNIVKLLDVI-HTENKLYLVFE--FLSMD--LKDFMDASA----LTGIPLPLI- 107
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K L Q+ + L F HS+ R++HR + P+N+LI + GA KL FG A + V
Sbjct: 108 -KSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGV 157
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
Y V +L Y APE++ + + DI+S GC+ ++ R+ LF
Sbjct: 158 PVRTYXHEVV---------TLWYRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFP 207
Query: 292 CNNNV 296
++ +
Sbjct: 208 GDSEI 212
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 30/185 (16%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + +N + +V E F S+ L +F + S L G+ + L+
Sbjct: 59 LKELNHPNIVKLLDVI-HTENKLYLVFE--FLSMD--LKDFMDASA----LTGIPLPLI- 108
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K L Q+ + L F HS+ R++HR + P+N+LI + GA KL FG A + V
Sbjct: 109 -KSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGV 158
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
Y V +L Y APE++ + + DI+S GC+ ++ R+ LF
Sbjct: 159 PVRTYXHEVV---------TLWYRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFP 208
Query: 292 CNNNV 296
++ +
Sbjct: 209 GDSEI 213
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 30/185 (16%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + +N + +V E L L F + S L G+ + L+
Sbjct: 55 LKELNHPNIVKLLDVI-HTENKLYLVFEFLHQD----LKKFMDASA----LTGIPLPLI- 104
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K L Q+ + L F HS+ R++HR + P+N+LI + GA KL FG A + + ++
Sbjct: 105 -KSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 162
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
+L Y APE++ + + DI+S GC+ ++ R+ LF
Sbjct: 163 VV-----------------TLWYRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFP 204
Query: 292 CNNNV 296
++ +
Sbjct: 205 GDSEI 209
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 30/185 (16%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + +N + +V E L L F + S L G+ + L+
Sbjct: 56 LKELNHPNIVKLLDVI-HTENKLYLVFEFLHQD----LKKFMDASA----LTGIPLPLI- 105
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K L Q+ + L F HS+ R++HR + P+N+LI + GA KL FG A + + ++
Sbjct: 106 -KSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 163
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
+L Y APE++ + + DI+S GC+ ++ R+ LF
Sbjct: 164 VV-----------------TLWYRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFP 205
Query: 292 CNNNV 296
++ +
Sbjct: 206 GDSEI 210
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 30/185 (16%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + +N + +V E L L F + S L G+ + L+
Sbjct: 57 LKELNHPNIVKLLDVI-HTENKLYLVFEFLHQD----LKKFMDASA----LTGIPLPLI- 106
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K L Q+ + L F HS+ R++HR + P+N+LI + GA KL FG A + + ++
Sbjct: 107 -KSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 164
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
+L Y APE++ + + DI+S GC+ ++ R+ LF
Sbjct: 165 VV-----------------TLWYRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFP 206
Query: 292 CNNNV 296
++ +
Sbjct: 207 GDSEI 211
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 30/185 (16%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + +N + +V E L L F + S L G+ + L+
Sbjct: 63 LKELNHPNIVKLLDVI-HTENKLYLVFEFLHQD----LKKFMDASA----LTGIPLPLI- 112
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K L Q+ + L F HS+ R++HR + P+N+LI + GA KL FG A + + ++
Sbjct: 113 -KSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 170
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
+L Y APE++ + + DI+S GC+ ++ R+ LF
Sbjct: 171 VV-----------------TLWYRAPEILLG-XKYYSTAVDIWSLGCIFAEMVTRRALFP 212
Query: 292 CNNNV 296
++ +
Sbjct: 213 GDSEI 217
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 30/185 (16%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + +N + +V E L L F + S L G+ + L+
Sbjct: 56 LKELNHPNIVKLLDVI-HTENKLYLVFEFLHQD----LKKFMDASA----LTGIPLPLI- 105
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K L Q+ + L F HS+ R++HR + P+N+LI + GA KL FG A + + ++
Sbjct: 106 -KSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 163
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
+L Y APE++ + + DI+S GC+ ++ R+ LF
Sbjct: 164 VV-----------------TLWYRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFP 205
Query: 292 CNNNV 296
++ +
Sbjct: 206 GDSEI 210
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 30/185 (16%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + +N + +V E L L F + S L G+ + L+
Sbjct: 55 LKELNHPNIVKLLDVI-HTENKLYLVFEFLHQD----LKKFMDASA----LTGIPLPLI- 104
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K L Q+ + L F HS+ R++HR + P+N+LI + GA KL FG A + + ++
Sbjct: 105 -KSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 162
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
+L Y APE++ + + DI+S GC+ ++ R+ LF
Sbjct: 163 VV-----------------TLWYRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFP 204
Query: 292 CNNNV 296
++ +
Sbjct: 205 GDSEI 209
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 30/185 (16%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + +N + +V E L L F + S L G+ + L+
Sbjct: 63 LKELNHPNIVKLLDVI-HTENKLYLVFEFLHQD----LKKFMDASA----LTGIPLPLI- 112
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K L Q+ + L F HS+ R++HR + P+N+LI + GA KL FG A + + ++
Sbjct: 113 -KSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 170
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
+L Y APE++ + + DI+S GC+ ++ R+ LF
Sbjct: 171 VV-----------------TLWYRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFP 212
Query: 292 CNNNV 296
++ +
Sbjct: 213 GDSEI 217
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 125/302 (41%), Gaps = 60/302 (19%)
Query: 35 ALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLT 94
AL+D+E+ +G G +Y AR + Q+++ ++ + VL K L +A L
Sbjct: 32 ALEDFEIGRPLGKGKFG---NVYLAREK-----QSKF-ILALKVLFKAQLEKAGVEHQLR 82
Query: 95 KSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFEN 154
+ E LRHP I+ + + ++ +A + V +
Sbjct: 83 REVEIQ------------SHLRHPNILRLYGYFHDATRVYLILE---YAPLGTVYRELQK 127
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
+SK + ++ ++A +L + HS R+IHR I PEN+L+ S G K+
Sbjct: 128 LSKFDEQRTATYIT---------ELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIAD 177
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIF 274
FG+++ + D L +L+Y PE++ + + D++
Sbjct: 178 FGWSVHAPSSRRDD-------------------LCGTLDYLPPEMIEGRMHDEKV--DLW 216
Query: 275 SFGCVAYHLIARKPLFDCNNNVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLSANESF 332
S G + Y + KP F+ N + Y ++ + + D + DL+ ++L N S
Sbjct: 217 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQ 273
Query: 333 RP 334
RP
Sbjct: 274 RP 275
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 30/185 (16%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + +N + +V E L L F + S L G+ + L+
Sbjct: 59 LKELNHPNIVKLLDVI-HTENKLYLVFEFLHQD----LKKFMDASA----LTGIPLPLI- 108
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K L Q+ + L F HS+ R++HR + P+N+LI + GA KL FG A + V
Sbjct: 109 -KSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGV 158
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
Y V +L Y APE++ + + DI+S GC+ ++ R+ LF
Sbjct: 159 PVRTYXHEVV---------TLWYRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFP 208
Query: 292 CNNNV 296
++ +
Sbjct: 209 GDSEI 213
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 30/185 (16%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + +N + +V E L L F + S L G+ + L+
Sbjct: 58 LKELNHPNIVKLLDVI-HTENKLYLVFEFLHQD----LKKFMDASA----LTGIPLPLI- 107
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K L Q+ + L F HS+ R++HR + P+N+LI + GA KL FG A + V
Sbjct: 108 -KSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGV 157
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
Y V +L Y APE++ + + DI+S GC+ ++ R+ LF
Sbjct: 158 PVRTYXHEVV---------TLWYRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFP 207
Query: 292 CNNNV 296
++ +
Sbjct: 208 GDSEI 212
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 30/185 (16%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + +N + +V E L L F + S L G+ + L+
Sbjct: 56 LKELNHPNIVKLLDVI-HTENKLYLVFEFLHQD----LKKFMDASA----LTGIPLPLI- 105
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K L Q+ + L F HS+ R++HR + P+N+LI + GA KL FG A + V
Sbjct: 106 -KSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGV 155
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
Y V +L Y APE++ + + DI+S GC+ ++ R+ LF
Sbjct: 156 PVRTYXHEVV---------TLWYRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFP 205
Query: 292 CNNNV 296
++ +
Sbjct: 206 GDSEI 210
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 30/185 (16%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + +N + +V E L L F + S L G+ + L+
Sbjct: 56 LKELNHPNIVKLLDVI-HTENKLYLVFEFLHQD----LKKFMDASA----LTGIPLPLI- 105
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K L Q+ + L F HS+ R++HR + P+N+LI + GA KL FG A + V
Sbjct: 106 -KSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGV 155
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
Y V +L Y APE++ + + DI+S GC+ ++ R+ LF
Sbjct: 156 PVRTYXHEVV---------TLWYRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFP 205
Query: 292 CNNNV 296
++ +
Sbjct: 206 GDSEI 210
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 30/185 (16%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + +N + +V E L L F + S L G+ + L+
Sbjct: 57 LKELNHPNIVKLLDVI-HTENKLYLVFEFLHQD----LKKFMDASA----LTGIPLPLI- 106
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K L Q+ + L F HS+ R++HR + P+N+LI + GA KL FG A + V
Sbjct: 107 -KSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGV 156
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
Y V +L Y APE++ + + DI+S GC+ ++ R+ LF
Sbjct: 157 PVRTYXHEVV---------TLWYRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFP 206
Query: 292 CNNNV 296
++ +
Sbjct: 207 GDSEI 211
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 30/185 (16%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + +N + +V E L L F + S L G+ + L+
Sbjct: 55 LKELNHPNIVKLLDVI-HTENKLYLVFEFLHQD----LKKFMDASA----LTGIPLPLI- 104
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K L Q+ + L F HS+ R++HR + P+N+LI + GA KL FG A + V
Sbjct: 105 -KSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGV 154
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
Y V +L Y APE++ + + DI+S GC+ ++ R+ LF
Sbjct: 155 PVRTYXHEVV---------TLWYRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFP 204
Query: 292 CNNNV 296
++ +
Sbjct: 205 GDSEI 209
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 30/185 (16%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + +N + +V E L L F + S L G+ + L+
Sbjct: 56 LKELNHPNIVKLLDVI-HTENKLYLVFEFLHQD----LKKFMDASA----LTGIPLPLI- 105
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K L Q+ + L F HS+ R++HR + P+N+LI + GA KL FG A + V
Sbjct: 106 -KSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGV 155
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
Y V +L Y APE++ + + DI+S GC+ ++ R+ LF
Sbjct: 156 PVRTYXHEVV---------TLWYRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFP 205
Query: 292 CNNNV 296
++ +
Sbjct: 206 GDSEI 210
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 30/185 (16%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + +N + +V E L L F + S L G+ + L+
Sbjct: 58 LKELNHPNIVKLLDVI-HTENKLYLVFEFLHQD----LKKFMDASA----LTGIPLPLI- 107
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K L Q+ + L F HS+ R++HR + P+N+LI + GA KL FG A + V
Sbjct: 108 -KSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGV 157
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
Y V +L Y APE++ + + DI+S GC+ ++ R+ LF
Sbjct: 158 PVRTYXHEVV---------TLWYRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFP 207
Query: 292 CNNNV 296
++ +
Sbjct: 208 GDSEI 212
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 30/185 (16%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + +N + +V E L L F + S L G+ + L+
Sbjct: 60 LKELNHPNIVKLLDVI-HTENKLYLVFEFLHQD----LKKFMDASA----LTGIPLPLI- 109
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K L Q+ + L F HS+ R++HR + P+N+LI + GA KL FG A + V
Sbjct: 110 -KSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGV 159
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
Y V +L Y APE++ + + DI+S GC+ ++ R+ LF
Sbjct: 160 PVRTYXHEVV---------TLWYRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFP 209
Query: 292 CNNNV 296
++ +
Sbjct: 210 GDSEI 214
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 30/185 (16%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + +N + +V E L L F + S L G+ + L+
Sbjct: 55 LKELNHPNIVKLLDVI-HTENKLYLVFEFLHQD----LKKFMDASA----LTGIPLPLI- 104
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K L Q+ + L F HS+ R++HR + P+N+LI + GA KL FG A + V
Sbjct: 105 -KSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGV 154
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
Y V +L Y APE++ + + DI+S GC+ ++ R+ LF
Sbjct: 155 PVRTYXHEVV---------TLWYRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFP 204
Query: 292 CNNNV 296
++ +
Sbjct: 205 GDSEI 209
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 30/185 (16%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + +N + +V E L L F + S L G+ + L+
Sbjct: 56 LKELNHPNIVKLLDVI-HTENKLYLVFEFLHQD----LKKFMDASA----LTGIPLPLI- 105
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K L Q+ + L F HS+ R++HR + P+N+LI + GA KL FG A + V
Sbjct: 106 -KSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGV 155
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
Y V +L Y APE++ + + DI+S GC+ ++ R+ LF
Sbjct: 156 PVRTYXHEVV---------TLWYRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFP 205
Query: 292 CNNNV 296
++ +
Sbjct: 206 GDSEI 210
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 40/221 (18%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L +LRH +V++++ + K +V E + ++ + L F N GL+ +++
Sbjct: 78 LKQLRHENLVNLLEVC-KKKKRWYLVFEFVDHTILDDLELFPN---------GLDYQVVQ 127
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
L QI + F HS+ +IHR I PENIL++ +G KL FGFA + ++ V
Sbjct: 128 KY--LFQIINGIGFCHSH-NIIHRDIKPENILVSQSGVVKLCDFGFA----RTLAAPGEV 180
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
YD E + + Y APEL+ +G + D+++ GC+ + +PLF
Sbjct: 181 -------YDDEVA------TRWYRAPELLVGDV-KYGKAVDVWAIGCLVTEMFMGEPLFP 226
Query: 292 CNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESF 332
++++ + + L + L+P Q++ + N F
Sbjct: 227 GDSDIDQLYHIMMCLGN---------LIPRHQELFNKNPVF 258
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 30/185 (16%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + +N + +V E L L F + S L G+ + L+
Sbjct: 57 LKELNHPNIVKLLDVI-HTENKLYLVFEFLHQD----LKKFMDASA----LTGIPLPLI- 106
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K L Q+ + L F HS+ R++HR + P+N+LI + GA KL FG A + V
Sbjct: 107 -KSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGV 156
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
Y V +L Y APE++ + + DI+S GC+ ++ R+ LF
Sbjct: 157 PVRTYXHEVV---------TLWYRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFP 206
Query: 292 CNNNV 296
++ +
Sbjct: 207 GDSEI 211
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 129/299 (43%), Gaps = 66/299 (22%)
Query: 36 LQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLTK 95
++ YE + +IG G+ +K R RD + A +
Sbjct: 2 MEKYEKIGKIGEGSYGVVFK---CRNRDT--------------------GQIVAIKKFLE 38
Query: 96 SAEDAFLDLVRADAGKLVR-LRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFEN 154
S +D + + ++++ L+HP +V++++ K + +V E +V + L ++
Sbjct: 39 SEDDPVIKKIALREIRMLKQLKHPNLVNLLEVF-RRKRRLHLVFEYCDHTVLHELDRYQR 97
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
VP L +K Q +++ F H + IHR + PENILIT + KL
Sbjct: 98 --GVPEHL---------VKSITWQTLQAVNFCHKH-NCIHRDVKPENILITKHSVIKLCD 145
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIF 274
FGFA + ++ S+ YD E + + Y +PEL+ T +G D++
Sbjct: 146 FGFA----RLLTGPSDY-------YDDEVA------TRWYRSPELLVGDT-QYGPPVDVW 187
Query: 275 SFGCVAYHLIARKPLFDCNNNV-KMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESF 332
+ GCV L++ PL+ ++V ++Y+ T DL+P Q++ S N+ F
Sbjct: 188 AIGCVFAELLSGVPLWPGKSDVDQLYLIRKTL----------GDLIPRHQQVFSTNQYF 236
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 128/307 (41%), Gaps = 62/307 (20%)
Query: 32 GPK--ALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARA 89
GP+ AL+D+E+ +G G +Y AR + Q+++ ++ + VL K L +A
Sbjct: 1 GPRQWALEDFEIGRPLGKGKFG---NVYLAREK-----QSKF-ILALKVLFKAQLEKAGV 51
Query: 90 RAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVL 149
L + E LRHP I+ + + ++ +A + V
Sbjct: 52 EHQLRREVEIQ------------SHLRHPNILRLYGYFHDATRVYLILE---YAPLGTVY 96
Query: 150 GNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGA 209
+ +SK + ++ ++A +L + HS R+IHR I PEN+L+ S G
Sbjct: 97 RELQKLSKFDEQRTATYIT---------ELANALSYCHSK-RVIHRDIKPENLLLGSAGE 146
Query: 210 WKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC 269
K+ FG+++ + + L +L+Y PE++ + +
Sbjct: 147 LKIADFGWSVHAPSSRRTT-------------------LCGTLDYLPPEMIEGRMHD--E 185
Query: 270 SSDIFSFGCVAYHLIARKPLFDCNNNVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLS 327
D++S G + Y + KP F+ N + Y ++ + + D + DL+ ++L
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI---SRLLK 242
Query: 328 ANESFRP 334
N S RP
Sbjct: 243 HNPSQRP 249
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 127/307 (41%), Gaps = 62/307 (20%)
Query: 32 GPK--ALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARA 89
GP+ AL+D+E+ +G G +Y AR + Q+++ ++ + VL K L +A
Sbjct: 1 GPRQWALEDFEIGRPLGKGKFG---NVYLAREK-----QSKF-ILALKVLFKAQLEKAGV 51
Query: 90 RAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVL 149
L + E LRHP I+ + + ++ +A + V
Sbjct: 52 EHQLRREVEIQ------------SHLRHPNILRLYGYFHDATRVYLILE---YAPLGTVY 96
Query: 150 GNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGA 209
+ +SK + ++ ++A +L + HS R+IHR I PEN+L+ S G
Sbjct: 97 RELQKLSKFDEQRTATYIT---------ELANALSYCHSK-RVIHRDIKPENLLLGSAGE 146
Query: 210 WKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC 269
K+ FG+++ + L +L+Y PE++ + +
Sbjct: 147 LKIADFGWSVHAPSSRRTE-------------------LCGTLDYLPPEMIEGRMHD--E 185
Query: 270 SSDIFSFGCVAYHLIARKPLFDCNNNVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLS 327
D++S G + Y + KP F+ N + Y ++ + + D + DL+ ++L
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI---SRLLK 242
Query: 328 ANESFRP 334
N S RP
Sbjct: 243 HNPSQRP 249
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 127/302 (42%), Gaps = 60/302 (19%)
Query: 35 ALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLT 94
AL+D+E+ +G G +Y AR + Q+++ ++ + VL K L +A L
Sbjct: 6 ALEDFEIGRPLGKGKFG---NVYLAREK-----QSKF-ILALKVLFKAQLEKAGVEHQLR 56
Query: 95 KSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFEN 154
+ E LRHP I+ + + ++ +A + V +
Sbjct: 57 REVEIQ------------SHLRHPNILRLYGYFHDATRVYLILE---YAPLGTVYRELQK 101
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
+SK + ++ ++A +L + HS R+IHR I PEN+L+ S G K+
Sbjct: 102 LSKFDEQRTATYIT---------ELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIAD 151
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIF 274
FG+++ + SS A L +L+Y PE++ + + D++
Sbjct: 152 FGWSVH-----APSSRRAA--------------LCGTLDYLPPEMIEGRMHD--EKVDLW 190
Query: 275 SFGCVAYHLIARKPLFDCNNNVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLSANESF 332
S G + Y + KP F+ N + Y ++ + + D + DL+ ++L N S
Sbjct: 191 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQ 247
Query: 333 RP 334
RP
Sbjct: 248 RP 249
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 125/302 (41%), Gaps = 60/302 (19%)
Query: 35 ALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLT 94
AL+D+E+ +G G +Y AR + Q+++ ++ + VL K L +A L
Sbjct: 5 ALEDFEIGRPLGKGKFG---NVYLAREK-----QSKF-ILALKVLFKAQLEKAGVEHQLR 55
Query: 95 KSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFEN 154
+ E LRHP I+ + + ++ +A + V +
Sbjct: 56 REVEIQ------------SHLRHPNILRLYGYFHDATRVYLILE---YAPLGTVYRELQK 100
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
+SK + ++ ++A +L + HS R+IHR I PEN+L+ S G K+
Sbjct: 101 LSKFDEQRTATYIT---------ELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIAD 150
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIF 274
FG+++ + + L +L+Y PE++ + + D++
Sbjct: 151 FGWSVHAPSSRRTT-------------------LCGTLDYLPPEMIEGRMHD--EKVDLW 189
Query: 275 SFGCVAYHLIARKPLFDCNNNVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLSANESF 332
S G + Y + KP F+ N + Y ++ + + D + DL+ ++L N S
Sbjct: 190 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQ 246
Query: 333 RP 334
RP
Sbjct: 247 RP 248
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 125/302 (41%), Gaps = 60/302 (19%)
Query: 35 ALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLT 94
AL+D+E+ +G G +Y AR + Q+++ ++ + VL K L +A L
Sbjct: 9 ALEDFEIGRPLGKGKFG---NVYLAREK-----QSKF-ILALKVLFKAQLEKAGVEHQLR 59
Query: 95 KSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFEN 154
+ E LRHP I+ + + ++ +A + V +
Sbjct: 60 REVEIQ------------SHLRHPNILRLYGYFHDATRVYLILE---YAPLGTVYRELQK 104
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
+SK + ++ ++A +L + HS R+IHR I PEN+L+ S G K+
Sbjct: 105 LSKFDEQRTATYIT---------ELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIAN 154
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIF 274
FG+++ + + L +L+Y PE++ + + D++
Sbjct: 155 FGWSVHAPSSRRTT-------------------LCGTLDYLPPEMIEGRMHD--EKVDLW 193
Query: 275 SFGCVAYHLIARKPLFDCNNNVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLSANESF 332
S G + Y + KP F+ N + Y ++ + + D + DL+ ++L N S
Sbjct: 194 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQ 250
Query: 333 RP 334
RP
Sbjct: 251 RP 252
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 125/302 (41%), Gaps = 60/302 (19%)
Query: 35 ALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLT 94
AL+D+E+ +G G +Y AR + Q+++ ++ + VL K L +A L
Sbjct: 32 ALEDFEIGRPLGKGKFG---NVYLAREK-----QSKF-ILALKVLFKAQLEKAGVEHQLR 82
Query: 95 KSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFEN 154
+ E LRHP I+ + + ++ +A + V +
Sbjct: 83 REVEIQ------------SHLRHPNILRLYGYFHDATRVYLILE---YAPLGTVYRELQK 127
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
+SK + ++ ++A +L + HS R+IHR I PEN+L+ S G K+
Sbjct: 128 LSKFDEQRTATYIT---------ELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIAD 177
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIF 274
FG+++ + + L +L+Y PE++ + + D++
Sbjct: 178 FGWSVHAPSSRRTT-------------------LCGTLDYLPPEMIEGRMHDEKV--DLW 216
Query: 275 SFGCVAYHLIARKPLFDCNNNVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLSANESF 332
S G + Y + KP F+ N + Y ++ + + D + DL+ ++L N S
Sbjct: 217 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQ 273
Query: 333 RP 334
RP
Sbjct: 274 RP 275
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 125/302 (41%), Gaps = 60/302 (19%)
Query: 35 ALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLT 94
AL+D+E+ +G G +Y AR + Q+++ ++ + VL K L +A L
Sbjct: 9 ALEDFEIGRPLGKGKFG---NVYLAREK-----QSKF-ILALKVLFKAQLEKAGVEHQLR 59
Query: 95 KSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFEN 154
+ E LRHP I+ + + ++ +A + V +
Sbjct: 60 REVEIQ------------SHLRHPNILRLYGYFHDATRVYLILE---YAPLGTVYRELQK 104
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
+SK + ++ ++A +L + HS R+IHR I PEN+L+ S G K+
Sbjct: 105 LSKFDEQRTATYIT---------ELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIAD 154
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIF 274
FG+++ + + L +L+Y PE++ + + D++
Sbjct: 155 FGWSVHAPSSRRTT-------------------LCGTLDYLPPEMIEGRMHD--EKVDLW 193
Query: 275 SFGCVAYHLIARKPLFDCNNNVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLSANESF 332
S G + Y + KP F+ N + Y ++ + + D + DL+ ++L N S
Sbjct: 194 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQ 250
Query: 333 RP 334
RP
Sbjct: 251 RP 252
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 125/302 (41%), Gaps = 60/302 (19%)
Query: 35 ALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLT 94
AL+D+E+ +G G +Y AR + Q+++ ++ + VL K L +A L
Sbjct: 10 ALEDFEIGRPLGKGKFG---NVYLAREK-----QSKF-ILALKVLFKAQLEKAGVEHQLR 60
Query: 95 KSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFEN 154
+ E LRHP I+ + + ++ +A + V +
Sbjct: 61 REVEIQ------------SHLRHPNILRLYGYFHDATRVYLILE---YAPLGTVYRELQK 105
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
+SK + ++ ++A +L + HS R+IHR I PEN+L+ S G K+
Sbjct: 106 LSKFDEQRTATYIT---------ELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIAD 155
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIF 274
FG+++ + + L +L+Y PE++ + + D++
Sbjct: 156 FGWSVHAPSSRRTT-------------------LCGTLDYLPPEMIEGRMHD--EKVDLW 194
Query: 275 SFGCVAYHLIARKPLFDCNNNVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLSANESF 332
S G + Y + KP F+ N + Y ++ + + D + DL+ ++L N S
Sbjct: 195 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQ 251
Query: 333 RP 334
RP
Sbjct: 252 RP 253
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 125/302 (41%), Gaps = 60/302 (19%)
Query: 35 ALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLT 94
AL+D+E+ +G G +Y AR + Q+++ ++ + VL K L +A L
Sbjct: 8 ALEDFEIGRPLGKGKFG---NVYLAREK-----QSKF-ILALKVLFKAQLEKAGVEHQLR 58
Query: 95 KSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFEN 154
+ E LRHP I+ + + ++ +A + V +
Sbjct: 59 REVEIQ------------SHLRHPNILRLYGYFHDATRVYLILE---YAPLGTVYRELQK 103
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
+SK + ++ ++A +L + HS R+IHR I PEN+L+ S G K+
Sbjct: 104 LSKFDEQRTATYIT---------ELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIAN 153
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIF 274
FG+++ + + L +L+Y PE++ + + D++
Sbjct: 154 FGWSVHAPSSRRTT-------------------LCGTLDYLPPEMIEGRMHD--EKVDLW 192
Query: 275 SFGCVAYHLIARKPLFDCNNNVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLSANESF 332
S G + Y + KP F+ N + Y ++ + + D + DL+ ++L N S
Sbjct: 193 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQ 249
Query: 333 RP 334
RP
Sbjct: 250 RP 251
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 125/302 (41%), Gaps = 60/302 (19%)
Query: 35 ALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLT 94
AL+D+E+ +G G +Y AR + Q+++ ++ + VL K L +A L
Sbjct: 9 ALEDFEIGRPLGKGKFG---NVYLAREK-----QSKF-ILALKVLFKAQLEKAGVEHQLR 59
Query: 95 KSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFEN 154
+ E LRHP I+ + + ++ +A + V +
Sbjct: 60 REVEIQ------------SHLRHPNILRLYGYFHDATRVYLILE---YAPLGTVYRELQK 104
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
+SK + ++ ++A +L + HS R+IHR I PEN+L+ S G K+
Sbjct: 105 LSKFDEQRTATYIT---------ELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIAD 154
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIF 274
FG+++ + + L +L+Y PE++ + + D++
Sbjct: 155 FGWSVHAPSSRRTT-------------------LCGTLDYLPPEMIEGRMHD--EKVDLW 193
Query: 275 SFGCVAYHLIARKPLFDCNNNVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLSANESF 332
S G + Y + KP F+ N + Y ++ + + D + DL+ ++L N S
Sbjct: 194 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQ 250
Query: 333 RP 334
RP
Sbjct: 251 RP 252
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 124/302 (41%), Gaps = 60/302 (19%)
Query: 35 ALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLT 94
AL+D+E+ +G G +Y AR + Q+++ ++ + VL K L +A L
Sbjct: 6 ALEDFEIGRPLGKGKFG---NVYLAREK-----QSKF-ILALKVLFKAQLEKAGVEHQLR 56
Query: 95 KSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFEN 154
+ E LRHP I+ + + ++ +A + V +
Sbjct: 57 REVEIQ------------SHLRHPNILRLYGYFHDATRVYLILE---YAPLGTVYRELQK 101
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
+SK + ++ ++A +L + HS R+IHR I PEN+L+ S G K+
Sbjct: 102 LSKFDEQRTATYIT---------ELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIAD 151
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIF 274
FG+++ + L +L+Y PE++ + + D++
Sbjct: 152 FGWSVHAPSS-------------------RRXXLCGTLDYLPPEMIEGRMHD--EKVDLW 190
Query: 275 SFGCVAYHLIARKPLFDCNNNVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLSANESF 332
S G + Y + KP F+ N + Y ++ + + D + DL+ ++L N S
Sbjct: 191 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQ 247
Query: 333 RP 334
RP
Sbjct: 248 RP 249
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 124/302 (41%), Gaps = 60/302 (19%)
Query: 35 ALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLT 94
AL+D+E+ +G G +Y AR + Q+++ ++ + VL K L +A L
Sbjct: 9 ALEDFEIGRPLGKGKFG---NVYLAREK-----QSKF-ILALKVLFKAQLEKAGVEHQLR 59
Query: 95 KSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFEN 154
+ E LRHP I+ + + ++ +A + V +
Sbjct: 60 REVEIQ------------SHLRHPNILRLYGYFHDATRVYLILE---YAPLGTVYRELQK 104
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
+SK + ++ ++A +L + HS R+IHR I PEN+L+ S G K+
Sbjct: 105 LSKFDEQRTATYIT---------ELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIAD 154
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIF 274
FG+++ + L +L+Y PE++ + + D++
Sbjct: 155 FGWSVHAPSS-------------------RRXXLCGTLDYLPPEMIEGRMHD--EKVDLW 193
Query: 275 SFGCVAYHLIARKPLFDCNNNVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLSANESF 332
S G + Y + KP F+ N + Y ++ + + D + DL+ ++L N S
Sbjct: 194 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQ 250
Query: 333 RP 334
RP
Sbjct: 251 RP 252
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 125/302 (41%), Gaps = 60/302 (19%)
Query: 35 ALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLT 94
AL+D+E+ +G G +Y AR + Q+++ ++ + VL K L +A L
Sbjct: 23 ALEDFEIGRPLGKGKFG---NVYLAREK-----QSKF-ILALKVLFKAQLEKAGVEHQLR 73
Query: 95 KSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFEN 154
+ E LRHP I+ + + ++ +A + V +
Sbjct: 74 REVEIQ------------SHLRHPNILRLYGYFHDATRVYLILE---YAPLGTVYRELQK 118
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
+SK + ++ ++A +L + HS R+IHR I PEN+L+ S G K+
Sbjct: 119 LSKFDEQRTATYIT---------ELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIAD 168
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIF 274
FG+++ + + L +L+Y PE++ + + D++
Sbjct: 169 FGWSVHAPSSRRTT-------------------LCGTLDYLPPEMIEGRMHDEKV--DLW 207
Query: 275 SFGCVAYHLIARKPLFDCNNNVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLSANESF 332
S G + Y + KP F+ N + Y ++ + + D + DL+ ++L N S
Sbjct: 208 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQ 264
Query: 333 RP 334
RP
Sbjct: 265 RP 266
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 124/302 (41%), Gaps = 60/302 (19%)
Query: 35 ALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLT 94
AL+D+E+ +G G +Y AR + Q+++ ++ + VL K L +A L
Sbjct: 6 ALEDFEIGRPLGKGKFG---NVYLAREK-----QSKF-ILALKVLFKAQLEKAGVEHQLR 56
Query: 95 KSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFEN 154
+ E LRHP I+ + + ++ +A + V +
Sbjct: 57 REVEIQ------------SHLRHPNILRLYGYFHDATRVYLILE---YAPLGTVYRELQK 101
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
+SK + ++ ++A +L + HS R+IHR I PEN+L+ S G K+
Sbjct: 102 LSKFDEQRTATYIT---------ELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIAD 151
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIF 274
FG+++ + L +L+Y PE++ + + D++
Sbjct: 152 FGWSVHAPSSRRTX-------------------LCGTLDYLPPEMIEGRMHD--EKVDLW 190
Query: 275 SFGCVAYHLIARKPLFDCNNNVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLSANESF 332
S G + Y + KP F+ N + Y ++ + + D + DL+ ++L N S
Sbjct: 191 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQ 247
Query: 333 RP 334
RP
Sbjct: 248 RP 249
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 127/302 (42%), Gaps = 60/302 (19%)
Query: 35 ALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLT 94
AL+D+E+ +G G +Y AR + Q+++ ++ + VL K L +A L
Sbjct: 9 ALEDFEIGRPLGKGKFG---NVYLAREK-----QSKF-ILALKVLFKAQLEKAGVEHQLR 59
Query: 95 KSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFEN 154
+ E LRHP I+ + + ++ +A + V +
Sbjct: 60 REVEIQ------------SHLRHPNILRLYGYFHDATRVYLILE---YAPLGTVYRELQK 104
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
+SK + ++ ++A +L + HS R+IHR I PEN+L+ S G K+
Sbjct: 105 LSKFDEQRTATYIT---------ELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIAD 154
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIF 274
FG+++ + SS A L +L+Y PE++ + + D++
Sbjct: 155 FGWSVH-----APSSRRAA--------------LCGTLDYLPPEMIEGRMHD--EKVDLW 193
Query: 275 SFGCVAYHLIARKPLFDCNNNVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLSANESF 332
S G + Y + KP F+ N + Y ++ + + D + DL+ ++L N S
Sbjct: 194 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQ 250
Query: 333 RP 334
RP
Sbjct: 251 RP 252
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 125/302 (41%), Gaps = 60/302 (19%)
Query: 35 ALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLT 94
AL+D+E+ +G G +Y AR + Q+++ ++ + VL K L +A L
Sbjct: 11 ALEDFEIGRPLGKGKFG---NVYLAREK-----QSKF-ILALKVLFKAQLEKAGVEHQLR 61
Query: 95 KSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFEN 154
+ E LRHP I+ + + ++ +A + V +
Sbjct: 62 REVEIQ------------SHLRHPNILRLYGYFHDATRVYLILE---YAPLGTVYRELQK 106
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
+SK + ++ ++A +L + HS R+IHR I PEN+L+ S G K+
Sbjct: 107 LSKFDEQRTATYIT---------ELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIAD 156
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIF 274
FG+++ + + L +L+Y PE++ + + D++
Sbjct: 157 FGWSVHAPSSRRTT-------------------LCGTLDYLPPEMIEGRMHD--EKVDLW 195
Query: 275 SFGCVAYHLIARKPLFDCNNNVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLSANESF 332
S G + Y + KP F+ N + Y ++ + + D + DL+ ++L N S
Sbjct: 196 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQ 252
Query: 333 RP 334
RP
Sbjct: 253 RP 254
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 124/302 (41%), Gaps = 60/302 (19%)
Query: 35 ALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLT 94
AL+D+E+ +G G +Y AR + Q ++ ++ + VL K L +A L
Sbjct: 3 ALEDFEIGRPLGKGKFG---NVYLAREK-----QRKF-ILALKVLFKAQLEKAGVEHQLR 53
Query: 95 KSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFEN 154
+ E LRHP I+ + + ++ +A + V +
Sbjct: 54 REVEIQ------------SHLRHPNILRLYGYFHDATRVYLILE---YAPLGTVYRELQK 98
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
+SK + ++ ++A +L + HS R+IHR I PEN+L+ S G K+
Sbjct: 99 LSKFDEQRTATYIT---------ELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIAD 148
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIF 274
FG+++ + + L +L+Y PE++ + + D++
Sbjct: 149 FGWSVHAPSSRRTT-------------------LCGTLDYLPPEMIEGRMHD--EKVDLW 187
Query: 275 SFGCVAYHLIARKPLFDCNNNVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLSANESF 332
S G + Y + KP F+ N + Y ++ + + D + DL+ ++L N S
Sbjct: 188 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQ 244
Query: 333 RP 334
RP
Sbjct: 245 RP 246
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 15/130 (11%)
Query: 167 MSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS 226
++L +++ L Q+ L+++HS A++IHR + P N+L+ N K+G FG A + +
Sbjct: 155 LTLEHVRYFLYQLLRGLKYMHS-AQVIHRDLKPSNLLVNENCELKIGDFGMA----RGLC 209
Query: 227 DSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIAR 286
S + EY + Y APEL+ S + + + D++S GC+ ++AR
Sbjct: 210 TSPAEHQYFMTEYVA---------TRWYRAPELMLS-LHEYTQAIDLWSVGCIFGEMLAR 259
Query: 287 KPLFDCNNNV 296
+ LF N V
Sbjct: 260 RQLFPGKNYV 269
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 15/130 (11%)
Query: 167 MSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS 226
++L +++ L Q+ L+++HS A++IHR + P N+L+ N K+G FG A + +
Sbjct: 156 LTLEHVRYFLYQLLRGLKYMHS-AQVIHRDLKPSNLLVNENCELKIGDFGMA----RGLC 210
Query: 227 DSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIAR 286
S + EY + Y APEL+ S + + + D++S GC+ ++AR
Sbjct: 211 TSPAEHQYFMTEYVA---------TRWYRAPELMLS-LHEYTQAIDLWSVGCIFGEMLAR 260
Query: 287 KPLFDCNNNV 296
+ LF N V
Sbjct: 261 RQLFPGKNYV 270
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 124/302 (41%), Gaps = 60/302 (19%)
Query: 35 ALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLT 94
AL+D+E+ +G G +Y AR + Q+++ ++ + VL K L +A L
Sbjct: 6 ALEDFEIGRPLGKGKFG---NVYLAREK-----QSKF-ILALKVLFKAQLEKAGVEHQLR 56
Query: 95 KSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFEN 154
+ E LRHP I+ + + ++ +A + V +
Sbjct: 57 REVEIQ------------SHLRHPNILRLYGYFHDATRVYLILE---YAPLGTVYRELQK 101
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
+SK + ++ ++A +L + HS R+IHR I PEN+L+ S G K+
Sbjct: 102 LSKFDEQRTATYIT---------ELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIAD 151
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIF 274
FG+++ + L +L+Y PE++ + + D++
Sbjct: 152 FGWSVHAPSSRRTD-------------------LCGTLDYLPPEMIEGRMHD--EKVDLW 190
Query: 275 SFGCVAYHLIARKPLFDCNNNVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLSANESF 332
S G + Y + KP F+ N + Y ++ + + D + DL+ ++L N S
Sbjct: 191 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQ 247
Query: 333 RP 334
RP
Sbjct: 248 RP 249
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 124/302 (41%), Gaps = 60/302 (19%)
Query: 35 ALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLT 94
AL+D+E+ +G G +Y AR + Q+++ ++ + VL K L +A L
Sbjct: 7 ALEDFEIGRPLGKGKFG---NVYLAREK-----QSKF-ILALKVLFKAQLEKAGVEHQLR 57
Query: 95 KSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFEN 154
+ E LRHP I+ + + ++ +A + V +
Sbjct: 58 REVEIQ------------SHLRHPNILRLYGYFHDATRVYLILE---YAPLGTVYRELQK 102
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
+SK + ++ ++A +L + HS R+IHR I PEN+L+ S G K+
Sbjct: 103 LSKFDEQRTATYIT---------ELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIAD 152
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIF 274
FG+++ + L +L+Y PE++ + + D++
Sbjct: 153 FGWSVHAPSSRRTD-------------------LCGTLDYLPPEMIEGRMHD--EKVDLW 191
Query: 275 SFGCVAYHLIARKPLFDCNNNVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLSANESF 332
S G + Y + KP F+ N + Y ++ + + D + DL+ ++L N S
Sbjct: 192 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQ 248
Query: 333 RP 334
RP
Sbjct: 249 RP 250
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 124/302 (41%), Gaps = 60/302 (19%)
Query: 35 ALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLT 94
AL+D+E+ +G G +Y AR + Q+++ ++ + VL K L +A L
Sbjct: 6 ALEDFEIGRPLGKGKFG---NVYLAREK-----QSKF-ILALKVLFKAQLEKAGVEHQLR 56
Query: 95 KSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFEN 154
+ E LRHP I+ + + ++ +A + V +
Sbjct: 57 REVEIQ------------SHLRHPNILRLYGYFHDATRVYLILE---YAPLGTVYRELQK 101
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
+SK + ++ ++A +L + HS R+IHR I PEN+L+ S G K+
Sbjct: 102 LSKFDEQRTATYIT---------ELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIAD 151
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIF 274
FG+++ + L +L+Y PE++ + + D++
Sbjct: 152 FGWSVHAPSSRRTD-------------------LCGTLDYLPPEMIEGRMHD--EKVDLW 190
Query: 275 SFGCVAYHLIARKPLFDCNNNVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLSANESF 332
S G + Y + KP F+ N + Y ++ + + D + DL+ ++L N S
Sbjct: 191 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQ 247
Query: 333 RP 334
RP
Sbjct: 248 RP 249
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 124/302 (41%), Gaps = 60/302 (19%)
Query: 35 ALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLT 94
AL+D+E+ +G G +Y AR + Q+++ ++ + VL K L +A L
Sbjct: 8 ALEDFEIGRPLGKGKFG---NVYLAREK-----QSKF-ILALKVLFKAQLEKAGVEHQLR 58
Query: 95 KSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFEN 154
+ E LRHP I+ + + ++ +A + V +
Sbjct: 59 REVEIQ------------SHLRHPNILRLYGYFHDATRVYLILE---YAPLGTVYRELQK 103
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
+SK + ++ ++A +L + HS R+IHR I PEN+L+ S G K+
Sbjct: 104 LSKFDEQRTATYIT---------ELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIAD 153
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIF 274
FG+++ + L +L+Y PE++ + + D++
Sbjct: 154 FGWSVHAPSS-------------------RRXXLCGTLDYLPPEMIEGRMHD--EKVDLW 192
Query: 275 SFGCVAYHLIARKPLFDCNNNVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLSANESF 332
S G + Y + KP F+ N + Y ++ + + D + DL+ ++L N S
Sbjct: 193 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQ 249
Query: 333 RP 334
RP
Sbjct: 250 RP 251
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 124/302 (41%), Gaps = 60/302 (19%)
Query: 35 ALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLT 94
AL+D+E+ +G G +Y AR + Q+++ ++ + VL K L +A L
Sbjct: 7 ALEDFEIGRPLGKGKFG---NVYLAREK-----QSKF-ILALKVLFKAQLEKAGVEHQLR 57
Query: 95 KSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFEN 154
+ E LRHP I+ + + ++ +A + V +
Sbjct: 58 REVEIQ------------SHLRHPNILRLYGYFHDATRVYLILE---YAPLGTVYRELQK 102
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
+SK + ++ ++A +L + HS R+IHR I PEN+L+ S G K+
Sbjct: 103 LSKFDEQRTATYIT---------ELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIAD 152
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIF 274
FG++ + + L +L+Y PE++ + + D++
Sbjct: 153 FGWSCHAPSSRRTT-------------------LSGTLDYLPPEMIEGRMHD--EKVDLW 191
Query: 275 SFGCVAYHLIARKPLFDCNNNVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLSANESF 332
S G + Y + KP F+ N + Y ++ + + D + DL+ ++L N S
Sbjct: 192 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQ 248
Query: 333 RP 334
RP
Sbjct: 249 RP 250
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 123/302 (40%), Gaps = 60/302 (19%)
Query: 35 ALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLT 94
AL+D+E+ +G G +Y AR + Q+++ ++ + VL K L +A L
Sbjct: 11 ALEDFEIGRPLGKGKFG---NVYLAREK-----QSKF-ILALKVLFKAQLEKAGVEHQLR 61
Query: 95 KSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFEN 154
+ E LRHP I+ + + ++ +A V +
Sbjct: 62 REVEIQ------------SHLRHPNILRLYGYFHDATRVYLILE---YAPRGEVYKELQK 106
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
+SK + ++ ++A +L + HS R+IHR I PEN+L+ S G K+
Sbjct: 107 LSKFDEQRTATYIT---------ELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIAD 156
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIF 274
FG+++ + L +L+Y PE++ + + D++
Sbjct: 157 FGWSVHAPSS-------------------RRXXLXGTLDYLPPEMIEGRMHD--EKVDLW 195
Query: 275 SFGCVAYHLIARKPLFDCNNNVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLSANESF 332
S G + Y + KP F+ N + Y ++ + + D + DL+ ++L N S
Sbjct: 196 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQ 252
Query: 333 RP 334
RP
Sbjct: 253 RP 254
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 124/302 (41%), Gaps = 60/302 (19%)
Query: 35 ALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLT 94
AL+D+E+ +G G +Y AR + Q+++ ++ + VL K L +A L
Sbjct: 11 ALEDFEIGRPLGKGKFG---NVYLAREK-----QSKF-ILALKVLFKAQLEKAGVEHQLR 61
Query: 95 KSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFEN 154
+ E LRHP I+ + + ++ +A + V +
Sbjct: 62 REVEIQ------------SHLRHPNILRLYGYFHDATRVYLILE---YAPLGTVYRELQK 106
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
+SK + ++ ++A +L + HS R+IHR I PEN+L+ S G K+
Sbjct: 107 LSKFDEQRTATYIT---------ELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIAD 156
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIF 274
FG+++ + L +L+Y PE++ + + D++
Sbjct: 157 FGWSVHAPSSRRTD-------------------LCGTLDYLPPEMIEGRMHD--EKVDLW 195
Query: 275 SFGCVAYHLIARKPLFDCNNNVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLSANESF 332
S G + Y + KP F+ N + Y ++ + + D + DL+ ++L N S
Sbjct: 196 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQ 252
Query: 333 RP 334
RP
Sbjct: 253 RP 254
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 124/302 (41%), Gaps = 60/302 (19%)
Query: 35 ALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLT 94
AL+D+E+ +G G +Y AR + Q+++ ++ + VL K L +A L
Sbjct: 11 ALEDFEIGRPLGKGKFG---NVYLAREK-----QSKF-ILALKVLFKAQLEKAGVEHQLR 61
Query: 95 KSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFEN 154
+ E LRHP I+ + + ++ +A V +
Sbjct: 62 REVEIQ------------SHLRHPNILRLYGYFHDATRVYLILE---YAPRGEVYKELQK 106
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
+SK + ++ ++A +L + HS R+IHR I PEN+L+ S G K+
Sbjct: 107 LSKFDEQRTATYIT---------ELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIAD 156
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIF 274
FG+++ + + L +L+Y PE++ + + D++
Sbjct: 157 FGWSVHAPSSRRTT-------------------LCGTLDYLPPEMIEGRMHD--EKVDLW 195
Query: 275 SFGCVAYHLIARKPLFDCNNNVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLSANESF 332
S G + Y + KP F+ N + Y ++ + + D + DL+ ++L N S
Sbjct: 196 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQ 252
Query: 333 RP 334
RP
Sbjct: 253 RP 254
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 124/302 (41%), Gaps = 60/302 (19%)
Query: 35 ALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLT 94
AL+D+E+ +G G +Y AR + Q+++ ++ + VL K L +A L
Sbjct: 11 ALEDFEIGRPLGKGKFG---NVYLAREK-----QSKF-ILALKVLFKAQLEKAGVEHQLR 61
Query: 95 KSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFEN 154
+ E LRHP I+ + + ++ +A + V +
Sbjct: 62 REVEIQ------------SHLRHPNILRLYGYFHDATRVYLILE---YAPLGTVYRELQK 106
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
+SK + ++ ++A +L + HS R+IHR I PEN+L+ S G K+
Sbjct: 107 LSKFDEQRTATYIT---------ELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIAD 156
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIF 274
FG+++ + + L +L+Y PE + + + D++
Sbjct: 157 FGWSVHAPSSRRTT-------------------LCGTLDYLPPEXIEGRXHD--EKVDLW 195
Query: 275 SFGCVAYHLIARKPLFDCNNNVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLSANESF 332
S G + Y + KP F+ N + Y ++ + + D + DL+ ++L N S
Sbjct: 196 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQ 252
Query: 333 RP 334
RP
Sbjct: 253 RP 254
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 31/179 (17%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + ++ + +V E + + VL EN + GL+ S +
Sbjct: 73 LKELHHPNIVSLIDVI-HSERCLTLVFEFMEKDLKKVLD--ENKT-------GLQDS--Q 120
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
+K L Q+ + H + R++HR + P+N+LI S+GA KL FG A
Sbjct: 121 IKIYLYQLLRGVAHCHQH-RILHRDLKPQNLLINSDGALKLADFGLA------------- 166
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
+AF ++ +L Y AP+++ + + S DI+S GC+ +I KPLF
Sbjct: 167 RAFGIPVRSYTHEVV----TLWYRAPDVLMG-SKKYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 31/179 (17%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP IV ++ + ++ + +V E + + VL EN + GL+ S +
Sbjct: 73 LKELHHPNIVSLIDVI-HSERCLTLVFEFMEKDLKKVLD--ENKT-------GLQDS--Q 120
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
+K L Q+ + H + R++HR + P+N+LI S+GA KL FG A
Sbjct: 121 IKIYLYQLLRGVAHCHQH-RILHRDLKPQNLLINSDGALKLADFGLA------------- 166
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
+AF ++ +L Y AP+++ + + S DI+S GC+ +I KPLF
Sbjct: 167 RAFGIPVRSYTHEVV----TLWYRAPDVLMG-SKKYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 47/217 (21%)
Query: 112 LVRLRHPGIVHVVQAM--------------DENKNAMAMVTEPLFASVANVLGNFENVSK 157
L+R RH G + ++ + ++ + +++VT P + + + +
Sbjct: 24 LIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFM 83
Query: 158 VPRELKGLEM-SLLE---------MKHGLLQIAESLEFLHSNARLIHRAISPENILITSN 207
+ ++G E+ SLL K ++ +LE+LHS +I+R + PENIL+ N
Sbjct: 84 IMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKN 142
Query: 208 GAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSF 267
G K+ FGFA V D L + +Y APE+V +K +
Sbjct: 143 GHIKITDFGFAKY--------------------VPDVTYXLCGTPDYIAPEVVSTK--PY 180
Query: 268 GCSSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLT 304
S D +SFG + Y ++A F +N +K Y L
Sbjct: 181 NKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILN 217
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 96/222 (43%), Gaps = 39/222 (17%)
Query: 115 LRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKH 174
LRHP I+ + ++ ++ +A + V + +SK + ++
Sbjct: 65 LRHPNILRLYGYFHDSTRVYLILE---YAPLGTVYRELQKLSKFDEQRTATYIT------ 115
Query: 175 GLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAF 234
++A +L + HS ++IHR I PEN+L+ S G K+ FG+++ + SS A
Sbjct: 116 ---ELANALSYCHSK-KVIHRDIKPENLLLGSAGELKIADFGWSVH-----APSSRRAA- 165
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNN 294
L +L+Y PE++ + + D++S G + Y + KP F+ N
Sbjct: 166 -------------LCGTLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVGKPPFEANT 210
Query: 295 NVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRP 334
Y ++ + + D + DL+ ++L N S RP
Sbjct: 211 YQDTYKRISRVEFTFPDFVTEGARDLI---SRLLKHNPSQRP 249
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 24/161 (14%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + ++ H + R++HR I P+NILI SN K+ FG A +A+S++S Q H
Sbjct: 119 QILDGIKHAH-DMRIVHRDIKPQNILIDSNKTLKIFDFGIA----KALSETSLTQTNH-- 171
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
+ ++ Y +PE ++K + +DI+S G V Y ++ +P F+ V
Sbjct: 172 ----------VLGTVQYFSPE--QAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS 219
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMD 338
+ + + D+ ++ +D+ D+ + LS N R T D
Sbjct: 220 IAIKHI----QDSVPNVTTDVRKDIPQSLS-NVILRATEKD 255
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 95/223 (42%), Gaps = 39/223 (17%)
Query: 115 LRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKH 174
LRHP I+ + + ++ +A + V + +S+ + ++
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILE---YAPLGTVYRELQKLSRFDEQRTATYIT------ 119
Query: 175 GLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAF 234
++A +L + HS R+IHR I PEN+L+ SNG K+ FG+++ + D+
Sbjct: 120 ---ELANALSYCHSK-RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT------ 169
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNN 294
L +L+Y PE++ + + D++S G + Y + P F+ +
Sbjct: 170 -------------LCGTLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVGMPPFEAHT 214
Query: 295 NVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPT 335
+ Y ++ + + D + DL+ ++L N S R T
Sbjct: 215 YQETYRRISRVEFTFPDFVTEGARDLI---SRLLKHNASQRLT 254
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 20/179 (11%)
Query: 174 HGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQA 233
H +QIAE++EFLHS L+HR + P NI T + K+G FG + DQ + + +
Sbjct: 168 HIFIQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 226
Query: 234 F-HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDC 292
YA + + + Y +PE + N++ DIFS G + + L L+
Sbjct: 227 MPAYATHXGQVG------TKLYMSPEQIHG--NNYSHKVDIFSLGLILFEL-----LYSF 273
Query: 293 NNNVKMYMNTLTYLSSDAFSSIPSDLVPD----LQKMLSANESFRPTAMDFTGSRFFRD 347
+ ++ + +T + + F + + P +Q MLS + + RP A D + F +
Sbjct: 274 STQMER-VRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN 331
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 17/118 (14%)
Query: 181 ESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYD 240
++L F H N +IHR + P NILI++ A K+ FG A +AI+DS N A
Sbjct: 127 QALNFSHQNG-IIHRDVKPANILISATNAVKVVDFGIA----RAIADSGNSVXQTAA--- 178
Query: 241 VEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVKM 298
+ + Y +PE R +S SD++S GCV Y ++ +P F ++ V +
Sbjct: 179 -------VIGTAQYLSPEQARG--DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 227
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 38/213 (17%)
Query: 90 RAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVL 149
+AG T+ FL +AG + + H I+ + + + K M ++TE +
Sbjct: 82 KAGYTEKQRVDFL----GEAGIMGQFSHHNIIRLEGVISKYK-PMMIITEYM-------- 128
Query: 150 GNFEN--VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSN 207
EN + K RE G E S+L++ L IA +++L +N +HR ++ NIL+ SN
Sbjct: 129 ---ENGALDKFLREKDG-EFSVLQLVGMLRGIAAGMKYL-ANMNYVHRDLAARNILVNSN 183
Query: 208 GAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSF 267
K+ FG + + + D A Y +P++ +TAPE + + F
Sbjct: 184 LVCKVSDFGLS----RVLEDDPE------ATYTTSGGKIPIR----WTAPEAISYR--KF 227
Query: 268 GCSSDIFSFGCVAYHLI--ARKPLFDCNNNVKM 298
+SD++SFG V + ++ +P ++ +N+ M
Sbjct: 228 TSASDVWSFGIVMWEVMTYGERPYWELSNHEVM 260
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 44/204 (21%)
Query: 84 LSEARARAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFA 143
L +A+ARA K +DL++ +L HP ++ + E+ N + +V E
Sbjct: 70 LMDAKARADCIKE-----IDLLK-------QLNHPNVIKYYASFIED-NELNIVLE---- 112
Query: 144 SVANVLGNFENVSKVPRELKGLEMSLLE--MKHGLLQIAESLEFLHSNARLIHRAISPEN 201
L + ++S++ + K + + E + +Q+ +LE +HS R++HR I P N
Sbjct: 113 -----LADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR-RVMHRDIKPAN 166
Query: 202 ILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVR 261
+ IT+ G KLG G SS A H L + Y +PE R
Sbjct: 167 VFITATGVVKLGDLGLGRFF------SSKTTAAH-----------SLVGTPYYMSPE--R 207
Query: 262 SKTNSFGCSSDIFSFGCVAYHLIA 285
N + SDI+S GC+ Y + A
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAA 231
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 17/118 (14%)
Query: 181 ESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYD 240
++L F H N +IHR + P NI+I++ A K+ FG A +AI+DS N A
Sbjct: 127 QALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIA----RAIADSGNSVTQTAA--- 178
Query: 241 VEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVKM 298
+ + Y +PE R +S SD++S GCV Y ++ +P F ++ V +
Sbjct: 179 -------VIGTAQYLSPEQARG--DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 227
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 17/118 (14%)
Query: 181 ESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYD 240
++L F H N +IHR + P NI+I++ A K+ FG A +AI+DS N A
Sbjct: 127 QALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIA----RAIADSGNSVTQTAA--- 178
Query: 241 VEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVKM 298
+ + Y +PE R +S SD++S GCV Y ++ +P F ++ V +
Sbjct: 179 -------VIGTAQYLSPEQARG--DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 227
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 17/118 (14%)
Query: 181 ESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYD 240
++L F H N +IHR + P NI+I++ A K+ FG A +AI+DS N A
Sbjct: 127 QALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIA----RAIADSGNSVTQTAA--- 178
Query: 241 VEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVKM 298
+ + Y +PE R +S SD++S GCV Y ++ +P F ++ V +
Sbjct: 179 -------VIGTAQYLSPEQARG--DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 227
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 106/252 (42%), Gaps = 38/252 (15%)
Query: 153 ENVSKVPRELKGLE--MSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITS-NGA 209
E V + R L+ M +L +K + Q+ SL ++HS + HR I P+N+L+ +G
Sbjct: 122 ETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG-ICHRDIKPQNLLLDPPSGV 180
Query: 210 WKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC 269
KL FG S I+ NV S Y APEL+ TN +
Sbjct: 181 LKLIDFG---SAKILIAGEPNVSXIC---------------SRYYRAPELIFGATN-YTT 221
Query: 270 SSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSAN 329
+ DI+S GCV L+ +PLF + + + + L + + I K ++ N
Sbjct: 222 NIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQI---------KTMNPN 272
Query: 330 --ESFRPTAMDFTGSRFFRDDTRLRALRFLDHMLERDNMQKSEFLKALS----DMWKDFD 383
E P S+ FR T A+ + +LE + ++AL D + +
Sbjct: 273 YMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTGE 332
Query: 384 SRVLRYKVLPPL 395
+R+ + LPPL
Sbjct: 333 ARMPNGRELPPL 344
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 94/223 (42%), Gaps = 39/223 (17%)
Query: 115 LRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKH 174
LRHP I+ + + ++ +A + V + +S+ + ++
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILE---YAPLGTVYRELQKLSRFDEQRTATYIT------ 119
Query: 175 GLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAF 234
++A +L + HS R+IHR I PEN+L+ SNG K+ FG+++ + +
Sbjct: 120 ---ELANALSYCHSK-RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTT------ 169
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNN 294
L +L+Y PE++ + + D++S G + Y + P F+ +
Sbjct: 170 -------------LCGTLDYLPPEMIEGRMHD--EKVDLWSLGVLCYEFLVGMPPFEAHT 214
Query: 295 NVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPT 335
+ Y ++ + + D + DL+ ++L N S R T
Sbjct: 215 YQETYRRISRVEFTFPDFVTEGARDLI---SRLLKHNASQRLT 254
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 17/118 (14%)
Query: 181 ESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYD 240
++L F H N +IHR + P NI+I++ A K+ FG A +AI+DS N A
Sbjct: 144 QALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIA----RAIADSGNSVTQTAA--- 195
Query: 241 VEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVKM 298
+ + Y +PE R +S SD++S GCV Y ++ +P F ++ V +
Sbjct: 196 -------VIGTAQYLSPEQARG--DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 244
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 17/110 (15%)
Query: 181 ESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYD 240
++L F H N +IHR + P NI+I++ A K+ FG A +AI+DS N A
Sbjct: 127 QALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIA----RAIADSGNSVTQTAA--- 178
Query: 241 VEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
+ + Y +PE R +S SD++S GCV Y ++ +P F
Sbjct: 179 -------VIGTAQYLSPEQARG--DSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 126/280 (45%), Gaps = 56/280 (20%)
Query: 74 VCVWVLDKRALSEARARAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNA 133
V + +++K+ L+++ + + + E ++L L LRHP I+ + + ++K+
Sbjct: 32 VALKIINKKVLAKSDMQGRIER--EISYLRL----------LRHPHIIKLYDVI-KSKDE 78
Query: 134 MAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLI 193
+ MV E N L ++ V R+ +MS E + QI ++E+ H + +++
Sbjct: 79 IIMVIE----YAGNELFDY----IVQRD----KMSEQEARRFFQQIISAVEYCHRH-KIV 125
Query: 194 HRAISPENILITSNGAWKLGGFGFA-ISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSL 252
HR + PEN+L+ + K+ FG + I TD +S S
Sbjct: 126 HRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC-------------------GSP 166
Query: 253 NYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSSDAFS 312
NY APE++ K + G D++S G + Y ++ R+ FD + ++ N S+
Sbjct: 167 NYAAPEVISGKLYA-GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI-----SNGVY 220
Query: 313 SIPSDLVPD----LQKMLSANESFRPTAMDFTGSRFFRDD 348
++P L P +++ML N R + + +F+ D
Sbjct: 221 TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 260
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 100/218 (45%), Gaps = 43/218 (19%)
Query: 74 VCVWVLDKRALSEARARAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNA 133
V + ++DK+A+ +AG+ + V+ + +L+HP I+ + E+ N
Sbjct: 39 VAIKMIDKKAM----YKAGMVQR--------VQNEVKIHCQLKHPSILELYNYF-EDSNY 85
Query: 134 MAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLI 193
+ +V E + N E + +K + E +H + QI + +LHS+ ++
Sbjct: 86 VYLVLE--------MCHNGEMNRYLKNRVKPFSEN--EARHFMHQIITGMLYLHSHG-IL 134
Query: 194 HRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLN 253
HR ++ N+L+T N K+ FG A + ++ H Y L + N
Sbjct: 135 HRDLTLSNLLLTRNMNIKIADFGLA----------TQLKMPHEKHY-------TLCGTPN 177
Query: 254 YTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
Y +PE+ + ++ G SD++S GC+ Y L+ +P FD
Sbjct: 178 YISPEI--ATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 107/239 (44%), Gaps = 44/239 (18%)
Query: 115 LRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKH 174
LRHP I+ + + ++K+ + MV E N L ++ V R+ +MS E +
Sbjct: 65 LRHPHIIKLYDVI-KSKDEIIMVIE----YAGNELFDY----IVQRD----KMSEQEARR 111
Query: 175 GLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFA-ISTDQAISDSSNVQA 233
QI ++E+ H + +++HR + PEN+L+ + K+ FG + I TD +S
Sbjct: 112 FFQQIISAVEYCHRH-KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC--- 167
Query: 234 FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCN 293
S NY APE++ K + G D++S G + Y ++ R+ FD
Sbjct: 168 ----------------GSPNYAAPEVISGKLYA-GPEVDVWSCGVILYVMLCRRLPFDDE 210
Query: 294 NNVKMYMNTLTYLSSDAFSSIPSDLVPD----LQKMLSANESFRPTAMDFTGSRFFRDD 348
+ ++ N S+ ++P L P +++ML N R + + +F+ D
Sbjct: 211 SIPVLFKNI-----SNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 264
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 20/153 (13%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q A+ +++LH+ + +IHR + NI + + K+G FG A ++ S H
Sbjct: 140 QTAQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLA-------TEKSRWSGSHQF 191
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSK-TNSFGCSSDIFSFGCVAYHLIARK-PLFDCNNN 295
E L S+ + APE++R + N + SD+++FG V Y L+ + P + NN
Sbjct: 192 E--------QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 243
Query: 296 VK-MYMNTLTYLSSDAFSSIPSDLVPDLQKMLS 327
+ ++M YLS D S + S+ ++++++
Sbjct: 244 DQIIFMVGRGYLSPD-LSKVRSNCPKAMKRLMA 275
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 20/153 (13%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q A+ +++LH+ + +IHR + NI + + K+G FG A ++ S H
Sbjct: 132 QTAQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLA-------TEKSRWSGSHQF 183
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSK-TNSFGCSSDIFSFGCVAYHLIARK-PLFDCNNN 295
E L S+ + APE++R + N + SD+++FG V Y L+ + P + NN
Sbjct: 184 E--------QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 235
Query: 296 VK-MYMNTLTYLSSDAFSSIPSDLVPDLQKMLS 327
+ ++M YLS D S + S+ ++++++
Sbjct: 236 DQIIFMVGRGYLSPD-LSKVRSNCPKAMKRLMA 267
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 126/280 (45%), Gaps = 56/280 (20%)
Query: 74 VCVWVLDKRALSEARARAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNA 133
V + +++K+ L+++ + + + E ++L L LRHP I+ + + ++K+
Sbjct: 42 VALKIINKKVLAKSDMQGRIER--EISYLRL----------LRHPHIIKLYDVI-KSKDE 88
Query: 134 MAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLI 193
+ MV E N L ++ V R+ +MS E + QI ++E+ H + +++
Sbjct: 89 IIMVIE----YAGNELFDY----IVQRD----KMSEQEARRFFQQIISAVEYCHRH-KIV 135
Query: 194 HRAISPENILITSNGAWKLGGFGFA-ISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSL 252
HR + PEN+L+ + K+ FG + I TD +S S
Sbjct: 136 HRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC-------------------GSP 176
Query: 253 NYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSSDAFS 312
NY APE++ K + G D++S G + Y ++ R+ FD + ++ N S+
Sbjct: 177 NYAAPEVISGKLYA-GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI-----SNGVY 230
Query: 313 SIPSDLVPD----LQKMLSANESFRPTAMDFTGSRFFRDD 348
++P L P +++ML N R + + +F+ D
Sbjct: 231 TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 270
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 126/280 (45%), Gaps = 56/280 (20%)
Query: 74 VCVWVLDKRALSEARARAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNA 133
V + +++K+ L+++ + + + E ++L L LRHP I+ + + ++K+
Sbjct: 41 VALKIINKKVLAKSDMQGRIER--EISYLRL----------LRHPHIIKLYDVI-KSKDE 87
Query: 134 MAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLI 193
+ MV E N L ++ V R+ +MS E + QI ++E+ H + +++
Sbjct: 88 IIMVIE----YAGNELFDY----IVQRD----KMSEQEARRFFQQIISAVEYCHRH-KIV 134
Query: 194 HRAISPENILITSNGAWKLGGFGFA-ISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSL 252
HR + PEN+L+ + K+ FG + I TD +S S
Sbjct: 135 HRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC-------------------GSP 175
Query: 253 NYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSSDAFS 312
NY APE++ K + G D++S G + Y ++ R+ FD + ++ N S+
Sbjct: 176 NYAAPEVISGKLYA-GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI-----SNGVY 229
Query: 313 SIPSDLVPD----LQKMLSANESFRPTAMDFTGSRFFRDD 348
++P L P +++ML N R + + +F+ D
Sbjct: 230 TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 269
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS-DSSNVQAFHY 236
+I +LE+LH +IHR + PENIL+ + ++ FG T + +S +S +A +
Sbjct: 116 EIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFG----TAKVLSPESKQARANXF 170
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC-SSDIFSFGCVAYHLIARKPLFDCNNN 295
+ Y +PEL+ K+ C SSD+++ GC+ Y L+A P F N
Sbjct: 171 V------------GTAQYVSPELLTEKS---ACKSSDLWALGCIIYQLVAGLPPFRAGNE 215
Query: 296 VKMYMN--TLTYLSSDAFSSIPSDLVPDL 322
++ L Y + F DLV L
Sbjct: 216 YLIFQKIIKLEYDFPEKFFPKARDLVEKL 244
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 22/148 (14%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS-DSSNVQAFHY 236
+I +LE+LH +IHR + PENIL+ + ++ FG T + +S +S +A +
Sbjct: 140 EIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFG----TAKVLSPESKQARANSF 194
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNV 296
+ Y +PEL+ K+ S SSD+++ GC+ Y L+A P F N
Sbjct: 195 V------------GTAQYVSPELLTEKSAS--KSSDLWALGCIIYQLVAGLPPFRAGNEY 240
Query: 297 KMYMNT--LTYLSSDAFSSIPSDLVPDL 322
++ L Y + F DLV L
Sbjct: 241 LIFQKIIKLEYDFPEKFFPKARDLVEKL 268
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS-DSSNVQAFHY 236
+I +LE+LH +IHR + PENIL+ + ++ FG T + +S +S +A +
Sbjct: 115 EIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFG----TAKVLSPESKQARANXF 169
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC-SSDIFSFGCVAYHLIARKPLFDCNNN 295
+ Y +PEL+ K+ C SSD+++ GC+ Y L+A P F N
Sbjct: 170 V------------GTAQYVSPELLTEKS---ACKSSDLWALGCIIYQLVAGLPPFRAGNE 214
Query: 296 VKMYMNT--LTYLSSDAFSSIPSDLVPDL 322
++ L Y + F DLV L
Sbjct: 215 YLIFQKIIKLEYDFPEKFFPKARDLVEKL 243
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 28/171 (16%)
Query: 181 ESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYD 240
++LEFLHSN ++IHR I +NIL+ +G+ KL FGF S S + Y
Sbjct: 128 QALEFLHSN-QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPY---- 182
Query: 241 VEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK-MY 299
+ APE+V K ++G DI+S G +A +I +P + N ++ +Y
Sbjct: 183 -------------WMAPEVVTRK--AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY 227
Query: 300 M----NTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFFR 346
+ T + + S+I D L + L + R +A + +F +
Sbjct: 228 LIATNGTPELQNPEKLSAIFRDF---LNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS-DSSNVQAFHY 236
+I +LE+LH +IHR + PENIL+ + ++ FG T + +S +S +A +
Sbjct: 118 EIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFG----TAKVLSPESKQARANXF 172
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC-SSDIFSFGCVAYHLIARKPLFDCNNN 295
+ Y +PEL+ K+ C SSD+++ GC+ Y L+A P F N
Sbjct: 173 V------------GTAQYVSPELLTEKS---ACKSSDLWALGCIIYQLVAGLPPFRAGNE 217
Query: 296 VKMYMN--TLTYLSSDAFSSIPSDLVPDL 322
++ L Y + F DLV L
Sbjct: 218 YLIFQKIIKLEYDFPEKFFPKARDLVEKL 246
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS-DSSNVQAFHY 236
+I +LE+LH +IHR + PENIL+ + ++ FG T + +S +S +A +
Sbjct: 117 EIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFG----TAKVLSPESKQARANXF 171
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC-SSDIFSFGCVAYHLIARKPLFDCNNN 295
+ Y +PEL+ K+ C SSD+++ GC+ Y L+A P F N
Sbjct: 172 V------------GTAQYVSPELLTEKS---ACKSSDLWALGCIIYQLVAGLPPFRAGNE 216
Query: 296 VKMYMN--TLTYLSSDAFSSIPSDLVPDL 322
++ L Y + F DLV L
Sbjct: 217 YLIFQKIIKLEYDFPEKFFPKARDLVEKL 245
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 20/153 (13%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q A+ +++LH+ + +IHR + NI + + K+G FG A ++ S H
Sbjct: 112 QTAQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLA-------TEKSRWSGSHQF 163
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSK-TNSFGCSSDIFSFGCVAYHLIARK-PLFDCNNN 295
E L S+ + APE++R + N + SD+++FG V Y L+ + P + NN
Sbjct: 164 E--------QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 215
Query: 296 VK-MYMNTLTYLSSDAFSSIPSDLVPDLQKMLS 327
+ ++M YLS D S + S+ ++++++
Sbjct: 216 DQIIFMVGRGYLSPD-LSKVRSNCPKAMKRLMA 247
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 20/110 (18%)
Query: 181 ESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYD 240
++LEFLHSN ++IHR I +NIL+ +G+ KL FGF S S + Y
Sbjct: 127 QALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPY---- 181
Query: 241 VEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
+ APE+V K ++G DI+S G +A +I +P +
Sbjct: 182 -------------WMAPEVVTRK--AYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS-DSSNVQAFHY 236
+I +LE+LH +IHR + PENIL+ + ++ FG T + +S +S +A +
Sbjct: 143 EIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFG----TAKVLSPESKQARANXF 197
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC-SSDIFSFGCVAYHLIARKPLFDCNNN 295
+ Y +PEL+ K+ C SSD+++ GC+ Y L+A P F N
Sbjct: 198 V------------GTAQYVSPELLTEKS---ACKSSDLWALGCIIYQLVAGLPPFRAGNE 242
Query: 296 VKMYMNT--LTYLSSDAFSSIPSDLVPDL 322
++ L Y AF DLV L
Sbjct: 243 YLIFQKIIKLEYDFPAAFFPKARDLVEKL 271
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS-DSSNVQAFHY 236
+I +LE+LH +IHR + PENIL+ + ++ FG T + +S +S +A +
Sbjct: 140 EIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFG----TAKVLSPESKQARANXF 194
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC-SSDIFSFGCVAYHLIARKPLFDCNNN 295
+ Y +PEL+ K+ C SSD+++ GC+ Y L+A P F N
Sbjct: 195 V------------GTAQYVSPELLTEKS---ACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
Query: 296 VKMYMNT--LTYLSSDAFSSIPSDLVPDL 322
++ L Y + F DLV L
Sbjct: 240 YLIFQKIIKLEYDFPEKFFPKARDLVEKL 268
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 20/110 (18%)
Query: 181 ESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYD 240
++LEFLHSN ++IHR I +NIL+ +G+ KL FGF S S + Y
Sbjct: 127 QALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPY---- 181
Query: 241 VEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
+ APE+V K ++G DI+S G +A +I +P +
Sbjct: 182 -------------WMAPEVVTRK--AYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS-DSSNVQAFHY 236
+I +LE+LH +IHR + PENIL+ + ++ FG T + +S +S +A +
Sbjct: 138 EIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFG----TAKVLSPESKQARANXF 192
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC-SSDIFSFGCVAYHLIARKPLFDCNNN 295
+ Y +PEL+ K+ C SSD+++ GC+ Y L+A P F N
Sbjct: 193 V------------GTAQYVSPELLTEKS---ACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
Query: 296 VKMYMNT--LTYLSSDAFSSIPSDLVPDL 322
++ L Y + F DLV L
Sbjct: 238 YLIFQKIIKLEYDFPEKFFPKARDLVEKL 266
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS-DSSNVQAFHY 236
+I +LE+LH +IHR + PENIL+ + ++ FG T + +S +S +A +
Sbjct: 138 EIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFG----TAKVLSPESKQARANXF 192
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC-SSDIFSFGCVAYHLIARKPLFDCNNN 295
+ Y +PEL+ K+ C SSD+++ GC+ Y L+A P F N
Sbjct: 193 V------------GTAQYVSPELLTEKS---ACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
Query: 296 VKMYMNT--LTYLSSDAFSSIPSDLVPDL 322
++ L Y + F DLV L
Sbjct: 238 YLIFQKIIKLEYDFPEKFFPKARDLVEKL 266
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS-DSSNVQAFHY 236
+I +LE+LH +IHR + PENIL+ + ++ FG T + +S +S +A +
Sbjct: 138 EIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFG----TAKVLSPESKQARANXF 192
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC-SSDIFSFGCVAYHLIARKPLFDCNNN 295
+ Y +PEL+ K+ C SSD+++ GC+ Y L+A P F N
Sbjct: 193 V------------GTAQYVSPELLTEKS---ACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
Query: 296 VKMYMN--TLTYLSSDAFSSIPSDLVPDL 322
++ L Y + F DLV L
Sbjct: 238 YLIFQKIIKLEYDFPEKFFPKARDLVEKL 266
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS-DSSNVQAFHY 236
+I +LE+LH +IHR + PENIL+ + ++ FG T + +S +S +A +
Sbjct: 141 EIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFG----TAKVLSPESKQARANXF 195
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC-SSDIFSFGCVAYHLIARKPLFDCNNN 295
+ Y +PEL+ K+ C SSD+++ GC+ Y L+A P F N
Sbjct: 196 V------------GTAQYVSPELLTEKS---ACKSSDLWALGCIIYQLVAGLPPFRAGNE 240
Query: 296 VKMYMN--TLTYLSSDAFSSIPSDLVPDL 322
++ L Y + F DLV L
Sbjct: 241 YLIFQKIIKLEYDFPEKFFPKARDLVEKL 269
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 28/171 (16%)
Query: 181 ESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYD 240
++LEFLHSN ++IHR I +NIL+ +G+ KL FGF S S + Y
Sbjct: 128 QALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPY---- 182
Query: 241 VEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK-MY 299
+ APE+V K ++G DI+S G +A +I +P + N ++ +Y
Sbjct: 183 -------------WMAPEVVTRK--AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY 227
Query: 300 M----NTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFFR 346
+ T + + S+I D L + L + R +A + +F +
Sbjct: 228 LIATNGTPELQNPEKLSAIFRDF---LNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS-DSSNVQAFHY 236
+I +LE+LH +IHR + PENIL+ + ++ FG T + +S +S +A +
Sbjct: 140 EIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFG----TAKVLSPESKQARANXF 194
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC-SSDIFSFGCVAYHLIARKPLFDCNNN 295
+ Y +PEL+ K+ C SSD+++ GC+ Y L+A P F N
Sbjct: 195 V------------GTAQYVSPELLTEKS---ACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
Query: 296 VKMYMN--TLTYLSSDAFSSIPSDLVPDL 322
++ L Y + F DLV L
Sbjct: 240 YLIFQKIIKLEYDFPEKFFPKARDLVEKL 268
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS-DSSNVQAFHY 236
+I +LE+LH +IHR + PENIL+ + ++ FG T + +S +S +A +
Sbjct: 140 EIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFG----TAKVLSPESKQARANXF 194
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC-SSDIFSFGCVAYHLIARKPLFDCNNN 295
+ Y +PEL+ K+ C SSD+++ GC+ Y L+A P F N
Sbjct: 195 V------------GTAQYVSPELLTEKS---ACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
Query: 296 VKMYMN--TLTYLSSDAFSSIPSDLVPDL 322
++ L Y + F DLV L
Sbjct: 240 YLIFQKIIKLEYDFPEKFFPKARDLVEKL 268
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 91/220 (41%), Gaps = 36/220 (16%)
Query: 179 IAESLEFLHSNARLIHRAISPENILITS---NGAWKLGGFGFAISTDQAISDSSNVQAFH 235
I E++++LHS + HR + PEN+L TS N KL FGFA T + +++
Sbjct: 170 IGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET----TSHNSLTTPC 224
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
Y Y Y APE++ + C D++S G + Y L+ P F N+
Sbjct: 225 YTPY--------------YVAPEVLGPEKYDKSC--DMWSLGVIMYILLCGYPPFYSNHG 268
Query: 296 VKMY--MNTLTYLSSDAF-----SSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFFRDD 348
+ + M T + F S + ++ ++ +L + R T +F +
Sbjct: 269 LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 328
Query: 349 TR-----LRALRFLDHMLERDNMQKSEFLKALSDMWKDFD 383
T+ L R L ER K E AL+ M D++
Sbjct: 329 TKVPQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYE 368
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS-DSSNVQAFHY 236
+I +LE+LH +IHR + PENIL+ + ++ FG T + +S +S +A +
Sbjct: 141 EIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFG----TAKVLSPESKQARANSF 195
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC-SSDIFSFGCVAYHLIARKPLFDCNNN 295
+ Y +PEL+ K+ C SSD+++ GC+ Y L+A P F N
Sbjct: 196 V------------GTAQYVSPELLTEKS---ACKSSDLWALGCIIYQLVAGLPPFRAGNE 240
Query: 296 VKMYMN--TLTYLSSDAFSSIPSDLVPDL 322
++ L Y + F DLV L
Sbjct: 241 YLIFQKIIKLEYDFPEKFFPKARDLVEKL 269
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 91/220 (41%), Gaps = 36/220 (16%)
Query: 179 IAESLEFLHSNARLIHRAISPENILITS---NGAWKLGGFGFAISTDQAISDSSNVQAFH 235
I E++++LHS + HR + PEN+L TS N KL FGFA T + +++
Sbjct: 126 IGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET----TSHNSLTTPC 180
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
Y Y Y APE++ + C D++S G + Y L+ P F N+
Sbjct: 181 YTPY--------------YVAPEVLGPEKYDKSC--DMWSLGVIMYILLCGYPPFYSNHG 224
Query: 296 VKMY--MNTLTYLSSDAF-----SSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFFRDD 348
+ + M T + F S + ++ ++ +L + R T +F +
Sbjct: 225 LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 284
Query: 349 TR-----LRALRFLDHMLERDNMQKSEFLKALSDMWKDFD 383
T+ L R L ER K E AL+ M D++
Sbjct: 285 TKVPQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYE 324
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS-DSSNVQAFHY 236
+I +LE+LH +IHR + PENIL+ + ++ FG T + +S +S +A +
Sbjct: 122 EIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFG----TAKVLSPESKQARANXF 176
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC-SSDIFSFGCVAYHLIARKPLFDCNNN 295
+ Y +PEL+ K+ C SSD+++ GC+ Y L+A P F N
Sbjct: 177 V------------GTAQYVSPELLTEKS---ACKSSDLWALGCIIYQLVAGLPPFRAGNE 221
Query: 296 VKMYMNT--LTYLSSDAFSSIPSDLVPDL 322
++ L Y + F DLV L
Sbjct: 222 YLIFQKIIKLEYDFPEKFFPKARDLVEKL 250
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS-DSSNVQAFHY 236
+I +LE+LH +IHR + PENIL+ + ++ FG T + +S +S +A +
Sbjct: 145 EIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFG----TAKVLSPESKQARANXF 199
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC-SSDIFSFGCVAYHLIARKPLFDCNNN 295
+ Y +PEL+ K+ C SSD+++ GC+ Y L+A P F N
Sbjct: 200 V------------GTAQYVSPELLTEKS---ACKSSDLWALGCIIYQLVAGLPPFRAGNE 244
Query: 296 VKMYMNT--LTYLSSDAFSSIPSDLVPDL 322
++ L Y + F DLV L
Sbjct: 245 YLIFQKIIKLEYDFPEKFFPKARDLVEKL 273
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 20/110 (18%)
Query: 181 ESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYD 240
++LEFLHSN ++IHR I +NIL+ +G+ KL FGF S S + Y
Sbjct: 127 QALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPY---- 181
Query: 241 VEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
+ APE+V K ++G DI+S G +A +I +P +
Sbjct: 182 -------------WMAPEVVTRK--AYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 171 EMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSN 230
+++ + Q +++ LH + +IHR + P N+LI SN K+ FG A D++ +D+S
Sbjct: 113 HIQYFIYQTLRAVKVLHG-SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 231 VQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
+ M+ + Y APE++ + + + + D++S GC+ L R+P+F
Sbjct: 172 PTG-------QQSGMVEFVATRWYRAPEVMLT-SAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 91/220 (41%), Gaps = 36/220 (16%)
Query: 179 IAESLEFLHSNARLIHRAISPENILITS---NGAWKLGGFGFAISTDQAISDSSNVQAFH 235
I E++++LHS + HR + PEN+L TS N KL FGFA T + +++
Sbjct: 176 IGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET----TSHNSLTTPC 230
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
Y Y Y APE++ + C D++S G + Y L+ P F N+
Sbjct: 231 YTPY--------------YVAPEVLGPEKYDKSC--DMWSLGVIMYILLCGYPPFYSNHG 274
Query: 296 VKMY--MNTLTYLSSDAF-----SSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFFRDD 348
+ + M T + F S + ++ ++ +L + R T +F +
Sbjct: 275 LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 334
Query: 349 TR-----LRALRFLDHMLERDNMQKSEFLKALSDMWKDFD 383
T+ L R L ER K E AL+ M D++
Sbjct: 335 TKVPQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYE 374
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 89/220 (40%), Gaps = 36/220 (16%)
Query: 179 IAESLEFLHSNARLIHRAISPENILITS---NGAWKLGGFGFAISTDQAISDSSNVQAFH 235
I E++++LHS + HR + PEN+L TS N KL FGFA T + +++
Sbjct: 170 IGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET----TSHNSLTTPC 224
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
Y Y Y APE++ + C D +S G + Y L+ P F N+
Sbjct: 225 YTPY--------------YVAPEVLGPEKYDKSC--DXWSLGVIXYILLCGYPPFYSNHG 268
Query: 296 VKMYMNTLTYLSSDAF-------SSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFFRDD 348
+ + T + + S + ++ ++ +L + R T +F +
Sbjct: 269 LAISPGXKTRIRXGQYEFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQS 328
Query: 349 TR-----LRALRFLDHMLERDNMQKSEFLKALSDMWKDFD 383
T+ L R L ER K E AL+ M D++
Sbjct: 329 TKVPQTPLHTSRVLKEDKERWEDVKEEXTSALATMRVDYE 368
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
++ +L E+K + + L ++H N +++HR + N+LIT +G KL FG A +A
Sbjct: 120 VKFTLSEIKRVMQMLLNGLYYIHRN-KILHRDMKAANVLITRDGVLKLADFGLA----RA 174
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
S + N Q Y V +L Y PEL+ + + +G D++ GC+ +
Sbjct: 175 FSLAKNSQPNRYXNRVV---------TLWYRPPELLLGERD-YGPPIDLWGAGCIMAEMW 224
Query: 285 ARKPLFDCN 293
R P+ N
Sbjct: 225 TRSPIMQGN 233
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS-DSSNVQAFHY 236
+I +LE+LH +IHR + PENIL+ + ++ FG T + +S +S +A +
Sbjct: 138 EIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFG----TAKVLSPESKQARANAF 192
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC-SSDIFSFGCVAYHLIARKPLFDCNNN 295
+ Y +PEL+ K+ C SSD+++ GC+ Y L+A P F N
Sbjct: 193 V------------GTAQYVSPELLTEKS---ACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
Query: 296 VKMYMNT--LTYLSSDAFSSIPSDLVPDL 322
++ L Y + F DLV L
Sbjct: 238 YLIFQKIIKLEYDFPEKFFPKARDLVEKL 266
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS-DSSNVQAFHY 236
+I +LE+LH +IHR + PENIL+ + ++ FG T + +S +S +A +
Sbjct: 137 EIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFG----TAKVLSPESKQARANXF 191
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC-SSDIFSFGCVAYHLIARKPLFDCNNN 295
+ Y +PEL+ K+ C SSD+++ GC+ Y L+A P F N
Sbjct: 192 V------------GTAQYVSPELLTEKS---ACKSSDLWALGCIIYQLVAGLPPFRAGNE 236
Query: 296 VKMYMNT--LTYLSSDAFSSIPSDLVPDL 322
++ L Y + F DLV L
Sbjct: 237 YLIFQKIIKLEYDFPEKFFPKARDLVEKL 265
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS-DSSNVQAFHY 236
+I +LE+LH +IHR + PENIL+ + ++ FG T + +S +S +A +
Sbjct: 137 EIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFG----TAKVLSPESKQARANSF 191
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC-SSDIFSFGCVAYHLIARKPLFDCNNN 295
+ Y +PEL+ K+ C SSD+++ GC+ Y L+A P F N
Sbjct: 192 V------------GTAQYVSPELLTEKS---ACKSSDLWALGCIIYQLVAGLPPFRAGNE 236
Query: 296 VKMYMNT--LTYLSSDAFSSIPSDLVPDL 322
++ L Y + F DLV L
Sbjct: 237 YLIFQKIIKLEYDFPEKFFPKARDLVEKL 265
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
++ +L E+K + + L ++H N +++HR + N+LIT +G KL FG A +A
Sbjct: 120 VKFTLSEIKRVMQMLLNGLYYIHRN-KILHRDMKAANVLITRDGVLKLADFGLA----RA 174
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
S + N Q Y V +L Y PEL+ + + +G D++ GC+ +
Sbjct: 175 FSLAKNSQPNRYXNRVV---------TLWYRPPELLLGERD-YGPPIDLWGAGCIMAEMW 224
Query: 285 ARKPLFDCN 293
R P+ N
Sbjct: 225 TRSPIMQGN 233
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
++ +L E+K + + L ++H N +++HR + N+LIT +G KL FG A +A
Sbjct: 120 VKFTLSEIKRVMQMLLNGLYYIHRN-KILHRDMKAANVLITRDGVLKLADFGLA----RA 174
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
S + N Q Y V +L Y PEL+ + + +G D++ GC+ +
Sbjct: 175 FSLAKNSQPNRYXNRVV---------TLWYRPPELLLGERD-YGPPIDLWGAGCIMAEMW 224
Query: 285 ARKPLFDCN 293
R P+ N
Sbjct: 225 TRSPIMQGN 233
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
++ +L E+K + + L ++H N +++HR + N+LIT +G KL FG A +A
Sbjct: 119 VKFTLSEIKRVMQMLLNGLYYIHRN-KILHRDMKAANVLITRDGVLKLADFGLA----RA 173
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
S + N Q Y V +L Y PEL+ + + +G D++ GC+ +
Sbjct: 174 FSLAKNSQPNRYXNRVV---------TLWYRPPELLLGERD-YGPPIDLWGAGCIMAEMW 223
Query: 285 ARKPLFDCN 293
R P+ N
Sbjct: 224 TRSPIMQGN 232
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 91/220 (41%), Gaps = 36/220 (16%)
Query: 179 IAESLEFLHSNARLIHRAISPENILITS---NGAWKLGGFGFAISTDQAISDSSNVQAFH 235
I E++++LHS + HR + PEN+L TS N KL FGFA T + +++
Sbjct: 126 IGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET----TSHNSLTTPC 180
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
Y Y Y APE++ + C D++S G + Y L+ P F N+
Sbjct: 181 YTPY--------------YVAPEVLGPEKYDKSC--DMWSLGVIMYILLCGYPPFYSNHG 224
Query: 296 VKMY--MNTLTYLSSDAF-----SSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFFRDD 348
+ + M T + F S + ++ ++ +L + R T +F +
Sbjct: 225 LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 284
Query: 349 TR-----LRALRFLDHMLERDNMQKSEFLKALSDMWKDFD 383
T+ L R L ER K E AL+ M D++
Sbjct: 285 TKVPQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYE 324
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 94/222 (42%), Gaps = 34/222 (15%)
Query: 106 RADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGL 165
R + L ++HP IV ++ +EN + L+ + G ++ K KG+
Sbjct: 71 RREVAVLANMKHPNIVQYRESFEENGS--------LYIVMDYCEGG--DLFKRINAQKGV 120
Query: 166 EMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAI 225
++ +QI +L+ +H + +++HR I +NI +T +G +LG FG A + +
Sbjct: 121 LFQEDQILDWFVQICLALKHVH-DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179
Query: 226 SDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
+ Y Y +PE+ +K + SDI++ GCV Y L
Sbjct: 180 ELARACIGTPY-----------------YLSPEICENKP--YNNKSDIWALGCVLYELCT 220
Query: 286 RKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLS 327
K F+ + N + + S +F + DL+ ++S
Sbjct: 221 LKHAFEAGS----MKNLVLKIISGSFPPVSLHYSYDLRSLVS 258
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 77/153 (50%), Gaps = 20/153 (13%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q A+ +++LH+ + +IHR + NI + + K+G FG A V++
Sbjct: 139 QTAQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLA-----------TVKSRWSG 186
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSK-TNSFGCSSDIFSFGCVAYHLIARK-PLFDCNNN 295
+ E L S+ + APE++R + N + SD+++FG V Y L+ + P + NN
Sbjct: 187 SHQFEQ----LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 242
Query: 296 VK-MYMNTLTYLSSDAFSSIPSDLVPDLQKMLS 327
+ ++M YLS D S + S+ ++++++
Sbjct: 243 DQIIFMVGRGYLSPD-LSKVRSNCPKAMKRLMA 274
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 77/153 (50%), Gaps = 20/153 (13%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q A+ +++LH+ + +IHR + NI + + K+G FG A V++
Sbjct: 140 QTAQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLA-----------TVKSRWSG 187
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSK-TNSFGCSSDIFSFGCVAYHLIARK-PLFDCNNN 295
+ E L S+ + APE++R + N + SD+++FG V Y L+ + P + NN
Sbjct: 188 SHQFEQ----LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 243
Query: 296 VK-MYMNTLTYLSSDAFSSIPSDLVPDLQKMLS 327
+ ++M YLS D S + S+ ++++++
Sbjct: 244 DQIIFMVGRGYLSPD-LSKVRSNCPKAMKRLMA 275
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS-DSSNVQAFHY 236
+I +LE+LH +IHR + PENIL+ + ++ FG T + +S +S +A +
Sbjct: 140 EIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFG----TAKVLSPESKQARANXF 194
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC-SSDIFSFGCVAYHLIARKPLFDCNNN 295
+ Y +PEL+ K+ C SSD+++ GC+ Y L+A P F N
Sbjct: 195 V------------GTAQYVSPELLTEKS---ACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
Query: 296 VKMYMNT--LTYLSSDAFSSIPSDLVPDL 322
++ L Y + F DLV L
Sbjct: 240 GLIFAKIIKLEYDFPEKFFPKARDLVEKL 268
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 42/192 (21%)
Query: 114 RLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGN---FENVSKVPRELKGLEMSLL 170
+L+HP IV + ++ E E V +++ FE++ V RE S
Sbjct: 60 KLQHPNIVRLHDSIQE---------ESFHYLVFDLVTGGELFEDI--VAREF----YSEA 104
Query: 171 EMKHGLLQIAESLEFLHSNARLIHRAISPENILITS---NGAWKLGGFGFAISTDQAISD 227
+ H + QI ES+ + HSN ++HR + PEN+L+ S A KL FG AI ++D
Sbjct: 105 DASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIE----VND 159
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARK 287
S F + Y +PE++ K + + DI++ G + Y L+
Sbjct: 160 SEAWHGF--------------AGTPGYLSPEVL--KKDPYSKPVDIWACGVILYILLVGY 203
Query: 288 PLFDCNNNVKMY 299
P F + ++Y
Sbjct: 204 PPFWDEDQHRLY 215
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 109/256 (42%), Gaps = 42/256 (16%)
Query: 86 EARARAGLTKSAEDAFLDLVRA----DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPL 141
E A A K+ ++ D VR +A + + HP IV ++ + EN + M L
Sbjct: 35 ENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTL 94
Query: 142 FASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPEN 201
L +F V K +L L + Q++ +L +L S R +HR I+ N
Sbjct: 95 -----GELRSFLQVRKYSLDLASLILYAY-------QLSTALAYLESK-RFVHRDIAARN 141
Query: 202 ILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVR 261
+L++SN KLG FG + + + DS+ Y LP++ + APE +
Sbjct: 142 VLVSSNDCVKLGDFGLS----RYMEDSTY--------YKASKGKLPIK----WMAPESIN 185
Query: 262 SKTNSFGCSSDIFSFGCVAYHLIAR--KPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLV 319
+ F +SD++ FG + ++ KP NN + + + + +P +
Sbjct: 186 FR--RFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIENGERLPMPPNCP 238
Query: 320 PDLQKMLSANESFRPT 335
P L +++ ++ P+
Sbjct: 239 PTLYSLMTKCWAYDPS 254
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 42/192 (21%)
Query: 114 RLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGN---FENVSKVPRELKGLEMSLL 170
+L+HP IV + ++ E E V +++ FE++ V RE S
Sbjct: 61 KLQHPNIVRLHDSIQE---------ESFHYLVFDLVTGGELFEDI--VAREF----YSEA 105
Query: 171 EMKHGLLQIAESLEFLHSNARLIHRAISPENILITS---NGAWKLGGFGFAISTDQAISD 227
+ H + QI ES+ + HSN ++HR + PEN+L+ S A KL FG AI ++D
Sbjct: 106 DASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIE----VND 160
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARK 287
S F + Y +PE++ K + + DI++ G + Y L+
Sbjct: 161 SEAWHGF--------------AGTPGYLSPEVL--KKDPYSKPVDIWACGVILYILLVGY 204
Query: 288 PLFDCNNNVKMY 299
P F + ++Y
Sbjct: 205 PPFWDEDQHRLY 216
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 123/291 (42%), Gaps = 52/291 (17%)
Query: 86 EARARAGLTKSAEDAFLDLVRA----DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPL 141
E A A K+ ++ D VR +A + + HP IV ++ + EN + M L
Sbjct: 32 ENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTL 91
Query: 142 FASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPEN 201
L +F V K +L L + Q++ +L +L S R +HR I+ N
Sbjct: 92 -----GELRSFLQVRKYSLDLASLILYAY-------QLSTALAYLESK-RFVHRDIAARN 138
Query: 202 ILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVR 261
+L++SN KLG FG + + + DS+ Y LP++ + APE +
Sbjct: 139 VLVSSNDCVKLGDFGLS----RYMEDSTY--------YKASKGKLPIK----WMAPESIN 182
Query: 262 SKTNSFGCSSDIFSFGCVAYHLIAR--KPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLV 319
+ F +SD++ FG + ++ KP NN + + + + +P +
Sbjct: 183 FR--RFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIENGERLPMPPNCP 235
Query: 320 PDLQKMLSANESFRPTAMDFTGSRFFRDDTRLRALRFLDHMLERDNMQKSE 370
P L +++ ++ P+ RF T L+A L +LE + Q+ E
Sbjct: 236 PTLYSLMTKCWAYDPSRR----PRF----TELKAQ--LSTILEEEKAQQEE 276
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 77/153 (50%), Gaps = 20/153 (13%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q A+ +++LH+ + +IHR + NI + + K+G FG A V++
Sbjct: 117 QTAQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLA-----------TVKSRWSG 164
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSK-TNSFGCSSDIFSFGCVAYHLIARK-PLFDCNNN 295
+ E L S+ + APE++R + N + SD+++FG V Y L+ + P + NN
Sbjct: 165 SHQFEQ----LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 220
Query: 296 VK-MYMNTLTYLSSDAFSSIPSDLVPDLQKMLS 327
+ ++M YLS D S + S+ ++++++
Sbjct: 221 DQIIFMVGRGYLSPD-LSKVRSNCPKAMKRLMA 252
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 42/192 (21%)
Query: 114 RLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGN---FENVSKVPRELKGLEMSLL 170
+L+HP IV + ++ E E V +++ FE++ V RE S
Sbjct: 84 KLQHPNIVRLHDSIQE---------ESFHYLVFDLVTGGELFEDI--VAREF----YSEA 128
Query: 171 EMKHGLLQIAESLEFLHSNARLIHRAISPENILITS---NGAWKLGGFGFAISTDQAISD 227
+ H + QI ES+ + HSN ++HR + PEN+L+ S A KL FG AI ++D
Sbjct: 129 DASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIE----VND 183
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARK 287
S +A+H + Y +PE++ K + + DI++ G + Y L+
Sbjct: 184 S---EAWH-----------GFAGTPGYLSPEVL--KKDPYSKPVDIWACGVILYILLVGY 227
Query: 288 PLFDCNNNVKMY 299
P F + ++Y
Sbjct: 228 PPFWDEDQHRLY 239
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 77/153 (50%), Gaps = 20/153 (13%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q A+ +++LH+ + +IHR + NI + + K+G FG A V++
Sbjct: 114 QTAQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLA-----------TVKSRWSG 161
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSK-TNSFGCSSDIFSFGCVAYHLIARK-PLFDCNNN 295
+ E L S+ + APE++R + N + SD+++FG V Y L+ + P + NN
Sbjct: 162 SHQFEQ----LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 217
Query: 296 VK-MYMNTLTYLSSDAFSSIPSDLVPDLQKMLS 327
+ ++M YLS D S + S+ ++++++
Sbjct: 218 DQIIFMVGRGYLSPD-LSKVRSNCPKAMKRLMA 249
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 109/256 (42%), Gaps = 42/256 (16%)
Query: 86 EARARAGLTKSAEDAFLDLVRA----DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPL 141
E A A K+ ++ D VR +A + + HP IV ++ + EN + M L
Sbjct: 35 ENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTL 94
Query: 142 FASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPEN 201
L +F V K +L L + Q++ +L +L S R +HR I+ N
Sbjct: 95 -----GELRSFLQVRKYSLDLASLILYAY-------QLSTALAYLESK-RFVHRDIAARN 141
Query: 202 ILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVR 261
+L++SN KLG FG + + + DS+ Y LP++ + APE +
Sbjct: 142 VLVSSNDCVKLGDFGLS----RYMEDSTY--------YKASKGKLPIK----WMAPESIN 185
Query: 262 SKTNSFGCSSDIFSFGCVAYHLIAR--KPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLV 319
+ F +SD++ FG + ++ KP NN + + + + +P +
Sbjct: 186 FR--RFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIENGERLPMPPNCP 238
Query: 320 PDLQKMLSANESFRPT 335
P L +++ ++ P+
Sbjct: 239 PTLYSLMTKCWAYDPS 254
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 77/153 (50%), Gaps = 20/153 (13%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q A+ +++LH+ + +IHR + NI + + K+G FG A V++
Sbjct: 112 QTAQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLA-----------TVKSRWSG 159
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSK-TNSFGCSSDIFSFGCVAYHLIARK-PLFDCNNN 295
+ E L S+ + APE++R + N + SD+++FG V Y L+ + P + NN
Sbjct: 160 SHQFEQ----LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 215
Query: 296 VK-MYMNTLTYLSSDAFSSIPSDLVPDLQKMLS 327
+ ++M YLS D S + S+ ++++++
Sbjct: 216 DQIIFMVGRGYLSPD-LSKVRSNCPKAMKRLMA 247
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 33/236 (13%)
Query: 103 DLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPREL 162
+ VR + + LRHP +V++ A E+ N M M+ E F S + FE V+
Sbjct: 199 ETVRKEIQTMSVLRHPTLVNLHDAF-EDDNEMVMIYE--FMSGGEL---FEKVAD----- 247
Query: 163 KGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTD 222
+ +MS E + Q+ + L +H N +H + PENI+ T+ + +L F ++
Sbjct: 248 EHNKMSEDEAVEYMRQVCKGLCHMHEN-NYVHLDLKPENIMFTTKRSNELKLIDFGLT-- 304
Query: 223 QAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYH 282
A D + S+ + + APE+ K G +D++S G ++Y
Sbjct: 305 --------------AHLDPKQSVKVTTGTAEFAAPEVAEGK--PVGYYTDMWSVGVLSYI 348
Query: 283 LIARKPLFDCNNNVKMYMNTLT---YLSSDAFSSIPSDLVPDLQKMLSANESFRPT 335
L++ F N+ + N + + AFS I D ++K+L A+ + R T
Sbjct: 349 LLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMT 404
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 77/153 (50%), Gaps = 20/153 (13%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q A+ +++LH+ + +IHR + NI + + K+G FG A V++
Sbjct: 117 QTAQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLA-----------TVKSRWSG 164
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSK-TNSFGCSSDIFSFGCVAYHLIARK-PLFDCNNN 295
+ E L S+ + APE++R + N + SD+++FG V Y L+ + P + NN
Sbjct: 165 SHQFEQ----LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 220
Query: 296 VK-MYMNTLTYLSSDAFSSIPSDLVPDLQKMLS 327
+ ++M YLS D S + S+ ++++++
Sbjct: 221 DQIIFMVGRGYLSPD-LSKVRSNCPKAMKRLMA 252
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 77/153 (50%), Gaps = 20/153 (13%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q A+ +++LH+ + +IHR + NI + + K+G FG A V++
Sbjct: 112 QTAQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLA-----------TVKSRWSG 159
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSK-TNSFGCSSDIFSFGCVAYHLI-ARKPLFDCNNN 295
+ E L S+ + APE++R + N + SD+++FG V Y L+ + P + NN
Sbjct: 160 SHQFEQ----LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 215
Query: 296 VK-MYMNTLTYLSSDAFSSIPSDLVPDLQKMLS 327
+ ++M YLS D S + S+ ++++++
Sbjct: 216 DQIIFMVGRGYLSPD-LSKVRSNCPKAMKRLMA 247
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 42/192 (21%)
Query: 114 RLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGN---FENVSKVPRELKGLEMSLL 170
+L+HP IV + ++ E E V +++ FE++ V RE S
Sbjct: 61 KLQHPNIVRLHDSIQE---------ESFHYLVFDLVTGGELFEDI--VAREF----YSEA 105
Query: 171 EMKHGLLQIAESLEFLHSNARLIHRAISPENILITS---NGAWKLGGFGFAISTDQAISD 227
+ H + QI ES+ + HSN ++HR + PEN+L+ S A KL FG AI ++D
Sbjct: 106 DASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIE----VND 160
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARK 287
S F + Y +PE++ K + + DI++ G + Y L+
Sbjct: 161 SEAWHGF--------------AGTPGYLSPEVL--KKDPYSKPVDIWACGVILYILLVGY 204
Query: 288 PLFDCNNNVKMY 299
P F + ++Y
Sbjct: 205 PPFWDEDQHRLY 216
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 18/119 (15%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q A +++LH+ + +IHR + NI + + K+G FG A ++ S H
Sbjct: 128 QTARGMDYLHAKS-IIHRDLKSNNIFLHEDNTVKIGDFGLA-------TEKSRWSGSHQF 179
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSK-TNSFGCSSDIFSFGCVAYHLIARK-PLFDCNN 294
E L S+ + APE++R + +N + SD+++FG V Y L+ + P + NN
Sbjct: 180 E--------QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 230
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 9/120 (7%)
Query: 171 EMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSN 230
+++ + Q +++ LH + +IHR + P N+LI SN K+ FG A D++ +D+S
Sbjct: 113 HIQYFIYQTLRAVKVLHG-SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 231 VQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
+ M + Y APE++ + + + + D++S GC+ L R+P+F
Sbjct: 172 PTG-------QQSGMTEYVATRWYRAPEVMLT-SAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 18/119 (15%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q A +++LH+ + +IHR + NI + + K+G FG A ++ S H
Sbjct: 128 QTARGMDYLHAKS-IIHRDLKSNNIFLHEDNTVKIGDFGLA-------TEKSRWSGSHQF 179
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSK-TNSFGCSSDIFSFGCVAYHLIARK-PLFDCNN 294
E L S+ + APE++R + +N + SD+++FG V Y L+ + P + NN
Sbjct: 180 E--------QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 230
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 123/291 (42%), Gaps = 52/291 (17%)
Query: 86 EARARAGLTKSAEDAFLDLVRA----DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPL 141
E A A K+ ++ D VR +A + + HP IV ++ + EN + M L
Sbjct: 38 ENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTL 97
Query: 142 FASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPEN 201
L +F V K +L L + Q++ +L +L S R +HR I+ N
Sbjct: 98 -----GELRSFLQVRKYSLDLASLILYAY-------QLSTALAYLESK-RFVHRDIAARN 144
Query: 202 ILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVR 261
+L++SN KLG FG + + + DS+ Y LP++ + APE +
Sbjct: 145 VLVSSNDCVKLGDFGLS----RYMEDSTY--------YKASKGKLPIK----WMAPESIN 188
Query: 262 SKTNSFGCSSDIFSFGCVAYHLIAR--KPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLV 319
+ F +SD++ FG + ++ KP NN + + + + +P +
Sbjct: 189 FR--RFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIENGERLPMPPNCP 241
Query: 320 PDLQKMLSANESFRPTAMDFTGSRFFRDDTRLRALRFLDHMLERDNMQKSE 370
P L +++ ++ P+ RF T L+A L +LE + Q+ E
Sbjct: 242 PTLYSLMTKCWAYDPSRR----PRF----TELKAQ--LSTILEEEKAQQEE 282
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 123/291 (42%), Gaps = 52/291 (17%)
Query: 86 EARARAGLTKSAEDAFLDLVRA----DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPL 141
E A A K+ ++ D VR +A + + HP IV ++ + EN + M L
Sbjct: 37 ENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTL 96
Query: 142 FASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPEN 201
L +F V K +L L + Q++ +L +L S R +HR I+ N
Sbjct: 97 -----GELRSFLQVRKYSLDLASLILYAY-------QLSTALAYLESK-RFVHRDIAARN 143
Query: 202 ILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVR 261
+L++SN KLG FG + + + DS+ Y LP++ + APE +
Sbjct: 144 VLVSSNDCVKLGDFGLS----RYMEDSTY--------YKASKGKLPIK----WMAPESIN 187
Query: 262 SKTNSFGCSSDIFSFGCVAYHLIAR--KPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLV 319
+ F +SD++ FG + ++ KP NN + + + + +P +
Sbjct: 188 FR--RFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIENGERLPMPPNCP 240
Query: 320 PDLQKMLSANESFRPTAMDFTGSRFFRDDTRLRALRFLDHMLERDNMQKSE 370
P L +++ ++ P+ RF T L+A L +LE + Q+ E
Sbjct: 241 PTLYSLMTKCWAYDPSRR----PRF----TELKAQ--LSTILEEEKAQQEE 281
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 22/148 (14%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS-DSSNVQAFHY 236
+I +LE+LH +IHR + PENIL+ + ++ FG T + +S +S +A +
Sbjct: 140 EIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFG----TAKVLSPESKQARANXF 194
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNV 296
+ Y +PEL+ K+ SSD+++ GC+ Y L+A P F N
Sbjct: 195 V------------GTAQYVSPELLTEKSAX--KSSDLWALGCIIYQLVAGLPPFRAGNEG 240
Query: 297 KMYMNT--LTYLSSDAFSSIPSDLVPDL 322
++ L Y + F DLV L
Sbjct: 241 LIFAKIIKLEYDFPEKFFPKARDLVEKL 268
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 84/201 (41%), Gaps = 40/201 (19%)
Query: 94 TKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFE 153
++S AF+ +R +L R+ HP IV + A N + +V E +A ++
Sbjct: 42 SESERKAFIVELR----QLSRVNHPNIVKLYGAC---LNPVCLVME--YAEGGSLYNVLH 92
Query: 154 NVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHS--NARLIHRAISPENILITSNG-AW 210
+P MS LQ ++ + +LHS LIHR + P N+L+ + G
Sbjct: 93 GAEPLPYYTAAHAMSWC------LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVL 146
Query: 211 KLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCS 270
K+ FG A D++ M + S + APE+ S C
Sbjct: 147 KICDFGTAC--------------------DIQTHMTNNKGSAAWMAPEVFEGSNYSEKC- 185
Query: 271 SDIFSFGCVAYHLIARKPLFD 291
D+FS+G + + +I R+ FD
Sbjct: 186 -DVFSWGIILWEVITRRKPFD 205
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 33/236 (13%)
Query: 103 DLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPREL 162
+ VR + + LRHP +V++ A E+ N M M+ E F S + FE V+
Sbjct: 93 ETVRKEIQTMSVLRHPTLVNLHDAF-EDDNEMVMIYE--FMSGGEL---FEKVAD----- 141
Query: 163 KGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTD 222
+ +MS E + Q+ + L +H N +H + PENI+ T+ + +L F ++
Sbjct: 142 EHNKMSEDEAVEYMRQVCKGLCHMHEN-NYVHLDLKPENIMFTTKRSNELKLIDFGLT-- 198
Query: 223 QAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYH 282
A D + S+ + + APE+ K G +D++S G ++Y
Sbjct: 199 --------------AHLDPKQSVKVTTGTAEFAAPEVAEGK--PVGYYTDMWSVGVLSYI 242
Query: 283 LIARKPLFDCNNNVKMYMNTLT---YLSSDAFSSIPSDLVPDLQKMLSANESFRPT 335
L++ F N+ + N + + AFS I D ++K+L A+ + R T
Sbjct: 243 LLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMT 298
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 110/256 (42%), Gaps = 42/256 (16%)
Query: 86 EARARAGLTKSAEDAFLDLVRA----DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPL 141
E A A K+ ++ D VR +A + + HP IV ++ + EN + M L
Sbjct: 35 ENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTL 94
Query: 142 FASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPEN 201
L +F V K +L L + Q++ +L +L S R +HR I+ N
Sbjct: 95 -----GELRSFLQVRKFSLDLASLILYAY-------QLSTALAYLESK-RFVHRDIAARN 141
Query: 202 ILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVR 261
+L++SN KLG FG + + + DS+ +A LP++ + APE +
Sbjct: 142 VLVSSNDCVKLGDFGLS----RYMEDSTXXKA--------SKGKLPIK----WMAPESIN 185
Query: 262 SKTNSFGCSSDIFSFGCVAYHLIAR--KPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLV 319
+ F +SD++ FG + ++ KP NN + + + + +P +
Sbjct: 186 FR--RFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIENGERLPMPPNCP 238
Query: 320 PDLQKMLSANESFRPT 335
P L +++ ++ P+
Sbjct: 239 PTLYSLMTKCWAYDPS 254
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 70/145 (48%), Gaps = 20/145 (13%)
Query: 162 LKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAIST 221
LK ++S + + L QI L+++HS A ++HR + P N+LI + K+ FG A
Sbjct: 136 LKSQQLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLINTTCDLKICDFGLARIA 194
Query: 222 DQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAY 281
D E+D + + Y APE++ + + + S DI+S GC+
Sbjct: 195 D--------------PEHDHTGFLTEXVATRWYRAPEIMLN-SKGYTKSIDIWSVGCILA 239
Query: 282 HLIARKPLFDCNNNVKMYMNTLTYL 306
+++ +P+F K Y++ L ++
Sbjct: 240 EMLSNRPIFPG----KHYLDQLNHI 260
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 9/120 (7%)
Query: 171 EMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSN 230
+++ + Q +++ LH + +IHR + P N+LI SN K+ FG A D++ +D+S
Sbjct: 113 HIQYFIYQTLRAVKVLHG-SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 231 VQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
+ M + Y APE++ + + + + D++S GC+ L R+P+F
Sbjct: 172 PTG-------QQSGMTEXVATRWYRAPEVMLT-SAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 19/114 (16%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILI-TSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
QI E L++LH N +++HR I +N+LI T +G K+ FG ++ + + + F
Sbjct: 130 QILEGLKYLHDN-QIVHRDIKGDNVLINTYSGVLKISDFG---TSKRLAGINPCTETF-- 183
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
+L Y APE++ +G ++DI+S GC + KP F
Sbjct: 184 ------------TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 109/256 (42%), Gaps = 42/256 (16%)
Query: 86 EARARAGLTKSAEDAFLDLVRA----DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPL 141
E A A K+ ++ D VR +A + + HP IV ++ + EN + M L
Sbjct: 63 ENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTL 122
Query: 142 FASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPEN 201
L +F V K +L L + Q++ +L +L S R +HR I+ N
Sbjct: 123 -----GELRSFLQVRKYSLDLASLILYAY-------QLSTALAYLESK-RFVHRDIAARN 169
Query: 202 ILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVR 261
+L++SN KLG FG + + + DS+ Y LP++ + APE +
Sbjct: 170 VLVSSNDCVKLGDFGLS----RYMEDSTY--------YKASKGKLPIK----WMAPESIN 213
Query: 262 SKTNSFGCSSDIFSFGCVAYHLIAR--KPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLV 319
+ F +SD++ FG + ++ KP NN + + + + +P +
Sbjct: 214 FR--RFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIENGERLPMPPNCP 266
Query: 320 PDLQKMLSANESFRPT 335
P L +++ ++ P+
Sbjct: 267 PTLYSLMTKCWAYDPS 282
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 84/201 (41%), Gaps = 40/201 (19%)
Query: 94 TKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFE 153
++S AF+ +R +L R+ HP IV + A N + +V E +A ++
Sbjct: 41 SESERKAFIVELR----QLSRVNHPNIVKLYGAC---LNPVCLVME--YAEGGSLYNVLH 91
Query: 154 NVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHS--NARLIHRAISPENILITSNG-AW 210
+P MS LQ ++ + +LHS LIHR + P N+L+ + G
Sbjct: 92 GAEPLPYYTAAHAMSWC------LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVL 145
Query: 211 KLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCS 270
K+ FG A D++ M + S + APE+ S C
Sbjct: 146 KICDFGTAC--------------------DIQTHMTNNKGSAAWMAPEVFEGSNYSEKC- 184
Query: 271 SDIFSFGCVAYHLIARKPLFD 291
D+FS+G + + +I R+ FD
Sbjct: 185 -DVFSWGIILWEVITRRKPFD 204
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 109/256 (42%), Gaps = 42/256 (16%)
Query: 86 EARARAGLTKSAEDAFLDLVRA----DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPL 141
E A A K+ ++ D VR +A + + HP IV ++ + EN + M L
Sbjct: 40 ENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTL 99
Query: 142 FASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPEN 201
L +F V K +L L + Q++ +L +L S R +HR I+ N
Sbjct: 100 -----GELRSFLQVRKYSLDLASLILYAY-------QLSTALAYLESK-RFVHRDIAARN 146
Query: 202 ILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVR 261
+L++SN KLG FG + + + DS+ Y LP++ + APE +
Sbjct: 147 VLVSSNDCVKLGDFGLS----RYMEDSTY--------YKASKGKLPIK----WMAPESIN 190
Query: 262 SKTNSFGCSSDIFSFGCVAYHLIAR--KPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLV 319
+ F +SD++ FG + ++ KP NN + + + + +P +
Sbjct: 191 FR--RFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIENGERLPMPPNCP 243
Query: 320 PDLQKMLSANESFRPT 335
P L +++ ++ P+
Sbjct: 244 PTLYSLMTKCWAYDPS 259
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 88/188 (46%), Gaps = 34/188 (18%)
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLF-ASVANVLGNFENVSK 157
DA A+A + +LRH +V ++ + E K + +VTE + S+ + L
Sbjct: 227 DATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL------RS 280
Query: 158 VPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGF 217
R + G + LL+ L + E++E+L N +HR ++ N+L++ + K+ FG
Sbjct: 281 RGRSVLGGD-CLLKFS---LDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGL 335
Query: 218 AISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFG 277
++S+ Q + LP++ +TAPE +R K F SD++SFG
Sbjct: 336 T-------KEASSTQ---------DTGKLPVK----WTAPEALREK--KFSTKSDVWSFG 373
Query: 278 CVAYHLIA 285
+ + + +
Sbjct: 374 ILLWEIYS 381
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 122/313 (38%), Gaps = 61/313 (19%)
Query: 33 PKALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWV-LDKRALSEARARA 91
P +DYE+L IG+ G R + + R+ + VW LD +++EA +
Sbjct: 2 PSRAEDYEVLYTIGTGSYG--------RCQKIRRKSD--GKILVWKELDYGSMTEAEKQ- 50
Query: 92 GLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVV-QAMDENKNAMAMVTEPL-FASVANVL 149
++ ++ L L+HP IV + +D + +V E +A+V
Sbjct: 51 ------------MLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASV- 97
Query: 150 GNFENVSKVPRELKGL--EMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSN 207
++K +E + L E L M L + E ++HR + P N+ +
Sbjct: 98 -----ITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK 152
Query: 208 GAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSF 267
KLG FG A + D+S +AF Y Y +PE + S+
Sbjct: 153 QNVKLGDFGLARILNH---DTSFAKAFVGTPY--------------YMSPE--QMNRMSY 193
Query: 268 GCSSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQ---- 323
SDI+S GC+ Y L A P F + ++ + F IP +L
Sbjct: 194 NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGK----IREGKFRRIPYRYSDELNEIIT 249
Query: 324 KMLSANESFRPTA 336
+ML+ + RP+
Sbjct: 250 RMLNLKDYHRPSV 262
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 19/114 (16%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILI-TSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
QI E L++LH N +++HR I +N+LI T +G K+ FG ++ + + + F
Sbjct: 116 QILEGLKYLHDN-QIVHRDIKGDNVLINTYSGVLKISDFG---TSKRLAGINPCTETF-- 169
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
+L Y APE++ +G ++DI+S GC + KP F
Sbjct: 170 ------------TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 100/209 (47%), Gaps = 36/209 (17%)
Query: 90 RAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVL 149
++G T+ FL ++A + + HP ++H+ + ++ M ++TE +
Sbjct: 44 KSGYTEKQRRDFL----SEASIMGQFDHPNVIHLEGVVTKSTPVM-IITEFM-------- 90
Query: 150 GNFENVS--KVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSN 207
EN S R+ G + +++++ L IA +++L ++ +HRA++ NIL+ SN
Sbjct: 91 ---ENGSLDSFLRQNDG-QFTVIQLVGMLRGIAAGMKYL-ADMNYVHRALAARNILVNSN 145
Query: 208 GAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSF 267
K+ FG + + SD + A +P++ +TAPE ++ + F
Sbjct: 146 LVCKVSDFGLSRFLEDDTSDPTYTSAL--------GGKIPIR----WTAPEAIQYR--KF 191
Query: 268 GCSSDIFSFGCVAYHLI--ARKPLFDCNN 294
+SD++S+G V + ++ +P +D N
Sbjct: 192 TSASDVWSYGIVMWEVMSYGERPYWDMTN 220
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 109/256 (42%), Gaps = 42/256 (16%)
Query: 86 EARARAGLTKSAEDAFLDLVRA----DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPL 141
E A A K+ ++ D VR +A + + HP IV ++ + EN + M L
Sbjct: 415 ENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTL 474
Query: 142 FASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPEN 201
L +F V K +L L + Q++ +L +L S R +HR I+ N
Sbjct: 475 -----GELRSFLQVRKFSLDLASLILYAY-------QLSTALAYLESK-RFVHRDIAARN 521
Query: 202 ILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVR 261
+L++SN KLG FG + + + DS+ Y LP++ + APE +
Sbjct: 522 VLVSSNDCVKLGDFGLS----RYMEDSTY--------YKASKGKLPIK----WMAPESIN 565
Query: 262 SKTNSFGCSSDIFSFGCVAYHLIAR--KPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLV 319
+ F +SD++ FG + ++ KP NN + + + + +P +
Sbjct: 566 FR--RFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIENGERLPMPPNCP 618
Query: 320 PDLQKMLSANESFRPT 335
P L +++ ++ P+
Sbjct: 619 PTLYSLMTKCWAYDPS 634
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 38/187 (20%)
Query: 100 AFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLF-ASVANVLGNFENVSKV 158
AFL A+A + +LRH +V ++ + E K + +VTE + S+ + L
Sbjct: 45 AFL----AEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL------RSR 94
Query: 159 PRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFA 218
R + G + LL+ L + E++E+L N +HR ++ N+L++ + K+ FG
Sbjct: 95 GRSVLGGD-CLLKFS---LDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGLT 149
Query: 219 ISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGC 278
++S+ Q + LP++ +TAPE +R K F SD++SFG
Sbjct: 150 -------KEASSTQ---------DTGKLPVK----WTAPEALREK--KFSTKSDVWSFGI 187
Query: 279 VAYHLIA 285
+ + + +
Sbjct: 188 LLWEIYS 194
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 104/250 (41%), Gaps = 68/250 (27%)
Query: 116 RHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFE-----------NVSKVPRELKG 164
+H I+H++ A ++ +V +AS N+ ++++VP E
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIVE---YASKGNLREYLRARRPPGMEYSYDINRVPEE--- 152
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
+M+ ++ Q+A +E+L S + IHR ++ N+L+T N K+ FG A
Sbjct: 153 -QMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLA------ 204
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELV-------RSKTNSFGC-SSDIFSF 276
D +N+ + + LP++ + APE + +S SFG +IF+
Sbjct: 205 -RDINNIDYYK----KTTNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
Query: 277 GCVAYHLIARKPLF-------------DCNNNVKMYMNTLTYLSSDAFSSIPS------D 317
G Y I + LF +C N + M M D + ++PS
Sbjct: 256 GGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR-------DCWHAVPSQRPTFKQ 308
Query: 318 LVPDLQKMLS 327
LV DL ++L+
Sbjct: 309 LVEDLDRILT 318
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 38/187 (20%)
Query: 100 AFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLF-ASVANVLGNFENVSKV 158
AFL A+A + +LRH +V ++ + E K + +VTE + S+ + L
Sbjct: 60 AFL----AEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL------RSR 109
Query: 159 PRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFA 218
R + G + LL+ L + E++E+L N +HR ++ N+L++ + K+ FG
Sbjct: 110 GRSVLGGD-CLLKFS---LDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGLT 164
Query: 219 ISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGC 278
++S+ Q + LP++ +TAPE +R K F SD++SFG
Sbjct: 165 -------KEASSTQ---------DTGKLPVK----WTAPEALREK--KFSTKSDVWSFGI 202
Query: 279 VAYHLIA 285
+ + + +
Sbjct: 203 LLWEIYS 209
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 88/215 (40%), Gaps = 36/215 (16%)
Query: 179 IAESLEFLHSNARLIHRAISPENILITS---NGAWKLGGFGFAISTDQAISDSSNVQAFH 235
I E++++LHS + HR + PEN+L TS N KL FGFA T + +++
Sbjct: 124 IGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET----TSHNSLTTPC 178
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
Y Y Y APE++ + C D++S G + Y L+ P F N+
Sbjct: 179 YTPY--------------YVAPEVLGPEKYDKSC--DMWSLGVIMYILLCGYPPFYSNHG 222
Query: 296 VKMY--MNTLTYLSSDAF-----SSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFFRDD 348
+ + M T + F S + ++ ++ +L + R T +F +
Sbjct: 223 LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 282
Query: 349 TR-----LRALRFLDHMLERDNMQKSEFLKALSDM 378
T+ L R L ER K E AL+ M
Sbjct: 283 TKVPQTPLHTSRVLKEDKERWEDVKEEMTSALATM 317
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 88/215 (40%), Gaps = 36/215 (16%)
Query: 179 IAESLEFLHSNARLIHRAISPENILITS---NGAWKLGGFGFAISTDQAISDSSNVQAFH 235
I E++++LHS + HR + PEN+L TS N KL FGFA T + +++
Sbjct: 131 IGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET----TSHNSLTTPC 185
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
Y Y Y APE++ + C D++S G + Y L+ P F N+
Sbjct: 186 YTPY--------------YVAPEVLGPEKYDKSC--DMWSLGVIMYILLCGYPPFYSNHG 229
Query: 296 VKMY--MNTLTYLSSDAF-----SSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFFRDD 348
+ + M T + F S + ++ ++ +L + R T +F +
Sbjct: 230 LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 289
Query: 349 TR-----LRALRFLDHMLERDNMQKSEFLKALSDM 378
T+ L R L ER K E AL+ M
Sbjct: 290 TKVPQTPLHTSRVLKEDKERWEDVKEEMTSALATM 324
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 153 ENVSKVPRELKGLEMSL--LEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGA- 209
E V +V R + +L + +K + Q+ SL ++HS + HR I P+N+L+ + A
Sbjct: 115 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAV 173
Query: 210 WKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC 269
KL FG S Q + NV S Y APEL+ T+ +
Sbjct: 174 LKLCDFG---SAKQLVRGEPNVSXIC---------------SRYYRAPELIFGATD-YTS 214
Query: 270 SSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSS 308
S D++S GCV L+ +P+F ++ V + + L +
Sbjct: 215 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 253
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 88/215 (40%), Gaps = 36/215 (16%)
Query: 179 IAESLEFLHSNARLIHRAISPENILITS---NGAWKLGGFGFAISTDQAISDSSNVQAFH 235
I E++++LHS + HR + PEN+L TS N KL FGFA T + +++
Sbjct: 132 IGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET----TSHNSLTTPC 186
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
Y Y Y APE++ + C D++S G + Y L+ P F N+
Sbjct: 187 YTPY--------------YVAPEVLGPEKYDKSC--DMWSLGVIMYILLCGYPPFYSNHG 230
Query: 296 VKMY--MNTLTYLSSDAF-----SSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFFRDD 348
+ + M T + F S + ++ ++ +L + R T +F +
Sbjct: 231 LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 290
Query: 349 TR-----LRALRFLDHMLERDNMQKSEFLKALSDM 378
T+ L R L ER K E AL+ M
Sbjct: 291 TKVPQTPLHTSRVLKEDKERWEDVKEEMTSALATM 325
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 88/215 (40%), Gaps = 36/215 (16%)
Query: 179 IAESLEFLHSNARLIHRAISPENILITS---NGAWKLGGFGFAISTDQAISDSSNVQAFH 235
I E++++LHS + HR + PEN+L TS N KL FGFA T + +++
Sbjct: 130 IGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET----TSHNSLTTPC 184
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
Y Y Y APE++ + C D++S G + Y L+ P F N+
Sbjct: 185 YTPY--------------YVAPEVLGPEKYDKSC--DMWSLGVIMYILLCGYPPFYSNHG 228
Query: 296 VKMY--MNTLTYLSSDAF-----SSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFFRDD 348
+ + M T + F S + ++ ++ +L + R T +F +
Sbjct: 229 LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 288
Query: 349 TR-----LRALRFLDHMLERDNMQKSEFLKALSDM 378
T+ L R L ER K E AL+ M
Sbjct: 289 TKVPQTPLHTSRVLKEDKERWEDVKEEMTSALATM 323
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 21/143 (14%)
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
V PR+ KG E+ L +M H QIA + +L S +HR ++ N L+ +N K+G
Sbjct: 119 VDGQPRQAKG-ELGLSQMLHIASQIASGMVYLASQ-HFVHRDLATRNCLVGANLLVKIGD 176
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIF 274
FG +S D +D V +MLP++ + PE + + F SD++
Sbjct: 177 FG--MSRDVYSTDYYRVGG---------HTMLPIR----WMPPESIMYR--KFTTESDVW 219
Query: 275 SFGCVAYHLI--ARKPLFDCNNN 295
SFG + + + ++P F +N
Sbjct: 220 SFGVILWEIFTYGKQPWFQLSNT 242
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 153 ENVSKVPRELKGLEMSL--LEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGA- 209
E V +V R + +L + +K + Q+ SL ++HS + HR I P+N+L+ + A
Sbjct: 111 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAV 169
Query: 210 WKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC 269
KL FG S Q + NV S Y APEL+ T+ +
Sbjct: 170 LKLCDFG---SAKQLVRGEPNVSXIC---------------SRYYRAPELIFGATD-YTS 210
Query: 270 SSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSS 308
S D++S GCV L+ +P+F ++ V + + L +
Sbjct: 211 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 249
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 153 ENVSKVPRELKGLEMSL--LEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGA- 209
E V +V R + +L + +K + Q+ SL ++HS + HR I P+N+L+ + A
Sbjct: 122 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAV 180
Query: 210 WKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC 269
KL FG S Q + NV S Y APEL+ T+ +
Sbjct: 181 LKLCDFG---SAKQLVRGEPNVSXIC---------------SRYYRAPELIFGATD-YTS 221
Query: 270 SSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSS 308
S D++S GCV L+ +P+F ++ V + + L +
Sbjct: 222 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 260
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 153 ENVSKVPRELKGLEMSL--LEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGA- 209
E V +V R + +L + +K + Q+ SL ++HS + HR I P+N+L+ + A
Sbjct: 103 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAV 161
Query: 210 WKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC 269
KL FG S Q + NV S Y APEL+ T+ +
Sbjct: 162 LKLCDFG---SAKQLVRGEPNVSXIC---------------SRYYRAPELIFGATD-YTS 202
Query: 270 SSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSS 308
S D++S GCV L+ +P+F ++ V + + L +
Sbjct: 203 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 88/215 (40%), Gaps = 36/215 (16%)
Query: 179 IAESLEFLHSNARLIHRAISPENILITS---NGAWKLGGFGFAISTDQAISDSSNVQAFH 235
I E++++LHS + HR + PEN+L TS N KL FGFA T + +++
Sbjct: 124 IGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET----TSHNSLTEPC 178
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
Y Y Y APE++ + C D++S G + Y L+ P F N+
Sbjct: 179 YTPY--------------YVAPEVLGPEKYDKSC--DMWSLGVIMYILLCGYPPFYSNHG 222
Query: 296 VKMY--MNTLTYLSSDAF-----SSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFFRDD 348
+ + M T + F S + ++ ++ +L + R T +F +
Sbjct: 223 LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 282
Query: 349 TR-----LRALRFLDHMLERDNMQKSEFLKALSDM 378
T+ L R L ER K E AL+ M
Sbjct: 283 TKVPQTPLHTSRVLKEDKERWEDVKEEMTSALATM 317
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 153 ENVSKVPRELKGLEMSL--LEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGA- 209
E V +V R + +L + +K + Q+ SL ++HS + HR I P+N+L+ + A
Sbjct: 137 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAV 195
Query: 210 WKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC 269
KL FG S Q + NV S Y APEL+ T+ +
Sbjct: 196 LKLCDFG---SAKQLVRGEPNVSXIC---------------SRYYRAPELIFGATD-YTS 236
Query: 270 SSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSS 308
S D++S GCV L+ +P+F ++ V + + L +
Sbjct: 237 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 275
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 88/215 (40%), Gaps = 36/215 (16%)
Query: 179 IAESLEFLHSNARLIHRAISPENILITS---NGAWKLGGFGFAISTDQAISDSSNVQAFH 235
I E++++LHS + HR + PEN+L TS N KL FGFA T + +++
Sbjct: 140 IGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET----TSHNSLTTPC 194
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
Y Y Y APE++ + C D++S G + Y L+ P F N+
Sbjct: 195 YTPY--------------YVAPEVLGPEKYDKSC--DMWSLGVIMYILLCGYPPFYSNHG 238
Query: 296 VKMY--MNTLTYLSSDAF-----SSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFFRDD 348
+ + M T + F S + ++ ++ +L + R T +F +
Sbjct: 239 LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 298
Query: 349 TR-----LRALRFLDHMLERDNMQKSEFLKALSDM 378
T+ L R L ER K E AL+ M
Sbjct: 299 TKVPQTPLHTSRVLKEDKERWEDVKEEMTSALATM 333
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 153 ENVSKVPRELKGLEMSL--LEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGA- 209
E V +V R + +L + +K + Q+ SL ++HS + HR I P+N+L+ + A
Sbjct: 103 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAV 161
Query: 210 WKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC 269
KL FG S Q + NV S Y APEL+ T+ +
Sbjct: 162 LKLCDFG---SAKQLVRGEPNVSXIC---------------SRYYRAPELIFGATD-YTS 202
Query: 270 SSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSS 308
S D++S GCV L+ +P+F ++ V + + L +
Sbjct: 203 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 88/215 (40%), Gaps = 36/215 (16%)
Query: 179 IAESLEFLHSNARLIHRAISPENILITS---NGAWKLGGFGFAISTDQAISDSSNVQAFH 235
I E++++LHS + HR + PEN+L TS N KL FGFA T + +++
Sbjct: 125 IGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET----TSHNSLTTPC 179
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
Y Y Y APE++ + C D++S G + Y L+ P F N+
Sbjct: 180 YTPY--------------YVAPEVLGPEKYDKSC--DMWSLGVIMYILLCGYPPFYSNHG 223
Query: 296 VKMY--MNTLTYLSSDAF-----SSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFFRDD 348
+ + M T + F S + ++ ++ +L + R T +F +
Sbjct: 224 LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 283
Query: 349 TR-----LRALRFLDHMLERDNMQKSEFLKALSDM 378
T+ L R L ER K E AL+ M
Sbjct: 284 TKVPQTPLHTSRVLKEDKERWEDVKEEMTSALATM 318
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 153 ENVSKVPRELKGLEMSL--LEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGA- 209
E V +V R + +L + +K + Q+ SL ++HS + HR I P+N+L+ + A
Sbjct: 115 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAV 173
Query: 210 WKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC 269
KL FG S Q + NV S Y APEL+ T+ +
Sbjct: 174 LKLCDFG---SAKQLVRGEPNVSXIC---------------SRYYRAPELIFGATD-YTS 214
Query: 270 SSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSS 308
S D++S GCV L+ +P+F ++ V + + L +
Sbjct: 215 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 253
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 153 ENVSKVPRELKGLEMSL--LEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGA- 209
E V +V R + +L + +K + Q+ SL ++HS + HR I P+N+L+ + A
Sbjct: 103 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAV 161
Query: 210 WKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC 269
KL FG S Q + NV S Y APEL+ T+ +
Sbjct: 162 LKLCDFG---SAKQLVRGEPNVSXIC---------------SRYYRAPELIFGATD-YTS 202
Query: 270 SSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSS 308
S D++S GCV L+ +P+F ++ V + + L +
Sbjct: 203 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 153 ENVSKVPRELKGLEMSL--LEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGA- 209
E V +V R + +L + +K + Q+ SL ++HS + HR I P+N+L+ + A
Sbjct: 104 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAV 162
Query: 210 WKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC 269
KL FG S Q + NV S Y APEL+ T+ +
Sbjct: 163 LKLCDFG---SAKQLVRGEPNVSXIC---------------SRYYRAPELIFGATD-YTS 203
Query: 270 SSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSS 308
S D++S GCV L+ +P+F ++ V + + L +
Sbjct: 204 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 242
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 153 ENVSKVPRELKGLEMSL--LEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGA- 209
E V +V R + +L + +K + Q+ SL ++HS + HR I P+N+L+ + A
Sbjct: 116 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAV 174
Query: 210 WKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC 269
KL FG S Q + NV S Y APEL+ T+ +
Sbjct: 175 LKLCDFG---SAKQLVRGEPNVSYIC---------------SRYYRAPELIFGATD-YTS 215
Query: 270 SSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSS 308
S D++S GCV L+ +P+F ++ V + + L +
Sbjct: 216 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 254
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 153 ENVSKVPRELKGLEMSL--LEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGA- 209
E V +V R + +L + +K + Q+ SL ++HS + HR I P+N+L+ + A
Sbjct: 107 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAV 165
Query: 210 WKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC 269
KL FG S Q + NV S Y APEL+ T+ +
Sbjct: 166 LKLCDFG---SAKQLVRGEPNVSXIC---------------SRYYRAPELIFGATD-YTS 206
Query: 270 SSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSS 308
S D++S GCV L+ +P+F ++ V + + L +
Sbjct: 207 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 245
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 54/201 (26%)
Query: 154 NVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLG 213
++++VP E +M+ ++ Q+A +E+L S + IHR ++ N+L+T N K+
Sbjct: 145 DINRVPEE----QMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIA 199
Query: 214 GFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELV-------RSKTNS 266
FG A D +N+ + + + LP++ + APE + +S S
Sbjct: 200 DFGLA-------RDINNIDYYK----NTTNGRLPVK----WMAPEALFDRVYTHQSDVWS 244
Query: 267 FGC-SSDIFSFGCVAYHLIARKPLF-------------DCNNNVKMYMNTLTYLSSDAFS 312
FG +IF+ G Y I + LF +C N + M M D +
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR-------DCWH 297
Query: 313 SIPS------DLVPDLQKMLS 327
++PS LV DL ++L+
Sbjct: 298 AVPSQRPTFKQLVEDLDRILT 318
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 23/159 (14%)
Query: 153 ENVSKVPRELKGLEMSL--LEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGA- 209
E V +V R + +L + +K + Q+ SL ++HS + HR I P+N+L+ + A
Sbjct: 131 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAV 189
Query: 210 WKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC 269
KL FG S Q + NV ++ + Y Y APEL+ T+ +
Sbjct: 190 LKLCDFG---SAKQLVRGEPNV-SYICSRY--------------YRAPELIFGATD-YTS 230
Query: 270 SSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSS 308
S D++S GCV L+ +P+F ++ V + + L +
Sbjct: 231 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 269
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 23/159 (14%)
Query: 153 ENVSKVPRELKGLEMSL--LEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGA- 209
E V +V R + +L + +K + Q+ SL ++HS + HR I P+N+L+ + A
Sbjct: 137 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAV 195
Query: 210 WKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC 269
KL FG S Q + NV ++ + Y Y APEL+ T+ +
Sbjct: 196 LKLCDFG---SAKQLVRGEPNV-SYICSRY--------------YRAPELIFGATD-YTS 236
Query: 270 SSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSS 308
S D++S GCV L+ +P+F ++ V + + L +
Sbjct: 237 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 275
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 23/159 (14%)
Query: 153 ENVSKVPRELKGLEMSL--LEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGA- 209
E V +V R + +L + +K + Q+ SL ++HS + HR I P+N+L+ + A
Sbjct: 139 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAV 197
Query: 210 WKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC 269
KL FG S Q + NV ++ + Y Y APEL+ T+ +
Sbjct: 198 LKLCDFG---SAKQLVRGEPNV-SYICSRY--------------YRAPELIFGATD-YTS 238
Query: 270 SSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSS 308
S D++S GCV L+ +P+F ++ V + + L +
Sbjct: 239 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 277
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 54/201 (26%)
Query: 154 NVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLG 213
++++VP E +M+ ++ Q+A +E+L S + IHR ++ N+L+T N K+
Sbjct: 191 DINRVPEE----QMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIA 245
Query: 214 GFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELV-------RSKTNS 266
FG A D +N+ + + LP++ + APE + +S S
Sbjct: 246 DFGLA-------RDINNIDYYK----KTTNGRLPVK----WMAPEALFDRVYTHQSDVWS 290
Query: 267 FGC-SSDIFSFGCVAYHLIARKPLF-------------DCNNNVKMYMNTLTYLSSDAFS 312
FG +IF+ G Y I + LF +C N + M M D +
Sbjct: 291 FGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR-------DCWH 343
Query: 313 SIPS------DLVPDLQKMLS 327
++PS LV DL ++L+
Sbjct: 344 AVPSQRPTFKQLVEDLDRILT 364
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 18/119 (15%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q A +++LH+ + +IHR + NI + + K+G FG A V++
Sbjct: 116 QTARGMDYLHAKS-IIHRDLKSNNIFLHEDNTVKIGDFGLA-----------TVKSRWSG 163
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSK-TNSFGCSSDIFSFGCVAYHLIARK-PLFDCNN 294
+ E L S+ + APE++R + +N + SD+++FG V Y L+ + P + NN
Sbjct: 164 SHQFEQ----LSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 218
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 23/159 (14%)
Query: 153 ENVSKVPRELKGLEMSL--LEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGA- 209
E V +V R + +L + +K + Q+ SL ++HS + HR I P+N+L+ + A
Sbjct: 141 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAV 199
Query: 210 WKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC 269
KL FG S Q + NV ++ + Y Y APEL+ T+ +
Sbjct: 200 LKLCDFG---SAKQLVRGEPNV-SYICSRY--------------YRAPELIFGATD-YTS 240
Query: 270 SSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSS 308
S D++S GCV L+ +P+F ++ V + + L +
Sbjct: 241 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 279
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 153 ENVSKVPRELKGLEMSL--LEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGA- 209
E V +V R + +L + +K + Q+ SL ++HS + HR I P+N+L+ + A
Sbjct: 103 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAV 161
Query: 210 WKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC 269
KL FG S Q + NV S Y APEL+ T+ +
Sbjct: 162 LKLCDFG---SAKQLVRGEPNVSYIC---------------SRYYRAPELIFGATD-YTS 202
Query: 270 SSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSS 308
S D++S GCV L+ +P+F ++ V + + L +
Sbjct: 203 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 23/159 (14%)
Query: 153 ENVSKVPRELKGLEMSL--LEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGA- 209
E V +V R + +L + +K + Q+ SL ++HS + HR I P+N+L+ + A
Sbjct: 108 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAV 166
Query: 210 WKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC 269
KL FG S Q + NV ++ + Y Y APEL+ T+ +
Sbjct: 167 LKLCDFG---SAKQLVRGEPNV-SYICSRY--------------YRAPELIFGATD-YTS 207
Query: 270 SSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSS 308
S D++S GCV L+ +P+F ++ V + + L +
Sbjct: 208 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 246
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 153 ENVSKVPRELKGLEMSL--LEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGA- 209
E V +V R + +L + +K + Q+ SL ++HS + HR I P+N+L+ + A
Sbjct: 103 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAV 161
Query: 210 WKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC 269
KL FG S Q + NV S Y APEL+ T+ +
Sbjct: 162 LKLCDFG---SAKQLVRGEPNVSYIC---------------SRYYRAPELIFGATD-YTS 202
Query: 270 SSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSS 308
S D++S GCV L+ +P+F ++ V + + L +
Sbjct: 203 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 153 ENVSKVPRELKGLEMSL--LEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGA- 209
E V +V R + +L + +K + Q+ SL ++HS + HR I P+N+L+ + A
Sbjct: 103 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAV 161
Query: 210 WKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC 269
KL FG S Q + NV S Y APEL+ T+ +
Sbjct: 162 LKLCDFG---SAKQLVRGEPNVSYIC---------------SRYYRAPELIFGATD-YTS 202
Query: 270 SSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSS 308
S D++S GCV L+ +P+F ++ V + + L +
Sbjct: 203 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 109/265 (41%), Gaps = 49/265 (18%)
Query: 35 ALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLT 94
L+ YEL+ ++G G+ WK R +V + + +R E L+
Sbjct: 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELS 66
Query: 95 KSAEDA-FLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFE 153
L+++RAD + V L V M+ + +A+ AN+L E
Sbjct: 67 GHENIVNLLNVLRADNDRDVYL-------VFDYMETDLHAVIR---------ANIL---E 107
Query: 154 NVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLG 213
V K ++ + Q+ + +++LHS L+HR + P NIL+ + K+
Sbjct: 108 PVHK---------------QYVVYQLIKVIKYLHSGG-LLHRDMKPSNILLNAECHVKVA 151
Query: 214 GFGFA--------ISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTN 265
FG + ++ + +S + N + F D + + + Y APE++ T
Sbjct: 152 DFGLSRSFVNIRRVTNNIPLSINENTENFD----DDQPILTDYVATRWYRAPEILLGST- 206
Query: 266 SFGCSSDIFSFGCVAYHLIARKPLF 290
+ D++S GC+ ++ KP+F
Sbjct: 207 KYTKGIDMWSLGCILGEILCGKPIF 231
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 23/159 (14%)
Query: 153 ENVSKVPRELKGLEMSL--LEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGA- 209
E V +V R + +L + +K + Q+ SL ++HS + HR I P+N+L+ + A
Sbjct: 182 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAV 240
Query: 210 WKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC 269
KL FG S Q + NV ++ + Y Y APEL+ T+ +
Sbjct: 241 LKLCDFG---SAKQLVRGEPNV-SYICSRY--------------YRAPELIFGATD-YTS 281
Query: 270 SSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSS 308
S D++S GCV L+ +P+F ++ V + + L +
Sbjct: 282 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 320
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 121/313 (38%), Gaps = 61/313 (19%)
Query: 33 PKALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWV-LDKRALSEARARA 91
P +DYE+L IG+ G R + + R+ + VW LD +++EA +
Sbjct: 2 PSRAEDYEVLYTIGTGSYG--------RCQKIRRKSD--GKILVWKELDYGSMTEAEKQ- 50
Query: 92 GLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVV-QAMDENKNAMAMVTEPL-FASVANVL 149
++ ++ L L+HP IV + +D + +V E +A+V
Sbjct: 51 ------------MLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASV- 97
Query: 150 GNFENVSKVPRELKGL--EMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSN 207
++K +E + L E L M L + E ++HR + P N+ +
Sbjct: 98 -----ITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK 152
Query: 208 GAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSF 267
KLG FG A + D+S + F Y Y +PE + S+
Sbjct: 153 QNVKLGDFGLARILNH---DTSFAKTFVGTPY--------------YMSPEQMNRM--SY 193
Query: 268 GCSSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQ---- 323
SDI+S GC+ Y L A P F + ++ + F IP +L
Sbjct: 194 NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGK----IREGKFRRIPYRYSDELNEIIT 249
Query: 324 KMLSANESFRPTA 336
+ML+ + RP+
Sbjct: 250 RMLNLKDYHRPSV 262
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 118/291 (40%), Gaps = 48/291 (16%)
Query: 95 KSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFEN 154
K + + + D+++ + L +LRHP + A +V E S +++L
Sbjct: 92 KQSNEKWQDIIK-EVRFLQKLRHPNTIQYRGCYLREHTAW-LVMEYCLGSASDLL----E 145
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
V K P + E+ + + HG LQ L +LHS+ +IHR + NIL++ G KLG
Sbjct: 146 VHKKPLQ----EVEIAAVTHGALQ---GLAYLHSH-NMIHRDVKAGNILLSEPGLVKLGD 197
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRS-KTNSFGCSSDI 273
FG A S + F Y + APE++ + + D+
Sbjct: 198 FGSA-------SIMAPANXFVGTPY--------------WMAPEVILAMDEGQYDGKVDV 236
Query: 274 FSFGCVAYHLIARK-PLFDCNNNVKMY---MNTLTYLSSDAFSSIPSDLVPDLQKMLSAN 329
+S G L RK PLF+ N +Y N L S +S + V + + +
Sbjct: 237 WSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQD 296
Query: 330 ESFRPTAMDFTGSRFF---RDDTRLRAL--RFLDHMLERDNMQKSEFLKAL 375
RPT+ RF R T + L R D + E DN+Q + K L
Sbjct: 297 ---RPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAVRELDNLQYRKMKKIL 344
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 54/201 (26%)
Query: 154 NVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLG 213
++++VP E +M+ ++ Q+A +E+L S + IHR ++ N+L+T N K+
Sbjct: 145 DINRVPEE----QMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIA 199
Query: 214 GFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELV-------RSKTNS 266
FG A D +N+ + + LP++ + APE + +S S
Sbjct: 200 DFGLA-------RDINNIDYYK----KTTNGRLPVK----WMAPEALFDRVYTHQSDVWS 244
Query: 267 FGC-SSDIFSFGCVAYHLIARKPLF-------------DCNNNVKMYMNTLTYLSSDAFS 312
FG +IF+ G Y I + LF +C N + M M D +
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR-------DCWH 297
Query: 313 SIPS------DLVPDLQKMLS 327
++PS LV DL ++L+
Sbjct: 298 AVPSQRPTFKQLVEDLDRILT 318
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G K+ FGFA
Sbjct: 150 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIKVADFGFAKR----------------- 191
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 192 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 247 IYEKIVS-----GKVRFPSHFSSDLKDLL 270
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 54/201 (26%)
Query: 154 NVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLG 213
++++VP E +M+ ++ Q+A +E+L S + IHR ++ N+L+T N K+
Sbjct: 132 DINRVPEE----QMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLTARNVLVTENNVMKIA 186
Query: 214 GFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELV-------RSKTNS 266
FG A D +N+ + + LP++ + APE + +S S
Sbjct: 187 DFGLA-------RDINNIDYYK----KTTNGRLPVK----WMAPEALFDRVYTHQSDVWS 231
Query: 267 FGC-SSDIFSFGCVAYHLIARKPLF-------------DCNNNVKMYMNTLTYLSSDAFS 312
FG +IF+ G Y I + LF +C N + M M D +
Sbjct: 232 FGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR-------DCWH 284
Query: 313 SIPS------DLVPDLQKMLS 327
++PS LV DL ++L+
Sbjct: 285 AVPSQRPTFKQLVEDLDRILT 305
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 54/201 (26%)
Query: 154 NVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLG 213
++++VP E +M+ ++ Q+A +E+L S + IHR ++ N+L+T N K+
Sbjct: 145 DINRVPEE----QMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIA 199
Query: 214 GFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELV-------RSKTNS 266
FG A D +N+ + + LP++ + APE + +S S
Sbjct: 200 DFGLA-------RDINNIDYYK----KTTNGRLPVK----WMAPEALFDRVYTHQSDVWS 244
Query: 267 FGC-SSDIFSFGCVAYHLIARKPLF-------------DCNNNVKMYMNTLTYLSSDAFS 312
FG +IF+ G Y I + LF +C N + M M D +
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR-------DCWH 297
Query: 313 SIPS------DLVPDLQKMLS 327
++PS LV DL ++L+
Sbjct: 298 AVPSQRPTFKQLVEDLDRILT 318
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 54/201 (26%)
Query: 154 NVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLG 213
++++VP E +M+ ++ Q+A +E+L S + IHR ++ N+L+T N K+
Sbjct: 145 DINRVPEE----QMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIA 199
Query: 214 GFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELV-------RSKTNS 266
FG A D +N+ + + LP++ + APE + +S S
Sbjct: 200 DFGLA-------RDINNIDYYK----KTTNGRLPVK----WMAPEALFDRVYTHQSDVWS 244
Query: 267 FGC-SSDIFSFGCVAYHLIARKPLF-------------DCNNNVKMYMNTLTYLSSDAFS 312
FG +IF+ G Y I + LF +C N + M M D +
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR-------DCWH 297
Query: 313 SIPS------DLVPDLQKMLS 327
++PS LV DL ++L+
Sbjct: 298 AVPSQRPTFKQLVEDLDRILT 318
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 34/201 (16%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAIS-TDQAISDSSNVQAF 234
L +I + L++LHS + IHR I N+L++ G KL FG A TD I ++ V
Sbjct: 126 LKEILKGLDYLHSEKK-IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGT- 183
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNN 294
P + APE+++ +++ +DI+S G A L +P
Sbjct: 184 ------------PF-----WMAPEVIQQ--SAYDSKADIWSLGITAIELAKGEP-----P 219
Query: 295 NVKMY-MNTLTYLSSDAFSSIPSDLVPDLQKMLSA----NESFRPTAMDFTGSRFFRDDT 349
N M+ M L + + ++ D ++ + A + SFRPTA + +F ++
Sbjct: 220 NSDMHPMRVLFLIPKNNPPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNS 279
Query: 350 RLRALRFLDHMLERDNMQKSE 370
+ + +L +++R K+E
Sbjct: 280 KKTS--YLTELIDRFKRWKAE 298
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 54/201 (26%)
Query: 154 NVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLG 213
++++VP E +M+ ++ Q+A +E+L S + IHR ++ N+L+T N K+
Sbjct: 137 DINRVPEE----QMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIA 191
Query: 214 GFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELV-------RSKTNS 266
FG A D +N+ + + LP++ + APE + +S S
Sbjct: 192 DFGLA-------RDINNIDYYK----KTTNGRLPVK----WMAPEALFDRVYTHQSDVWS 236
Query: 267 FGC-SSDIFSFGCVAYHLIARKPLF-------------DCNNNVKMYMNTLTYLSSDAFS 312
FG +IF+ G Y I + LF +C N + M M D +
Sbjct: 237 FGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR-------DCWH 289
Query: 313 SIPS------DLVPDLQKMLS 327
++PS LV DL ++L+
Sbjct: 290 AVPSQRPTFKQLVEDLDRILT 310
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 118/291 (40%), Gaps = 48/291 (16%)
Query: 95 KSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFEN 154
K + + + D+++ + L +LRHP + A +V E S +++L
Sbjct: 53 KQSNEKWQDIIK-EVRFLQKLRHPNTIQYRGCYLREHTAW-LVMEYCLGSASDLL----E 106
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
V K P + E+ + + HG LQ L +LHS+ +IHR + NIL++ G KLG
Sbjct: 107 VHKKPLQ----EVEIAAVTHGALQ---GLAYLHSH-NMIHRDVKAGNILLSEPGLVKLGD 158
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRS-KTNSFGCSSDI 273
FG A S + F Y + APE++ + + D+
Sbjct: 159 FGSA-------SIMAPANXFVGTPY--------------WMAPEVILAMDEGQYDGKVDV 197
Query: 274 FSFGCVAYHLIARK-PLFDCNNNVKMY---MNTLTYLSSDAFSSIPSDLVPDLQKMLSAN 329
+S G L RK PLF+ N +Y N L S +S + V + + +
Sbjct: 198 WSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQD 257
Query: 330 ESFRPTAMDFTGSRFF---RDDTRLRAL--RFLDHMLERDNMQKSEFLKAL 375
RPT+ RF R T + L R D + E DN+Q + K L
Sbjct: 258 ---RPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAVRELDNLQYRKMKKIL 305
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 31/185 (16%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP I+ ++ A N ++ V E +V + L ++
Sbjct: 66 LQELSHPNIIGLLDAFGHKSN------------ISLVFDFMETDLEVIIKDNSLVLTPSH 113
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
+K +L + LE+LH + ++HR + P N+L+ NG KL FG A S S N
Sbjct: 114 IKAYMLMTLQGLEYLHQHW-ILHRDLKPNNLLLDENGVLKLADFGLAKSF-----GSPNR 167
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
H + Y APEL+ +G D+++ GC+ L+ R P
Sbjct: 168 AYXHQVV------------TRWYRAPELLFG-ARMYGVGVDMWAVGCILAELLLRVPFLP 214
Query: 292 CNNNV 296
++++
Sbjct: 215 GDSDL 219
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 54/201 (26%)
Query: 154 NVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLG 213
++++VP E +M+ ++ Q+A +E+L S + IHR ++ N+L+T N K+
Sbjct: 145 DINRVPEE----QMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIA 199
Query: 214 GFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELV-------RSKTNS 266
FG A D +N+ + + LP++ + APE + +S S
Sbjct: 200 DFGLA-------RDINNIDYYK----KTTNGRLPVK----WMAPEALFDRVYTHQSDVWS 244
Query: 267 FGC-SSDIFSFGCVAYHLIARKPLF-------------DCNNNVKMYMNTLTYLSSDAFS 312
FG +IF+ G Y I + LF +C N + M M D +
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR-------DCWH 297
Query: 313 SIPS------DLVPDLQKMLS 327
++PS LV DL ++L+
Sbjct: 298 AVPSQRPTFKQLVEDLDRILT 318
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G K+ FGFA
Sbjct: 149 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIKVADFGFAKR----------------- 190
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 191 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 246 IYEKIVS-----GKVRFPSHFSSDLKDLL 269
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G K+ FGFA
Sbjct: 149 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIKVADFGFAKR----------------- 190
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 191 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 246 IYEKIVS-----GKVRFPSHFSSDLKDLL 269
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 33/152 (21%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q A+ +++LH+ +IHR + NI + K+G FG A + S S V+
Sbjct: 140 QTAQGMDYLHAK-NIIHRDMKSNNIFLHEGLTVKIGDFGLA-TVKSRWSGSQQVE----- 192
Query: 238 EYDVEDSMLPLQP--SLNYTAPELVRSKTNS-FGCSSDIFSFGCVAYHLIARK-PLFDCN 293
QP S+ + APE++R + N+ F SD++S+G V Y L+ + P N
Sbjct: 193 -----------QPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN 241
Query: 294 NNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKM 325
N + + ++ ++S PDL K+
Sbjct: 242 NR-----DQIIFMVGRGYAS------PDLSKL 262
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G K+ FGFA
Sbjct: 149 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIKVADFGFAKR----------------- 190
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 191 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 246 IYEKIVS-----GKVRFPSHFSSDLKDLL 269
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 54/201 (26%)
Query: 154 NVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLG 213
++++VP E +M+ ++ Q+A +E+L S + IHR ++ N+L+T N K+
Sbjct: 134 DINRVPEE----QMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIA 188
Query: 214 GFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELV-------RSKTNS 266
FG A D +N+ + + LP++ + APE + +S S
Sbjct: 189 DFGLA-------RDINNIDYYK----KTTNGRLPVK----WMAPEALFDRVYTHQSDVWS 233
Query: 267 FGC-SSDIFSFGCVAYHLIARKPLF-------------DCNNNVKMYMNTLTYLSSDAFS 312
FG +IF+ G Y I + LF +C N + M M D +
Sbjct: 234 FGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR-------DCWH 286
Query: 313 SIPS------DLVPDLQKMLS 327
++PS LV DL ++L+
Sbjct: 287 AVPSQRPTFKQLVEDLDRILT 307
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 39/199 (19%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ Q+ L+++HS A +IHR + P N+ + + ++ FG A D+ ++ +
Sbjct: 137 VYQLLRGLKYIHS-AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRW-- 193
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF---DC 292
Y APE++ + + + + DI+S GC+ L+ K LF D
Sbjct: 194 ------------------YRAPEIMLNWMH-YNQTVDIWSVGCIMAELLQGKALFPGSDY 234
Query: 293 NNNVKMYMNTLTYLSSDAFSSIPSD--------LVPDLQKMLSANESFR---PTAMDFTG 341
+ +K M + S + + I S+ L P QK LS+ FR P A+D G
Sbjct: 235 IDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSS--IFRGANPLAIDLLG 292
Query: 342 SRFFRD-DTRLRALRFLDH 359
D D R+ A L H
Sbjct: 293 RMLVLDSDQRVSAAEALAH 311
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 39/199 (19%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ Q+ L+++HS A +IHR + P N+ + + ++ FG A D+ ++ +
Sbjct: 137 VYQLLRGLKYIHS-AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRW-- 193
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF---DC 292
Y APE++ + + + + DI+S GC+ L+ K LF D
Sbjct: 194 ------------------YRAPEIMLNWMH-YNQTVDIWSVGCIMAELLQGKALFPGSDY 234
Query: 293 NNNVKMYMNTLTYLSSDAFSSIPSD--------LVPDLQKMLSANESFR---PTAMDFTG 341
+ +K M + S + + I S+ L P QK LS+ FR P A+D G
Sbjct: 235 IDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSS--IFRGANPLAIDLLG 292
Query: 342 SRFFRD-DTRLRALRFLDH 359
D D R+ A L H
Sbjct: 293 RMLVLDSDQRVSAAEALAH 311
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ GFG A TD
Sbjct: 131 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILGFGLARHTD------------- 176
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 177 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 296 V 296
+
Sbjct: 229 I 229
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 99/209 (47%), Gaps = 36/209 (17%)
Query: 90 RAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVL 149
++G T+ FL ++A + + HP ++H+ + ++ M ++TE +
Sbjct: 70 KSGYTEKQRRDFL----SEASIMGQFDHPNVIHLEGVVTKSTPVM-IITEFM-------- 116
Query: 150 GNFENVS--KVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSN 207
EN S R+ G + +++++ L IA +++L ++ +HR ++ NIL+ SN
Sbjct: 117 ---ENGSLDSFLRQNDG-QFTVIQLVGMLRGIAAGMKYL-ADMNYVHRDLAARNILVNSN 171
Query: 208 GAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSF 267
K+ FG + + SD + A +P++ +TAPE ++ + F
Sbjct: 172 LVCKVSDFGLSRFLEDDTSDPTYTSAL--------GGKIPIR----WTAPEAIQYR--KF 217
Query: 268 GCSSDIFSFGCVAYHLI--ARKPLFDCNN 294
+SD++S+G V + ++ +P +D N
Sbjct: 218 TSASDVWSYGIVMWEVMSYGERPYWDMTN 246
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 89/204 (43%), Gaps = 32/204 (15%)
Query: 106 RADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGL 165
+ D +VRLR+ +++ + +V + + A+V V ++ +
Sbjct: 69 KLDHCNIVRLRY---FFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQT------- 118
Query: 166 EMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGA-WKLGGFGFAISTDQA 224
+ ++ +K + Q+ SL ++HS + HR I P+N+L+ + A KL FG S Q
Sbjct: 119 -LPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFG---SAKQL 173
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
+ NV S Y APEL+ T+ + S D++S GCV L+
Sbjct: 174 VRGEPNVSXIC---------------SRYYRAPELIFGATD-YTSSIDVWSAGCVLAELL 217
Query: 285 ARKPLFDCNNNVKMYMNTLTYLSS 308
+P+F ++ V + + L +
Sbjct: 218 LGQPIFPGDSGVDQLVEIIKVLGT 241
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 75/176 (42%), Gaps = 31/176 (17%)
Query: 115 LRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKH 174
L+H IV + + + ++ +V E L + L + N+ +++ +K
Sbjct: 57 LKHANIV-TLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNI-----------INMHNVKL 104
Query: 175 GLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAF 234
L Q+ L + H +++HR + P+N+LI G KL FG A ++
Sbjct: 105 FLFQLLRGLAYCHRQ-KVLHRDLKPQNLLINERGELKLADFGLA-----------RAKSI 152
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
YD E L +P P+++ T+ + D++ GC+ Y + +PLF
Sbjct: 153 PTKTYDNEVVTLWYRP------PDILLGSTD-YSTQIDMWGVGCIFYEMATGRPLF 201
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 21/113 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
+I LE LH R+++R + PENIL+ +G ++ G A+ + + V
Sbjct: 294 EICCGLEDLHRE-RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVG----- 347
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
++ Y APE+V+++ +F S D ++ GC+ Y +IA + F
Sbjct: 348 -------------TVGYMAPEVVKNERYTF--SPDWWALGCLLYEMIAGQSPF 385
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 88/188 (46%), Gaps = 34/188 (18%)
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLF-ASVANVLGNFENVSK 157
DA A+A + +LRH +V ++ + E K + +VTE + S+ + L
Sbjct: 46 DATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL------RS 99
Query: 158 VPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGF 217
R + G + LL+ L + E++E+L N +HR ++ N+L++ + K+ FG
Sbjct: 100 RGRSVLGGD-CLLKFS---LDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGL 154
Query: 218 AISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFG 277
++S+ Q + LP++ +TAPE +R +F SD++SFG
Sbjct: 155 T-------KEASSTQ---------DTGKLPVK----WTAPEALREA--AFSTKSDVWSFG 192
Query: 278 CVAYHLIA 285
+ + + +
Sbjct: 193 ILLWEIYS 200
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 20/145 (13%)
Query: 162 LKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAIST 221
LK +S + + L QI L+++HS A ++HR + P N+L+ + K+ FG A
Sbjct: 116 LKTQHLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTXDLKIXDFGLA--- 171
Query: 222 DQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAY 281
++D + EY + Y APE++ + + + S DI+S GC+
Sbjct: 172 --RVADPDHDHTGFLTEY---------VATRWYRAPEIMLN-SKGYTKSIDIWSVGCILA 219
Query: 282 HLIARKPLFDCNNNVKMYMNTLTYL 306
+++ +P+F K Y++ L ++
Sbjct: 220 EMLSNRPIFPG----KHYLDQLNHI 240
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 32/180 (17%)
Query: 115 LRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKH 174
L HP IV + + + E + + ++ E +AS V F+ + R M E +
Sbjct: 68 LNHPNIVKLFEVI-ETEKTLYLIME--YASGGEV---FDYLVAHGR------MKEKEARS 115
Query: 175 GLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAF 234
QI ++++ H R++HR + EN+L+ ++ K+ FGF+
Sbjct: 116 KFRQIVSAVQYCHQK-RIVHRDLKAENLLLDADMNIKIADFGFS---------------- 158
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNN 294
E+ V + S Y APEL + K G D++S G + Y L++ FD N
Sbjct: 159 --NEFTVGGKLDTFCGSPPYAAPELFQGKKYD-GPEVDVWSLGVILYTLVSGSLPFDGQN 215
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 113/267 (42%), Gaps = 48/267 (17%)
Query: 104 LVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELK 163
+VR + G L+RL HP I+ + + E +++V E + F+ + + K
Sbjct: 94 IVRTEIGVLLRLSHPNIIKLKEIF-ETPTEISLVLELVTGGEL-----FDRIVE-----K 142
Query: 164 GLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITS---NGAWKLGGFGFAIS 220
G S + + QI E++ +LH N ++HR + PEN+L + + K+ FG +
Sbjct: 143 GY-YSERDAADAVKQILEAVAYLHENG-IVHRDLKPENLLYATPAPDAPLKIADFGLSKI 200
Query: 221 TDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVA 280
+ + M + + Y APE++R ++G D++S G +
Sbjct: 201 VEHQV------------------LMKTVCGTPGYCAPEILRG--CAYGPEVDMWSVGIIT 240
Query: 281 YHLIAR-KPLFDCNNNVKMY---MNTLTYLSS---DAFSSIPSDLVPDL-----QKMLSA 328
Y L+ +P +D + M+ +N Y S D S DLV L +K L+
Sbjct: 241 YILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTT 300
Query: 329 NESFRPTAMDFTGSRFFRDDTRLRALR 355
++ + + + F DT + L+
Sbjct: 301 FQALQHPWVTGKAANFVHMDTAQKKLQ 327
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 21/113 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
+I LE LH R+++R + PENIL+ +G ++ G A+ + + V
Sbjct: 294 EICCGLEDLHRE-RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVG----- 347
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
++ Y APE+V+++ +F S D ++ GC+ Y +IA + F
Sbjct: 348 -------------TVGYMAPEVVKNERYTF--SPDWWALGCLLYEMIAGQSPF 385
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 56/208 (26%)
Query: 154 NVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLG 213
++++VP E +M+ ++ Q+A +E+L S + IHR ++ N+L+T N K+
Sbjct: 145 DINRVPEE----QMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIA 199
Query: 214 GFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELV-------RSKTNS 266
FG A D +N+ + LP++ + APE + +S S
Sbjct: 200 DFGLA-------RDINNIDXXK----KTTNGRLPVK----WMAPEALFDRVYTHQSDVWS 244
Query: 267 FGC-SSDIFSFGCVAYHLIARKPLF-------------DCNNNVKMYMNTLTYLSSDAFS 312
FG +IF+ G Y I + LF +C N + M M D +
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR-------DCWH 297
Query: 313 SIPS------DLVPDLQKM--LSANESF 332
++PS LV DL ++ L+ NE +
Sbjct: 298 AVPSQRPTFKQLVEDLDRILTLTTNEEY 325
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 108/256 (42%), Gaps = 42/256 (16%)
Query: 86 EARARAGLTKSAEDAFLDLVRA----DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPL 141
E A A K+ ++ D VR +A + + HP IV ++ + EN + M L
Sbjct: 35 ENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTL 94
Query: 142 FASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPEN 201
L +F V K +L L + Q++ +L +L S R +HR I+ N
Sbjct: 95 -----GELRSFLQVRKFSLDLASLILYAY-------QLSTALAYLESK-RFVHRDIAARN 141
Query: 202 ILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVR 261
+L+++ KLG FG + + + DS+ Y LP++ + APE +
Sbjct: 142 VLVSATDCVKLGDFGLS----RYMEDSTY--------YKASKGKLPIK----WMAPESIN 185
Query: 262 SKTNSFGCSSDIFSFGCVAYHLIAR--KPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLV 319
+ F +SD++ FG + ++ KP NN + + + + +P +
Sbjct: 186 FR--RFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIENGERLPMPPNCP 238
Query: 320 PDLQKMLSANESFRPT 335
P L +++ ++ P+
Sbjct: 239 PTLYSLMTKCWAYDPS 254
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 20/145 (13%)
Query: 162 LKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAIST 221
LK +S + + L QI L+++HS A ++HR + P N+L+ + K+ FG A
Sbjct: 118 LKTQHLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTSDLKICDFGLA--- 173
Query: 222 DQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAY 281
++D + EY + Y APE++ + + + S DI+S GC+
Sbjct: 174 --RVADPDHDHTGFLTEY---------VATRWYRAPEIMLN-SKGYTKSIDIWSVGCILA 221
Query: 282 HLIARKPLFDCNNNVKMYMNTLTYL 306
+++ +P+F K Y++ L ++
Sbjct: 222 EMLSNRPIFPG----KHYLDQLNHI 242
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 106/251 (42%), Gaps = 52/251 (20%)
Query: 39 YELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLTKSAE 98
YEL + IG +S R + R+ Q V ++D +++ + GL S E
Sbjct: 26 YELCEVIGKGA-------FSVVRRCINRETGQ--QFAVKIVD---VAKFTSSPGL--STE 71
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKV 158
D ++ +A L+HP IV +++ + + MV E F A++ FE V
Sbjct: 72 D-----LKREASICHMLKHPHIVELLETYSSD-GMLYMVFE--FMDGADLC--FEIVK-- 119
Query: 159 PRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITS---NGAWKLGGF 215
R G S H + QI E+L + H N +IHR + PEN+L+ S + KLG F
Sbjct: 120 -RADAGFVYSEAVASHYMRQILEALRYCHDN-NIIHRDVKPENVLLASKENSAPVKLGDF 177
Query: 216 GFAIS-TDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIF 274
G AI + + V H + APE+V K +G D++
Sbjct: 178 GVAIQLGESGLVAGGRVGTPH------------------FMAPEVV--KREPYGKPVDVW 217
Query: 275 SFGCVAYHLIA 285
G + + L++
Sbjct: 218 GCGVILFILLS 228
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 56/208 (26%)
Query: 154 NVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLG 213
++++VP E +M+ ++ Q+A +E+L S + IHR ++ N+L+T N K+
Sbjct: 145 DINRVPEE----QMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIA 199
Query: 214 GFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELV-------RSKTNS 266
FG A D +N+ + LP++ + APE + +S S
Sbjct: 200 DFGLA-------RDINNIDXXK----KTTNGRLPVK----WMAPEALFDRVYTHQSDVWS 244
Query: 267 FGC-SSDIFSFGCVAYHLIARKPLF-------------DCNNNVKMYMNTLTYLSSDAFS 312
FG +IF+ G Y I + LF +C N + M M D +
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR-------DCWH 297
Query: 313 SIPS------DLVPDLQKM--LSANESF 332
++PS LV DL ++ L+ NE +
Sbjct: 298 AVPSQRPTFKQLVEDLDRILTLTTNEEY 325
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 20/145 (13%)
Query: 162 LKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAIST 221
LK +S + + L QI L+++HS A ++HR + P N+L+ + K+ FG A
Sbjct: 116 LKTQHLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTXDLKICDFGLA--- 171
Query: 222 DQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAY 281
++D + EY + Y APE++ + + + S DI+S GC+
Sbjct: 172 --RVADPDHDHTGFLTEY---------VATRWYRAPEIMLN-SKGYTKSIDIWSVGCILA 219
Query: 282 HLIARKPLFDCNNNVKMYMNTLTYL 306
+++ +P+F K Y++ L ++
Sbjct: 220 EMLSNRPIFPG----KHYLDQLNHI 240
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 87/201 (43%), Gaps = 54/201 (26%)
Query: 154 NVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLG 213
++++VP E +M+ ++ Q+A +E+L S + IHR ++ N+L+T N ++
Sbjct: 145 DINRVPEE----QMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMRIA 199
Query: 214 GFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELV-------RSKTNS 266
FG A D +N+ + + LP++ + APE + +S S
Sbjct: 200 DFGLA-------RDINNIDYYK----KTTNGRLPVK----WMAPEALFDRVYTHQSDVWS 244
Query: 267 FGC-SSDIFSFGCVAYHLIARKPLF-------------DCNNNVKMYMNTLTYLSSDAFS 312
FG +IF+ G Y I + LF +C N + M M D +
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR-------DCWH 297
Query: 313 SIPS------DLVPDLQKMLS 327
++PS LV DL ++L+
Sbjct: 298 AVPSQRPTFKQLVEDLDRILT 318
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 96/209 (45%), Gaps = 38/209 (18%)
Query: 90 RAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVL 149
+AG T FL ++A + + HP I+H+ + + K M ++TE +
Sbjct: 45 KAGYTDKQRRDFL----SEASIMGQFDHPNIIHLEGVVTKCKPVM-IITEYM-------- 91
Query: 150 GNFENVS--KVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSN 207
EN S R+ G +++++ L I +++L S+ +HR ++ NIL+ SN
Sbjct: 92 ---ENGSLDAFLRKNDG-RFTVIQLVGMLRGIGSGMKYL-SDMSYVHRDLAARNILVNSN 146
Query: 208 GAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSF 267
K+ FG + + + D A Y +P++ +TAPE + + F
Sbjct: 147 LVCKVSDFGMS----RVLEDDPE------AAYTTRGGKIPIR----WTAPEAIAYR--KF 190
Query: 268 GCSSDIFSFGCVAYHLI--ARKPLFDCNN 294
+SD++S+G V + ++ +P +D +N
Sbjct: 191 TSASDVWSYGIVMWEVMSYGERPYWDMSN 219
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 20/145 (13%)
Query: 162 LKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAIST 221
LK +S + + L QI L+++HS A ++HR + P N+L+ + K+ FG A
Sbjct: 116 LKTQHLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTXDLKICDFGLA--- 171
Query: 222 DQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAY 281
++D + EY + Y APE++ + + + S DI+S GC+
Sbjct: 172 --RVADPDHDHTGFLTEY---------VATRWYRAPEIMLN-SKGYTKSIDIWSVGCILA 219
Query: 282 HLIARKPLFDCNNNVKMYMNTLTYL 306
+++ +P+F K Y++ L ++
Sbjct: 220 EMLSNRPIFPG----KHYLDQLNHI 240
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 96/209 (45%), Gaps = 38/209 (18%)
Query: 90 RAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVL 149
+AG T FL ++A + + HP I+H+ + + K M ++TE +
Sbjct: 51 KAGYTDKQRRDFL----SEASIMGQFDHPNIIHLEGVVTKCKPVM-IITEYM-------- 97
Query: 150 GNFENVS--KVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSN 207
EN S R+ G +++++ L I +++L S+ +HR ++ NIL+ SN
Sbjct: 98 ---ENGSLDAFLRKNDG-RFTVIQLVGMLRGIGSGMKYL-SDMSYVHRDLAARNILVNSN 152
Query: 208 GAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSF 267
K+ FG + + + D A Y +P++ +TAPE + + F
Sbjct: 153 LVCKVSDFGMS----RVLEDDPE------AAYTTRGGKIPIR----WTAPEAIAYR--KF 196
Query: 268 GCSSDIFSFGCVAYHLI--ARKPLFDCNN 294
+SD++S+G V + ++ +P +D +N
Sbjct: 197 TSASDVWSYGIVMWEVMSYGERPYWDMSN 225
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 39/199 (19%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ Q+ L+++HS A +IHR + P N+ + + ++ FG A D+ ++ +
Sbjct: 129 VYQLLRGLKYIHS-AGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRW-- 185
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF---DC 292
Y APE++ + + + + DI+S GC+ L+ K LF D
Sbjct: 186 ------------------YRAPEIMLNWMH-YNQTVDIWSVGCIMAELLQGKALFPGSDY 226
Query: 293 NNNVKMYMNTLTYLSSDAFSSIPSD--------LVPDLQKMLSANESFR---PTAMDFTG 341
+ +K M + S + + I S+ L P QK LS+ FR P A+D G
Sbjct: 227 IDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSS--IFRGANPLAIDLLG 284
Query: 342 SRFFRD-DTRLRALRFLDH 359
D D R+ A L H
Sbjct: 285 RMLVLDSDQRVSAAEALAH 303
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 20/145 (13%)
Query: 162 LKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAIST 221
LK +S + + L QI L+++HS A ++HR + P N+L+ + K+ FG A
Sbjct: 120 LKTQHLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTXDLKICDFGLA--- 175
Query: 222 DQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAY 281
++D + EY + Y APE++ + + + S DI+S GC+
Sbjct: 176 --RVADPDHDHTGFLTEY---------VATRWYRAPEIMLN-SKGYTKSIDIWSVGCILA 223
Query: 282 HLIARKPLFDCNNNVKMYMNTLTYL 306
+++ +P+F K Y++ L ++
Sbjct: 224 EMLSNRPIFPG----KHYLDQLNHI 244
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 97/209 (46%), Gaps = 38/209 (18%)
Query: 90 RAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVL 149
+AG T+ FL ++A + + HP I+ + + + AM +VTE +
Sbjct: 86 KAGYTERQRRDFL----SEASIMGQFDHPNIIRLEGVVTRGRLAM-IVTEYM-------- 132
Query: 150 GNFENVS--KVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSN 207
EN S R G + +++++ L + + +L S+ +HR ++ N+L+ SN
Sbjct: 133 ---ENGSLDTFLRTHDG-QFTIMQLVGMLRGVGAGMRYL-SDLGYVHRDLAARNVLVDSN 187
Query: 208 GAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSF 267
K+ FG + + + D + A Y +P++ +TAPE + +T F
Sbjct: 188 LVCKVSDFGLS----RVLEDDPD------AAYTTTGGKIPIR----WTAPEAIAFRT--F 231
Query: 268 GCSSDIFSFGCVAYHLIA--RKPLFDCNN 294
+SD++SFG V + ++A +P ++ N
Sbjct: 232 SSASDVWSFGVVMWEVLAYGERPYWNMTN 260
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 44/231 (19%)
Query: 115 LRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGN---FENVSKVPRELKGLEMSLLE 171
L+HP IV + ++ E E V +++ FE++ V RE S +
Sbjct: 60 LKHPNIVRLHDSISE---------EGFHYLVFDLVTGGELFEDI--VAREY----YSEAD 104
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITS---NGAWKLGGFGFAISTDQAISDS 228
H + QI ES+ H N ++HR + PEN+L+ S A KL FG AI
Sbjct: 105 ASHCIQQILESVNHCHLNG-IVHRDLKPENLLLASKSKGAAVKLADFGLAIEV------Q 157
Query: 229 SNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKP 288
+ QA+ + Y +PE++R + +G D+++ G + Y L+ P
Sbjct: 158 GDQQAW-----------FGFAGTPGYLSPEVLRK--DPYGKPVDMWACGVILYILLVGYP 204
Query: 289 LFDCNNNVKMY--MNTLTY-LSSDAFSSIPSDLVPDLQKMLSANESFRPTA 336
F + ++Y + Y S + ++ + + KML+ N + R TA
Sbjct: 205 PFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITA 255
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 149 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 190
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 191 ---VKGRTWXLXGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 246 IYEKIVS-----GKVRFPSHFSSDLKDLL 269
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 20/145 (13%)
Query: 162 LKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAIST 221
LK +S + + L QI L+++HS A ++HR + P N+L+ + K+ FG A
Sbjct: 116 LKTQHLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLA--- 171
Query: 222 DQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAY 281
++D + EY + Y APE++ + + + S DI+S GC+
Sbjct: 172 --RVADPDHDHTGFLTEY---------VATRWYRAPEIMLN-SKGYTKSIDIWSVGCILA 219
Query: 282 HLIARKPLFDCNNNVKMYMNTLTYL 306
+++ +P+F K Y++ L ++
Sbjct: 220 EMLSNRPIFPG----KHYLDQLNHI 240
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 20/145 (13%)
Query: 162 LKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAIST 221
LK +S + + L QI L+++HS A ++HR + P N+L+ + K+ FG A
Sbjct: 124 LKTQHLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLA--- 179
Query: 222 DQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAY 281
++D + EY + Y APE++ + + + S DI+S GC+
Sbjct: 180 --RVADPDHDHTGFLTEY---------VATRWYRAPEIMLN-SKGYTKSIDIWSVGCILA 227
Query: 282 HLIARKPLFDCNNNVKMYMNTLTYL 306
+++ +P+F K Y++ L ++
Sbjct: 228 EMLSNRPIFPG----KHYLDQLNHI 248
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 20/145 (13%)
Query: 162 LKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAIST 221
LK +S + + L QI L+++HS A ++HR + P N+L+ + K+ FG A
Sbjct: 116 LKTQHLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLA--- 171
Query: 222 DQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAY 281
++D + EY + Y APE++ + + + S DI+S GC+
Sbjct: 172 --RVADPDHDHTGFLTEY---------VATRWYRAPEIMLN-SKGYTKSIDIWSVGCILA 219
Query: 282 HLIARKPLFDCNNNVKMYMNTLTYL 306
+++ +P+F K Y++ L ++
Sbjct: 220 EMLSNRPIFPG----KHYLDQLNHI 240
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 44/231 (19%)
Query: 115 LRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGN---FENVSKVPRELKGLEMSLLE 171
L+HP IV + ++ E E V +++ FE++ V RE S +
Sbjct: 60 LKHPNIVRLHDSISE---------EGFHYLVFDLVTGGELFEDI--VAREY----YSEAD 104
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITS---NGAWKLGGFGFAISTDQAISDS 228
H + QI ES+ H N ++HR + PEN+L+ S A KL FG AI
Sbjct: 105 ASHCIQQILESVNHCHLNG-IVHRDLKPENLLLASKSKGAAVKLADFGLAIEV------Q 157
Query: 229 SNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKP 288
+ QA+ + Y +PE++R + +G D+++ G + Y L+ P
Sbjct: 158 GDQQAW-----------FGFAGTPGYLSPEVLRK--DPYGKPVDMWACGVILYILLVGYP 204
Query: 289 LFDCNNNVKMY--MNTLTY-LSSDAFSSIPSDLVPDLQKMLSANESFRPTA 336
F + ++Y + Y S + ++ + + KML+ N + R TA
Sbjct: 205 PFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITA 255
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 28/184 (15%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
+E+ M + L Q+ ++ LHS A +IHR + P NI++ S+ K+ FG A + +
Sbjct: 121 MELDHERMSYLLYQMLVGIKHLHS-AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
M P + Y APE++ + + DI+S GC+ +I
Sbjct: 180 F------------------MMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMI 219
Query: 285 ARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPS-DLVPDLQKMLSANESFRPTAMDFTGSR 343
LF +++ + + L + PS + + LQ + RP ++ +
Sbjct: 220 KGGVLFPGTDHIDQWNKVIEQLGT------PSPEFMKKLQPTVRTYVENRPKYAGYSFEK 273
Query: 344 FFRD 347
F D
Sbjct: 274 LFPD 277
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 149 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 190
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 191 ---VKGRTWXLAGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 246 IYEKIVS-----GKVRFPSHFSSDLKDLL 269
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 20/145 (13%)
Query: 162 LKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAIST 221
LK +S + + L QI L+++HS A ++HR + P N+L+ + K+ FG A
Sbjct: 118 LKTQHLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLA--- 173
Query: 222 DQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAY 281
++D + EY + Y APE++ + + + S DI+S GC+
Sbjct: 174 --RVADPDHDHTGFLTEY---------VATRWYRAPEIMLN-SKGYTKSIDIWSVGCILA 221
Query: 282 HLIARKPLFDCNNNVKMYMNTLTYL 306
+++ +P+F K Y++ L ++
Sbjct: 222 EMLSNRPIFPG----KHYLDQLNHI 242
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 20/145 (13%)
Query: 162 LKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAIST 221
LK +S + + L QI L+++HS A ++HR + P N+L+ + K+ FG A
Sbjct: 120 LKTQHLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTXDLKICDFGLA--- 175
Query: 222 DQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAY 281
++D + EY + Y APE++ + + + S DI+S GC+
Sbjct: 176 --RVADPDHDHTGFLTEY---------VATRWYRAPEIMLN-SKGYTKSIDIWSVGCILA 223
Query: 282 HLIARKPLFDCNNNVKMYMNTLTYL 306
+++ +P+F K Y++ L ++
Sbjct: 224 EMLSNRPIFPG----KHYLDQLNHI 244
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 86/220 (39%), Gaps = 37/220 (16%)
Query: 179 IAESLEFLHSNARLIHRAISPENILITS---NGAWKLGGFGFAISTDQAISDSSNVQAFH 235
I +++FLHS+ + HR + PEN+L TS + KL FGFA T Q + +Q
Sbjct: 137 IGTAIQFLHSH-NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ-----NALQTPC 190
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
Y Y Y APE++ + C D++S G + Y L+ P F N
Sbjct: 191 YTPY--------------YVAPEVLGPEKYDKSC--DMWSLGVIMYILLCGFPPFYSNTG 234
Query: 296 --VKMYMNTLTYLSSDAF-----SSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFFRD- 347
+ M L F S + D ++ +L + + R T F +
Sbjct: 235 QAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS 294
Query: 348 ----DTRLRALRFLDHMLERDNMQKSEFLKALSDMWKDFD 383
T L R L + + K E AL+ M D+D
Sbjct: 295 MVVPQTPLHTARVLQEDKDHWDEVKEEMTSALATMRVDYD 334
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 20/145 (13%)
Query: 162 LKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAIST 221
LK +S + + L QI L+++HS A ++HR + P N+L+ + K+ FG A
Sbjct: 121 LKTQHLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLA--- 176
Query: 222 DQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAY 281
++D + EY + Y APE++ + + + S DI+S GC+
Sbjct: 177 --RVADPDHDHTGFLTEY---------VATRWYRAPEIMLN-SKGYTKSIDIWSVGCILA 224
Query: 282 HLIARKPLFDCNNNVKMYMNTLTYL 306
+++ +P+F K Y++ L ++
Sbjct: 225 EMLSNRPIFPG----KHYLDQLNHI 245
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 20/145 (13%)
Query: 162 LKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAIST 221
LK +S + + L QI L+++HS A ++HR + P N+L+ + K+ FG A
Sbjct: 122 LKTQHLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLA--- 177
Query: 222 DQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAY 281
++D + EY + Y APE++ + + + S DI+S GC+
Sbjct: 178 --RVADPDHDHTGFLTEY---------VATRWYRAPEIMLN-SKGYTKSIDIWSVGCILA 225
Query: 282 HLIARKPLFDCNNNVKMYMNTLTYL 306
+++ +P+F K Y++ L ++
Sbjct: 226 EMLSNRPIFPG----KHYLDQLNHI 246
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 20/145 (13%)
Query: 162 LKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAIST 221
LK +S + + L QI L+++HS A ++HR + P N+L+ + K+ FG A
Sbjct: 113 LKTQHLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLA--- 168
Query: 222 DQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAY 281
++D + EY + Y APE++ + + + S DI+S GC+
Sbjct: 169 --RVADPDHDHTGFLTEY---------VATRWYRAPEIMLN-SKGYTKSIDIWSVGCILA 216
Query: 282 HLIARKPLFDCNNNVKMYMNTLTYL 306
+++ +P+F K Y++ L ++
Sbjct: 217 EMLSNRPIFPG----KHYLDQLNHI 237
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 20/145 (13%)
Query: 162 LKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAIST 221
LK +S + + L QI L+++HS A ++HR + P N+L+ + K+ FG A
Sbjct: 120 LKTQHLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLA--- 175
Query: 222 DQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAY 281
++D + EY + Y APE++ + + + S DI+S GC+
Sbjct: 176 --RVADPDHDHTGFLTEY---------VATRWYRAPEIMLN-SKGYTKSIDIWSVGCILA 223
Query: 282 HLIARKPLFDCNNNVKMYMNTLTYL 306
+++ +P+F K Y++ L ++
Sbjct: 224 EMLSNRPIFPG----KHYLDQLNHI 244
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 20/145 (13%)
Query: 162 LKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAIST 221
LK +S + + L QI L+++HS A ++HR + P N+L+ + K+ FG A
Sbjct: 118 LKTQHLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLA--- 173
Query: 222 DQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAY 281
++D + EY + Y APE++ + + + S DI+S GC+
Sbjct: 174 --RVADPDHDHTGFLTEY---------VATRWYRAPEIMLN-SKGYTKSIDIWSVGCILA 221
Query: 282 HLIARKPLFDCNNNVKMYMNTLTYL 306
+++ +P+F K Y++ L ++
Sbjct: 222 EMLSNRPIFPG----KHYLDQLNHI 242
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 75/183 (40%), Gaps = 26/183 (14%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
+E+ M + L Q+ ++ LHS A +IHR + P NI++ S+ K+ FG A + +
Sbjct: 123 MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 181
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
M+P + Y APE++ + + DI+S GC+ +I
Sbjct: 182 F------------------MMVPFVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMI 221
Query: 285 ARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRF 344
LF +++ + + L + + + LQ + RP ++ +
Sbjct: 222 KGGVLFPGTDHIDQWNKVIEQLGTPC-----PEFMKKLQPTVRTYVENRPKYAGYSFEKL 276
Query: 345 FRD 347
F D
Sbjct: 277 FPD 279
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 20/145 (13%)
Query: 162 LKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAIST 221
LK +S + + L QI L+++HS A ++HR + P N+L+ + K+ FG A
Sbjct: 114 LKTQHLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLA--- 169
Query: 222 DQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAY 281
++D + EY + Y APE++ + + + S DI+S GC+
Sbjct: 170 --RVADPDHDHTGFLTEY---------VATRWYRAPEIMLN-SKGYTKSIDIWSVGCILA 217
Query: 282 HLIARKPLFDCNNNVKMYMNTLTYL 306
+++ +P+F K Y++ L ++
Sbjct: 218 EMLSNRPIFPG----KHYLDQLNHI 238
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 20/145 (13%)
Query: 162 LKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAIST 221
LK +S + + L QI L+++HS A ++HR + P N+L+ + K+ FG A
Sbjct: 114 LKTQHLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLA--- 169
Query: 222 DQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAY 281
++D + EY + Y APE++ + + + S DI+S GC+
Sbjct: 170 --RVADPDHDHTGFLTEY---------VATRWYRAPEIMLN-SKGYTKSIDIWSVGCILA 217
Query: 282 HLIARKPLFDCNNNVKMYMNTLTYL 306
+++ +P+F K Y++ L ++
Sbjct: 218 EMLSNRPIFPG----KHYLDQLNHI 238
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 20/145 (13%)
Query: 162 LKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAIST 221
LK +S + + L QI L+++HS A ++HR + P N+L+ + K+ FG A
Sbjct: 120 LKTQHLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLA--- 175
Query: 222 DQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAY 281
++D + EY + Y APE++ + + + S DI+S GC+
Sbjct: 176 --RVADPDHDHTGFLTEY---------VATRWYRAPEIMLN-SKGYTKSIDIWSVGCILA 223
Query: 282 HLIARKPLFDCNNNVKMYMNTLTYL 306
+++ +P+F K Y++ L ++
Sbjct: 224 EMLSNRPIFPG----KHYLDQLNHI 244
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 20/145 (13%)
Query: 162 LKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAIST 221
LK +S + + L QI L+++HS A ++HR + P N+L+ + K+ FG A
Sbjct: 136 LKTQHLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLA--- 191
Query: 222 DQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAY 281
++D + EY + Y APE++ + + + S DI+S GC+
Sbjct: 192 --RVADPDHDHTGFLTEY---------VATRWYRAPEIMLN-SKGYTKSIDIWSVGCILA 239
Query: 282 HLIARKPLFDCNNNVKMYMNTLTYL 306
+++ +P+F K Y++ L ++
Sbjct: 240 EMLSNRPIFPG----KHYLDQLNHI 260
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 20/145 (13%)
Query: 162 LKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAIST 221
LK +S + + L QI L+++HS A ++HR + P N+L+ + K+ FG A
Sbjct: 120 LKCQHLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLA--- 175
Query: 222 DQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAY 281
++D + EY + Y APE++ + + + S DI+S GC+
Sbjct: 176 --RVADPDHDHTGFLTEY---------VATRWYRAPEIMLN-SKGYTKSIDIWSVGCILA 223
Query: 282 HLIARKPLFDCNNNVKMYMNTLTYL 306
+++ +P+F K Y++ L ++
Sbjct: 224 EMLSNRPIFPG----KHYLDQLNHI 244
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 96/209 (45%), Gaps = 38/209 (18%)
Query: 90 RAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVL 149
+AG T FL ++A + + HP I+H+ + + K M ++TE +
Sbjct: 66 KAGYTDKQRRDFL----SEASIMGQFDHPNIIHLEGVVTKCKPVM-IITEYM-------- 112
Query: 150 GNFENVS--KVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSN 207
EN S R+ G +++++ L I +++L S+ +HR ++ NIL+ SN
Sbjct: 113 ---ENGSLDAFLRKNDG-RFTVIQLVGMLRGIGSGMKYL-SDMSAVHRDLAARNILVNSN 167
Query: 208 GAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSF 267
K+ FG + + + D A Y +P++ +TAPE + + F
Sbjct: 168 LVCKVSDFGMS----RVLEDDPE------AAYTTRGGKIPIR----WTAPEAIAYR--KF 211
Query: 268 GCSSDIFSFGCVAYHLI--ARKPLFDCNN 294
+SD++S+G V + ++ +P +D +N
Sbjct: 212 TSASDVWSYGIVMWEVMSYGERPYWDMSN 240
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 37/199 (18%)
Query: 112 LVRLRHPGIVHVVQAMD----ENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEM 167
L+R RH I+ + + E + +VT + A + +L K +
Sbjct: 95 LLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLL-------------KTQHL 141
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
S + + L QI L+++HS A ++HR + P N+L+ + K+ FG A ++D
Sbjct: 142 SNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTXDLKICDFGLA-----RVAD 195
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARK 287
+ EY + Y APE++ + + + S DI+S GC+ +++ +
Sbjct: 196 PDHDHTGFLTEY---------VATRWYRAPEIMLN-SKGYTKSIDIWSVGCILAEMLSNR 245
Query: 288 PLFDCNNNVKMYMNTLTYL 306
P+F K Y++ L ++
Sbjct: 246 PIFPG----KHYLDQLNHI 260
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 170 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 211
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ + L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 212 ---VKGATWTLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 266
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 267 IYEKIVS-----GKVRFPSHFSSDLKDLL 290
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 86/220 (39%), Gaps = 37/220 (16%)
Query: 179 IAESLEFLHSNARLIHRAISPENILITS---NGAWKLGGFGFAISTDQAISDSSNVQAFH 235
I +++FLHS+ + HR + PEN+L TS + KL FGFA T Q + +Q
Sbjct: 118 IGTAIQFLHSH-NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ-----NALQTPC 171
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
Y Y Y APE++ + C D++S G + Y L+ P F N
Sbjct: 172 YTPY--------------YVAPEVLGPEKYDKSC--DMWSLGVIMYILLCGFPPFYSNTG 215
Query: 296 --VKMYMNTLTYLSSDAF-----SSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFFRD- 347
+ M L F S + D ++ +L + + R T F +
Sbjct: 216 QAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS 275
Query: 348 ----DTRLRALRFLDHMLERDNMQKSEFLKALSDMWKDFD 383
T L R L + + K E AL+ M D+D
Sbjct: 276 MVVPQTPLHTARVLQEDKDHWDEVKEEMTSALATMRVDYD 315
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 32/177 (18%)
Query: 179 IAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAE 238
+ E++ FLH+N ++HR + PENIL+ N +L FGF+ +
Sbjct: 209 LLEAVSFLHAN-NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPG-------------- 253
Query: 239 YDVEDSMLPLQPSLNYTAPELVRSKTN----SFGCSSDIFSFGCVAYHLIARKPLFDCNN 294
+ + L + Y APE+++ + +G D+++ G + + L+A P F
Sbjct: 254 ----EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR 309
Query: 295 NV---KMYMNTLTYLSS---DAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFF 345
+ +M M SS D SS DL+ ++L + R TA FF
Sbjct: 310 QILMLRMIMEGQYQFSSPEWDDRSSTVKDLI---SRLLQVDPEARLTAEQALQHPFF 363
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN++I G K+ FGFA
Sbjct: 149 QIVLTFEYLHS-LDLIYRDLKPENLMIDQQGYIKVTDFGFAKR----------------- 190
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 191 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 246 IYEKIVS-----GKVRFPSHFSSDLKDLL 269
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 68/177 (38%), Gaps = 34/177 (19%)
Query: 115 LRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKH 174
LRHP I+ + + K M+ FA + + + + M
Sbjct: 71 LRHPNILRMYNYFHDRKRIYLMLE---FAPRGELYKELQKHGRFDEQRSATFME------ 121
Query: 175 GLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAF 234
++A++L + H ++IHR I PEN+L+ G K+ FG+++
Sbjct: 122 ---ELADALHYCHER-KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX------ 171
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
+ +L+Y PE++ KT+ D++ G + Y + P FD
Sbjct: 172 -------------MCGTLDYLPPEMIEGKTHD--EKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN++I G K+ FGFA
Sbjct: 150 QIVLTFEYLHS-LDLIYRDLKPENLMIDQQGYIKVTDFGFAKR----------------- 191
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 192 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 247 IYEKIVS-----GKVRFPSHFSSDLKDLL 270
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN++I G K+ FGFA
Sbjct: 150 QIVLTFEYLHS-LDLIYRDLKPENLMIDQQGYIKVTDFGFAKR----------------- 191
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 192 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 247 IYEKIVS-----GKVRFPSHFSSDLKDLL 270
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 69/145 (47%), Gaps = 20/145 (13%)
Query: 162 LKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAIST 221
LK +S + + L QI L+++HS A ++HR + P N+L+ + K+ FG A
Sbjct: 120 LKTQHLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 178
Query: 222 DQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAY 281
D ++D + + Y APE++ + + + S DI+S GC+
Sbjct: 179 D--------------PDHDHTGFLXEXVATRWYRAPEIMLN-SKGYTKSIDIWSVGCILA 223
Query: 282 HLIARKPLFDCNNNVKMYMNTLTYL 306
+++ +P+F K Y++ L ++
Sbjct: 224 EMLSNRPIFPG----KHYLDQLNHI 244
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN++I G K+ FGFA
Sbjct: 150 QIVLTFEYLHS-LDLIYRDLKPENLMIDQQGYIKVTDFGFAKR----------------- 191
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 192 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 247 IYEKIVS-----GKVRFPSHFSSDLKDLL 270
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 69/145 (47%), Gaps = 20/145 (13%)
Query: 162 LKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAIST 221
LK +S + + L QI L+++HS A ++HR + P N+L+ + K+ FG A
Sbjct: 121 LKTQHLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 179
Query: 222 DQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAY 281
D ++D + + Y APE++ + + + S DI+S GC+
Sbjct: 180 D--------------PDHDHTGFLXEXVATRWYRAPEIMLN-SKGYTKSIDIWSVGCILA 224
Query: 282 HLIARKPLFDCNNNVKMYMNTLTYL 306
+++ +P+F K Y++ L ++
Sbjct: 225 EMLSNRPIFPG----KHYLDQLNHI 245
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 26/183 (14%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
+E+ M + L Q+ ++ LHS A +IHR + P NI++ S+ K+ FG A + +
Sbjct: 121 MELDHERMSYLLYQMLXGIKHLHS-AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 179
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
M P + Y APE++ + + DI+S GC+ ++
Sbjct: 180 F------------------MMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMV 219
Query: 285 ARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRF 344
K LF + + + + L + + + LQ + RP T +
Sbjct: 220 RHKILFPGRDYIDQWNKVIEQLGTPC-----PEFMKKLQPTVRNYVENRPKYAGLTFPKL 274
Query: 345 FRD 347
F D
Sbjct: 275 FPD 277
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 68/177 (38%), Gaps = 34/177 (19%)
Query: 115 LRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKH 174
LRHP I+ + + K M+ FA + + + + M
Sbjct: 71 LRHPNILRMYNYFHDRKRIYLMLE---FAPRGELYKELQKHGRFDEQRSATFME------ 121
Query: 175 GLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAF 234
++A++L + H ++IHR I PEN+L+ G K+ FG+++
Sbjct: 122 ---ELADALHYCHER-KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX------ 171
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
+ +L+Y PE++ KT+ D++ G + Y + P FD
Sbjct: 172 -------------MCGTLDYLPPEMIEGKTHD--EKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN++I G K+ FGFA
Sbjct: 149 QIVLTFEYLHS-LDLIYRDLKPENLMIDQQGYIKVTDFGFAKR----------------- 190
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 191 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 246 IYEKIVS-----GKVRFPSHFSSDLKDLL 269
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN++I G K+ FGFA
Sbjct: 150 QIVLTFEYLHS-LDLIYRDLKPENLMIDQQGYIKVTDFGFAKR----------------- 191
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 192 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 247 IYEKIVS-----GKVRFPSHFSSDLKDLL 270
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 107/251 (42%), Gaps = 52/251 (20%)
Query: 39 YELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLTKSAE 98
YEL + IG GP +S R + R+ Q V ++D +++ + GL S E
Sbjct: 26 YELCEVIGK-GP------FSVVRRCINRETGQ--QFAVKIVD---VAKFTSSPGL--STE 71
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKV 158
D ++ +A L+HP IV +++ + + MV E F A++ FE V
Sbjct: 72 D-----LKREASICHMLKHPHIVELLETYSSD-GMLYMVFE--FMDGADLC--FEIVK-- 119
Query: 159 PRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITS---NGAWKLGGF 215
R G S H + QI E+L + H N +IHR + P +L+ S + KLGGF
Sbjct: 120 -RADAGFVYSEAVASHYMRQILEALRYCHDN-NIIHRDVKPHCVLLASKENSAPVKLGGF 177
Query: 216 GFAIS-TDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIF 274
G AI + + V H + APE+V K +G D++
Sbjct: 178 GVAIQLGESGLVAGGRVGTPH------------------FMAPEVV--KREPYGKPVDVW 217
Query: 275 SFGCVAYHLIA 285
G + + L++
Sbjct: 218 GCGVILFILLS 228
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 108/256 (42%), Gaps = 42/256 (16%)
Query: 86 EARARAGLTKSAEDAFLDLVRA----DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPL 141
E A A K+ ++ D VR +A + + HP IV ++ + EN + M L
Sbjct: 415 ENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTL 474
Query: 142 FASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPEN 201
L +F V K +L L + Q++ +L +L S R +HR I+ N
Sbjct: 475 -----GELRSFLQVRKFSLDLASLILYAY-------QLSTALAYLESK-RFVHRDIAARN 521
Query: 202 ILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVR 261
+L+++ KLG FG + + + DS+ Y LP++ + APE +
Sbjct: 522 VLVSATDCVKLGDFGLS----RYMEDSTY--------YKASKGKLPIK----WMAPESIN 565
Query: 262 SKTNSFGCSSDIFSFGCVAYHLIAR--KPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLV 319
+ F +SD++ FG + ++ KP NN + + + + +P +
Sbjct: 566 FR--RFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIENGERLPMPPNCP 618
Query: 320 PDLQKMLSANESFRPT 335
P L +++ ++ P+
Sbjct: 619 PTLYSLMTKCWAYDPS 634
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 28/184 (15%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
+E+ M + L Q+ ++ LHS A +IHR + P NI++ S+ K+ FG A + +
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
M P + Y APE++ + + DI+S GC+ +I
Sbjct: 180 F------------------MMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMI 219
Query: 285 ARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPS-DLVPDLQKMLSANESFRPTAMDFTGSR 343
LF +++ + + L + PS + + LQ + RP ++ +
Sbjct: 220 KGGVLFPGTDHIDQWNKVIEQLGT------PSPEFMKKLQPTVRTYVENRPKYAGYSFEK 273
Query: 344 FFRD 347
F D
Sbjct: 274 LFPD 277
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 28/184 (15%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
+E+ M + L Q+ ++ LHS A +IHR + P NI++ S+ K+ FG A + +
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
M P + Y APE++ + + DI+S GC+ +I
Sbjct: 180 F------------------MMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMI 219
Query: 285 ARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPS-DLVPDLQKMLSANESFRPTAMDFTGSR 343
LF +++ + + L + PS + + LQ + RP ++ +
Sbjct: 220 KGGVLFPGTDHIDQWNKVIEQLGT------PSPEFMKKLQPTVRTYVENRPKYAGYSFEK 273
Query: 344 FFRD 347
F D
Sbjct: 274 LFPD 277
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 68/177 (38%), Gaps = 34/177 (19%)
Query: 115 LRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKH 174
LRHP I+ + + K M+ FA + + + + M
Sbjct: 72 LRHPNILRMYNYFHDRKRIYLMLE---FAPRGELYKELQKHGRFDEQRSATFME------ 122
Query: 175 GLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAF 234
++A++L + H ++IHR I PEN+L+ G K+ FG+++
Sbjct: 123 ---ELADALHYCHER-KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX------ 172
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
+ +L+Y PE++ KT+ D++ G + Y + P FD
Sbjct: 173 -------------MCGTLDYLPPEMIEGKTHD--EKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 83/188 (44%), Gaps = 28/188 (14%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGN---FENVSKVPRELKGLEMS 168
L L+HP ++ + + + + + LF + L + F SK + K +++
Sbjct: 72 LRELKHPNVISLQKVFLSHADRKVWL---LFDYAEHDLWHIIKFHRASKANK--KPVQLP 126
Query: 169 LLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAW----KLGGFGFAISTDQA 224
+K L QI + + +LH+N ++HR + P NIL+ G K+ GFA +
Sbjct: 127 RGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 185
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
+ +++ P+ + Y APEL+ + + DI++ GC+ L+
Sbjct: 186 LKPLADLD--------------PVVVTFWYRAPELLLG-ARHYTKAIDIWAIGCIFAELL 230
Query: 285 ARKPLFDC 292
+P+F C
Sbjct: 231 TSEPIFHC 238
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 31/179 (17%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L+H IV + + K + +V E L + +L E GLE +
Sbjct: 54 LKELKHSNIVKLYDVI-HTKKRLVLVFEHLDQDLKKLLDVCEG---------GLES--VT 101
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K LLQ+ + + H + R++HR + P+N+LI G K+ FG A
Sbjct: 102 AKSFLLQLLNGIAYCH-DRRVLHRDLKPQNLLINREGELKIADFGLA------------- 147
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
+AF ++ +L Y AP+++ + + + DI+S GC+ ++ PLF
Sbjct: 148 RAFGIPVRKYTHEIV----TLWYRAPDVLMG-SKKYSTTIDIWSVGCIFAEMVNGTPLF 201
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 134/320 (41%), Gaps = 70/320 (21%)
Query: 24 ETTVQEVTGPKAL--QDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDK 81
ET+V GP+ + + +ELL +G G G +++ + + + + VL K
Sbjct: 4 ETSVNR--GPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGK------IFAMKVLKK 55
Query: 82 RALSEARARAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPL 141
A + ++A+D +A+ L ++HP IV ++ A + + ++ E
Sbjct: 56 ---------AMIVRNAKDT--AHTKAERNILEEVKHPFIVDLIYAF-QTGGKLYLILE-- 101
Query: 142 FASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPEN 201
L E ++ RE G+ M + L +I+ +L LH +I+R + PEN
Sbjct: 102 ------YLSGGELFMQLERE--GIFMEDTACFY-LAEISMALGHLHQKG-IIYRDLKPEN 151
Query: 202 ILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPE-LV 260
I++ G KL FG ++I D + F ++ Y APE L+
Sbjct: 152 IMLNHQGHVKLTDFGLC---KESIHDGTVTHTF--------------CGTIEYMAPEILM 194
Query: 261 RSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN-------VKMYMNTLTYLSSDAFSS 313
RS N + D +S G + Y ++ P F N +K +N YL+ +A
Sbjct: 195 RSGHNR---AVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEA--- 248
Query: 314 IPSDLVPDLQKMLSANESFR 333
DL L+K+L N + R
Sbjct: 249 --RDL---LKKLLKRNAASR 263
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 31/179 (17%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L+H IV + + K + +V E L + +L E GLE +
Sbjct: 54 LKELKHSNIVKLYDVI-HTKKRLVLVFEHLDQDLKKLLDVCEG---------GLES--VT 101
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K LLQ+ + + H + R++HR + P+N+LI G K+ FG A + + ++
Sbjct: 102 AKSFLLQLLNGIAYCH-DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE 160
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
+L Y AP+++ + + + DI+S GC+ ++ PLF
Sbjct: 161 VV-----------------TLWYRAPDVLMG-SKKYSTTIDIWSVGCIFAEMVNGTPLF 201
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 26/183 (14%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
+E+ M + L Q+ ++ LHS A +IHR + P NI++ S+ K+ FG A + +
Sbjct: 121 MELDHERMSYLLYQMLXGIKHLHS-AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 179
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
M P + Y APE++ + + DI+S GC+ ++
Sbjct: 180 F------------------MMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMV 219
Query: 285 ARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRF 344
K LF + + + + L + + + LQ + RP T +
Sbjct: 220 RHKILFPGRDYIDQWNKVIEQLGTPC-----PEFMKKLQPTVRNYVENRPKYAGLTFPKL 274
Query: 345 FRD 347
F D
Sbjct: 275 FPD 277
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 26/183 (14%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
+E+ M + L Q+ ++ LHS A +IHR + P NI++ S+ K+ FG A + +
Sbjct: 114 MELDHERMSYLLYQMLXGIKHLHS-AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 172
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
M P + Y APE++ + + DI+S GC+ ++
Sbjct: 173 F------------------MMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMV 212
Query: 285 ARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRF 344
K LF + + + + L + + + LQ + RP T +
Sbjct: 213 RHKILFPGRDYIDQWNKVIEQLGTPC-----PEFMKKLQPTVRNYVENRPKYAGLTFPKL 267
Query: 345 FRD 347
F D
Sbjct: 268 FPD 270
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 149 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 190
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 191 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 246 IYEKIVS-----GKVRFPSHFSSDLKDLL 269
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 149 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 190
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 191 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYQMAAGYPPFFADQPIQ 245
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 246 IYEKIVS-----GKVRFPSHFSSDLKDLL 269
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 144 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 185
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 186 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 240
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 241 IYEKIVS-----GKVRFPSHFSSDLKDLL 264
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 149 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 190
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 191 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 246 IYEKIVS-----GKVRFPSHFSSDLKDLL 269
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 149 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 190
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 191 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 246 IYEKIVS-----GKVRFPSHFSSDLKDLL 269
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 149 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 190
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 191 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 246 IYEKIVS-----GKVRFPSHFSSDLKDLL 269
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 149 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 190
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 191 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 246 IYEKIVS-----GKVRFPSHFSSDLKDLL 269
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 32/180 (17%)
Query: 115 LRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKH 174
L HP IV + + + E + + ++ E +AS V F+ + R M E +
Sbjct: 71 LNHPNIVKLFEVI-ETEKTLYLIME--YASGGEV---FDYLVAHGR------MKEKEARS 118
Query: 175 GLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAF 234
QI ++++ H R++HR + EN+L+ ++ K+ FGF+
Sbjct: 119 KFRQIVSAVQYCHQK-RIVHRDLKAENLLLDADMNIKIADFGFS---------------- 161
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNN 294
E+ V + + Y APEL + K G D++S G + Y L++ FD N
Sbjct: 162 --NEFTVGGKLDAFCGAPPYAAPELFQGKKYD-GPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 31/179 (17%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L+H IV + + K + +V E L + +L E GLE +
Sbjct: 54 LKELKHSNIVKLYDVI-HTKKRLVLVFEHLDQDLKKLLDVCEG---------GLES--VT 101
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
K LLQ+ + + H + R++HR + P+N+LI G K+ FG A + + ++
Sbjct: 102 AKSFLLQLLNGIAYCH-DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE 160
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
+L Y AP+++ + + + DI+S GC+ ++ PLF
Sbjct: 161 VV-----------------TLWYRAPDVLMG-SKKYSTTIDIWSVGCIFAEMVNGAPLF 201
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 149 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 190
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 191 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 246 IYEKIVS-----GKVRFPSHFSSDLKDLL 269
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 149 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 190
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 191 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 246 IYEKIVS-----GKVRFPSHFSSDLKDLL 269
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 115/274 (41%), Gaps = 58/274 (21%)
Query: 39 YELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLTKSAE 98
YEL + IG GP +S R + R+ Q V ++D +++ + GL S E
Sbjct: 28 YELCEVIGK-GP------FSVVRRCINRETGQ--QFAVKIVD---VAKFTSSPGL--STE 73
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKV 158
D ++ +A L+HP IV +++ + + MV E F A++ FE V
Sbjct: 74 D-----LKREASICHMLKHPHIVELLETYSSD-GMLYMVFE--FMDGADLC--FEIVK-- 121
Query: 159 PRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITS---NGAWKLGGF 215
R G S H + QI E+L + H N +IHR + P +L+ S + KLGGF
Sbjct: 122 -RADAGFVYSEAVASHYMRQILEALRYCHDN-NIIHRDVKPHCVLLASKENSAPVKLGGF 179
Query: 216 GFAIS-TDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSK-----TNSFGC 269
G AI + + V H + APE+V+ + + +GC
Sbjct: 180 GVAIQLGESGLVAGGRVGTPH------------------FMAPEVVKREPYGKPVDVWGC 221
Query: 270 SSDIFSF--GCVAYHLIARKPLFDCNNNVKMYMN 301
+F GC+ ++ + LF+ K MN
Sbjct: 222 GVILFILLSGCLPFYGTKER-LFEGIIKGKYKMN 254
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 149 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 190
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 191 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADEPIQ 245
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 246 IYEKIVS-----GKVRFPSHFSSDLKDLL 269
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 150 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 191
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 192 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 247 IYEKIVS-----GKVRFPSHFSSDLKDLL 270
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 95/208 (45%), Gaps = 36/208 (17%)
Query: 90 RAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPL-FASVANV 148
+ G T+ FL +A + + HP I+H+ + ++K M +VTE + S+
Sbjct: 59 KVGYTEKQRRDFL----GEASIMGQFDHPNIIHLEGVVTKSKPVM-IVTEYMENGSLDTF 113
Query: 149 LGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNG 208
L + + +++++ L I+ +++L S+ +HR ++ NILI SN
Sbjct: 114 LKKNDG-----------QFTVIQLVGMLRGISAGMKYL-SDMGYVHRDLAARNILINSNL 161
Query: 209 AWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFG 268
K+ FG + + + D A Y +P++ +TAPE + + F
Sbjct: 162 VCKVSDFGLS----RVLEDDPE------AAYTTRGGKIPIR----WTAPEAIAFR--KFT 205
Query: 269 CSSDIFSFGCVAYHLI--ARKPLFDCNN 294
+SD++S+G V + ++ +P ++ N
Sbjct: 206 SASDVWSYGIVMWEVVSYGERPYWEMTN 233
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 149 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 190
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 191 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 246 IYEKIVS-----GKVRFPSHFSSDLKDLL 269
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 135/323 (41%), Gaps = 70/323 (21%)
Query: 24 ETTVQEVTGPKAL--QDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDK 81
ET+V GP+ + + +ELL +G G G +++ + + + + VL K
Sbjct: 4 ETSVNR--GPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGK------IFAMKVLKK 55
Query: 82 RALSEARARAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPL 141
A + ++A+D +A+ L ++HP IV ++ A + + ++ E
Sbjct: 56 ---------AMIVRNAKDT--AHTKAERNILEEVKHPFIVDLIYAF-QTGGKLYLILE-- 101
Query: 142 FASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPEN 201
L E ++ RE G+ M + L +I+ +L LH +I+R + PEN
Sbjct: 102 ------YLSGGELFMQLERE--GIFMEDTACFY-LAEISMALGHLHQKG-IIYRDLKPEN 151
Query: 202 ILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPE-LV 260
I++ G KL FG ++I D + F ++ Y APE L+
Sbjct: 152 IMLNHQGHVKLTDFGLC---KESIHDGTVTHXF--------------CGTIEYMAPEILM 194
Query: 261 RSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN-------VKMYMNTLTYLSSDAFSS 313
RS N + D +S G + Y ++ P F N +K +N YL+ +A
Sbjct: 195 RSGHNR---AVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEA--- 248
Query: 314 IPSDLVPDLQKMLSANESFRPTA 336
DL L+K+L N + R A
Sbjct: 249 --RDL---LKKLLKRNAASRLGA 266
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 150 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 191
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 192 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 247 IYEKIVS-----GKVRFPSHFSSDLKDLL 270
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 150 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 191
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 192 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 247 IYEKIVS-----GKVRFPSHFSSDLKDLL 270
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 149 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 190
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 191 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 246 IYEKIVS-----GKVRFPSHFSSDLKDLL 269
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 149 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 190
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 191 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 246 IYEKIVS-----GKVRFPSHFSSDLKDLL 269
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 149 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 190
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 191 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 246 IYEKIVS-----GKVRFPSHFSSDLKDLL 269
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 40/241 (16%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L L HP I+ + E+K +VTE F + N K +
Sbjct: 100 LKSLDHPNIIKLFDVF-EDKKYFYLVTE--FYEGGELFEQIINRHKFDE---------CD 147
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAW---KLGGFGFAISTDQAISDS 228
+ + QI + +LH + ++HR I PENIL+ + + K+ FG +
Sbjct: 148 AANIMKQILSGICYLHKH-NIVHRDIKPENILLENKNSLLNIKIVDFGLS---------- 196
Query: 229 SNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKP 288
+F +Y + D + + Y APE+++ K N D++S G + Y L+ P
Sbjct: 197 ----SFFSKDYKLRDRL----GTAYYIAPEVLKKKYNE---KCDVWSCGVIMYILLCGYP 245
Query: 289 LFDCNNN---VKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFF 345
F N+ +K Y + + +I + ++ ML+ + + R TA + SR+
Sbjct: 246 PFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWI 305
Query: 346 R 346
+
Sbjct: 306 K 306
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 149 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 190
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 191 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 246 IYEKIVS-----GKVRFPSHFSSDLKDLL 269
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 150 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 191
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 192 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 247 IYEKIVS-----GKVRFPSHFSSDLKDLL 270
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 48/208 (23%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAIS-TDQAISDSSNVQAF 234
L +I + L++LHS R IHR I N+L++ G KL FG A TD I + V
Sbjct: 122 LREILKGLDYLHSE-RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGT- 179
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNN 294
P + APE++ K +++ +DI+S G A L +P
Sbjct: 180 ------------PF-----WMAPEVI--KQSAYDFKADIWSLGITAIELAKGEP-----P 215
Query: 295 NVKMYMNTLTYLSSDAFSSIPSDLVPDLQKM------------LSANESFRPTAMDFTGS 342
N ++ + +L IP + P L+ L+ + FRPTA +
Sbjct: 216 NSDLHPMRVLFL-------IPKNSPPTLEGQHSKPFKEFVEACLNKDPRFRPTAKELLKH 268
Query: 343 RFFRDDTRLRALRFLDHMLERDNMQKSE 370
+F T+ + FL +++R KSE
Sbjct: 269 KFITRYTKKTS--FLTELIDRYKRWKSE 294
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 101/250 (40%), Gaps = 45/250 (18%)
Query: 105 VRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKG 164
+R + L RHP I+ + Q + + + MV E + S + F+ + K R
Sbjct: 63 IRREIQNLKLFRHPHIIKLYQVI-STPSDIFMVME--YVSGGEL---FDYICKNGR---- 112
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFA--ISTD 222
+ E + QI +++ H + ++HR + PEN+L+ ++ K+ FG + +S
Sbjct: 113 --LDEKESRRLFQQILSGVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 169
Query: 223 QAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYH 282
+ + S S NY APE++ + + G DI+S G + Y
Sbjct: 170 EFLRXSCG--------------------SPNYAAPEVISGRLYA-GPEVDIWSSGVILYA 208
Query: 283 LIARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPD----LQKMLSANESFRPTAMD 338
L+ FD + ++ TL D P L P L+ ML + R T D
Sbjct: 209 LLCGTLPFDDD-----HVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKD 263
Query: 339 FTGSRFFRDD 348
+F+ D
Sbjct: 264 IREHEWFKQD 273
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 135 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 176
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 177 ---VKGRTWTLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 231
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 232 IYEKIVS-----GKVRFPSHFSSDLKDLL 255
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 150 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 191
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 192 ---VKGRTWTLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 247 IYEKIVS-----GKVRFPSHFSSDLKDLL 270
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 150 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 191
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 192 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 247 IYEKIVS-----GKVRFPSHFSSDLKDLL 270
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 170 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 211
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 212 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 266
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 267 IYEKIVS-----GKVRFPSHFSSDLKDLL 290
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 150 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 191
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 192 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 247 IYEKIVS-----GKVRFPSHFSSDLKDLL 270
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 149 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 190
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 191 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 246 IYEKIVS-----GKVRFPSHFSSDLKDLL 269
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 149 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 190
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 191 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 246 IYEKIVS-----GKVRFPSHFSSDLKDLL 269
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 170 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 211
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 212 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 266
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 267 IYEKIVS-----GKVRFPSHFSSDLKDLL 290
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 136 QIVLTFEYLHS-LDLIYRDLKPENLLIDEQGYIQVTDFGFAKR----------------- 177
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 178 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 232
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 233 IYEKIVS-----GKVRFPSHFSSDLKDLL 256
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 149 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 190
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 191 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 246 IYEKIVS-----GKVRFPSHFSSDLKDLL 269
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 149 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 190
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 191 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 246 IYEKIVS-----GKVRFPSHFSSDLKDLL 269
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 149 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 190
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 191 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 246 IYEKIVS-----GKVRFPSHFSSDLKDLL 269
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 93/207 (44%), Gaps = 34/207 (16%)
Query: 90 RAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVL 149
+ G T+ FL +A + + HP +VH+ + K M ++ ++ L
Sbjct: 80 KVGYTEKQRRDFL----CEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFL 135
Query: 150 GNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGA 209
R+ G + +++++ L IA + +L ++ +HR ++ NIL+ SN
Sbjct: 136 ----------RKHDG-QFTVIQLVGMLRGIAAGMRYL-ADMGYVHRDLAARNILVNSNLV 183
Query: 210 WKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC 269
K+ FG + + I D A Y +P++ +TAPE ++ + F
Sbjct: 184 CKVSDFGLS----RVIEDDPE------AVYTTTGGKIPVR----WTAPEAIQYR--KFTS 227
Query: 270 SSDIFSFGCVAYHLI--ARKPLFDCNN 294
+SD++S+G V + ++ +P +D +N
Sbjct: 228 ASDVWSYGIVMWEVMSYGERPYWDMSN 254
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 142 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 183
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 184 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 238
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 239 IYEKIVS-----GKVRFPSHFSSDLKDLL 262
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 76/180 (42%), Gaps = 32/180 (17%)
Query: 115 LRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKH 174
L HP IV + + + E + + +V E +AS V F+ + R M E +
Sbjct: 71 LNHPNIVKLFEVI-ETEKTLYLVME--YASGGEV---FDYLVAHGR------MKEKEARA 118
Query: 175 GLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAF 234
QI ++++ H ++HR + EN+L+ + K+ FGF+
Sbjct: 119 KFRQIVSAVQYCHQKY-IVHRDLKAENLLLDGDMNIKIADFGFS---------------- 161
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNN 294
E+ V + + S Y APEL + K G D++S G + Y L++ FD N
Sbjct: 162 --NEFTVGNKLDTFCGSPPYAAPELFQGKKYD-GPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 142 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 183
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 184 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 238
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 239 IYEKIVS-----GKVRFPSHFSSDLKDLL 262
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 68/151 (45%), Gaps = 24/151 (15%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
+I +L++LHS +++R + EN+++ +G K+ FG + I D + ++ F
Sbjct: 259 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC---KEGIKDGATMKTF--- 312
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
+ Y APE++ N +G + D + G V Y ++ + F ++ K
Sbjct: 313 -----------CGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK 359
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKMLSA 328
++ L + F P L P+ + +LS
Sbjct: 360 LF--ELILMEEIRF---PRTLGPEAKSLLSG 385
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 68/151 (45%), Gaps = 24/151 (15%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
+I +L++LHS +++R + EN+++ +G K+ FG + I D + ++ F
Sbjct: 256 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC---KEGIKDGATMKTF--- 309
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
+ Y APE++ N +G + D + G V Y ++ + F ++ K
Sbjct: 310 -----------CGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK 356
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKMLSA 328
++ L + F P L P+ + +LS
Sbjct: 357 LF--ELILMEEIRF---PRTLGPEAKSLLSG 382
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 98/231 (42%), Gaps = 44/231 (19%)
Query: 115 LRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGN---FENVSKVPRELKGLEMSLLE 171
L+HP IV + ++ E E V +++ FE++ V RE S +
Sbjct: 87 LKHPNIVRLHDSISE---------EGFHYLVFDLVTGGELFEDI--VAREY----YSEAD 131
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITS---NGAWKLGGFGFAISTDQAISDS 228
H + QI ES+ +H + ++HR + PEN+L+ S A KL FG AI
Sbjct: 132 ASHCIHQILESVNHIHQHD-IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGE---- 186
Query: 229 SNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKP 288
+ + + Y +PE++R + +G DI++ G + Y L+ P
Sbjct: 187 -------------QQAWFGFAGTPGYLSPEVLRK--DPYGKPVDIWACGVILYILLVGYP 231
Query: 289 LFDCNNNVKMY--MNTLTY-LSSDAFSSIPSDLVPDLQKMLSANESFRPTA 336
F + K+Y + Y S + ++ + + +ML+ N + R TA
Sbjct: 232 PFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITA 282
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 28/139 (20%)
Query: 158 VPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGF 217
+PR GL LL + QI E + +LH+ IHRA++ N+L+ ++ K+G FG
Sbjct: 103 LPRHCVGLAQLLLFAQ----QICEGMAYLHAQ-HYIHRALAARNVLLDNDRLVKIGDFGL 157
Query: 218 AISTDQAISDSSNVQAFHYAEYDV-EDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSF 276
A +A+ + Y V ED P + + APE + K F +SD++SF
Sbjct: 158 A----KAVPEGHEY-------YRVREDGDSP----VFWYAPECL--KECKFYYASDVWSF 200
Query: 277 GCVAYHLIARKPLFDCNNN 295
G Y L+ C++N
Sbjct: 201 GVTLYELLTY-----CDSN 214
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 123/306 (40%), Gaps = 50/306 (16%)
Query: 83 ALSEARARAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMD----ENKNAMAMVT 138
A+ R T++AED L R + + G H+++ +D + N + +V
Sbjct: 48 AMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVM 107
Query: 139 EPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAIS 198
V VLG EN+ + ++ + + L+ +K Q+ L+++H +IH I
Sbjct: 108 ------VFEVLG--ENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIK 159
Query: 199 PENILITSNGA------WKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSL 252
PEN+L+ + K+ G A D+ ++S +
Sbjct: 160 PENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTR-------------------- 199
Query: 253 NYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSSDAFS 312
Y +PE++ +GC +DI+S C+ + LI LF+ + +Y D
Sbjct: 200 EYRSPEVLLGA--PWGCGADIWSTACLIFELITGDFLFEPDEG-------HSYTKDDDHI 250
Query: 313 SIPSDLVPDLQKMLSANESFRPTAMDFTGSRFFRDDTRLRALRFLDHMLERDNMQKSEFL 372
+ +L+ +L L N + T + G R+ ++L+ D + E+ K E
Sbjct: 251 AQIIELLGELPSYLLRNGKYTRTFFNSRG--LLRNISKLKFWPLEDVLTEKYKFSKDE-A 307
Query: 373 KALSDM 378
K +SD
Sbjct: 308 KEISDF 313
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 123/306 (40%), Gaps = 50/306 (16%)
Query: 83 ALSEARARAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMD----ENKNAMAMVT 138
A+ R T++AED L R + + G H+++ +D + N + +V
Sbjct: 48 AMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVM 107
Query: 139 EPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAIS 198
V VLG EN+ + ++ + + L+ +K Q+ L+++H +IH I
Sbjct: 108 ------VFEVLG--ENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIK 159
Query: 199 PENILITSNGA------WKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSL 252
PEN+L+ + K+ G A D+ ++S +
Sbjct: 160 PENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTR-------------------- 199
Query: 253 NYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSSDAFS 312
Y +PE++ +GC +DI+S C+ + LI LF+ + +Y D
Sbjct: 200 EYRSPEVLLGA--PWGCGADIWSTACLIFELITGDFLFEPDEG-------HSYTKDDDHI 250
Query: 313 SIPSDLVPDLQKMLSANESFRPTAMDFTGSRFFRDDTRLRALRFLDHMLERDNMQKSEFL 372
+ +L+ +L L N + T + G R+ ++L+ D + E+ K E
Sbjct: 251 AQIIELLGELPSYLLRNGKYTRTFFNSRG--LLRNISKLKFWPLEDVLTEKYKFSKDE-A 307
Query: 373 KALSDM 378
K +SD
Sbjct: 308 KEISDF 313
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 133 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDSELKILDFGLARHTD------------- 178
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 179 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 230
Query: 296 V 296
+
Sbjct: 231 I 231
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 32/200 (16%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAIS-TDQAISDSSNVQAF 234
L +I + L++LHS + IHR I N+L++ +G KL FG A TD I ++ V
Sbjct: 110 LREILKGLDYLHSEKK-IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGT- 167
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNN 294
P + APE++ K +++ +DI+S G A L +P +
Sbjct: 168 ------------PF-----WMAPEVI--KQSAYDSKADIWSLGITAIELARGEP----PH 204
Query: 295 NVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSA----NESFRPTAMDFTGSRFFRDDTR 350
+ M L + + ++ + L++ + A SFRPTA + +F + +
Sbjct: 205 SELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAK 264
Query: 351 LRALRFLDHMLERDNMQKSE 370
+ +L +++R K+E
Sbjct: 265 KTS--YLTELIDRYKRWKAE 282
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 69/145 (47%), Gaps = 26/145 (17%)
Query: 160 RELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAI 219
+++ G+E S ++++ + Q+ + L+++HS A ++HR + P N+ + + K+ FG A
Sbjct: 134 QKIMGMEFSEEKIQYLVYQMLKGLKYIHS-AGVVHRDLKPGNLAVNEDCELKILDFGLAR 192
Query: 220 STDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCV 279
D ++ + Y APE++ S + + + DI+S GC+
Sbjct: 193 HADAEMTGYVVTRW--------------------YRAPEVILSWMH-YNQTVDIWSVGCI 231
Query: 280 AYHLIARKPLFDCNNNVKMYMNTLT 304
++ K LF + Y++ LT
Sbjct: 232 MAEMLTGKTLFKGKD----YLDQLT 252
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 137 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDSELKILDFGLARHTD------------- 182
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 183 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 234
Query: 296 V 296
+
Sbjct: 235 I 235
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 28/139 (20%)
Query: 158 VPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGF 217
+PR GL LL + QI E + +LH+ IHRA++ N+L+ ++ K+G FG
Sbjct: 104 LPRHCVGLAQLLLFAQ----QICEGMAYLHAQ-HYIHRALAARNVLLDNDRLVKIGDFGL 158
Query: 218 AISTDQAISDSSNVQAFHYAEYDV-EDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSF 276
A +A+ + Y V ED P + + APE + K F +SD++SF
Sbjct: 159 A----KAVPEGHEY-------YRVREDGDSP----VFWYAPECL--KECKFYYASDVWSF 201
Query: 277 GCVAYHLIARKPLFDCNNN 295
G Y L+ C++N
Sbjct: 202 GVTLYELLTY-----CDSN 215
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 28/184 (15%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
+E+ M + L Q+ ++ LHS A +IHR + P NI++ S+ K+ FG A + +
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
M P + Y APE++ + + DI+S GC+ +I
Sbjct: 180 F------------------MMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMI 219
Query: 285 ARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPS-DLVPDLQKMLSANESFRPTAMDFTGSR 343
LF +++ + + L + PS + + LQ + RP ++ +
Sbjct: 220 KGGVLFPGTDHIDQWNKVIEQLGT------PSPEFMKKLQPTVRTYVENRPKYAGYSFEK 273
Query: 344 FFRD 347
F D
Sbjct: 274 LFPD 277
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 71/176 (40%), Gaps = 28/176 (15%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+ I ++LE LHS +IHR + P N+LI + G K+ FG + + D +
Sbjct: 116 VSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGI---SGYLVDDVAK------ 166
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCS--SDIFSFGCVAYHL-IARKPLFDCN 293
D++ P Y APE + + N G S SDI+S G L I R P
Sbjct: 167 ---DIDAGCKP------YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG 217
Query: 294 NNVKMYMNTLT----YLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFF 345
+ + L +D FS ++ V + L N RPT + FF
Sbjct: 218 TPFQQLKQVVEEPSPQLPADKFS---AEFVDFTSQCLKKNSKERPTYPELMQHPFF 270
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 74/183 (40%), Gaps = 26/183 (14%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
+E+ M + L Q+ ++ LHS A +IHR + P NI++ S+ K+ FG A + +
Sbjct: 126 MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 184
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
M P + Y APE++ + + D++S GC+ ++
Sbjct: 185 F------------------MMTPYVVTRYYRAPEVILGM--GYKENVDLWSVGCIMGEMV 224
Query: 285 ARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRF 344
K LF + + + + L + + + LQ + RP ++ +
Sbjct: 225 CHKILFPGRDYIDQWNKVIEQLGTPC-----PEFMKKLQPTVRTYVENRPKYAGYSFEKL 279
Query: 345 FRD 347
F D
Sbjct: 280 FPD 282
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 28/184 (15%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
+E+ M + L Q+ ++ LHS A +IHR + P NI++ S+ K+ FG A + +
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
M P + Y APE++ + + DI+S GC+ +I
Sbjct: 180 F------------------MMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMI 219
Query: 285 ARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPS-DLVPDLQKMLSANESFRPTAMDFTGSR 343
LF +++ + + L + PS + + LQ + RP ++ +
Sbjct: 220 KGGVLFPGTDHIDQWNKVIEQLGT------PSPEFMKKLQPTVRTYVENRPKYAGYSFEK 273
Query: 344 FFRD 347
F D
Sbjct: 274 LFPD 277
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 131 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDXELKILDFGLARHTD------------- 176
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 177 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 296 V 296
+
Sbjct: 229 I 229
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 131 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 176
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 177 -------DEMTGYVATRWYRAPEIMLNAMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 296 V 296
+
Sbjct: 229 I 229
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 74/183 (40%), Gaps = 26/183 (14%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
+E+ M + L Q+ ++ LHS A +IHR + P NI++ S+ K+ FG A + +
Sbjct: 115 MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 173
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
M P + Y APE++ + + D++S GC+ ++
Sbjct: 174 F------------------MMTPYVVTRYYRAPEVILGM--GYKENVDLWSVGCIMGEMV 213
Query: 285 ARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRF 344
K LF + + + + L + + + LQ + RP ++ +
Sbjct: 214 CHKILFPGRDYIDQWNKVIEQLGTPC-----PEFMKKLQPTVRTYVENRPKYAGYSFEKL 268
Query: 345 FRD 347
F D
Sbjct: 269 FPD 271
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 116/313 (37%), Gaps = 72/313 (23%)
Query: 32 GPK----ALQDYELLDQIGSAGPG---LAWKLYSARARDVTRQQAQYPMVCVWVLDKRAL 84
GPK L+ YEL + IG+ G LA + + MV + ++DK L
Sbjct: 1 GPKDYDELLKYYELHETIGTGGFAKVKLACHILTGE------------MVAIKIMDKNTL 48
Query: 85 SEARARAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFAS 144
R ++ + L LRH I + + E N + MV E +
Sbjct: 49 GSDLPR--------------IKTEIEALKNLRHQHICQLYHVL-ETANKIFMVLE--YCP 91
Query: 145 VANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILI 204
+ + ++ E E + QI ++ ++HS HR + PEN+L
Sbjct: 92 GGELFDYIISQDRLSEE---------ETRVVFRQIVSAVAYVHSQG-YAHRDLKPENLLF 141
Query: 205 TSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKT 264
KL FG + + +H + SL Y APEL++ K+
Sbjct: 142 DEYHKLKLIDFGLC-------AKPKGNKDYH---------LQTCCGSLAYAAPELIQGKS 185
Query: 265 NSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPD--- 321
G +D++S G + Y L+ FD +N + +Y + +P L P
Sbjct: 186 -YLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMR-----GKYDVPKWLSPSSIL 239
Query: 322 -LQKMLSANESFR 333
LQ+ML + R
Sbjct: 240 LLQQMLQVDPKKR 252
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 131 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 176
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 177 -------DEMAGFVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 296 V 296
+
Sbjct: 229 I 229
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 26/183 (14%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
+E+ M + L Q+ ++ LHS A +IHR + P NI++ S+ K+ FG A + +
Sbjct: 122 MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 180
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
M P + Y APE++ + + DI+S GC+ ++
Sbjct: 181 F------------------MMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMV 220
Query: 285 ARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRF 344
K LF + + + + L + + + LQ + RP T +
Sbjct: 221 RHKILFPGRDYIDQWNKVIEQLGTPC-----PEFMKKLQPTVRNYVENRPKYAGLTFPKL 275
Query: 345 FRD 347
F D
Sbjct: 276 FPD 278
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 142 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDXELKILDFGLARHTD------------- 187
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 188 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 239
Query: 296 V 296
+
Sbjct: 240 I 240
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 26/183 (14%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
+E+ M + L Q+ ++ LHS A +IHR + P NI++ S+ K+ FG A + +
Sbjct: 120 MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 178
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
M P + Y APE++ + + DI+S GC+ ++
Sbjct: 179 F------------------MMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMV 218
Query: 285 ARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRF 344
K LF + + + + L + + + LQ + RP T +
Sbjct: 219 RHKILFPGRDYIDQWNKVIEQLGTPC-----PEFMKKLQPTVRNYVENRPKYAGLTFPKL 273
Query: 345 FRD 347
F D
Sbjct: 274 FPD 276
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 26/183 (14%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
+E+ M + L Q+ ++ LHS A +IHR + P NI++ S+ K+ FG A + +
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
M P + Y APE++ + + DI+S GC+ ++
Sbjct: 180 F------------------MMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMV 219
Query: 285 ARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRF 344
K LF + + + + L + + + LQ + RP T +
Sbjct: 220 RHKILFPGRDYIDQWNKVIEQLGTPC-----PEFMKKLQPTVRNYVENRPKYAGLTFPKL 274
Query: 345 FRD 347
F D
Sbjct: 275 FPD 277
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 131 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 176
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 177 -------DEMAGFVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 296 V 296
+
Sbjct: 229 I 229
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 26/183 (14%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
+E+ M + L Q+ ++ LHS A +IHR + P NI++ S+ K+ FG A + +
Sbjct: 115 MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 173
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
M P + Y APE++ + + DI+S GC+ ++
Sbjct: 174 F------------------MMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMV 213
Query: 285 ARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRF 344
K LF + + + + L + + + LQ + RP T +
Sbjct: 214 RHKILFPGRDYIDQWNKVIEQLGTPC-----PEFMKKLQPTVRNYVENRPKYAGLTFPKL 268
Query: 345 FRD 347
F D
Sbjct: 269 FPD 271
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 136 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDXELKILDFGLARHTD------------- 181
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 182 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 233
Query: 296 V 296
+
Sbjct: 234 I 234
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 26/183 (14%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
+E+ M + L Q+ ++ LHS A +IHR + P NI++ S+ K+ FG A + +
Sbjct: 122 MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 180
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
M P + Y APE++ + + DI+S GC+ ++
Sbjct: 181 F------------------MMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMV 220
Query: 285 ARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRF 344
K LF + + + + L + + + LQ + RP T +
Sbjct: 221 RHKILFPGRDYIDQWNKVIEQLGTPC-----PEFMKKLQPTVRNYVENRPKYAGLTFPKL 275
Query: 345 FRD 347
F D
Sbjct: 276 FPD 278
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 26/183 (14%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
+E+ M + L Q+ ++ LHS A +IHR + P NI++ S+ K+ FG A + +
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
M P + Y APE++ + + DI+S GC+ ++
Sbjct: 180 F------------------MMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMV 219
Query: 285 ARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRF 344
K LF + + + + L + + + LQ + RP T +
Sbjct: 220 RHKILFPGRDYIDQWNKVIEQLGTPC-----PEFMKKLQPTVRNYVENRPKYAGLTFPKL 274
Query: 345 FRD 347
F D
Sbjct: 275 FPD 277
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 26/183 (14%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
+E+ M + L Q+ ++ LHS A +IHR + P NI++ S+ K+ FG A + +
Sbjct: 115 MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 173
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
M P + Y APE++ + + DI+S GC+ ++
Sbjct: 174 F------------------MMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMV 213
Query: 285 ARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRF 344
K LF + + + + L + + + LQ + RP T +
Sbjct: 214 RHKILFPGRDYIDQWNKVIEQLGTPC-----PEFMKKLQPTVRNYVENRPKYAGLTFPKL 268
Query: 345 FRD 347
F D
Sbjct: 269 FPD 271
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 26/183 (14%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
+E+ M + L Q+ ++ LHS A +IHR + P NI++ S+ K+ FG A + +
Sbjct: 114 MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 172
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
M P + Y APE++ + + DI+S GC+ ++
Sbjct: 173 F------------------MMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMV 212
Query: 285 ARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRF 344
K LF + + + + L + + + LQ + RP T +
Sbjct: 213 RHKILFPGRDYIDQWNKVIEQLGTPC-----PEFMKKLQPTVRNYVENRPKYAGLTFPKL 267
Query: 345 FRD 347
F D
Sbjct: 268 FPD 270
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 136 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDXELKILDFGLARHTD------------- 181
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 182 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 233
Query: 296 V 296
+
Sbjct: 234 I 234
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 131 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 176
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 177 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 296 V 296
+
Sbjct: 229 I 229
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN++I G ++ FGFA
Sbjct: 149 QIVLTFEYLHS-LDLIYRDLKPENLMIDQQGYIQVTDFGFAKR----------------- 190
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 191 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 246 IYEKIVS-----GKVRFPSHFSSDLKDLL 269
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 160 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 205
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 206 -------DEMTGYVATRWYRAPEIMLNWMH-YNMTVDIWSVGCIMAELLTGRTLFPGTDH 257
Query: 296 V 296
+
Sbjct: 258 I 258
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 32/200 (16%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAIS-TDQAISDSSNVQAF 234
L +I + L++LHS + IHR I N+L++ +G KL FG A TD I + V
Sbjct: 125 LREILKGLDYLHSEKK-IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGT- 182
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNN 294
P + APE++ K +++ +DI+S G A L +P +
Sbjct: 183 ------------PF-----WMAPEVI--KQSAYDSKADIWSLGITAIELARGEP----PH 219
Query: 295 NVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSA----NESFRPTAMDFTGSRFFRDDTR 350
+ M L + + ++ + L++ + A SFRPTA + +F + +
Sbjct: 220 SELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAK 279
Query: 351 LRALRFLDHMLERDNMQKSE 370
+ +L +++R K+E
Sbjct: 280 KTS--YLTELIDRYKRWKAE 297
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 142 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 187
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 188 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 239
Query: 296 V 296
+
Sbjct: 240 I 240
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 7/118 (5%)
Query: 176 LLQIAESLEFLHSNAR-LIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAF 234
Q +++ +H +IHR + EN+L+++ G KL FG A + S + Q
Sbjct: 142 FYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRR 201
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTN-SFGCSSDIFSFGCVAYHLIARKPLFD 291
E ++ + P+ Y PE++ +N G DI++ GC+ Y L R+ F+
Sbjct: 202 ALVEEEITRNTTPM-----YRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE 254
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 143 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 188
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 189 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 240
Query: 296 V 296
+
Sbjct: 241 I 241
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 131 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 176
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 177 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 296 V 296
+
Sbjct: 229 I 229
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 143 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 188
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 189 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 240
Query: 296 V 296
+
Sbjct: 241 I 241
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 131 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 176
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 177 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 296 V 296
+
Sbjct: 229 I 229
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 143 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 188
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 189 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 240
Query: 296 V 296
+
Sbjct: 241 I 241
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 137 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 182
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 183 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 234
Query: 296 V 296
+
Sbjct: 235 I 235
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 131 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 176
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 177 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 296 V 296
+
Sbjct: 229 I 229
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 74/183 (40%), Gaps = 26/183 (14%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
+E+ M + L Q+ ++ LHS A +IHR + P NI++ S+ K+ FG A + +
Sbjct: 122 MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 180
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
M P + Y APE++ + + DI+S GC+ +I
Sbjct: 181 F------------------MMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMI 220
Query: 285 ARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRF 344
LF +++ + + L + + + LQ + RP ++ +
Sbjct: 221 KGGVLFPGTDHIDQWNKVIEQLGTPC-----PEFMKKLQPTVRTYVENRPKYAGYSFEKL 275
Query: 345 FRD 347
F D
Sbjct: 276 FPD 278
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 131 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 176
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 177 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 296 V 296
+
Sbjct: 229 I 229
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 74/183 (40%), Gaps = 26/183 (14%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
+E+ M + L Q+ ++ LHS A +IHR + P NI++ S+ K+ FG A + +
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
M P + Y APE++ + + DI+S GC+ +I
Sbjct: 180 F------------------MMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMI 219
Query: 285 ARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRF 344
LF +++ + + L + + + LQ + RP ++ +
Sbjct: 220 KGGVLFPGTDHIDQWNKVIEQLGTPC-----PEFMKKLQPTVRTYVENRPKYAGYSFEKL 274
Query: 345 FRD 347
F D
Sbjct: 275 FPD 277
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 131 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 176
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 177 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 296 V 296
+
Sbjct: 229 I 229
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 154 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 199
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 200 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 251
Query: 296 V 296
+
Sbjct: 252 I 252
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 138 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 183
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 184 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 235
Query: 296 V 296
+
Sbjct: 236 I 236
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 136 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 181
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 182 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 233
Query: 296 V 296
+
Sbjct: 234 I 234
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 130 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 175
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 176 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 227
Query: 296 V 296
+
Sbjct: 228 I 228
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 27/171 (15%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFA-ISTDQAISDSSNVQAFHY 236
QI ++E+ H + +++HR + PEN+L+ N K+ FG + I TD +S
Sbjct: 116 QIICAIEYCHRH-KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC------ 168
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAY-HLIARKPLFD-CNN 294
S NY APE++ K + G D++S G V Y L+ R P D
Sbjct: 169 -------------GSPNYAAPEVINGKLYA-GPEVDVWSCGIVLYVMLVGRLPFDDEFIP 214
Query: 295 NVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFF 345
N+ +N+ Y+ D S L+ ++M+ A+ R T + +F
Sbjct: 215 NLFKKVNSCVYVMPDFLSPGAQSLI---RRMIVADPMQRITIQEIRRDPWF 262
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 127 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 172
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 173 -------DEMAGFVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
Query: 296 V 296
+
Sbjct: 225 I 225
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN++I G ++ FGFA
Sbjct: 149 QIVLTFEYLHS-LDLIYRDLKPENLIIDQQGYIQVTDFGFAKR----------------- 190
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 191 ---VKGRTWXLCGTPEYLAPEIIISK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 246 IYEKIVS-----GKVRFPSHFSSDLKDLL 269
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 26/183 (14%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
+E+ M + L Q+ ++ LHS A +IHR + P NI++ S+ K+ FG A + +
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 179
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
M P + Y APE++ + + DI+S GC+ ++
Sbjct: 180 F------------------MMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMV 219
Query: 285 ARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRF 344
K LF + + + + L + + + LQ + RP T +
Sbjct: 220 RHKILFPGRDYIDQWNKVIEQLGTPC-----PEFMKKLQPTVRNYVENRPKYAGLTFPKL 274
Query: 345 FRD 347
F D
Sbjct: 275 FPD 277
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 69/151 (45%), Gaps = 24/151 (15%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
+I +L++LHS +++R + EN+++ +G K+ FG + I D + ++ F
Sbjct: 118 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC---KEGIKDGATMKXF--- 171
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
+ Y APE++ + N +G + D + G V Y ++ + F ++ K
Sbjct: 172 -----------CGTPEYLAPEVL--EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK 218
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKMLSA 328
++ L + F P L P+ + +LS
Sbjct: 219 LF--ELILMEEIRF---PRTLGPEAKSLLSG 244
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 131 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 176
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 177 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 296 V 296
+
Sbjct: 229 I 229
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 141 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 186
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 187 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 238
Query: 296 V 296
+
Sbjct: 239 I 239
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 69/151 (45%), Gaps = 24/151 (15%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
+I +L++LHS +++R + EN+++ +G K+ FG + I D + ++ F
Sbjct: 116 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC---KEGIKDGATMKXF--- 169
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
+ Y APE++ + N +G + D + G V Y ++ + F ++ K
Sbjct: 170 -----------CGTPEYLAPEVL--EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK 216
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKMLSA 328
++ L + F P L P+ + +LS
Sbjct: 217 LF--ELILMEEIRF---PRTLGPEAKSLLSG 242
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 131 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 176
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 177 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 296 V 296
+
Sbjct: 229 I 229
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 137 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 182
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 183 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 234
Query: 296 V 296
+
Sbjct: 235 I 235
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 32/200 (16%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAIS-TDQAISDSSNVQAF 234
L +I + L++LHS + IHR I N+L++ +G KL FG A TD I + V
Sbjct: 110 LREILKGLDYLHSEKK-IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGT- 167
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNN 294
P + APE++ K +++ +DI+S G A L +P +
Sbjct: 168 ------------PF-----WMAPEVI--KQSAYDSKADIWSLGITAIELARGEP----PH 204
Query: 295 NVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSA----NESFRPTAMDFTGSRFFRDDTR 350
+ M L + + ++ + L++ + A SFRPTA + +F + +
Sbjct: 205 SELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAK 264
Query: 351 LRALRFLDHMLERDNMQKSE 370
+ +L +++R K+E
Sbjct: 265 KTS--YLTELIDRYKRWKAE 282
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 133 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 178
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 179 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 230
Query: 296 V 296
+
Sbjct: 231 I 231
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 26/183 (14%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
+E+ M + L Q+ ++ LHS A +IHR + P NI++ S+ K+ FG A + +
Sbjct: 159 MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 217
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
M P + Y APE++ + + DI+S GC+ ++
Sbjct: 218 F------------------MMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMV 257
Query: 285 ARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRF 344
K LF + + + + L + + + LQ + RP T +
Sbjct: 258 RHKILFPGRDYIDQWNKVIEQLGTPC-----PEFMKKLQPTVRNYVENRPKYAGLTFPKL 312
Query: 345 FRD 347
F D
Sbjct: 313 FPD 315
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 151 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 196
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 197 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 248
Query: 296 V 296
+
Sbjct: 249 I 249
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 137 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 182
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 183 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 234
Query: 296 V 296
+
Sbjct: 235 I 235
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 154 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 199
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 200 -------DEMXGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 251
Query: 296 V 296
+
Sbjct: 252 I 252
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 133 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 178
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 179 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 230
Query: 296 V 296
+
Sbjct: 231 I 231
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 133 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 178
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 179 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 230
Query: 296 V 296
+
Sbjct: 231 I 231
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 69/151 (45%), Gaps = 24/151 (15%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
+I +L++LHS +++R + EN+++ +G K+ FG + I D + ++ F
Sbjct: 117 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC---KEGIKDGATMKXF--- 170
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
+ Y APE++ + N +G + D + G V Y ++ + F ++ K
Sbjct: 171 -----------CGTPEYLAPEVL--EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK 217
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKMLSA 328
++ L + F P L P+ + +LS
Sbjct: 218 LF--ELILMEEIRF---PRTLGPEAKSLLSG 243
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 151 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 196
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 197 -------DEMXGXVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 248
Query: 296 V 296
+
Sbjct: 249 I 249
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 151 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 196
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 197 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 248
Query: 296 V 296
+
Sbjct: 249 I 249
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 131 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 176
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 177 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 296 V 296
+
Sbjct: 229 I 229
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 128 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 173
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 174 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 225
Query: 296 V 296
+
Sbjct: 226 I 226
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 150 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 195
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 196 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 247
Query: 296 V 296
+
Sbjct: 248 I 248
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 109/255 (42%), Gaps = 41/255 (16%)
Query: 76 VWVLDKRALSEARARAGLT--KSAEDAFLDLVRADAGK--LVRLRHPGIVHVVQAMDENK 131
V+++ K + S+AR + K A D VR + LV + HP IV K
Sbjct: 40 VFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV---------K 90
Query: 132 NAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNAR 191
A TE + + L + +++ +E+ E ++K L ++A +L+ LHS
Sbjct: 91 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE---DVKFYLAELALALDHLHSLG- 146
Query: 192 LIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPS 251
+I+R + PENIL+ G KL FG + + D E +
Sbjct: 147 IIYRDLKPENILLDEEGHIKLTDFGLSKES-----------------IDHEKKAYSFCGT 189
Query: 252 LNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSSDAF 311
+ Y APE+V + ++ S+D +SFG + + ++ F + T+T + A
Sbjct: 190 VEYMAPEVVNRRGHT--QSADWWSFGVLMFEMLTGTLPFQGKDR----KETMTMILK-AK 242
Query: 312 SSIPSDLVPDLQKML 326
+P L P+ Q +L
Sbjct: 243 LGMPQFLSPEAQSLL 257
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 69/145 (47%), Gaps = 26/145 (17%)
Query: 160 RELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAI 219
+++ GL+ S ++++ + Q+ + L+++HS A ++HR + P N+ + + K+ FG A
Sbjct: 116 QKIMGLKFSEEKIQYLVYQMLKGLKYIHS-AGVVHRDLKPGNLAVNEDCELKILDFGLAR 174
Query: 220 STDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCV 279
D ++ + Y APE++ S + + + DI+S GC+
Sbjct: 175 HADAEMTGYVVTRW--------------------YRAPEVILSWMH-YNQTVDIWSVGCI 213
Query: 280 AYHLIARKPLFDCNNNVKMYMNTLT 304
++ K LF + Y++ LT
Sbjct: 214 MAEMLTGKTLFKGKD----YLDQLT 234
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 150 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 195
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 196 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 247
Query: 296 V 296
+
Sbjct: 248 I 248
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 96/230 (41%), Gaps = 38/230 (16%)
Query: 115 LRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKH 174
L+HP IV + ++ E + L + FE++ V RE S + H
Sbjct: 78 LKHPNIVRLHDSISEEGHHY------LIFDLVTGGELFEDI--VAREY----YSEADASH 125
Query: 175 GLLQIAESLEFLHSNARLIHRAISPENILITS---NGAWKLGGFGFAISTDQAISDSSNV 231
+ QI E++ H ++HR + PEN+L+ S A KL FG AI +
Sbjct: 126 CIQQILEAVLHCHQMG-VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGE------- 177
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
+ + + Y +PE++R + +G D+++ G + Y L+ P F
Sbjct: 178 ----------QQAWFGFAGTPGYLSPEVLRK--DPYGKPVDLWACGVILYILLVGYPPFW 225
Query: 292 CNNNVKMY--MNTLTY-LSSDAFSSIPSDLVPDLQKMLSANESFRPTAMD 338
+ ++Y + Y S + ++ + + KML+ N S R TA +
Sbjct: 226 DEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAE 275
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 136 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 181
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 182 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 233
Query: 296 V 296
+
Sbjct: 234 I 234
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 128 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 173
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 174 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 225
Query: 296 V 296
+
Sbjct: 226 I 226
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 26/183 (14%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
+E+ M + L Q+ ++ LHS A +IHR + P NI++ S+ K+ FG A + +
Sbjct: 159 MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 217
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
M P + Y APE++ + + DI+S GC+ ++
Sbjct: 218 F------------------MMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMV 257
Query: 285 ARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRF 344
K LF + + + + L + + + LQ + RP T +
Sbjct: 258 RHKILFPGRDYIDQWNKVIEQLGTPC-----PEFMKKLQPTVRNYVENRPKYAGLTFPKL 312
Query: 345 FRD 347
F D
Sbjct: 313 FPD 315
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 127 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 172
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 173 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
Query: 296 V 296
+
Sbjct: 225 I 225
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 127 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 172
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 173 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
Query: 296 V 296
+
Sbjct: 225 I 225
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 31/167 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSN---GAWKLGGFGFAISTDQAISDSSNVQAF 234
QI E + +LH N ++H + P+NIL++S G K+ FG + A
Sbjct: 139 QILEGVYYLHQN-NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE-------- 189
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNN 294
+ + + Y APE++ + ++D+++ G +AY L+ F +
Sbjct: 190 ----------LREIMGTPEYLAPEIL--NYDPITTATDMWNIGIIAYMLLTHTSPFVGED 237
Query: 295 NVKMYMN----TLTYLSSDAFSSIPSDLVPD-LQKMLSANESFRPTA 336
N + Y+N + Y S + FSS+ S L D +Q +L N RPTA
Sbjct: 238 NQETYLNISQVNVDY-SEETFSSV-SQLATDFIQSLLVKNPEKRPTA 282
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 127 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 172
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 173 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
Query: 296 V 296
+
Sbjct: 225 I 225
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 26/183 (14%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
+E+ M + L Q+ ++ LHS A +IHR + P NI++ S+ K+ FG A + +
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 179
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
M P + Y APE++ + + DI+S GC+ ++
Sbjct: 180 F------------------MMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMV 219
Query: 285 ARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRF 344
K LF + + + + L + + + LQ + RP T +
Sbjct: 220 RHKILFPGRDYIDQWNKVIEQLGTPC-----PEFMKKLQPTVRNYVENRPKYAGLTFPKL 274
Query: 345 FRD 347
F D
Sbjct: 275 FPD 277
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 131 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 176
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 177 -------DEMTGXVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 296 V 296
+
Sbjct: 229 I 229
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A TD
Sbjct: 129 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------- 174
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 175 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 226
Query: 296 V 296
+
Sbjct: 227 I 227
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 96/208 (46%), Gaps = 36/208 (17%)
Query: 90 RAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPL-FASVANV 148
+ G T+ FL +A + + HP I+ + + ++K M +VTE + S+ +
Sbjct: 82 KVGYTEKQRRDFL----GEASIMGQFDHPNIIRLEGVVTKSKPVM-IVTEYMENGSLDSF 136
Query: 149 LGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNG 208
L + + +++++ L IA +++L S+ +HR ++ NILI SN
Sbjct: 137 LRKHD-----------AQFTVIQLVGMLRGIASGMKYL-SDMGYVHRDLAARNILINSNL 184
Query: 209 AWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFG 268
K+ FG A + + D A Y +P++ +T+PE + + F
Sbjct: 185 VCKVSDFGLA----RVLEDDPE------AAYTTRGGKIPIR----WTSPEAIAYR--KFT 228
Query: 269 CSSDIFSFGCVAYHLI--ARKPLFDCNN 294
+SD++S+G V + ++ +P ++ +N
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 96/230 (41%), Gaps = 38/230 (16%)
Query: 115 LRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKH 174
L+HP IV + ++ E + L + FE++ V RE S + H
Sbjct: 67 LKHPNIVRLHDSISEEGHHY------LIFDLVTGGELFEDI--VAREY----YSEADASH 114
Query: 175 GLLQIAESLEFLHSNARLIHRAISPENILITS---NGAWKLGGFGFAISTDQAISDSSNV 231
+ QI E++ H ++HR + PEN+L+ S A KL FG AI +
Sbjct: 115 CIQQILEAVLHCHQMG-VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE------- 166
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
+ + + Y +PE++R + +G D+++ G + Y L+ P F
Sbjct: 167 ----------QQAWFGFAGTPGYLSPEVLRK--DPYGKPVDLWACGVILYILLVGYPPFW 214
Query: 292 CNNNVKMY--MNTLTY-LSSDAFSSIPSDLVPDLQKMLSANESFRPTAMD 338
+ ++Y + Y S + ++ + + KML+ N S R TA +
Sbjct: 215 DEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAE 264
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 46.2 bits (108), Expect = 8e-05, Method: Composition-based stats.
Identities = 72/318 (22%), Positives = 120/318 (37%), Gaps = 73/318 (22%)
Query: 33 PKALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWV-LDKRALSEARARA 91
P +DYE+L IG+ G R + + R+ + VW LD +++EA +
Sbjct: 2 PSRAEDYEVLYTIGTGSYG--------RCQKIRRKSDG--KILVWKELDYGSMTEAEKQ- 50
Query: 92 GLTKSAEDAFLDLVRADAGKLVRLRHPGIV-HVVQAMDENKNAMAMVTEPL----FASVA 146
++ ++ L L+HP IV + + +D + +V E ASV
Sbjct: 51 ------------MLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASV- 97
Query: 147 NVLGNFENVSKVPRELKGL--EMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILI 204
++K +E + L E L M L + E ++HR + P N+ +
Sbjct: 98 --------ITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL 149
Query: 205 TSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKT 264
KLG FG A + D + F Y Y +PE +
Sbjct: 150 DGKQNVKLGDFGLARILNH---DEDFAKEFVGTPY--------------YMSPE--QMNR 190
Query: 265 NSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVKMY-------MNTLTYLSSDAFSSIPSD 317
S+ SDI+S GC+ Y L A P F + ++ + Y SD + I
Sbjct: 191 MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEI--- 247
Query: 318 LVPDLQKMLSANESFRPT 335
+ +ML+ + RP+
Sbjct: 248 ----ITRMLNLKDYHRPS 261
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 108/261 (41%), Gaps = 60/261 (22%)
Query: 39 YELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLTKSAE 98
Y +L QIGS G S++ V ++ Q ++ + L EA + + E
Sbjct: 30 YSILKQIGSGG--------SSKVFQVLNEKKQ-----IYAIKYVNLEEADNQTLDSYRNE 76
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKV 158
A+L+ ++ + K++RL I + MV E + + L +++
Sbjct: 77 IAYLNKLQQHSDKIIRLYDYEIT---------DQYIYMVMECGNIDLNSWLKKKKSID-- 125
Query: 159 PRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFA 218
P E K ++LE H + Q ++H + P N LI +G KL FG A
Sbjct: 126 PWERKSYWKNMLEAVHTIHQHG-----------IVHSDLKPANFLIV-DGMLKLIDFGIA 173
Query: 219 ISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNS---------FGC 269
+Q D+++V V+DS + ++NY PE ++ ++S
Sbjct: 174 ---NQMQPDTTSV---------VKDSQVG---TVNYMPPEAIKDMSSSRENGKSKSKISP 218
Query: 270 SSDIFSFGCVAYHLIARKPLF 290
SD++S GC+ Y++ K F
Sbjct: 219 KSDVWSLGCILYYMTYGKTPF 239
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 70/176 (39%), Gaps = 28/176 (15%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+ I ++LE LHS +IHR + P N+LI + G K FG + + D +
Sbjct: 143 VSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGI---SGYLVDDVAK------ 193
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCS--SDIFSFGCVAYHL-IARKPLFDCN 293
D++ P Y APE + + N G S SDI+S G L I R P
Sbjct: 194 ---DIDAGCKP------YXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWG 244
Query: 294 NNVKMYMNTLT----YLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFF 345
+ + L +D FS ++ V + L N RPT + FF
Sbjct: 245 TPFQQLKQVVEEPSPQLPADKFS---AEFVDFTSQCLKKNSKERPTYPELXQHPFF 297
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 109/255 (42%), Gaps = 41/255 (16%)
Query: 76 VWVLDKRALSEARARAGLT--KSAEDAFLDLVRADAGK--LVRLRHPGIVHVVQAMDENK 131
V+++ K + S+AR + K A D VR + LV + HP IV K
Sbjct: 41 VFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV---------K 91
Query: 132 NAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNAR 191
A TE + + L + +++ +E+ E ++K L ++A +L+ LHS
Sbjct: 92 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE---DVKFYLAELALALDHLHSLG- 147
Query: 192 LIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPS 251
+I+R + PENIL+ G KL FG + + D E +
Sbjct: 148 IIYRDLKPENILLDEEGHIKLTDFGLSKES-----------------IDHEKKAYSFCGT 190
Query: 252 LNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSSDAF 311
+ Y APE+V + ++ S+D +SFG + + ++ F + T+T + A
Sbjct: 191 VEYMAPEVVNRRGHT--QSADWWSFGVLMFEMLTGTLPFQGKDR----KETMTMILK-AK 243
Query: 312 SSIPSDLVPDLQKML 326
+P L P+ Q +L
Sbjct: 244 LGMPQFLSPEAQSLL 258
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 109/255 (42%), Gaps = 41/255 (16%)
Query: 76 VWVLDKRALSEARARAGLT--KSAEDAFLDLVRADAGK--LVRLRHPGIVHVVQAMDENK 131
V+++ K + S+AR + K A D VR + LV + HP IV K
Sbjct: 40 VFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV---------K 90
Query: 132 NAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNAR 191
A TE + + L + +++ +E+ E ++K L ++A +L+ LHS
Sbjct: 91 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE---DVKFYLAELALALDHLHSLG- 146
Query: 192 LIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPS 251
+I+R + PENIL+ G KL FG + + D E +
Sbjct: 147 IIYRDLKPENILLDEEGHIKLTDFGLSKES-----------------IDHEKKAYSFCGT 189
Query: 252 LNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSSDAF 311
+ Y APE+V + ++ S+D +SFG + + ++ F + T+T + A
Sbjct: 190 VEYMAPEVVNRRGHT--QSADWWSFGVLMFEMLTGTLPFQGKDR----KETMTMILK-AK 242
Query: 312 SSIPSDLVPDLQKML 326
+P L P+ Q +L
Sbjct: 243 LGMPQFLSPEAQSLL 257
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 71/176 (40%), Gaps = 28/176 (15%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+ I ++LE LHS +IHR + P N+LI + G K+ FG + +++ +
Sbjct: 160 VSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKT-------- 211
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCS--SDIFSFGCVAYHL-IARKPLFDCN 293
++ P Y APE + + N G S SDI+S G L I R P
Sbjct: 212 ----IDAGCKP------YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG 261
Query: 294 NNVKMYMNTLT----YLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFF 345
+ + L +D FS ++ V + L N RPT + FF
Sbjct: 262 TPFQQLKQVVEEPSPQLPADKFS---AEFVDFTSQCLKKNSKERPTYPELMQHPFF 314
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 21/144 (14%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
+E+ M + L Q+ ++ LHS A +IHR + P NI++ S+ K+ FG A +
Sbjct: 119 MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--- 174
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
S+N M P + Y APE++ + + DI+S GC+ L+
Sbjct: 175 ---STNFM------------MTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGELV 217
Query: 285 ARKPLFDCNNNVKMYMNTLTYLSS 308
+F +++ + + L +
Sbjct: 218 KGSVIFQGTDHIDQWNKVIEQLGT 241
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG TD
Sbjct: 131 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTD------------- 176
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 177 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 296 V 296
+
Sbjct: 229 I 229
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 17/127 (13%)
Query: 112 LVRLRHPGIVHVVQAMDE-NKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLL 170
L +L HP +V +V+ +D+ N++ + MV E L N V +VP LK L S
Sbjct: 90 LKKLDHPNVVKLVEVLDDPNEDHLYMVFE---------LVNQGPVMEVPT-LKPL--SED 137
Query: 171 EMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFA---ISTDQAISD 227
+ + + + +E+LH ++IHR I P N+L+ +G K+ FG + +D +S+
Sbjct: 138 QARFYFQDLIKGIEYLHYQ-KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSN 196
Query: 228 SSNVQAF 234
+ AF
Sbjct: 197 TVGTPAF 203
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 74/183 (40%), Gaps = 26/183 (14%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
+E+ M + L Q+ ++ LHS A +IHR + P NI++ S+ K+ FG A + +
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
M P + Y APE++ + + D++S GC+ ++
Sbjct: 180 F------------------MMEPEVVTRYYRAPEVILGM--GYKENVDLWSVGCIMGEMV 219
Query: 285 ARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRF 344
K LF + + + + L + + + LQ + RP ++ +
Sbjct: 220 CHKILFPGRDYIDQWNKVIEQLGTPC-----PEFMKKLQPTVRTYVENRPKYAGYSFEKL 274
Query: 345 FRD 347
F D
Sbjct: 275 FPD 277
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
L QIA + LHS ++IHR + P+NIL++++ + A + ISD +
Sbjct: 139 LRQIASGVAHLHS-LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 197
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNS-FGCSSDIFSFGCVAYHLIAR 286
+ ++ + + APEL+ T S DIFS GCV Y+++++
Sbjct: 198 SGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSK 249
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 108/261 (41%), Gaps = 60/261 (22%)
Query: 39 YELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLTKSAE 98
Y +L QIGS G S++ V ++ Q ++ + L EA + + E
Sbjct: 14 YSILKQIGSGG--------SSKVFQVLNEKKQ-----IYAIKYVNLEEADNQTLDSYRNE 60
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKV 158
A+L+ ++ + K++RL I + MV E + + L +++
Sbjct: 61 IAYLNKLQQHSDKIIRLYDYEIT---------DQYIYMVMECGNIDLNSWLKKKKSID-- 109
Query: 159 PRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFA 218
P E K ++LE H + Q ++H + P N LI +G KL FG A
Sbjct: 110 PWERKSYWKNMLEAVHTIHQHG-----------IVHSDLKPANFLIV-DGMLKLIDFGIA 157
Query: 219 ISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNS---------FGC 269
+Q D+++V V+DS + ++NY PE ++ ++S
Sbjct: 158 ---NQMQPDTTSV---------VKDSQVG---TVNYMPPEAIKDMSSSRENGKSKSKISP 202
Query: 270 SSDIFSFGCVAYHLIARKPLF 290
SD++S GC+ Y++ K F
Sbjct: 203 KSDVWSLGCILYYMTYGKTPF 223
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 21/119 (17%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
+I +LE+LHS +++R I EN+++ +G K+ FG + ISD + ++ F
Sbjct: 118 EIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLC---KEGISDGATMKXF--- 170
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI-ARKPLFDCNNN 295
+ Y APE++ + N +G + D + G V Y ++ R P ++ ++
Sbjct: 171 -----------CGTPEYLAPEVL--EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 216
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 21/119 (17%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
+I +LE+LHS +++R I EN+++ +G K+ FG + ISD + ++ F
Sbjct: 113 EIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLC---KEGISDGATMKXF--- 165
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI-ARKPLFDCNNN 295
+ Y APE++ + N +G + D + G V Y ++ R P ++ ++
Sbjct: 166 -----------CGTPEYLAPEVL--EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 74/183 (40%), Gaps = 26/183 (14%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
+E+ M + L Q+ ++ LHS A +IHR + P NI++ S+ K+ FG A + +
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
M P + Y APE++ + + DI+S GC+ +I
Sbjct: 180 F------------------MMTPEVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMI 219
Query: 285 ARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRF 344
LF +++ + + L + + + LQ + RP ++ +
Sbjct: 220 KGGVLFPGTDHIDQWNKVIEQLGTPC-----PEFMKKLQPTVRTYVENRPKYAGYSFEKL 274
Query: 345 FRD 347
F D
Sbjct: 275 FPD 277
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 78/201 (38%), Gaps = 29/201 (14%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
+I L LH + ++IHR I +N+L+T N KL FG + D+ + + Y
Sbjct: 137 EILRGLSHLHQH-KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPY- 194
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTN---SFGCSSDIFSFGCVAYHLI-ARKPLFDCN 293
+ APE++ N ++ SD++S G A + PL D +
Sbjct: 195 ----------------WMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH 238
Query: 294 NNVKMYM---NTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFFRDDTR 350
+++ N L S +S + + L N S RP F RD
Sbjct: 239 PMRALFLIPRNPAPRLKSKKWSKKFQSFI---ESCLVKNHSQRPATEQLMKHPFIRDQPN 295
Query: 351 LRALRF-LDHMLERDNMQKSE 370
R +R L ++R ++ E
Sbjct: 296 ERQVRIQLKDHIDRTKKKRGE 316
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN++I G K+ FG A
Sbjct: 149 QIVLTFEYLHS-LDLIYRDLKPENLMIDQQGYIKVTDFGLAKR----------------- 190
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 191 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 246 IYEKIVS-----GKVRFPSHFSSDLKDLL 269
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
L QIA + LHS ++IHR + P+NIL++++ + A + ISD +
Sbjct: 139 LRQIASGVAHLHS-LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 197
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNS-FGCSSDIFSFGCVAYHLIAR 286
+ ++ + + APEL+ T S DIFS GCV Y+++++
Sbjct: 198 SGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSK 249
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 35/138 (25%)
Query: 160 RELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITS-NGAWKLGGFGFA 218
R + + M+L+ + + Q+ ++ F+HS + HR I P+N+L+ S + KL FG A
Sbjct: 133 RSGRSIPMNLISIY--IYQLFRAVGFIHSLG-ICHRDIKPQNLLVNSKDNTLKLCDFGSA 189
Query: 219 ISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLN------YTAPELVRSKTNSFGCSSD 272
++P +PS+ Y APEL+ T + S D
Sbjct: 190 ------------------------KKLIPSEPSVAXICSRFYRAPELMLGAT-EYTPSID 224
Query: 273 IFSFGCVAYHLIARKPLF 290
++S GCV LI KPLF
Sbjct: 225 LWSIGCVFGELILGKPLF 242
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 76/180 (42%), Gaps = 32/180 (17%)
Query: 115 LRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKH 174
L HP IV + + + E + + +V E +AS V F+ + R M E +
Sbjct: 70 LNHPNIVKLFEVI-ETEKTLYLVME--YASGGEV---FDYLVAHGR------MKEKEARA 117
Query: 175 GLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAF 234
QI ++++ H ++HR + EN+L+ ++ K+ FGF+
Sbjct: 118 KFRQIVSAVQYCHQKF-IVHRDLKAENLLLDADMNIKIADFGFS---------------- 160
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNN 294
E+ + + S Y APEL + K G D++S G + Y L++ FD N
Sbjct: 161 --NEFTFGNKLDTFCGSPPYAAPELFQGKKYD-GPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 96/208 (46%), Gaps = 36/208 (17%)
Query: 90 RAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPL-FASVANV 148
+ G T+ FL +A + + HP I+ + + ++K M +VTE + S+ +
Sbjct: 53 KVGYTEKQRRDFL----GEASIMGQFDHPNIIRLEGVVTKSKPVM-IVTEXMENGSLDSF 107
Query: 149 LGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNG 208
L + + +++++ L IA +++L S+ +HR ++ NILI SN
Sbjct: 108 LRKHD-----------AQFTVIQLVGMLRGIASGMKYL-SDMGYVHRDLAARNILINSNL 155
Query: 209 AWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFG 268
K+ FG + + + D A Y +P++ +T+PE + + F
Sbjct: 156 VCKVSDFGLS----RVLEDDPE------AAYTTRGGKIPIR----WTSPEAIAYR--KFT 199
Query: 269 CSSDIFSFGCVAYHLI--ARKPLFDCNN 294
+SD++S+G V + ++ +P ++ +N
Sbjct: 200 SASDVWSYGIVLWEVMSYGERPYWEMSN 227
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ +G A TD
Sbjct: 131 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDYGLARHTD------------- 176
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 177 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 296 V 296
+
Sbjct: 229 I 229
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 76/180 (42%), Gaps = 32/180 (17%)
Query: 115 LRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKH 174
L HP IV + + + E + + +V E +AS V F+ + R M E +
Sbjct: 70 LNHPNIVKLFEVI-ETEKTLYLVME--YASGGEV---FDYLVAHGR------MKEKEARA 117
Query: 175 GLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAF 234
QI ++++ H ++HR + EN+L+ ++ K+ FGF+
Sbjct: 118 KFRQIVSAVQYCHQKF-IVHRDLKAENLLLDADMNIKIADFGFS---------------- 160
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNN 294
E+ + + S Y APEL + K G D++S G + Y L++ FD N
Sbjct: 161 --NEFTFGNKLDEFCGSPPYAAPELFQGKKYD-GPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 76/180 (42%), Gaps = 32/180 (17%)
Query: 115 LRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKH 174
L HP IV + + + E + + +V E +AS V F+ + R M E +
Sbjct: 70 LNHPNIVKLFEVI-ETEKTLYLVME--YASGGEV---FDYLVAHGR------MKEKEARA 117
Query: 175 GLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAF 234
QI ++++ H ++HR + EN+L+ ++ K+ FGF+
Sbjct: 118 KFRQIVSAVQYCHQKF-IVHRDLKAENLLLDADMNIKIADFGFS---------------- 160
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNN 294
E+ + + S Y APEL + K G D++S G + Y L++ FD N
Sbjct: 161 --NEFTFGNKLDTFCGSPPYAAPELFQGKKYD-GPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 21/119 (17%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
+I +LE+LHS +++R I EN+++ +G K+ FG + ISD + ++ F
Sbjct: 116 EIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLC---KEGISDGATMKTF--- 168
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI-ARKPLFDCNNN 295
+ Y APE++ + N +G + D + G V Y ++ R P ++ ++
Sbjct: 169 -----------CGTPEYLAPEVL--EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 214
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 21/119 (17%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
+I +LE+LHS +++R I EN+++ +G K+ FG + ISD + ++ F
Sbjct: 113 EIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLC---KEGISDGATMKTF--- 165
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI-ARKPLFDCNNN 295
+ Y APE++ + N +G + D + G V Y ++ R P ++ ++
Sbjct: 166 -----------CGTPEYLAPEVL--EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 76/180 (42%), Gaps = 32/180 (17%)
Query: 115 LRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKH 174
L HP IV + + + E + + +V E +AS V F+ + R M E +
Sbjct: 70 LNHPNIVKLFEVI-ETEKTLYLVME--YASGGEV---FDYLVAHGR------MKEKEARA 117
Query: 175 GLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAF 234
QI ++++ H ++HR + EN+L+ ++ K+ FGF+
Sbjct: 118 KFRQIVSAVQYCHQKF-IVHRDLKAENLLLDADMNIKIADFGFS---------------- 160
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNN 294
E+ + + S Y APEL + K G D++S G + Y L++ FD N
Sbjct: 161 --NEFTFGNKLDTFCGSPPYAAPELFQGKKYD-GPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
+E+ M + L Q+ ++ LHS A +IHR + P NI++ S+ K+ FG A +
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--- 176
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
+N M P + Y APE++ + + DI+S GC+ L+
Sbjct: 177 ---CTNFM------------MTPYVVTRYYRAPEVILGM--GYAANVDIWSVGCIMGELV 219
Query: 285 ARKPLFDCNNNVKMYMNTLTYLSS 308
+F +++ + + L +
Sbjct: 220 KGCVIFQGTDHIDQWNKVIEQLGT 243
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 108/261 (41%), Gaps = 60/261 (22%)
Query: 39 YELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLTKSAE 98
Y +L QIGS G S++ V ++ Q ++ + L EA + + E
Sbjct: 58 YSILKQIGSGG--------SSKVFQVLNEKKQ-----IYAIKYVNLEEADNQTLDSYRNE 104
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKV 158
A+L+ ++ + K++RL I + MV E + + L +++
Sbjct: 105 IAYLNKLQQHSDKIIRLYDYEIT---------DQYIYMVMECGNIDLNSWLKKKKSID-- 153
Query: 159 PRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFA 218
P E K ++LE H + Q ++H + P N LI +G KL FG A
Sbjct: 154 PWERKSYWKNMLEAVHTIHQHG-----------IVHSDLKPANFLIV-DGMLKLIDFGIA 201
Query: 219 ISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNS---------FGC 269
+Q D+++V V+DS + ++NY PE ++ ++S
Sbjct: 202 ---NQMQPDTTSV---------VKDSQVG---TVNYMPPEAIKDMSSSRENGKSKSKISP 246
Query: 270 SSDIFSFGCVAYHLIARKPLF 290
SD++S GC+ Y++ K F
Sbjct: 247 KSDVWSLGCILYYMTYGKTPF 267
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 108/261 (41%), Gaps = 60/261 (22%)
Query: 39 YELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLTKSAE 98
Y +L QIGS G S++ V ++ Q ++ + L EA + + E
Sbjct: 11 YSILKQIGSGG--------SSKVFQVLNEKKQ-----IYAIKYVNLEEADNQTLDSYRNE 57
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKV 158
A+L+ ++ + K++RL I + MV E + + L +++
Sbjct: 58 IAYLNKLQQHSDKIIRLYDYEIT---------DQYIYMVMECGNIDLNSWLKKKKSID-- 106
Query: 159 PRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFA 218
P E K ++LE H + Q ++H + P N LI +G KL FG A
Sbjct: 107 PWERKSYWKNMLEAVHTIHQHG-----------IVHSDLKPANFLIV-DGMLKLIDFGIA 154
Query: 219 ISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNS---------FGC 269
+Q D+++V V+DS + ++NY PE ++ ++S
Sbjct: 155 ---NQMQPDTTSV---------VKDSQVG---TVNYMPPEAIKDMSSSRENGKSKSKISP 199
Query: 270 SSDIFSFGCVAYHLIARKPLF 290
SD++S GC+ Y++ K F
Sbjct: 200 KSDVWSLGCILYYMTYGKTPF 220
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 96/208 (46%), Gaps = 36/208 (17%)
Query: 90 RAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPL-FASVANV 148
+ G T+ FL +A + + HP I+ + + ++K M +VTE + S+ +
Sbjct: 82 KVGYTEKQRRDFL----GEASIMGQFDHPNIIRLEGVVTKSKPVM-IVTEYMENGSLDSF 136
Query: 149 LGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNG 208
L + + +++++ L IA +++L S+ +HR ++ NILI SN
Sbjct: 137 LRKHD-----------AQFTVIQLVGMLRGIASGMKYL-SDMGFVHRDLAARNILINSNL 184
Query: 209 AWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFG 268
K+ FG + + + D A Y +P++ +T+PE + + F
Sbjct: 185 VCKVSDFGLS----RVLEDDPE------AAYTTRGGKIPIR----WTSPEAIAYR--KFT 228
Query: 269 CSSDIFSFGCVAYHLI--ARKPLFDCNN 294
+SD++S+G V + ++ +P ++ +N
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 96/208 (46%), Gaps = 36/208 (17%)
Query: 90 RAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPL-FASVANV 148
+ G T+ FL +A + + HP I+ + + ++K M +VTE + S+ +
Sbjct: 82 KVGYTEKQRRDFL----GEASIMGQFDHPNIIRLEGVVTKSKPVM-IVTEXMENGSLDSF 136
Query: 149 LGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNG 208
L + + +++++ L IA +++L S+ +HR ++ NILI SN
Sbjct: 137 LRKHD-----------AQFTVIQLVGMLRGIASGMKYL-SDMGYVHRDLAARNILINSNL 184
Query: 209 AWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFG 268
K+ FG + + + D A Y +P++ +T+PE + + F
Sbjct: 185 VCKVSDFGLS----RVLEDDPE------AAYTTRGGKIPIR----WTSPEAIAYR--KFT 228
Query: 269 CSSDIFSFGCVAYHLI--ARKPLFDCNN 294
+SD++S+G V + ++ +P ++ +N
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 96/209 (45%), Gaps = 38/209 (18%)
Query: 90 RAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVL 149
+AG T+ FL ++A + + HP I+ + + + AM +VTE +
Sbjct: 86 KAGYTERQRRDFL----SEASIMGQFDHPNIIRLEGVVTRGRLAM-IVTEYM-------- 132
Query: 150 GNFENVS--KVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSN 207
EN S R G + +++++ L + + +L S+ +HR ++ N+L+ SN
Sbjct: 133 ---ENGSLDTFLRTHDG-QFTIMQLVGMLRGVGAGMRYL-SDLGYVHRDLAARNVLVDSN 187
Query: 208 GAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSF 267
K+ FG + + + D + A +P++ +TAPE + +T F
Sbjct: 188 LVCKVSDFGLS----RVLEDDPD------AAXTTTGGKIPIR----WTAPEAIAFRT--F 231
Query: 268 GCSSDIFSFGCVAYHLIA--RKPLFDCNN 294
+SD++SFG V + ++A +P ++ N
Sbjct: 232 SSASDVWSFGVVMWEVLAYGERPYWNMTN 260
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 21/119 (17%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
+I +LE+LHS +++R I EN+++ +G K+ FG + ISD + ++ F
Sbjct: 113 EIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLC---KEGISDGATMKTF--- 165
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI-ARKPLFDCNNN 295
+ Y APE++ + N +G + D + G V Y ++ R P ++ ++
Sbjct: 166 -----------CGTPEYLAPEVL--EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 108/261 (41%), Gaps = 60/261 (22%)
Query: 39 YELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLTKSAE 98
Y +L QIGS G S++ V ++ Q ++ + L EA + + E
Sbjct: 10 YSILKQIGSGG--------SSKVFQVLNEKKQ-----IYAIKYVNLEEADNQTLDSYRNE 56
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKV 158
A+L+ ++ + K++RL I + MV E + + L +++
Sbjct: 57 IAYLNKLQQHSDKIIRLYDYEIT---------DQYIYMVMECGNIDLNSWLKKKKSID-- 105
Query: 159 PRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFA 218
P E K ++LE H + Q ++H + P N LI +G KL FG A
Sbjct: 106 PWERKSYWKNMLEAVHTIHQHG-----------IVHSDLKPANFLIV-DGMLKLIDFGIA 153
Query: 219 ISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNS---------FGC 269
+Q D+++V V+DS + ++NY PE ++ ++S
Sbjct: 154 ---NQMQPDTTSV---------VKDSQVG---TVNYMPPEAIKDMSSSRENGKSKSKISP 198
Query: 270 SSDIFSFGCVAYHLIARKPLF 290
SD++S GC+ Y++ K F
Sbjct: 199 KSDVWSLGCILYYMTYGKTPF 219
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 21/119 (17%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
+I +LE+LHS +++R I EN+++ +G K+ FG + ISD + ++ F
Sbjct: 113 EIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLC---KEGISDGATMKXF--- 165
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI-ARKPLFDCNNN 295
+ Y APE++ + N +G + D + G V Y ++ R P ++ ++
Sbjct: 166 -----------CGTPEYLAPEVL--EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 149 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 190
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y AP ++ SK + + D ++ G + Y + A P F + ++
Sbjct: 191 ---VKGRTWXLCGTPEYLAPAIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 246 IYEKIVS-----GKVRFPSHFSSDLKDLL 269
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 32/162 (19%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + ++++HS +LIHR + P NI + K+G FG S +D ++
Sbjct: 144 QITKGVDYIHS-KKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLK---NDGKRTRS---- 195
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCN---N 294
+ +L Y +PE + S+ +G D+++ G LI + L C+
Sbjct: 196 -----------KGTLRYMSPEQISSQ--DYGKEVDLYALG-----LILAELLHVCDTAFE 237
Query: 295 NVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTA 336
K + + + SD F L LQK+LS RP
Sbjct: 238 TSKFFTDLRDGIISDIFDKKEKTL---LQKLLSKKPEDRPNT 276
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 96/208 (46%), Gaps = 36/208 (17%)
Query: 90 RAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPL-FASVANV 148
+ G T+ FL +A + + HP I+ + + ++K M +VTE + S+ +
Sbjct: 53 KVGYTEKQRRDFL----GEASIMGQFDHPNIIRLEGVVTKSKPVM-IVTEYMENGSLDSF 107
Query: 149 LGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNG 208
L + + +++++ L IA +++L S+ +HR ++ NILI SN
Sbjct: 108 LRKHD-----------AQFTVIQLVGMLRGIASGMKYL-SDMGYVHRDLAARNILINSNL 155
Query: 209 AWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFG 268
K+ FG + + + D A Y +P++ +T+PE + + F
Sbjct: 156 VCKVSDFGLS----RVLEDDPE------AAYTTRGGKIPIR----WTSPEAIAYR--KFT 199
Query: 269 CSSDIFSFGCVAYHLI--ARKPLFDCNN 294
+SD++S+G V + ++ +P ++ +N
Sbjct: 200 SASDVWSYGIVLWEVMSYGERPYWEMSN 227
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 21/119 (17%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
+I +LE+LHS +++R I EN+++ +G K+ FG + ISD + ++ F
Sbjct: 113 EIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLC---KEGISDGATMKXF--- 165
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI-ARKPLFDCNNN 295
+ Y APE++ + N +G + D + G V Y ++ R P ++ ++
Sbjct: 166 -----------CGTPEYLAPEVL--EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 75/183 (40%), Gaps = 26/183 (14%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
+E+ M + L Q+ ++ LHS A +IHR + P NI++ S+ K+ FG A + +
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
M P + Y APE++ + + DI+S GC+ ++
Sbjct: 180 F------------------MMEPEVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMV 219
Query: 285 ARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRF 344
K LF + + + + L + P+ + LQ + RP ++ +
Sbjct: 220 CHKILFPGRDYIDQWNKVIEQLGTPC----PA-FMKKLQPTVRNYVENRPKYAGYSFEKL 274
Query: 345 FRD 347
F D
Sbjct: 275 FPD 277
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 8/127 (6%)
Query: 171 EMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSN 230
+++H Q+ ++++FLH N +L H + PENIL N ++L + D+ S+
Sbjct: 138 QVRHMAFQLCQAVKFLHDN-KLTHTDLKPENILFV-NSDYEL-TYNLEKKRDERSVKSTA 194
Query: 231 VQA--FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKP 288
V+ F A +D E + + +Y APE++ S C D++S GC+ +
Sbjct: 195 VRVVDFGSATFDHEHHS-TIVSTRHYRAPEVILELGWSQPC--DVWSIGCIIFEYYVGFT 251
Query: 289 LFDCNNN 295
LF ++N
Sbjct: 252 LFQTHDN 258
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 96/208 (46%), Gaps = 36/208 (17%)
Query: 90 RAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPL-FASVANV 148
+ G T+ FL +A + + HP I+ + + ++K M +VTE + S+ +
Sbjct: 82 KVGYTEKQRRDFL----GEASIMGQFDHPNIIRLEGVVTKSKPVM-IVTEYMENGSLDSF 136
Query: 149 LGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNG 208
L + + +++++ L IA +++L S+ +HR ++ NILI SN
Sbjct: 137 LRKHD-----------AQFTVIQLVGMLRGIASGMKYL-SDMGYVHRDLAARNILINSNL 184
Query: 209 AWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFG 268
K+ FG + + + D A Y +P++ +T+PE + + F
Sbjct: 185 VCKVSDFGLS----RVLEDDPE------AAYTTRGGKIPIR----WTSPEAIAYR--KFT 228
Query: 269 CSSDIFSFGCVAYHLI--ARKPLFDCNN 294
+SD++S+G V + ++ +P ++ +N
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 96/208 (46%), Gaps = 36/208 (17%)
Query: 90 RAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPL-FASVANV 148
+ G T+ FL +A + + HP I+ + + ++K M +VTE + S+ +
Sbjct: 82 KVGYTEKQRRDFL----GEASIMGQFDHPNIIRLEGVVTKSKPVM-IVTEYMENGSLDSF 136
Query: 149 LGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNG 208
L + + +++++ L IA +++L S+ +HR ++ NILI SN
Sbjct: 137 LRKHD-----------AQFTVIQLVGMLRGIASGMKYL-SDMGYVHRDLAARNILINSNL 184
Query: 209 AWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFG 268
K+ FG + + + D A Y +P++ +T+PE + + F
Sbjct: 185 VCKVSDFGLS----RVLEDDPE------AAYTTRGGKIPIR----WTSPEAIAYR--KFT 228
Query: 269 CSSDIFSFGCVAYHLI--ARKPLFDCNN 294
+SD++S+G V + ++ +P ++ +N
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 28/184 (15%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
+E+ M + L Q+ ++ LHS A +IHR + P NI++ S+ K+ FG A + +
Sbjct: 121 MELDHERMSYLLYQMLVGIKHLHS-AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
M P + Y APE++ + + DI+S G + +I
Sbjct: 180 F------------------MMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGVIMGEMI 219
Query: 285 ARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPS-DLVPDLQKMLSANESFRPTAMDFTGSR 343
LF +++ + + L + PS + + LQ + RP ++ +
Sbjct: 220 KGGVLFPGTDHIDQWNKVIEQLGT------PSPEFMKKLQPTVRTYVENRPKYAGYSFEK 273
Query: 344 FFRD 347
F D
Sbjct: 274 LFPD 277
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 96/208 (46%), Gaps = 36/208 (17%)
Query: 90 RAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPL-FASVANV 148
+ G T+ FL +A + + HP I+ + + ++K M +VTE + S+ +
Sbjct: 80 KVGYTEKQRRDFL----GEASIMGQFDHPNIIRLEGVVTKSKPVM-IVTEYMENGSLDSF 134
Query: 149 LGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNG 208
L + + +++++ L IA +++L S+ +HR ++ NILI SN
Sbjct: 135 LRKHD-----------AQFTVIQLVGMLRGIASGMKYL-SDMGYVHRDLAARNILINSNL 182
Query: 209 AWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFG 268
K+ FG + + + D A Y +P++ +T+PE + + F
Sbjct: 183 VCKVSDFGLS----RVLEDDPE------AAYTTRGGKIPIR----WTSPEAIAYR--KFT 226
Query: 269 CSSDIFSFGCVAYHLI--ARKPLFDCNN 294
+SD++S+G V + ++ +P ++ +N
Sbjct: 227 SASDVWSYGIVLWEVMSYGERPYWEMSN 254
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 96/208 (46%), Gaps = 36/208 (17%)
Query: 90 RAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPL-FASVANV 148
+ G T+ FL +A + + HP I+ + + ++K M +VTE + S+ +
Sbjct: 82 KVGYTEKQRRDFL----GEASIMGQFDHPNIIRLEGVVTKSKPVM-IVTEYMENGSLDSF 136
Query: 149 LGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNG 208
L + + +++++ L IA +++L S+ +HR ++ NILI SN
Sbjct: 137 LRKHD-----------AQFTVIQLVGMLRGIASGMKYL-SDMGYVHRDLAARNILINSNL 184
Query: 209 AWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFG 268
K+ FG + + + D A Y +P++ +T+PE + + F
Sbjct: 185 VCKVSDFGLS----RVLEDDPE------AAYTTRGGKIPIR----WTSPEAIAYR--KFT 228
Query: 269 CSSDIFSFGCVAYHLI--ARKPLFDCNN 294
+SD++S+G V + ++ +P ++ +N
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 96/208 (46%), Gaps = 36/208 (17%)
Query: 90 RAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPL-FASVANV 148
+ G T+ FL +A + + HP I+ + + ++K M +VTE + S+ +
Sbjct: 70 KVGYTEKQRRDFL----GEASIMGQFDHPNIIRLEGVVTKSKPVM-IVTEYMENGSLDSF 124
Query: 149 LGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNG 208
L + + +++++ L IA +++L S+ +HR ++ NILI SN
Sbjct: 125 LRKHD-----------AQFTVIQLVGMLRGIASGMKYL-SDMGYVHRDLAARNILINSNL 172
Query: 209 AWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFG 268
K+ FG + + + D A Y +P++ +T+PE + + F
Sbjct: 173 VCKVSDFGLS----RVLEDDPE------AAYTTRGGKIPIR----WTSPEAIAYR--KFT 216
Query: 269 CSSDIFSFGCVAYHLI--ARKPLFDCNN 294
+SD++S+G V + ++ +P ++ +N
Sbjct: 217 SASDVWSYGIVLWEVMSYGERPYWEMSN 244
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 96/208 (46%), Gaps = 36/208 (17%)
Query: 90 RAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPL-FASVANV 148
+ G T+ FL +A + + HP I+ + + ++K M +VTE + S+ +
Sbjct: 82 KVGYTEKQRRDFL----GEASIMGQFDHPNIIRLEGVVTKSKPVM-IVTEYMENGSLDSF 136
Query: 149 LGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNG 208
L + + +++++ L IA +++L S+ +HR ++ NILI SN
Sbjct: 137 LRKHD-----------AQFTVIQLVGMLRGIASGMKYL-SDMGYVHRDLAARNILINSNL 184
Query: 209 AWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFG 268
K+ FG + + + D A Y +P++ +T+PE + + F
Sbjct: 185 VCKVSDFGLS----RVLEDDPE------AAYTTRGGKIPIR----WTSPEAIAYR--KFT 228
Query: 269 CSSDIFSFGCVAYHLI--ARKPLFDCNN 294
+SD++S+G V + ++ +P ++ +N
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 28/184 (15%)
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
+E+ M + L Q+ ++ LHS A +IHR + P NI++ S+ K+ FG A + +
Sbjct: 121 MELDHERMSYLLYQMLVGIKHLHS-AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
M P + Y APE++ + + DI+S G + +I
Sbjct: 180 F------------------MMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGVIMGEMI 219
Query: 285 ARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPS-DLVPDLQKMLSANESFRPTAMDFTGSR 343
LF +++ + + L + PS + + LQ + RP ++ +
Sbjct: 220 KGGVLFPGTDHIDQWNKVIEQLGT------PSPEFMKKLQPTVRTYVENRPKYAGYSFEK 273
Query: 344 FFRD 347
F D
Sbjct: 274 LFPD 277
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 95/208 (45%), Gaps = 36/208 (17%)
Query: 90 RAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPL-FASVANV 148
+ G T+ FL +A + + HP I+ + + ++K M +VTE + S+ +
Sbjct: 82 KVGYTEKQRRDFL----GEASIMGQFDHPNIIRLEGVVTKSKPVM-IVTEYMENGSLDSF 136
Query: 149 LGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNG 208
L + + +++++ L IA +++L S+ +HR ++ NILI SN
Sbjct: 137 LRKHD-----------AQFTVIQLVGMLRGIASGMKYL-SDMGYVHRDLAARNILINSNL 184
Query: 209 AWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFG 268
K+ FG + + D A Y +P++ +T+PE + + F
Sbjct: 185 VCKVSDFGLG----RVLEDDPE------AAYTTRGGKIPIR----WTSPEAIAYR--KFT 228
Query: 269 CSSDIFSFGCVAYHLI--ARKPLFDCNN 294
+SD++S+G V + ++ +P ++ +N
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 31/158 (19%)
Query: 128 DENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLH 187
D+ + ++ +V E + LG+ + +PR GL LL + QI E + +LH
Sbjct: 87 DQGEKSLQLVMEYV------PLGSLRDY--LPRHSIGLAQLLLFAQ----QICEGMAYLH 134
Query: 188 SNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDV-EDSML 246
S IHR ++ N+L+ ++ K+G FG A + + + Y V ED
Sbjct: 135 SQ-HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG-----------HEYYRVREDGDS 182
Query: 247 PLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
P + + APE + K F +SD++SFG Y L+
Sbjct: 183 P----VFWYAPECL--KEYKFYYASDVWSFGVTLYELL 214
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 78/180 (43%), Gaps = 32/180 (17%)
Query: 115 LRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKH 174
L HP IV + + + E + + +V E +AS V F+ + R M E +
Sbjct: 70 LNHPNIVKLFEVI-ETEKTLYLVME--YASGGEV---FDYLVAHGR------MKEKEARA 117
Query: 175 GLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAF 234
QI ++++ H ++HR + EN+L+ ++ K+ FGF+ + + + AF
Sbjct: 118 KFRQIVSAVQYCHQKF-IVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDAF 172
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNN 294
A P Y APEL + K G D++S G + Y L++ FD N
Sbjct: 173 CGA------------PP--YAAPELFQGKKYD-GPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 108/261 (41%), Gaps = 60/261 (22%)
Query: 39 YELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLTKSAE 98
Y +L QIGS G S++ V ++ Q ++ + L EA + + E
Sbjct: 58 YSILKQIGSGG--------SSKVFQVLNEKKQ-----IYAIKYVNLEEADNQTLDSYRNE 104
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKV 158
A+L+ ++ + K++RL I + MV E + + L +++
Sbjct: 105 IAYLNKLQQHSDKIIRLYDYEIT---------DQYIYMVMECGNIDLNSWLKKKKSID-- 153
Query: 159 PRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFA 218
P E K ++LE H + Q ++H + P N LI +G KL FG A
Sbjct: 154 PWERKSYWKNMLEAVHTIHQHG-----------IVHSDLKPANFLIV-DGMLKLIDFGIA 201
Query: 219 ISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNS---------FGC 269
+Q D+++V V+DS + ++NY PE ++ ++S
Sbjct: 202 ---NQMQPDTTSV---------VKDSQVG---TVNYMPPEAIKDMSSSRENGKSKSKISP 246
Query: 270 SSDIFSFGCVAYHLIARKPLF 290
SD++S GC+ Y++ K F
Sbjct: 247 KSDVWSLGCILYYMTYGKTPF 267
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 96/208 (46%), Gaps = 36/208 (17%)
Query: 90 RAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPL-FASVANV 148
+ G T+ FL +A + + HP I+ + + ++K M +VTE + S+ +
Sbjct: 82 KVGYTEKQRRDFL----GEASIMGQFDHPNIIRLEGVVTKSKPVM-IVTEXMENGSLDSF 136
Query: 149 LGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNG 208
L + + +++++ L IA +++L S+ +HR ++ NILI SN
Sbjct: 137 LRKHD-----------AQFTVIQLVGMLRGIASGMKYL-SDMGAVHRDLAARNILINSNL 184
Query: 209 AWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFG 268
K+ FG + + + D A Y +P++ +T+PE + + F
Sbjct: 185 VCKVSDFGLS----RVLEDDPE------AAYTTRGGKIPIR----WTSPEAIAYR--KFT 228
Query: 269 CSSDIFSFGCVAYHLI--ARKPLFDCNN 294
+SD++S+G V + ++ +P ++ +N
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 40/189 (21%)
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVT-EPLFASVANVL-GNFENVS 156
DAFL A+A + +L+H +V + A+VT EP++ + G+ +
Sbjct: 59 DAFL----AEANLMKQLQHQRLVRLY----------AVVTQEPIYIITEYMENGSLVDFL 104
Query: 157 KVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFG 216
K P +K LL+M QIAE + F+ IHR + NIL++ + K+ FG
Sbjct: 105 KTPSGIKLTINKLLDMAA---QIAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFG 160
Query: 217 FAISTDQAISDSSNVQAFHYAEYDV-EDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFS 275
A + I D+ EY E + P++ +TAPE + T F SD++S
Sbjct: 161 LA----RLIEDN---------EYTAREGAKFPIK----WTAPEAINYGT--FTIKSDVWS 201
Query: 276 FGCVAYHLI 284
FG + ++
Sbjct: 202 FGILLTEIV 210
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 20/127 (15%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
+IA +L +LHS +++R + PENIL+ S G L FG + I +S F
Sbjct: 147 EIASALGYLHS-LNIVYRDLKPENILLDSQGHIVLTDFGLC---KENIEHNSTTSTF--- 199
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
+ Y APE++ + + + D + G V Y ++ P F N +
Sbjct: 200 -----------CGTPEYLAPEVLHKQ--PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE 246
Query: 298 MYMNTLT 304
MY N L
Sbjct: 247 MYDNILN 253
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 40/189 (21%)
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVT-EPLFASVANVL-GNFENVS 156
DAFL A+A + +L+H +V + A+VT EP++ + G+ +
Sbjct: 58 DAFL----AEANLMKQLQHQRLVRLY----------AVVTQEPIYIITEYMENGSLVDFL 103
Query: 157 KVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFG 216
K P +K LL+M QIAE + F+ IHR + NIL++ + K+ FG
Sbjct: 104 KTPSGIKLTINKLLDMAA---QIAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFG 159
Query: 217 FAISTDQAISDSSNVQAFHYAEYDV-EDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFS 275
A + I D+ EY E + P++ +TAPE + T F SD++S
Sbjct: 160 LA----RLIEDN---------EYTAREGAKFPIK----WTAPEAINYGT--FTIKSDVWS 200
Query: 276 FGCVAYHLI 284
FG + ++
Sbjct: 201 FGILLTEIV 209
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 40/189 (21%)
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVT-EPLFASVANVL-GNFENVS 156
DAFL A+A + +L+H +V + A+VT EP++ + G+ +
Sbjct: 63 DAFL----AEANLMKQLQHQRLVRLY----------AVVTQEPIYIITEYMENGSLVDFL 108
Query: 157 KVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFG 216
K P +K LL+M QIAE + F+ IHR + NIL++ + K+ FG
Sbjct: 109 KTPSGIKLTINKLLDMA---AQIAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFG 164
Query: 217 FAISTDQAISDSSNVQAFHYAEYDV-EDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFS 275
A + I D+ EY E + P++ +TAPE + T F SD++S
Sbjct: 165 LA----RLIEDN---------EYTAREGAKFPIK----WTAPEAINYGT--FTIKSDVWS 205
Query: 276 FGCVAYHLI 284
FG + ++
Sbjct: 206 FGILLTEIV 214
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 95/237 (40%), Gaps = 44/237 (18%)
Query: 112 LVRLRHPGIVHVVQAMD--------ENKNAMAMVTEPLFASVANV-LGNFENVSKVPREL 162
L +L H IVH D +KN+ T+ LF + G E + R
Sbjct: 58 LAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 117
Query: 163 KGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTD 222
K ++ LE+ QI + ++++HS +LI+R + P NI + K+G FG S
Sbjct: 118 KLDKVLALEL---FEQITKGVDYIHSK-KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLK 173
Query: 223 QAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYH 282
+D ++ + +L Y +PE + S+ +G D+++ G
Sbjct: 174 ---NDGKRXRS---------------KGTLRYMSPEQISSQ--DYGKEVDLYALG----- 208
Query: 283 LIARKPLFDCN---NNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTA 336
LI + L C+ K + + + SD F L LQK+LS RP
Sbjct: 209 LILAELLHVCDTAFETSKFFTDLRDGIISDIFDKKEKTL---LQKLLSKKPEDRPNT 262
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 73/193 (37%), Gaps = 53/193 (27%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
L + +L +LH N +IHR I ++IL+TS+G KL FGF + + + Y
Sbjct: 148 LSVLRALSYLH-NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPY 206
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNV 296
+ APE++ +G DI+S G + +I +P
Sbjct: 207 -----------------WMAPEVI--SRLPYGTEVDIWSLGIMVIEMIDGEP-------- 239
Query: 297 KMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFFRDDTRLRALRF 356
Y N P LQ M +S P D + + LR F
Sbjct: 240 -PYFNE-----------------PPLQAMRRIRDSLPPRVKD-----LHKVSSVLRG--F 274
Query: 357 LDHMLERDNMQKS 369
LD ML R+ Q++
Sbjct: 275 LDLMLVREPSQRA 287
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 82/173 (47%), Gaps = 23/173 (13%)
Query: 117 HPGIVHVVQAMDENKNAMAMVTEPL-FASVANVLGNFENVSKVPRELKGLEMSLLEMKHG 175
H +V+++ A + + ++ E F +++ L + N VP + + L L ++H
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-EFVPYKPEDLYKDFLTLEHL 150
Query: 176 L---LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQ 232
+ Q+A+ +EFL S + IHR ++ NIL++ K+ FG A + D V+
Sbjct: 151 IXYSFQVAKGMEFLASR-KXIHRDLAARNILLSEKNVVKICDFGLARDIXK---DPDXVR 206
Query: 233 AFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
D+ LPL+ + APE + + + SD++SFG + + + +
Sbjct: 207 K--------GDARLPLK----WMAPETIFDRV--YTIQSDVWSFGVLLWEIFS 245
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 108/261 (41%), Gaps = 60/261 (22%)
Query: 39 YELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLTKSAE 98
Y +L QIGS G S++ V ++ Q ++ + L EA + + E
Sbjct: 58 YSILKQIGSGG--------SSKVFQVLNEKKQ-----IYAIKYVNLEEADNQTLDSYRNE 104
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKV 158
A+L+ ++ + K++RL I + MV E + + L +++
Sbjct: 105 IAYLNKLQQHSDKIIRLYDYEIT---------DQYIYMVMECGNIDLNSWLKKKKSID-- 153
Query: 159 PRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFA 218
P E K ++LE H + Q ++H + P N LI +G KL FG A
Sbjct: 154 PWERKSYWKNMLEAVHTIHQHG-----------IVHSDLKPANFLIV-DGMLKLIDFGIA 201
Query: 219 ISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNS---------FGC 269
+Q D+++V V+DS + ++NY PE ++ ++S
Sbjct: 202 ---NQMQPDTTSV---------VKDSQVG---AVNYMPPEAIKDMSSSRENGKSKSKISP 246
Query: 270 SSDIFSFGCVAYHLIARKPLF 290
SD++S GC+ Y++ K F
Sbjct: 247 KSDVWSLGCILYYMTYGKTPF 267
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 79/210 (37%), Gaps = 46/210 (21%)
Query: 169 LLEMKHGLL---------QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAI 219
+LE+ GL Q+ E+L FLHS R+IHR + N+L+T G +L FG +
Sbjct: 99 MLELDRGLTEPQIQVVCRQMLEALNFLHSK-RIIHRDLKAGNVLMTLEGDIRLADFGVSA 157
Query: 220 STDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKT---NSFGCSSDIFSF 276
+ + + Y + APE+V +T + +DI+S
Sbjct: 158 KNLKTLQKRDSFIGTPY-----------------WMAPEVVMCETMKDTPYDYKADIWSL 200
Query: 277 GCVAYHLIARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPD---------LQKMLS 327
G + +P +N + L A S P+ L P L+ L
Sbjct: 201 GITLIEMAQIEP-------PHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALD 253
Query: 328 ANESFRPTAMDFTGSRFFRDDTRLRALRFL 357
N RP+A F T +ALR L
Sbjct: 254 KNPETRPSAAQLLEHPFVSSITSNKALREL 283
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 86/209 (41%), Gaps = 43/209 (20%)
Query: 114 RLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRE------------ 161
RL+ PG A+ K F S A+++G FE+ + + E
Sbjct: 36 RLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMIL 95
Query: 162 --------------LKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSN 207
L + +++++ L IA + +L + +HR ++ NIL+ SN
Sbjct: 96 TEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL-AEMSYVHRDLAARNILVNSN 154
Query: 208 GAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSF 267
K+ FG + ++ SD + E S L + + +TAPE + + F
Sbjct: 155 LVCKVSDFGLSRFLEENSSDPT------------ETSSLGGKIPIRWTAPEAIAFR--KF 200
Query: 268 GCSSDIFSFGCVAYHLI--ARKPLFDCNN 294
+SD +S+G V + ++ +P +D +N
Sbjct: 201 TSASDAWSYGIVMWEVMSFGERPYWDMSN 229
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 38/188 (20%)
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVT-EPLFASVANVL-GNFENVS 156
DAFL A+A + +L+H +V + A+VT EP++ + G+ +
Sbjct: 59 DAFL----AEANLMKQLQHQRLVRLY----------AVVTQEPIYIITEYMENGSLVDFL 104
Query: 157 KVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFG 216
K P +K LL+M QIAE + F+ IHR + NIL++ + K+ FG
Sbjct: 105 KTPSGIKLTINKLLDMAA---QIAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFG 160
Query: 217 FAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSF 276
A + I D+ E + P++ +TAPE + T F SD++SF
Sbjct: 161 LA----RLIEDNEXTAR--------EGAKFPIK----WTAPEAINYGT--FTIKSDVWSF 202
Query: 277 GCVAYHLI 284
G + ++
Sbjct: 203 GILLTEIV 210
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 73/182 (40%), Gaps = 41/182 (22%)
Query: 114 RLRHPGIVHVVQAMDENKNAMAMVTEPLFA-------SVANVLGNFENVSKVPRELKGLE 166
+L HP +V + D +A PL A + L FEN GL+
Sbjct: 68 KLNHPNVVSAREVPD-GLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCC-------GLK 119
Query: 167 MSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGA---WKLGGFGFAISTDQ 223
++ L I+ +L +LH N R+IHR + PENI++ K+ G+A DQ
Sbjct: 120 EG--PIRTLLSDISSALRYLHEN-RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ 176
Query: 224 AISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
+ V +L Y APEL+ K + + D +SFG +A+
Sbjct: 177 GELCTEFV------------------GTLQYLAPELLEQK--KYTVTVDYWSFGTLAFEC 216
Query: 284 IA 285
I
Sbjct: 217 IT 218
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 73/182 (40%), Gaps = 41/182 (22%)
Query: 114 RLRHPGIVHVVQAMDENKNAMAMVTEPLFA-------SVANVLGNFENVSKVPRELKGLE 166
+L HP +V + D +A PL A + L FEN GL+
Sbjct: 69 KLNHPNVVSAREVPD-GLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCC-------GLK 120
Query: 167 MSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGA---WKLGGFGFAISTDQ 223
++ L I+ +L +LH N R+IHR + PENI++ K+ G+A DQ
Sbjct: 121 EG--PIRTLLSDISSALRYLHEN-RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ 177
Query: 224 AISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
+ V +L Y APEL+ K + + D +SFG +A+
Sbjct: 178 GELCTEFV------------------GTLQYLAPELLEQK--KYTVTVDYWSFGTLAFEC 217
Query: 284 IA 285
I
Sbjct: 218 IT 219
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 40/189 (21%)
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVT-EPLFASVANVL-GNFENVS 156
DAFL A+A + +L+H +V + A+VT EP++ + G+ +
Sbjct: 48 DAFL----AEANLMKQLQHQRLVRLY----------AVVTQEPIYIITEYMENGSLVDFL 93
Query: 157 KVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFG 216
K P +K LL+M QIAE + F+ IHR + NIL++ + K+ FG
Sbjct: 94 KTPSGIKLTINKLLDMAA---QIAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFG 149
Query: 217 FAISTDQAISDSSNVQAFHYAEYDV-EDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFS 275
A + I D+ EY E + P++ +TAPE + T F SD++S
Sbjct: 150 LA----RLIEDN---------EYTAREGAKFPIK----WTAPEAINYGT--FTIKSDVWS 190
Query: 276 FGCVAYHLI 284
FG + ++
Sbjct: 191 FGILLTEIV 199
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 79/210 (37%), Gaps = 46/210 (21%)
Query: 169 LLEMKHGLL---------QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAI 219
+LE+ GL Q+ E+L FLHS R+IHR + N+L+T G +L FG +
Sbjct: 107 MLELDRGLTEPQIQVVCRQMLEALNFLHSK-RIIHRDLKAGNVLMTLEGDIRLADFGVSA 165
Query: 220 STDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKT---NSFGCSSDIFSF 276
+ + + Y + APE+V +T + +DI+S
Sbjct: 166 KNLKTLQKRDSFIGTPY-----------------WMAPEVVMCETMKDTPYDYKADIWSL 208
Query: 277 GCVAYHLIARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPD---------LQKMLS 327
G + +P +N + L A S P+ L P L+ L
Sbjct: 209 GITLIEMAQIEP-------PHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALD 261
Query: 328 ANESFRPTAMDFTGSRFFRDDTRLRALRFL 357
N RP+A F T +ALR L
Sbjct: 262 KNPETRPSAAQLLEHPFVSSITSNKALREL 291
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 38/188 (20%)
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVT-EPLFASVANVL-GNFENVS 156
DAFL A+A + +L+H +V + A+VT EP++ + G+ +
Sbjct: 53 DAFL----AEANLMKQLQHQRLVRLY----------AVVTQEPIYIITEYMENGSLVDFL 98
Query: 157 KVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFG 216
K P +K LL+M QIAE + F+ IHR + NIL++ + K+ FG
Sbjct: 99 KTPSGIKLTINKLLDMAA---QIAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFG 154
Query: 217 FAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSF 276
A + I D+ E + P++ +TAPE + T F SD++SF
Sbjct: 155 LA----RLIEDAEXTAR--------EGAKFPIK----WTAPEAINYGT--FTIKSDVWSF 196
Query: 277 GCVAYHLI 284
G + ++
Sbjct: 197 GILLTEIV 204
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 40/189 (21%)
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVT-EPLFASVANVL-GNFENVS 156
DAFL A+A + +L+H +V + A+VT EP++ + G+ +
Sbjct: 53 DAFL----AEANLMKQLQHQRLVRLY----------AVVTQEPIYIITEYMENGSLVDFL 98
Query: 157 KVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFG 216
K P +K LL+M QIAE + F+ IHR + NIL++ + K+ FG
Sbjct: 99 KTPSGIKLTINKLLDMAA---QIAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFG 154
Query: 217 FAISTDQAISDSSNVQAFHYAEYDV-EDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFS 275
A + I D+ EY E + P++ +TAPE + T F SD++S
Sbjct: 155 LA----RLIEDN---------EYTAREGAKFPIK----WTAPEAINYGT--FTIKSDVWS 195
Query: 276 FGCVAYHLI 284
FG + ++
Sbjct: 196 FGILLTEIV 204
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 105/246 (42%), Gaps = 51/246 (20%)
Query: 39 YELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLTKSAE 98
+ELL +G G + + R VTR + + + + VL K+A + R R TK
Sbjct: 30 FELLKVLGQGSFGKVFLV-----RKVTRPDSGH-LYAMKVL-KKATLKVRDRV-RTKMER 81
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKV 158
D D+ HP +V K A TE + + L + +++
Sbjct: 82 DILADV-----------NHPFVV---------KLHYAFQTEGKLYLILDFLRGGDLFTRL 121
Query: 159 PRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFA 218
+E+ E ++K L ++A L+ LHS +I+R + PENIL+ G KL FG
Sbjct: 122 SKEVMFTEE---DVKFYLAELALGLDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGL- 176
Query: 219 ISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGC 278
+ +AI +F ++ Y APE+V + +S S+D +S+G
Sbjct: 177 --SKEAIDHEKKAYSF--------------CGTVEYMAPEVVNRQGHS--HSADWWSYGV 218
Query: 279 VAYHLI 284
+ + ++
Sbjct: 219 LMFEML 224
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 6/116 (5%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
L QIA + LHS ++IHR + P+NIL++++ + A + ISD +
Sbjct: 121 LRQIASGVAHLHS-LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 179
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTN-----SFGCSSDIFSFGCVAYHLIAR 286
+ ++ + + APEL+ N S DIFS GCV Y+++++
Sbjct: 180 SGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN++I G ++ FG A
Sbjct: 149 QIVLTFEYLHS-LDLIYRDLKPENLMIDQQGYIQVTDFGLAKR----------------- 190
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + Y APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 191 ---VKGRTWXLCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 246 IYEKIVS-----GKVRFPSHFSSDLKDLL 269
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 32/175 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAIS-TDQAISDSSNVQAF 234
L +I + L++LHS + IHR I N+L++ +G KL FG A TD I ++ V
Sbjct: 130 LREILKGLDYLHSEKK-IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGT- 187
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNN 294
P + APE++ K +++ +DI+S G A L +P
Sbjct: 188 ------------PF-----WMAPEVI--KQSAYDSKADIWSLGITAIELARGEP-----P 223
Query: 295 NVKMY-MNTLTYLSSDAFSSIPSDLVPDLQKMLSA----NESFRPTAMDFTGSRF 344
+ +++ M L + + ++ + L++ + A SFRPTA + +F
Sbjct: 224 HSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 278
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 32/193 (16%)
Query: 152 FENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITS---NG 208
FE++ V RE S + H + QI E++ H ++HR + PEN+L+ S
Sbjct: 91 FEDI--VAREY----YSEADASHCIQQILEAVLHCHQMG-VVHRDLKPENLLLASKCKGA 143
Query: 209 AWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFG 268
A KL FG AI + QA+ + Y +PE++R + ++G
Sbjct: 144 AVKLADFGLAIEV------QGDQQAW-----------FGFAGTPGYLSPEVLRKE--AYG 184
Query: 269 CSSDIFSFGCVAYHLIARKPLFDCNNNVKMY--MNTLTY-LSSDAFSSIPSDLVPDLQKM 325
DI++ G + Y L+ P F + K+Y + Y S + ++ + + +M
Sbjct: 185 KPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQM 244
Query: 326 LSANESFRPTAMD 338
L+ N + R TA +
Sbjct: 245 LTINPAKRITAHE 257
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 21/122 (17%)
Query: 176 LLQIAESLEFLH-SNARLIHRAISPENILIT-SNGAWKLGGFGFAISTDQAISDSSNVQA 233
L Q+ S+ LH + + HR I P N+L+ ++G KL FG A + +S S A
Sbjct: 135 LFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSA----KKLSPSEPNVA 190
Query: 234 FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCN 293
+ + Y Y APEL+ + + + DI+S GC+ ++ +P+F +
Sbjct: 191 YICSRY--------------YRAPELIFGNQH-YTTAVDIWSVGCIFAEMMLGEPIFRGD 235
Query: 294 NN 295
N+
Sbjct: 236 NS 237
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 40/189 (21%)
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVT-EPLFASVANVL-GNFENVS 156
DAFL A+A + +L+H +V + A+VT EP++ + G+ +
Sbjct: 49 DAFL----AEANLMKQLQHQRLVRLY----------AVVTQEPIYIITEYMENGSLVDFL 94
Query: 157 KVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFG 216
K P +K LL+M QIAE + F+ IHR + NIL++ + K+ FG
Sbjct: 95 KTPSGIKLTINKLLDMAA---QIAEGMAFIEER-NYIHRNLRAANILVSDTLSCKIADFG 150
Query: 217 FAISTDQAISDSSNVQAFHYAEYDV-EDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFS 275
A + I D+ EY E + P++ +TAPE + T F SD++S
Sbjct: 151 LA----RLIEDN---------EYTAREGAKFPIK----WTAPEAINYGT--FTIKSDVWS 191
Query: 276 FGCVAYHLI 284
FG + ++
Sbjct: 192 FGILLTEIV 200
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 22/125 (17%)
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAI-SDSSN 230
+K L Q+ + L F HS ++HR + P+N+LI NG KL FG A + + S+
Sbjct: 103 VKSFLFQLLKGLGFCHSR-NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAE 161
Query: 231 VQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI-ARKPL 289
V Y DV L +K + S D++S GC+ L A +PL
Sbjct: 162 VVTLWYRPPDV-----------------LFGAKL--YSTSIDMWSAGCIFAELANAGRPL 202
Query: 290 FDCNN 294
F N+
Sbjct: 203 FPGND 207
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 19/109 (17%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + +E+L R IHR ++ NIL+ + K+G FG Q + + F
Sbjct: 122 QICKGMEYL-GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ------DKEFFKVK 174
Query: 238 EYDVEDSMLPLQPSLNYTAPE-LVRSKTNSFGCSSDIFSFGCVAYHLIA 285
E P + + + APE L SK F +SD++SFG V Y L
Sbjct: 175 E--------PGESPIFWYAPESLTESK---FSVASDVWSFGVVLYELFT 212
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 79/193 (40%), Gaps = 41/193 (21%)
Query: 102 LDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRE 161
+D++R +G HP I+ + + N F V +++ E + +
Sbjct: 61 VDILRKVSG------HPNIIQLKDTYETNT---------FFFLVFDLMKKGELFDYLTEK 105
Query: 162 LKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAIST 221
+ E ++ LL++ +L L+ ++HR + PENIL+ + KL FGF+
Sbjct: 106 VTLSEKETRKIMRALLEVICALHKLN----IVHRDLKPENILLDDDMNIKLTDFGFSCQL 161
Query: 222 DQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTN----SFGCSSDIFSFG 277
D + + + + +Y APE++ N +G D++S G
Sbjct: 162 DPG------------------EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTG 203
Query: 278 CVAYHLIARKPLF 290
+ Y L+A P F
Sbjct: 204 VIMYTLLAGSPPF 216
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 38/188 (20%)
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVT-EPLFASVANVL-GNFENVS 156
DAFL A+A + +L+H +V + A+VT EP++ + G+ +
Sbjct: 61 DAFL----AEANLMKQLQHQRLVRLY----------AVVTQEPIYIITEYMENGSLVDFL 106
Query: 157 KVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFG 216
K P +K LL+M QIAE + F+ IHR + NIL++ + K+ FG
Sbjct: 107 KTPSGIKLTINKLLDMAA---QIAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFG 162
Query: 217 FAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSF 276
A + I D+ E + P++ +TAPE + T F SD++SF
Sbjct: 163 LA----RLIEDNEXTAR--------EGAKFPIK----WTAPEAINYGT--FTIKSDVWSF 204
Query: 277 GCVAYHLI 284
G + ++
Sbjct: 205 GILLTEIV 212
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 23/128 (17%)
Query: 158 VPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGF 217
+PR GL LL + QI E + +LH+ IHR ++ N+L+ ++ K+G FG
Sbjct: 126 LPRHSIGLAQLLLFAQ----QICEGMAYLHAQ-HYIHRDLAARNVLLDNDRLVKIGDFGL 180
Query: 218 AISTDQAISDSSNVQAFHYAEYDV-EDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSF 276
A + + + Y V ED P + + APE + K F +SD++SF
Sbjct: 181 AKAVPEG-----------HEXYRVREDGDSP----VFWYAPECL--KEYKFYYASDVWSF 223
Query: 277 GCVAYHLI 284
G Y L+
Sbjct: 224 GVTLYELL 231
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 38/188 (20%)
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVT-EPLFASVANVL-GNFENVS 156
DAFL A+A + +L+H +V + A+VT EP++ + G+ +
Sbjct: 55 DAFL----AEANLMKQLQHQRLVRLY----------AVVTQEPIYIITEYMENGSLVDFL 100
Query: 157 KVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFG 216
K P +K LL+M QIAE + F+ IHR + NIL++ + K+ FG
Sbjct: 101 KTPSGIKLTINKLLDMAA---QIAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFG 156
Query: 217 FAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSF 276
A + I D+ E + P++ +TAPE + T F SD++SF
Sbjct: 157 LA----RLIEDNEXTAR--------EGAKFPIK----WTAPEAINYGT--FTIKSDVWSF 198
Query: 277 GCVAYHLI 284
G + ++
Sbjct: 199 GILLTEIV 206
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 13/111 (11%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS----DSSNVQA 233
QI E+L ++HS +IHR + P NI I + K+G FG A + +++ DS N+
Sbjct: 124 QILEALSYIHSQG-IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 234 FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
D++ + Y A E++ T + D++S G + + +I
Sbjct: 183 -------SSDNLTSAIGTAMYVATEVL-DGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 38/188 (20%)
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVT-EPLFASVANVL-GNFENVS 156
DAFL A+A + +L+H +V + A+VT EP++ + G+ +
Sbjct: 54 DAFL----AEANLMKQLQHQRLVRLY----------AVVTQEPIYIITEYMENGSLVDFL 99
Query: 157 KVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFG 216
K P +K LL+M QIAE + F+ IHR + NIL++ + K+ FG
Sbjct: 100 KTPSGIKLTINKLLDMAA---QIAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFG 155
Query: 217 FAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSF 276
A + I D+ E + P++ +TAPE + T F SD++SF
Sbjct: 156 LA----RLIEDNEXTAR--------EGAKFPIK----WTAPEAINYGT--FTIKSDVWSF 197
Query: 277 GCVAYHLI 284
G + ++
Sbjct: 198 GILLTEIV 205
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 38/188 (20%)
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVT-EPLFASVANVL-GNFENVS 156
DAFL A+A + +L+H +V + A+VT EP++ + G+ +
Sbjct: 53 DAFL----AEANLMKQLQHQRLVRLY----------AVVTQEPIYIITEYMENGSLVDFL 98
Query: 157 KVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFG 216
K P +K LL+M QIAE + F+ IHR + NIL++ + K+ FG
Sbjct: 99 KTPSGIKLTINKLLDMAA---QIAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFG 154
Query: 217 FAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSF 276
A + I D+ E + P++ +TAPE + T F SD++SF
Sbjct: 155 LA----RLIEDNEXTAR--------EGAKFPIK----WTAPEAINYGT--FTIKSDVWSF 196
Query: 277 GCVAYHLI 284
G + ++
Sbjct: 197 GILLTEIV 204
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 38/188 (20%)
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVT-EPLFASVANVL-GNFENVS 156
DAFL A+A + +L+H +V + A+VT EP++ + G+ +
Sbjct: 62 DAFL----AEANLMKQLQHQRLVRLY----------AVVTQEPIYIITEYMENGSLVDFL 107
Query: 157 KVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFG 216
K P +K LL+M QIAE + F+ IHR + NIL++ + K+ FG
Sbjct: 108 KTPSGIKLTINKLLDMAA---QIAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFG 163
Query: 217 FAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSF 276
A + I D+ E + P++ +TAPE + T F SD++SF
Sbjct: 164 LA----RLIEDNEXTAR--------EGAKFPIK----WTAPEAINYGT--FTIKSDVWSF 205
Query: 277 GCVAYHLI 284
G + ++
Sbjct: 206 GILLTEIV 213
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 6/116 (5%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
L QIA + LHS ++IHR + P+NIL++++ + A + ISD +
Sbjct: 121 LRQIASGVAHLHS-LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 179
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTN-----SFGCSSDIFSFGCVAYHLIAR 286
+ ++ + + APEL+ N S DIFS GCV Y+++++
Sbjct: 180 SGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 13/111 (11%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS----DSSNVQA 233
QI E+L ++HS +IHR + P NI I + K+G FG A + +++ DS N+
Sbjct: 124 QILEALSYIHSQG-IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 234 FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
D++ + Y A E++ T + D++S G + + +I
Sbjct: 183 -------SSDNLTSAIGTAMYVATEVL-DGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A T
Sbjct: 138 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-------------- 182
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 183 ------ADEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 235
Query: 296 V 296
+
Sbjct: 236 I 236
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 28/149 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + E+LHS LI+R + PEN+LI G ++ FGFA
Sbjct: 149 QIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----------------- 190
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
V+ L + APE++ SK + + D ++ G + Y + A P F + ++
Sbjct: 191 ---VKGRTWXLCGTPEALAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
+Y ++ PS DL+ +L
Sbjct: 246 IYEKIVS-----GKVRFPSHFSSDLKDLL 269
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 105/261 (40%), Gaps = 60/261 (22%)
Query: 39 YELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLTKSAE 98
Y +L QIGS G S++ V ++ Q ++ + L EA + + E
Sbjct: 30 YSILKQIGSGG--------SSKVFQVLNEKKQ-----IYAIKYVNLEEADNQTLDSYRNE 76
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKV 158
A+L+ ++ + K++RL I + MV E + + L +++
Sbjct: 77 IAYLNKLQQHSDKIIRLYDYEIT---------DQYIYMVMECGNIDLNSWLKKKKSID-- 125
Query: 159 PRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFA 218
P E K ++LE H + Q ++H + P N LI +G KL FG A
Sbjct: 126 PWERKSYWKNMLEAVHTIHQHG-----------IVHSDLKPANFLIV-DGMLKLIDFGIA 173
Query: 219 ISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNS---------FGC 269
+Q D V V+DS + ++NY PE ++ ++S
Sbjct: 174 ---NQMQPDXXXV---------VKDSQVG---TVNYMPPEAIKDMSSSRENGKSKSKISP 218
Query: 270 SSDIFSFGCVAYHLIARKPLF 290
SD++S GC+ Y++ K F
Sbjct: 219 KSDVWSLGCILYYMTYGKTPF 239
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A T
Sbjct: 138 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-------------- 182
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 183 ------ADEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 235
Query: 296 V 296
+
Sbjct: 236 I 236
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 24/139 (17%)
Query: 163 KGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGA-----WKLGGFGF 217
K ++S+ +K L Q+ + F HS R +HR + P+N+L++ + A K+G FG
Sbjct: 125 KNPDVSMRVIKSFLYQLINGVNFCHSR-RCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183
Query: 218 AISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFG 277
A +AF ++ +L Y PE++ + + S DI+S
Sbjct: 184 A-------------RAFGIPIRQFTHEII----TLWYRPPEILLG-SRHYSTSVDIWSIA 225
Query: 278 CVAYHLIARKPLFDCNNNV 296
C+ ++ + PLF ++ +
Sbjct: 226 CIWAEMLMKTPLFPGDSEI 244
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 38/188 (20%)
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVT-EPLFASVANVL-GNFENVS 156
DAFL A+A + +L+H +V + A+VT EP++ + G+ +
Sbjct: 53 DAFL----AEANLMKQLQHQRLVRLY----------AVVTQEPIYIITEYMENGSLVDFL 98
Query: 157 KVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFG 216
K P +K LL+M QIAE + F+ IHR + NIL++ + K+ FG
Sbjct: 99 KTPSGIKLTINKLLDMAA---QIAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFG 154
Query: 217 FAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSF 276
A + I D+ E + P++ +TAPE + T F SD++SF
Sbjct: 155 LA----RLIEDNEXTAR--------EGAKFPIK----WTAPEAINYGT--FTIKSDVWSF 196
Query: 277 GCVAYHLI 284
G + ++
Sbjct: 197 GILLTEIV 204
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 33/182 (18%)
Query: 115 LRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKH 174
L HP IV ++ ++E + M P + + + L +N LK L + L
Sbjct: 82 LDHPHIVKLIGIIEEEPTWIIMELYP-YGELGHYLERNKN------SLKVLTLVLYS--- 131
Query: 175 GLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAF 234
LQI +++ +L S +HR I+ NIL+ S KLG FG + + I D
Sbjct: 132 --LQICKAMAYLES-INCVHRDIAVRNILVASPECVKLGDFGLS----RYIEDEDY---- 180
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA--RKPLFDC 292
Y + LP++ + +PE + + F +SD++ F + +++ ++P F
Sbjct: 181 ----YKASVTRLPIK----WMSPESINFR--RFTTASDVWMFAVCMWEILSFGKQPFFWL 230
Query: 293 NN 294
N
Sbjct: 231 EN 232
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 22/125 (17%)
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAI-SDSSN 230
+K L Q+ + L F HS ++HR + P+N+LI NG KL FG A + + S+
Sbjct: 103 VKSFLFQLLKGLGFCHSR-NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAE 161
Query: 231 VQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI-ARKPL 289
V Y DV L +K + S D++S GC+ L A +PL
Sbjct: 162 VVTLWYRPPDV-----------------LFGAKL--YSTSIDMWSAGCIFAELANAARPL 202
Query: 290 FDCNN 294
F N+
Sbjct: 203 FPGND 207
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 79/193 (40%), Gaps = 41/193 (21%)
Query: 102 LDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRE 161
+D++R +G HP I+ + + N F V +++ E + +
Sbjct: 74 VDILRKVSG------HPNIIQLKDTYETNT---------FFFLVFDLMKKGELFDYLTEK 118
Query: 162 LKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAIST 221
+ E ++ LL++ +L L+ ++HR + PENIL+ + KL FGF+
Sbjct: 119 VTLSEKETRKIMRALLEVICALHKLN----IVHRDLKPENILLDDDMNIKLTDFGFSCQL 174
Query: 222 DQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTN----SFGCSSDIFSFG 277
D + + + + +Y APE++ N +G D++S G
Sbjct: 175 DPG------------------EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTG 216
Query: 278 CVAYHLIARKPLF 290
+ Y L+A P F
Sbjct: 217 VIMYTLLAGSPPF 229
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ FG A T
Sbjct: 138 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-------------- 182
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 183 ------ADEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 235
Query: 296 V 296
+
Sbjct: 236 I 236
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 19/109 (17%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + +E+L R IHR ++ NIL+ + K+G FG Q
Sbjct: 123 QICKGMEYL-GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKE----------- 170
Query: 238 EYDVEDSMLPLQPSLNYTAPE-LVRSKTNSFGCSSDIFSFGCVAYHLIA 285
Y V++ P + + + APE L SK F +SD++SFG V Y L
Sbjct: 171 YYKVKE---PGESPIFWYAPESLTESK---FSVASDVWSFGVVLYELFT 213
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 79/193 (40%), Gaps = 41/193 (21%)
Query: 102 LDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRE 161
+D++R +G HP I+ + + N F V +++ E + +
Sbjct: 74 VDILRKVSG------HPNIIQLKDTYETNT---------FFFLVFDLMKKGELFDYLTEK 118
Query: 162 LKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAIST 221
+ E ++ LL++ +L L+ ++HR + PENIL+ + KL FGF+
Sbjct: 119 VTLSEKETRKIMRALLEVICALHKLN----IVHRDLKPENILLDDDMNIKLTDFGFSCQL 174
Query: 222 DQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTN----SFGCSSDIFSFG 277
D + + + + +Y APE++ N +G D++S G
Sbjct: 175 DPG------------------EKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTG 216
Query: 278 CVAYHLIARKPLF 290
+ Y L+A P F
Sbjct: 217 VIMYTLLAGSPPF 229
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 31/158 (19%)
Query: 128 DENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLH 187
D+ + ++ +V E + LG+ + +PR GL LL + QI E + +LH
Sbjct: 87 DQGEKSLQLVMEYV------PLGSLRDY--LPRHSIGLAQLLLFAQ----QICEGMAYLH 134
Query: 188 SNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDV-EDSML 246
+ IHR ++ N+L+ ++ K+G FG A + + + Y V ED
Sbjct: 135 AQ-HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG-----------HEYYRVREDGDS 182
Query: 247 PLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
P + + APE + K F +SD++SFG Y L+
Sbjct: 183 P----VFWYAPECL--KEYKFYYASDVWSFGVTLYELL 214
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 36/189 (19%)
Query: 105 VRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKG 164
++ + L RHP I+ + Q + + MV E + S + F+ + K R
Sbjct: 58 IKREIQNLKLFRHPHIIKLYQVISTPTDFF-MVME--YVSGGEL---FDYICKHGR---- 107
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFA--ISTD 222
+ +E + QI ++++ H + ++HR + PEN+L+ ++ K+ FG + +S
Sbjct: 108 --VEEMEARRLFQQILSAVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164
Query: 223 QAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYH 282
+ + DS S NY APE++ + + G DI+S G + Y
Sbjct: 165 EFLRDSCG--------------------SPNYAAPEVISGRLYA-GPEVDIWSCGVILYA 203
Query: 283 LIARKPLFD 291
L+ FD
Sbjct: 204 LLCGTLPFD 212
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 32/180 (17%)
Query: 115 LRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKH 174
L HP IV + + + E + + +V E +AS V + + E +
Sbjct: 70 LNHPNIVKLFEVI-ETEKTLYLVXE--YASGGEVFDYLVAHGRXKEK---------EARA 117
Query: 175 GLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAF 234
QI ++++ H ++HR + EN+L+ ++ K+ FGF+
Sbjct: 118 KFRQIVSAVQYCHQKF-IVHRDLKAENLLLDADXNIKIADFGFS---------------- 160
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNN 294
E+ + + + Y APEL + K G D++S G + Y L++ FD N
Sbjct: 161 --NEFTFGNKLDAFCGAPPYAAPELFQGKKYD-GPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 94/247 (38%), Gaps = 53/247 (21%)
Query: 45 IGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLTKSAEDAFLDL 104
IG G G K+Y A+ ++ + VL A A+ TKS E+ +
Sbjct: 42 IGELGDGAFGKVYKAQNKETS------------VL-------AAAKVIDTKSEEELEDYM 82
Query: 105 VRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKG 164
V D L HP IV ++ A N ++ +V V+ E R L
Sbjct: 83 VEIDI--LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE------RPLTE 134
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
++ ++ Q ++L +LH N ++IHR + NIL T +G KL FG + +
Sbjct: 135 SQIQVV-----CKQTLDALNYLHDN-KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT 188
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELV---RSKTNSFGCSSDIFSFGCVAY 281
I + Y + APE+V SK + +D++S G
Sbjct: 189 IQRRDSFIGTPY-----------------WMAPEVVMCETSKDRPYDYKADVWSLGITLI 231
Query: 282 HLIARKP 288
+ +P
Sbjct: 232 EMAEIEP 238
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 61/155 (39%), Gaps = 24/155 (15%)
Query: 182 SLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDV 241
+L LHS L+H + P NI + G KLG FG + A + VQ E D
Sbjct: 169 ALAHLHSQG-LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA--GAGEVQ-----EGDP 220
Query: 242 EDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVKMYMN 301
Y APEL++ S+G ++D+FS G + L +
Sbjct: 221 -----------RYMAPELLQ---GSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQ 266
Query: 302 TLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTA 336
YL + + + S+L L ML + R TA
Sbjct: 267 --GYLPPEFTAGLSSELRSVLVMMLEPDPKLRATA 299
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 84/175 (48%), Gaps = 25/175 (14%)
Query: 117 HPGIVHVVQAMDENKNAMAMVTEPL-FASVANVLGNFENVSKVPREL--KGLEMSLLEMK 173
H +V+++ A + + ++TE F +++ L + N VP ++ + L L ++
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRN-EFVPYKVAPEDLYKDFLTLE 139
Query: 174 HGL---LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSN 230
H + Q+A+ +EFL S + IHR ++ NIL++ K+ FG A + D
Sbjct: 140 HLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIXK---DPDX 195
Query: 231 VQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
V+ D+ LPL+ + APE + + + SD++SFG + + + +
Sbjct: 196 VRK--------GDARLPLK----WMAPETIFDRVYTI--QSDVWSFGVLLWEIFS 236
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ F A TD
Sbjct: 131 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFYLARHTD------------- 176
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 177 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 296 V 296
+
Sbjct: 229 I 229
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 19/109 (17%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + +E+L R IHR ++ NIL+ + K+G FG Q + V+
Sbjct: 126 QICKGMEYL-GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD-KEXXKVKE---- 179
Query: 238 EYDVEDSMLPLQPSLNYTAPE-LVRSKTNSFGCSSDIFSFGCVAYHLIA 285
P + + + APE L SK F +SD++SFG V Y L
Sbjct: 180 ---------PGESPIFWYAPESLTESK---FSVASDVWSFGVVLYELFT 216
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 19/109 (17%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + +E+L R IHR ++ NIL+ + K+G FG Q + V+
Sbjct: 121 QICKGMEYL-GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD-KEXXKVKE---- 174
Query: 238 EYDVEDSMLPLQPSLNYTAPE-LVRSKTNSFGCSSDIFSFGCVAYHLIA 285
P + + + APE L SK F +SD++SFG V Y L
Sbjct: 175 ---------PGESPIFWYAPESLTESK---FSVASDVWSFGVVLYELFT 211
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ G A TD
Sbjct: 131 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDAGLARHTD------------- 176
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 177 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 296 V 296
+
Sbjct: 229 I 229
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 61/128 (47%), Gaps = 20/128 (15%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
+I+ L FLH +I+R + +N+++ S G K+ FG + + D + F
Sbjct: 128 EISIGLFFLHKRG-IIYRDLKLDNVMLDSEGHIKIADFGMC---KEHMMDGVTTREF--- 180
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
+ +Y APE++ + +G S D +++G + Y ++A +P FD + +
Sbjct: 181 -----------CGTPDYIAPEIIAYQ--PYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE 227
Query: 298 MYMNTLTY 305
++ + + +
Sbjct: 228 LFQSIMEH 235
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 83/175 (47%), Gaps = 25/175 (14%)
Query: 117 HPGIVHVVQAMDENKNAMAMVTEPL-FASVANVLGNFENVSKVPREL--KGLEMSLLEMK 173
H +V+++ A + + ++TE F +++ L + N VP ++ + L L ++
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRN-EFVPYKVAPEDLYKDFLTLE 139
Query: 174 HGL---LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSN 230
H + Q+A+ +EFL S + IHR ++ NIL++ K+ FG A D
Sbjct: 140 HLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLA---RDIYKDPDY 195
Query: 231 VQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
V+ D+ LPL+ + APE + + + SD++SFG + + + +
Sbjct: 196 VRK--------GDARLPLK----WMAPETIFDRVYTI--QSDVWSFGVLLWEIFS 236
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 19/109 (17%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + +E+L R IHR ++ NIL+ + K+G FG Q + V+
Sbjct: 120 QICKGMEYL-GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD-KEXXKVKE---- 173
Query: 238 EYDVEDSMLPLQPSLNYTAPE-LVRSKTNSFGCSSDIFSFGCVAYHLIA 285
P + + + APE L SK F +SD++SFG V Y L
Sbjct: 174 ---------PGESPIFWYAPESLTESK---FSVASDVWSFGVVLYELFT 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 19/109 (17%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + +E+L R IHR ++ NIL+ + K+G FG Q + V+
Sbjct: 122 QICKGMEYL-GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD-KEXXKVKE---- 175
Query: 238 EYDVEDSMLPLQPSLNYTAPE-LVRSKTNSFGCSSDIFSFGCVAYHLIA 285
P + + + APE L SK F +SD++SFG V Y L
Sbjct: 176 ---------PGESPIFWYAPESLTESK---FSVASDVWSFGVVLYELFT 212
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 94/247 (38%), Gaps = 53/247 (21%)
Query: 45 IGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLTKSAEDAFLDL 104
IG G G K+Y A+ ++ + VL A A+ TKS E+ +
Sbjct: 42 IGELGDGAFGKVYKAQNKETS------------VL-------AAAKVIDTKSEEELEDYM 82
Query: 105 VRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKG 164
V D L HP IV ++ A N ++ +V V+ E R L
Sbjct: 83 VEIDI--LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE------RPLTE 134
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
++ ++ Q ++L +LH N ++IHR + NIL T +G KL FG + +
Sbjct: 135 SQIQVV-----CKQTLDALNYLHDN-KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRX 188
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELV---RSKTNSFGCSSDIFSFGCVAY 281
I + Y + APE+V SK + +D++S G
Sbjct: 189 IQRRDSFIGTPY-----------------WMAPEVVMCETSKDRPYDYKADVWSLGITLI 231
Query: 282 HLIARKP 288
+ +P
Sbjct: 232 EMAEIEP 238
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 83/175 (47%), Gaps = 25/175 (14%)
Query: 117 HPGIVHVVQAMDENKNAMAMVTEPL-FASVANVLGNFENVSKVPREL--KGLEMSLLEMK 173
H +V+++ A + + ++TE F +++ L + N VP ++ + L L ++
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRN-EFVPYKVAPEDLYKDFLTLE 139
Query: 174 HGL---LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSN 230
H + Q+A+ +EFL S + IHR ++ NIL++ K+ FG A D
Sbjct: 140 HLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLA---RDIYKDPDY 195
Query: 231 VQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
V+ D+ LPL+ + APE + + + SD++SFG + + + +
Sbjct: 196 VRK--------GDARLPLK----WMAPETIFDRVYTI--QSDVWSFGVLLWEIFS 236
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 19/109 (17%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + +E+L R IHR ++ NIL+ + K+G FG Q + V+
Sbjct: 128 QICKGMEYL-GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD-KEXXKVKE---- 181
Query: 238 EYDVEDSMLPLQPSLNYTAPE-LVRSKTNSFGCSSDIFSFGCVAYHLIA 285
P + + + APE L SK F +SD++SFG V Y L
Sbjct: 182 ---------PGESPIFWYAPESLTESK---FSVASDVWSFGVVLYELFT 218
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ G A TD
Sbjct: 131 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDRGLARHTD------------- 176
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 177 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 296 V 296
+
Sbjct: 229 I 229
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 22/121 (18%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ QI L+++HS A +IHR + P N+ + + K+ G A TD
Sbjct: 131 IYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDGGLARHTD------------- 176
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
D M + Y APE++ + + + + DI+S GC+ L+ + LF ++
Sbjct: 177 -------DEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Query: 296 V 296
+
Sbjct: 229 I 229
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 86/209 (41%), Gaps = 43/209 (20%)
Query: 114 RLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRE------------ 161
RL+ PG A+ K F S A+++G FE+ + + E
Sbjct: 34 RLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMIL 93
Query: 162 --------------LKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSN 207
L + +++++ L IA + +L + +HR ++ NIL+ SN
Sbjct: 94 TEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL-AEMSYVHRDLAARNILVNSN 152
Query: 208 GAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSF 267
K+ FG + ++ SD + + +P++ +TAPE + + F
Sbjct: 153 LVCKVSDFGLSRFLEENSSDPTYTSSL--------GGKIPIR----WTAPEAIAFR--KF 198
Query: 268 GCSSDIFSFGCVAYHLI--ARKPLFDCNN 294
+SD +S+G V + ++ +P +D +N
Sbjct: 199 TSASDAWSYGIVMWEVMSFGERPYWDMSN 227
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 20/110 (18%)
Query: 181 ESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYD 240
+ LE+LH R IHR I NIL+ + G KL FG A ++ + V +
Sbjct: 136 KGLEYLHF-MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPF---- 190
Query: 241 VEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
+ APE+++ + C +DI+S G A + KP +
Sbjct: 191 -------------WMAPEVIQEI--GYNCVADIWSLGITAIEMAEGKPPY 225
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 19/109 (17%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + +E+L R IHR ++ NIL+ + K+G FG Q + V+
Sbjct: 125 QICKGMEYL-GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD-KEXXKVKE---- 178
Query: 238 EYDVEDSMLPLQPSLNYTAPE-LVRSKTNSFGCSSDIFSFGCVAYHLIA 285
P + + + APE L SK F +SD++SFG V Y L
Sbjct: 179 ---------PGESPIFWYAPESLTESK---FSVASDVWSFGVVLYELFT 215
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 19/109 (17%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + +E+L R IHR ++ NIL+ + K+G FG Q + V+
Sbjct: 125 QICKGMEYL-GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD-KEXXKVKE---- 178
Query: 238 EYDVEDSMLPLQPSLNYTAPE-LVRSKTNSFGCSSDIFSFGCVAYHLIA 285
P + + + APE L SK F +SD++SFG V Y L
Sbjct: 179 ---------PGESPIFWYAPESLTESK---FSVASDVWSFGVVLYELFT 215
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 19/109 (17%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + +E+L R IHR ++ NIL+ + K+G FG Q + V+
Sbjct: 140 QICKGMEYL-GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD-KEXXKVKE---- 193
Query: 238 EYDVEDSMLPLQPSLNYTAPE-LVRSKTNSFGCSSDIFSFGCVAYHLIA 285
P + + + APE L SK F +SD++SFG V Y L
Sbjct: 194 ---------PGESPIFWYAPESLTESK---FSVASDVWSFGVVLYELFT 230
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 56/191 (29%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+A +E+L S + IHR ++ N+L+T + K+ FG A + H+
Sbjct: 158 QVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLA-------------RDIHHI 203
Query: 238 EY--DVEDSMLPLQPSLNYTAPELV-------RSKTNSFGC-SSDIFSFGCVAYHLIARK 287
+Y + LP++ + APE + +S SFG +IF+ G Y + +
Sbjct: 204 DYYKKTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 259
Query: 288 PLF-------------DCNNNVKMYMNTLTYLSSDAFSSIPS------DLVPDLQKM--L 326
LF +C N + M M D + ++PS LV DL ++ L
Sbjct: 260 ELFKLLKEGHRMDKPSNCTNELYMMMR-------DCWHAVPSQRPTFKQLVEDLDRIVAL 312
Query: 327 SANESFRPTAM 337
++N+ + +M
Sbjct: 313 TSNQEYLDLSM 323
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 13/111 (11%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS----DSSNVQA 233
QI E+L ++HS +IHR + P NI I + K+G FG A + +++ DS N+
Sbjct: 124 QILEALSYIHSQG-IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 234 FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
D++ + Y A E++ T + D +S G + + I
Sbjct: 183 -------SSDNLTSAIGTAXYVATEVL-DGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 19/109 (17%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + +E+L R IHR ++ NIL+ + K+G FG Q + V+
Sbjct: 122 QICKGMEYL-GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD-KEXXKVKE---- 175
Query: 238 EYDVEDSMLPLQPSLNYTAPE-LVRSKTNSFGCSSDIFSFGCVAYHLIA 285
P + + + APE L SK F +SD++SFG V Y L
Sbjct: 176 ---------PGESPIFWYAPESLTESK---FSVASDVWSFGVVLYELFT 212
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 73/180 (40%), Gaps = 32/180 (17%)
Query: 115 LRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKH 174
L HP IV + + + E + + +V E +AS V + M E +
Sbjct: 63 LNHPNIVKLFEVI-ETEKTLYLVME--YASGGEVFDYL---------VAHGWMKEKEARA 110
Query: 175 GLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAF 234
QI ++++ H ++HR + EN+L+ ++ K+ FGF+
Sbjct: 111 KFRQIVSAVQYCHQKF-IVHRDLKAENLLLDADMNIKIADFGFS---------------- 153
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNN 294
E+ + + S Y APEL + K G D++S G + Y L++ FD N
Sbjct: 154 --NEFTFGNKLDTFCGSPPYAAPELFQGKKYD-GPEVDVWSLGVILYTLVSGSLPFDGQN 210
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 19/109 (17%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + +E+L R IHR ++ NIL+ + K+G FG Q + V+
Sbjct: 140 QICKGMEYL-GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD-KEXXKVKE---- 193
Query: 238 EYDVEDSMLPLQPSLNYTAPE-LVRSKTNSFGCSSDIFSFGCVAYHLIA 285
P + + + APE L SK F +SD++SFG V Y L
Sbjct: 194 ---------PGESPIFWYAPESLTESK---FSVASDVWSFGVVLYELFT 230
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 19/109 (17%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + +E+L R IHR ++ NIL+ + K+G FG Q + V+
Sbjct: 153 QICKGMEYL-GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD-KEXXKVKE---- 206
Query: 238 EYDVEDSMLPLQPSLNYTAPE-LVRSKTNSFGCSSDIFSFGCVAYHLIA 285
P + + + APE L SK F +SD++SFG V Y L
Sbjct: 207 ---------PGESPIFWYAPESLTESK---FSVASDVWSFGVVLYELFT 243
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 19/109 (17%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + +E+L R IHR ++ NIL+ + K+G FG Q + V+
Sbjct: 127 QICKGMEYL-GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD-KEXXKVKE---- 180
Query: 238 EYDVEDSMLPLQPSLNYTAPE-LVRSKTNSFGCSSDIFSFGCVAYHLIA 285
P + + + APE L SK F +SD++SFG V Y L
Sbjct: 181 ---------PGESPIFWYAPESLTESK---FSVASDVWSFGVVLYELFT 217
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 27/111 (24%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QIAE + ++ IHR + N+L++ + K+ FG A + I D+
Sbjct: 118 QIAEGMAYIERK-NYIHRDLRAANVLVSESLMCKIADFGLA----RVIEDN--------- 163
Query: 238 EYDV-EDSMLPLQPSLNYTAPELVRSKTNSFGC---SSDIFSFGCVAYHLI 284
EY E + P++ +TAPE + +FGC SD++SFG + Y ++
Sbjct: 164 EYTAREGAKFPIK----WTAPEAI-----NFGCFTIKSDVWSFGILLYEIV 205
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 31/187 (16%)
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
+L EM +IA+ + +L++ + +HR ++ N ++ + K+G FG ++ D +D
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFG--MTRDIXETD 184
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL--IA 285
+LP++ + APE + K F SSD++SFG V + + +A
Sbjct: 185 XXRKGG---------KGLLPVR----WMAPESL--KDGVFTTSSDMWSFGVVLWEITSLA 229
Query: 286 RKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDL---VPDLQKML-SANESFRPTAMDFTG 341
+P +N L ++ + P + V DL +M N + RPT ++
Sbjct: 230 EQPYQGLSNE-----QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIV- 283
Query: 342 SRFFRDD 348
+DD
Sbjct: 284 -NLLKDD 289
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 19/109 (17%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + +E+L R IHR ++ NIL+ + K+G FG Q + V+
Sbjct: 129 QICKGMEYL-GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD-KEXXKVKE---- 182
Query: 238 EYDVEDSMLPLQPSLNYTAPE-LVRSKTNSFGCSSDIFSFGCVAYHLIA 285
P + + + APE L SK F +SD++SFG V Y L
Sbjct: 183 ---------PGESPIFWYAPESLTESK---FSVASDVWSFGVVLYELFT 219
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 19/109 (17%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + +E+L R IHR ++ NIL+ + K+G FG Q + V+
Sbjct: 125 QICKGMEYL-GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD-KEXXKVKE---- 178
Query: 238 EYDVEDSMLPLQPSLNYTAPE-LVRSKTNSFGCSSDIFSFGCVAYHLIA 285
P + + + APE L SK F +SD++SFG V Y L
Sbjct: 179 ---------PGESPIFWYAPESLTESK---FSVASDVWSFGVVLYELFT 215
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 80/173 (46%), Gaps = 22/173 (12%)
Query: 117 HPGIVHVVQAMDENKNAMAMVTEPL-FASVANVLGNFENV---SKVPRELKGLEMSLLEM 172
H +V+++ A + + ++ E F +++ L + N K P +L ++L +
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 173 KHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQ 232
Q+A+ +EFL S + IHR ++ NIL++ K+ FG A + D V+
Sbjct: 151 ICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIXK---DPDXVR 206
Query: 233 AFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
D+ LPL+ + APE + + + SD++SFG + + + +
Sbjct: 207 K--------GDARLPLK----WMAPETIFDRVYTI--QSDVWSFGVLLWEIFS 245
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 23/172 (13%)
Query: 117 HPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKHGL 176
H +V+++ A + + ++ E F N+ + K L L ++H +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVE--FCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLI 147
Query: 177 ---LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQA 233
Q+A+ +EFL S + IHR ++ NIL++ K+ FG A D V+
Sbjct: 148 XYSFQVAKGMEFLASR-KXIHRDLAARNILLSEKNVVKIXDFGLA---RDIYKDPDYVRK 203
Query: 234 FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
D+ LPL+ + APE + + + SD++SFG + + + +
Sbjct: 204 --------GDARLPLK----WMAPETIFDRV--YTIQSDVWSFGVLLWEIFS 241
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 93/247 (37%), Gaps = 53/247 (21%)
Query: 45 IGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLTKSAEDAFLDL 104
IG G G K+Y A+ ++ + VL A A+ TKS E+ +
Sbjct: 42 IGELGDGAFGKVYKAQNKETS------------VL-------AAAKVIDTKSEEELEDYM 82
Query: 105 VRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKG 164
V D L HP IV ++ A N ++ +V V+ E R L
Sbjct: 83 VEIDI--LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE------RPLTE 134
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
++ ++ Q ++L +LH N ++IHR + NIL T +G KL FG + +
Sbjct: 135 SQIQVV-----CKQTLDALNYLHDN-KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRX 188
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELV---RSKTNSFGCSSDIFSFGCVAY 281
I Y + APE+V SK + +D++S G
Sbjct: 189 IQRRDXFIGTPY-----------------WMAPEVVMCETSKDRPYDYKADVWSLGITLI 231
Query: 282 HLIARKP 288
+ +P
Sbjct: 232 EMAEIEP 238
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 19/103 (18%)
Query: 179 IAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAE 238
+ S ++H+ + HR + P NIL+ NG KL FG +E
Sbjct: 160 VLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFG-------------------ESE 200
Query: 239 YDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAY 281
Y V+ + + + + PE ++++ G DI+S G Y
Sbjct: 201 YMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLY 243
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 82/187 (43%), Gaps = 31/187 (16%)
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
+L EM +IA+ + +L++ + +HR ++ N ++ + K+G FG ++ D +D
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFG--MTRDIXETD 184
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL--IA 285
+LP++ + APE + K F SSD++SFG V + + +A
Sbjct: 185 XXRKGG---------KGLLPVR----WMAPESL--KDGVFTTSSDMWSFGVVLWEITSLA 229
Query: 286 RKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDL---VPDLQKML-SANESFRPTAMDFTG 341
+P +N L ++ + P + V DL +M N RPT ++
Sbjct: 230 EQPYQGLSNE-----QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV- 283
Query: 342 SRFFRDD 348
+DD
Sbjct: 284 -NLLKDD 289
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 20/132 (15%)
Query: 166 EMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAI 225
E++ +M H QIA + +L S +HR ++ N L+ N K+G FG +S D
Sbjct: 124 ELTQSQMLHIAQQIAAGMVYLASQ-HFVHRDLATRNCLVGENLLVKIGDFG--MSRDVYS 180
Query: 226 SDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI- 284
+D V +MLP++ + PE + + F SD++S G V + +
Sbjct: 181 TDYYRVGG---------HTMLPIR----WMPPESIMYR--KFTTESDVWSLGVVLWEIFT 225
Query: 285 -ARKPLFDCNNN 295
++P + +NN
Sbjct: 226 YGKQPWYQLSNN 237
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 20/114 (17%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
L + ++L LH+ +IHR I ++IL+T +G KL FGF + + + Y
Sbjct: 254 LAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY 312
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
+ APEL+ +G DI+S G + ++ +P +
Sbjct: 313 -----------------WMAPELI--SRLPYGPEVDIWSLGIMVIEMVDGEPPY 347
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 23/172 (13%)
Query: 117 HPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKHGL 176
H +V+++ A + + ++ E F N+ + K L L ++H +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVE--FCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLI 147
Query: 177 ---LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQA 233
Q+A+ +EFL S + IHR ++ NIL++ K+ FG A D V+
Sbjct: 148 CYSFQVAKGMEFLASR-KXIHRDLAARNILLSEKNVVKICDFGLA---RDIYKDPDYVRK 203
Query: 234 FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
D+ LPL+ + APE + + + SD++SFG + + + +
Sbjct: 204 --------GDARLPLK----WMAPETIFDRV--YTIQSDVWSFGVLLWEIFS 241
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 82/187 (43%), Gaps = 31/187 (16%)
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
+L EM +IA+ + +L++ + +HR ++ N ++ + K+G FG ++ D +D
Sbjct: 125 TLQEMIQMAAEIADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFG--MTRDIXETD 181
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL--IA 285
+LP++ + APE + K F SSD++SFG V + + +A
Sbjct: 182 XXRKGG---------KGLLPVR----WMAPESL--KDGVFTTSSDMWSFGVVLWEITSLA 226
Query: 286 RKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDL---VPDLQKML-SANESFRPTAMDFTG 341
+P +N L ++ + P + V DL +M N RPT ++
Sbjct: 227 EQPYQGLSNE-----QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV- 280
Query: 342 SRFFRDD 348
+DD
Sbjct: 281 -NLLKDD 286
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 98/227 (43%), Gaps = 28/227 (12%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
+IA L FL S +I+R + +N+++ S G K+ FG + I D + F
Sbjct: 129 EIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMC---KENIWDGVTTKXF--- 181
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
+ +Y APE++ + +G S D ++FG + Y ++A + F+ + +
Sbjct: 182 -----------CGTPDYIAPEIIAYQ--PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 228
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFFRDDTRLRALRFL 357
++ + + + + S+ + V + +++ + R G RD R++
Sbjct: 229 LFQSIMEHNVAYP-KSMSKEAVAICKGLMTKHPGKRLGC----GPEGERDIKEHAFFRYI 283
Query: 358 D-HMLERDNMQKSEFLKALSDMWKDFDSRVLRYK--VLPPLCEELRN 401
D LER +Q KA ++FD R+ + PP E +RN
Sbjct: 284 DWEKLERKEIQPPYKPKACGRNAENFDRFFTRHPPVLXPPDQEVIRN 330
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 85/202 (42%), Gaps = 35/202 (17%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L RL H HVV+ +D + L+ + +F+ + + P L L + L
Sbjct: 106 LNRLNHD---HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTL- 161
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
L + ++++HS A ++HR + P N L+ + + K+ FG A + D + +S +
Sbjct: 162 ----LYNLLVGVKYVHS-AGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQL 216
Query: 232 QAFHYAEYDVEDSMLPLQPSLN-----------YTAPELVRSKTNSFGCSSDIFSFGC-- 278
E D+ P +L Y APEL+ + N + + D++S GC
Sbjct: 217 -PISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQEN-YTEAIDVWSIGCIF 274
Query: 279 ----------VAYHLIARKPLF 290
VAYH R PLF
Sbjct: 275 AELLNMIKENVAYH-ADRGPLF 295
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 52/200 (26%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ Q+ + L ++H+ A +IHR + P N+ + + K+ FG A D + +
Sbjct: 134 VYQMLKGLRYIHA-AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRW-- 190
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNN 295
Y APE++ + + + DI+S GC+ +I K LF +++
Sbjct: 191 ------------------YRAPEVILNWMR-YTQTVDIWSVGCIMAEMITGKTLFKGSDH 231
Query: 296 V--------------------------KMYMNTLTYLSSDAFSSIPSDLVP----DLQKM 325
+ K YM L L F+SI ++ P L+KM
Sbjct: 232 LDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKM 291
Query: 326 LSANESFRPTAMDFTGSRFF 345
L + R TA + +F
Sbjct: 292 LVLDAEQRVTAGEALAHPYF 311
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 17/107 (15%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
+I +LE LH +I+R I ENIL+ SNG L FG + + ++D + +A+ +
Sbjct: 167 EIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGL---SKEFVADETE-RAYDFC 221
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
++ Y AP++VR + + D +S G + Y L+
Sbjct: 222 ------------GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELL 256
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 20/114 (17%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
L + ++L LH+ +IHR I ++IL+T +G KL FGF + + + Y
Sbjct: 132 LAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY 190
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
+ APEL+ +G DI+S G + ++ +P +
Sbjct: 191 -----------------WMAPELI--SRLPYGPEVDIWSLGIMVIEMVDGEPPY 225
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 33/186 (17%)
Query: 107 ADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLE 166
++A + L HP IV ++ ++E + M P LG++ +K LK L
Sbjct: 58 SEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPY-----GELGHYLERNK--NSLKVLT 110
Query: 167 MSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS 226
+ L LQI +++ +L S +HR I+ NIL+ S KLG FG + + I
Sbjct: 111 LVLYS-----LQICKAMAYLES-INCVHRDIAVRNILVASPECVKLGDFGLS----RYIE 160
Query: 227 DSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA- 285
D Y + LP++ + +PE + + F +SD++ F + +++
Sbjct: 161 DED--------YYKASVTRLPIK----WMSPESINFR--RFTTASDVWMFAVCMWEILSF 206
Query: 286 -RKPLF 290
++P F
Sbjct: 207 GKQPFF 212
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 33/186 (17%)
Query: 107 ADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLE 166
++A + L HP IV ++ ++E + M P LG++ +K LK L
Sbjct: 62 SEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPY-----GELGHYLERNK--NSLKVLT 114
Query: 167 MSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS 226
+ L LQI +++ +L S +HR I+ NIL+ S KLG FG + + I
Sbjct: 115 LVLYS-----LQICKAMAYLES-INCVHRDIAVRNILVASPECVKLGDFGLS----RYIE 164
Query: 227 DSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA- 285
D Y + LP++ + +PE + + F +SD++ F + +++
Sbjct: 165 DED--------YYKASVTRLPIK----WMSPESINFR--RFTTASDVWMFAVCMWEILSF 210
Query: 286 -RKPLF 290
++P F
Sbjct: 211 GKQPFF 216
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 20/114 (17%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
L + ++L LH+ +IHR I ++IL+T +G KL FGF + + + Y
Sbjct: 177 LAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY 235
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
+ APEL+ +G DI+S G + ++ +P +
Sbjct: 236 -----------------WMAPELI--SRLPYGPEVDIWSLGIMVIEMVDGEPPY 270
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 94/227 (41%), Gaps = 28/227 (12%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
+IA L FL S +I+R + +N+++ S G K+ FG + I D + F
Sbjct: 450 EIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMC---KENIWDGVTTKXF--- 502
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
+ +Y APE++ + +G S D ++FG + Y ++A + F+ + +
Sbjct: 503 -----------CGTPDYIAPEIIAYQ--PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 549
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFFRDDTRLRALRFL 357
++ + + + + P + + + + P G RD R++
Sbjct: 550 LFQSIMEHN-----VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 604
Query: 358 D-HMLERDNMQKSEFLKALSDMWKDFDSRVLRYK--VLPPLCEELRN 401
D LER +Q KA ++FD R+ + PP E +RN
Sbjct: 605 DWEKLERKEIQPPYKPKASGRNAENFDRFFTRHPPVLXPPDQEVIRN 651
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 20/114 (17%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
L + ++L LH+ +IHR I ++IL+T +G KL FGF + + + Y
Sbjct: 134 LAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY 192
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
+ APEL+ +G DI+S G + ++ +P +
Sbjct: 193 -----------------WMAPELI--SRLPYGPEVDIWSLGIMVIEMVDGEPPY 227
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 75/183 (40%), Gaps = 35/183 (19%)
Query: 112 LVRLRHPGIVHV----VQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEM 167
L HP I+ + V + + + +VTE + +A V+ + + + P+ ++
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD-QRIVISPQHIQYF-- 139
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
M H LL L LH A ++HR + P NIL+ N + F A D
Sbjct: 140 ----MYHILL----GLHVLHE-AGVVHRDLHPGNILLADNNDITICDFNL------ARED 184
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARK 287
+++ HY + Y APELV + F D++S GCV + RK
Sbjct: 185 TADANKTHYVTHRW------------YRAPELV-MQFKGFTKLVDMWSAGCVMAEMFNRK 231
Query: 288 PLF 290
LF
Sbjct: 232 ALF 234
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 78/174 (44%), Gaps = 23/174 (13%)
Query: 117 HPGIVHVVQAMDENKNAMAMVTEPL-FASVANVL----GNFENVSKVPRELKGLEMSLLE 171
H +V+++ A + + ++ E F +++ L F + P +L ++L
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEH 151
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
+ Q+A+ +EFL S + IHR ++ NIL++ K+ FG A D V
Sbjct: 152 LICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLA---RDIYKDPDYV 207
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
+ D+ LPL+ + APE + + + SD++SFG + + + +
Sbjct: 208 RK--------GDARLPLK----WMAPETIFDRVYTI--QSDVWSFGVLLWEIFS 247
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 21/109 (19%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFA--ISTDQAISDSSNVQAFH 235
QI + +E+L S R +HR ++ NIL+ S K+ FG A + D+ D V+
Sbjct: 119 QICKGMEYLGSR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK---DXXVVRE-- 172
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
P Q + + APE + N F SD++SFG V Y L
Sbjct: 173 -----------PGQSPIFWYAPESL--SDNIFSRQSDVWSFGVVLYELF 208
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 31/187 (16%)
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
+L EM +IA+ + +L++ + +HR ++ N ++ + K+G FG ++ D +D
Sbjct: 129 TLQEMIQMAAEIADGMAYLNAK-KFVHRNLAARNCMVAHDFTVKIGDFG--MTRDIYETD 185
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL--IA 285
+LP++ + APE + K F SSD++SFG V + + +A
Sbjct: 186 YYRKGG---------KGLLPVR----WMAPESL--KDGVFTTSSDMWSFGVVLWEITSLA 230
Query: 286 RKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDL---VPDLQKML-SANESFRPTAMDFTG 341
+P +N L ++ + P + V DL +M N + RPT ++
Sbjct: 231 EQPYQGLSNE-----QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIV- 284
Query: 342 SRFFRDD 348
+DD
Sbjct: 285 -NLLKDD 290
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 31/187 (16%)
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
+L EM +IA+ + +L++ + +HR ++ N ++ + K+G FG ++ D +D
Sbjct: 127 TLQEMIQMAAEIADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFG--MTRDIYETD 183
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL--IA 285
+Y + +LP++ + APE + K F SSD++SFG V + + +A
Sbjct: 184 -------YYRKGG--KGLLPVR----WMAPESL--KDGVFTTSSDMWSFGVVLWEITSLA 228
Query: 286 RKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDL---VPDLQKML-SANESFRPTAMDFTG 341
+P +N L ++ + P + V DL +M N RPT ++
Sbjct: 229 EQPYQGLSNE-----QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV- 282
Query: 342 SRFFRDD 348
+DD
Sbjct: 283 -NLLKDD 288
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 31/187 (16%)
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
+L EM +IA+ + +L++ + +HR ++ N ++ + K+G FG ++ D +D
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAK-KFVHRNLAARNCMVAHDFTVKIGDFG--MTRDIYETD 184
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL--IA 285
+LP++ + APE + K F SSD++SFG V + + +A
Sbjct: 185 YYRKGG---------KGLLPVR----WMAPESL--KDGVFTTSSDMWSFGVVLWEITSLA 229
Query: 286 RKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDL---VPDLQKML-SANESFRPTAMDFTG 341
+P +N L ++ + P + V DL +M N + RPT ++
Sbjct: 230 EQPYQGLSNE-----QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIV- 283
Query: 342 SRFFRDD 348
+DD
Sbjct: 284 -NLLKDD 289
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 83/175 (47%), Gaps = 25/175 (14%)
Query: 117 HPGIVHVVQAMDENKNAMAMVTEPL-FASVANVLGNFENVSKVPREL--KGLEMSLLEMK 173
H +V+++ A + + ++ E F +++ L + N VP ++ + L L ++
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-EFVPYKVAPEDLYKDFLTLE 148
Query: 174 HGL---LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSN 230
H + Q+A+ +EFL S + IHR ++ NIL++ K+ FG A + D
Sbjct: 149 HLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIXK---DPDX 204
Query: 231 VQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
V+ D+ LPL+ + APE + + + SD++SFG + + + +
Sbjct: 205 VRK--------GDARLPLK----WMAPETIFDRVYTI--QSDVWSFGVLLWEIFS 245
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 66/180 (36%), Gaps = 32/180 (17%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI LE LH +I+R + PEN+L+ +G ++ G A+ + +
Sbjct: 297 QIVSGLEHLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG---- 351
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDC----- 292
+ + APEL+ + F S D F+ G Y +IA + F
Sbjct: 352 -------------TPGFMAPELLLGEEYDF--SVDYFALGVTLYEMIAARGPFRARGEKV 396
Query: 293 -NNNVKMYMNTLTYLSSDAFSSIPSDLVPD-LQKMLSANESFRPTAMDFTGSR---FFRD 347
N +K + D FS D LQK FR + D G R FRD
Sbjct: 397 ENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCD--GLRTHPLFRD 454
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 20/110 (18%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
Q+A +EFL S+ + IHR ++ NIL++ N K+ FG A +
Sbjct: 206 FQVARGMEFL-SSRKCIHRDLAARNILLSENNVVKICDFGLARDI------------YKN 252
Query: 237 AEYDVE-DSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
+Y + D+ LPL+ + APE + K + SD++S+G + + + +
Sbjct: 253 PDYVRKGDTRLPLK----WMAPESIFDKI--YSTKSDVWSYGVLLWEIFS 296
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 92/225 (40%), Gaps = 37/225 (16%)
Query: 63 DVTRQQ----AQYPMVCVWVLDKRALSEARARAGLTKSAEDAFLDLVRADAGKLVRLRHP 118
D+T + QY V V V K +L+ A + FL +A + ++HP
Sbjct: 33 DITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLK----EAAVMKEIKHP 88
Query: 119 GIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQ 178
+V ++ EP F V + + N+ RE E++ + + + Q
Sbjct: 89 NLVQLLGVC---------TLEPPFYIVTEYM-PYGNLLDYLRECNREEVTAVVLLYMATQ 138
Query: 179 IAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAE 238
I+ ++E+L IHR ++ N L+ N K+ FG + D+ A
Sbjct: 139 ISSAMEYLEKK-NFIHRDLAARNCLVGENHVVKVADFGL---SRLMTGDTYTAHA----- 189
Query: 239 YDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
+ P++ +TAPE + N+F SD+++FG + + +
Sbjct: 190 ----GAKFPIK----WTAPESL--AYNTFSIKSDVWAFGVLLWEI 224
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QIAE + F+ IHR + NIL++++ K+ FG A + I D+
Sbjct: 119 QIAEGMAFIEQR-NYIHRDLRAANILVSASLVCKIADFGLA----RVIEDN--------- 164
Query: 238 EYDV-EDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
EY E + P++ +TAPE + SF SD++SFG + ++
Sbjct: 165 EYTAREGAKFPIK----WTAPEAI--NFGSFTIKSDVWSFGILLMEIV 206
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 66/180 (36%), Gaps = 32/180 (17%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI LE LH +I+R + PEN+L+ +G ++ G A+ + +
Sbjct: 297 QIVSGLEHLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG---- 351
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDC----- 292
+ + APEL+ + F S D F+ G Y +IA + F
Sbjct: 352 -------------TPGFMAPELLLGEEYDF--SVDYFALGVTLYEMIAARGPFRARGEKV 396
Query: 293 -NNNVKMYMNTLTYLSSDAFSSIPSDLVPD-LQKMLSANESFRPTAMDFTGSR---FFRD 347
N +K + D FS D LQK FR + D G R FRD
Sbjct: 397 ENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCD--GLRTHPLFRD 454
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 82/175 (46%), Gaps = 25/175 (14%)
Query: 117 HPGIVHVVQAMDENKNAMAMVTEPL-FASVANVLGNFENVSKVPREL--KGLEMSLLEMK 173
H +V+++ A + + ++ E F +++ L + N VP ++ + L L ++
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-EFVPYKVAPEDLYKDFLTLE 148
Query: 174 HGL---LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSN 230
H + Q+A+ +EFL S + IHR ++ NIL++ K+ FG A D
Sbjct: 149 HLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLA---RDIYKDPDX 204
Query: 231 VQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
V+ D+ LPL+ + APE + + + SD++SFG + + + +
Sbjct: 205 VRK--------GDARLPLK----WMAPETIFDRVYTI--QSDVWSFGVLLWEIFS 245
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 20/114 (17%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
L + ++L LH+ +IHR I ++IL+T +G KL FGF + + + Y
Sbjct: 123 LAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY 181
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
+ APEL+ +G DI+S G + ++ +P +
Sbjct: 182 -----------------WMAPELISRL--PYGPEVDIWSLGIMVIEMVDGEPPY 216
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 74/176 (42%), Gaps = 29/176 (16%)
Query: 108 DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEM 167
+A + ++HP +V ++ EP F + + + N+ RE E+
Sbjct: 57 EAAVMKEIKHPNLVQLLGVC---------TREPPFYIITEFM-TYGNLLDYLRECNRQEV 106
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
S + + + QI+ ++E+L IHR ++ N L+ N K+ FG + D
Sbjct: 107 SAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGL---SRLMTGD 162
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
+ A + P++ +TAPE + N F SD+++FG + + +
Sbjct: 163 TXTAHA---------GAKFPIK----WTAPESL--AYNKFSIKSDVWAFGVLLWEI 203
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 66/180 (36%), Gaps = 32/180 (17%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI LE LH +I+R + PEN+L+ +G ++ G A+ + +
Sbjct: 297 QIVSGLEHLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG---- 351
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDC----- 292
+ + APEL+ + F S D F+ G Y +IA + F
Sbjct: 352 -------------TPGFMAPELLLGEEYDF--SVDYFALGVTLYEMIAARGPFRARGEKV 396
Query: 293 -NNNVKMYMNTLTYLSSDAFSSIPSDLVPD-LQKMLSANESFRPTAMDFTGSR---FFRD 347
N +K + D FS D LQK FR + D G R FRD
Sbjct: 397 ENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCD--GLRTHPLFRD 454
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 66/180 (36%), Gaps = 32/180 (17%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI LE LH +I+R + PEN+L+ +G ++ G A+ + +
Sbjct: 297 QIVSGLEHLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG---- 351
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDC----- 292
+ + APEL+ + F S D F+ G Y +IA + F
Sbjct: 352 -------------TPGFMAPELLLGEEYDF--SVDYFALGVTLYEMIAARGPFRARGEKV 396
Query: 293 -NNNVKMYMNTLTYLSSDAFSSIPSDLVPD-LQKMLSANESFRPTAMDFTGSR---FFRD 347
N +K + D FS D LQK FR + D G R FRD
Sbjct: 397 ENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCD--GLRTHPLFRD 454
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 75/183 (40%), Gaps = 35/183 (19%)
Query: 112 LVRLRHPGIVHV----VQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEM 167
L HP I+ + V + + + +VTE + +A V+ + + + P+ ++
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD-QRIVISPQHIQYF-- 139
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
M H LL L LH A ++HR + P NIL+ N + F A D
Sbjct: 140 ----MYHILL----GLHVLHE-AGVVHRDLHPGNILLADNNDITICDFNL------ARED 184
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARK 287
+++ HY + Y APELV + F D++S GCV + RK
Sbjct: 185 TADANKTHYVTHRW------------YRAPELV-MQFKGFTKLVDMWSAGCVMAEMFNRK 231
Query: 288 PLF 290
LF
Sbjct: 232 ALF 234
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 74/176 (42%), Gaps = 29/176 (16%)
Query: 108 DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEM 167
+A + ++HP +V ++ EP F + + + N+ RE E+
Sbjct: 64 EAAVMKEIKHPNLVQLLGVC---------TREPPFYIITEFM-TYGNLLDYLRECNRQEV 113
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
S + + + QI+ ++E+L IHR ++ N L+ N K+ FG + D
Sbjct: 114 SAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGL---SRLMTGD 169
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
+ A + P++ +TAPE + N F SD+++FG + + +
Sbjct: 170 TYTAHA---------GAKFPIK----WTAPESL--AYNKFSIKSDVWAFGVLLWEI 210
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 54/179 (30%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+A +E+L S + IHR ++ N+L+T + K+ FG A + H+
Sbjct: 151 QVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLA-------------RDIHHI 196
Query: 238 EY--DVEDSMLPLQPSLNYTAPELV-------RSKTNSFGC-SSDIFSFGCVAYHLIARK 287
+Y + LP++ + APE + +S SFG +IF+ G Y + +
Sbjct: 197 DYYKKTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 252
Query: 288 PLF-------------DCNNNVKMYMNTLTYLSSDAFSSIPS------DLVPDLQKMLS 327
LF +C N + M M D + ++PS LV DL ++++
Sbjct: 253 ELFKLLKEGHRMDKPSNCTNELYMMMR-------DCWHAVPSQRPTFKQLVEDLDRIVA 304
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 82/187 (43%), Gaps = 31/187 (16%)
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
+L EM +IA+ + +L++ + +HR ++ N ++ + K+G FG ++ D +D
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFG--MTRDIYETD 184
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL--IA 285
+LP++ + APE + K F SSD++SFG V + + +A
Sbjct: 185 YYRKGG---------KGLLPVR----WMAPESL--KDGVFTTSSDMWSFGVVLWEITSLA 229
Query: 286 RKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDL---VPDLQKML-SANESFRPTAMDFTG 341
+P +N L ++ + P + V DL +M N RPT ++
Sbjct: 230 EQPYQGLSNE-----QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV- 283
Query: 342 SRFFRDD 348
+DD
Sbjct: 284 -NLLKDD 289
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 83/175 (47%), Gaps = 25/175 (14%)
Query: 117 HPGIVHVVQAMDENKNAMAMVTEPL-FASVANVLGNFENVSKVPREL--KGLEMSLLEMK 173
H +V+++ A + + ++ E F +++ L + N VP ++ + L L ++
Sbjct: 81 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-EFVPYKVAPEDLYKDFLTLE 139
Query: 174 HGL---LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSN 230
H + Q+A+ +EFL S + IHR ++ NIL++ K+ FG A + D
Sbjct: 140 HLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIXK---DPDX 195
Query: 231 VQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
V+ D+ LPL+ + APE + + + SD++SFG + + + +
Sbjct: 196 VRK--------GDARLPLK----WMAPETIFDRVYTI--QSDVWSFGVLLWEIFS 236
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 85/200 (42%), Gaps = 40/200 (20%)
Query: 118 PGIVHVVQAMDENKNAMAMVTEPL-FASVANVLGNFENVSKVPRELKGLEMSLLEMKHGL 176
P +V + A ++K + MV E + + N++ N++ VP + K
Sbjct: 135 PWVVQLFCAFQDDK-YLYMVMEYMPGGDLVNLMSNYD----VPEKWA---------KFYT 180
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
++ +L+ +HS LIHR + P+N+L+ +G KL FG + D
Sbjct: 181 AEVVLALDAIHSMG-LIHRDVKPDNMLLDKHGHLKLADFGTCMKMD-------------- 225
Query: 237 AEYDVEDSMLPLQPSL---NYTAPELVRSKTNS--FGCSSDIFSFGCVAYHLIARKPLFD 291
E M+ ++ +Y +PE+++S+ +G D +S G + ++ F
Sbjct: 226 -----ETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFY 280
Query: 292 CNNNVKMYMNTLTYLSSDAF 311
++ V Y + + +S F
Sbjct: 281 ADSLVGTYSKIMDHKNSLCF 300
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 17/107 (15%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + +E+L S R +HR ++ NIL+ S K+ FG A +
Sbjct: 122 QICKGMEYLGSR-RCVHRDLAARNILVESEAHVKIADFGLA-----------KLLPLDKD 169
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
Y V + P Q + + APE + N F SD++SFG V Y L
Sbjct: 170 YYVVRE---PGQSPIFWYAPESL--SDNIFSRQSDVWSFGVVLYELF 211
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 21/109 (19%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFA--ISTDQAISDSSNVQAFH 235
QI + +E+L S R +HR ++ NIL+ S K+ FG A + D+
Sbjct: 135 QICKGMEYLGSR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY---------- 183
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
Y V + P Q + + APE + N F SD++SFG V Y L
Sbjct: 184 ---YVVRE---PGQSPIFWYAPESL--SDNIFSRQSDVWSFGVVLYELF 224
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 54/179 (30%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+A +E+L S + IHR ++ N+L+T + K+ FG A + H+
Sbjct: 158 QVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLA-------------RDIHHI 203
Query: 238 EY--DVEDSMLPLQPSLNYTAPELV-------RSKTNSFGC-SSDIFSFGCVAYHLIARK 287
+Y + LP++ + APE + +S SFG +IF+ G Y + +
Sbjct: 204 DYYKKTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 259
Query: 288 PLF-------------DCNNNVKMYMNTLTYLSSDAFSSIPS------DLVPDLQKMLS 327
LF +C N + M M D + ++PS LV DL ++++
Sbjct: 260 ELFKLLKEGHRMDKPSNCTNELYMMMR-------DCWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 74/176 (42%), Gaps = 29/176 (16%)
Query: 108 DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEM 167
+A + ++HP +V ++ EP F + + + N+ RE E+
Sbjct: 59 EAAVMKEIKHPNLVQLLGVC---------TREPPFYIITEFM-TYGNLLDYLRECNRQEV 108
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
S + + + QI+ ++E+L IHR ++ N L+ N K+ FG + D
Sbjct: 109 SAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGL---SRLMTGD 164
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
+ A + P++ +TAPE + N F SD+++FG + + +
Sbjct: 165 TYTAHA---------GAKFPIK----WTAPESL--AYNKFSIKSDVWAFGVLLWEI 205
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 52/109 (47%), Gaps = 22/109 (20%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+A +E+L S + IHR ++ N+L+T + K+ FG A + H+
Sbjct: 143 QVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLA-------------RDIHHI 188
Query: 238 EY--DVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
+Y + LP++ + APE + + + SD++SFG + + +
Sbjct: 189 DYYKKTTNGRLPVK----WMAPEALFDRI--YTHQSDVWSFGVLLWEIF 231
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 54/179 (30%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+A +E+L S + IHR ++ N+L+T + K+ FG A + H+
Sbjct: 158 QVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLA-------------RDIHHI 203
Query: 238 EY--DVEDSMLPLQPSLNYTAPELV-------RSKTNSFGC-SSDIFSFGCVAYHLIARK 287
+Y + LP++ + APE + +S SFG +IF+ G Y + +
Sbjct: 204 DYYKKTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 259
Query: 288 PLF-------------DCNNNVKMYMNTLTYLSSDAFSSIPS------DLVPDLQKMLS 327
LF +C N + M M D + ++PS LV DL ++++
Sbjct: 260 ELFKLLKEGHRMDKPSNCTNELYMMMR-------DCWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 82/175 (46%), Gaps = 25/175 (14%)
Query: 117 HPGIVHVVQAMDENKNAMAMVTEPL-FASVANVLGNFENVSKVPREL--KGLEMSLLEMK 173
H +V+++ A + + ++ E F +++ L + N VP ++ + L L ++
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-EFVPYKVAPEDLYKDFLTLE 148
Query: 174 HGL---LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSN 230
H + Q+A+ +EFL S + IHR ++ NIL++ K+ FG A D
Sbjct: 149 HLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLA---RDIYKDPDY 204
Query: 231 VQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
V+ D+ LPL+ + APE + + + SD++SFG + + + +
Sbjct: 205 VRK--------GDARLPLK----WMAPETIFDRVYTI--QSDVWSFGVLLWEIFS 245
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 123 VVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAES 182
VVQ +D+ K ++ V V VLG+ + +GL + +K + Q+ +
Sbjct: 87 VVQLLDDFK--ISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPC--VKKIIQQVLQG 142
Query: 183 LEFLHSNARLIHRAISPENILITSN 207
L++LH+ R+IH I PENIL++ N
Sbjct: 143 LDYLHTKCRIIHTDIKPENILLSVN 167
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFA--ISTDQAISDSSNVQA 233
L ++ E LE+LH N + IHR + NIL+ +G+ ++ FG + ++T I+ + +
Sbjct: 122 LREVLEGLEYLHKNGQ-IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT 180
Query: 234 FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
F + + APE V + + +DI+SFG A L
Sbjct: 181 F--------------VGTPCWMAPE-VMEQVRGYDFKADIWSFGITAIEL 215
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFA--ISTDQAISDSSNVQA 233
L ++ E LE+LH N + IHR + NIL+ +G+ ++ FG + ++T I+ + +
Sbjct: 127 LREVLEGLEYLHKNGQ-IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT 185
Query: 234 FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
F + + APE V + + +DI+SFG A L
Sbjct: 186 F--------------VGTPCWMAPE-VMEQVRGYDFKADIWSFGITAIEL 220
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 82/175 (46%), Gaps = 25/175 (14%)
Query: 117 HPGIVHVVQAMDENKNAMAMVTEPL-FASVANVLGNFENVSKVPREL--KGLEMSLLEMK 173
H +V+++ A + + ++ E F +++ L + N VP ++ + L L ++
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-EFVPYKVAPEDLYKDFLTLE 185
Query: 174 HGL---LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSN 230
H + Q+A+ +EFL S + IHR ++ NIL++ K+ FG A D
Sbjct: 186 HLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLA---RDIYKDPDY 241
Query: 231 VQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
V+ D+ LPL+ + APE + + + SD++SFG + + + +
Sbjct: 242 VRK--------GDARLPLK----WMAPETIFDRVYTI--QSDVWSFGVLLWEIFS 282
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 74/176 (42%), Gaps = 29/176 (16%)
Query: 108 DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEM 167
+A + ++HP +V ++ EP F + + + N+ RE E+
Sbjct: 59 EAAVMKEIKHPNLVQLLGVC---------TREPPFYIITEFM-TYGNLLDYLRECNRQEV 108
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
S + + + QI+ ++E+L IHR ++ N L+ N K+ FG + D
Sbjct: 109 SAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGL---SRLMTGD 164
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
+ A + P++ +TAPE + N F SD+++FG + + +
Sbjct: 165 TYTAHA---------GAKFPIK----WTAPESL--AYNKFSIKSDVWAFGVLLWEI 205
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 20/114 (17%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
L + ++L LH+ +IHR I ++IL+T +G KL FGF + + + Y
Sbjct: 127 LAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY 185
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
+ APEL+ +G DI+S G + ++ +P +
Sbjct: 186 -----------------WMAPELI--SRLPYGPEVDIWSLGIMVIEMVDGEPPY 220
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 17/107 (15%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI + +E+L S R +HR ++ NIL+ S K+ FG A +
Sbjct: 123 QICKGMEYLGSR-RCVHRDLAARNILVESEAHVKIADFGLA-----------KLLPLDKD 170
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
Y V + P Q + + APE + N F SD++SFG V Y L
Sbjct: 171 YYVVRE---PGQSPIFWYAPESL--SDNIFSRQSDVWSFGVVLYELF 212
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 18/109 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
Q+A+ +EFL S + IHR ++ NIL++ K+ FG A D V+
Sbjct: 205 FQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDI---YKDPDYVRK--- 257
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
D+ LPL+ + APE + + + SD++SFG + + + +
Sbjct: 258 -----GDARLPLK----WMAPETIFDRV--YTIQSDVWSFGVLLWEIFS 295
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 54/179 (30%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+A +E+L S + IHR ++ N+L+T + K+ FG A + H+
Sbjct: 150 QVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLA-------------RDIHHI 195
Query: 238 EY--DVEDSMLPLQPSLNYTAPELV-------RSKTNSFGC-SSDIFSFGCVAYHLIARK 287
+Y + LP++ + APE + +S SFG +IF+ G Y + +
Sbjct: 196 DYYKKTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 251
Query: 288 PLF-------------DCNNNVKMYMNTLTYLSSDAFSSIPS------DLVPDLQKMLS 327
LF +C N + M M D + ++PS LV DL ++++
Sbjct: 252 ELFKLLKEGHRMDKPSNCTNELYMMMR-------DCWHAVPSQRPTFKQLVEDLDRIVA 303
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 18/109 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
Q+A+ +EFL S + IHR ++ NIL++ K+ FG A D V+
Sbjct: 207 FQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDI---YKDPDYVRK--- 259
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
D+ LPL+ + APE + + + SD++SFG + + + +
Sbjct: 260 -----GDARLPLK----WMAPETIFDRVYTI--QSDVWSFGVLLWEIFS 297
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 52/109 (47%), Gaps = 22/109 (20%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+A +E+L S + IHR ++ N+L+T + K+ FG A + H+
Sbjct: 147 QVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLA-------------RDIHHI 192
Query: 238 EY--DVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
+Y + LP++ + APE + + + SD++SFG + + +
Sbjct: 193 DYYKKTTNGRLPVK----WMAPEALFDRI--YTHQSDVWSFGVLLWEIF 235
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 74/176 (42%), Gaps = 29/176 (16%)
Query: 108 DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEM 167
+A + ++HP +V ++ EP F + + + N+ RE E+
Sbjct: 57 EAAVMKEIKHPNLVQLLGVC---------TREPPFYIIIEFM-TYGNLLDYLRECNRQEV 106
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
S + + + QI+ ++E+L IHR ++ N L+ N K+ FG + D
Sbjct: 107 SAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGL---SRLMTGD 162
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
+ A + P++ +TAPE + N F SD+++FG + + +
Sbjct: 163 TXTAHA---------GAKFPIK----WTAPESL--AYNKFSIKSDVWAFGVLLWEI 203
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 123 VVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAES 182
VVQ +D+ K ++ V V VLG+ + +GL + +K + Q+ +
Sbjct: 103 VVQLLDDFK--ISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPC--VKKIIQQVLQG 158
Query: 183 LEFLHSNARLIHRAISPENILITSN 207
L++LH+ R+IH I PENIL++ N
Sbjct: 159 LDYLHTKCRIIHTDIKPENILLSVN 183
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 19/121 (15%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+Q+AE + +L S R IHR ++ N+L+ + K+G FG + Q +D V H
Sbjct: 128 VQVAEGMGYLESK-RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ--NDDHXVMQEHR 184
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI--ARKPLFDCNN 294
+ + APE + KT +F +SD + FG + + ++P N
Sbjct: 185 ------------KVPFAWCAPESL--KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 230
Query: 295 N 295
+
Sbjct: 231 S 231
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 18/109 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
Q+A+ +EFL S + IHR ++ NIL++ K+ FG A D V+
Sbjct: 200 FQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLA---RDIYKDPDYVRK--- 252
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
D+ LPL+ + APE + + + SD++SFG + + + +
Sbjct: 253 -----GDARLPLK----WMAPETIFDRVYTI--QSDVWSFGVLLWEIFS 290
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 29/115 (25%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGF--AISTDQ---AISDSSNV 231
+QI + +++L S + +HR ++ N+L+ S K+G FG AI TD+ + D +
Sbjct: 133 VQICKGMDYLGSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDS 191
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPE-LVRSKTNSFGCSSDIFSFGCVAYHLIA 285
F Y APE L++SK F +SD++SFG + L+
Sbjct: 192 PVFWY-------------------APECLMQSK---FYIASDVWSFGVTLHELLT 224
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 18/109 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
Q+A+ +EFL S + IHR ++ NIL++ K+ FG A D V+
Sbjct: 198 FQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLA---RDIYKDPDYVRK--- 250
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
D+ LPL+ + APE + + + SD++SFG + + + +
Sbjct: 251 -----GDARLPLK----WMAPETIFDRVYTI--QSDVWSFGVLLWEIFS 288
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 19/121 (15%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+Q+AE + +L S R IHR ++ N+L+ + K+G FG + Q +D V H
Sbjct: 118 VQVAEGMGYLESK-RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ--NDDHXVMQEHR 174
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI--ARKPLFDCNN 294
+ + APE + KT +F +SD + FG + + ++P N
Sbjct: 175 ------------KVPFAWCAPESL--KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 220
Query: 295 N 295
+
Sbjct: 221 S 221
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QIAE + F+ IHR + NIL++++ K+ FG A + I D+
Sbjct: 292 QIAEGMAFIEQR-NYIHRDLRAANILVSASLVCKIADFGLA----RVIEDN--------- 337
Query: 238 EYDV-EDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
EY E + P++ +TAPE + SF SD++SFG + ++
Sbjct: 338 EYTAREGAKFPIK----WTAPEAI--NFGSFTIKSDVWSFGILLMEIV 379
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 74/176 (42%), Gaps = 29/176 (16%)
Query: 108 DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEM 167
+A + ++HP +V ++ EP F + + + N+ RE E+
Sbjct: 57 EAAVMKEIKHPNLVQLLGVC---------TREPPFYIITEFM-TYGNLLDYLRECNRQEV 106
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
S + + + QI+ ++E+L IHR ++ N L+ N K+ FG + D
Sbjct: 107 SAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGL---SRLMTGD 162
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
+ A + P++ +TAPE + N F SD+++FG + + +
Sbjct: 163 TFTAHA---------GAKFPIK----WTAPESL--AYNKFSIKSDVWAFGVLLWEI 203
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 85/187 (45%), Gaps = 31/187 (16%)
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
+L EM +IA+ + +L++ + +HR ++ N ++ + K+G FG + I +
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMT----RDIYE 182
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL--IA 285
++ +Y + +LP++ + APE + K F SSD++SFG V + + +A
Sbjct: 183 TA-----YYRKGG--KGLLPVR----WMAPESL--KDGVFTTSSDMWSFGVVLWEITSLA 229
Query: 286 RKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDL---VPDLQKML-SANESFRPTAMDFTG 341
+P +N L ++ + P + V DL +M N RPT ++
Sbjct: 230 EQPYQGLSNE-----QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV- 283
Query: 342 SRFFRDD 348
+DD
Sbjct: 284 -NLLKDD 289
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 102/229 (44%), Gaps = 36/229 (15%)
Query: 116 RHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKHG 175
+H IV+++ A + + + + N L + + + +E G + L ++ H
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRR-KAEADLDKE-DGRPLELRDLLHF 165
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
Q+A+ + FL S IHR ++ N+L+T+ K+G FG A + I + SN
Sbjct: 166 SSQVAQGMAFLASK-NCIHRDVAARNVLLTNGHVAKIGDFGLA----RDIMNDSN----- 215
Query: 236 YAEYDVE-DSMLPLQPSLNYTAPELVRSKTNSFGC----SSDIFSFGCVAYHL--IARKP 288
Y V+ ++ LP++ + APE + F C SD++S+G + + + + P
Sbjct: 216 ---YIVKGNARLPVK----WMAPESI------FDCVYTVQSDVWSYGILLWEIFSLGLNP 262
Query: 289 LFDCNNNVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPT 335
N K Y + ++ AF+ P ++ +Q + + RPT
Sbjct: 263 YPGILVNSKFYKLVKDGYQMAQPAFA--PKNIYSIMQACWALEPTHRPT 309
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 29/115 (25%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGF--AISTDQ---AISDSSNV 231
+QI + +++L S + +HR ++ N+L+ S K+G FG AI TD+ + D +
Sbjct: 121 VQICKGMDYLGSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDS 179
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPE-LVRSKTNSFGCSSDIFSFGCVAYHLIA 285
F Y APE L++SK F +SD++SFG + L+
Sbjct: 180 PVFWY-------------------APECLMQSK---FYIASDVWSFGVTLHELLT 212
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 112/267 (41%), Gaps = 44/267 (16%)
Query: 82 RALSEARARAGLTKSAEDAF-LD--LVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVT 138
R + +A R + K + LD V+ + + +L HP ++++ A E+K M ++
Sbjct: 69 RCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF-EDKYEMVLIL 127
Query: 139 EPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAIS 198
E L E ++ E +MS E+ + + Q E L+ +H ++ ++H I
Sbjct: 128 E--------FLSGGELFDRIAAE--DYKMSEAEVINYMRQACEGLKHMHEHS-IVHLDIK 176
Query: 199 PENILITSNGA--WKLGGFGFA--ISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNY 254
PENI+ + A K+ FG A ++ D+ + ++ F
Sbjct: 177 PENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEF-------------------- 216
Query: 255 TAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTY---LSSDAF 311
APE+V + G +D+++ G + Y L++ F ++++ N DAF
Sbjct: 217 AAPEIVDRE--PVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAF 274
Query: 312 SSIPSDLVPDLQKMLSANESFRPTAMD 338
SS+ + ++ +L R T D
Sbjct: 275 SSVSPEAKDFIKNLLQKEPRKRLTVHD 301
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 74/176 (42%), Gaps = 29/176 (16%)
Query: 108 DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEM 167
+A + ++HP +V ++ EP F + + + N+ RE E+
Sbjct: 59 EAAVMKEIKHPNLVQLLGVC---------TREPPFYIIIEFM-TYGNLLDYLRECNRQEV 108
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
S + + + QI+ ++E+L IHR ++ N L+ N K+ FG + D
Sbjct: 109 SAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGL---SRLMTGD 164
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
+ A + P++ +TAPE + N F SD+++FG + + +
Sbjct: 165 TYTAHA---------GAKFPIK----WTAPESL--AYNKFSIKSDVWAFGVLLWEI 205
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 106/262 (40%), Gaps = 51/262 (19%)
Query: 33 PKALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAG 92
PKAL+D ++ + + G G ++ A R ++ V + ++ KR + AR
Sbjct: 4 PKALRDEYIMSK--TLGSGACGEVKLAFERKTCKK------VAIKIISKRKFAIGSAREA 55
Query: 93 LTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNF 152
D L+ V + L +L HP I+ + D + + V+GN
Sbjct: 56 ------DPALN-VETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN- 107
Query: 153 ENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITS---NGA 209
+ LK L Q+ ++++LH N +IHR + PEN+L++S +
Sbjct: 108 -------KRLKEATCKLY-----FYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCL 154
Query: 210 WKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPE-LVRSKTNSFG 268
K+ FG + + + ++S M L + Y APE LV T +
Sbjct: 155 IKITDFGHS----KILGETS--------------LMRTLCGTPTYLAPEVLVSVGTAGYN 196
Query: 269 CSSDIFSFGCVAYHLIARKPLF 290
+ D +S G + + ++ P F
Sbjct: 197 RAVDCWSLGVILFICLSGYPPF 218
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 19/121 (15%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+Q+AE + +L S R IHR ++ N+L+ + K+G FG + Q +D V H
Sbjct: 118 VQVAEGMGYLESK-RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ--NDDHYVMQEHR 174
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI--ARKPLFDCNN 294
+ + APE + KT +F +SD + FG + + ++P N
Sbjct: 175 ------------KVPFAWCAPESL--KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 220
Query: 295 N 295
+
Sbjct: 221 S 221
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 106/262 (40%), Gaps = 51/262 (19%)
Query: 33 PKALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAG 92
PKAL+D ++ + + G G ++ A R ++ V + ++ KR + AR
Sbjct: 5 PKALRDEYIMSK--TLGSGACGEVKLAFERKTCKK------VAIKIISKRKFAIGSAREA 56
Query: 93 LTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNF 152
D L+ V + L +L HP I+ + D + + V+GN
Sbjct: 57 ------DPALN-VETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN- 108
Query: 153 ENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITS---NGA 209
+ LK L Q+ ++++LH N +IHR + PEN+L++S +
Sbjct: 109 -------KRLKEATCKLY-----FYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCL 155
Query: 210 WKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPE-LVRSKTNSFG 268
K+ FG + + + ++S M L + Y APE LV T +
Sbjct: 156 IKITDFGHS----KILGETS--------------LMRTLCGTPTYLAPEVLVSVGTAGYN 197
Query: 269 CSSDIFSFGCVAYHLIARKPLF 290
+ D +S G + + ++ P F
Sbjct: 198 RAVDCWSLGVILFICLSGYPPF 219
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 74/176 (42%), Gaps = 29/176 (16%)
Query: 108 DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEM 167
+A + ++HP +V ++ EP F + + + N+ RE E+
Sbjct: 59 EAAVMKEIKHPNLVQLLGVC---------TREPPFYIIIEFM-TYGNLLDYLRECNRQEV 108
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
S + + + QI+ ++E+L IHR ++ N L+ N K+ FG + D
Sbjct: 109 SAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGL---SRLMTGD 164
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
+ A + P++ +TAPE + N F SD+++FG + + +
Sbjct: 165 TYTAHA---------GAKFPIK----WTAPESL--AYNKFSIKSDVWAFGVLLWEI 205
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 105/260 (40%), Gaps = 47/260 (18%)
Query: 33 PKALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAG 92
PKAL+D ++ + + G G ++ A R ++ V + ++ KR + AR
Sbjct: 11 PKALRDEYIMSK--TLGSGACGEVKLAFERKTCKK------VAIKIISKRKFAIGSAREA 62
Query: 93 LTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNF 152
D L+ V + L +L HP I+ + D + + V+GN
Sbjct: 63 ------DPALN-VETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN- 114
Query: 153 ENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKL 212
+ LK L Q+ ++++LH N +IHR + PEN+L++S
Sbjct: 115 -------KRLKEATCKLY-----FYQMLLAVQYLHENG-IIHRDLKPENVLLSSQ----- 156
Query: 213 GGFGFAISTDQAISDSSNVQAFHYAEYDVEDSML-PLQPSLNYTAPE-LVRSKTNSFGCS 270
D I + F +++ E S++ L + Y APE LV T + +
Sbjct: 157 -------EEDCLI----KITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRA 205
Query: 271 SDIFSFGCVAYHLIARKPLF 290
D +S G + + ++ P F
Sbjct: 206 VDCWSLGVILFICLSGYPPF 225
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 106/262 (40%), Gaps = 51/262 (19%)
Query: 33 PKALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAG 92
PKAL+D ++ + + G G ++ A R ++ V + ++ KR + AR
Sbjct: 5 PKALRDEYIMSK--TLGSGACGEVKLAFERKTCKK------VAIKIISKRKFAIGSAREA 56
Query: 93 LTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNF 152
D L+ V + L +L HP I+ + D + + V+GN
Sbjct: 57 ------DPALN-VETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN- 108
Query: 153 ENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITS---NGA 209
+ LK L Q+ ++++LH N +IHR + PEN+L++S +
Sbjct: 109 -------KRLKEATCKLY-----FYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCL 155
Query: 210 WKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPE-LVRSKTNSFG 268
K+ FG + + + ++S M L + Y APE LV T +
Sbjct: 156 IKITDFGHS----KILGETS--------------LMRTLCGTPTYLAPEVLVSVGTAGYN 197
Query: 269 CSSDIFSFGCVAYHLIARKPLF 290
+ D +S G + + ++ P F
Sbjct: 198 RAVDCWSLGVILFICLSGYPPF 219
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 19/121 (15%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+Q+AE + +L S R IHR ++ N+L+ + K+G FG + Q +D V H
Sbjct: 128 VQVAEGMGYLESK-RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ--NDDHYVMQEHR 184
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI--ARKPLFDCNN 294
+ + APE + KT +F +SD + FG + + ++P N
Sbjct: 185 ------------KVPFAWCAPESL--KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 230
Query: 295 N 295
+
Sbjct: 231 S 231
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 106/262 (40%), Gaps = 51/262 (19%)
Query: 33 PKALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAG 92
PKAL+D ++ + + G G ++ A R ++ V + ++ KR + AR
Sbjct: 5 PKALRDEYIMSK--TLGSGACGEVKLAFERKTCKK------VAIKIISKRKFAIGSAREA 56
Query: 93 LTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNF 152
D L+ V + L +L HP I+ + D + + V+GN
Sbjct: 57 ------DPALN-VETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN- 108
Query: 153 ENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITS---NGA 209
+ LK L Q+ ++++LH N +IHR + PEN+L++S +
Sbjct: 109 -------KRLKEATCKLY-----FYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCL 155
Query: 210 WKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPE-LVRSKTNSFG 268
K+ FG + + + ++S M L + Y APE LV T +
Sbjct: 156 IKITDFGHS----KILGETS--------------LMRTLCGTPTYLAPEVLVSVGTAGYN 197
Query: 269 CSSDIFSFGCVAYHLIARKPLF 290
+ D +S G + + ++ P F
Sbjct: 198 RAVDCWSLGVILFICLSGYPPF 219
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 19/121 (15%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+Q+AE + +L S R IHR ++ N+L+ + K+G FG + Q +D V H
Sbjct: 118 VQVAEGMGYLESK-RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ--NDDHYVMQEHR 174
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI--ARKPLFDCNN 294
+ + APE + KT +F +SD + FG + + ++P N
Sbjct: 175 ------------KVPFAWCAPESL--KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 220
Query: 295 N 295
+
Sbjct: 221 S 221
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 102/229 (44%), Gaps = 36/229 (15%)
Query: 116 RHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKHG 175
+H IV+++ A + + + + N L + + + +E G + L ++ H
Sbjct: 100 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRR-KAEADLDKE-DGRPLELRDLLHF 157
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
Q+A+ + FL S IHR ++ N+L+T+ K+G FG A + I + SN
Sbjct: 158 SSQVAQGMAFLASK-NCIHRDVAARNVLLTNGHVAKIGDFGLA----RDIMNDSN----- 207
Query: 236 YAEYDVE-DSMLPLQPSLNYTAPELVRSKTNSFGC----SSDIFSFGCVAYHL--IARKP 288
Y V+ ++ LP++ + APE + F C SD++S+G + + + + P
Sbjct: 208 ---YIVKGNARLPVK----WMAPESI------FDCVYTVQSDVWSYGILLWEIFSLGLNP 254
Query: 289 LFDCNNNVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPT 335
N K Y + ++ AF+ P ++ +Q + + RPT
Sbjct: 255 YPGILVNSKFYKLVKDGYQMAQPAFA--PKNIYSIMQACWALEPTHRPT 301
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 27/111 (24%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QIAE + ++ IHR + N+L++ + K+ FG A + I D+
Sbjct: 117 QIAEGMAYIERK-NYIHRDLRAANVLVSESLMCKIADFGLA----RVIEDN--------- 162
Query: 238 EYDV-EDSMLPLQPSLNYTAPELVRSKTNSFGC---SSDIFSFGCVAYHLI 284
EY E + P++ +TAPE + +FGC S+++SFG + Y ++
Sbjct: 163 EYTAREGAKFPIK----WTAPEAI-----NFGCFTIKSNVWSFGILLYEIV 204
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 81/189 (42%), Gaps = 36/189 (19%)
Query: 105 VRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKG 164
++ + L RHP I+ + Q + + MV E + S + F+ + K R
Sbjct: 58 IKREIQNLKLFRHPHIIKLYQVISTPTDFF-MVME--YVSGGEL---FDYICKHGR---- 107
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFA--ISTD 222
+ +E + QI ++++ H + ++HR + PEN+L+ ++ K+ FG + +S
Sbjct: 108 --VEEMEARRLFQQILSAVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164
Query: 223 QAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYH 282
+ + S S NY APE++ + + G DI+S G + Y
Sbjct: 165 EFLRTSCG--------------------SPNYAAPEVISGRLYA-GPEVDIWSCGVILYA 203
Query: 283 LIARKPLFD 291
L+ FD
Sbjct: 204 LLCGTLPFD 212
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 19/121 (15%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+Q+AE + +L S R IHR ++ N+L+ + K+G FG + Q +D V H
Sbjct: 122 VQVAEGMGYLESK-RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ--NDDHYVMQEHR 178
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI--ARKPLFDCNN 294
+ + APE + KT +F +SD + FG + + ++P N
Sbjct: 179 ------------KVPFAWCAPESL--KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 224
Query: 295 N 295
+
Sbjct: 225 S 225
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 81/207 (39%), Gaps = 56/207 (27%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ Q+ +++++LH + ++HR + PEN+L S + + S +
Sbjct: 122 IFQVLDAVKYLH-DLGIVHRDLKPENLLYYS------------------LDEDSKIMISD 162
Query: 236 YAEYDVEDSMLPLQPSL---NYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDC 292
+ +ED L + Y APE++ K + + D +S G +AY L+ P F
Sbjct: 163 FGLSKMEDPGSVLSTACGTPGYVAPEVLAQK--PYSKAVDCWSIGVIAYILLCGYPPFYD 220
Query: 293 NNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFFRDDTRLR 352
N+ K++ +++L A F + DD
Sbjct: 221 ENDAKLF-----------------------EQILKAEYEFDSP---------YWDDISDS 248
Query: 353 ALRFLDHMLERDNMQKSEFLKALSDMW 379
A F+ H++E+D ++ +AL W
Sbjct: 249 AKDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 19/121 (15%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+Q+AE + +L S R IHR ++ N+L+ + K+G FG + Q +D V H
Sbjct: 122 VQVAEGMGYLESK-RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ--NDDHYVMQEHR 178
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI--ARKPLFDCNN 294
+ + APE + KT +F +SD + FG + + ++P N
Sbjct: 179 ------------KVPFAWCAPESL--KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 224
Query: 295 N 295
+
Sbjct: 225 S 225
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 74/176 (42%), Gaps = 29/176 (16%)
Query: 108 DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEM 167
+A + ++HP +V ++ EP F + + + N+ RE E+
Sbjct: 64 EAAVMKEIKHPNLVQLLGVC---------TREPPFYIITEFM-TYGNLLDYLRECNRQEV 113
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
+ + + + QI+ ++E+L IHR ++ N L+ N K+ FG + D
Sbjct: 114 NAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGL---SRLMTGD 169
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
+ A + P++ +TAPE + N F SD+++FG + + +
Sbjct: 170 TYTAHA---------GAKFPIK----WTAPESL--AYNKFSIKSDVWAFGVLLWEI 210
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 20/109 (18%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
L ++L L N ++IHR I P NIL+ +G KL FG + +I+ + +
Sbjct: 132 LATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGC--- 188
Query: 237 AEYDVEDSMLPLQPSLNYTAPELV--RSKTNSFGCSSDIFSFGCVAYHL 283
+P Y APE + + + SD++S G Y L
Sbjct: 189 ------------RP---YMAPERIDPSASRQGYDVRSDVWSLGITLYEL 222
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 52/109 (47%), Gaps = 22/109 (20%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+A +E+L S + IHR ++ N+L+T + K+ FG A + H+
Sbjct: 199 QVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLA-------------RDIHHI 244
Query: 238 EY--DVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
+Y + LP++ + APE + + + SD++SFG + + +
Sbjct: 245 DYYKKTTNGRLPVK----WMAPEALFDRI--YTHQSDVWSFGVLLWEIF 287
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 74/176 (42%), Gaps = 29/176 (16%)
Query: 108 DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEM 167
+A + ++HP +V ++ EP F + + + N+ RE E+
Sbjct: 64 EAAVMKEIKHPNLVQLLGVC---------TREPPFYIITEFM-TYGNLLDYLRECNRQEV 113
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
+ + + + QI+ ++E+L IHR ++ N L+ N K+ FG + D
Sbjct: 114 NAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGL---SRLMTGD 169
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
+ A + P++ +TAPE + N F SD+++FG + + +
Sbjct: 170 TXTAHA---------GAKFPIK----WTAPESL--AYNKFSIKSDVWAFGVLLWEI 210
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 74/176 (42%), Gaps = 29/176 (16%)
Query: 108 DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEM 167
+A + ++HP +V ++ EP F + + + N+ RE E+
Sbjct: 266 EAAVMKEIKHPNLVQLLGVC---------TREPPFYIITEFM-TYGNLLDYLRECNRQEV 315
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
S + + + QI+ ++E+L IHR ++ N L+ N K+ FG + D
Sbjct: 316 SAVVLLYMATQISSAMEYLEKK-NFIHRNLAARNCLVGENHLVKVADFGL---SRLMTGD 371
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
+ A + P++ +TAPE + N F SD+++FG + + +
Sbjct: 372 TYTAHA---------GAKFPIK----WTAPESL--AYNKFSIKSDVWAFGVLLWEI 412
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 179 IAESLEFLHSNARLIHRAISPENILITS---NGAWKLGGFGFAISTDQAISDSS 229
I E++++LHS + HR + PEN+L TS N KL FGFA T D S
Sbjct: 126 IGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGEKYDKS 178
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 74/176 (42%), Gaps = 29/176 (16%)
Query: 108 DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEM 167
+A + ++HP +V ++ EP F + + + N+ RE E+
Sbjct: 63 EAAVMKEIKHPNLVQLLGVC---------TREPPFYIITEFM-TYGNLLDYLRECNRQEV 112
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
+ + + + QI+ ++E+L IHR ++ N L+ N K+ FG + D
Sbjct: 113 NAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGL---SRLMTGD 168
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
+ A + P++ +TAPE + N F SD+++FG + + +
Sbjct: 169 TYTAHA---------GAKFPIK----WTAPESL--AYNKFSIKSDVWAFGVLLWEI 209
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 74/176 (42%), Gaps = 29/176 (16%)
Query: 108 DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEM 167
+A + ++HP +V ++ EP F + + + N+ RE E+
Sbjct: 59 EAAVMKEIKHPNLVQLLGVC---------TREPPFYIITEFM-TYGNLLDYLRECNRQEV 108
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
+ + + + QI+ ++E+L IHR ++ N L+ N K+ FG + D
Sbjct: 109 NAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGL---SRLMTGD 164
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
+ A + P++ +TAPE + N F SD+++FG + + +
Sbjct: 165 TYTAHA---------GAKFPIK----WTAPESL--AYNKFSIKSDVWAFGVLLWEI 205
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 13/107 (12%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI +L +LH N + HR I PEN L ++N ++++ F +S + +
Sbjct: 176 QIFSALHYLH-NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKE--------FYKLNNG 226
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
EY M + + APE++ + S+G D +S G V HL+
Sbjct: 227 EY---YGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAG-VLLHLL 269
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 38/178 (21%)
Query: 116 RHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMK-H 174
RHP +V ++ DE +N M ++ + + EN + R L G ++ + M
Sbjct: 93 RHPHLVSLIGFCDE-RNEMILIYKYM-----------EN-GNLKRHLYGSDLPTMSMSWE 139
Query: 175 GLLQI----AESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSN 230
L+I A L +LH+ A +IHR + NIL+ N K+ FG IS D ++
Sbjct: 140 QRLEICIGAARGLHYLHTRA-IIHRDVKSINILLDENFVPKITDFG--ISKKGTELDQTH 196
Query: 231 VQAFHYAEYDVEDSMLPLQPSLNYTAPE-LVRSKTNSFGCSSDIFSFGCVAYHLIARK 287
+ ++ +L Y PE ++ + SD++SFG V + ++ +
Sbjct: 197 LXXV-------------VKGTLGYIDPEYFIKGRLTE---KSDVYSFGVVLFEVLCAR 238
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 35/122 (28%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ ++ +L++L N R+IHR + P+NIL+ +G + F A
Sbjct: 121 ICELVMALDYL-QNQRIIHRDMKPDNILLDEHGHVHITDFNIA----------------- 162
Query: 236 YAEYDVEDSMLPLQPSLN-------YTAPELVRSKTNS-FGCSSDIFSFGCVAYHLI-AR 286
+MLP + + Y APE+ S+ + + + D +S G AY L+ R
Sbjct: 163 --------AMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR 214
Query: 287 KP 288
+P
Sbjct: 215 RP 216
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 74/176 (42%), Gaps = 29/176 (16%)
Query: 108 DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEM 167
+A + ++HP +V ++ EP F + + + N+ RE E+
Sbjct: 59 EAAVMKEIKHPNLVQLLGVC---------TREPPFYIITEFM-TYGNLLDYLRECNRQEV 108
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
+ + + + QI+ ++E+L IHR ++ N L+ N K+ FG + D
Sbjct: 109 NAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGL---SRLMTGD 164
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
+ A + P++ +TAPE + N F SD+++FG + + +
Sbjct: 165 TYTAHA---------GAKFPIK----WTAPESL--AYNKFSIKSDVWAFGVLLWEI 205
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 74/176 (42%), Gaps = 29/176 (16%)
Query: 108 DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEM 167
+A + ++HP +V ++ EP F + + + N+ RE E+
Sbjct: 61 EAAVMKEIKHPNLVQLLGVC---------TREPPFYIITEFM-TYGNLLDYLRECNRQEV 110
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
+ + + + QI+ ++E+L IHR ++ N L+ N K+ FG + D
Sbjct: 111 NAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGL---SRLMTGD 166
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
+ A + P++ +TAPE + N F SD+++FG + + +
Sbjct: 167 TYTAHA---------GAKFPIK----WTAPESL--AYNKFSIKSDVWAFGVLLWEI 207
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 81/207 (39%), Gaps = 56/207 (27%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ Q+ +++++LH + ++HR + PEN+L S + + S +
Sbjct: 122 IFQVLDAVKYLH-DLGIVHRDLKPENLLYYS------------------LDEDSKIMISD 162
Query: 236 YAEYDVEDSMLPLQPSL---NYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDC 292
+ +ED L + Y APE++ K + + D +S G +AY L+ P F
Sbjct: 163 FGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP--YSKAVDCWSIGVIAYILLCGYPPFYD 220
Query: 293 NNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFFRDDTRLR 352
N+ K++ +++L A F + DD
Sbjct: 221 ENDAKLF-----------------------EQILKAEYEFDSP---------YWDDISDS 248
Query: 353 ALRFLDHMLERDNMQKSEFLKALSDMW 379
A F+ H++E+D ++ +AL W
Sbjct: 249 AKDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 74/176 (42%), Gaps = 29/176 (16%)
Query: 108 DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEM 167
+A + ++HP +V ++ EP F + + + N+ RE E+
Sbjct: 64 EAAVMKEIKHPNLVQLLGVC---------TREPPFYIITEFM-TYGNLLDYLRECNRQEV 113
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
+ + + + QI+ ++E+L IHR ++ N L+ N K+ FG + D
Sbjct: 114 NAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGL---SRLMTGD 169
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
+ A + P++ +TAPE + N F SD+++FG + + +
Sbjct: 170 TYTAHA---------GAKFPIK----WTAPESL--AYNKFSIKSDVWAFGVLLWEI 210
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 43/214 (20%)
Query: 81 KRALSEARARAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEP 140
+RA+ + + T S A LD V L +L HP I+ + + ++ +N
Sbjct: 48 ERAIKIIKKSSVTTTSNSGALLDEVAV----LKQLDHPNIMKLYEFFEDKRN-------- 95
Query: 141 LFASVANVLGNFENVSKVPRELKGLEM-SLLEMKHGLLQIAESLEFLHSNARLIHRAISP 199
+ V V E ++ K E+ + + MK Q+ +LH + ++HR + P
Sbjct: 96 -YYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK----QVLSGTTYLHKH-NIVHRDLKP 149
Query: 200 ENILITS---NGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTA 256
EN+L+ S + K+ FG + A ++V M + Y A
Sbjct: 150 ENLLLESKSRDALIKIVDFGLS------------------AHFEVGGKMKERLGTAYYIA 191
Query: 257 PELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
PE++R K + D++S G + Y L+ P F
Sbjct: 192 PEVLRKKYDE---KCDVWSCGVILYILLCGYPPF 222
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 34/181 (18%)
Query: 164 GLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQ 223
G + L ++ H Q+A+ + FL S IHR ++ N+L+T+ K+G FG A +
Sbjct: 152 GRPLELRDLLHFSSQVAQGMAFLASK-NCIHRDVAARNVLLTNGHVAKIGDFGLA----R 206
Query: 224 AISDSSNVQAFHYAEYDVE-DSMLPLQPSLNYTAPELVRSKTNSFGC----SSDIFSFGC 278
I + SN Y V+ ++ LP++ + APE + F C SD++S+G
Sbjct: 207 DIMNDSN--------YIVKGNARLPVK----WMAPESI------FDCVYTVQSDVWSYGI 248
Query: 279 VAYHL--IARKPLFDCNNNVKMY--MNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRP 334
+ + + + P N K Y + ++ AF+ P ++ +Q + + RP
Sbjct: 249 LLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFA--PKNIYSIMQACWALEPTHRP 306
Query: 335 T 335
T
Sbjct: 307 T 307
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 66/145 (45%), Gaps = 23/145 (15%)
Query: 193 IHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSL 252
+HR I P+N+L+ NG +L FG + ++D VQ+ S+ P
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLK----MNDDGTVQS----------SVAVGTP-- 240
Query: 253 NYTAPELVRSKTNS---FGCSSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSSD 309
+Y +PE++++ + +G D +S G Y ++ + F + V+ Y + +
Sbjct: 241 DYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF 300
Query: 310 AFSSIPSDLVPD----LQKMLSANE 330
F S +D+ + +Q+++ + E
Sbjct: 301 QFPSHVTDVSEEAKDLIQRLICSRE 325
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 86/213 (40%), Gaps = 41/213 (19%)
Query: 81 KRALSEARARAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEP 140
+RA+ + + T S A LD V L +L HP I+ + + ++ +N
Sbjct: 31 ERAIKIIKKSSVTTTSNSGALLDEVAV----LKQLDHPNIMKLYEFFEDKRN-------- 78
Query: 141 LFASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPE 200
+ V V E ++ K E+ + + Q+ +LH + ++HR + PE
Sbjct: 79 -YYLVMEVYRGGELFDEIILRQKFSEVDAAVI---MKQVLSGTTYLHKH-NIVHRDLKPE 133
Query: 201 NILITS---NGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAP 257
N+L+ S + K+ FG + A ++V M + Y AP
Sbjct: 134 NLLLESKSRDALIKIVDFGLS------------------AHFEVGGKMKERLGTAYYIAP 175
Query: 258 ELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
E++R K + D++S G + Y L+ P F
Sbjct: 176 EVLRKKYDE---KCDVWSCGVILYILLCGYPPF 205
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 94/239 (39%), Gaps = 37/239 (15%)
Query: 49 GPGLAWKLYSARARDVTRQQ----AQYPMVCVWVLDKRALSEARARAGLTKSAEDAFLDL 104
GP + + D+T + QY V V K +L+ A + FL
Sbjct: 1 GPSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK- 59
Query: 105 VRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKG 164
+A + ++HP +V ++ EP F + + + N+ RE
Sbjct: 60 ---EAAVMKEIKHPNLVQLLGVC---------TREPPFYIIIEFM-TYGNLLDYLRECNR 106
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
E++ + + + QI+ ++E+L IHR ++ N L+ N K+ FG +
Sbjct: 107 QEVNAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGL---SRLM 162
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
D+ A + P++ +TAPE + N F SD+++FG + + +
Sbjct: 163 TGDTXTAHA---------GAKFPIK----WTAPESL--AYNKFSIKSDVWAFGVLLWEI 206
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 74/176 (42%), Gaps = 29/176 (16%)
Query: 108 DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEM 167
+A + ++HP +V ++ EP F + + + N+ RE E+
Sbjct: 64 EAAVMKEIKHPNLVQLLGVC---------TREPPFYIIIEFM-TYGNLLDYLRECNRQEV 113
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
+ + + + QI+ ++E+L IHR ++ N L+ N K+ FG + D
Sbjct: 114 NAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGL---SRLMTGD 169
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
+ A + P++ +TAPE + N F SD+++FG + + +
Sbjct: 170 TYTAHA---------GAKFPIK----WTAPESL--AYNKFSIKSDVWAFGVLLWEI 210
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 74/176 (42%), Gaps = 29/176 (16%)
Query: 108 DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEM 167
+A + ++HP +V ++ EP F + + + N+ RE E+
Sbjct: 72 EAAVMKEIKHPNLVQLLGVC---------TREPPFYIITEFM-TYGNLLDYLRECNRQEV 121
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
+ + + + QI+ ++E+L IHR ++ N L+ N K+ FG + D
Sbjct: 122 NAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGL---SRLMTGD 177
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
+ A + P++ +TAPE + N F SD+++FG + + +
Sbjct: 178 TYTAHA---------GAKFPIK----WTAPESL--AYNKFSIKSDVWAFGVLLWEI 218
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 74/176 (42%), Gaps = 29/176 (16%)
Query: 108 DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEM 167
+A + ++HP +V ++ EP F + + + N+ RE E+
Sbjct: 61 EAAVMKEIKHPNLVQLLGVC---------TREPPFYIITEFM-TYGNLLDYLRECNRQEV 110
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
+ + + + QI+ ++E+L IHR ++ N L+ N K+ FG + D
Sbjct: 111 NAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGL---SRLMTGD 166
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
+ A + P++ +TAPE + N F SD+++FG + + +
Sbjct: 167 TYTAHA---------GAKFPIK----WTAPESL--AYNKFSIKSDVWAFGVLLWEI 207
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 81/207 (39%), Gaps = 56/207 (27%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ Q+ +++++LH + ++HR + PEN+L S + + S +
Sbjct: 122 IFQVLDAVKYLH-DLGIVHRDLKPENLLYYS------------------LDEDSKIMISD 162
Query: 236 YAEYDVEDSMLPLQPSL---NYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDC 292
+ +ED L + Y APE++ K + + D +S G +AY L+ P F
Sbjct: 163 FGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP--YSKAVDCWSIGVIAYILLCGYPPFYD 220
Query: 293 NNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFFRDDTRLR 352
N+ K++ +++L A F + DD
Sbjct: 221 ENDAKLF-----------------------EQILKAEYEFDSP---------YWDDISDS 248
Query: 353 ALRFLDHMLERDNMQKSEFLKALSDMW 379
A F+ H++E+D ++ +AL W
Sbjct: 249 AKDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 106/262 (40%), Gaps = 51/262 (19%)
Query: 33 PKALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAG 92
PKAL+D ++ + + G G ++ A R ++ V + ++ KR + AR
Sbjct: 130 PKALRDEYIMSK--TLGSGACGEVKLAFERKTCKK------VAIRIISKRKFAIGSAREA 181
Query: 93 LTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNF 152
D L+ V + L +L HP I+ + D + + V+GN
Sbjct: 182 ------DPALN-VETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN- 233
Query: 153 ENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITS---NGA 209
+ LK L Q+ ++++LH N +IHR + PEN+L++S +
Sbjct: 234 -------KRLKEATCKLY-----FYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCL 280
Query: 210 WKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPE-LVRSKTNSFG 268
K+ FG + + + ++S M L + Y APE LV T +
Sbjct: 281 IKITDFGHS----KILGETS--------------LMRTLCGTPTYLAPEVLVSVGTAGYN 322
Query: 269 CSSDIFSFGCVAYHLIARKPLF 290
+ D +S G + + ++ P F
Sbjct: 323 RAVDCWSLGVILFICLSGYPPF 344
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 100/258 (38%), Gaps = 63/258 (24%)
Query: 39 YELLDQIGSAGPGLAWKLYSAR-----ARDVTRQQAQYPMVCVWVLDKRALSEARARAGL 93
YE+L IG G K Y + A + R + ++ ++A E R L
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRF--------HRQAAEEIRILEHL 150
Query: 94 TKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFE 153
K +D ++ ++H+++ +N + M E L ++ +E
Sbjct: 151 RKQDKDNTMN----------------VIHMLENFT-FRNHICMTFELLSMNL------YE 187
Query: 154 NVSKVPRELKGLEMSLL-EMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKL 212
+ K + +G + L+ + H +LQ L+ LH N R+IH + PENIL+ G +
Sbjct: 188 LIKK--NKFQGFSLPLVRKFAHSILQ---CLDALHKN-RIIHCDLKPENILLKQQGRSGI 241
Query: 213 GGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSD 272
F S + + +Q S Y APE++ +G D
Sbjct: 242 KVIDFGSSCYEHQRVYTXIQ------------------SRFYRAPEVILGA--RYGMPID 281
Query: 273 IFSFGCVAYHLIARKPLF 290
++S GC+ L+ PL
Sbjct: 282 MWSLGCILAELLTGYPLL 299
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 81/207 (39%), Gaps = 56/207 (27%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFH 235
+ Q+ +++++LH + ++HR + PEN+L S + + S +
Sbjct: 122 IFQVLDAVKYLH-DLGIVHRDLKPENLLYYS------------------LDEDSKIMISD 162
Query: 236 YAEYDVEDSMLPLQPSL---NYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDC 292
+ +ED L + Y APE++ K + + D +S G +AY L+ P F
Sbjct: 163 FGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP--YSKAVDCWSIGVIAYILLCGYPPFYD 220
Query: 293 NNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFFRDDTRLR 352
N+ K++ +++L A F + DD
Sbjct: 221 ENDAKLF-----------------------EQILKAEYEFDSP---------YWDDISDS 248
Query: 353 ALRFLDHMLERDNMQKSEFLKALSDMW 379
A F+ H++E+D ++ +AL W
Sbjct: 249 AKDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 180 AESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEY 239
A + FLH N IHR I NIL+ K+ FG A ++++ +A+
Sbjct: 143 ANGINFLHENHH-IHRDIKSANILLDEAFTAKISDFGLARASEK------------FAQT 189
Query: 240 DVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
+ ++ + Y APE +R + SDI+SFG V +I P D
Sbjct: 190 VMXSRIV---GTTAYMAPEALRGEITP---KSDIYSFGVVLLEIITGLPAVD 235
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 4/124 (3%)
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
++H Q+ +L FLH N +L H + PENIL ++ L + + S V
Sbjct: 134 VRHMAYQLCHALRFLHEN-QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRV 192
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
F A +D E + + +Y PE++ + C D++S GC+ + LF
Sbjct: 193 ADFGSATFDHEHHT-TIVATRHYRPPEVILELGWAQPC--DVWSIGCILFEYYRGFTLFQ 249
Query: 292 CNNN 295
+ N
Sbjct: 250 THEN 253
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 66/145 (45%), Gaps = 23/145 (15%)
Query: 193 IHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSL 252
+HR I P+N+L+ NG +L FG + ++D VQ+ S+ P
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLK----MNDDGTVQS----------SVAVGTP-- 256
Query: 253 NYTAPELVRSKTNS---FGCSSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSSD 309
+Y +PE++++ + +G D +S G Y ++ + F + V+ Y + +
Sbjct: 257 DYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF 316
Query: 310 AFSSIPSDLVPD----LQKMLSANE 330
F S +D+ + +Q+++ + E
Sbjct: 317 QFPSHVTDVSEEAKDLIQRLICSRE 341
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 81/205 (39%), Gaps = 33/205 (16%)
Query: 87 ARARAGLTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVA 146
A A+ TKS E+ +V D L HP IV ++ A N ++ +V
Sbjct: 38 AAAKVIDTKSEEELEDYMVEIDI--LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVD 95
Query: 147 NVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITS 206
V+ E R L ++ ++ Q ++L +LH N ++IHR + NIL T
Sbjct: 96 AVMLELE------RPLTESQIQVV-----CKQTLDALNYLHDN-KIIHRDLKAGNILFTL 143
Query: 207 NGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELV---RSK 263
+G KL FG +S + +F Y + APE+V SK
Sbjct: 144 DGDIKLADFG--VSAKNTRTXIQRRDSFIGTPY--------------WMAPEVVMCETSK 187
Query: 264 TNSFGCSSDIFSFGCVAYHLIARKP 288
+ +D++S G + +P
Sbjct: 188 DRPYDYKADVWSLGITLIEMAEIEP 212
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 16/110 (14%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
LQ+A +E+L + + +HR ++ N ++ + K+ FG A D + +VQ +
Sbjct: 131 LQVARGMEYL-AEQKFVHRDLAARNCMLDESFTVKVADFGLA--RDILDREYYSVQQHRH 187
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIAR 286
A LP++ +TA E + +T F SD++SFG + + L+ R
Sbjct: 188 AR-------LPVK----WTALESL--QTYRFTTKSDVWSFGVLLWELLTR 224
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 106/262 (40%), Gaps = 51/262 (19%)
Query: 33 PKALQDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAG 92
PKAL+D ++ + + G G ++ A R ++ V + ++ KR + AR
Sbjct: 144 PKALRDEYIMSK--TLGSGACGEVKLAFERKTCKK------VAIRIISKRKFAIGSAREA 195
Query: 93 LTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNF 152
D L+ V + L +L HP I+ + D + + V+GN
Sbjct: 196 ------DPALN-VETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN- 247
Query: 153 ENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITS---NGA 209
+ LK L Q+ ++++LH N +IHR + PEN+L++S +
Sbjct: 248 -------KRLKEATCKLY-----FYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCL 294
Query: 210 WKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPE-LVRSKTNSFG 268
K+ FG + + + ++S M L + Y APE LV T +
Sbjct: 295 IKITDFGHS----KILGETS--------------LMRTLCGTPTYLAPEVLVSVGTAGYN 336
Query: 269 CSSDIFSFGCVAYHLIARKPLF 290
+ D +S G + + ++ P F
Sbjct: 337 RAVDCWSLGVILFICLSGYPPF 358
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 4/127 (3%)
Query: 169 LLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDS 228
L ++H Q+ +L FLH N +L H + PENIL ++ L + + S
Sbjct: 122 LPHVRHMAYQLCHALRFLHEN-QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS 180
Query: 229 SNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKP 288
V F A +D E + + +Y PE++ + C D++S GC+ +
Sbjct: 181 IRVADFGSATFDHEHHT-TIVATRHYRPPEVILELGWAQPC--DVWSIGCILFEYYRGFT 237
Query: 289 LFDCNNN 295
LF + N
Sbjct: 238 LFQTHEN 244
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 101/238 (42%), Gaps = 37/238 (15%)
Query: 104 LVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELK 163
LV+ + L RH I+H+ ++ E+ + M+ E F S ++ FE ++ EL
Sbjct: 47 LVKKEISILNIARHRNILHLHESF-ESMEELVMIFE--FISGLDI---FERINTSAFELN 100
Query: 164 GLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITS--NGAWKLGGFGFAIST 221
E ++ H Q+ E+L+FLHS+ + H I PENI+ + + K+ FG A
Sbjct: 101 --EREIVSYVH---QVCEALQFLHSH-NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL 154
Query: 222 DQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAY 281
D+ L + Y APE+ + + ++D++S G + Y
Sbjct: 155 KPG------------------DNFRLLFTAPEYYAPEV--HQHDVVSTATDMWSLGTLVY 194
Query: 282 HLIARKPLFDCNNN---VKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTA 336
L++ F N ++ MN +AF I + + + ++L R TA
Sbjct: 195 VLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTA 252
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 180 AESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEY 239
A + FLH N IHR I NIL+ K+ FG A ++++ +A+
Sbjct: 137 ANGINFLHENHH-IHRDIKSANILLDEAFTAKISDFGLARASEK------------FAQX 183
Query: 240 DVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
+ ++ + Y APE +R + SDI+SFG V +I P D
Sbjct: 184 VMXXRIV---GTTAYMAPEALRGEITP---KSDIYSFGVVLLEIITGLPAVD 229
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 62/143 (43%), Gaps = 23/143 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+ + + L +L +++HR + P NIL+ S G KL FG + Q I +N
Sbjct: 130 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV---SGQLIDSMAN------ 180
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL-IARKPLFDCNNN 295
+ +Y +PE R + + SDI+S G + + R P+ + +
Sbjct: 181 ----------SFVGTRSYMSPE--RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGS 228
Query: 296 VKMYMNTLTYLSSDAFSSIPSDL 318
+ ++ L Y+ ++ +PS +
Sbjct: 229 MAIF-ELLDYIVNEPPPKLPSGV 250
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 4/124 (3%)
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
++H Q+ +L FLH N +L H + PENIL ++ L + + S V
Sbjct: 157 VRHMAYQLCHALRFLHEN-QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRV 215
Query: 232 QAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
F A +D E + + +Y PE++ + C D++S GC+ + LF
Sbjct: 216 ADFGSATFDHEHHT-TIVATRHYRPPEVILELGWAQPC--DVWSIGCILFEYYRGFTLFQ 272
Query: 292 CNNN 295
+ N
Sbjct: 273 THEN 276
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 29/171 (16%)
Query: 114 RLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMK 173
RLRHP IV + A+ + N +++VTE L L + + E + L M+
Sbjct: 90 RLRHPNIVLFMGAVTQPPN-LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAY---- 144
Query: 174 HGLLQIAESLEFLHS-NARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQ 232
+A+ + +LH+ N ++HR + N+L+ K+ FG +S +A + S+
Sbjct: 145 ----DVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFG--LSRLKASTFLSSKS 198
Query: 233 AFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
A E + APE++R + ++ SD++SFG + + L
Sbjct: 199 AAGTPE---------------WMAPEVLRDEPSNE--KSDVYSFGVILWEL 232
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 180 AESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEY 239
A + FLH N IHR I NIL+ K+ FG A ++++ +A+
Sbjct: 143 ANGINFLHENHH-IHRDIKSANILLDEAFTAKISDFGLARASEK------------FAQT 189
Query: 240 DVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
+ ++ + Y APE +R + SDI+SFG V +I P D
Sbjct: 190 VMXXRIV---GTTAYMAPEALRGEITP---KSDIYSFGVVLLEIITGLPAVD 235
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 100/258 (38%), Gaps = 63/258 (24%)
Query: 39 YELLDQIGSAGPGLAWKLYSAR-----ARDVTRQQAQYPMVCVWVLDKRALSEARARAGL 93
YE+L IG G K Y + A + R + ++ ++A E R L
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRF--------HRQAAEEIRILEHL 150
Query: 94 TKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFE 153
K +D ++ ++H+++ +N + M E L ++ +E
Sbjct: 151 RKQDKDNTMN----------------VIHMLENFT-FRNHICMTFELLSMNL------YE 187
Query: 154 NVSKVPRELKGLEMSLL-EMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKL 212
+ K + +G + L+ + H +LQ L+ LH N R+IH + PENIL+ G +
Sbjct: 188 LIKK--NKFQGFSLPLVRKFAHSILQ---CLDALHKN-RIIHCDLKPENILLKQQGRSGI 241
Query: 213 GGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSD 272
F S + + +Q S Y APE++ +G D
Sbjct: 242 KVIDFGSSCYEHQRVYTXIQ------------------SRFYRAPEVILGA--RYGMPID 281
Query: 273 IFSFGCVAYHLIARKPLF 290
++S GC+ L+ PL
Sbjct: 282 MWSLGCILAELLTGYPLL 299
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 99/235 (42%), Gaps = 33/235 (14%)
Query: 105 VRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKG 164
V+ + + +L H ++ + A E+KN + +V E + F+ + L
Sbjct: 133 VKNEISVMNQLDHANLIQLYDAF-ESKNDIVLVMEYVDGGEL-----FDRIIDESYNLTE 186
Query: 165 LEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQA 224
L+ ++L MK QI E + +H ++H + PENIL + A ++ F ++
Sbjct: 187 LD-TILFMK----QICEGIRHMHQ-MYILHLDLKPENILCVNRDAKQIKIIDFGLAR--- 237
Query: 225 ISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
Y + + + + APE+V SF +D++S G +AY L+
Sbjct: 238 -------------RYKPREKLKVNFGTPEFLAPEVVNYDFVSF--PTDMWSVGVIAYMLL 282
Query: 285 ARKPLFDCNNNVKMYMNTLTY---LSSDAFSSIPSDLVPDLQKMLSANESFRPTA 336
+ F +N+ + N L L + F I + + K+L +S+R +A
Sbjct: 283 SGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISA 337
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 25/173 (14%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+ + +LH + HR I PEN+L+ K+ FG A F Y
Sbjct: 112 QLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLAT-------------VFRYN 157
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS-DIFSFGCVAYHLIARKPLF----DC 292
+ E + + +L Y APEL++ + F D++S G V ++A + + D
Sbjct: 158 --NRERLLNKMXGTLPYVAPELLKRR--EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
Query: 293 NNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFF 345
+ TYL + + I S + L K+L N S R T D R++
Sbjct: 214 XQEYSDWKEKKTYL--NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 264
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 74/176 (42%), Gaps = 29/176 (16%)
Query: 108 DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEM 167
+A + ++HP +V ++ EP F + + + N+ RE E+
Sbjct: 60 EAAVMKEIKHPNLVQLLGVC---------TREPPFYIITEFM-TYGNLLDYLRECNRQEV 109
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
+ + + + QI+ ++E+L IHR ++ N L+ N K+ FG + D
Sbjct: 110 NAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGL---SRLMTGD 165
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
+ A + P++ +TAPE + N F SD+++FG + + +
Sbjct: 166 TYTAPA---------GAKFPIK----WTAPESL--AYNKFSIKSDVWAFGVLLWEI 206
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+ + +LH + HR I PEN+L+ K+ FG A F Y
Sbjct: 112 QLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLAT-------------VFRYN 157
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS-DIFSFGCVAYHLIARK-PLFDCNNN 295
+ E + + +L Y APEL++ + F D++S G V ++A + P +++
Sbjct: 158 --NRERLLNKMXGTLPYVAPELLKRR--EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
Query: 296 VKMYMN---TLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFF 345
+ Y + TYL + + I S + L K+L N S R T D R++
Sbjct: 214 CQEYSDWKEKKTYL--NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 264
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 60/148 (40%), Gaps = 42/148 (28%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFA--ISTDQAISDSSNVQAF 234
+QIA+ + +L RL+HR ++ N+L+ S K+ FG A + D+
Sbjct: 147 VQIAKGMMYLEER-RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE----------- 194
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNN 294
EY+ + +P++ + A E + + F SD++S+G + L+
Sbjct: 195 --KEYNADGGKMPIK----WMALECIHYR--KFTHQSDVWSYGVTIWELMT--------- 237
Query: 295 NVKMYMNTLTYLSSDAFSSIPSDLVPDL 322
+ IP+ +PDL
Sbjct: 238 -----------FGGKPYDGIPTREIPDL 254
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+ + +LH + HR I PEN+L+ K+ FG A F Y
Sbjct: 113 QLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLAT-------------VFRYN 158
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS-DIFSFGCVAYHLIARK-PLFDCNNN 295
+ E + + +L Y APEL++ + F D++S G V ++A + P +++
Sbjct: 159 --NRERLLNKMXGTLPYVAPELLKRR--EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 214
Query: 296 VKMYMN---TLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFF 345
+ Y + TYL+ + I S + L K+L N S R T D R++
Sbjct: 215 CQEYSDWKEKKTYLNP--WKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 265
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 80/181 (44%), Gaps = 29/181 (16%)
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
SL +M +IA+ + +L++N + +HR ++ N ++ + K+G FG ++ D +D
Sbjct: 121 SLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFG--MTRDIXETD 177
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL--IA 285
+LP++ + +PE + K F SD++SFG V + + +A
Sbjct: 178 XXRKGG---------KGLLPVR----WMSPESL--KDGVFTTYSDVWSFGVVLWEIATLA 222
Query: 286 RKPLFDCNNNVKMYMNTLTYLSSDAFSSIPS---DLVPDLQKML-SANESFRPTAMDFTG 341
+P +N L ++ P D++ +L +M N RP+ ++
Sbjct: 223 EQPYQGLSNE-----QVLRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIIS 277
Query: 342 S 342
S
Sbjct: 278 S 278
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 53/119 (44%), Gaps = 20/119 (16%)
Query: 179 IAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAE 238
+ ++L +LH+ +IHR I ++IL+T +G KL FGF + + + Y
Sbjct: 150 VLQALAYLHAQG-VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPY-- 206
Query: 239 YDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
+ APE++ + + DI+S G + ++ +P + ++ V+
Sbjct: 207 ---------------WMAPEVI--SRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ 248
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+ + +LH + HR I PEN+L+ K+ FG A F Y
Sbjct: 112 QLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLAT-------------VFRYN 157
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS-DIFSFGCVAYHLIARK-PLFDCNNN 295
+ E + + +L Y APEL++ + F D++S G V ++A + P +++
Sbjct: 158 --NRERLLNKMXGTLPYVAPELLKRR--EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
Query: 296 VKMYMN---TLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFF 345
+ Y + TYL + + I S + L K+L N S R T D R++
Sbjct: 214 CQEYSDWKEKKTYL--NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 264
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 74/176 (42%), Gaps = 29/176 (16%)
Query: 108 DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEM 167
+A + ++HP +V ++ EP F + + + N+ RE E+
Sbjct: 61 EAAVMKEIKHPNLVQLLGVC---------TREPPFYIITEFM-TYGNLLDYLRECNRQEV 110
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
+ + + + QI+ ++E+L IHR ++ N L+ N K+ FG + D
Sbjct: 111 NAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGL---SRLMTGD 166
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
+ A + P++ +TAPE + N F SD+++FG + + +
Sbjct: 167 TYTAPA---------GAKFPIK----WTAPESL--AYNKFSIKSDVWAFGVLLWEI 207
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 40/183 (21%)
Query: 116 RHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFE--------NVSKVPRELKGLEM 167
+H IV+++ A + + + + N L N S P E ++
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEE----QL 163
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
S ++ H Q+A+ + FL S IHR ++ N+L+T+ K+G FG A + I +
Sbjct: 164 SSRDLLHFSSQVAQGMAFLASK-NCIHRDVAARNVLLTNGHVAKIGDFGLA----RDIMN 218
Query: 228 SSNVQAFHYAEYDVE-DSMLPLQPSLNYTAPELVRSKTNSFGC----SSDIFSFGCVAYH 282
SN Y V+ ++ LP++ + APE + F C SD++S+G + +
Sbjct: 219 DSN--------YIVKGNARLPVK----WMAPESI------FDCVYTVQSDVWSYGILLWE 260
Query: 283 LIA 285
+ +
Sbjct: 261 IFS 263
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 74/176 (42%), Gaps = 29/176 (16%)
Query: 108 DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEM 167
+A + ++HP +V ++ EP F + + + N+ RE E+
Sbjct: 263 EAAVMKEIKHPNLVQLLGVC---------TREPPFYIITEFM-TYGNLLDYLRECNRQEV 312
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
+ + + + QI+ ++E+L IHR ++ N L+ N K+ FG + D
Sbjct: 313 NAVVLLYMATQISSAMEYLEKK-NFIHRNLAARNCLVGENHLVKVADFGL---SRLMTGD 368
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
+ A + P++ +TAPE + N F SD+++FG + + +
Sbjct: 369 TYTAHA---------GAKFPIK----WTAPESL--AYNKFSIKSDVWAFGVLLWEI 409
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 28/124 (22%)
Query: 167 MSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS 226
+S ++ H Q+A+ + FL S IHR ++ N+L+T+ K+G FG A + I
Sbjct: 161 LSTRDLLHFSSQVAQGMAFLASK-NCIHRDVAARNVLLTNGHVAKIGDFGLA----RDIM 215
Query: 227 DSSNVQAFHYAEYDVE-DSMLPLQPSLNYTAPELVRSKTNSFGC----SSDIFSFGCVAY 281
+ SN Y V+ ++ LP++ + APE + F C SD++S+G + +
Sbjct: 216 NDSN--------YIVKGNARLPVK----WMAPESI------FDCVYTVQSDVWSYGILLW 257
Query: 282 HLIA 285
+ +
Sbjct: 258 EIFS 261
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 83/200 (41%), Gaps = 40/200 (20%)
Query: 118 PGIVHVVQAMDENKNAMAMVTEPL-FASVANVLGNFENVSKVPRELKGLEMSLLEMKHGL 176
P +V + A +++ + MV E + + N++ N++ K R
Sbjct: 134 PWVVQLFYAFQDDR-YLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA------------ 180
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
++ +L+ +HS IHR + P+N+L+ +G KL FG + ++
Sbjct: 181 -EVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK------------- 225
Query: 237 AEYDVEDSMLPLQPSL---NYTAPELVRSKTNS--FGCSSDIFSFGCVAYHLIARKPLFD 291
+ M+ ++ +Y +PE+++S+ +G D +S G Y ++ F
Sbjct: 226 ------EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 279
Query: 292 CNNNVKMYMNTLTYLSSDAF 311
++ V Y + + +S F
Sbjct: 280 ADSLVGTYSKIMNHKNSLTF 299
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 74/176 (42%), Gaps = 29/176 (16%)
Query: 108 DAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEM 167
+A + ++HP +V ++ EP F + + + N+ RE E+
Sbjct: 305 EAAVMKEIKHPNLVQLLGVC---------TREPPFYIITEFM-TYGNLLDYLRECNRQEV 354
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
+ + + + QI+ ++E+L IHR ++ N L+ N K+ FG + D
Sbjct: 355 NAVVLLYMATQISSAMEYL-EKKNFIHRNLAARNCLVGENHLVKVADFGL---SRLMTGD 410
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
+ A + P++ +TAPE + N F SD+++FG + + +
Sbjct: 411 TYTAHA---------GAKFPIK----WTAPESL--AYNKFSIKSDVWAFGVLLWEI 451
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 101/258 (39%), Gaps = 63/258 (24%)
Query: 39 YELLDQIGSAGPGLAWKLYSAR-----ARDVTRQQAQYPMVCVWVLDKRALSEARARAGL 93
YE+L IG G K Y + A + R + ++ ++A E R L
Sbjct: 99 YEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRF--------HRQAAEEIRILEHL 150
Query: 94 TKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFE 153
K +D ++ ++H+++ +N + M E L ++ +E
Sbjct: 151 RKQDKDNTMN----------------VIHMLENFT-FRNHICMTFELLSMNL------YE 187
Query: 154 NVSKVPRELKGLEMSLL-EMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKL 212
+ K + +G + L+ + H +LQ L+ LH N R+IH + PENIL+ G +
Sbjct: 188 LIKK--NKFQGFSLPLVRKFAHSILQ---CLDALHKN-RIIHCDLKPENILLKQQGRSGI 241
Query: 213 GGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSD 272
F S Y+ + +Q S Y APE++ +G D
Sbjct: 242 KVIDFGSSC-----------------YEHQRVYXXIQ-SRFYRAPEVILGA--RYGMPID 281
Query: 273 IFSFGCVAYHLIARKPLF 290
++S GC+ L+ PL
Sbjct: 282 MWSLGCILAELLTGYPLL 299
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 60/148 (40%), Gaps = 42/148 (28%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFA--ISTDQAISDSSNVQAF 234
+QIA+ + +L RL+HR ++ N+L+ S K+ FG A + D+
Sbjct: 124 VQIAKGMMYLEER-RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE----------- 171
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNN 294
EY+ + +P++ + A E + + F SD++S+G + L+
Sbjct: 172 --KEYNADGGKMPIK----WMALECIHYR--KFTHQSDVWSYGVTIWELMT--------- 214
Query: 295 NVKMYMNTLTYLSSDAFSSIPSDLVPDL 322
+ IP+ +PDL
Sbjct: 215 -----------FGGKPYDGIPTREIPDL 231
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 80/181 (44%), Gaps = 29/181 (16%)
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
SL +M +IA+ + +L++N + +HR ++ N ++ + K+G FG ++ D +D
Sbjct: 130 SLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFG--MTRDIXETD 186
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL--IA 285
+LP++ + +PE + K F SD++SFG V + + +A
Sbjct: 187 XXRKGG---------KGLLPVR----WMSPESL--KDGVFTTYSDVWSFGVVLWEIATLA 231
Query: 286 RKPLFDCNNNVKMYMNTLTYLSSDAFSSIPS---DLVPDLQKML-SANESFRPTAMDFTG 341
+P +N L ++ P D++ +L +M N RP+ ++
Sbjct: 232 EQPYQGLSNE-----QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 286
Query: 342 S 342
S
Sbjct: 287 S 287
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 19/112 (16%)
Query: 180 AESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEY 239
A + FLH N IHR I NIL+ K+ FG A ++++ +A+
Sbjct: 134 ANGINFLHENHH-IHRDIKSANILLDEAFTAKISDFGLARASEK------------FAQX 180
Query: 240 DVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
++ + Y APE +R + SDI+SFG V +I P D
Sbjct: 181 VXXSRIV---GTTAYXAPEALRGEITP---KSDIYSFGVVLLEIITGLPAVD 226
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 38/146 (26%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+QIA+ + +L + RL+HR ++ N+L+ S K+ FG A D
Sbjct: 126 MQIAKGMSYLE-DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLD-----------IDE 173
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNV 296
EY + +P++ + A E + + F SD++S+G + L+
Sbjct: 174 TEYHADGGKVPIK----WMALESILRR--RFTHQSDVWSYGVTVWELMT----------- 216
Query: 297 KMYMNTLTYLSSDAFSSIPSDLVPDL 322
+ + IP+ +PDL
Sbjct: 217 ---------FGAKPYDGIPAREIPDL 233
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 83/200 (41%), Gaps = 40/200 (20%)
Query: 118 PGIVHVVQAMDENKNAMAMVTEPL-FASVANVLGNFENVSKVPRELKGLEMSLLEMKHGL 176
P +V + A +++ + MV E + + N++ N++ K R
Sbjct: 134 PWVVQLFYAFQDDR-YLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA------------ 180
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
++ +L+ +HS IHR + P+N+L+ +G KL FG + ++
Sbjct: 181 -EVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK------------- 225
Query: 237 AEYDVEDSMLPLQPSL---NYTAPELVRSKTNS--FGCSSDIFSFGCVAYHLIARKPLFD 291
+ M+ ++ +Y +PE+++S+ +G D +S G Y ++ F
Sbjct: 226 ------EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 279
Query: 292 CNNNVKMYMNTLTYLSSDAF 311
++ V Y + + +S F
Sbjct: 280 ADSLVGTYSKIMNHKNSLTF 299
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+ + +LH + HR I PEN+L+ K+ FG A F Y
Sbjct: 112 QLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYN 157
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS-DIFSFGCVAYHLIARK-PLFDCNNN 295
+ E + + +L Y APEL++ + F D++S G V ++A + P +++
Sbjct: 158 --NRERLLNKMXGTLPYVAPELLKRR--EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
Query: 296 VKMYMN---TLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFF 345
+ Y + TYL+ + I S + L K+L N S R T D R++
Sbjct: 214 CQEYSDWKEKKTYLNP--WKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 264
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 83/200 (41%), Gaps = 40/200 (20%)
Query: 118 PGIVHVVQAMDENKNAMAMVTEPL-FASVANVLGNFENVSKVPRELKGLEMSLLEMKHGL 176
P +V + A +++ + MV E + + N++ N++ K R
Sbjct: 129 PWVVQLFYAFQDDR-YLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA------------ 175
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
++ +L+ +HS IHR + P+N+L+ +G KL FG + ++
Sbjct: 176 -EVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK------------- 220
Query: 237 AEYDVEDSMLPLQPSL---NYTAPELVRSKTNS--FGCSSDIFSFGCVAYHLIARKPLFD 291
+ M+ ++ +Y +PE+++S+ +G D +S G Y ++ F
Sbjct: 221 ------EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 274
Query: 292 CNNNVKMYMNTLTYLSSDAF 311
++ V Y + + +S F
Sbjct: 275 ADSLVGTYSKIMNHKNSLTF 294
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 22/114 (19%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+ + L +L +++HR + P NIL+ S G KL FG + Q I +N
Sbjct: 121 IAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGV---SGQLIDSMAN------ 171
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL-IARKPL 289
+ +Y APE R + + SDI+S G L + R P+
Sbjct: 172 ----------SFVGTRSYMAPE--RLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+ + +LH + HR I PEN+L+ K+ FG A F Y
Sbjct: 112 QLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLAT-------------VFRYN 157
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS-DIFSFGCVAYHLIARK-PLFDCNNN 295
+ E + + +L Y APEL++ + F D++S G V ++A + P +++
Sbjct: 158 --NRERLLNKMCGTLPYVAPELLKRR--EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
Query: 296 VKMYMN---TLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFF 345
+ Y + TYL + + I S + L K+L N S R T D R++
Sbjct: 214 CQEYSDWKEKKTYL--NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 264
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+ + +LH + HR I PEN+L+ K+ FG A F Y
Sbjct: 112 QLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLAT-------------VFRYN 157
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS-DIFSFGCVAYHLIARK-PLFDCNNN 295
+ E + + +L Y APEL++ + F D++S G V ++A + P +++
Sbjct: 158 --NRERLLNKMCGTLPYVAPELLKRR--EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
Query: 296 VKMYMN---TLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFF 345
+ Y + TYL + + I S + L K+L N S R T D R++
Sbjct: 214 CQEYSDWKEKKTYL--NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 264
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+ + +LH + HR I PEN+L+ K+ FG A F Y
Sbjct: 112 QLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLAT-------------VFRYN 157
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS-DIFSFGCVAYHLIARK-PLFDCNNN 295
+ E + + +L Y APEL++ + F D++S G V ++A + P +++
Sbjct: 158 --NRERLLNKMCGTLPYVAPELLKRR--EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
Query: 296 VKMYMN---TLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFF 345
+ Y + TYL + + I S + L K+L N S R T D R++
Sbjct: 214 CQEYSDWKEKKTYL--NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 264
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 78/183 (42%), Gaps = 25/183 (13%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+ + +LH + HR I PEN+L+ K+ FG A F Y
Sbjct: 113 QLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLAT-------------VFRYN 158
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS-DIFSFGCVAYHLIARK-PLFDCNNN 295
+ E + + +L Y APEL++ + F D++S G V ++A + P +++
Sbjct: 159 --NRERLLNKMCGTLPYVAPELLKRR--EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 214
Query: 296 VKMYMN---TLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFFRDDTRLR 352
+ Y + TYL + + I S + L K+L N S R T D R++ +
Sbjct: 215 CQEYSDWKEKKTYL--NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKG 272
Query: 353 ALR 355
A R
Sbjct: 273 AKR 275
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 78/183 (42%), Gaps = 25/183 (13%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+ + +LH + HR I PEN+L+ K+ FG A F Y
Sbjct: 113 QLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLAT-------------VFRYN 158
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS-DIFSFGCVAYHLIARK-PLFDCNNN 295
+ E + + +L Y APEL++ + F D++S G V ++A + P +++
Sbjct: 159 --NRERLLNKMCGTLPYVAPELLKRR--EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 214
Query: 296 VKMYMN---TLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFFRDDTRLR 352
+ Y + TYL + + I S + L K+L N S R T D R++ +
Sbjct: 215 CQEYSDWKEKKTYL--NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKG 272
Query: 353 ALR 355
A R
Sbjct: 273 AKR 275
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 78/183 (42%), Gaps = 25/183 (13%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+ + +LH + HR I PEN+L+ K+ FG A F Y
Sbjct: 113 QLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLAT-------------VFRYN 158
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS-DIFSFGCVAYHLIARK-PLFDCNNN 295
+ E + + +L Y APEL++ + F D++S G V ++A + P +++
Sbjct: 159 --NRERLLNKMCGTLPYVAPELLKRR--EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 214
Query: 296 VKMYMN---TLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFFRDDTRLR 352
+ Y + TYL + + I S + L K+L N S R T D R++ +
Sbjct: 215 CQEYSDWKEKKTYL--NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKG 272
Query: 353 ALR 355
A R
Sbjct: 273 AKR 275
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+ + +LH + HR I PEN+L+ K+ FG A F Y
Sbjct: 111 QLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLAT-------------VFRYN 156
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS-DIFSFGCVAYHLIARK-PLFDCNNN 295
+ E + + +L Y APEL++ + F D++S G V ++A + P +++
Sbjct: 157 --NRERLLNKMCGTLPYVAPELLKRR--EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 212
Query: 296 VKMYMN---TLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFF 345
+ Y + TYL + + I S + L K+L N S R T D R++
Sbjct: 213 CQEYSDWKEKKTYL--NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 263
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 72/171 (42%), Gaps = 29/171 (16%)
Query: 114 RLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMK 173
RLRHP IV + A+ + N +++VTE L L + + E + L M+
Sbjct: 90 RLRHPNIVLFMGAVTQPPN-LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAY---- 144
Query: 174 HGLLQIAESLEFLHS-NARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQ 232
+A+ + +LH+ N ++HR + N+L+ K+ FG + S
Sbjct: 145 ----DVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAA 200
Query: 233 AFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
+ + APE++R + ++ SD++SFG + + L
Sbjct: 201 G-----------------TPEWMAPEVLRDEPSNE--KSDVYSFGVILWEL 232
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 51/109 (46%), Gaps = 22/109 (20%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+A +E+L S + IHR ++ N+L+T + K+ FG A + H+
Sbjct: 158 QVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLA-------------RDIHHI 203
Query: 238 EY--DVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
+ + LP++ + APE + + + SD++SFG + + +
Sbjct: 204 DXXKKTTNGRLPVK----WMAPEALFDRI--YTHQSDVWSFGVLLWEIF 246
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 80/181 (44%), Gaps = 29/181 (16%)
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
SL +M +IA+ + +L++N + +HR ++ N ++ + K+G FG ++ D +D
Sbjct: 129 SLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFG--MTRDIYETD 185
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL--IA 285
+LP++ + +PE + K F SD++SFG V + + +A
Sbjct: 186 YYRKGG---------KGLLPVR----WMSPESL--KDGVFTTYSDVWSFGVVLWEIATLA 230
Query: 286 RKPLFDCNNNVKMYMNTLTYLSSDAFSSIPS---DLVPDLQKML-SANESFRPTAMDFTG 341
+P +N L ++ P D++ +L +M N RP+ ++
Sbjct: 231 EQPYQGLSNE-----QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 285
Query: 342 S 342
S
Sbjct: 286 S 286
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+ + +LH + HR I PEN+L+ K+ FG A F Y
Sbjct: 113 QLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLAT-------------VFRYN 158
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS-DIFSFGCVAYHLIARK-PLFDCNNN 295
+ E + + +L Y APEL++ + F D++S G V ++A + P +++
Sbjct: 159 --NRERLLNKMCGTLPYVAPELLKRR--EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 214
Query: 296 VKMYMN---TLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFF 345
+ Y + TYL+ + I S + L K+L N S R T D R++
Sbjct: 215 CQEYSDWKEKKTYLNP--WKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 265
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 93/233 (39%), Gaps = 44/233 (18%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L +L HP I+ + + + E+ ++ +V E F+ + K R S +
Sbjct: 75 LKKLDHPNIMKLFEIL-EDSSSFYIVGELYTGGEL-----FDEIIKRKR------FSEHD 122
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITS---NGAWKLGGFGFAISTDQAISDS 228
+ Q+ + ++H + ++HR + PENIL+ S + K+ FG + Q
Sbjct: 123 AARIIKQVFSGITYMHKH-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK 181
Query: 229 SNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKP 288
+ + Y APE++R ++ D++S G + Y L++ P
Sbjct: 182 DRIGTAY------------------YIAPEVLRG---TYDEKCDVWSAGVILYILLSGTP 220
Query: 289 LFDCNNNVKMYMNTLTYLSSDAFS-----SIPSDLVPDLQKMLSANESFRPTA 336
F N + T AF +I D ++KML+ + S R TA
Sbjct: 221 PFYGKNEYDILKRVET--GKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITA 271
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 78/183 (42%), Gaps = 25/183 (13%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+ + +LH + HR I PEN+L+ K+ FG A F Y
Sbjct: 112 QLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLAT-------------VFRYN 157
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS-DIFSFGCVAYHLIARK-PLFDCNNN 295
+ E + + +L Y APEL++ + F D++S G V ++A + P +++
Sbjct: 158 --NRERLLNKMCGTLPYVAPELLKRR--EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
Query: 296 VKMYMN---TLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFFRDDTRLR 352
+ Y + TYL + + I S + L K+L N S R T D R++ +
Sbjct: 214 CQEYSDWKEKKTYL--NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKG 271
Query: 353 ALR 355
A R
Sbjct: 272 AKR 274
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 83/181 (45%), Gaps = 29/181 (16%)
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
SL +M +IA+ + +L++N + +HR ++ N ++ + K+G FG ++ D +D
Sbjct: 129 SLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFG--MTRDIYETD 185
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL--IA 285
+Y + +LP++ + +PE + K F SD++SFG V + + +A
Sbjct: 186 -------YYRKGG--KGLLPVR----WMSPESL--KDGVFTTYSDVWSFGVVLWEIATLA 230
Query: 286 RKPLFDCNNNVKMYMNTLTYLSSDAFSSIPS---DLVPDLQKML-SANESFRPTAMDFTG 341
+P +N L ++ P D++ +L +M N RP+ ++
Sbjct: 231 EQPYQGLSNE-----QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 285
Query: 342 S 342
S
Sbjct: 286 S 286
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 78/183 (42%), Gaps = 25/183 (13%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+ + +LH + HR I PEN+L+ K+ FG A F Y
Sbjct: 113 QLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLAT-------------VFRYN 158
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS-DIFSFGCVAYHLIARK-PLFDCNNN 295
+ E + + +L Y APEL++ + F D++S G V ++A + P +++
Sbjct: 159 --NRERLLNKMCGTLPYVAPELLKRR--EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 214
Query: 296 VKMYMN---TLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFFRDDTRLR 352
+ Y + TYL + + I S + L K+L N S R T D R++ +
Sbjct: 215 CQEYSDWKEKKTYL--NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKG 272
Query: 353 ALR 355
A R
Sbjct: 273 AKR 275
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 21/101 (20%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+ + + L +L +++HR + P NIL+ S G KL FG + Q I + +N
Sbjct: 114 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV---SGQLIDEMAN------ 164
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFG 277
+ +Y +PE R + + SDI+S G
Sbjct: 165 ----------EFVGTRSYMSPE--RLQGTHYSVQSDIWSMG 193
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 80/181 (44%), Gaps = 29/181 (16%)
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
SL +M +IA+ + +L++N + +HR ++ N ++ + K+G FG ++ D +D
Sbjct: 126 SLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFG--MTRDIYETD 182
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL--IA 285
+LP++ + +PE + K F SD++SFG V + + +A
Sbjct: 183 YYRKGG---------KGLLPVR----WMSPESL--KDGVFTTYSDVWSFGVVLWEIATLA 227
Query: 286 RKPLFDCNNNVKMYMNTLTYLSSDAFSSIPS---DLVPDLQKML-SANESFRPTAMDFTG 341
+P +N L ++ P D++ +L +M N RP+ ++
Sbjct: 228 EQPYQGLSNE-----QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 282
Query: 342 S 342
S
Sbjct: 283 S 283
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 93/233 (39%), Gaps = 44/233 (18%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L +L HP I+ + + + E+ ++ +V E F+ + K R S +
Sbjct: 75 LKKLDHPNIMKLFEIL-EDSSSFYIVGELYTGGEL-----FDEIIKRKR------FSEHD 122
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITS---NGAWKLGGFGFAISTDQAISDS 228
+ Q+ + ++H + ++HR + PENIL+ S + K+ FG + Q
Sbjct: 123 AARIIKQVFSGITYMHKH-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK 181
Query: 229 SNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKP 288
+ + Y APE++R ++ D++S G + Y L++ P
Sbjct: 182 DRIGTAY------------------YIAPEVLRG---TYDEKCDVWSAGVILYILLSGTP 220
Query: 289 LFDCNNNVKMYMNTLTYLSSDAFS-----SIPSDLVPDLQKMLSANESFRPTA 336
F N + T AF +I D ++KML+ + S R TA
Sbjct: 221 PFYGKNEYDILKRVET--GKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITA 271
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 28/123 (22%)
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
S ++ H Q+A+ + FL S IHR ++ N+L+T+ K+G FG A + I +
Sbjct: 162 STRDLLHFSSQVAQGMAFLASK-NCIHRDVAARNVLLTNGHVAKIGDFGLA----RDIMN 216
Query: 228 SSNVQAFHYAEYDVE-DSMLPLQPSLNYTAPELVRSKTNSFGC----SSDIFSFGCVAYH 282
SN Y V+ ++ LP++ + APE + F C SD++S+G + +
Sbjct: 217 DSN--------YIVKGNARLPVK----WMAPESI------FDCVYTVQSDVWSYGILLWE 258
Query: 283 LIA 285
+ +
Sbjct: 259 IFS 261
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 80/181 (44%), Gaps = 29/181 (16%)
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
SL +M +IA+ + +L++N + +HR ++ N ++ + K+G FG ++ D +D
Sbjct: 136 SLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFG--MTRDIYETD 192
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL--IA 285
+LP++ + +PE + K F SD++SFG V + + +A
Sbjct: 193 YYRKGG---------KGLLPVR----WMSPESL--KDGVFTTYSDVWSFGVVLWEIATLA 237
Query: 286 RKPLFDCNNNVKMYMNTLTYLSSDAFSSIPS---DLVPDLQKML-SANESFRPTAMDFTG 341
+P +N L ++ P D++ +L +M N RP+ ++
Sbjct: 238 EQPYQGLSNE-----QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 292
Query: 342 S 342
S
Sbjct: 293 S 293
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 80/181 (44%), Gaps = 29/181 (16%)
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
SL +M +IA+ + +L++N + +HR ++ N ++ + K+G FG ++ D +D
Sbjct: 136 SLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFG--MTRDIYETD 192
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL--IA 285
+LP++ + +PE + K F SD++SFG V + + +A
Sbjct: 193 YYRKGG---------KGLLPVR----WMSPESL--KDGVFTTYSDVWSFGVVLWEIATLA 237
Query: 286 RKPLFDCNNNVKMYMNTLTYLSSDAFSSIPS---DLVPDLQKML-SANESFRPTAMDFTG 341
+P +N L ++ P D++ +L +M N RP+ ++
Sbjct: 238 EQPYQGLSNE-----QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 292
Query: 342 S 342
S
Sbjct: 293 S 293
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+ + +LH + HR I PEN+L+ K+ FG A F Y
Sbjct: 112 QLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLAT-------------VFRYN 157
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS-DIFSFGCVAYHLIARK-PLFDCNNN 295
+ E + + +L Y APEL++ + F D++S G V ++A + P +++
Sbjct: 158 --NRERLLNKMCGTLPYVAPELLKRR--EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
Query: 296 VKMYMN---TLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFF 345
+ Y + TYL+ + I S + L K+L N S R T D R++
Sbjct: 214 CQEYSDWKEKKTYLNP--WKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 264
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 83/181 (45%), Gaps = 29/181 (16%)
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
SL +M +IA+ + +L++N + +HR ++ N ++ + K+G FG ++ D +D
Sbjct: 127 SLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFG--MTRDIYETD 183
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL--IA 285
+Y + +LP++ + +PE + K F SD++SFG V + + +A
Sbjct: 184 -------YYRKGG--KGLLPVR----WMSPESL--KDGVFTTYSDVWSFGVVLWEIATLA 228
Query: 286 RKPLFDCNNNVKMYMNTLTYLSSDAFSSIPS---DLVPDLQKML-SANESFRPTAMDFTG 341
+P +N L ++ P D++ +L +M N RP+ ++
Sbjct: 229 EQPYQGLSNE-----QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 283
Query: 342 S 342
S
Sbjct: 284 S 284
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 83/181 (45%), Gaps = 29/181 (16%)
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
SL +M +IA+ + +L++N + +HR ++ N ++ + K+G FG ++ D +D
Sbjct: 123 SLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFG--MTRDIYETD 179
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL--IA 285
+Y + +LP++ + +PE + K F SD++SFG V + + +A
Sbjct: 180 -------YYRKGG--KGLLPVR----WMSPESL--KDGVFTTYSDVWSFGVVLWEIATLA 224
Query: 286 RKPLFDCNNNVKMYMNTLTYLSSDAFSSIPS---DLVPDLQKML-SANESFRPTAMDFTG 341
+P +N L ++ P D++ +L +M N RP+ ++
Sbjct: 225 EQPYQGLSNE-----QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 279
Query: 342 S 342
S
Sbjct: 280 S 280
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 20/98 (20%)
Query: 194 HRAISPENILITSNGAWKLGGFGFA-ISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSL 252
HR + PENIL++++ L FG A +TD+ ++ N +L
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVG-----------------TL 199
Query: 253 NYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
Y APE ++ +DI++ CV Y + P +
Sbjct: 200 YYXAPERFSESHATY--RADIYALTCVLYECLTGSPPY 235
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 93/233 (39%), Gaps = 44/233 (18%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L +L HP I+ + + + E+ ++ +V E F+ + K R S +
Sbjct: 75 LKKLDHPNIMKLFEIL-EDSSSFYIVGELYTGGEL-----FDEIIKRKR------FSEHD 122
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITS---NGAWKLGGFGFAISTDQAISDS 228
+ Q+ + ++H + ++HR + PENIL+ S + K+ FG + Q
Sbjct: 123 AARIIKQVFSGITYMHKH-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK 181
Query: 229 SNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKP 288
+ + Y APE++R ++ D++S G + Y L++ P
Sbjct: 182 DRIGTAY------------------YIAPEVLRG---TYDEKCDVWSAGVILYILLSGTP 220
Query: 289 LFDCNNNVKMYMNTLTYLSSDAFS-----SIPSDLVPDLQKMLSANESFRPTA 336
F N + T AF +I D ++KML+ + S R TA
Sbjct: 221 PFYGKNEYDILKRVET--GKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITA 271
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+ + +LH + HR I PEN+L+ K+ FG A F Y
Sbjct: 112 QLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYN 157
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS-DIFSFGCVAYHLIARK-PLFDCNNN 295
+ E + + +L Y APEL++ + F D++S G V ++A + P +++
Sbjct: 158 --NRERLLNKMCGTLPYVAPELLKRR--EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
Query: 296 VKMYMN---TLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFF 345
+ Y + TYL+ + I S + L K+L N S R T D R++
Sbjct: 214 CQEYSDWKEKKTYLNP--WKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 264
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 123 VVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAES 182
VVQ +D+ K ++ + V VLG+ + +GL + + K + Q+ +
Sbjct: 97 VVQLIDDFK--ISGMNGIHVCMVFEVLGHHLLKWIIKSNYQGLPVRCV--KSIIRQVLQG 152
Query: 183 LEFLHSNARLIHRAISPENILITSNGAW 210
L++LHS ++IH I PENIL+ + A+
Sbjct: 153 LDYLHSKCKIIHTDIKPENILMCVDDAY 180
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+ + +LH + HR I PEN+L+ K+ FG A F Y
Sbjct: 112 QLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLAT-------------VFRYN 157
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS-DIFSFGCVAYHLIARK-PLFDCNNN 295
+ E + + +L Y APEL++ + F D++S G V ++A + P +++
Sbjct: 158 --NRERLLNKMCGTLPYVAPELLKRR--EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
Query: 296 VKMYMN---TLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFF 345
+ Y + TYL + + I S + L K+L N S R T D R++
Sbjct: 214 CQEYSDWKEKKTYL--NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 264
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 22/114 (19%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+ + + L +L +++HR + P NIL+ S G KL FG + Q I +N
Sbjct: 138 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV---SGQLIDSMAN------ 188
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL-IARKPL 289
+ +Y +PE R + + SDI+S G + + R P+
Sbjct: 189 ----------SFVGTRSYMSPE--RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 96/230 (41%), Gaps = 43/230 (18%)
Query: 152 FENVSKVPRELKGLEMSL--LEMKHGLLQIAESLEFLHSNARLIHRAISPENILIT-SNG 208
FE+V+ + K L +L +++ + +I ++L++ HS ++HR + P N+LI +
Sbjct: 113 FEHVNNT--DFKQLYQTLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVLIDHEHR 169
Query: 209 AWKLGGFGFAISTDQAISDSSNVQAFHYA-EYDVEDSMLPLQPSLNYTAPELVRSKTNSF 267
+L +G A + +H EY+V + S + PEL+ +
Sbjct: 170 KLRLIDWGLA-------------EFYHPGQEYNVRVA------SRYFKGPELL-VDYQMY 209
Query: 268 GCSSDIFSFGCVAYHLIARK-PLFDCNNNVKMYMNTLTYLSS----DAFSSIPSDLVPDL 322
S D++S GC+ +I RK P F ++N + L + D +L P
Sbjct: 210 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRF 269
Query: 323 QKMLSANESFRPTAMDFTGSRFFRDDTRL----RALRFLDHMLERDNMQK 368
+L + R RF + + AL FLD +L D+ +
Sbjct: 270 NDILGRHSRKR-------WERFVHSENQHLVSPEALDFLDKLLRYDHQSR 312
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 80/181 (44%), Gaps = 29/181 (16%)
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
SL +M +IA+ + +L++N + +HR ++ N ++ + K+G FG ++ D +D
Sbjct: 130 SLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFG--MTRDIYETD 186
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL--IA 285
+LP++ + +PE + K F SD++SFG V + + +A
Sbjct: 187 YYRKGG---------KGLLPVR----WMSPESL--KDGVFTTYSDVWSFGVVLWEIATLA 231
Query: 286 RKPLFDCNNNVKMYMNTLTYLSSDAFSSIPS---DLVPDLQKML-SANESFRPTAMDFTG 341
+P +N L ++ P D++ +L +M N RP+ ++
Sbjct: 232 EQPYQGLSNE-----QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 286
Query: 342 S 342
S
Sbjct: 287 S 287
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 76/178 (42%), Gaps = 38/178 (21%)
Query: 116 RHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMK-H 174
RHP +V ++ DE +N M ++ + + EN + R L G ++ + M
Sbjct: 93 RHPHLVSLIGFCDE-RNEMILIYKYM-----------EN-GNLKRHLYGSDLPTMSMSWE 139
Query: 175 GLLQI----AESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSN 230
L+I A L +LH+ A +IHR + NIL+ N K+ FG + +
Sbjct: 140 QRLEICIGAARGLHYLHTRA-IIHRDVKSINILLDENFVPKITDFGIS-------KKGTE 191
Query: 231 VQAFHYAEYDVEDSMLPLQPSLNYTAPE-LVRSKTNSFGCSSDIFSFGCVAYHLIARK 287
+ H ++ +L Y PE ++ + SD++SFG V + ++ +
Sbjct: 192 LGQTHLXXV--------VKGTLGYIDPEYFIKGRLTE---KSDVYSFGVVLFEVLCAR 238
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+ + +LH + HR I PEN+L+ K+ FG A F Y
Sbjct: 113 QLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLAT-------------VFRYN 158
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS-DIFSFGCVAYHLIARK-PLFDCNNN 295
+ E + + +L Y APEL++ + F D++S G V ++A + P +++
Sbjct: 159 --NRERLLNKMCGTLPYVAPELLKRR--EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 214
Query: 296 VKMYMN---TLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFF 345
+ Y + TYL+ + I S + L K+L N S R T D R++
Sbjct: 215 CQEYSDWKEKKTYLNP--WKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 265
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+ + +LH + HR I PEN+L+ K+ FG A F Y
Sbjct: 113 QLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYN 158
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS-DIFSFGCVAYHLIARK-PLFDCNNN 295
+ E + + +L Y APEL++ + F D++S G V ++A + P +++
Sbjct: 159 --NRERLLNKMCGTLPYVAPELLKRR--EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 214
Query: 296 VKMYMN---TLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFF 345
+ Y + TYL+ + I S + L K+L N S R T D R++
Sbjct: 215 CQEYSDWKEKKTYLNP--WKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 265
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+ + +LH + HR I PEN+L+ K+ FG A F Y
Sbjct: 112 QLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYN 157
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS-DIFSFGCVAYHLIARK-PLFDCNNN 295
+ E + + +L Y APEL++ + F D++S G V ++A + P +++
Sbjct: 158 --NRERLLNKMCGTLPYVAPELLKRR--EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
Query: 296 VKMYMN---TLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFF 345
+ Y + TYL+ + I S + L K+L N S R T D R++
Sbjct: 214 CQEYSDWKEKKTYLNP--WKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 264
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 80/181 (44%), Gaps = 29/181 (16%)
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
SL +M +IA+ + +L++N + +HR ++ N ++ + K+G FG ++ D +D
Sbjct: 158 SLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFG--MTRDIYETD 214
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL--IA 285
+LP++ + +PE + K F SD++SFG V + + +A
Sbjct: 215 YYRKGG---------KGLLPVR----WMSPESL--KDGVFTTYSDVWSFGVVLWEIATLA 259
Query: 286 RKPLFDCNNNVKMYMNTLTYLSSDAFSSIPS---DLVPDLQKML-SANESFRPTAMDFTG 341
+P +N L ++ P D++ +L +M N RP+ ++
Sbjct: 260 EQPYQGLSNE-----QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 314
Query: 342 S 342
S
Sbjct: 315 S 315
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 91/233 (39%), Gaps = 31/233 (13%)
Query: 107 ADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLE 166
A+ + V LRH I+ + A +NK+ L + F+ +++ ++G+
Sbjct: 85 AEIYQTVMLRHENILGFIAA--DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI 142
Query: 167 MSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS 226
L GL + + + HR + +NIL+ NG + G A+ D A +
Sbjct: 143 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA-T 201
Query: 227 DSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTN-----SFGCSSDIFSFGCVAY 281
D+ ++ H + Y APE++ N SF +DI++ G V +
Sbjct: 202 DTIDIAPNHRV------------GTKRYMAPEVLDDSINMKHFESFK-RADIYAMGLVFW 248
Query: 282 HLIARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRP 334
+ R + + + + L Y + +PSD + + + + RP
Sbjct: 249 EIARRCSIGGIHEDYQ-----LPY-----YDLVPSDPSVEEMRKVVCEQKLRP 291
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 99/237 (41%), Gaps = 34/237 (14%)
Query: 93 LTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNF 152
+ K AE A R + LV I + A ++ N ++ + + +L F
Sbjct: 112 MLKRAETA---CFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKF 168
Query: 153 ENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKL 212
E+ ++P E+ L EM + +S+ LH +HR I P+NIL+ NG +L
Sbjct: 169 ED--RLPEEMA--RFYLAEMVIAI----DSVHQLH----YVHRDIKPDNILMDMNGHIRL 216
Query: 213 GGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNS---FGC 269
FG S + + D + V+ S+ P +Y +PE++++ +G
Sbjct: 217 ADFG---SCLKLMEDGT-----------VQSSVAVGTP--DYISPEILQAMEGGKGRYGP 260
Query: 270 SSDIFSFGCVAYHLIARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKML 326
D +S G Y ++ + F + V+ Y + + F + +D+ + + ++
Sbjct: 261 ECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLI 317
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 22/114 (19%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+ + + L +L +++HR + P NIL+ S G KL FG + ++++S
Sbjct: 173 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-------- 224
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL-IARKPL 289
+ +Y +PE R + + SDI+S G + + R P+
Sbjct: 225 -----------FVGTRSYMSPE--RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 25/116 (21%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITS---NGAWKLGGFGFAISTDQAISDSSNVQAF 234
Q+ + +LH + ++HR + PEN+L+ S + K+ FG +
Sbjct: 144 QVLSGVTYLHKH-NIVHRDLKPENLLLESKEKDALIKIVDFGLS---------------- 186
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
A ++ + M + Y APE++R K + D++S G + + L+A P F
Sbjct: 187 --AVFENQKKMKERLGTAYYIAPEVLRKKYDE---KCDVWSIGVILFILLAGYPPF 237
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 22/114 (19%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+ + + L +L +++HR + P NIL+ S G KL FG + Q I +N
Sbjct: 111 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV---SGQLIDSMAN------ 161
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL-IARKPL 289
+ +Y +PE R + + SDI+S G + + R P+
Sbjct: 162 ----------SFVGTRSYMSPE--RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 22/114 (19%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+ + + L +L +++HR + P NIL+ S G KL FG + Q I +N
Sbjct: 111 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV---SGQLIDSMAN------ 161
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL-IARKPL 289
+ +Y +PE R + + SDI+S G + + R P+
Sbjct: 162 ----------SFVGTRSYMSPE--RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 22/114 (19%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+ + + L +L +++HR + P NIL+ S G KL FG + Q I +N
Sbjct: 111 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV---SGQLIDSMAN------ 161
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL-IARKPL 289
+ +Y +PE R + + SDI+S G + + R P+
Sbjct: 162 ----------SFVGTRSYMSPE--RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 40/216 (18%)
Query: 93 LTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPL----------- 141
L +++E A D R +A L L+H IV E + + MV E +
Sbjct: 56 LKEASESARQDFQR-EAELLTMLQHQHIVRFFGVCTEGR-PLLMVFEYMRHGDLNRFLRS 113
Query: 142 FASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPEN 201
A +L E+V+ P L L ++ G++ +A L F +HR ++ N
Sbjct: 114 HGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA-GLHF-------VHRDLATRN 165
Query: 202 ILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVR 261
L+ K+G FG +S D +D V +MLP++ + PE +
Sbjct: 166 CLVGQGLVVKIGDFG--MSRDIYSTDYYRVGG---------RTMLPIR----WMPPESIL 210
Query: 262 SKTNSFGCSSDIFSFGCVAYHLI--ARKPLFDCNNN 295
+ F SD++SFG V + + ++P + +N
Sbjct: 211 YR--KFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT 244
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 22/114 (19%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+ + + L +L +++HR + P NIL+ S G KL FG + Q I +N
Sbjct: 111 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV---SGQLIDSMAN------ 161
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL-IARKPL 289
+ +Y +PE R + + SDI+S G + + R P+
Sbjct: 162 ----------SFVGTRSYMSPE--RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 22/114 (19%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+ + + L +L +++HR + P NIL+ S G KL FG + Q I +N
Sbjct: 111 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV---SGQLIDSMAN------ 161
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL-IARKPL 289
+ +Y +PE R + + SDI+S G + + R P+
Sbjct: 162 ----------SFVGTRSYMSPE--RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 20/109 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+A+ + FL S IHR ++ NIL+T K+ FG A + I + SN
Sbjct: 169 QVAKGMAFLASK-NCIHRDLAARNILLTHGRITKICDFGLA----RDIKNDSN------- 216
Query: 238 EYDVE-DSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
Y V+ ++ LP++ + APE + + +F SD++S+G + L +
Sbjct: 217 -YVVKGNARLPVK----WMAPESIFNCVYTF--ESDVWSYGIFLWELFS 258
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 40/216 (18%)
Query: 93 LTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPL----------- 141
L +++E A D R +A L L+H IV E + + MV E +
Sbjct: 50 LKEASESARQDFQR-EAELLTMLQHQHIVRFFGVCTEGR-PLLMVFEYMRHGDLNRFLRS 107
Query: 142 FASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPEN 201
A +L E+V+ P L L ++ G++ +A L F +HR ++ N
Sbjct: 108 HGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA-GLHF-------VHRDLATRN 159
Query: 202 ILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVR 261
L+ K+G FG +S D +D V +MLP++ + PE +
Sbjct: 160 CLVGQGLVVKIGDFG--MSRDIYSTDYYRVGG---------RTMLPIR----WMPPESIL 204
Query: 262 SKTNSFGCSSDIFSFGCVAYHLI--ARKPLFDCNNN 295
+ F SD++SFG V + + ++P + +N
Sbjct: 205 YR--KFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT 238
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 20/109 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+A+ + FL S IHR ++ NIL+T K+ FG A + I + SN
Sbjct: 176 QVAKGMAFLASK-NCIHRDLAARNILLTHGRITKICDFGLA----RHIKNDSN------- 223
Query: 238 EYDVE-DSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
Y V+ ++ LP++ + APE + + +F SD++S+G + L +
Sbjct: 224 -YVVKGNARLPVK----WMAPESIFNCVYTF--ESDVWSYGIFLWELFS 265
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/120 (20%), Positives = 52/120 (43%), Gaps = 25/120 (20%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+ + ++H N +++HR + PEN+L+ S S +N++ +
Sbjct: 158 QVLSGITYMHKN-KIVHRDLKPENLLLESK------------------SKDANIRIIDFG 198
Query: 238 ---EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNN 294
++ M + Y APE++ ++ D++S G + Y L++ P F+ N
Sbjct: 199 LSTHFEASKKMKDKIGTAYYIAPEVLH---GTYDEKCDVWSTGVILYILLSGCPPFNGAN 255
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 91/233 (39%), Gaps = 31/233 (13%)
Query: 107 ADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLE 166
A+ + V LRH I+ + A +NK+ L + F+ +++ ++G+
Sbjct: 72 AEIYQTVMLRHENILGFIAA--DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI 129
Query: 167 MSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS 226
L GL + + + HR + +NIL+ NG + G A+ D A +
Sbjct: 130 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA-T 188
Query: 227 DSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTN-----SFGCSSDIFSFGCVAY 281
D+ ++ H + Y APE++ N SF +DI++ G V +
Sbjct: 189 DTIDIAPNHRV------------GTKRYMAPEVLDDSINMKHFESFK-RADIYAMGLVFW 235
Query: 282 HLIARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRP 334
+ R + + + + L Y + +PSD + + + + RP
Sbjct: 236 EIARRCSIGGIHEDYQ-----LPY-----YDLVPSDPSVEEMRKVVCEQKLRP 278
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/120 (20%), Positives = 52/120 (43%), Gaps = 25/120 (20%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+ + ++H N +++HR + PEN+L+ S S +N++ +
Sbjct: 157 QVLSGITYMHKN-KIVHRDLKPENLLLESK------------------SKDANIRIIDFG 197
Query: 238 ---EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNN 294
++ M + Y APE++ ++ D++S G + Y L++ P F+ N
Sbjct: 198 LSTHFEASKKMKDKIGTAYYIAPEVLH---GTYDEKCDVWSTGVILYILLSGCPPFNGAN 254
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 21/113 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
+I L+FLHS +++R + +NIL+ +G K+ FG + + + D+ +
Sbjct: 127 EIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFG--MCKENMLGDAKTNE----- 178
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYH-LIARKPL 289
+ +Y APE++ + + S D +SFG + Y LI + P
Sbjct: 179 ----------FCGTPDYIAPEILLGQ--KYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 20/114 (17%)
Query: 180 AESLEFLHSNA--RLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
A L +LH + ++IHR + NIL+ +G FG A D Y
Sbjct: 149 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-------------YK 195
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
+ V + ++ ++ + APE + + +S +D+F +G + LI + FD
Sbjct: 196 DXHVXXA---VRGTIGHIAPEYLSTGKSS--EKTDVFGYGVMLLELITGQRAFD 244
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 79/181 (43%), Gaps = 29/181 (16%)
Query: 168 SLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISD 227
SL +M +IA+ + +L++N + +HR ++ N + + K+G FG ++ D +D
Sbjct: 123 SLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCXVAEDFTVKIGDFG--MTRDIYETD 179
Query: 228 SSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL--IA 285
+LP++ + +PE + K F SD++SFG V + + +A
Sbjct: 180 YYRKGG---------KGLLPVR----WMSPESL--KDGVFTTYSDVWSFGVVLWEIATLA 224
Query: 286 RKPLFDCNNNVKMYMNTLTYLSSDAFSSIPS---DLVPDLQKML-SANESFRPTAMDFTG 341
+P +N L ++ P D++ +L +M N RP+ ++
Sbjct: 225 EQPYQGLSNE-----QVLRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIIS 279
Query: 342 S 342
S
Sbjct: 280 S 280
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 20/109 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+A+ + FL S IHR ++ NIL+T K+ FG A + I + SN
Sbjct: 171 QVAKGMAFLASK-NCIHRDLAARNILLTHGRITKICDFGLA----RDIKNDSN------- 218
Query: 238 EYDVE-DSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
Y V+ ++ LP++ + APE + + +F SD++S+G + L +
Sbjct: 219 -YVVKGNARLPVK----WMAPESIFNCVYTF--ESDVWSYGIFLWELFS 260
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 20/109 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+A+ + FL S IHR ++ NIL+T K+ FG A + I + SN
Sbjct: 176 QVAKGMAFLASK-NCIHRDLAARNILLTHGRITKICDFGLA----RDIKNDSN------- 223
Query: 238 EYDVE-DSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
Y V+ ++ LP++ + APE + + +F SD++S+G + L +
Sbjct: 224 -YVVKGNARLPVK----WMAPESIFNCVYTF--ESDVWSYGIFLWELFS 265
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 40/216 (18%)
Query: 93 LTKSAEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPL----------- 141
L +++E A D R +A L L+H IV E + + MV E +
Sbjct: 79 LKEASESARQDFQR-EAELLTMLQHQHIVRFFGVCTEGR-PLLMVFEYMRHGDLNRFLRS 136
Query: 142 FASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPEN 201
A +L E+V+ P L L ++ G++ +A L F +HR ++ N
Sbjct: 137 HGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA-GLHF-------VHRDLATRN 188
Query: 202 ILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVR 261
L+ K+G FG +S D +D V +MLP++ + PE +
Sbjct: 189 CLVGQGLVVKIGDFG--MSRDIYSTDYYRVGG---------RTMLPIR----WMPPESIL 233
Query: 262 SKTNSFGCSSDIFSFGCVAYHLI--ARKPLFDCNNN 295
+ F SD++SFG V + + ++P + +N
Sbjct: 234 YR--KFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT 267
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 59/118 (50%), Gaps = 13/118 (11%)
Query: 167 MSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS 226
M+ L + + L + ++L+++H + +HR++ +ILI+ +G L G +S IS
Sbjct: 109 MNELAIAYILQGVLKALDYIH-HMGYVHRSVKASHILISVDGKVYLSGLRSNLSM---IS 164
Query: 227 DSSNVQAFH-YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
+ H + +Y V+ +LP + +PE+++ + SDI+S G A L
Sbjct: 165 HGQRQRVVHDFPKYSVK--VLP------WLSPEVLQQNLQGYDAKSDIYSVGITACEL 214
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 76/173 (43%), Gaps = 23/173 (13%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
++A++L + H ++IHR I PEN+L+ G K+ FG+++ +
Sbjct: 131 ELADALMYCHGK-KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKT--------- 180
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
+ +L+Y PE++ + ++ D++ G + Y L+ P F+ ++ +
Sbjct: 181 ----------MCGTLDYLPPEMIEGRMHNE--KVDLWCIGVLCYELLVGNPPFESASHNE 228
Query: 298 MYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMDFTGSRFFRDDTR 350
Y + + +S+P+ + K+L N S R + + R ++R
Sbjct: 229 TY-RRIVKVDLKFPASVPTGAQDLISKLLRHNPSERLPLAQVSAHPWVRANSR 280
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 69/170 (40%), Gaps = 34/170 (20%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+ + ++H N +++HR + PEN+L+ S S +N++ +
Sbjct: 140 QVLSGITYMHKN-KIVHRDLKPENLLLESK------------------SKDANIRIIDFG 180
Query: 238 ---EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNN 294
++ M + Y APE++ ++ D++S G + Y L++ P F+ N
Sbjct: 181 LSTHFEASKKMKDKIGTAYYIAPEVLH---GTYDEKCDVWSTGVILYILLSGCPPFNGAN 237
Query: 295 ------NVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPTAMD 338
V+ T S DL+ +KML+ S R +A D
Sbjct: 238 EYDILKKVEKGKYTFELPQWKKVSESAKDLI---RKMLTYVPSMRISARD 284
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 20/109 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+A+ + FL S IHR ++ NIL+T K+ FG A + I + SN
Sbjct: 153 QVAKGMAFLASK-NCIHRDLAARNILLTHGRITKICDFGLA----RDIKNDSN------- 200
Query: 238 EYDVE-DSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
Y V+ ++ LP++ + APE + + +F SD++S+G + L +
Sbjct: 201 -YVVKGNARLPVK----WMAPESIFNCVYTF--ESDVWSYGIFLWELFS 242
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/120 (20%), Positives = 52/120 (43%), Gaps = 25/120 (20%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+ + ++H N +++HR + PEN+L+ S S +N++ +
Sbjct: 134 QVLSGITYMHKN-KIVHRDLKPENLLLESK------------------SKDANIRIIDFG 174
Query: 238 ---EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNN 294
++ M + Y APE++ ++ D++S G + Y L++ P F+ N
Sbjct: 175 LSTHFEASKKMKDKIGTAYYIAPEVLH---GTYDEKCDVWSTGVILYILLSGCPPFNGAN 231
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 36.6 bits (83), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 59/118 (50%), Gaps = 13/118 (11%)
Query: 167 MSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS 226
M+ L + + L + ++L+++H + +HR++ +ILI+ +G L G +S IS
Sbjct: 125 MNELAIAYILQGVLKALDYIH-HMGYVHRSVKASHILISVDGKVYLSGLRSNLSM---IS 180
Query: 227 DSSNVQAFH-YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHL 283
+ H + +Y V+ +LP + +PE+++ + SDI+S G A L
Sbjct: 181 HGQRQRVVHDFPKYSVK--VLP------WLSPEVLQQNLQGYDAKSDIYSVGITACEL 230
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 36.6 bits (83), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+QIAE + +L + RL+HR ++ N+L+ + K+ FG A +
Sbjct: 121 VQIAEGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLA-----------KLLGAEE 168
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
EY E +P++ + A E + + + SD++S+G + L+
Sbjct: 169 KEYHAEGGKVPIK----WMALESILHRIYTH--QSDVWSYGVTVWELM 210
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 36.6 bits (83), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 64/127 (50%), Gaps = 19/127 (14%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
LQ+A+ +++L S + +HR ++ N ++ K+ FG A + + D +Y
Sbjct: 158 LQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA----RDMYDKE-----YY 207
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARK--PLFDCNN 294
+ ++ + LP++ + A E + +T F SD++SFG + + L+ R P D N
Sbjct: 208 SVHNKTGAKLPVK----WMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 261
Query: 295 -NVKMYM 300
++ +Y+
Sbjct: 262 FDITVYL 268
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 36.6 bits (83), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 64/127 (50%), Gaps = 19/127 (14%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
LQ+A+ +++L S + +HR ++ N ++ K+ FG A + + D +Y
Sbjct: 159 LQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA----RDMYDKE-----YY 208
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARK--PLFDCNN 294
+ ++ + LP++ + A E + +T F SD++SFG + + L+ R P D N
Sbjct: 209 SVHNKTGAKLPVK----WMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 262
Query: 295 -NVKMYM 300
++ +Y+
Sbjct: 263 FDITVYL 269
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 36.6 bits (83), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 64/127 (50%), Gaps = 19/127 (14%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
LQ+A+ +++L S + +HR ++ N ++ K+ FG A + + D +Y
Sbjct: 132 LQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA----RDMYDKE-----YY 181
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARK--PLFDCNN 294
+ ++ + LP++ + A E + +T F SD++SFG + + L+ R P D N
Sbjct: 182 SVHNKTGAKLPVK----WMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 235
Query: 295 -NVKMYM 300
++ +Y+
Sbjct: 236 FDITVYL 242
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 36.6 bits (83), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 64/127 (50%), Gaps = 19/127 (14%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
LQ+A+ +++L S + +HR ++ N ++ K+ FG A + + D +Y
Sbjct: 140 LQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA----RDMYDKE-----YY 189
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARK--PLFDCNN 294
+ ++ + LP++ + A E + +T F SD++SFG + + L+ R P D N
Sbjct: 190 SVHNKTGAKLPVK----WMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 243
Query: 295 -NVKMYM 300
++ +Y+
Sbjct: 244 FDITVYL 250
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 36.6 bits (83), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 91/234 (38%), Gaps = 31/234 (13%)
Query: 107 ADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLE 166
A+ + V LRH I+ + A +NK+ L + F+ +++ ++G+
Sbjct: 47 AEIYQTVMLRHENILGFIAA--DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI 104
Query: 167 MSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS 226
L GL + + + HR + +NIL+ NG + G A+ D A +
Sbjct: 105 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA-T 163
Query: 227 DSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTN-----SFGCSSDIFSFGCVAY 281
D+ ++ H + Y APE++ N SF +DI++ G V +
Sbjct: 164 DTIDIAPNHRV------------GTKRYMAPEVLDDSINMKHFESFK-RADIYAMGLVFW 210
Query: 282 HLIARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPT 335
+ R + + + + L Y + +PSD + + + + RP
Sbjct: 211 EIARRCSIGGIHEDYQ-----LPY-----YDLVPSDPSVEEMRKVVCEQKLRPN 254
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 91/234 (38%), Gaps = 31/234 (13%)
Query: 107 ADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLE 166
A+ + V LRH I+ + A +NK+ L + F+ +++ ++G+
Sbjct: 46 AEIYQTVMLRHENILGFIAA--DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI 103
Query: 167 MSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS 226
L GL + + + HR + +NIL+ NG + G A+ D A +
Sbjct: 104 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA-T 162
Query: 227 DSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTN-----SFGCSSDIFSFGCVAY 281
D+ ++ H + Y APE++ N SF +DI++ G V +
Sbjct: 163 DTIDIAPNHRV------------GTKRYMAPEVLDDSINMKHFESFK-RADIYAMGLVFW 209
Query: 282 HLIARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPT 335
+ R + + + + L Y + +PSD + + + + RP
Sbjct: 210 EIARRCSIGGIHEDYQ-----LPY-----YDLVPSDPSVEEMRKVVCEQKLRPN 253
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 91/234 (38%), Gaps = 31/234 (13%)
Query: 107 ADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLE 166
A+ + V LRH I+ + A +NK+ L + F+ +++ ++G+
Sbjct: 49 AEIYQTVMLRHENILGFIAA--DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI 106
Query: 167 MSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS 226
L GL + + + HR + +NIL+ NG + G A+ D A +
Sbjct: 107 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA-T 165
Query: 227 DSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTN-----SFGCSSDIFSFGCVAY 281
D+ ++ H + Y APE++ N SF +DI++ G V +
Sbjct: 166 DTIDIAPNHRV------------GTKRYMAPEVLDDSINMKHFESFK-RADIYAMGLVFW 212
Query: 282 HLIARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPT 335
+ R + + + + L Y + +PSD + + + + RP
Sbjct: 213 EIARRCSIGGIHEDYQ-----LPY-----YDLVPSDPSVEEMRKVVCEQKLRPN 256
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 64/127 (50%), Gaps = 19/127 (14%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
LQ+A+ +++L S + +HR ++ N ++ K+ FG A + + D +Y
Sbjct: 137 LQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA----RDMYDKE-----YY 186
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARK--PLFDCNN 294
+ ++ + LP++ + A E + +T F SD++SFG + + L+ R P D N
Sbjct: 187 SVHNKTGAKLPVK----WMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 240
Query: 295 -NVKMYM 300
++ +Y+
Sbjct: 241 FDITVYL 247
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 179 IAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFA--ISTDQAISDSSNVQAF 234
I ++L +L +IHR + P NIL+ G KL FG + + D+A S+ A+
Sbjct: 133 IVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAY 190
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 91/234 (38%), Gaps = 31/234 (13%)
Query: 107 ADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLE 166
A+ + V LRH I+ + A +NK+ L + F+ +++ ++G+
Sbjct: 52 AEIYQTVMLRHENILGFIAA--DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI 109
Query: 167 MSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAIS 226
L GL + + + HR + +NIL+ NG + G A+ D A +
Sbjct: 110 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA-T 168
Query: 227 DSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTN-----SFGCSSDIFSFGCVAY 281
D+ ++ H + Y APE++ N SF +DI++ G V +
Sbjct: 169 DTIDIAPNHRV------------GTKRYMAPEVLDDSINMKHFESFK-RADIYAMGLVFW 215
Query: 282 HLIARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSANESFRPT 335
+ R + + + + L Y + +PSD + + + + RP
Sbjct: 216 EIARRCSIGGIHEDYQ-----LPY-----YDLVPSDPSVEEMRKVVCEQKLRPN 259
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 20/114 (17%)
Query: 180 AESLEFLHSNA--RLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
A L +LH + ++IHR + NIL+ +G FG A D Y
Sbjct: 141 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-------------YK 187
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFD 291
+ V + ++ + + APE + + +S +D+F +G + LI + FD
Sbjct: 188 DXHVXXA---VRGXIGHIAPEYLSTGKSS--EKTDVFGYGVMLLELITGQRAFD 236
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 64/127 (50%), Gaps = 19/127 (14%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
LQ+A+ +++L S + +HR ++ N ++ K+ FG A + + D +Y
Sbjct: 140 LQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA----RDMYDKE-----YY 189
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARK--PLFDCNN 294
+ ++ + LP++ + A E + +T F SD++SFG + + L+ R P D N
Sbjct: 190 SVHNKTGAKLPVK----WMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 243
Query: 295 -NVKMYM 300
++ +Y+
Sbjct: 244 FDITVYL 250
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 36.2 bits (82), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 64/127 (50%), Gaps = 19/127 (14%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
LQ+A+ +++L S + +HR ++ N ++ K+ FG A + + D +Y
Sbjct: 139 LQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA----RDMYDKE-----YY 188
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARK--PLFDCNN 294
+ ++ + LP++ + A E + +T F SD++SFG + + L+ R P D N
Sbjct: 189 SVHNKTGAKLPVK----WMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 242
Query: 295 -NVKMYM 300
++ +Y+
Sbjct: 243 FDITVYL 249
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 36.2 bits (82), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 91/214 (42%), Gaps = 45/214 (21%)
Query: 88 RARAGLTKSAEDAFLDLVRADAGKLVRL----RHPGIVHVVQAMDENKNAMAMVTEPLFA 143
R A + + E A D R AG+L L HP I++++ A E++ + + E +A
Sbjct: 42 RMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC-EHRGYLYLAIE--YA 98
Query: 144 SVANVLGNFENVSKVPRELKGLE--------MSLLEMKHGLLQIAESLEFLHSNARLIHR 195
N+L +F S+V +S ++ H +A +++L S + IHR
Sbjct: 99 PHGNLL-DFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL-SQKQFIHR 156
Query: 196 AISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQ----PS 251
++ NIL+ N K+ FG + + + + LP++ S
Sbjct: 157 DLAARNILVGENYVAKIADFGLSRGQEVYVKKTM--------------GRLPVRWMAIES 202
Query: 252 LNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
LNY+ + +SD++S+G + + +++
Sbjct: 203 LNYSV----------YTTNSDVWSYGVLLWEIVS 226
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 36.2 bits (82), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 64/127 (50%), Gaps = 19/127 (14%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
LQ+A+ +++L S + +HR ++ N ++ K+ FG A + + D +Y
Sbjct: 135 LQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA----RDMYDKE-----YY 184
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARK--PLFDCNN 294
+ ++ + LP++ + A E + +T F SD++SFG + + L+ R P D N
Sbjct: 185 SVHNKTGAKLPVK----WMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 238
Query: 295 -NVKMYM 300
++ +Y+
Sbjct: 239 FDITVYL 245
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 36.2 bits (82), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 64/127 (50%), Gaps = 19/127 (14%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
LQ+A+ +++L S + +HR ++ N ++ K+ FG A + + D +Y
Sbjct: 138 LQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA----RDMYDKE-----YY 187
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARK--PLFDCNN 294
+ ++ + LP++ + A E + +T F SD++SFG + + L+ R P D N
Sbjct: 188 SVHNKTGAKLPVK----WMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 241
Query: 295 -NVKMYM 300
++ +Y+
Sbjct: 242 FDITVYL 248
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 91/214 (42%), Gaps = 45/214 (21%)
Query: 88 RARAGLTKSAEDAFLDLVRADAGKLVRL----RHPGIVHVVQAMDENKNAMAMVTEPLFA 143
R A + + E A D R AG+L L HP I++++ A E++ + + E +A
Sbjct: 52 RMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC-EHRGYLYLAIE--YA 108
Query: 144 SVANVLGNFENVSKVPRELKGLE--------MSLLEMKHGLLQIAESLEFLHSNARLIHR 195
N+L +F S+V +S ++ H +A +++L S + IHR
Sbjct: 109 PHGNLL-DFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL-SQKQFIHR 166
Query: 196 AISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQ----PS 251
++ NIL+ N K+ FG + + + + LP++ S
Sbjct: 167 DLAARNILVGENYVAKIADFGLSRGQEVYVKKTM--------------GRLPVRWMAIES 212
Query: 252 LNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
LNY+ + +SD++S+G + + +++
Sbjct: 213 LNYSV----------YTTNSDVWSYGVLLWEIVS 236
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 35.8 bits (81), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 179 IAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAE 238
IA + +LHS +IHR ++ N L+ N + FG A + + + + +
Sbjct: 117 IASGMAYLHS-MNIIHRDLNSHNCLVRENKNVVVADFGLA---RLMVDEKTQPEGLRSLK 172
Query: 239 YDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIAR 286
+ + + APE++ + S+ D+FSFG V +I R
Sbjct: 173 KPDRKKRYTVVGNPYWMAPEMINGR--SYDEKVDVFSFGIVLCEIIGR 218
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 35.8 bits (81), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 91/214 (42%), Gaps = 45/214 (21%)
Query: 88 RARAGLTKSAEDAFLDLVRADAGKLVRL----RHPGIVHVVQAMDENKNAMAMVTEPLFA 143
R A + + E A D R AG+L L HP I++++ A E++ + + E +A
Sbjct: 49 RMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC-EHRGYLYLAIE--YA 105
Query: 144 SVANVLGNFENVSKVPRELKGLE--------MSLLEMKHGLLQIAESLEFLHSNARLIHR 195
N+L +F S+V +S ++ H +A +++L S + IHR
Sbjct: 106 PHGNLL-DFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL-SQKQFIHR 163
Query: 196 AISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQ----PS 251
++ NIL+ N K+ FG + + + + LP++ S
Sbjct: 164 NLAARNILVGENYVAKIADFGLSRGQEVYVKKTM--------------GRLPVRWMAIES 209
Query: 252 LNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
LNY+ + +SD++S+G + + +++
Sbjct: 210 LNYSV----------YTTNSDVWSYGVLLWEIVS 233
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 21/113 (18%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
+I L+FLHS +++R + +NIL+ +G K+ FG + + + D+
Sbjct: 126 EIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFG--MCKENMLGDAKTNX----- 177
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYH-LIARKPL 289
+ +Y APE++ + + S D +SFG + Y LI + P
Sbjct: 178 ----------FCGTPDYIAPEILLGQ--KYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 22/117 (18%)
Query: 169 LLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDS 228
LLEM + E++E+L S + +HR ++ N L+ G K+ FG +
Sbjct: 122 LLEM---CKDVCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLS---------- 167
Query: 229 SNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
Y D E S + + + ++ PE++ + F SDI++FG + + + +
Sbjct: 168 ------RYVLDDEETSSVGSKFPVRWSPPEVLM--YSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 57/140 (40%), Gaps = 27/140 (19%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
+I +L FLH +I+R + +N+L+ G KL FG + I + F
Sbjct: 132 EIISALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMC---KEGICNGVTTATF--- 184
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNVK 297
+ +Y APE+++ +G + D ++ G + Y ++ F+ N
Sbjct: 185 -----------CGTPDYIAPEILQEML--YGPAVDWWAMGVLLYEMLCGHAPFEAENEDD 231
Query: 298 MYMNTL-------TYLSSDA 310
++ L T+L DA
Sbjct: 232 LFEAILNDEVVYPTWLHEDA 251
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 23/113 (20%)
Query: 185 FLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDS 244
F+H + +IHR + P N L+ + + K+ FG A T + D++ V D+E++
Sbjct: 144 FIHESG-IIHRDLKPANCLLNQDCSVKVCDFGLA-RTINSEKDTNIVN-------DLEEN 194
Query: 245 MLP------LQPSLN-------YTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
P L+ L Y APEL+ + N + S DI+S GC+ L+
Sbjct: 195 EEPGPHNKNLKKQLTSHVVTRWYRAPELILLQEN-YTKSIDIWSTGCIFAELL 246
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 21/130 (16%)
Query: 159 PRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAW---KLGGF 215
PR + +++L++ H IA ++L N IHR I+ N L+T G K+G F
Sbjct: 130 PRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGDF 188
Query: 216 GFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFS 275
G A Q I +S + A MLP++ + PE F +D +S
Sbjct: 189 GMA----QDIYRASYYRKGGCA-------MLPVK----WMPPEAFMEGI--FTSKTDTWS 231
Query: 276 FGCVAYHLIA 285
FG + + + +
Sbjct: 232 FGVLLWEIFS 241
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 184 EFLHSNARLIHRAISPENILITSNGAWKLGGFGFA--ISTDQAISDSSNVQAFHYA---- 237
+F+H + +IHR + P N L+ + + K+ FG A I++D+ I ++++
Sbjct: 145 KFIHESG-IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPG 203
Query: 238 --EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
+++ + + Y APEL+ + N + S DI+S GC+ L+
Sbjct: 204 PHNKNLKKQLTSHVVTRWYRAPELILLQEN-YTNSIDIWSTGCIFAELL 251
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 126/319 (39%), Gaps = 57/319 (17%)
Query: 37 QDYELLDQIGSAGPGLAWKLYSARARDVTRQQAQYPMVCVWVLDKRALSEARARAGLTKS 96
Q Y + +GS G W +A ++ ++ +V ++ ++ L +
Sbjct: 24 QKYSTMSPLGSGAFGFVW---TAVDKEKNKE-----VVVKFIKKEKVLEDCWI------- 68
Query: 97 AEDAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVS 156
ED L V + L R+ H I+ V+ EN+ +V E + L F +
Sbjct: 69 -EDPKLGKVTLEIAILSRVEHANIIKVLDIF-ENQGFFQLVME----KHGSGLDLFAFID 122
Query: 157 KVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFG 216
+ PR + L + Q+ ++ +L +IHR I ENI+I + KL FG
Sbjct: 123 RHPRLDEPLASYIFR------QLVSAVGYLRLK-DIIHRDIKDENIVIAEDFTIKLIDFG 175
Query: 217 FAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSF 276
A ++ + F+ ++ Y APE++ G +++S
Sbjct: 176 SAAYLERG-------KLFY-----------TFCGTIEYCAPEVLMGNPYR-GPELEMWSL 216
Query: 277 GCVAYHLIARK-PLFDCNNNVKMYMNTLTYLSSDAFSSIPSDL---VPD----LQKMLSA 328
G Y L+ + P + V+ ++ YL S S+ S L VP+ L+K+++
Sbjct: 217 GVTLYTLVFEENPFCELEETVEAAIHP-PYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275
Query: 329 NESFRPTAM-DFTGSRFFR 346
+P + D+T FR
Sbjct: 276 PWVTQPVNLADYTWEEVFR 294
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+QIA+ + +L + RL+HR ++ N+L+ + K+ FG A +
Sbjct: 158 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLA-----------KLLGAEE 205
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
EY E +P++ + A E + + + SD++S+G + L+
Sbjct: 206 KEYHAEGGKVPIK----WMALESILHRIYTH--QSDVWSYGVTVWELM 247
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 19/127 (14%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
LQ+A+ ++FL S + +HR ++ N ++ K+ FG A + +
Sbjct: 138 LQVAKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA-------------RDMYD 183
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARK--PLFDCNN 294
E+D + + + + A E + +T F SD++SFG + + L+ R P D N
Sbjct: 184 KEFDSVHNKTGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 241
Query: 295 -NVKMYM 300
++ +Y+
Sbjct: 242 FDITVYL 248
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 19/127 (14%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
LQ+A+ ++FL S + +HR ++ N ++ K+ FG A + +
Sbjct: 199 LQVAKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA-------------RDMYD 244
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARK--PLFDCNN 294
E+D + + + + A E + +T F SD++SFG + + L+ R P D N
Sbjct: 245 KEFDSVHNKTGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 302
Query: 295 -NVKMYM 300
++ +Y+
Sbjct: 303 FDITVYL 309
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 18/108 (16%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+A + +L S + +HR ++ N L+ N K+ FG S N+ + Y
Sbjct: 182 QVAAGMAYL-SERKFVHRDLATRNCLVGENMVVKIADFGL----------SRNIYSADYY 230
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
+ D D++ + + PE + N + SD++++G V + + +
Sbjct: 231 KADGNDAI-----PIRWMPPESI--FYNRYTTESDVWAYGVVLWEIFS 271
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+QIA+ + +L + RL+HR ++ N+L+ + K+ FG A +
Sbjct: 134 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLA-----------KLLGAEE 181
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
EY E +P++ + A E + + + SD++S+G + L+
Sbjct: 182 KEYHAEGGKVPIK----WMALESILHRIYTH--QSDVWSYGVTVWELM 223
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 19/127 (14%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
LQ+A+ ++FL S + +HR ++ N ++ K+ FG A + +
Sbjct: 140 LQVAKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA-------------RDMYD 185
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARK--PLFDCNN 294
E+D + + + + A E + +T F SD++SFG + + L+ R P D N
Sbjct: 186 KEFDSVHNKTGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 243
Query: 295 -NVKMYM 300
++ +Y+
Sbjct: 244 FDITVYL 250
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 19/127 (14%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
LQ+A+ ++FL S + +HR ++ N ++ K+ FG A + +
Sbjct: 140 LQVAKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA-------------RDMYD 185
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARK--PLFDCNN 294
E+D + + + + A E + +T F SD++SFG + + L+ R P D N
Sbjct: 186 KEFDSVHNKTGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 243
Query: 295 -NVKMYM 300
++ +Y+
Sbjct: 244 FDITVYL 250
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 19/127 (14%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
LQ+A+ ++FL S + +HR ++ N ++ K+ FG A + +
Sbjct: 141 LQVAKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA-------------RDMYD 186
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARK--PLFDCNN 294
E+D + + + + A E + +T F SD++SFG + + L+ R P D N
Sbjct: 187 KEFDSVHNKTGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 244
Query: 295 -NVKMYM 300
++ +Y+
Sbjct: 245 FDITVYL 251
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 68/153 (44%), Gaps = 19/153 (12%)
Query: 176 LLQIAESLEFLHS-NARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAF 234
+L IA +E++ + N ++HR + NI F S D+ + V F
Sbjct: 128 MLDIALGIEYMQNQNPPIVHRDLRSPNI--------------FLQSLDENAPVCAKVADF 173
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNN 294
++ V S+ L + + APE + ++ S+ +D +SF + Y ++ + FD +
Sbjct: 174 GLSQQSVH-SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS 232
Query: 295 NVKM-YMNTLTYLSSDAFSSIPSDLVPDLQKML 326
K+ ++N + +IP D P L+ ++
Sbjct: 233 YGKIKFINMIR--EEGLRPTIPEDCPPRLRNVI 263
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+QIA+ + +L + RL+HR ++ N+L+ + K+ FG A +
Sbjct: 127 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLA-----------KLLGAEE 174
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
EY E +P++ + A E + + + SD++S+G + L+
Sbjct: 175 KEYHAEGGKVPIK----WMALESILHRIYTH--QSDVWSYGVTVWELM 216
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+QIA+ + +L + RL+HR ++ N+L+ + K+ FG A +
Sbjct: 124 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLA-----------KLLGAEE 171
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
EY E +P++ + A E + + + SD++S+G + L+
Sbjct: 172 KEYHAEGGKVPIK----WMALESILHRIYTH--QSDVWSYGVTVWELM 213
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+QIA+ + +L + RL+HR ++ N+L+ + K+ FG A +
Sbjct: 124 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLA-----------KLLGAEE 171
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
EY E +P++ + A E + + + SD++S+G + L+
Sbjct: 172 KEYHAEGGKVPIK----WMALESILHRIYTH--QSDVWSYGVTVWELM 213
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+QIA+ + +L + RL+HR ++ N+L+ + K+ FG A +
Sbjct: 127 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLA-----------KLLGAEE 174
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
EY E +P++ + A E + + + SD++S+G + L+
Sbjct: 175 KEYHAEGGKVPIK----WMALESILHRIYTH--QSDVWSYGVTVWELM 216
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+QIA+ + +L + RL+HR ++ N+L+ + K+ FG A +
Sbjct: 126 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLA-----------KLLGAEE 173
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
EY E +P++ + A E + + + SD++S+G + L+
Sbjct: 174 KEYHAEGGKVPIK----WMALESILHRIYTH--QSDVWSYGVTVWELM 215
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 19/127 (14%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
LQ+A+ ++FL S + +HR ++ N ++ K+ FG A + +
Sbjct: 145 LQVAKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA-------------RDMYD 190
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARK--PLFDCNN 294
E+D + + + + A E + +T F SD++SFG + + L+ R P D N
Sbjct: 191 KEFDSVHNKTGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 248
Query: 295 -NVKMYM 300
++ +Y+
Sbjct: 249 FDITVYL 255
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+QIA+ + +L + RL+HR ++ N+L+ + K+ FG A +
Sbjct: 127 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLA-----------KLLGAEE 174
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
EY E +P++ + A E + + + SD++S+G + L+
Sbjct: 175 KEYHAEGGKVPIK----WMALESILHRIYTH--QSDVWSYGVTVWELM 216
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 21/130 (16%)
Query: 159 PRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAW---KLGGF 215
PR + +++L++ H IA ++L N IHR I+ N L+T G K+G F
Sbjct: 130 PRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGDF 188
Query: 216 GFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFS 275
G A +A +Y + +MLP++ + PE F +D +S
Sbjct: 189 GMARDI---------YRASYYRKGGC--AMLPVK----WMPPEAFMEGI--FTSKTDTWS 231
Query: 276 FGCVAYHLIA 285
FG + + + +
Sbjct: 232 FGVLLWEIFS 241
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+QIA+ + +L + RL+HR ++ N+L+ + K+ FG A +
Sbjct: 124 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLA-----------KLLGAEE 171
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
EY E +P++ + A E + + + SD++S+G + L+
Sbjct: 172 KEYHAEGGKVPIK----WMALESILHRI--YTHQSDVWSYGVTVWELM 213
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+QIA+ + +L + RL+HR ++ N+L+ + K+ FG A +
Sbjct: 124 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLA-----------KLLGAEE 171
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
EY E +P++ + A E + + + SD++S+G + L+
Sbjct: 172 KEYHAEGGKVPIK----WMALESILHRIYTH--QSDVWSYGVTVWELM 213
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+QIA+ + +L + RL+HR ++ N+L+ + K+ FG A +
Sbjct: 126 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLA-----------KLLGAEE 173
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
EY E +P++ + A E + + + SD++S+G + L+
Sbjct: 174 KEYHAEGGKVPIK----WMALESILHRIYTH--QSDVWSYGVTVWELM 215
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 68/153 (44%), Gaps = 19/153 (12%)
Query: 176 LLQIAESLEFLHS-NARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAF 234
+L IA +E++ + N ++HR + NI F S D+ + V F
Sbjct: 128 MLDIALGIEYMQNQNPPIVHRDLRSPNI--------------FLQSLDENAPVCAKVADF 173
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNN 294
++ V S+ L + + APE + ++ S+ +D +SF + Y ++ + FD +
Sbjct: 174 SLSQQSVH-SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS 232
Query: 295 NVKM-YMNTLTYLSSDAFSSIPSDLVPDLQKML 326
K+ ++N + +IP D P L+ ++
Sbjct: 233 YGKIKFINMIR--EEGLRPTIPEDCPPRLRNVI 263
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+QIA+ + +L + RL+HR ++ N+L+ + K+ FG A +
Sbjct: 118 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLA-----------KLLGAEE 165
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
EY E +P++ + A E + + + SD++S+G + L+
Sbjct: 166 KEYHAEGGKVPIK----WMALESILHRIYTH--QSDVWSYGVTVWELM 207
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+QIA+ + +L + RL+HR ++ N+L+ + K+ FG A +
Sbjct: 125 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLA-----------KLLGAEE 172
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
EY E +P++ + A E + + + SD++S+G + L+
Sbjct: 173 KEYHAEGGKVPIK----WMALESILHRIYTH--QSDVWSYGVTVWELM 214
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+QIA+ + +L + RL+HR ++ N+L+ + K+ FG A +
Sbjct: 124 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLA-----------KLLGAEE 171
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
EY E +P++ + A E + + + SD++S+G + L+
Sbjct: 172 KEYHAEGGKVPIK----WMALESILHRIYTH--QSDVWSYGVTVWELM 213
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+QIA+ + +L + RL+HR ++ N+L+ + K+ FG A +
Sbjct: 131 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLA-----------KLLGAEE 178
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
EY E +P++ + A E + + + SD++S+G + L+
Sbjct: 179 KEYHAEGGKVPIK----WMALESILHRIYTH--QSDVWSYGVTVWELM 220
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+QIA+ + +L + RL+HR ++ N+L+ + K+ FG A +
Sbjct: 131 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLA-----------KLLGAEE 178
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
EY E +P++ + A E + + + SD++S+G + L+
Sbjct: 179 KEYHAEGGKVPIK----WMALESILHRIYTH--QSDVWSYGVTVWELM 220
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+QIA+ + +L + RL+HR ++ N+L+ + K+ FG A +
Sbjct: 130 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLA-----------KLLGAEE 177
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
EY E +P++ + A E + + + SD++S+G + L+
Sbjct: 178 KEYHAEGGKVPIK----WMALESILHRIYTH--QSDVWSYGVTVWELM 219
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+QIA+ + +L + RL+HR ++ N+L+ + K+ FG A +
Sbjct: 131 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLA-----------KLLGAEE 178
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
EY E +P++ + A E + + + SD++S+G + L+
Sbjct: 179 KEYHAEGGKVPIK----WMALESILHRIYTH--QSDVWSYGVTVWELM 220
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+QIA+ + +L + RL+HR ++ N+L+ + K+ FG A +
Sbjct: 128 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLA-----------KLLGAEE 175
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
EY E +P++ + A E + + + SD++S+G + L+
Sbjct: 176 KEYHAEGGKVPIK----WMALESILHRIYTH--QSDVWSYGVTVWELM 217
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+QIA+ + +L + RL+HR ++ N+L+ + K+ FG A +
Sbjct: 125 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLA-----------KLLGAEE 172
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
EY E +P++ + A E + + + SD++S+G + L+
Sbjct: 173 KEYHAEGGKVPIK----WMALESILHRIYTH--QSDVWSYGVTVWELM 214
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 22/137 (16%)
Query: 160 RELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILI---TSNGAWKLGGFG 216
R LE S++ + +A +L+FLH N + HR + PENIL K+ FG
Sbjct: 106 RHFNELEASVV-----VQDVASALDFLH-NKGIAHRDLKPENILCEHPNQVSPVKICDFG 159
Query: 217 FAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRS---KTNSFGCSSDI 273
S + D S + +L S Y APE+V + + + + D+
Sbjct: 160 LG-SGIKLNGDCSPIST---------PELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDL 209
Query: 274 FSFGCVAYHLIARKPLF 290
+S G + Y L++ P F
Sbjct: 210 WSLGVILYILLSGYPPF 226
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+QIA+ + +L + RL+HR ++ N+L+ + K+ FG A +
Sbjct: 127 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLA-----------KLLGAEE 174
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
EY E +P++ + A E + + + SD++S+G + L+
Sbjct: 175 KEYHAEGGKVPIK----WMALESILHRIYTH--QSDVWSYGVTVWELM 216
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 21/130 (16%)
Query: 159 PRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAW---KLGGF 215
PR + +++L++ H IA ++L N IHR I+ N L+T G K+G F
Sbjct: 130 PRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGDF 188
Query: 216 GFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFS 275
G A +A +Y + +MLP++ + PE F +D +S
Sbjct: 189 GMARDI---------YRASYYRKGGC--AMLPVK----WMPPEAFMEGI--FTSKTDTWS 231
Query: 276 FGCVAYHLIA 285
FG + + + +
Sbjct: 232 FGVLLWEIFS 241
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 21/130 (16%)
Query: 159 PRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAW---KLGGF 215
PR + +++L++ H IA ++L N IHR I+ N L+T G K+G F
Sbjct: 156 PRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGDF 214
Query: 216 GFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFS 275
G A +A +Y + +MLP++ + PE F +D +S
Sbjct: 215 GMARDI---------YRASYYRKGGC--AMLPVK----WMPPEAFMEGI--FTSKTDTWS 257
Query: 276 FGCVAYHLIA 285
FG + + + +
Sbjct: 258 FGVLLWEIFS 267
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 68/153 (44%), Gaps = 19/153 (12%)
Query: 176 LLQIAESLEFLHS-NARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAF 234
+L IA +E++ + N ++HR + NI F S D+ + V F
Sbjct: 128 MLDIALGIEYMQNQNPPIVHRDLRSPNI--------------FLQSLDENAPVCAKVADF 173
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNN 294
++ V S+ L + + APE + ++ S+ +D +SF + Y ++ + FD +
Sbjct: 174 GTSQQSVH-SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS 232
Query: 295 NVKM-YMNTLTYLSSDAFSSIPSDLVPDLQKML 326
K+ ++N + +IP D P L+ ++
Sbjct: 233 YGKIKFINMIR--EEGLRPTIPEDCPPRLRNVI 263
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 21/130 (16%)
Query: 159 PRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAW---KLGGF 215
PR + +++L++ H IA ++L N IHR I+ N L+T G K+G F
Sbjct: 129 PRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGDF 187
Query: 216 GFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFS 275
G A +A +Y + +MLP++ + PE F +D +S
Sbjct: 188 GMARDI---------YRASYYRKGGC--AMLPVK----WMPPEAFMEGI--FTSKTDTWS 230
Query: 276 FGCVAYHLIA 285
FG + + + +
Sbjct: 231 FGVLLWEIFS 240
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 21/130 (16%)
Query: 159 PRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAW---KLGGF 215
PR + +++L++ H IA ++L N IHR I+ N L+T G K+G F
Sbjct: 146 PRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGDF 204
Query: 216 GFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFS 275
G A +A +Y + +MLP++ + PE F +D +S
Sbjct: 205 GMARDI---------YRASYYRKGGC--AMLPVK----WMPPEAFMEGI--FTSKTDTWS 247
Query: 276 FGCVAYHLIA 285
FG + + + +
Sbjct: 248 FGVLLWEIFS 257
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 21/130 (16%)
Query: 159 PRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAW---KLGGF 215
PR + +++L++ H IA ++L N IHR I+ N L+T G K+G F
Sbjct: 129 PRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGDF 187
Query: 216 GFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFS 275
G A +A +Y + +MLP++ + PE F +D +S
Sbjct: 188 GMARDI---------YRASYYRKGGC--AMLPVK----WMPPEAFMEGI--FTSKTDTWS 230
Query: 276 FGCVAYHLIA 285
FG + + + +
Sbjct: 231 FGVLLWEIFS 240
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 21/130 (16%)
Query: 159 PRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAW---KLGGF 215
PR + +++L++ H IA ++L N IHR I+ N L+T G K+G F
Sbjct: 136 PRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGDF 194
Query: 216 GFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFS 275
G A +A +Y + +MLP++ + PE F +D +S
Sbjct: 195 GMARDI---------YRASYYRKGGC--AMLPVK----WMPPEAFMEGI--FTSKTDTWS 237
Query: 276 FGCVAYHLIA 285
FG + + + +
Sbjct: 238 FGVLLWEIFS 247
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+QIA+ + +L + RL+HR ++ N+L+ + K+ FG A +
Sbjct: 149 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLA-----------KLLGAEE 196
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
EY E +P++ + A E + + + SD++S+G + L+
Sbjct: 197 KEYHAEGGKVPIK----WMALESILHRIYTH--QSDVWSYGVTVWELM 238
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 21/130 (16%)
Query: 159 PRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAW---KLGGF 215
PR + +++L++ H IA ++L N IHR I+ N L+T G K+G F
Sbjct: 147 PRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGDF 205
Query: 216 GFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFS 275
G A +A +Y + +MLP++ + PE F +D +S
Sbjct: 206 GMARDI---------YRAGYYRKGGC--AMLPVK----WMPPEAFMEGI--FTSKTDTWS 248
Query: 276 FGCVAYHLIA 285
FG + + + +
Sbjct: 249 FGVLLWEIFS 258
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 21/130 (16%)
Query: 159 PRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAW---KLGGF 215
PR + +++L++ H IA ++L N IHR I+ N L+T G K+G F
Sbjct: 170 PRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGDF 228
Query: 216 GFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFS 275
G A +A +Y + +MLP++ + PE F +D +S
Sbjct: 229 GMARDI---------YRAGYYRKGGC--AMLPVK----WMPPEAFMEGI--FTSKTDTWS 271
Query: 276 FGCVAYHLIA 285
FG + + + +
Sbjct: 272 FGVLLWEIFS 281
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 21/130 (16%)
Query: 159 PRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAW---KLGGF 215
PR + +++L++ H IA ++L N IHR I+ N L+T G K+G F
Sbjct: 121 PRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGDF 179
Query: 216 GFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFS 275
G A +A +Y + +MLP++ + PE F +D +S
Sbjct: 180 GMARDI---------YRASYYRKGGC--AMLPVK----WMPPEAFMEGI--FTSKTDTWS 222
Query: 276 FGCVAYHLIA 285
FG + + + +
Sbjct: 223 FGVLLWEIFS 232
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 21/130 (16%)
Query: 159 PRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAW---KLGGF 215
PR + +++L++ H IA ++L N IHR I+ N L+T G K+G F
Sbjct: 144 PRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGDF 202
Query: 216 GFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFS 275
G A +A +Y + +MLP++ + PE F +D +S
Sbjct: 203 GMARDI---------YRASYYRKGGC--AMLPVK----WMPPEAFMEGI--FTSKTDTWS 245
Query: 276 FGCVAYHLIA 285
FG + + + +
Sbjct: 246 FGVLLWEIFS 255
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 21/130 (16%)
Query: 159 PRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAW---KLGGF 215
PR + +++L++ H IA ++L N IHR I+ N L+T G K+G F
Sbjct: 144 PRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGDF 202
Query: 216 GFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFS 275
G A +A +Y + +MLP++ + PE F +D +S
Sbjct: 203 GMARDI---------YRASYYRKGGC--AMLPVK----WMPPEAFMEGI--FTSKTDTWS 245
Query: 276 FGCVAYHLIA 285
FG + + + +
Sbjct: 246 FGVLLWEIFS 255
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 21/130 (16%)
Query: 159 PRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAW---KLGGF 215
PR + +++L++ H IA ++L N IHR I+ N L+T G K+G F
Sbjct: 144 PRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGDF 202
Query: 216 GFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFS 275
G A +A +Y + +MLP++ + PE F +D +S
Sbjct: 203 GMARDI---------YRASYYRKGGC--AMLPVK----WMPPEAFMEGI--FTSKTDTWS 245
Query: 276 FGCVAYHLIA 285
FG + + + +
Sbjct: 246 FGVLLWEIFS 255
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 80/192 (41%), Gaps = 42/192 (21%)
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKV 158
+AFL +A + +LRH +V + + E EP++ ++G + + +
Sbjct: 224 EAFLQ----EAQVMKKLRHEKLVQLYAVVSE---------EPIY-----IVGEYMSKGSL 265
Query: 159 PRELKGLEMSLLEMKHGL---LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGF 215
LKG L + + QIA + ++ +HR + NIL+ N K+ F
Sbjct: 266 LDFLKGETGKYLRLPQLVDMAAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADF 324
Query: 216 GFAISTDQAISDSSNVQAFHYAEYDV-EDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIF 274
G A + I D+ EY + + P++ +TAPE + F SD++
Sbjct: 325 GLA----RLIEDN---------EYTARQGAKFPIK----WTAPEA--ALYGRFTIKSDVW 365
Query: 275 SFGCVAYHLIAR 286
SFG + L +
Sbjct: 366 SFGILLTELTTK 377
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 19/127 (14%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
LQ+A+ ++FL S + +HR ++ N ++ K+ FG A DS
Sbjct: 141 LQVAKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSV------- 192
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARK--PLFDCNN 294
++ + LP++ + A E + +T F SD++SFG + + L+ R P D N
Sbjct: 193 --HNKTGAKLPVK----WMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 244
Query: 295 -NVKMYM 300
++ +Y+
Sbjct: 245 FDITVYL 251
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 34.3 bits (77), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 29/107 (27%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QIAE + F+ IHR + NIL++++ K+ FG A V A
Sbjct: 286 QIAEGMAFIEQR-NYIHRDLRAANILVSASLVCKIADFGLA-----------RVGA---- 329
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
P++ +TAPE + SF SD++SFG + ++
Sbjct: 330 -------KFPIK----WTAPEAI--NFGSFTIKSDVWSFGILLMEIV 363
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 24/123 (19%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSN-GAWKLGGFG-FAISTDQAISDSSNVQA 233
Q+ E++ H N ++HR I ENILI N G KL FG A+ D +D +
Sbjct: 121 FWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 179
Query: 234 FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCN 293
Y+ PE +R G S+ ++S G + Y ++ F+ +
Sbjct: 180 --------------------YSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHD 218
Query: 294 NNV 296
+
Sbjct: 219 EEI 221
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 24/123 (19%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSN-GAWKLGGFG-FAISTDQAISDSSNVQA 233
Q+ E++ H N ++HR I ENILI N G KL FG A+ D +D +
Sbjct: 163 FWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 221
Query: 234 FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCN 293
Y+ PE +R G S+ ++S G + Y ++ F+ +
Sbjct: 222 --------------------YSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHD 260
Query: 294 NNV 296
+
Sbjct: 261 EEI 263
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 24/123 (19%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSN-GAWKLGGFG-FAISTDQAISDSSNVQA 233
Q+ E++ H N ++HR I ENILI N G KL FG A+ D +D +
Sbjct: 120 FWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 178
Query: 234 FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCN 293
Y+ PE +R G S+ ++S G + Y ++ F+ +
Sbjct: 179 --------------------YSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHD 217
Query: 294 NNV 296
+
Sbjct: 218 EEI 220
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 24/123 (19%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSN-GAWKLGGFG-FAISTDQAISDSSNVQA 233
Q+ E++ H N ++HR I ENILI N G KL FG A+ D +D +
Sbjct: 143 FWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 201
Query: 234 FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCN 293
Y+ PE +R G S+ ++S G + Y ++ F+ +
Sbjct: 202 --------------------YSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHD 240
Query: 294 NNV 296
+
Sbjct: 241 EEI 243
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 33.9 bits (76), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 24/123 (19%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSN-GAWKLGGFG-FAISTDQAISDSSNVQA 233
Q+ E++ H N ++HR I ENILI N G KL FG A+ D +D +
Sbjct: 121 FWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 179
Query: 234 FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCN 293
Y+ PE +R G S+ ++S G + Y ++ F+ +
Sbjct: 180 --------------------YSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHD 218
Query: 294 NNV 296
+
Sbjct: 219 EEI 221
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 24/123 (19%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSN-GAWKLGGFG-FAISTDQAISDSSNVQA 233
Q+ E++ H N ++HR I ENILI N G KL FG A+ D +D +
Sbjct: 120 FWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 178
Query: 234 FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCN 293
Y+ PE +R G S+ ++S G + Y ++ F+ +
Sbjct: 179 --------------------YSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHD 217
Query: 294 NNV 296
+
Sbjct: 218 EEI 220
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 33.9 bits (76), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 24/123 (19%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSN-GAWKLGGFG-FAISTDQAISDSSNVQA 233
Q+ E++ H N ++HR I ENILI N G KL FG A+ D +D +
Sbjct: 135 FWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 193
Query: 234 FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCN 293
Y+ PE +R G S+ ++S G + Y ++ F+ +
Sbjct: 194 --------------------YSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHD 232
Query: 294 NNV 296
+
Sbjct: 233 EEI 235
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 24/123 (19%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSN-GAWKLGGFG-FAISTDQAISDSSNVQA 233
Q+ E++ H N ++HR I ENILI N G KL FG A+ D +D +
Sbjct: 135 FWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 193
Query: 234 FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCN 293
Y+ PE +R G S+ ++S G + Y ++ F+ +
Sbjct: 194 --------------------YSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHD 232
Query: 294 NNV 296
+
Sbjct: 233 EEI 235
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 24/123 (19%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSN-GAWKLGGFG-FAISTDQAISDSSNVQA 233
Q+ E++ H N ++HR I ENILI N G KL FG A+ D +D +
Sbjct: 163 FWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 221
Query: 234 FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCN 293
Y+ PE +R G S+ ++S G + Y ++ F+ +
Sbjct: 222 --------------------YSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHD 260
Query: 294 NNV 296
+
Sbjct: 261 EEI 263
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 24/123 (19%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSN-GAWKLGGFG-FAISTDQAISDSSNVQA 233
Q+ E++ H N ++HR I ENILI N G KL FG A+ D +D +
Sbjct: 168 FWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 226
Query: 234 FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCN 293
Y+ PE +R G S+ ++S G + Y ++ F+ +
Sbjct: 227 --------------------YSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHD 265
Query: 294 NNV 296
+
Sbjct: 266 EEI 268
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 24/123 (19%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSN-GAWKLGGFG-FAISTDQAISDSSNVQA 233
Q+ E++ H N ++HR I ENILI N G KL FG A+ D +D +
Sbjct: 148 FWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 206
Query: 234 FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCN 293
Y+ PE +R G S+ ++S G + Y ++ F+ +
Sbjct: 207 --------------------YSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHD 245
Query: 294 NNV 296
+
Sbjct: 246 EEI 248
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+QIA+ + +L + RL+HR ++ N+L+ + K+ FG A +
Sbjct: 131 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGRA-----------KLLGAEE 178
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
EY E +P++ + A E + + + SD++S+G + L+
Sbjct: 179 KEYHAEGGKVPIK----WMALESILHRIYTH--QSDVWSYGVTVWELM 220
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 16/110 (14%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAW-KLGGFGFAISTDQAISDSSNVQAF 234
L Q E LE+LHS R++H + +N+L++S+G+ L FG A+ + ++
Sbjct: 191 LGQALEGLEYLHSR-RILHGDVKADNVLLSSDGSHAALCDFGHAV----CLQPDGLGKSL 245
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
+Y + + + APE+V + S D++S C+ H++
Sbjct: 246 LTGDY--------IPGTETHMAPEVVLGR--SCDAKVDVWSSCCMMLHML 285
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 24/123 (19%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSN-GAWKLGGFG-FAISTDQAISDSSNVQA 233
Q+ E++ H N ++HR I ENILI N G KL FG A+ D +D +
Sbjct: 136 FWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 194
Query: 234 FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCN 293
Y+ PE +R G S+ ++S G + Y ++ F+ +
Sbjct: 195 --------------------YSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHD 233
Query: 294 NNV 296
+
Sbjct: 234 EEI 236
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 24/123 (19%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSN-GAWKLGGFG-FAISTDQAISDSSNVQA 233
Q+ E++ H N ++HR I ENILI N G KL FG A+ D +D +
Sbjct: 148 FWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 206
Query: 234 FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCN 293
Y+ PE +R G S+ ++S G + Y ++ F+ +
Sbjct: 207 --------------------YSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHD 245
Query: 294 NNV 296
+
Sbjct: 246 EEI 248
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 33.5 bits (75), Expect = 0.47, Method: Composition-based stats.
Identities = 41/199 (20%), Positives = 87/199 (43%), Gaps = 33/199 (16%)
Query: 93 LTKSAED-AFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGN 151
L A D A D + A+A + +L +P IV ++ + + M L G
Sbjct: 46 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAEL--------GP 97
Query: 152 FENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWK 211
+ R +K + +++E+ H Q++ +++L + +HR ++ N+L+ + K
Sbjct: 98 LNKYLQQNRHVK--DKNIIELVH---QVSMGMKYLEE-SNFVHRDLAARNVLLVTQHYAK 151
Query: 212 LGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS 271
+ FG + + +D + +A + ++ V+ + APE + F S
Sbjct: 152 ISDFGLSKALR---ADENXYKAQTHGKWPVK-----------WYAPECI--NYYKFSSKS 195
Query: 272 DIFSFGCVAYHLIA--RKP 288
D++SFG + + + +KP
Sbjct: 196 DVWSFGVLMWEAFSYGQKP 214
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+QIA+ + +L + RL+HR ++ N+L+ + K+ FG A +
Sbjct: 124 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGRA-----------KLLGAEE 171
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
EY E +P++ + A E + + + SD++S+G + L+
Sbjct: 172 KEYHAEGGKVPIK----WMALESILHRIYTH--QSDVWSYGVTVWELM 213
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+QIA+ + +L + RL+HR ++ N+L+ + K+ FG A +
Sbjct: 126 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGRA-----------KLLGAEE 173
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
EY E +P++ + A E + + + SD++S+G + L+
Sbjct: 174 KEYHAEGGKVPIK----WMALESILHRIYTH--QSDVWSYGVTVWELM 215
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+QIA+ + +L + RL+HR ++ N+L+ + K+ FG A +
Sbjct: 128 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGRA-----------KLLGAEE 175
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
EY E +P++ + A E + + + SD++S+G + L+
Sbjct: 176 KEYHAEGGKVPIK----WMALESILHRIYTH--QSDVWSYGVTVWELM 217
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 24/123 (19%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSN-GAWKLGGFG-FAISTDQAISDSSNVQA 233
Q+ E++ H N ++HR I ENILI N G KL FG A+ D +D +
Sbjct: 121 FWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 179
Query: 234 FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCN 293
Y+ PE +R G S+ ++S G + Y ++ F+ +
Sbjct: 180 --------------------YSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHD 218
Query: 294 NNV 296
+
Sbjct: 219 EEI 221
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 24/123 (19%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSN-GAWKLGGFG-FAISTDQAISDSSNVQA 233
Q+ E++ H N ++HR I ENILI N G KL FG A+ D +D +
Sbjct: 155 FWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 213
Query: 234 FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCN 293
Y+ PE +R G S+ ++S G + Y ++ F+ +
Sbjct: 214 --------------------YSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHD 252
Query: 294 NNV 296
+
Sbjct: 253 EEI 255
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 24/123 (19%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSN-GAWKLGGFG-FAISTDQAISDSSNVQA 233
Q+ E++ H N ++HR I ENILI N G KL FG A+ D +D +
Sbjct: 136 FWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 194
Query: 234 FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCN 293
Y+ PE +R G S+ ++S G + Y ++ F+ +
Sbjct: 195 --------------------YSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHD 233
Query: 294 NNV 296
+
Sbjct: 234 EEI 236
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+QIA+ + +L + RL+HR ++ N+L+ + K+ FG A +
Sbjct: 126 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGRA-----------KLLGAEE 173
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
EY E +P++ + A E + + + SD++S+G + L+
Sbjct: 174 KEYHAEGGKVPIK----WMALESILHRIYTH--QSDVWSYGVTVWELM 215
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
+QIA+ + +L + RL+HR ++ N+L+ + K+ FG A +
Sbjct: 126 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGRA-----------KLLGAEE 173
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
EY E +P++ + A E + + + SD++S+G + L+
Sbjct: 174 KEYHAEGGKVPIK----WMALESILHRIYTH--QSDVWSYGVTVWELM 215
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 24/123 (19%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSN-GAWKLGGFG-FAISTDQAISDSSNVQA 233
Q+ E++ H N ++HR I ENILI N G KL FG A+ D +D +
Sbjct: 148 FWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 206
Query: 234 FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCN 293
Y+ PE +R G S+ ++S G + Y ++ F+ +
Sbjct: 207 --------------------YSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHD 245
Query: 294 NNV 296
+
Sbjct: 246 EEI 248
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 24/123 (19%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSN-GAWKLGGFG-FAISTDQAISDSSNVQA 233
Q+ E++ H N ++HR I ENILI N G KL FG A+ D +D +
Sbjct: 136 FWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 194
Query: 234 FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCN 293
Y+ PE +R G S+ ++S G + Y ++ F+ +
Sbjct: 195 --------------------YSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHD 233
Query: 294 NNV 296
+
Sbjct: 234 EEI 236
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 24/123 (19%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSN-GAWKLGGFG-FAISTDQAISDSSNVQA 233
Q+ E++ H N ++HR I ENILI N G KL FG A+ D +D +
Sbjct: 149 FWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 207
Query: 234 FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCN 293
Y+ PE +R G S+ ++S G + Y ++ F+ +
Sbjct: 208 --------------------YSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHD 246
Query: 294 NNV 296
+
Sbjct: 247 EEI 249
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 24/123 (19%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSN-GAWKLGGFG-FAISTDQAISDSSNVQA 233
Q+ E++ H N ++HR I ENILI N G KL FG A+ D +D +
Sbjct: 149 FWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 207
Query: 234 FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCN 293
Y+ PE +R G S+ ++S G + Y ++ F+ +
Sbjct: 208 --------------------YSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHD 246
Query: 294 NNV 296
+
Sbjct: 247 EEI 249
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 24/123 (19%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSN-GAWKLGGFG-FAISTDQAISDSSNVQA 233
Q+ E++ H N ++HR I ENILI N G KL FG A+ D +D +
Sbjct: 149 FWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 207
Query: 234 FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCN 293
Y+ PE +R G S+ ++S G + Y ++ F+ +
Sbjct: 208 --------------------YSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHD 246
Query: 294 NNV 296
+
Sbjct: 247 EEI 249
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 24/123 (19%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSN-GAWKLGGFG-FAISTDQAISDSSNVQA 233
Q+ E++ H N ++HR I ENILI N G KL FG A+ D +D +
Sbjct: 149 FWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 207
Query: 234 FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCN 293
Y+ PE +R G S+ ++S G + Y ++ F+ +
Sbjct: 208 --------------------YSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHD 246
Query: 294 NNV 296
+
Sbjct: 247 EEI 249
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 24/123 (19%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSN-GAWKLGGFG-FAISTDQAISDSSNVQA 233
Q+ E++ H N ++HR I ENILI N G KL FG A+ D +D +
Sbjct: 148 FWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 206
Query: 234 FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCN 293
Y+ PE +R G S+ ++S G + Y ++ F+ +
Sbjct: 207 --------------------YSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHD 245
Query: 294 NNV 296
+
Sbjct: 246 EEI 248
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 62/127 (48%), Gaps = 19/127 (14%)
Query: 177 LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHY 236
LQ+A+ +++L S + +HR ++ N ++ K+ FG A D + +V
Sbjct: 139 LQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLA--RDMYDKEXXSV----- 190
Query: 237 AEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARK--PLFDCNN 294
++ + LP++ + A E + +T F SD++SFG + + L+ R P D N
Sbjct: 191 --HNKTGAKLPVK----WMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 242
Query: 295 -NVKMYM 300
++ +Y+
Sbjct: 243 FDITVYL 249
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 36/189 (19%)
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKV 158
+AFL +A + +LRH +V + + E + +VTE + S ++L + +
Sbjct: 51 EAFLQ----EAQVMKKLRHEKLVQLYAVVSEE--PIYIVTE--YMSKGSLLDFLKGET-- 100
Query: 159 PRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFA 218
G + L ++ QIA + ++ +HR + NIL+ N K+ FG A
Sbjct: 101 -----GKYLRLPQLVDMAAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLA 154
Query: 219 ISTDQAISDSSNVQAFHYAEYDV-EDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFG 277
+ I D+ EY + + P++ +TAPE + F SD++SFG
Sbjct: 155 ----RLIEDN---------EYTARQGAKFPIK----WTAPEA--ALYGRFTIKSDVWSFG 195
Query: 278 CVAYHLIAR 286
+ L +
Sbjct: 196 ILLTELTTK 204
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAW-KLGGFGFAIS 220
L Q E LE+LHS R++H + +N+L++S+G+ L FG A+
Sbjct: 172 LGQALEGLEYLHSR-RILHGDVKADNVLLSSDGSHAALCDFGHAVC 216
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 71/170 (41%), Gaps = 30/170 (17%)
Query: 132 NAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNAR 191
+ M ++ EPL S+ ++ G + ++K ++I ++L +L +
Sbjct: 109 DHMCLIFEPLGPSLYEII--------TRNNYNGFHIE--DIKLYCIEILKALNYLRKMS- 157
Query: 192 LIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVE--------- 242
L H + PENIL+ F ++ T + ++D +Q + ++
Sbjct: 158 LTHTDLKPENILLDD------PYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATF 211
Query: 243 --DSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLF 290
D + + Y APE++ + + SSD++SFGCV L LF
Sbjct: 212 KSDYHGSIINTRQYRAPEVILNL--GWDVSSDMWSFGCVLAELYTGSLLF 259
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 44/193 (22%)
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVL----GNFEN 154
+AFL +A + +LRH +V + + E + +VTE + S ++L G
Sbjct: 58 EAFLQ----EAQVMKKLRHEKLVQLYAVVSEE--PIYIVTE--YMSKGSLLDFLKGEMGK 109
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
++P+ L++M QIA + ++ +HR ++ NIL+ N K+
Sbjct: 110 YLRLPQ--------LVDMAA---QIASGMAYVE-RMNYVHRDLAAANILVGENLVCKVAD 157
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDV-EDSMLPLQPSLNYTAPELVRSKTNSFGCSSDI 273
FG A + I D+ EY + + P++ +TAPE + F SD+
Sbjct: 158 FGLA----RLIEDN---------EYTARQGAKFPIK----WTAPEA--ALYGRFTIKSDV 198
Query: 274 FSFGCVAYHLIAR 286
+SFG + L +
Sbjct: 199 WSFGILLTELTTK 211
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 33.5 bits (75), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 24/123 (19%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSN-GAWKLGGFG-FAISTDQAISDSSNVQA 233
Q+ E++ H N ++HR I ENILI N G KL FG A+ D +D +
Sbjct: 163 FWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 221
Query: 234 FHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCN 293
Y+ PE +R G S+ ++S G + Y ++ F+ +
Sbjct: 222 --------------------YSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHD 260
Query: 294 NNV 296
+
Sbjct: 261 EEI 263
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 33.5 bits (75), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 42/192 (21%)
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKV 158
+AFL +A + +LRH +V + + E EP++ ++ + N +
Sbjct: 55 EAFLQ----EAQVMKKLRHEKLVQLYAVVSE---------EPIY-----IVTEYMNKGSL 96
Query: 159 PRELKGLEMSLLEMKHGL---LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGF 215
LKG L + + QIA + ++ +HR + NIL+ N K+ F
Sbjct: 97 LDFLKGETGKYLRLPQLVDMSAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADF 155
Query: 216 GFAISTDQAISDSSNVQAFHYAEYDV-EDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIF 274
G A + I D+ EY + + P++ +TAPE + F SD++
Sbjct: 156 GLA----RLIEDN---------EYTARQGAKFPIK----WTAPEA--ALYGRFTIKSDVW 196
Query: 275 SFGCVAYHLIAR 286
SFG + L +
Sbjct: 197 SFGILLTELTTK 208
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 33.1 bits (74), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 34/188 (18%)
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKV 158
+AFL +A + +LRH +V + + E + +VTE + S ++L + +
Sbjct: 48 EAFLQ----EAQVMKKLRHEKLVQLYAVVSEE--PIXIVTE--YMSKGSLLDFLKGET-- 97
Query: 159 PRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFA 218
G + L ++ QIA + ++ +HR + NIL+ N K+ FG A
Sbjct: 98 -----GKYLRLPQLVDMAAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLA 151
Query: 219 ISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGC 278
+ I D+ + + P++ +TAPE + F SD++SFG
Sbjct: 152 ----RLIEDNEXTAR--------QGAKFPIK----WTAPEA--ALYGRFTIKSDVWSFGI 193
Query: 279 VAYHLIAR 286
+ L +
Sbjct: 194 LLTELTTK 201
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 26/119 (21%)
Query: 169 LLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFA--ISTDQAIS 226
LLEM + E++E+L S + +HR ++ N L+ G K+ FG + + D+ S
Sbjct: 107 LLEM---CKDVCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 162
Query: 227 DSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
S P++ ++ PE++ + F SDI++FG + + + +
Sbjct: 163 SRG--------------SKFPVR----WSPPEVLM--YSKFSSKSDIWAFGVLMWEIYS 201
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 33.1 bits (74), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 18/108 (16%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+A+ +EFL + +HR ++ N+L+T K+ FG A +SDS+ V
Sbjct: 180 QVAKGMEFLEFKS-CVHRDLAARNVLVTHGKVVKICDFGLA---RDIMSDSNYVVR---- 231
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
++ LP++ + APE + + SD++S+G + + + +
Sbjct: 232 ----GNARLPVK----WMAPESLFEGI--YTIKSDVWSYGILLWEIFS 269
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 33.1 bits (74), Expect = 0.65, Method: Composition-based stats.
Identities = 41/199 (20%), Positives = 87/199 (43%), Gaps = 33/199 (16%)
Query: 93 LTKSAED-AFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGN 151
L A D A D + A+A + +L +P IV ++ + + M L G
Sbjct: 40 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAEL--------GP 91
Query: 152 FENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWK 211
+ R +K + +++E+ H Q++ +++L + +HR ++ N+L+ + K
Sbjct: 92 LNKYLQQNRHVK--DKNIIELVH---QVSMGMKYLEE-SNFVHRDLAARNVLLVTQHYAK 145
Query: 212 LGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS 271
+ FG + + +D + +A + ++ V+ + APE + F S
Sbjct: 146 ISDFGLSKALR---ADENYYKAQTHGKWPVK-----------WYAPECI--NYYKFSSKS 189
Query: 272 DIFSFGCVAYHLIA--RKP 288
D++SFG + + + +KP
Sbjct: 190 DVWSFGVLMWEAFSYGQKP 208
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 33.1 bits (74), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 36/189 (19%)
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKV 158
+AFL +A + +LRH +V + + E + +VTE + S ++L + +
Sbjct: 224 EAFLQ----EAQVMKKLRHEKLVQLYAVVSEE--PIYIVTE--YMSKGSLLDFLKGET-- 273
Query: 159 PRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFA 218
G + L ++ QIA + ++ +HR + NIL+ N K+ FG A
Sbjct: 274 -----GKYLRLPQLVDMAAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLA 327
Query: 219 ISTDQAISDSSNVQAFHYAEYDV-EDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFG 277
+ I D+ EY + + P++ +TAPE + F SD++SFG
Sbjct: 328 ----RLIEDN---------EYTARQGAKFPIK----WTAPEA--ALYGRFTIKSDVWSFG 368
Query: 278 CVAYHLIAR 286
+ L +
Sbjct: 369 ILLTELTTK 377
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 33.1 bits (74), Expect = 0.65, Method: Composition-based stats.
Identities = 41/199 (20%), Positives = 87/199 (43%), Gaps = 33/199 (16%)
Query: 93 LTKSAED-AFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGN 151
L A D A D + A+A + +L +P IV ++ + + M L G
Sbjct: 42 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAEL--------GP 93
Query: 152 FENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWK 211
+ R +K + +++E+ H Q++ +++L + +HR ++ N+L+ + K
Sbjct: 94 LNKYLQQNRHVK--DKNIIELVH---QVSMGMKYLEE-SNFVHRDLAARNVLLVTQHYAK 147
Query: 212 LGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS 271
+ FG + + +D + +A + ++ V+ + APE + F S
Sbjct: 148 ISDFGLSKALR---ADENYYKAQTHGKWPVK-----------WYAPECI--NYYKFSSKS 191
Query: 272 DIFSFGCVAYHLIA--RKP 288
D++SFG + + + +KP
Sbjct: 192 DVWSFGVLMWEAFSYGQKP 210
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 33.1 bits (74), Expect = 0.65, Method: Composition-based stats.
Identities = 41/199 (20%), Positives = 87/199 (43%), Gaps = 33/199 (16%)
Query: 93 LTKSAED-AFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGN 151
L A D A D + A+A + +L +P IV ++ + + M L G
Sbjct: 46 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAEL--------GP 97
Query: 152 FENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWK 211
+ R +K + +++E+ H Q++ +++L + +HR ++ N+L+ + K
Sbjct: 98 LNKYLQQNRHVK--DKNIIELVH---QVSMGMKYLEE-SNFVHRDLAARNVLLVTQHYAK 151
Query: 212 LGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS 271
+ FG + + +D + +A + ++ V+ + APE + F S
Sbjct: 152 ISDFGLSKALR---ADENYYKAQTHGKWPVK-----------WYAPECI--NYYKFSSKS 195
Query: 272 DIFSFGCVAYHLIA--RKP 288
D++SFG + + + +KP
Sbjct: 196 DVWSFGVLMWEAFSYGQKP 214
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 33.1 bits (74), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 22/117 (18%)
Query: 169 LLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDS 228
LLEM + E++E+L S + +HR ++ N L+ G K+ FG +
Sbjct: 102 LLEM---CKDVCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLS---------- 147
Query: 229 SNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
Y D S + + + ++ PE++ + F SDI++FG + + + +
Sbjct: 148 ------RYVLDDEYTSSVGSKFPVRWSPPEVLM--YSKFSSKSDIWAFGVLMWEIYS 196
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 33.1 bits (74), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 41/102 (40%), Gaps = 18/102 (17%)
Query: 180 AESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEY 239
A +E+L S IHR ++ N L+T K+ FG + + +S
Sbjct: 223 AAGMEYLESKC-CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLR------ 275
Query: 240 DVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAY 281
Q + +TAPE + + SD++SFG + +
Sbjct: 276 ---------QVPVKWTAPEAL--NYGRYSSESDVWSFGILLW 306
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 33.1 bits (74), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 20/112 (17%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAW-KLGGFGFAISTDQAISDSSNVQAF 234
L Q E LE+LH+ R++H + +N+L++S+G+ L FG A+ + ++
Sbjct: 172 LGQALEGLEYLHTR-RILHGDVKADNVLLSSDGSRAALCDFGHAL----CLQPDGLGKSL 226
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS--DIFSFGCVAYHLI 284
+Y + + + APE+V K C + DI+S C+ H++
Sbjct: 227 LTGDY--------IPGTETHMAPEVVMGKP----CDAKVDIWSSCCMMLHML 266
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 33.1 bits (74), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 22/117 (18%)
Query: 169 LLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDS 228
LLEM + E++E+L S + +HR ++ N L+ G K+ FG +
Sbjct: 106 LLEM---CKDVCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLS---------- 151
Query: 229 SNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
Y D S + + + ++ PE++ + F SDI++FG + + + +
Sbjct: 152 ------RYVLDDEYTSSVGSKFPVRWSPPEVLM--YSKFSSKSDIWAFGVLMWEIYS 200
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 33.1 bits (74), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 36/189 (19%)
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKV 158
+AFL +A + +LRH +V + + E + +VTE + S ++L + +
Sbjct: 224 EAFLQ----EAQVMKKLRHEKLVQLYAVVSEE--PIYIVTE--YMSKGSLLDFLKGET-- 273
Query: 159 PRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFA 218
G + L ++ QIA + ++ +HR + NIL+ N K+ FG A
Sbjct: 274 -----GKYLRLPQLVDMAAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLA 327
Query: 219 ISTDQAISDSSNVQAFHYAEYDV-EDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFG 277
+ I D+ EY + + P++ +TAPE + F SD++SFG
Sbjct: 328 ----RLIEDN---------EYTARQGAKFPIK----WTAPEA--ALYGRFTIKSDVWSFG 368
Query: 278 CVAYHLIAR 286
+ L +
Sbjct: 369 ILLTELTTK 377
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 33.1 bits (74), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 20/112 (17%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAW-KLGGFGFAISTDQAISDSSNVQAF 234
L Q E LE+LH+ R++H + +N+L++S+G+ L FG A+ + ++
Sbjct: 156 LGQALEGLEYLHTR-RILHGDVKADNVLLSSDGSRAALCDFGHAL----CLQPDGLGKSL 210
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS--DIFSFGCVAYHLI 284
+Y + + + APE+V K C + DI+S C+ H++
Sbjct: 211 LTGDY--------IPGTETHMAPEVVMGKP----CDAKVDIWSSCCMMLHML 250
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 33.1 bits (74), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 26/123 (21%)
Query: 176 LLQIAESLEFLH-------SNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDS 228
+L IA L LH + HR + +NIL+ NG + G A+ Q+ +
Sbjct: 111 VLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTN-- 168
Query: 229 SNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC-----SSDIFSFGCVAYHL 283
+ DV ++ P + Y APE++ +T C DI++FG V + +
Sbjct: 169 ---------QLDVGNN--PRVGTKRYMAPEVL-DETIQVDCFDSYKRVDIWAFGLVLWEV 216
Query: 284 IAR 286
R
Sbjct: 217 ARR 219
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 33.1 bits (74), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 20/103 (19%)
Query: 180 AESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAI-STDQAISDSSNVQAFHYAE 238
A +E+L S IHR ++ N L+T K+ FG + D + S ++
Sbjct: 223 AAGMEYLESKC-CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLR------ 275
Query: 239 YDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAY 281
Q + +TAPE + + SD++SFG + +
Sbjct: 276 ----------QVPVKWTAPEAL--NYGRYSSESDVWSFGILLW 306
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 33.1 bits (74), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 44/193 (22%)
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVL----GNFEN 154
+AFL +A + +LRH +V + + E + +VTE + S ++L G
Sbjct: 49 EAFLQ----EAQVMKKLRHEKLVQLYAVVSEE--PIYIVTE--YMSKGSLLDFLKGEMGK 100
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
++P+ L++M QIA + ++ +HR + NIL+ N K+
Sbjct: 101 YLRLPQ--------LVDMAA---QIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVAD 148
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDV-EDSMLPLQPSLNYTAPELVRSKTNSFGCSSDI 273
FG A + I D+ EY + + P++ +TAPE + F SD+
Sbjct: 149 FGLA----RLIEDN---------EYTARQGAKFPIK----WTAPEA--ALYGRFTIKSDV 189
Query: 274 FSFGCVAYHLIAR 286
+SFG + L +
Sbjct: 190 WSFGILLTELTTK 202
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 22/117 (18%)
Query: 169 LLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDS 228
LLEM + E++E+L S + +HR ++ N L+ G K+ FG +
Sbjct: 122 LLEM---CKDVCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLS---------- 167
Query: 229 SNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
Y D S + + + ++ PE++ + F SDI++FG + + + +
Sbjct: 168 ------RYVLDDEYTSSVGSKFPVRWSPPEVLM--YSKFSSKSDIWAFGVLMWEIYS 216
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 32.7 bits (73), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 26/123 (21%)
Query: 176 LLQIAESLEFLH-------SNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDS 228
+L IA L LH + HR + +NIL+ NG + G A+ Q+ +
Sbjct: 111 VLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTN-- 168
Query: 229 SNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS-----DIFSFGCVAYHL 283
+ DV ++ P + Y APE++ +T C DI++FG V + +
Sbjct: 169 ---------QLDVGNN--PRVGTKRYMAPEVL-DETIQVDCFDSYKRVDIWAFGLVLWEV 216
Query: 284 IAR 286
R
Sbjct: 217 ARR 219
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 32.7 bits (73), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 22/117 (18%)
Query: 169 LLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDS 228
LLEM + E++E+L S + +HR ++ N L+ G K+ FG +
Sbjct: 107 LLEM---CKDVCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLS---------- 152
Query: 229 SNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
Y D S + + + ++ PE++ + F SDI++FG + + + +
Sbjct: 153 ------RYVLDDEYTSSVGSKFPVRWSPPEVLM--YSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 32.7 bits (73), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 44/193 (22%)
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVL----GNFEN 154
+AFL +A + +LRH +V + + E + +VTE + S ++L G
Sbjct: 47 EAFLQ----EAQVMKKLRHEKLVQLYAVVSEE--PIYIVTE--YMSKGSLLDFLKGEMGK 98
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
++P+ L++M QIA + ++ +HR + NIL+ N K+
Sbjct: 99 YLRLPQ--------LVDMAA---QIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVAD 146
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDV-EDSMLPLQPSLNYTAPELVRSKTNSFGCSSDI 273
FG A + I D+ EY + + P++ +TAPE + F SD+
Sbjct: 147 FGLA----RLIEDN---------EYTARQGAKFPIK----WTAPEA--ALYGRFTIKSDV 187
Query: 274 FSFGCVAYHLIAR 286
+SFG + L +
Sbjct: 188 WSFGILLTELTTK 200
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 32.7 bits (73), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 44/193 (22%)
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVL----GNFEN 154
+AFL +A + +LRH +V + + E + +VTE + S ++L G
Sbjct: 58 EAFLQ----EAQVMKKLRHEKLVQLYAVVSEE--PIYIVTE--YMSKGSLLDFLKGEMGK 109
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
++P+ L++M QIA + ++ +HR + NIL+ N K+
Sbjct: 110 YLRLPQ--------LVDMAA---QIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVAD 157
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDV-EDSMLPLQPSLNYTAPELVRSKTNSFGCSSDI 273
FG A + I D+ EY + + P++ +TAPE + F SD+
Sbjct: 158 FGLA----RLIEDN---------EYTARQGAKFPIK----WTAPEA--ALYGRFTIKSDV 198
Query: 274 FSFGCVAYHLIAR 286
+SFG + L +
Sbjct: 199 WSFGILLTELTTK 211
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 32.7 bits (73), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 22/117 (18%)
Query: 169 LLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDS 228
LLEM + E++E+L S + +HR ++ N L+ G K+ FG +
Sbjct: 113 LLEM---CKDVCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLS---------- 158
Query: 229 SNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
Y D S + + + ++ PE++ + F SDI++FG + + + +
Sbjct: 159 ------RYVLDDEYTSSVGSKFPVRWSPPEVLM--YSKFSSKSDIWAFGVLMWEIYS 207
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 32.7 bits (73), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 28/100 (28%)
Query: 192 LIHRAISPENILIT---SNGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPL 248
++HR + PEN+L T N K+ FGFA + N PL
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFA-----RLKPPDNQ---------------PL 166
Query: 249 QP---SLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIA 285
+ +L+Y APEL+ N + S D++S G + Y +++
Sbjct: 167 KTPCFTLHYAAPELLNQ--NGYDESCDLWSLGVILYTMLS 204
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 32.7 bits (73), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 26/123 (21%)
Query: 176 LLQIAESLEFLH-------SNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDS 228
+L IA L LH + HR + +NIL+ NG + G A+ Q+ +
Sbjct: 140 VLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTN-- 197
Query: 229 SNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS-----DIFSFGCVAYHL 283
+ DV ++ P + Y APE++ +T C DI++FG V + +
Sbjct: 198 ---------QLDVGNN--PRVGTKRYMAPEVL-DETIQVDCFDSYKRVDIWAFGLVLWEV 245
Query: 284 IAR 286
R
Sbjct: 246 ARR 248
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 32.7 bits (73), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 20/112 (17%)
Query: 176 LLQIAESLEFLHSNARLIHRAISPENILITSNGAW-KLGGFGFAISTDQAISDSSNVQAF 234
L Q E LE+LH+ R++H + +N+L++S+G+ L FG A+ + ++
Sbjct: 170 LGQALEGLEYLHTR-RILHGDVKADNVLLSSDGSRAALCDFGHAL----CLQPDGLGKSL 224
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS--DIFSFGCVAYHLI 284
+Y + + + APE+V K C + DI+S C+ H++
Sbjct: 225 LTGDY--------IPGTETHMAPEVVMGKP----CDAKVDIWSSCCMMLHML 264
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 32.7 bits (73), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 83/190 (43%), Gaps = 31/190 (16%)
Query: 93 LTKSAED-AFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGN 151
L A D A D + A+A + +L +P IV ++ + + M L G
Sbjct: 62 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAEL--------GP 113
Query: 152 FENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWK 211
+ R +K + +++E+ H Q++ +++L + +HR ++ N+L+ + K
Sbjct: 114 LNKYLQQNRHVK--DKNIIELVH---QVSMGMKYLEE-SNFVHRDLAARNVLLVTQHYAK 167
Query: 212 LGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS 271
+ FG + + +D + +A + ++ V+ + APE + F S
Sbjct: 168 ISDFGLSKALR---ADENYYKAQTHGKWPVK-----------WYAPECI--NYYKFSSKS 211
Query: 272 DIFSFGCVAY 281
D++SFG + +
Sbjct: 212 DVWSFGVLMW 221
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 32.7 bits (73), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 83/190 (43%), Gaps = 31/190 (16%)
Query: 93 LTKSAED-AFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGN 151
L A D A D + A+A + +L +P IV ++ + + M L G
Sbjct: 62 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAEL--------GP 113
Query: 152 FENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWK 211
+ R +K + +++E+ H Q++ +++L + +HR ++ N+L+ + K
Sbjct: 114 LNKYLQQNRHVK--DKNIIELVH---QVSMGMKYLEE-SNFVHRDLAARNVLLVTQHYAK 167
Query: 212 LGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS 271
+ FG + + +D + +A + ++ V+ + APE + F S
Sbjct: 168 ISDFGLSKALR---ADENYYKAQTHGKWPVK-----------WYAPECI--NYYKFSSKS 211
Query: 272 DIFSFGCVAY 281
D++SFG + +
Sbjct: 212 DVWSFGVLMW 221
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 32.7 bits (73), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 83/190 (43%), Gaps = 31/190 (16%)
Query: 93 LTKSAED-AFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGN 151
L A D A D + A+A + +L +P IV ++ + + M L G
Sbjct: 52 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAEL--------GP 103
Query: 152 FENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWK 211
+ R +K + +++E+ H Q++ +++L + +HR ++ N+L+ + K
Sbjct: 104 LNKYLQQNRHVK--DKNIIELVH---QVSMGMKYLEE-SNFVHRDLAARNVLLVTQHYAK 157
Query: 212 LGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS 271
+ FG + + +D + +A + ++ V+ + APE + F S
Sbjct: 158 ISDFGLSKALR---ADENYYKAQTHGKWPVK-----------WYAPECI--NYYKFSSKS 201
Query: 272 DIFSFGCVAY 281
D++SFG + +
Sbjct: 202 DVWSFGVLMW 211
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 83/190 (43%), Gaps = 31/190 (16%)
Query: 93 LTKSAED-AFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGN 151
L A D A D + A+A + +L +P IV ++ + + M L G
Sbjct: 60 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAEL--------GP 111
Query: 152 FENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWK 211
+ R +K + +++E+ H Q++ +++L + +HR ++ N+L+ + K
Sbjct: 112 LNKYLQQNRHVK--DKNIIELVH---QVSMGMKYLEE-SNFVHRDLAARNVLLVTQHYAK 165
Query: 212 LGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS 271
+ FG + + +D + +A + ++ V+ + APE + F S
Sbjct: 166 ISDFGLSKALR---ADENYYKAQTHGKWPVK-----------WYAPECI--NYYKFSSKS 209
Query: 272 DIFSFGCVAY 281
D++SFG + +
Sbjct: 210 DVWSFGVLMW 219
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
+I + + +LH+ ++H+ + +N+ NG + FG S S +QA
Sbjct: 138 EIVKGMGYLHAKG-ILHKDLKSKNVFY-DNGKVVITDFGL-------FSISGVLQAGRR- 187
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNS-------FGCSSDIFSFGCVAYHLIARKPLF 290
ED + L + APE++R + F SD+F+ G + Y L AR+ F
Sbjct: 188 ----EDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPF 243
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 36/189 (19%)
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKV 158
+AFL +A + +LRH +V + + E + +VTE + S ++L + +
Sbjct: 307 EAFLQ----EAQVMKKLRHEKLVQLYAVVSEE--PIYIVTE--YMSKGSLLDFLKGET-- 356
Query: 159 PRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFA 218
G + L ++ QIA + ++ +HR + NIL+ N K+ FG A
Sbjct: 357 -----GKYLRLPQLVDMAAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLA 410
Query: 219 ISTDQAISDSSNVQAFHYAEYDV-EDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFG 277
+ I D+ EY + + P++ +TAPE + F SD++SFG
Sbjct: 411 ----RLIEDN---------EYTARQGAKFPIK----WTAPEA--ALYGRFTIKSDVWSFG 451
Query: 278 CVAYHLIAR 286
+ L +
Sbjct: 452 ILLTELTTK 460
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 83/190 (43%), Gaps = 31/190 (16%)
Query: 93 LTKSAED-AFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGN 151
L A D A D + A+A + +L +P IV ++ + + M L G
Sbjct: 404 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAEL--------GP 455
Query: 152 FENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWK 211
+ R +K + +++E+ H Q++ +++L + +HR ++ N+L+ + K
Sbjct: 456 LNKYLQQNRHVK--DKNIIELVH---QVSMGMKYL-EESNFVHRDLAARNVLLVTQHYAK 509
Query: 212 LGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS 271
+ FG + + +D + +A + ++ V+ + APE + F S
Sbjct: 510 ISDFGLSKALR---ADENYYKAQTHGKWPVK-----------WYAPECI--NYYKFSSKS 553
Query: 272 DIFSFGCVAY 281
D++SFG + +
Sbjct: 554 DVWSFGVLMW 563
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 77/191 (40%), Gaps = 40/191 (20%)
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKV 158
+AFL +A + +LRH +V + + E EP++ ++ + N +
Sbjct: 55 EAFLQ----EAQVMKKLRHEKLVQLYAVVSE---------EPIY-----IVTEYMNKGSL 96
Query: 159 PRELKGLEMSLLEMKHGL---LQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGF 215
LKG L + + QIA + ++ +HR + NIL+ N K+ F
Sbjct: 97 LDFLKGETGKYLRLPQLVDMSAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADF 155
Query: 216 GFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFS 275
G A + I D+ + + P++ +TAPE + F SD++S
Sbjct: 156 GLA----RLIEDNEWTAR--------QGAKFPIK----WTAPEA--ALYGRFTIKSDVWS 197
Query: 276 FGCVAYHLIAR 286
FG + L +
Sbjct: 198 FGILLTELTTK 208
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 83/190 (43%), Gaps = 31/190 (16%)
Query: 93 LTKSAED-AFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGN 151
L A D A D + A+A + +L +P IV ++ + + M L G
Sbjct: 405 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAEL--------GP 456
Query: 152 FENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWK 211
+ R +K + +++E+ H Q++ +++L + +HR ++ N+L+ + K
Sbjct: 457 LNKYLQQNRHVK--DKNIIELVH---QVSMGMKYL-EESNFVHRDLAARNVLLVTQHYAK 510
Query: 212 LGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSS 271
+ FG + + +D + +A + ++ V+ + APE + F S
Sbjct: 511 ISDFGLSKALR---ADENYYKAQTHGKWPVK-----------WYAPECI--NYYKFSSKS 554
Query: 272 DIFSFGCVAY 281
D++SFG + +
Sbjct: 555 DVWSFGVLMW 564
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/186 (19%), Positives = 72/186 (38%), Gaps = 37/186 (19%)
Query: 112 LVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLE 171
L +L HP I + + E+K +V E F+ + R S ++
Sbjct: 80 LKQLDHPNIXKLYEFF-EDKGYFYLVGEVYTGGEL-----FDEIISRKR------FSEVD 127
Query: 172 MKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNV 231
+ Q+ + + H N +++HR + PEN+L+ S S +N+
Sbjct: 128 AARIIRQVLSGITYXHKN-KIVHRDLKPENLLLESK------------------SKDANI 168
Query: 232 QAFHYA---EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKP 288
+ + ++ + Y APE++ ++ D++S G + Y L++ P
Sbjct: 169 RIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHG---TYDEKCDVWSTGVILYILLSGCP 225
Query: 289 LFDCNN 294
F+ N
Sbjct: 226 PFNGAN 231
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 57/148 (38%), Gaps = 44/148 (29%)
Query: 160 RELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITS------------- 206
R LE S++ + +A +L+FLH N + HR + PENIL
Sbjct: 106 RHFNELEASVV-----VQDVASALDFLH-NKGIAHRDLKPENILCEHPNQVSPVKICDFD 159
Query: 207 -NGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLPLQPSLNYTAPELVRS--- 262
KL G IST + ++ S Y APE+V +
Sbjct: 160 LGSGIKLNGDCSPISTPELLTPCG---------------------SAEYMAPEVVEAFSE 198
Query: 263 KTNSFGCSSDIFSFGCVAYHLIARKPLF 290
+ + + D++S G + Y L++ P F
Sbjct: 199 EASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 82/193 (42%), Gaps = 44/193 (22%)
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVL----GNFEN 154
+AFL +A + +LRH +V + + E + +VTE + S +L G
Sbjct: 58 EAFLQ----EAQVMKKLRHEKLVQLYAVVSEE--PIYIVTE--YMSKGCLLDFLKGEMGK 109
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
++P+ L++M QIA + ++ +HR + NIL+ N K+
Sbjct: 110 YLRLPQ--------LVDMAA---QIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVAD 157
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDV-EDSMLPLQPSLNYTAPELVRSKTNSFGCSSDI 273
FG A + I D+ EY + + P++ +TAPE + F SD+
Sbjct: 158 FGLA----RLIEDN---------EYTARQGAKFPIK----WTAPEA--ALYGRFTIKSDV 198
Query: 274 FSFGCVAYHLIAR 286
+SFG + L +
Sbjct: 199 WSFGILLTELTTK 211
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 44/193 (22%)
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVL----GNFEN 154
+AFL +A + ++RH +V + + E + +VTE + S ++L G
Sbjct: 58 EAFLQ----EAQVMKKIRHEKLVQLYAVVSEE--PIYIVTE--YMSKGSLLDFLKGEMGK 109
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
++P+ L++M QIA + ++ +HR + NIL+ N K+
Sbjct: 110 YLRLPQ--------LVDMAA---QIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVAD 157
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDV-EDSMLPLQPSLNYTAPELVRSKTNSFGCSSDI 273
FG A + I D+ EY + + P++ +TAPE + F SD+
Sbjct: 158 FGLA----RLIEDN---------EYTARQGAKFPIK----WTAPEA--ALYGRFTIKSDV 198
Query: 274 FSFGCVAYHLIAR 286
+SFG + L +
Sbjct: 199 WSFGILLTELTTK 211
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 21/110 (19%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QIA + ++ +HR + NIL+ N K+ FG A + I D+
Sbjct: 122 QIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLA----RLIEDN--------- 167
Query: 238 EYDV-EDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIAR 286
EY + + P++ +TAPE + F SD++SFG + L +
Sbjct: 168 EYTARQGAKFPIK----WTAPEA--ALYGRFTIKSDVWSFGILLTELTTK 211
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 171 EMKHGLLQIAESLEFLHSNARLIHRAISPENILIT 205
E+K LLQ+ L ++HS + L+H I P NI I+
Sbjct: 116 ELKDLLLQVGRGLRYIHSMS-LVHMDIKPSNIFIS 149
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 171 EMKHGLLQIAESLEFLHSNARLIHRAISPENILIT 205
E+K LLQ+ L ++HS + L+H I P NI I+
Sbjct: 114 ELKDLLLQVGRGLRYIHSMS-LVHMDIKPSNIFIS 147
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 171 EMKHGLLQIAESLEFLHSNARLIHRAISPENILIT 205
E+K LLQ+ L ++HS + L+H I P NI I+
Sbjct: 112 ELKDLLLQVGRGLRYIHSMS-LVHMDIKPSNIFIS 145
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 21/110 (19%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QIA + ++ +HR + NIL+ N K+ FG A + I D+
Sbjct: 122 QIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLA----RLIEDN--------- 167
Query: 238 EYDV-EDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIAR 286
EY + + P++ +TAPE + F SD++SFG + L +
Sbjct: 168 EYTARQGAKFPIK----WTAPEA--ALYGRFTIKSDVWSFGILLTELTTK 211
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 171 EMKHGLLQIAESLEFLHSNARLIHRAISPENILIT 205
E+K LLQ+ L ++HS + L+H I P NI I+
Sbjct: 114 ELKDLLLQVGRGLRYIHSMS-LVHMDIKPSNIFIS 147
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 21/110 (19%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QIA + ++ +HR + NIL+ N K+ FG A + I D+
Sbjct: 122 QIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLA----RLIEDN--------- 167
Query: 238 EYDV-EDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIAR 286
EY + + P++ +TAPE + F SD++SFG + L +
Sbjct: 168 EYTARQGAKFPIK----WTAPEA--ALYGRFTIKSDVWSFGILLTELTTK 211
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 21/119 (17%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
Q+A + ++ IHR + NIL+ + K+ FG A + I D+
Sbjct: 113 QVAAGMAYIE-RMNYIHRDLRSANILVGNGLICKIADFGLA----RLIEDNEXTAR---- 163
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI--ARKPLFDCNN 294
+ + P++ +TAPE + F SD++SFG + L+ R P NN
Sbjct: 164 ----QGAKFPIK----WTAPE--AALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN 212
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 13/114 (11%)
Query: 175 GLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAF 234
GL + + + HR + +NIL+ NG + G A+ + ISD++ V
Sbjct: 146 GLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV---KFISDTNEVDIP 202
Query: 235 HYAEYDVEDSMLP--LQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIAR 286
+ M P L SLN R+ S+ +D++SFG + + + R
Sbjct: 203 PNTRVGTKRYMPPEVLDESLN-------RNHFQSY-IMADMYSFGLILWEVARR 248
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 19/109 (17%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QIA + ++ +HR + NIL+ N K+ FG A + I D+
Sbjct: 122 QIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLA----RLIEDNEXTAR---- 172
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIAR 286
+ + P++ +TAPE + F SD++SFG + L +
Sbjct: 173 ----QGAKFPIK----WTAPEA--ALYGRFTIKSDVWSFGILLTELTTK 211
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 82/193 (42%), Gaps = 44/193 (22%)
Query: 99 DAFLDLVRADAGKLVRLRHPGIVHVVQAMDENKNAMAMVTEPLFASVANVL----GNFEN 154
+AFL +A + +LRH +V + + E + +VTE + S ++L G
Sbjct: 225 EAFLQ----EAQVMKKLRHEKLVQLYAVVSEE--PIYIVTE--YMSKGSLLDFLKGEMGK 276
Query: 155 VSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKLGG 214
++P+ L++M QIA + ++ +HR + NIL+ N K+
Sbjct: 277 YLRLPQ--------LVDMA---AQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVAD 324
Query: 215 FGFAISTDQAISDSSNVQAFHYAEYDV-EDSMLPLQPSLNYTAPELVRSKTNSFGCSSDI 273
FG + I D+ EY + + P++ +TAPE + F SD+
Sbjct: 325 FGLG----RLIEDN---------EYTARQGAKFPIK----WTAPEA--ALYGRFTIKSDV 365
Query: 274 FSFGCVAYHLIAR 286
+SFG + L +
Sbjct: 366 WSFGILLTELTTK 378
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 30.8 bits (68), Expect = 3.6, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 24/109 (22%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSN-GAWKLGGFGF-AISTDQAISDSSNVQAFH 235
Q+ E++ H N ++HR I ENILI N G KL FG A+ D +D +
Sbjct: 118 QVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV-- 174
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
Y+ PE +R G S+ ++S G + Y ++
Sbjct: 175 ------------------YSPPEWIRYH-RYHGRSAAVWSLGILLYDMV 204
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 30.8 bits (68), Expect = 3.7, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 24/109 (22%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSN-GAWKLGGFGF-AISTDQAISDSSNVQAFH 235
Q+ E++ H N ++HR I ENILI N G KL FG A+ D +D +
Sbjct: 118 QVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV-- 174
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
Y+ PE +R G S+ ++S G + Y ++
Sbjct: 175 ------------------YSPPEWIRYH-RYHGRSAAVWSLGILLYDMV 204
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 30.8 bits (68), Expect = 3.7, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 24/109 (22%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSN-GAWKLGGFGF-AISTDQAISDSSNVQAFH 235
Q+ E++ H N ++HR I ENILI N G KL FG A+ D +D +
Sbjct: 121 QVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV-- 177
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
Y+ PE +R G S+ ++S G + Y ++
Sbjct: 178 ------------------YSPPEWIRYH-RYHGRSAAVWSLGILLYDMV 207
>pdb|4DKJ|A Chain A, Cpg Specific Methyltransferase In Complex With Target Dna
Length = 403
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/102 (20%), Positives = 41/102 (40%), Gaps = 11/102 (10%)
Query: 153 ENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHSNARLIHRAISPENILITSNGAWKL 212
E V P+++K + + K+ L E+ F + + +I R + + N + +
Sbjct: 252 EKVKNPPKKIKDILVDSSNYKYLNLNKYETTTFRETKSNIISRPLKNYTTFNSENYVYNI 311
Query: 213 GGFG-----------FAISTDQAISDSSNVQAFHYAEYDVED 243
G G I T Q + + ++ F Y ++DV D
Sbjct: 312 NGIGPTLTASGANSRIKIETQQGVRYLTPLECFKYMQFDVND 353
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/107 (18%), Positives = 46/107 (42%), Gaps = 18/107 (16%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI++ +++L + +L+HR ++ NIL+ K+ FG + + S Q
Sbjct: 158 QISQGMQYL-AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPV 216
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
++ +S+ + + SD++SFG + + ++
Sbjct: 217 KWMAIESLF-----------------DHIYTTQSDVWSFGVLLWEIV 246
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 30.4 bits (67), Expect = 4.2, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 24/109 (22%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSN-GAWKLGGFGF-AISTDQAISDSSNVQAFH 235
Q+ E++ H N ++HR I ENILI N G KL FG A+ D +D +
Sbjct: 118 QVLEAVRHCH-NXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV-- 174
Query: 236 YAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
Y+ PE +R G S+ ++S G + Y ++
Sbjct: 175 ------------------YSPPEWIRYH-RYHGRSAAVWSLGILLYDMV 204
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 69/169 (40%), Gaps = 35/169 (20%)
Query: 131 KNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHS-N 189
+N + +V E L ++ ++L N +G+ ++L + Q+ +L FL +
Sbjct: 128 RNHLCLVFEMLSYNLYDLLRN--------TNFRGVSLNL--TRKFAQQMCTALLFLATPE 177
Query: 190 ARLIHRAISPENILITS--NGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLP 247
+IH + PENIL+ + A K+ FG + Q I
Sbjct: 178 LSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQ----------------- 220
Query: 248 LQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNV 296
S Y +PE++ + + D++S GC+ + +PLF N V
Sbjct: 221 ---SRFYRSPEVLLGM--PYDLAIDMWSLGCILVEMHTGEPLFSGANEV 264
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 30.0 bits (66), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 71/169 (42%), Gaps = 35/169 (20%)
Query: 131 KNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHS-N 189
+N + +V E L ++ ++L N +G+ ++L + Q+ +L FL +
Sbjct: 109 RNHLCLVFEMLSYNLYDLLRN--------TNFRGVSLNL--TRKFAQQMCTALLFLATPE 158
Query: 190 ARLIHRAISPENILITS--NGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLP 247
+IH + PENIL+ + A K+ FG + Q I +Q
Sbjct: 159 LSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQX--IQ--------------- 201
Query: 248 LQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNV 296
S Y +PE++ + + D++S GC+ + +PLF N V
Sbjct: 202 ---SRFYRSPEVLLGM--PYDLAIDMWSLGCILVEMHTGEPLFSGANEV 245
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 30.0 bits (66), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 69/169 (40%), Gaps = 35/169 (20%)
Query: 131 KNAMAMVTEPLFASVANVLGNFENVSKVPRELKGLEMSLLEMKHGLLQIAESLEFLHS-N 189
+N + +V E L ++ ++L N +G+ ++L + Q+ +L FL +
Sbjct: 128 RNHLCLVFEMLSYNLYDLLRN--------TNFRGVSLNL--TRKFAQQMCTALLFLATPE 177
Query: 190 ARLIHRAISPENILITS--NGAWKLGGFGFAISTDQAISDSSNVQAFHYAEYDVEDSMLP 247
+IH + PENIL+ + A K+ FG + Q I
Sbjct: 178 LSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQ----------------- 220
Query: 248 LQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLIARKPLFDCNNNV 296
S Y +PE++ + + D++S GC+ + +PLF N V
Sbjct: 221 ---SRFYRSPEVLLGM--PYDLAIDMWSLGCILVEMHTGEPLFSGANEV 264
>pdb|3EFZ|A Chain A, Crystal Structure Of A 14-3-3 Protein From Cryptosporidium
Parvum (Cgd1_2980)
pdb|3EFZ|B Chain B, Crystal Structure Of A 14-3-3 Protein From Cryptosporidium
Parvum (Cgd1_2980)
pdb|3EFZ|C Chain C, Crystal Structure Of A 14-3-3 Protein From Cryptosporidium
Parvum (Cgd1_2980)
pdb|3EFZ|D Chain D, Crystal Structure Of A 14-3-3 Protein From Cryptosporidium
Parvum (Cgd1_2980)
Length = 268
Score = 30.0 bits (66), Expect = 6.0, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 306 LSSDAFSSIPSDLV---PDLQKMLSANESFRPTAMDFTGSRFFRDDT-----RLRALRFL 357
LS A+ + +D+V D+ K+L+ + FR ++ + R+ L++++
Sbjct: 29 LSEGAYRAKLADMVGNYKDVIKVLTESSDFRDNSLILLLAGSLRNRVTSIRNSLKSIKSQ 88
Query: 358 DHMLERDNMQKSEFLKALSDMWKDFDSRVL 387
+ L ++ +EF++ + D+ +DF+ +L
Sbjct: 89 EEKLRKEKSLNNEFIQVIEDIKRDFEESIL 118
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 30.0 bits (66), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/107 (18%), Positives = 46/107 (42%), Gaps = 18/107 (16%)
Query: 178 QIAESLEFLHSNARLIHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAFHYA 237
QI++ +++L + +L+HR ++ NIL+ K+ FG + + S Q
Sbjct: 158 QISQGMQYL-AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPV 216
Query: 238 EYDVEDSMLPLQPSLNYTAPELVRSKTNSFGCSSDIFSFGCVAYHLI 284
++ +S+ + + SD++SFG + + ++
Sbjct: 217 KWMAIESLF-----------------DHIYTTQSDVWSFGVLLWEIV 246
>pdb|3VOF|A Chain A, Cellobiohydrolase Mutant, Cccel6c D102a, In The Closed
Form
Length = 395
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Query: 205 TSNGAW---KLGGFGFAISTDQAISDSSNVQAF 234
T G W + GFG +TDQAI DS+NV A
Sbjct: 292 TEWGQWCNIRNAGFGIRPTTDQAIVDSANVDAI 324
>pdb|3A64|A Chain A, Crystal Structure Of Cccel6c, A Glycoside Hydrolase Family
6 Enzyme, From Coprinopsis Cinerea
pdb|3A9B|A Chain A, Cccel6c, A Glycoside Hydrolase Family 6 Enzyme, Complexed
With Cellobiose
pdb|3ABX|A Chain A, Cccel6c, A Glycoside Hydrolase Family 6 Enzyme, Complexed
With P-Nitrophenyl Beta-D-Cellotrioside
Length = 395
Score = 29.6 bits (65), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Query: 205 TSNGAW---KLGGFGFAISTDQAISDSSNVQAF 234
T G W + GFG +TDQAI DS+NV A
Sbjct: 292 TEWGQWCNIRNAGFGIRPTTDQAIVDSANVDAI 324
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 29.6 bits (65), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 72/182 (39%), Gaps = 29/182 (15%)
Query: 177 LQIAESLEFLHSNARL--IHRAISPENILITSNGAWKLGGFGFAISTDQAISDSSNVQAF 234
+AE + + S RL +HR I P+NIL+ G +L FG + + V++
Sbjct: 166 FYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLK----LRADGTVRS- 220
Query: 235 HYAEYDVEDSMLPLQPSLNYTAPELVRSKTNSFGC-----SSDIFSFGCVAYHLIARKPL 289
L + +Y +PE++++ G D ++ G AY + +
Sbjct: 221 -----------LVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269
Query: 290 FDCNNNVKMYMNTLTYLSSDAF----SSIPSDLVPDLQKMLSANES--FRPTAMDFTGSR 343
F ++ + Y + Y + +P + +Q++L E+ R A DF
Sbjct: 270 FYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLCPPETRLGRGGAGDFRTHP 329
Query: 344 FF 345
FF
Sbjct: 330 FF 331
>pdb|3H0G|E Chain E, Rna Polymerase Ii From Schizosaccharomyces Pombe
pdb|3H0G|Q Chain Q, Rna Polymerase Ii From Schizosaccharomyces Pombe
Length = 210
Score = 29.3 bits (64), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 24/39 (61%)
Query: 430 PALFPVLSTASGETLLLLVKHADLIINKTSHEHLVSHVL 468
P+ +++T +G+ + + +DLI+N T HE + H+L
Sbjct: 112 PSAAKIIATVTGQFTIETFQESDLIVNITHHELVPKHIL 150
>pdb|1VI1|A Chain A, Crystal Structure Of A Fatty AcidPHOSPHOLIPID SYNTHESIS
PROTEIN
pdb|1VI1|B Chain B, Crystal Structure Of A Fatty AcidPHOSPHOLIPID SYNTHESIS
PROTEIN
Length = 345
Score = 29.3 bits (64), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 427 ITLPALFPVLSTASGETLLLLVKHADLIINKTSHEHLVSHVLPMLV---RAYGDTDPRI 482
I PAL P L T SG+ LLL A++ EHLV + + V + G T PR+
Sbjct: 120 IDRPALAPTLPTVSGDGFLLLDVGANV---DAKPEHLVQYAIXGSVYSQQVRGVTSPRV 175
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.131 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,233,804
Number of Sequences: 62578
Number of extensions: 721984
Number of successful extensions: 3377
Number of sequences better than 100.0: 990
Number of HSP's better than 100.0 without gapping: 265
Number of HSP's successfully gapped in prelim test: 725
Number of HSP's that attempted gapping in prelim test: 2690
Number of HSP's gapped (non-prelim): 1033
length of query: 849
length of database: 14,973,337
effective HSP length: 107
effective length of query: 742
effective length of database: 8,277,491
effective search space: 6141898322
effective search space used: 6141898322
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)