Query 045323
Match_columns 740
No_of_seqs 423 out of 4487
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 12:07:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045323.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045323hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 7E-61 1.5E-65 568.1 45.2 572 9-730 27-611 (968)
2 PLN00113 leucine-rich repeat r 100.0 4.6E-54 1E-58 509.9 36.1 517 109-730 70-588 (968)
3 KOG4194 Membrane glycoprotein 100.0 7.3E-38 1.6E-42 312.6 9.4 375 257-731 80-457 (873)
4 KOG4194 Membrane glycoprotein 100.0 3.5E-36 7.6E-41 300.6 5.0 371 232-676 79-450 (873)
5 KOG0472 Leucine-rich repeat pr 100.0 2.2E-39 4.8E-44 309.6 -17.1 465 108-702 45-541 (565)
6 KOG0472 Leucine-rich repeat pr 100.0 5.2E-38 1.1E-42 300.3 -15.0 485 132-726 44-541 (565)
7 KOG0618 Serine/threonine phosp 100.0 1.6E-33 3.5E-38 296.8 -4.8 303 108-490 21-323 (1081)
8 KOG0618 Serine/threonine phosp 100.0 1.1E-32 2.4E-37 290.6 -4.9 349 257-699 158-510 (1081)
9 KOG0444 Cytoskeletal regulator 100.0 1.8E-31 4E-36 268.7 -3.8 347 299-727 27-376 (1255)
10 KOG0444 Cytoskeletal regulator 100.0 7.1E-31 1.5E-35 264.5 -3.6 342 82-489 6-351 (1255)
11 PLN03210 Resistant to P. syrin 99.9 4.1E-22 9E-27 236.6 26.1 344 276-700 554-904 (1153)
12 KOG4237 Extracellular matrix p 99.9 3E-25 6.6E-30 212.9 -3.8 290 359-731 68-364 (498)
13 PLN03210 Resistant to P. syrin 99.9 2.3E-21 5.1E-26 230.2 27.0 270 250-550 629-905 (1153)
14 KOG4237 Extracellular matrix p 99.9 5.5E-25 1.2E-29 211.2 -4.7 291 108-467 67-359 (498)
15 PRK15387 E3 ubiquitin-protein 99.8 7.6E-20 1.7E-24 200.9 16.1 82 618-708 383-464 (788)
16 PRK15387 E3 ubiquitin-protein 99.8 1.3E-18 2.7E-23 191.4 17.1 63 618-685 403-465 (788)
17 PRK15370 E3 ubiquitin-protein 99.7 8.6E-18 1.9E-22 186.3 13.2 246 359-702 179-428 (754)
18 PRK15370 E3 ubiquitin-protein 99.7 1.8E-17 4E-22 183.7 12.9 183 407-678 242-428 (754)
19 cd00116 LRR_RI Leucine-rich re 99.7 4.2E-19 9E-24 183.9 -3.2 109 617-725 193-319 (319)
20 cd00116 LRR_RI Leucine-rich re 99.7 2.2E-18 4.8E-23 178.4 -2.3 86 616-701 220-319 (319)
21 KOG0617 Ras suppressor protein 99.6 8.5E-18 1.8E-22 143.2 -4.3 106 618-726 103-212 (264)
22 KOG0617 Ras suppressor protein 99.5 5.3E-17 1.1E-21 138.4 -6.5 184 452-708 31-218 (264)
23 PLN03150 hypothetical protein; 99.3 3E-12 6.4E-17 142.2 8.5 119 618-736 419-538 (623)
24 PLN03150 hypothetical protein; 99.3 2.9E-11 6.2E-16 134.4 13.3 143 7-194 368-527 (623)
25 KOG1259 Nischarin, modulator o 99.1 3E-11 6.4E-16 113.0 2.5 156 376-550 208-364 (490)
26 PF14580 LRR_9: Leucine-rich r 99.1 3.9E-11 8.4E-16 108.4 3.2 134 66-217 15-150 (175)
27 COG4886 Leucine-rich repeat (L 99.1 1.6E-10 3.4E-15 123.1 7.9 181 452-707 114-295 (394)
28 COG4886 Leucine-rich repeat (L 99.1 2.3E-10 5.1E-15 121.8 7.8 194 457-726 96-290 (394)
29 KOG1259 Nischarin, modulator o 99.1 5.9E-11 1.3E-15 111.1 2.3 132 514-706 284-416 (490)
30 KOG0532 Leucine-rich repeat (L 99.0 6.1E-12 1.3E-16 127.8 -5.4 188 412-676 81-271 (722)
31 KOG3207 Beta-tubulin folding c 99.0 3.6E-11 7.7E-16 118.6 -0.1 87 107-194 120-209 (505)
32 KOG0532 Leucine-rich repeat (L 99.0 5.5E-12 1.2E-16 128.1 -6.3 196 452-723 73-270 (722)
33 KOG1909 Ran GTPase-activating 99.0 2.7E-11 5.9E-16 116.2 -1.9 255 104-394 26-310 (382)
34 PF14580 LRR_9: Leucine-rich r 99.0 1.9E-10 4.1E-15 104.0 3.3 108 614-726 16-126 (175)
35 KOG3207 Beta-tubulin folding c 99.0 8.6E-11 1.9E-15 116.0 1.0 206 280-489 121-338 (505)
36 KOG1909 Ran GTPase-activating 98.9 4.2E-11 9.1E-16 115.0 -3.9 88 614-701 210-310 (382)
37 KOG0531 Protein phosphatase 1, 98.9 2.4E-10 5.3E-15 121.6 -1.5 226 426-707 91-323 (414)
38 PF13855 LRR_8: Leucine rich r 98.9 1.5E-09 3.3E-14 80.4 3.0 59 642-700 2-60 (61)
39 PF13855 LRR_8: Leucine rich r 98.8 3.7E-09 8.1E-14 78.3 3.6 61 617-677 1-61 (61)
40 KOG1859 Leucine-rich repeat pr 98.8 2.8E-10 6.1E-15 119.0 -4.2 117 611-732 181-298 (1096)
41 KOG2120 SCF ubiquitin ligase, 98.7 3.8E-10 8.2E-15 105.8 -5.6 195 134-332 186-390 (419)
42 KOG0531 Protein phosphatase 1, 98.7 2.1E-09 4.6E-14 114.4 -1.0 246 359-685 73-325 (414)
43 KOG4658 Apoptotic ATPase [Sign 98.7 7.5E-09 1.6E-13 117.6 2.8 89 102-193 565-653 (889)
44 KOG4658 Apoptotic ATPase [Sign 98.5 1E-07 2.2E-12 108.6 6.3 276 358-677 545-831 (889)
45 KOG2120 SCF ubiquitin ligase, 98.5 2.3E-09 4.9E-14 100.7 -6.8 181 256-440 186-373 (419)
46 KOG1859 Leucine-rich repeat pr 98.4 4.2E-09 9.1E-14 110.4 -8.3 81 109-195 165-245 (1096)
47 COG5238 RNA1 Ran GTPase-activa 98.2 2.5E-07 5.4E-12 86.1 0.3 38 304-341 242-284 (388)
48 KOG2982 Uncharacterized conser 98.2 5.3E-07 1.1E-11 85.1 1.7 86 106-192 69-156 (418)
49 KOG4579 Leucine-rich repeat (L 98.1 2.5E-07 5.5E-12 76.9 -2.6 110 616-730 52-163 (177)
50 COG5238 RNA1 Ran GTPase-activa 98.0 4.3E-07 9.4E-12 84.5 -2.7 134 250-396 115-256 (388)
51 KOG4341 F-box protein containi 98.0 2E-07 4.3E-12 92.2 -5.6 278 80-388 161-458 (483)
52 KOG3665 ZYG-1-like serine/thre 98.0 1.4E-06 3E-11 96.8 0.1 36 254-289 249-284 (699)
53 KOG2982 Uncharacterized conser 98.0 2.7E-06 5.7E-11 80.5 1.5 105 134-265 46-156 (418)
54 KOG4341 F-box protein containi 98.0 2.9E-07 6.3E-12 91.1 -5.3 38 380-417 399-437 (483)
55 KOG4579 Leucine-rich repeat (L 97.9 6E-07 1.3E-11 74.7 -2.8 105 618-725 28-135 (177)
56 PF12799 LRR_4: Leucine Rich r 97.9 7.8E-06 1.7E-10 55.1 2.0 36 642-678 2-37 (44)
57 KOG1644 U2-associated snRNP A' 97.8 6.1E-05 1.3E-09 67.6 6.3 106 108-216 42-149 (233)
58 PF12799 LRR_4: Leucine Rich r 97.7 3.8E-05 8.2E-10 51.8 3.8 36 109-146 2-37 (44)
59 KOG3665 ZYG-1-like serine/thre 97.7 9.3E-06 2E-10 90.3 1.4 134 81-216 120-259 (699)
60 PRK15386 type III secretion pr 97.7 0.00015 3.2E-09 74.3 8.7 75 450-549 48-123 (426)
61 KOG1644 U2-associated snRNP A' 97.7 5.1E-05 1.1E-09 68.1 4.5 83 641-725 42-125 (233)
62 PRK15386 type III secretion pr 97.5 0.00027 5.9E-09 72.4 8.4 62 476-556 51-112 (426)
63 KOG2739 Leucine-rich acidic nu 97.1 0.00019 4.1E-09 67.5 1.4 93 98-195 33-129 (260)
64 PF13306 LRR_5: Leucine rich r 97.0 0.0028 6.2E-08 55.2 7.6 76 377-456 53-128 (129)
65 PF13306 LRR_5: Leucine rich r 97.0 0.0025 5.4E-08 55.6 7.1 124 508-692 6-129 (129)
66 KOG1947 Leucine rich repeat pr 96.5 0.00041 8.8E-09 76.4 -1.9 64 130-193 240-306 (482)
67 PF08263 LRRNT_2: Leucine rich 96.3 0.0048 1E-07 41.4 3.1 28 10-37 2-43 (43)
68 KOG2123 Uncharacterized conser 96.2 0.0002 4.2E-09 67.6 -5.1 80 452-544 39-123 (388)
69 KOG1947 Leucine rich repeat pr 96.1 0.00069 1.5E-08 74.6 -2.7 189 254-456 187-389 (482)
70 KOG2739 Leucine-rich acidic nu 96.0 0.004 8.6E-08 58.8 2.5 105 616-722 42-152 (260)
71 KOG2123 Uncharacterized conser 95.9 0.00025 5.4E-09 66.9 -5.9 80 109-193 20-99 (388)
72 PF00560 LRR_1: Leucine Rich R 94.2 0.016 3.5E-07 32.2 0.4 7 670-676 5-11 (22)
73 PF00560 LRR_1: Leucine Rich R 94.1 0.025 5.5E-07 31.4 1.0 12 135-146 2-13 (22)
74 KOG3864 Uncharacterized conser 92.9 0.019 4.1E-07 52.1 -1.2 83 618-700 102-187 (221)
75 KOG4308 LRR-containing protein 92.3 0.0012 2.6E-08 70.5 -11.4 61 619-679 235-304 (478)
76 PF13504 LRR_7: Leucine rich r 91.2 0.11 2.5E-06 26.7 1.0 11 667-677 3-13 (17)
77 smart00369 LRR_TYP Leucine-ric 90.1 0.18 3.8E-06 29.3 1.3 20 689-708 2-21 (26)
78 smart00370 LRR Leucine-rich re 90.1 0.18 3.8E-06 29.3 1.3 20 689-708 2-21 (26)
79 KOG4308 LRR-containing protein 89.4 0.0033 7.1E-08 67.3 -11.4 36 257-292 89-127 (478)
80 smart00370 LRR Leucine-rich re 89.3 0.29 6.2E-06 28.4 1.8 13 666-678 3-15 (26)
81 smart00369 LRR_TYP Leucine-ric 89.3 0.29 6.2E-06 28.4 1.8 13 666-678 3-15 (26)
82 KOG0473 Leucine-rich repeat pr 88.3 0.023 5E-07 52.6 -5.0 85 637-724 38-122 (326)
83 KOG0473 Leucine-rich repeat pr 85.2 0.027 5.9E-07 52.1 -6.3 85 615-702 40-124 (326)
84 PF13516 LRR_6: Leucine Rich r 83.3 0.46 9.9E-06 26.9 0.5 19 617-635 2-20 (24)
85 KOG3864 Uncharacterized conser 81.2 0.55 1.2E-05 43.0 0.4 84 41-143 101-186 (221)
86 KOG4242 Predicted myosin-I-bin 77.5 9.6 0.00021 39.9 7.8 61 618-678 414-481 (553)
87 smart00365 LRR_SD22 Leucine-ri 76.3 1.6 3.5E-05 25.4 1.2 19 70-88 2-20 (26)
88 KOG3763 mRNA export factor TAP 75.5 1.3 2.8E-05 47.0 1.1 62 640-703 217-284 (585)
89 smart00364 LRR_BAC Leucine-ric 65.4 4.5 9.7E-05 23.5 1.4 13 666-678 3-15 (26)
90 smart00082 LRRCT Leucine rich 62.3 3.5 7.7E-05 28.5 0.8 10 723-732 1-10 (51)
91 smart00368 LRR_RI Leucine rich 60.3 7 0.00015 23.1 1.7 14 665-678 2-15 (28)
92 KOG4242 Predicted myosin-I-bin 48.6 1.2E+02 0.0026 32.2 9.2 37 381-419 164-200 (553)
93 KOG3763 mRNA export factor TAP 41.6 20 0.00044 38.4 2.7 83 253-335 216-307 (585)
94 smart00367 LRR_CC Leucine-rich 35.3 27 0.00058 20.0 1.4 13 156-168 1-13 (26)
95 TIGR00864 PCC polycystin catio 21.6 50 0.0011 43.2 1.7 32 623-654 1-32 (2740)
96 TIGR00864 PCC polycystin catio 21.5 50 0.0011 43.1 1.7 33 647-679 1-33 (2740)
97 KOG1665 AFH1-interacting prote 21.3 84 0.0018 29.4 2.6 152 42-269 132-285 (302)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=7e-61 Score=568.08 Aligned_cols=572 Identities=33% Similarity=0.479 Sum_probs=419.1
Q ss_pred cHHHHHHHHHHhhc----------CC-CCCCccccceEecCCCCceEEEECCCCCCCCCCCccccccccccccccceeeC
Q 045323 9 LEQEGYALLKLKHD----------FF-NNHCCQWACVECNTTTGKVISLDLDGTRKLGDGEGYLNASLFTSFQQLELLDL 77 (740)
Q Consensus 9 ~~~~~~~~~~~~~~----------~~-~~~~c~~~~~~c~~~~~~v~~ldl~~~~~~~~~~~~l~~~~f~~~~~L~~Ldl 77 (740)
.++|+.|+++||++ |. .++||.|.|+.|.. .++|+.+|++++.+.. ..+..|..+++|++||+
T Consensus 27 ~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~c~w~gv~c~~-~~~v~~L~L~~~~i~~-----~~~~~~~~l~~L~~L~L 100 (968)
T PLN00113 27 HAEELELLLSFKSSINDPLKYLSNWNSSADVCLWQGITCNN-SSRVVSIDLSGKNISG-----KISSAIFRLPYIQTINL 100 (968)
T ss_pred CHHHHHHHHHHHHhCCCCcccCCCCCCCCCCCcCcceecCC-CCcEEEEEecCCCccc-----cCChHHhCCCCCCEEEC
Confidence 45788899999876 65 67899999999986 5699999999987732 22445666777666666
Q ss_pred CCCCCCCCcEEeCCCCCCcCcccchhc-ccCCCCCEEECCCCCCCCccChhhhcCCCCCCEEEccCCcccccccccCcCC
Q 045323 78 SILNFKNLEYFNMDFCTAFSNSFLQMS-ELMASLKYLSLSNSYLNGTILDQGLCELVYLQEVNIDRNNLSGSLPWCLANL 156 (740)
Q Consensus 78 s~~~l~~L~~L~l~~~~~~~~~~~~~l-~~l~~L~~L~Ls~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l 156 (740)
+++++ .+.+|..+ ..+++|++|++++|.+++.+|. ..+++|++|++++|.+++..|..++++
T Consensus 101 s~n~~--------------~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~---~~l~~L~~L~Ls~n~~~~~~p~~~~~l 163 (968)
T PLN00113 101 SNNQL--------------SGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR---GSIPNLETLDLSNNMLSGEIPNDIGSF 163 (968)
T ss_pred CCCcc--------------CCcCChHHhccCCCCCEEECcCCccccccCc---cccCCCCEEECcCCcccccCChHHhcC
Confidence 65543 34445443 3678888888888887766653 457778888888888877777778888
Q ss_pred CCCCEEEcCCCCCCCCCCccccCCCCCCCEEeccCCcccccCCccccccCCCccEEeCCCccccccccCCCCCCccccEE
Q 045323 157 TYLRLLDVSFNQLTENISSSPLMNLTYIEELWLSNNHFQISISLEPFFNHSKLKFFDGDIYAEIETSHSSLTPKFQLTSI 236 (740)
Q Consensus 157 ~~L~~L~l~~n~l~~~i~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L 236 (740)
++|++|++++|.+.+.+|. .+.++++|++|++++|.+.+
T Consensus 164 ~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~L~~n~l~~---------------------------------------- 202 (968)
T PLN00113 164 SSLKVLDLGGNVLVGKIPN-SLTNLTSLEFLTLASNQLVG---------------------------------------- 202 (968)
T ss_pred CCCCEEECccCcccccCCh-hhhhCcCCCeeeccCCCCcC----------------------------------------
Confidence 8888888888877766666 67777788888877776653
Q ss_pred EecCCCCCCCCChhhcCCCCCCEEEcCCCCCCCCCChhHHhcCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCcc
Q 045323 237 SLFGHGDSGIFPKFLYHQHDLEYVDLSHLNLTREFPNWLLEKNKKLKRLSLVNISLFGPFPLPIHCHKNLRVLDVSNNKL 316 (740)
Q Consensus 237 ~l~~~~~~~~~~~~l~~l~~L~~L~L~~~~~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~L~~L~l~~~~l 316 (740)
.+|..++++++|++|++++|++.+.+|..+ ..+++|++|++++|.+.+..|..+..+++|++|++++|.+
T Consensus 203 ---------~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l-~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l 272 (968)
T PLN00113 203 ---------QIPRELGQMKSLKWIYLGYNNLSGEIPYEI-GGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKL 272 (968)
T ss_pred ---------cCChHHcCcCCccEEECcCCccCCcCChhH-hcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCee
Confidence 234445555555555555555555555543 4555555555555555555555555566666666666666
Q ss_pred cccCchhhhhcCCCCcEEeccCCcccccCCCCccCcCccccCCccEEEccCCCCCCcCcccccCCCCCCeeecCCCccee
Q 045323 317 QGHIPIEIGEVLPNLVVLNVATNAFNGSIPSSFGNTWPWGCFYLEYLVLSNNSLQGQLFSKEFNLTKLKRLNLDGNHFIG 396 (740)
Q Consensus 317 ~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~ 396 (740)
.+.+|..+.. +++|+.|++++|.+.+..|..+..+. +|++|++++|.+.+..+..+..+++|+.|++++|.+.+
T Consensus 273 ~~~~p~~l~~-l~~L~~L~Ls~n~l~~~~p~~~~~l~-----~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 346 (968)
T PLN00113 273 SGPIPPSIFS-LQKLISLDLSDNSLSGEIPELVIQLQ-----NLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSG 346 (968)
T ss_pred eccCchhHhh-ccCcCEEECcCCeeccCCChhHcCCC-----CCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcC
Confidence 5555555544 56666666666666655555555443 56666666666666666666666667777777666666
Q ss_pred cCCcCCCCCCCCceEeCCCcccccCCCcCCCCCCCCCEEeCCCCcCcCCchhhhcCCCCCCEEECCCCcCcccCCCCC-C
Q 045323 397 DIPKTLSNCSALQGLYISDNNISGNIPTRLGNLSFLDAIMMPNNRLEGPIPSAFCQLRHLEILDLSRNNISGSLPSCS-S 475 (740)
Q Consensus 397 ~~~~~l~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~-~ 475 (740)
..|..+..+++|+.|++++|.+.+..|..+..+++|+.|++++|.+.+..|..+..+++|+.|++++|.+.+..|... .
T Consensus 347 ~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~ 426 (968)
T PLN00113 347 EIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTK 426 (968)
T ss_pred cCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhc
Confidence 666666666667777777776666666666666677777777777666666666677777777777777665555433 3
Q ss_pred CCcccEEEcCCCcccCcCccccCCCcCCCCCCcccCCCCCCcEEecccCcccccCCccccCCCCCCEEEccCCcCcCCCC
Q 045323 476 PFNIRRVHLSKNMLQGPLLGDLSYNRLNSNIPDWMNRLPQLRYLILANNGLEGEMPLQLCWLNKLQLVDLSHNNLSGQIP 555 (740)
Q Consensus 476 ~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p 555 (740)
++.|+.|++++|.+++ .++..+..+++|+.|++++|.+.+..|..+ ..++|+.|++++|++.+.+|
T Consensus 427 l~~L~~L~Ls~N~l~~-------------~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~ 492 (968)
T PLN00113 427 LPLVYFLDISNNNLQG-------------RINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVP 492 (968)
T ss_pred CCCCCEEECcCCcccC-------------ccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccC
Confidence 6667777776666543 445556678899999999999887777655 46899999999999987777
Q ss_pred ccccccccccccCCCCccCCCchhhccchhhHHhhhcccccceeeeeeeccccceeecccCCCccEEEcccCcccccChh
Q 045323 556 HCLYNISFNYREDNHDLFDQDPQILYQLPQLQILYTNYHNHKYLTNFTTKQRLYTYEVQPLHSMSGLDLSCNKLIGEIPL 635 (740)
Q Consensus 556 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~ 635 (740)
..+.++ ++|+.|++++|++.+.+|.
T Consensus 493 ~~~~~l-------------------------------------------------------~~L~~L~Ls~N~l~~~~p~ 517 (968)
T PLN00113 493 RKLGSL-------------------------------------------------------SELMQLKLSENKLSGEIPD 517 (968)
T ss_pred hhhhhh-------------------------------------------------------hccCEEECcCCcceeeCCh
Confidence 654433 3889999999999999999
Q ss_pred hhhcCCCCcEEECcCCcCcccCCccccCCCCCCEEeCCCCccCccCCcccccCCcCceeeccCcccccCCCCcccCCCCc
Q 045323 636 QIGELSRIHTLNLSHNNLTGESPVTFSHMKQVESLDLSYNNLNGKIPPRLIELNALAVFSVAFNNLSGKTPDRVAQFGTF 715 (740)
Q Consensus 636 ~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~~~~l 715 (740)
.+..+++|++|+|++|.+++.+|..|+.+++|+.|+|++|++++.+|..+..+++|+.|++++|++.+.+|.. +.+.++
T Consensus 518 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~-~~~~~~ 596 (968)
T PLN00113 518 ELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPST-GAFLAI 596 (968)
T ss_pred HHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCc-chhccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999985 788888
Q ss_pred cccccccCCCCCCcC
Q 045323 716 EEDSYEGNPFLCGQP 730 (740)
Q Consensus 716 ~~l~l~~Np~~c~~~ 730 (740)
...++.|||..|+-.
T Consensus 597 ~~~~~~~n~~lc~~~ 611 (968)
T PLN00113 597 NASAVAGNIDLCGGD 611 (968)
T ss_pred ChhhhcCCccccCCc
Confidence 999999999999754
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=4.6e-54 Score=509.85 Aligned_cols=517 Identities=32% Similarity=0.468 Sum_probs=427.8
Q ss_pred CCCEEECCCCCCCCccChhhhcCCCCCCEEEccCCcccccccccC-cCCCCCCEEEcCCCCCCCCCCccccCCCCCCCEE
Q 045323 109 SLKYLSLSNSYLNGTILDQGLCELVYLQEVNIDRNNLSGSLPWCL-ANLTYLRLLDVSFNQLTENISSSPLMNLTYIEEL 187 (740)
Q Consensus 109 ~L~~L~Ls~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l-~~l~~L~~L~l~~n~l~~~i~~~~l~~l~~L~~L 187 (740)
+++.|++++|.+.+.++. .|..+++|++|+|++|.+.+.+|..+ ..+++|++|++++|.+++.+|. ..+++|++|
T Consensus 70 ~v~~L~L~~~~i~~~~~~-~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~---~~l~~L~~L 145 (968)
T PLN00113 70 RVVSIDLSGKNISGKISS-AIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR---GSIPNLETL 145 (968)
T ss_pred cEEEEEecCCCccccCCh-HHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc---cccCCCCEE
Confidence 455666666655544443 55566666666666666554444433 3556666666666665554443 335556666
Q ss_pred eccCCcccccCCccccccCCCccEEeCCCccccccccCCCCCCccccEEEecCCCCCCCCChhhcCCCCCCEEEcCCCCC
Q 045323 188 WLSNNHFQISISLEPFFNHSKLKFFDGDIYAEIETSHSSLTPKFQLTSISLFGHGDSGIFPKFLYHQHDLEYVDLSHLNL 267 (740)
Q Consensus 188 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~L~~~~~ 267 (740)
++++|.+.+.++. .+. .+.+|+.|++++|.+.+.+|..+.++++|++|++++|.+
T Consensus 146 ~Ls~n~~~~~~p~-~~~------------------------~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l 200 (968)
T PLN00113 146 DLSNNMLSGEIPN-DIG------------------------SFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQL 200 (968)
T ss_pred ECcCCcccccCCh-HHh------------------------cCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCC
Confidence 6666655432221 111 222555555555555566788889999999999999999
Q ss_pred CCCCChhHHhcCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCcccccCchhhhhcCCCCcEEeccCCcccccCCC
Q 045323 268 TREFPNWLLEKNKKLKRLSLVNISLFGPFPLPIHCHKNLRVLDVSNNKLQGHIPIEIGEVLPNLVVLNVATNAFNGSIPS 347 (740)
Q Consensus 268 ~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 347 (740)
.+.+|..+ ..+++|++|++++|.+....|..+..+++|++|++++|.+++.+|..+.. +++|+.|++++|.+.+..|.
T Consensus 201 ~~~~p~~l-~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~-l~~L~~L~L~~n~l~~~~p~ 278 (968)
T PLN00113 201 VGQIPREL-GQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGN-LKNLQYLFLYQNKLSGPIPP 278 (968)
T ss_pred cCcCChHH-cCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhC-CCCCCEEECcCCeeeccCch
Confidence 98888875 78999999999999998888888999999999999999998888887776 89999999999999888888
Q ss_pred CccCcCccccCCccEEEccCCCCCCcCcccccCCCCCCeeecCCCcceecCCcCCCCCCCCceEeCCCcccccCCCcCCC
Q 045323 348 SFGNTWPWGCFYLEYLVLSNNSLQGQLFSKEFNLTKLKRLNLDGNHFIGDIPKTLSNCSALQGLYISDNNISGNIPTRLG 427 (740)
Q Consensus 348 ~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~i~~~~~~~~~ 427 (740)
.+..+. +|++|++++|.+.+..|..+..+++|+.|++++|.+.+..|..+..+++|+.|++++|.+.+..|..+.
T Consensus 279 ~l~~l~-----~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~ 353 (968)
T PLN00113 279 SIFSLQ-----KLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLG 353 (968)
T ss_pred hHhhcc-----CcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHh
Confidence 877655 799999999999988888888999999999999999988888889999999999999999988899999
Q ss_pred CCCCCCEEeCCCCcCcCCchhhhcCCCCCCEEECCCCcCcccCCCC-CCCCcccEEEcCCCcccCcCccccCCCcCCCCC
Q 045323 428 NLSFLDAIMMPNNRLEGPIPSAFCQLRHLEILDLSRNNISGSLPSC-SSPFNIRRVHLSKNMLQGPLLGDLSYNRLNSNI 506 (740)
Q Consensus 428 ~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~-~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~ 506 (740)
.+++|+.|++++|.+.+..|..+..+++|+.|++++|.+.+..|.. ..+++|+.|++++|++++ .+
T Consensus 354 ~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~-------------~~ 420 (968)
T PLN00113 354 KHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSG-------------EL 420 (968)
T ss_pred CCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeee-------------EC
Confidence 9999999999999999888999999999999999999998777764 448899999999988763 56
Q ss_pred CcccCCCCCCcEEecccCcccccCCccccCCCCCCEEEccCCcCcCCCCccccccccccccCCCCccCCCchhhccchhh
Q 045323 507 PDWMNRLPQLRYLILANNGLEGEMPLQLCWLNKLQLVDLSHNNLSGQIPHCLYNISFNYREDNHDLFDQDPQILYQLPQL 586 (740)
Q Consensus 507 ~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~L 586 (740)
|..+..+++|+.|++++|.+.+..+..+..+++|+.|++++|++.+.+|..+.
T Consensus 421 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~--------------------------- 473 (968)
T PLN00113 421 PSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFG--------------------------- 473 (968)
T ss_pred ChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccc---------------------------
Confidence 77788899999999999999988888888899999999999998876664321
Q ss_pred HHhhhcccccceeeeeeeccccceeecccCCCccEEEcccCcccccChhhhhcCCCCcEEECcCCcCcccCCccccCCCC
Q 045323 587 QILYTNYHNHKYLTNFTTKQRLYTYEVQPLHSMSGLDLSCNKLIGEIPLQIGELSRIHTLNLSHNNLTGESPVTFSHMKQ 666 (740)
Q Consensus 587 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~ 666 (740)
.++|+.||+++|++.+..|..+..+++|+.|+|++|++++.+|..+..+++
T Consensus 474 -----------------------------~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 524 (968)
T PLN00113 474 -----------------------------SKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKK 524 (968)
T ss_pred -----------------------------cccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccC
Confidence 137999999999999999999999999999999999999999999999999
Q ss_pred CCEEeCCCCccCccCCcccccCCcCceeeccCcccccCCCCcccCCCCccccccccCCCCCCcC
Q 045323 667 VESLDLSYNNLNGKIPPRLIELNALAVFSVAFNNLSGKTPDRVAQFGTFEEDSYEGNPFLCGQP 730 (740)
Q Consensus 667 L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~~~~l~~l~l~~Np~~c~~~ 730 (740)
|++|+|++|.+++.+|..+..+++|+.|++++|++++.+|..+..+++|+.+++++|++.+..|
T Consensus 525 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p 588 (968)
T PLN00113 525 LVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588 (968)
T ss_pred CCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCC
Confidence 9999999999999999999999999999999999999999999999999999999999988665
No 3
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-38 Score=312.57 Aligned_cols=375 Identities=22% Similarity=0.238 Sum_probs=264.8
Q ss_pred CCEEEcCCCCCCCCCChhHHhcCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCcccccCchhhhhcCCCCcEEec
Q 045323 257 LEYVDLSHLNLTREFPNWLLEKNKKLKRLSLVNISLFGPFPLPIHCHKNLRVLDVSNNKLQGHIPIEIGEVLPNLVVLNV 336 (740)
Q Consensus 257 L~~L~L~~~~~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~L~~L~l 336 (740)
-+.|++++|.+...-+ .+|.++++|+++++..|.++ .+|.......+|+.|++.+|.|+ .+...-...++.|+.||+
T Consensus 80 t~~LdlsnNkl~~id~-~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~-sv~se~L~~l~alrslDL 156 (873)
T KOG4194|consen 80 TQTLDLSNNKLSHIDF-EFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLIS-SVTSEELSALPALRSLDL 156 (873)
T ss_pred eeeeeccccccccCcH-HHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccc-cccHHHHHhHhhhhhhhh
Confidence 4557777777663333 33456777777777766654 33433334445777777777666 444433344667777777
Q ss_pred cCCcccccCCCCccCcCccccCCccEEEccCCCCCCcCcccccCCCCCCeeecCCCcceecCCcCCCCCCCCceEeCCCc
Q 045323 337 ATNAFNGSIPSSFGNTWPWGCFYLEYLVLSNNSLQGQLFSKEFNLTKLKRLNLDGNHFIGDIPKTLSNCSALQGLYISDN 416 (740)
Q Consensus 337 ~~n~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n 416 (740)
+.|.++......|..-. ++++|++++|.|+......|.++.+|..|.|+.|.++...+..|..+++|+.|++..|
T Consensus 157 SrN~is~i~~~sfp~~~-----ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN 231 (873)
T KOG4194|consen 157 SRNLISEIPKPSFPAKV-----NIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRN 231 (873)
T ss_pred hhchhhcccCCCCCCCC-----CceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhcccc
Confidence 77766643333443322 5666777777666666666666666666666666666555556666666666666666
Q ss_pred ccccCCCcCCCCCCCCCEEeCCCCcCcCCchhhhcCCCCCCEEECCCCcCcccCCCCCCCCcccEEEcCCCcccCcCccc
Q 045323 417 NISGNIPTRLGNLSFLDAIMMPNNRLEGPIPSAFCQLRHLEILDLSRNNISGSLPSCSSPFNIRRVHLSKNMLQGPLLGD 496 (740)
Q Consensus 417 ~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~ 496 (740)
+|.-.-...|..+++|+.|.+..|.+......+|..+.++++|+++.|++..
T Consensus 232 ~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~---------------------------- 283 (873)
T KOG4194|consen 232 RIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQA---------------------------- 283 (873)
T ss_pred ceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhh----------------------------
Confidence 6653334455666666666666666655555556666666666666655541
Q ss_pred cCCCcCCCCCCcccCCCCCCcEEecccCcccccCCccccCCCCCCEEEccCCcCcCCCCccccccccccccCCCCccCCC
Q 045323 497 LSYNRLNSNIPDWMNRLPQLRYLILANNGLEGEMPLQLCWLNKLQLVDLSHNNLSGQIPHCLYNISFNYREDNHDLFDQD 576 (740)
Q Consensus 497 l~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~~~~~~~~~~~~~~ 576 (740)
.-..++.++++|+.|++|+|.|...-+..++.+++|+.|+++.|.++...+..|..
T Consensus 284 --------vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~---------------- 339 (873)
T KOG4194|consen 284 --------VNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRV---------------- 339 (873)
T ss_pred --------hhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHH----------------
Confidence 22345667888888999999888777777888889999999999887443333322
Q ss_pred chhhccchhhHHhhhcccccceeeeeeeccccceeecccCCCccEEEcccCcccccChhhhhcCCCCcEEECcCCcCccc
Q 045323 577 PQILYQLPQLQILYTNYHNHKYLTNFTTKQRLYTYEVQPLHSMSGLDLSCNKLIGEIPLQIGELSRIHTLNLSHNNLTGE 656 (740)
Q Consensus 577 ~~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 656 (740)
++.|++|++++|.+.......|..+++|++|||++|.+...
T Consensus 340 ---------------------------------------L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~ 380 (873)
T KOG4194|consen 340 ---------------------------------------LSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWC 380 (873)
T ss_pred ---------------------------------------HHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEE
Confidence 23777888999998877777799999999999999998876
Q ss_pred CC---ccccCCCCCCEEeCCCCccCccCCcccccCCcCceeeccCcccccCCCCcccCCCCccccccccCCCCCCcCC
Q 045323 657 SP---VTFSHMKQVESLDLSYNNLNGKIPPRLIELNALAVFSVAFNNLSGKTPDRVAQFGTFEEDSYEGNPFLCGQPL 731 (740)
Q Consensus 657 ~~---~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~~~~l~~l~l~~Np~~c~~~l 731 (740)
+. ..|..+++|+.|+|.+|++..+....|..+..|+.|||.+|.+..+.|..|..+ .|.+|-+..-.++|||.+
T Consensus 381 IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSssflCDCql 457 (873)
T KOG4194|consen 381 IEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSSSFLCDCQL 457 (873)
T ss_pred EecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcccceEEeccH
Confidence 53 467889999999999999997667899999999999999999999999999999 999999999999999985
No 4
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-36 Score=300.62 Aligned_cols=371 Identities=25% Similarity=0.241 Sum_probs=322.9
Q ss_pred cccEEEecCCCCCCCCChhhcCCCCCCEEEcCCCCCCCCCChhHHhcCCCCCEEEccCCcccccCCCCCCCCCCCCEEEc
Q 045323 232 QLTSISLFGHGDSGIFPKFLYHQHDLEYVDLSHLNLTREFPNWLLEKNKKLKRLSLVNISLFGPFPLPIHCHKNLRVLDV 311 (740)
Q Consensus 232 ~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~L~~~~~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~L~~L~l 311 (740)
.-+.|++++|.+..+-+..+.++++|+++++.+|.++ .+|... .....++.|+|.+|.+.....+.++.++.|+.||+
T Consensus 79 ~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~-~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDL 156 (873)
T KOG4194|consen 79 QTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFG-HESGHLEKLDLRHNLISSVTSEELSALPALRSLDL 156 (873)
T ss_pred ceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hccccc-ccccceeEEeeeccccccccHHHHHhHhhhhhhhh
Confidence 6778999999999999999999999999999999998 788743 44566999999999998888888999999999999
Q ss_pred cCCcccccCchhhhhcCCCCcEEeccCCcccccCCCCccCcCccccCCccEEEccCCCCCCcCcccccCCCCCCeeecCC
Q 045323 312 SNNKLQGHIPIEIGEVLPNLVVLNVATNAFNGSIPSSFGNTWPWGCFYLEYLVLSNNSLQGQLFSKEFNLTKLKRLNLDG 391 (740)
Q Consensus 312 ~~~~l~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 391 (740)
+.|.|+ .+|...+..-+++++|++++|.++......|..+. +|.+|.++.|+++...+..|.++++|+.|+|..
T Consensus 157 SrN~is-~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~ln-----sL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnr 230 (873)
T KOG4194|consen 157 SRNLIS-EIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLN-----SLLTLKLSRNRITTLPQRSFKRLPKLESLDLNR 230 (873)
T ss_pred hhchhh-cccCCCCCCCCCceEEeeccccccccccccccccc-----hheeeecccCcccccCHHHhhhcchhhhhhccc
Confidence 999998 77776666557999999999999988888888766 899999999999988888999999999999999
Q ss_pred CcceecCCcCCCCCCCCceEeCCCcccccCCCcCCCCCCCCCEEeCCCCcCcCCchhhhcCCCCCCEEECCCCcCcccCC
Q 045323 392 NHFIGDIPKTLSNCSALQGLYISDNNISGNIPTRLGNLSFLDAIMMPNNRLEGPIPSAFCQLRHLEILDLSRNNISGSLP 471 (740)
Q Consensus 392 n~~~~~~~~~l~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~ 471 (740)
|.+.-.---.|.++++|+.|.+..|.|......+|..+.++++|+|+.|++.......+.++++|+.|++++|.|...-+
T Consensus 231 N~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~ 310 (873)
T KOG4194|consen 231 NRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHI 310 (873)
T ss_pred cceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeec
Confidence 99876556678999999999999999998878899999999999999999998888899999999999999999987766
Q ss_pred CCCC-CCcccEEEcCCCcccCcCccccCCCcCCCCCCcccCCCCCCcEEecccCcccccCCccccCCCCCCEEEccCCcC
Q 045323 472 SCSS-PFNIRRVHLSKNMLQGPLLGDLSYNRLNSNIPDWMNRLPQLRYLILANNGLEGEMPLQLCWLNKLQLVDLSHNNL 550 (740)
Q Consensus 472 ~~~~-~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~~ 550 (740)
+.+. +++|++|+++.|+|+. .-+..|..+..|++|+++.|+++..-..+|..+++|+.||++.|.+
T Consensus 311 d~WsftqkL~~LdLs~N~i~~-------------l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~l 377 (873)
T KOG4194|consen 311 DSWSFTQKLKELDLSSNRITR-------------LDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNEL 377 (873)
T ss_pred chhhhcccceeEecccccccc-------------CChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeE
Confidence 6555 8999999999988762 3456678889999999999999988788899999999999999988
Q ss_pred cCCCCccccccccccccCCCCccCCCchhhccchhhHHhhhcccccceeeeeeeccccceeecccCCCccEEEcccCccc
Q 045323 551 SGQIPHCLYNISFNYREDNHDLFDQDPQILYQLPQLQILYTNYHNHKYLTNFTTKQRLYTYEVQPLHSMSGLDLSCNKLI 630 (740)
Q Consensus 551 ~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~ 630 (740)
+..+-+ ....+..+++|+.|++.+|++.
T Consensus 378 s~~IED----------------------------------------------------aa~~f~gl~~LrkL~l~gNqlk 405 (873)
T KOG4194|consen 378 SWCIED----------------------------------------------------AAVAFNGLPSLRKLRLTGNQLK 405 (873)
T ss_pred EEEEec----------------------------------------------------chhhhccchhhhheeecCceee
Confidence 643321 0112344668888999999999
Q ss_pred ccChhhhhcCCCCcEEECcCCcCcccCCccccCCCCCCEEeCCCCc
Q 045323 631 GEIPLQIGELSRIHTLNLSHNNLTGESPVTFSHMKQVESLDLSYNN 676 (740)
Q Consensus 631 ~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~n~ 676 (740)
.+...+|.++..|++|||.+|.|..+.|.+|..+ .|++|.+..-.
T Consensus 406 ~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSss 450 (873)
T KOG4194|consen 406 SIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSSS 450 (873)
T ss_pred ecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcccc
Confidence 7777889999999999999999999999999998 89988776443
No 5
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=2.2e-39 Score=309.61 Aligned_cols=465 Identities=28% Similarity=0.391 Sum_probs=247.2
Q ss_pred CCCCEEECCCCCCCCccChhhhcCCCCCCEEEccCCcccccccccCcCCCCCCEEEcCCCCCCCCCCccccCCCCCCCEE
Q 045323 108 ASLKYLSLSNSYLNGTILDQGLCELVYLQEVNIDRNNLSGSLPWCLANLTYLRLLDVSFNQLTENISSSPLMNLTYIEEL 187 (740)
Q Consensus 108 ~~L~~L~Ls~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~i~~~~l~~l~~L~~L 187 (740)
..|..+.+++|.+. .+.+ ++.++..|.+|++++|+++ ..|.+++.+..++.++.++|+++. +|+ .+..+.+++.+
T Consensus 45 v~l~~lils~N~l~-~l~~-dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls~-lp~-~i~s~~~l~~l 119 (565)
T KOG0472|consen 45 VDLQKLILSHNDLE-VLRE-DLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLSE-LPE-QIGSLISLVKL 119 (565)
T ss_pred cchhhhhhccCchh-hccH-hhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHhh-ccH-HHhhhhhhhhh
Confidence 34666777777765 3333 6777777777777777776 466667777777777777777754 666 67777777777
Q ss_pred eccCCcccccCCccccccCCCccEEeCCCccccccccCCCCCCccccEEEecCCCCCCCCChhhcCCCCCCEEEcCCCCC
Q 045323 188 WLSNNHFQISISLEPFFNHSKLKFFDGDIYAEIETSHSSLTPKFQLTSISLFGHGDSGIFPKFLYHQHDLEYVDLSHLNL 267 (740)
Q Consensus 188 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~L~~~~~ 267 (740)
+.+.|.+.. .++.++.+..+..++..+|++
T Consensus 120 ~~s~n~~~e--------------------------------------------------l~~~i~~~~~l~dl~~~~N~i 149 (565)
T KOG0472|consen 120 DCSSNELKE--------------------------------------------------LPDSIGRLLDLEDLDATNNQI 149 (565)
T ss_pred hccccceee--------------------------------------------------cCchHHHHhhhhhhhcccccc
Confidence 777776541 223333444455555555555
Q ss_pred CCCCChhHHhcCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCcccccCchhhhhcCCCCcEEeccCCcccccCCC
Q 045323 268 TREFPNWLLEKNKKLKRLSLVNISLFGPFPLPIHCHKNLRVLDVSNNKLQGHIPIEIGEVLPNLVVLNVATNAFNGSIPS 347 (740)
Q Consensus 268 ~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 347 (740)
. ..|..+ ..+.++..+++.++.+....+..+. ++.|++||+..|.++ .+|..++. +.+|..|++..|++. ..|
T Consensus 150 ~-slp~~~-~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP~~lg~-l~~L~~LyL~~Nki~-~lP- 222 (565)
T KOG0472|consen 150 S-SLPEDM-VNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLPPELGG-LESLELLYLRRNKIR-FLP- 222 (565)
T ss_pred c-cCchHH-HHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cCChhhcc-hhhhHHHHhhhcccc-cCC-
Confidence 4 344443 2445555555555555433333333 556666666666655 66666655 566666666666665 344
Q ss_pred CccCcCccccCCccEEEccCCCCCCcCcccccCCCCCCeeecCCCcceecCCcCCCCCCCCceEeCCCcccccCCCcCCC
Q 045323 348 SFGNTWPWGCFYLEYLVLSNNSLQGQLFSKEFNLTKLKRLNLDGNHFIGDIPKTLSNCSALQGLYISDNNISGNIPTRLG 427 (740)
Q Consensus 348 ~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~i~~~~~~~~~ 427 (740)
.|.. |..|.++.++.|.+.-.......+++++..||+.+|++. ..|..+..+.+|++||+++|.|+ ..|..++
T Consensus 223 ef~g-----cs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLg 295 (565)
T KOG0472|consen 223 EFPG-----CSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLG 295 (565)
T ss_pred CCCc-----cHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccc
Confidence 3332 345666666666666444444446666667777766665 44555566666667777777666 5566666
Q ss_pred CCCCCCEEeCCCCcCcCCchhhhcC-----CCCCCE----EECCCCc---------CcccCCCCCCCCcccEEEcCCCcc
Q 045323 428 NLSFLDAIMMPNNRLEGPIPSAFCQ-----LRHLEI----LDLSRNN---------ISGSLPSCSSPFNIRRVHLSKNML 489 (740)
Q Consensus 428 ~l~~L~~L~l~~n~~~~~~~~~l~~-----l~~L~~----L~l~~n~---------~~~~~~~~~~~~~L~~L~l~~n~i 489 (740)
++ .|+.|.+.+|.+..+-.+.+.. ++.|+. =-++... ..+.+++.....+.+.|++++-++
T Consensus 296 nl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~ql 374 (565)
T KOG0472|consen 296 NL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQL 374 (565)
T ss_pred cc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhccccccc
Confidence 66 6666666666653211111100 000100 0001000 112223333344555666655555
Q ss_pred cCcCc-------------cccCCCcCCCCCCcccCCCCCCcEE-ecccCcccccCCccccCCCCCCEEEccCCcCcCCCC
Q 045323 490 QGPLL-------------GDLSYNRLNSNIPDWMNRLPQLRYL-ILANNGLEGEMPLQLCWLNKLQLVDLSHNNLSGQIP 555 (740)
Q Consensus 490 ~~~~~-------------~~l~~~~~~~~~~~~~~~~~~L~~L-~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p 555 (740)
+.... .+++.|++. .+|..+..+..+.+. .+++|.+. .+|..++.+++|..|++++|.+. .+|
T Consensus 375 t~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP 451 (565)
T KOG0472|consen 375 TLVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLP 451 (565)
T ss_pred ccCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccc-cchHHHHhhhcceeeecccchhh-hcc
Confidence 42211 122222221 334434333333332 33333333 44445555555555555555443 333
Q ss_pred ccccccccccccCCCCccCCCchhhccchhhHHhhhcccccceeeeeeeccccceeecccCCCccEEEcccCcccccChh
Q 045323 556 HCLYNISFNYREDNHDLFDQDPQILYQLPQLQILYTNYHNHKYLTNFTTKQRLYTYEVQPLHSMSGLDLSCNKLIGEIPL 635 (740)
Q Consensus 556 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~ 635 (740)
..+.. +..|+.||+|.|++. .+|+
T Consensus 452 ~e~~~-------------------------------------------------------lv~Lq~LnlS~NrFr-~lP~ 475 (565)
T KOG0472|consen 452 EEMGS-------------------------------------------------------LVRLQTLNLSFNRFR-MLPE 475 (565)
T ss_pred hhhhh-------------------------------------------------------hhhhheecccccccc-cchH
Confidence 22222 114555666666554 5555
Q ss_pred hhhcCCCCcEEECcCCcCcccCCccccCCCCCCEEeCCCCccCccCCcccccCCcCceeeccCcccc
Q 045323 636 QIGELSRIHTLNLSHNNLTGESPVTFSHMKQVESLDLSYNNLNGKIPPRLIELNALAVFSVAFNNLS 702 (740)
Q Consensus 636 ~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~ 702 (740)
.+..+..++.+-.++|++....|++++++.+|.+|||.+|.+. .+|+.+.+|++|+.|++++|++.
T Consensus 476 ~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 476 CLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred HHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 5555555555555556666555555566666666666666665 55556666666666666666665
No 6
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=5.2e-38 Score=300.30 Aligned_cols=485 Identities=24% Similarity=0.305 Sum_probs=338.1
Q ss_pred CCCCCEEEccCCcccccccccCcCCCCCCEEEcCCCCCCCCCCccccCCCCCCCEEeccCCcccccCCccccccCCCccE
Q 045323 132 LVYLQEVNIDRNNLSGSLPWCLANLTYLRLLDVSFNQLTENISSSPLMNLTYIEELWLSNNHFQISISLEPFFNHSKLKF 211 (740)
Q Consensus 132 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~i~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~ 211 (740)
-..|+.+.+++|.+. .....+.++..|.+|++++|+++. .|. +++.+..++.+++++|.+.
T Consensus 44 qv~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~~-lp~-aig~l~~l~~l~vs~n~ls---------------- 104 (565)
T KOG0472|consen 44 QVDLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLSQ-LPA-AIGELEALKSLNVSHNKLS---------------- 104 (565)
T ss_pred hcchhhhhhccCchh-hccHhhhcccceeEEEeccchhhh-CCH-HHHHHHHHHHhhcccchHh----------------
Confidence 356788888888887 455567888888888888888865 666 6888888888888887764
Q ss_pred EeCCCccccccccCCCCCCccccEEEecCCCCCCCCChhhcCCCCCCEEEcCCCCCCCCCChhHHhcCCCCCEEEccCCc
Q 045323 212 FDGDIYAEIETSHSSLTPKFQLTSISLFGHGDSGIFPKFLYHQHDLEYVDLSHLNLTREFPNWLLEKNKKLKRLSLVNIS 291 (740)
Q Consensus 212 L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~L~~~~~~~~~~~~~~~~~~~L~~L~L~~~~ 291 (740)
.+|+.+....+++.+++++|.+. ++++.+ +.+..++.++..+|.
T Consensus 105 ----------------------------------~lp~~i~s~~~l~~l~~s~n~~~-el~~~i-~~~~~l~dl~~~~N~ 148 (565)
T KOG0472|consen 105 ----------------------------------ELPEQIGSLISLVKLDCSSNELK-ELPDSI-GRLLDLEDLDATNNQ 148 (565)
T ss_pred ----------------------------------hccHHHhhhhhhhhhhcccccee-ecCchH-HHHhhhhhhhccccc
Confidence 15677777788899999999887 566655 467778888887777
Q ss_pred ccccCCCCCCCCCCCCEEEccCCcccccCchhhhhcCCCCcEEeccCCcccccCCCCccCcCccccCCccEEEccCCCCC
Q 045323 292 LFGPFPLPIHCHKNLRVLDVSNNKLQGHIPIEIGEVLPNLVVLNVATNAFNGSIPSSFGNTWPWGCFYLEYLVLSNNSLQ 371 (740)
Q Consensus 292 ~~~~~~~~l~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~ 371 (740)
+.+ .|..+..+.++..+++.+|.++ ..|..... ++.|+.++...|.+. .+|+.++.+. +|+-|++.+|++.
T Consensus 149 i~s-lp~~~~~~~~l~~l~~~~n~l~-~l~~~~i~-m~~L~~ld~~~N~L~-tlP~~lg~l~-----~L~~LyL~~Nki~ 219 (565)
T KOG0472|consen 149 ISS-LPEDMVNLSKLSKLDLEGNKLK-ALPENHIA-MKRLKHLDCNSNLLE-TLPPELGGLE-----SLELLYLRRNKIR 219 (565)
T ss_pred ccc-CchHHHHHHHHHHhhccccchh-hCCHHHHH-HHHHHhcccchhhhh-cCChhhcchh-----hhHHHHhhhcccc
Confidence 653 4566777777888888888887 66666555 678888887777766 5666676655 5777777777776
Q ss_pred CcCcccccCCCCCCeeecCCCcceecCCcCCCCCCCCceEeCCCcccccCCCcCCCCCCCCCEEeCCCCcCcCCchhhhc
Q 045323 372 GQLFSKEFNLTKLKRLNLDGNHFIGDIPKTLSNCSALQGLYISDNNISGNIPTRLGNLSFLDAIMMPNNRLEGPIPSAFC 451 (740)
Q Consensus 372 ~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~ 451 (740)
. .| .|.++..|+++.++.|++.-...+...+++++..||+.+|++. ..|+.+..+.+|++|++++|.++ ..|..++
T Consensus 220 ~-lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLg 295 (565)
T KOG0472|consen 220 F-LP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLG 295 (565)
T ss_pred c-CC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccc
Confidence 3 33 5677777777777777776433344456777777777777777 66777777777777777777777 4566677
Q ss_pred CCCCCCEEECCCCcCcccCCCCCC------CCcccEEEcCCCcccCcCccccCCCcCCCC----CCcccCCCCCCcEEec
Q 045323 452 QLRHLEILDLSRNNISGSLPSCSS------PFNIRRVHLSKNMLQGPLLGDLSYNRLNSN----IPDWMNRLPQLRYLIL 521 (740)
Q Consensus 452 ~l~~L~~L~l~~n~~~~~~~~~~~------~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~----~~~~~~~~~~L~~L~l 521 (740)
++ +|+.|.+.+|++...-..... +..|+. .+..-.++... ++..-.+. .........+.+.|++
T Consensus 296 nl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs-~~~~dglS~se----~~~e~~~t~~~~~~~~~~~~i~tkiL~~ 369 (565)
T KOG0472|consen 296 NL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRS-KIKDDGLSQSE----GGTETAMTLPSESFPDIYAIITTKILDV 369 (565)
T ss_pred cc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHH-hhccCCCCCCc----ccccccCCCCCCcccchhhhhhhhhhcc
Confidence 77 777777777775421111111 111211 00000111000 00000011 1122345678899999
Q ss_pred ccCcccccCCccccCC--CCCCEEEccCCcCcCCCCccccccccccccCCCCccCCCchhhccchhhHH-hhhcccccce
Q 045323 522 ANNGLEGEMPLQLCWL--NKLQLVDLSHNNLSGQIPHCLYNISFNYREDNHDLFDQDPQILYQLPQLQI-LYTNYHNHKY 598 (740)
Q Consensus 522 s~n~l~~~~~~~~~~l--~~L~~L~l~~n~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~L~~-l~~~~~~~~~ 598 (740)
++-.++....+.|..- .-....++++|.+. ++|..+.. ++.+.. +..+++.+.+
T Consensus 370 s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~----------------------lkelvT~l~lsnn~isf 426 (565)
T KOG0472|consen 370 SDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVE----------------------LKELVTDLVLSNNKISF 426 (565)
T ss_pred cccccccCCHHHHHHhhhcceEEEecccchHh-hhhhhhHH----------------------HHHHHHHHHhhcCcccc
Confidence 9998884433444332 24778999999885 55543322 222222 2222222222
Q ss_pred eeeeeeccccceeecccCCCccEEEcccCcccccChhhhhcCCCCcEEECcCCcCcccCCccccCCCCCCEEeCCCCccC
Q 045323 599 LTNFTTKQRLYTYEVQPLHSMSGLDLSCNKLIGEIPLQIGELSRIHTLNLSHNNLTGESPVTFSHMKQVESLDLSYNNLN 678 (740)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~n~l~ 678 (740)
....+..+++|..|++++|-+. .+|..++.+..|++|+|+.|++. ..|.++..+..|+.+-.++|++.
T Consensus 427 ----------v~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~ 494 (565)
T KOG0472|consen 427 ----------VPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIG 494 (565)
T ss_pred ----------chHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhcccccc
Confidence 1123456789999999999987 78999999999999999999999 89999888888999988999999
Q ss_pred ccCCcccccCCcCceeeccCcccccCCCCcccCCCCccccccccCCCC
Q 045323 679 GKIPPRLIELNALAVFSVAFNNLSGKTPDRVAQFGTFEEDSYEGNPFL 726 (740)
Q Consensus 679 ~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~~~~l~~l~l~~Np~~ 726 (740)
...|+++.+|.+|..||+.+|.+..++|. ++.|.++++|++.||||-
T Consensus 495 ~vd~~~l~nm~nL~tLDL~nNdlq~IPp~-LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 495 SVDPSGLKNMRNLTTLDLQNNDLQQIPPI-LGNMTNLRHLELDGNPFR 541 (565)
T ss_pred ccChHHhhhhhhcceeccCCCchhhCChh-hccccceeEEEecCCccC
Confidence 77777899999999999999999877665 699999999999999996
No 7
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.97 E-value=1.6e-33 Score=296.82 Aligned_cols=303 Identities=26% Similarity=0.290 Sum_probs=163.9
Q ss_pred CCCCEEECCCCCCCCccChhhhcCCCCCCEEEccCCcccccccccCcCCCCCCEEEcCCCCCCCCCCccccCCCCCCCEE
Q 045323 108 ASLKYLSLSNSYLNGTILDQGLCELVYLQEVNIDRNNLSGSLPWCLANLTYLRLLDVSFNQLTENISSSPLMNLTYIEEL 187 (740)
Q Consensus 108 ~~L~~L~Ls~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~i~~~~l~~l~~L~~L 187 (740)
..+..|+++.|.+. ..|-+.+.+..+|+.|++++|.+. ..|..+..+++|+.|+++.|.+.. +|. ...++.+|+++
T Consensus 21 ~~~~~ln~~~N~~l-~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~~-vp~-s~~~~~~l~~l 96 (1081)
T KOG0618|consen 21 EALQILNLRRNSLL-SRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIRS-VPS-SCSNMRNLQYL 96 (1081)
T ss_pred HHHHhhhccccccc-cCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHhh-Cch-hhhhhhcchhh
Confidence 34666666666554 333334555555777777766665 455566666667777766666643 554 56666666666
Q ss_pred eccCCcccccCCccccccCCCccEEeCCCccccccccCCCCCCccccEEEecCCCCCCCCChhhcCCCCCCEEEcCCCCC
Q 045323 188 WLSNNHFQISISLEPFFNHSKLKFFDGDIYAEIETSHSSLTPKFQLTSISLFGHGDSGIFPKFLYHQHDLEYVDLSHLNL 267 (740)
Q Consensus 188 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~L~~~~~ 267 (740)
.|.+|.+. ..|..+..+++|+.|+++.|.+
T Consensus 97 nL~~n~l~--------------------------------------------------~lP~~~~~lknl~~LdlS~N~f 126 (1081)
T KOG0618|consen 97 NLKNNRLQ--------------------------------------------------SLPASISELKNLQYLDLSFNHF 126 (1081)
T ss_pred eeccchhh--------------------------------------------------cCchhHHhhhcccccccchhcc
Confidence 66666543 1455556666666666666666
Q ss_pred CCCCChhHHhcCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCcccccCchhhhhcCCCCcEEeccCCcccccCCC
Q 045323 268 TREFPNWLLEKNKKLKRLSLVNISLFGPFPLPIHCHKNLRVLDVSNNKLQGHIPIEIGEVLPNLVVLNVATNAFNGSIPS 347 (740)
Q Consensus 268 ~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 347 (740)
. .+|..+ ..+..+..+..++|......+ .. .++.+++..+.+.+.++..+.. +.. .+++.+|.+.. .
T Consensus 127 ~-~~Pl~i-~~lt~~~~~~~s~N~~~~~lg----~~-~ik~~~l~~n~l~~~~~~~i~~-l~~--~ldLr~N~~~~-~-- 193 (1081)
T KOG0618|consen 127 G-PIPLVI-EVLTAEEELAASNNEKIQRLG----QT-SIKKLDLRLNVLGGSFLIDIYN-LTH--QLDLRYNEMEV-L-- 193 (1081)
T ss_pred C-CCchhH-HhhhHHHHHhhhcchhhhhhc----cc-cchhhhhhhhhcccchhcchhh-hhe--eeecccchhhh-h--
Confidence 5 555544 355555566666552222111 11 1555566666555555554443 222 46666665541 1
Q ss_pred CccCcCccccCCccEEEccCCCCCCcCcccccCCCCCCeeecCCCcceecCCcCCCCCCCCceEeCCCcccccCCCcCCC
Q 045323 348 SFGNTWPWGCFYLEYLVLSNNSLQGQLFSKEFNLTKLKRLNLDGNHFIGDIPKTLSNCSALQGLYISDNNISGNIPTRLG 427 (740)
Q Consensus 348 ~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~i~~~~~~~~~ 427 (740)
.+.. +++|+.+....|.+.... ..-++++.|+.++|.++...+.. ...+|+++++++|.+. ..|+++.
T Consensus 194 dls~-----~~~l~~l~c~rn~ls~l~----~~g~~l~~L~a~~n~l~~~~~~p--~p~nl~~~dis~n~l~-~lp~wi~ 261 (1081)
T KOG0618|consen 194 DLSN-----LANLEVLHCERNQLSELE----ISGPSLTALYADHNPLTTLDVHP--VPLNLQYLDISHNNLS-NLPEWIG 261 (1081)
T ss_pred hhhh-----ccchhhhhhhhcccceEE----ecCcchheeeeccCcceeecccc--ccccceeeecchhhhh-cchHHHH
Confidence 1111 224555555555554211 12255666666666655333221 1245666666666666 3446666
Q ss_pred CCCCCCEEeCCCCcCcCCchhhhcCCCCCCEEECCCCcCcccCCCCCCCCcccEEEcCCCccc
Q 045323 428 NLSFLDAIMMPNNRLEGPIPSAFCQLRHLEILDLSRNNISGSLPSCSSPFNIRRVHLSKNMLQ 490 (740)
Q Consensus 428 ~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~i~ 490 (740)
.+.+|+.+...+|.++ ..|..+...++|+.|.+..|.+....+......+|+.|++..|++.
T Consensus 262 ~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~yip~~le~~~sL~tLdL~~N~L~ 323 (1081)
T KOG0618|consen 262 ACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELEYIPPFLEGLKSLRTLDLQSNNLP 323 (1081)
T ss_pred hcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhhhCCCcccccceeeeeeehhcccc
Confidence 6666666666666664 4455555556666666666666544433334555555555555554
No 8
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-32 Score=290.60 Aligned_cols=349 Identities=26% Similarity=0.309 Sum_probs=198.6
Q ss_pred CCEEEcCCCCCCCCCChhHHhcCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCcccccCchhhhhcCCCCcEEec
Q 045323 257 LEYVDLSHLNLTREFPNWLLEKNKKLKRLSLVNISLFGPFPLPIHCHKNLRVLDVSNNKLQGHIPIEIGEVLPNLVVLNV 336 (740)
Q Consensus 257 L~~L~L~~~~~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~L~~L~l 336 (740)
++.+++..+.+.+.++..+ ..+.. .|+++.|.+. -..+..+.+|+.|.+..|.+. .+.. .-++|+.|+.
T Consensus 158 ik~~~l~~n~l~~~~~~~i-~~l~~--~ldLr~N~~~---~~dls~~~~l~~l~c~rn~ls-~l~~----~g~~l~~L~a 226 (1081)
T KOG0618|consen 158 IKKLDLRLNVLGGSFLIDI-YNLTH--QLDLRYNEME---VLDLSNLANLEVLHCERNQLS-ELEI----SGPSLTALYA 226 (1081)
T ss_pred chhhhhhhhhcccchhcch-hhhhe--eeecccchhh---hhhhhhccchhhhhhhhcccc-eEEe----cCcchheeee
Confidence 4445555555444444332 12222 3555555543 123444555666666666554 1111 1356777777
Q ss_pred cCCcccccCCCCccCcCccccCCccEEEccCCCCCCcCcccccCCCCCCeeecCCCcceecCCcCCCCCCCCceEeCCCc
Q 045323 337 ATNAFNGSIPSSFGNTWPWGCFYLEYLVLSNNSLQGQLFSKEFNLTKLKRLNLDGNHFIGDIPKTLSNCSALQGLYISDN 416 (740)
Q Consensus 337 ~~n~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n 416 (740)
+.|.++...+.-. ..+|+++++++|+++. .|..+..+.+|+.+++.+|.++ ..|..+....+|+.|.+..|
T Consensus 227 ~~n~l~~~~~~p~-------p~nl~~~dis~n~l~~-lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~n 297 (1081)
T KOG0618|consen 227 DHNPLTTLDVHPV-------PLNLQYLDISHNNLSN-LPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYN 297 (1081)
T ss_pred ccCcceeeccccc-------cccceeeecchhhhhc-chHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhh
Confidence 7777663222211 1267788888877774 3466777778888888877774 45555666677777777777
Q ss_pred ccccCCCcCCCCCCCCCEEeCCCCcCcCCchhhhcCCCC-CCEEECCCCcCcccCCCCCC--CCcccEEEcCCCcccCcC
Q 045323 417 NISGNIPTRLGNLSFLDAIMMPNNRLEGPIPSAFCQLRH-LEILDLSRNNISGSLPSCSS--PFNIRRVHLSKNMLQGPL 493 (740)
Q Consensus 417 ~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~-L~~L~l~~n~~~~~~~~~~~--~~~L~~L~l~~n~i~~~~ 493 (740)
.+. .+|......+.|++|++..|.+....+..+.-... |..|+.+.|++. ..+.... .+.|+.|++.+|.+++
T Consensus 298 el~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~-~lp~~~e~~~~~Lq~LylanN~Ltd-- 373 (1081)
T KOG0618|consen 298 ELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLS-TLPSYEENNHAALQELYLANNHLTD-- 373 (1081)
T ss_pred hhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhcccc-ccccccchhhHHHHHHHHhcCcccc--
Confidence 777 55566666777777888777776444333333333 666666666665 3332222 4556666666555542
Q ss_pred ccccCCCcCCCCCCcccCCCCCCcEEecccCcccccCCccccCCCCCCEEEccCCcCcCCCCccccccccccccCCCCcc
Q 045323 494 LGDLSYNRLNSNIPDWMNRLPQLRYLILANNGLEGEMPLQLCWLNKLQLVDLSHNNLSGQIPHCLYNISFNYREDNHDLF 573 (740)
Q Consensus 494 ~~~l~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~~~~~~~~~~~ 573 (740)
.....+..+++|+.|++++|++.......+.+++.|+.|+++||+++ .+|..++.
T Consensus 374 -----------~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~------------- 428 (1081)
T KOG0618|consen 374 -----------SCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVAN------------- 428 (1081)
T ss_pred -----------cchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHh-------------
Confidence 33334555666777777777666333345566666777777777664 33332222
Q ss_pred CCCchhhccchhhHHhhhcccccceeeeeeeccccceeecccCCCccEEEcccCcccccChhhhhcCCCCcEEECcCCcC
Q 045323 574 DQDPQILYQLPQLQILYTNYHNHKYLTNFTTKQRLYTYEVQPLHSMSGLDLSCNKLIGEIPLQIGELSRIHTLNLSHNNL 653 (740)
Q Consensus 574 ~~~~~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~L~~N~l 653 (740)
+ +.|+.|...+|++. ..| .+..++.|+.+|++.|++
T Consensus 429 ---------~---------------------------------~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L 464 (1081)
T KOG0618|consen 429 ---------L---------------------------------GRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNL 464 (1081)
T ss_pred ---------h---------------------------------hhhHHHhhcCCcee-ech-hhhhcCcceEEecccchh
Confidence 1 24444555566665 566 466677777777777766
Q ss_pred ccc-CCccccCCCCCCEEeCCCCccCccCCcccccCCcCceeeccCc
Q 045323 654 TGE-SPVTFSHMKQVESLDLSYNNLNGKIPPRLIELNALAVFSVAFN 699 (740)
Q Consensus 654 ~~~-~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N 699 (740)
+.. +|... ..++|++|||++|.-....-..|..+.++...+++-|
T Consensus 465 ~~~~l~~~~-p~p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 465 SEVTLPEAL-PSPNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred hhhhhhhhC-CCcccceeeccCCcccccchhhhHHhhhhhheecccC
Confidence 643 23322 2266777777777643344445555555665665555
No 9
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.96 E-value=1.8e-31 Score=268.69 Aligned_cols=347 Identities=25% Similarity=0.327 Sum_probs=259.7
Q ss_pred CCCCCCCCCEEEccCCcccccCchhhhhcCCCCcEEeccCCcccccCCCCccCcCccccCCccEEEccCCCCCC-cCccc
Q 045323 299 PIHCHKNLRVLDVSNNKLQGHIPIEIGEVLPNLVVLNVATNAFNGSIPSSFGNTWPWGCFYLEYLVLSNNSLQG-QLFSK 377 (740)
Q Consensus 299 ~l~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~-~~~~~ 377 (740)
....+++++.|.+....+. .+|..+.. +.+|+.|.+..|++. .+-..+..++ .|+.+++++|++.. .+|..
T Consensus 27 ~v~qMt~~~WLkLnrt~L~-~vPeEL~~-lqkLEHLs~~HN~L~-~vhGELs~Lp-----~LRsv~~R~N~LKnsGiP~d 98 (1255)
T KOG0444|consen 27 DVEQMTQMTWLKLNRTKLE-QVPEELSR-LQKLEHLSMAHNQLI-SVHGELSDLP-----RLRSVIVRDNNLKNSGIPTD 98 (1255)
T ss_pred hHHHhhheeEEEechhhhh-hChHHHHH-HhhhhhhhhhhhhhH-hhhhhhccch-----hhHHHhhhccccccCCCCch
Confidence 3344445555555555554 55665555 556666666666554 2222233322 57777777776653 35666
Q ss_pred ccCCCCCCeeecCCCcceecCCcCCCCCCCCceEeCCCcccccCCCcCCCCCCCCCEEeCCCCcCcCCchhhhcCCCCCC
Q 045323 378 EFNLTKLKRLNLDGNHFIGDIPKTLSNCSALQGLYISDNNISGNIPTRLGNLSFLDAIMMPNNRLEGPIPSAFCQLRHLE 457 (740)
Q Consensus 378 ~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~ 457 (740)
+..+..|+.|++++|++. ..|..+...+++-.|++++|.|..+....|.+++.|-.|++++|.+. .+|..+..+..|+
T Consensus 99 iF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~Lq 176 (1255)
T KOG0444|consen 99 IFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQ 176 (1255)
T ss_pred hcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhh
Confidence 677788888888888876 45666666777788888888888555556677888888888888887 4555667778888
Q ss_pred EEECCCCcCccc-CCCCCCCCcccEEEcCCCcccCcCccccCCCcCCCCCCcccCCCCCCcEEecccCcccccCCccccC
Q 045323 458 ILDLSRNNISGS-LPSCSSPFNIRRVHLSKNMLQGPLLGDLSYNRLNSNIPDWMNRLPQLRYLILANNGLEGEMPLQLCW 536 (740)
Q Consensus 458 ~L~l~~n~~~~~-~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~ 536 (740)
+|++++|++... +....++.+|+.|.+++.+-+ -..+|..+..+.+|..+|+|.|.+. ..|.++-.
T Consensus 177 tL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRT------------l~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~ 243 (1255)
T KOG0444|consen 177 TLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRT------------LDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYK 243 (1255)
T ss_pred hhhcCCChhhHHHHhcCccchhhhhhhcccccch------------hhcCCCchhhhhhhhhccccccCCC-cchHHHhh
Confidence 888888876522 222334566777777776533 1256777888899999999999998 78888888
Q ss_pred CCCCCEEEccCCcCcCCCCccccccccccccCCCCccCCCchhhccchhhHHhhhcccccceeeeeeeccccceeecccC
Q 045323 537 LNKLQLVDLSHNNLSGQIPHCLYNISFNYREDNHDLFDQDPQILYQLPQLQILYTNYHNHKYLTNFTTKQRLYTYEVQPL 616 (740)
Q Consensus 537 l~~L~~L~l~~n~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (740)
+++|+.|++++|+|+.... .....
T Consensus 244 l~~LrrLNLS~N~iteL~~--------------------------------------------------------~~~~W 267 (1255)
T KOG0444|consen 244 LRNLRRLNLSGNKITELNM--------------------------------------------------------TEGEW 267 (1255)
T ss_pred hhhhheeccCcCceeeeec--------------------------------------------------------cHHHH
Confidence 9999999999998862110 01223
Q ss_pred CCccEEEcccCcccccChhhhhcCCCCcEEECcCCcCcc-cCCccccCCCCCCEEeCCCCccCccCCcccccCCcCceee
Q 045323 617 HSMSGLDLSCNKLIGEIPLQIGELSRIHTLNLSHNNLTG-ESPVTFSHMKQVESLDLSYNNLNGKIPPRLIELNALAVFS 695 (740)
Q Consensus 617 ~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~-~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ 695 (740)
.+|+.|++|.|+++ .+|++++.++.|++|.+.+|+++- -+|++++.+.+|+.+..++|.+. ..|+++..+..|+.|.
T Consensus 268 ~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~ 345 (1255)
T KOG0444|consen 268 ENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLK 345 (1255)
T ss_pred hhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhc
Confidence 47899999999998 899999999999999999999884 48999999999999999999998 9999999999999999
Q ss_pred ccCcccccCCCCcccCCCCccccccccCCCCC
Q 045323 696 VAFNNLSGKTPDRVAQFGTFEEDSYEGNPFLC 727 (740)
Q Consensus 696 ls~N~l~~~~~~~~~~~~~l~~l~l~~Np~~c 727 (740)
|++|++.+. |+.+-.++.+..||++.||.+-
T Consensus 346 L~~NrLiTL-PeaIHlL~~l~vLDlreNpnLV 376 (1255)
T KOG0444|consen 346 LDHNRLITL-PEAIHLLPDLKVLDLRENPNLV 376 (1255)
T ss_pred ccccceeec-hhhhhhcCCcceeeccCCcCcc
Confidence 999999876 6777888999999999999976
No 10
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.95 E-value=7.1e-31 Score=264.49 Aligned_cols=342 Identities=26% Similarity=0.329 Sum_probs=210.1
Q ss_pred CCCCcEEeCCCCCCcC-cccchhcccCCCCCEEECCCCCCCCccChhhhcCCCCCCEEEccCCcccccccccCcCCCCCC
Q 045323 82 FKNLEYFNMDFCTAFS-NSFLQMSELMASLKYLSLSNSYLNGTILDQGLCELVYLQEVNIDRNNLSGSLPWCLANLTYLR 160 (740)
Q Consensus 82 l~~L~~L~l~~~~~~~-~~~~~~l~~l~~L~~L~Ls~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 160 (740)
++.++.+|++ .+.|+ +.+|.....++.++.|.|...++. .+|. .++.+.+|++|.+++|++. .+...++.++.|+
T Consensus 6 LpFVrGvDfs-gNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPe-EL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LR 81 (1255)
T KOG0444|consen 6 LPFVRGVDFS-GNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPE-ELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLR 81 (1255)
T ss_pred cceeeccccc-CCcCCCCcCchhHHHhhheeEEEechhhhh-hChH-HHHHHhhhhhhhhhhhhhH-hhhhhhccchhhH
Confidence 4555666666 55666 346666667777777777766664 5665 6777777777777777765 3344566677777
Q ss_pred EEEcCCCCCCC-CCCccccCCCCCCCEEeccCCcccccCCccccccCCCccEEeCCCccccccccCCCCCCccccEEEec
Q 045323 161 LLDVSFNQLTE-NISSSPLMNLTYIEELWLSNNHFQISISLEPFFNHSKLKFFDGDIYAEIETSHSSLTPKFQLTSISLF 239 (740)
Q Consensus 161 ~L~l~~n~l~~-~i~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~ 239 (740)
.++++.|++.. .||. .+..+..|..||+++|.+..
T Consensus 82 sv~~R~N~LKnsGiP~-diF~l~dLt~lDLShNqL~E------------------------------------------- 117 (1255)
T KOG0444|consen 82 SVIVRDNNLKNSGIPT-DIFRLKDLTILDLSHNQLRE------------------------------------------- 117 (1255)
T ss_pred HHhhhccccccCCCCc-hhcccccceeeecchhhhhh-------------------------------------------
Confidence 77777776532 2444 56667777777777766541
Q ss_pred CCCCCCCCChhhcCCCCCCEEEcCCCCCCCCCChhHHhcCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCccccc
Q 045323 240 GHGDSGIFPKFLYHQHDLEYVDLSHLNLTREFPNWLLEKNKKLKRLSLVNISLFGPFPLPIHCHKNLRVLDVSNNKLQGH 319 (740)
Q Consensus 240 ~~~~~~~~~~~l~~l~~L~~L~L~~~~~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~L~~L~l~~~~l~~~ 319 (740)
.|..+..-+++-.|+|++|+|. .+|..+|-++..|-.|+|++|++.. .|..+..+..|++|++++|.+. .
T Consensus 118 -------vP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe~-LPPQ~RRL~~LqtL~Ls~NPL~-h 187 (1255)
T KOG0444|consen 118 -------VPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLEM-LPPQIRRLSMLQTLKLSNNPLN-H 187 (1255)
T ss_pred -------cchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhhh-cCHHHHHHhhhhhhhcCCChhh-H
Confidence 4666777778888999999887 7888887788888888888877653 3445666677777777777654 1
Q ss_pred CchhhhhcCCCCcEEeccCCccc-ccCCCCccCcCccccCCccEEEccCCCCCCcCcccccCCCCCCeeecCCCcceecC
Q 045323 320 IPIEIGEVLPNLVVLNVATNAFN-GSIPSSFGNTWPWGCFYLEYLVLSNNSLQGQLFSKEFNLTKLKRLNLDGNHFIGDI 398 (740)
Q Consensus 320 ~~~~~~~~l~~L~~L~l~~n~~~-~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 398 (740)
.-..-...+.+|+.|.+++.+-+ ..+|.++..+. +|..+|++.|++. ..|..+..+++|+.|++++|+++..
T Consensus 188 fQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~-----NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~iteL- 260 (1255)
T KOG0444|consen 188 FQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLH-----NLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKITEL- 260 (1255)
T ss_pred HHHhcCccchhhhhhhcccccchhhcCCCchhhhh-----hhhhccccccCCC-cchHHHhhhhhhheeccCcCceeee-
Confidence 11111112445566666655422 24455555444 5666666666666 4556666666666666666666532
Q ss_pred CcCCCCCCCCceEeCCCcccccCCCcCCCCCCCCCEEeCCCCcCcC-CchhhhcCCCCCCEEECCCCcCcccCCCCCCCC
Q 045323 399 PKTLSNCSALQGLYISDNNISGNIPTRLGNLSFLDAIMMPNNRLEG-PIPSAFCQLRHLEILDLSRNNISGSLPSCSSPF 477 (740)
Q Consensus 399 ~~~l~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~-~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~ 477 (740)
........+|++|++++|+++ .+|+++..+++|+.|...+|+++. -+|..+..+..|+++..++|.+.-.......|.
T Consensus 261 ~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LElVPEglcRC~ 339 (1255)
T KOG0444|consen 261 NMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLELVPEGLCRCV 339 (1255)
T ss_pred eccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccccCchhhhhhH
Confidence 222233346666666666666 566666666666666666666542 345556666666666666666552222333344
Q ss_pred cccEEEcCCCcc
Q 045323 478 NIRRVHLSKNML 489 (740)
Q Consensus 478 ~L~~L~l~~n~i 489 (740)
.|+.|.++.|++
T Consensus 340 kL~kL~L~~NrL 351 (1255)
T KOG0444|consen 340 KLQKLKLDHNRL 351 (1255)
T ss_pred HHHHhcccccce
Confidence 555555554444
No 11
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.90 E-value=4.1e-22 Score=236.58 Aligned_cols=344 Identities=19% Similarity=0.204 Sum_probs=172.9
Q ss_pred HhcCCCCCEEEccCCcc------cccCCCCCCCCC-CCCEEEccCCcccccCchhhhhcCCCCcEEeccCCcccccCCCC
Q 045323 276 LEKNKKLKRLSLVNISL------FGPFPLPIHCHK-NLRVLDVSNNKLQGHIPIEIGEVLPNLVVLNVATNAFNGSIPSS 348 (740)
Q Consensus 276 ~~~~~~L~~L~L~~~~~------~~~~~~~l~~~~-~L~~L~l~~~~l~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~ 348 (740)
|..+++|+.|.+..+.. ....|..+..++ +|+.|.+.++.+. .+|..+. ..+|+.|++.++.+. .++..
T Consensus 554 F~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f~--~~~L~~L~L~~s~l~-~L~~~ 629 (1153)
T PLN03210 554 FKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNFR--PENLVKLQMQGSKLE-KLWDG 629 (1153)
T ss_pred HhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcCC--ccCCcEEECcCcccc-ccccc
Confidence 34555555555543321 112233333332 3555555555554 4554432 345555555555544 23333
Q ss_pred ccCcCccccCCccEEEccCCCCCCcCcccccCCCCCCeeecCCCcceecCCcCCCCCCCCceEeCCCcccccCCCcCCCC
Q 045323 349 FGNTWPWGCFYLEYLVLSNNSLQGQLFSKEFNLTKLKRLNLDGNHFIGDIPKTLSNCSALQGLYISDNNISGNIPTRLGN 428 (740)
Q Consensus 349 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~i~~~~~~~~~~ 428 (740)
+..+. +|+.|+++++......| .+..+++|++|++++|.....+|..+..+++|+.|++++|.....+|..+ +
T Consensus 630 ~~~l~-----~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~ 702 (1153)
T PLN03210 630 VHSLT-----GLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-N 702 (1153)
T ss_pred cccCC-----CCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-C
Confidence 33222 45555555543322233 24445555555555554444455555555555555555543333344333 4
Q ss_pred CCCCCEEeCCCCcCcCCchhhhcCCCCCCEEECCCCcCcccCCCCCCCCcccEEEcCCCcccCcCccccCCCcCCCCCCc
Q 045323 429 LSFLDAIMMPNNRLEGPIPSAFCQLRHLEILDLSRNNISGSLPSCSSPFNIRRVHLSKNMLQGPLLGDLSYNRLNSNIPD 508 (740)
Q Consensus 429 l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~~~ 508 (740)
+++|+.|++++|......|.. .++|++|++++|.+. .+|....+++|+.|.+.++...... +.+....+.
T Consensus 703 l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~~l~~L~~L~l~~~~~~~l~------~~~~~l~~~ 772 (1153)
T PLN03210 703 LKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNLRLENLDELILCEMKSEKLW------ERVQPLTPL 772 (1153)
T ss_pred CCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccccccccccccccccchhhcc------ccccccchh
Confidence 555555555555433233321 234555555555544 3333334455555555443211000 000001111
Q ss_pred ccCCCCCCcEEecccCcccccCCccccCCCCCCEEEccCCcCcCCCCccccccccccccCCCCccCCCchhhccchhhHH
Q 045323 509 WMNRLPQLRYLILANNGLEGEMPLQLCWLNKLQLVDLSHNNLSGQIPHCLYNISFNYREDNHDLFDQDPQILYQLPQLQI 588 (740)
Q Consensus 509 ~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~L~~ 588 (740)
.+...++|+.|++++|.....+|..+..+++|+.|++++|...+.+|...
T Consensus 773 ~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~------------------------------ 822 (1153)
T PLN03210 773 MTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI------------------------------ 822 (1153)
T ss_pred hhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC------------------------------
Confidence 12223566666666665554556666666666666666654332333211
Q ss_pred hhhcccccceeeeeeeccccceeecccCCCccEEEcccCcccccChhhhhcCCCCcEEECcCCcCcccCCccccCCCCCC
Q 045323 589 LYTNYHNHKYLTNFTTKQRLYTYEVQPLHSMSGLDLSCNKLIGEIPLQIGELSRIHTLNLSHNNLTGESPVTFSHMKQVE 668 (740)
Q Consensus 589 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~ 668 (740)
.+++|+.|++++|.....+|.. .++|+.|+|++|.++ .+|..+..+++|+
T Consensus 823 --------------------------~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~ 872 (1153)
T PLN03210 823 --------------------------NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLS 872 (1153)
T ss_pred --------------------------CccccCEEECCCCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCC
Confidence 2346777777776554444432 356777777777777 5666677777777
Q ss_pred EEeCCCCccCccCCcccccCCcCceeeccCcc
Q 045323 669 SLDLSYNNLNGKIPPRLIELNALAVFSVAFNN 700 (740)
Q Consensus 669 ~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~ 700 (740)
.|++++|+-...+|.....+++|+.+++++|.
T Consensus 873 ~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 873 FLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred EEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 77777754333566666677777777777774
No 12
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.89 E-value=3e-25 Score=212.93 Aligned_cols=290 Identities=22% Similarity=0.228 Sum_probs=197.1
Q ss_pred CccEEEccCCCCCCcCcccccCCCCCCeeecCCCcceecCCcCCCCCCCCceEeCCC-cccccCCCcCCCCCCCCCEEeC
Q 045323 359 YLEYLVLSNNSLQGQLFSKEFNLTKLKRLNLDGNHFIGDIPKTLSNCSALQGLYISD-NNISGNIPTRLGNLSFLDAIMM 437 (740)
Q Consensus 359 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~-n~i~~~~~~~~~~l~~L~~L~l 437 (740)
...++++..|.|+...+..|..+++|++|+|++|.|+.+.|.+|.+++++..|.+.+ |+|+......|+++..++.|.+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLll 147 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLL 147 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhc
Confidence 566777777777777777777788888888888888777778888777777776666 7777666667777777887777
Q ss_pred CCCcCcCCchhhhcCCCCCCEEECCCCcCcccCCCCCCCCcccEEEcCCCcccCcCccccCCCcCCCCCCcccCCCCCCc
Q 045323 438 PNNRLEGPIPSAFCQLRHLEILDLSRNNISGSLPSCSSPFNIRRVHLSKNMLQGPLLGDLSYNRLNSNIPDWMNRLPQLR 517 (740)
Q Consensus 438 ~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~~~~~~~~~~L~ 517 (740)
.-|.+.....++|..+++|..|.+..|.+..... ..|..+.+++
T Consensus 148 Nan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~------------------------------------~tf~~l~~i~ 191 (498)
T KOG4237|consen 148 NANHINCIRQDALRDLPSLSLLSLYDNKIQSICK------------------------------------GTFQGLAAIK 191 (498)
T ss_pred ChhhhcchhHHHHHHhhhcchhcccchhhhhhcc------------------------------------ccccchhccc
Confidence 7777777777777777777777777776651111 1355556666
Q ss_pred EEecccCcccccCCccccCCCCCCEEEccCCcCcC-----CCCccccccccccccCCCCccCCCchhhccchhhHHhhhc
Q 045323 518 YLILANNGLEGEMPLQLCWLNKLQLVDLSHNNLSG-----QIPHCLYNISFNYREDNHDLFDQDPQILYQLPQLQILYTN 592 (740)
Q Consensus 518 ~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~-----~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~L~~l~~~ 592 (740)
++.+..|.+- ..++++.+... +..+++.. .+|..+.... .-+..+..|... ++
T Consensus 192 tlhlA~np~i-----cdCnL~wla~~-~a~~~ietsgarc~~p~rl~~~R---------i~q~~a~kf~c~--~e----- 249 (498)
T KOG4237|consen 192 TLHLAQNPFI-----CDCNLPWLADD-LAMNPIETSGARCVSPYRLYYKR---------INQEDARKFLCS--LE----- 249 (498)
T ss_pred hHhhhcCccc-----cccccchhhhH-HhhchhhcccceecchHHHHHHH---------hcccchhhhhhh--HH-----
Confidence 6666666532 12222222221 11111110 1111111100 001111111000 00
Q ss_pred ccccceeeeeeeccccceeecccCCCccEEEcccCcccccCh-hhhhcCCCCcEEECcCCcCcccCCccccCCCCCCEEe
Q 045323 593 YHNHKYLTNFTTKQRLYTYEVQPLHSMSGLDLSCNKLIGEIP-LQIGELSRIHTLNLSHNNLTGESPVTFSHMKQVESLD 671 (740)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~ 671 (740)
++.+--.+.+...++.| ..|..+++|++|+|++|+++.+-+.+|.....+++|+
T Consensus 250 -------------------------sl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~ 304 (498)
T KOG4237|consen 250 -------------------------SLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELY 304 (498)
T ss_pred -------------------------hHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhh
Confidence 11111122232333444 4599999999999999999999999999999999999
Q ss_pred CCCCccCccCCcccccCCcCceeeccCcccccCCCCcccCCCCccccccccCCCCCCcCC
Q 045323 672 LSYNNLNGKIPPRLIELNALAVFSVAFNNLSGKTPDRVAQFGTFEEDSYEGNPFLCGQPL 731 (740)
Q Consensus 672 Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~~~~l~~l~l~~Np~~c~~~l 731 (740)
|..|+|...-...|..+..|+.|+|.+|+|+...|..|..+.+|+.+.+-+|||.|+|.|
T Consensus 305 L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l 364 (498)
T KOG4237|consen 305 LTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRL 364 (498)
T ss_pred cCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccch
Confidence 999999976667899999999999999999999999999999999999999999999975
No 13
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.89 E-value=2.3e-21 Score=230.21 Aligned_cols=270 Identities=24% Similarity=0.298 Sum_probs=173.8
Q ss_pred hhcCCCCCCEEEcCCCCCCCCCChhHHhcCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCcccccCchhhhhcCC
Q 045323 250 FLYHQHDLEYVDLSHLNLTREFPNWLLEKNKKLKRLSLVNISLFGPFPLPIHCHKNLRVLDVSNNKLQGHIPIEIGEVLP 329 (740)
Q Consensus 250 ~l~~l~~L~~L~L~~~~~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~L~~L~l~~~~l~~~~~~~~~~~l~ 329 (740)
.+..+++|+.|+++++.....+|. +..+++|++|++++|......|..+..+++|+.|++++|...+.+|..+ .++
T Consensus 629 ~~~~l~~Lk~L~Ls~~~~l~~ip~--ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i--~l~ 704 (1153)
T PLN03210 629 GVHSLTGLRNIDLRGSKNLKEIPD--LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI--NLK 704 (1153)
T ss_pred ccccCCCCCEEECCCCCCcCcCCc--cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC--CCC
Confidence 344455566666665544334443 2455666666666665555555556666666666666654333555443 256
Q ss_pred CCcEEeccCCcccccCCCCccCcCccccCCccEEEccCCCCCCcCcccccCCCCCCeeecCCCccee-------cCCcCC
Q 045323 330 NLVVLNVATNAFNGSIPSSFGNTWPWGCFYLEYLVLSNNSLQGQLFSKEFNLTKLKRLNLDGNHFIG-------DIPKTL 402 (740)
Q Consensus 330 ~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~-------~~~~~l 402 (740)
+|+.|++++|......|... .+|++|++++|.+.. +|..+ .+++|++|.+.++.... ..+...
T Consensus 705 sL~~L~Lsgc~~L~~~p~~~--------~nL~~L~L~~n~i~~-lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~ 774 (1153)
T PLN03210 705 SLYRLNLSGCSRLKSFPDIS--------TNISWLDLDETAIEE-FPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMT 774 (1153)
T ss_pred CCCEEeCCCCCCcccccccc--------CCcCeeecCCCcccc-ccccc-cccccccccccccchhhccccccccchhhh
Confidence 66666666665443333221 157777777776653 33322 45667777666543211 111112
Q ss_pred CCCCCCceEeCCCcccccCCCcCCCCCCCCCEEeCCCCcCcCCchhhhcCCCCCCEEECCCCcCcccCCCCCCCCcccEE
Q 045323 403 SNCSALQGLYISDNNISGNIPTRLGNLSFLDAIMMPNNRLEGPIPSAFCQLRHLEILDLSRNNISGSLPSCSSPFNIRRV 482 (740)
Q Consensus 403 ~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L 482 (740)
..+++|+.|++++|.....+|..++++++|+.|++++|.....+|... ++++|+.|++++|.....+|.. +.+|+.|
T Consensus 775 ~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~--~~nL~~L 851 (1153)
T PLN03210 775 MLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI--STNISDL 851 (1153)
T ss_pred hccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc--ccccCEe
Confidence 234678888888887776788888888899999998876544566554 6888999999988765555443 4678889
Q ss_pred EcCCCcccCcCccccCCCcCCCCCCcccCCCCCCcEEecccCcccccCCccccCCCCCCEEEccCCcC
Q 045323 483 HLSKNMLQGPLLGDLSYNRLNSNIPDWMNRLPQLRYLILANNGLEGEMPLQLCWLNKLQLVDLSHNNL 550 (740)
Q Consensus 483 ~l~~n~i~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~~ 550 (740)
++++|.++ .+|.++..+++|+.|++++|+-...++..+..+++|+.+++++|.-
T Consensus 852 ~Ls~n~i~--------------~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~~ 905 (1153)
T PLN03210 852 NLSRTGIE--------------EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCGA 905 (1153)
T ss_pred ECCCCCCc--------------cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCcc
Confidence 98888775 5677888899999999998644335676778889999999999863
No 14
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.88 E-value=5.5e-25 Score=211.16 Aligned_cols=291 Identities=19% Similarity=0.183 Sum_probs=183.6
Q ss_pred CCCCEEECCCCCCCCccChhhhcCCCCCCEEEccCCcccccccccCcCCCCCCEEEcCC-CCCCCCCCccccCCCCCCCE
Q 045323 108 ASLKYLSLSNSYLNGTILDQGLCELVYLQEVNIDRNNLSGSLPWCLANLTYLRLLDVSF-NQLTENISSSPLMNLTYIEE 186 (740)
Q Consensus 108 ~~L~~L~Ls~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~-n~l~~~i~~~~l~~l~~L~~ 186 (740)
..-..++|..|+|+ .||+.+|+.+++|++|||++|.|+.+.|.+|+++++|..|-+.+ |+|+. +|...|.++..|+-
T Consensus 67 ~~tveirLdqN~I~-~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~-l~k~~F~gL~slqr 144 (498)
T KOG4237|consen 67 PETVEIRLDQNQIS-SIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITD-LPKGAFGGLSSLQR 144 (498)
T ss_pred CcceEEEeccCCcc-cCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhh-hhhhHhhhHHHHHH
Confidence 45567889999998 88888999999999999999999999999999999988888877 77865 88878888888888
Q ss_pred EeccCCcccccCCccccccCCCccEEeCCCccccccccCCCCCCccccEEEecCCCCCCCCChhhcCCCCCCEEEcCCCC
Q 045323 187 LWLSNNHFQISISLEPFFNHSKLKFFDGDIYAEIETSHSSLTPKFQLTSISLFGHGDSGIFPKFLYHQHDLEYVDLSHLN 266 (740)
Q Consensus 187 L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~L~~~~ 266 (740)
|.+.-|.+. .+ ....+..++++..|.+.+|.
T Consensus 145 LllNan~i~-Ci------------------------------------------------r~~al~dL~~l~lLslyDn~ 175 (498)
T KOG4237|consen 145 LLLNANHIN-CI------------------------------------------------RQDALRDLPSLSLLSLYDNK 175 (498)
T ss_pred HhcChhhhc-ch------------------------------------------------hHHHHHHhhhcchhcccchh
Confidence 887777764 22 23445555566666666665
Q ss_pred CCCCCChhHHhcCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCcccccCchhhhhcCCCCcEEeccCCcccccCC
Q 045323 267 LTREFPNWLLEKNKKLKRLSLVNISLFGPFPLPIHCHKNLRVLDVSNNKLQGHIPIEIGEVLPNLVVLNVATNAFNGSIP 346 (740)
Q Consensus 267 ~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 346 (740)
+. .++...+..+..++++.+..+.+... .+++.+.. ++..+.+. . .++.......+.+.++...-+
T Consensus 176 ~q-~i~~~tf~~l~~i~tlhlA~np~icd-----CnL~wla~-~~a~~~ie------t-sgarc~~p~rl~~~Ri~q~~a 241 (498)
T KOG4237|consen 176 IQ-SICKGTFQGLAAIKTLHLAQNPFICD-----CNLPWLAD-DLAMNPIE------T-SGARCVSPYRLYYKRINQEDA 241 (498)
T ss_pred hh-hhccccccchhccchHhhhcCccccc-----cccchhhh-HHhhchhh------c-ccceecchHHHHHHHhcccch
Confidence 54 34433334555566665555543211 11111111 00001100 0 001111111222222221111
Q ss_pred CCccCcCccccCCccEEEccCCCCCCc-CcccccCCCCCCeeecCCCcceecCCcCCCCCCCCceEeCCCcccccCCCcC
Q 045323 347 SSFGNTWPWGCFYLEYLVLSNNSLQGQ-LFSKEFNLTKLKRLNLDGNHFIGDIPKTLSNCSALQGLYISDNNISGNIPTR 425 (740)
Q Consensus 347 ~~~~~~~~~~~~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~i~~~~~~~ 425 (740)
..|..... .+..--.+.+...+. ....|..+++|++|++++|+++.+.+.+|.+..++++|.+..|++..+-..+
T Consensus 242 ~kf~c~~e----sl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~ 317 (498)
T KOG4237|consen 242 RKFLCSLE----SLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGM 317 (498)
T ss_pred hhhhhhHH----hHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHh
Confidence 11111000 010001111222222 2234678888888888888888888888888888888888888887666677
Q ss_pred CCCCCCCCEEeCCCCcCcCCchhhhcCCCCCCEEECCCCcCc
Q 045323 426 LGNLSFLDAIMMPNNRLEGPIPSAFCQLRHLEILDLSRNNIS 467 (740)
Q Consensus 426 ~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~ 467 (740)
|.++..|+.|++++|+|+...|.+|..+.+|.+|.+-.|.+.
T Consensus 318 f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~ 359 (498)
T KOG4237|consen 318 FQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFN 359 (498)
T ss_pred hhccccceeeeecCCeeEEEecccccccceeeeeehccCccc
Confidence 888888888888888888888888888888888888877654
No 15
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.83 E-value=7.6e-20 Score=200.89 Aligned_cols=82 Identities=29% Similarity=0.381 Sum_probs=48.9
Q ss_pred CccEEEcccCcccccChhhhhcCCCCcEEECcCCcCcccCCccccCCCCCCEEeCCCCccCccCCcccccCCcCceeecc
Q 045323 618 SMSGLDLSCNKLIGEIPLQIGELSRIHTLNLSHNNLTGESPVTFSHMKQVESLDLSYNNLNGKIPPRLIELNALAVFSVA 697 (740)
Q Consensus 618 ~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls 697 (740)
+|+.|++++|++. .+|.. .++|+.|++++|+++. +|.. ..+|+.|++++|+++ .+|..+..+++|+.|+++
T Consensus 383 ~L~~LdLs~N~Lt-~LP~l---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs 453 (788)
T PRK15387 383 GLKELIVSGNRLT-SLPVL---PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 453 (788)
T ss_pred ccceEEecCCccc-CCCCc---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECC
Confidence 4566666666665 34432 2456666666666663 4432 235566666666666 556666666666666676
Q ss_pred CcccccCCCCc
Q 045323 698 FNNLSGKTPDR 708 (740)
Q Consensus 698 ~N~l~~~~~~~ 708 (740)
+|++++..+..
T Consensus 454 ~N~Ls~~~~~~ 464 (788)
T PRK15387 454 GNPLSERTLQA 464 (788)
T ss_pred CCCCCchHHHH
Confidence 66666655543
No 16
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.79 E-value=1.3e-18 Score=191.38 Aligned_cols=63 Identities=25% Similarity=0.388 Sum_probs=42.4
Q ss_pred CccEEEcccCcccccChhhhhcCCCCcEEECcCCcCcccCCccccCCCCCCEEeCCCCccCccCCccc
Q 045323 618 SMSGLDLSCNKLIGEIPLQIGELSRIHTLNLSHNNLTGESPVTFSHMKQVESLDLSYNNLNGKIPPRL 685 (740)
Q Consensus 618 ~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l 685 (740)
+|+.|++++|++. .+|.. ..+|+.|+|++|+++ .+|..+..+++|+.|+|++|++++..+..+
T Consensus 403 ~L~~LdLS~N~Ls-sIP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 403 ELKELMVSGNRLT-SLPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred CCCEEEccCCcCC-CCCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHH
Confidence 5666777777776 35542 245667777777777 566667777777777777777776655554
No 17
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.74 E-value=8.6e-18 Score=186.29 Aligned_cols=246 Identities=26% Similarity=0.386 Sum_probs=146.2
Q ss_pred CccEEEccCCCCCCcCcccccCCCCCCeeecCCCcceecCCcCCCCCCCCceEeCCCcccccCCCcCCCCCCCCCEEeCC
Q 045323 359 YLEYLVLSNNSLQGQLFSKEFNLTKLKRLNLDGNHFIGDIPKTLSNCSALQGLYISDNNISGNIPTRLGNLSFLDAIMMP 438 (740)
Q Consensus 359 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~ 438 (740)
+...|+++++.++. +|..+. +.++.|++++|+++. +|..+. ++|+.|++++|.++ .+|..+. ..|+.|+++
T Consensus 179 ~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~Lts-LP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls 249 (754)
T PRK15370 179 NKTELRLKILGLTT-IPACIP--EQITTLILDNNELKS-LPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELS 249 (754)
T ss_pred CceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCCCc-CChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECc
Confidence 46777887777774 343332 467788888887763 444332 47788888887777 3454332 467777777
Q ss_pred CCcCcCCchhhhcCCCCCCEEECCCCcCcccCCCCCCCCcccEEEcCCCcccCcCccccCCCcCCCCCCcccCCCCCCcE
Q 045323 439 NNRLEGPIPSAFCQLRHLEILDLSRNNISGSLPSCSSPFNIRRVHLSKNMLQGPLLGDLSYNRLNSNIPDWMNRLPQLRY 518 (740)
Q Consensus 439 ~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~~~~~~~~~~L~~ 518 (740)
+|.+. .+|..+. .+|+.|++++|++.. +|... +.+|+.|++++|+++. +|..+. ++|+.
T Consensus 250 ~N~L~-~LP~~l~--s~L~~L~Ls~N~L~~-LP~~l-~~sL~~L~Ls~N~Lt~--------------LP~~lp--~sL~~ 308 (754)
T PRK15370 250 INRIT-ELPERLP--SALQSLDLFHNKISC-LPENL-PEELRYLSVYDNSIRT--------------LPAHLP--SGITH 308 (754)
T ss_pred CCccC-cCChhHh--CCCCEEECcCCccCc-ccccc-CCCCcEEECCCCcccc--------------Ccccch--hhHHH
Confidence 77776 3444442 467777777777763 33311 3467777777766652 222221 35666
Q ss_pred EecccCcccccCCccccCCCCCCEEEccCCcCcCCCCccccccccccccCCCCccCCCchhhccchhhHHhhhcccccce
Q 045323 519 LILANNGLEGEMPLQLCWLNKLQLVDLSHNNLSGQIPHCLYNISFNYREDNHDLFDQDPQILYQLPQLQILYTNYHNHKY 598 (740)
Q Consensus 519 L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~L~~l~~~~~~~~~ 598 (740)
|++++|.++. +|..+ .++|+.|++++|.+++ +|..+
T Consensus 309 L~Ls~N~Lt~-LP~~l--~~sL~~L~Ls~N~Lt~-LP~~l---------------------------------------- 344 (754)
T PRK15370 309 LNVQSNSLTA-LPETL--PPGLKTLEAGENALTS-LPASL---------------------------------------- 344 (754)
T ss_pred HHhcCCcccc-CCccc--cccceeccccCCcccc-CChhh----------------------------------------
Confidence 7777776663 33322 2566777777766542 22110
Q ss_pred eeeeeeccccceeecccCCCccEEEcccCcccccChhhhhcCCCCcEEECcCCcCcccCCccccCCCCCCEEeCCCCccC
Q 045323 599 LTNFTTKQRLYTYEVQPLHSMSGLDLSCNKLIGEIPLQIGELSRIHTLNLSHNNLTGESPVTFSHMKQVESLDLSYNNLN 678 (740)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~n~l~ 678 (740)
+++|+.|++++|++. .+|..+. ++|++|+|++|+++ .+|..+. .+|+.|++++|++.
T Consensus 345 -----------------~~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~ 401 (754)
T PRK15370 345 -----------------PPELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NLPENLP--AALQIMQASRNNLV 401 (754)
T ss_pred -----------------cCcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc
Confidence 136677777777776 4555442 56777777777777 3444432 35777777777776
Q ss_pred ccCCccccc----CCcCceeeccCcccc
Q 045323 679 GKIPPRLIE----LNALAVFSVAFNNLS 702 (740)
Q Consensus 679 ~~~~~~l~~----l~~L~~L~ls~N~l~ 702 (740)
.+|..+.. ++++..+++.+|+++
T Consensus 402 -~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 402 -RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred -cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 44443333 366677777777765
No 18
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.73 E-value=1.8e-17 Score=183.70 Aligned_cols=183 Identities=27% Similarity=0.453 Sum_probs=101.4
Q ss_pred CCceEeCCCcccccCCCcCCCCCCCCCEEeCCCCcCcCCchhhhcCCCCCCEEECCCCcCcccCCCCCCCCcccEEEcCC
Q 045323 407 ALQGLYISDNNISGNIPTRLGNLSFLDAIMMPNNRLEGPIPSAFCQLRHLEILDLSRNNISGSLPSCSSPFNIRRVHLSK 486 (740)
Q Consensus 407 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~ 486 (740)
+|+.|++++|.+. .+|..+. .+|+.|++++|+++ .+|..+. ++|+.|++++|+++.. |.. .+++|+.|++++
T Consensus 242 ~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~L-P~~-lp~sL~~L~Ls~ 313 (754)
T PRK15370 242 TIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRTL-PAH-LPSGITHLNVQS 313 (754)
T ss_pred cccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccccC-ccc-chhhHHHHHhcC
Confidence 3444555555444 2333222 24555555555554 2333221 3566666666655532 211 123566666666
Q ss_pred CcccCcCccccCCCcCCCCCCcccCCCCCCcEEecccCcccccCCccccCCCCCCEEEccCCcCcCCCCccccccccccc
Q 045323 487 NMLQGPLLGDLSYNRLNSNIPDWMNRLPQLRYLILANNGLEGEMPLQLCWLNKLQLVDLSHNNLSGQIPHCLYNISFNYR 566 (740)
Q Consensus 487 n~i~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~~~~ 566 (740)
|.++ .+|..+ .++|+.|++++|.++. +|..+. ++|+.|++++|++. .+|..+
T Consensus 314 N~Lt--------------~LP~~l--~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~l-------- 365 (754)
T PRK15370 314 NSLT--------------ALPETL--PPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETL-------- 365 (754)
T ss_pred Cccc--------------cCCccc--cccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhh--------
Confidence 6554 222222 2567777777777763 444332 67788888877765 233211
Q ss_pred cCCCCccCCCchhhccchhhHHhhhcccccceeeeeeeccccceeecccCCCccEEEcccCcccccChhhhhcCCCCcEE
Q 045323 567 EDNHDLFDQDPQILYQLPQLQILYTNYHNHKYLTNFTTKQRLYTYEVQPLHSMSGLDLSCNKLIGEIPLQIGELSRIHTL 646 (740)
Q Consensus 567 ~~~~~~~~~~~~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L 646 (740)
.+.|+.|++++|++. .+|..+. ..|+.|
T Consensus 366 -------------------------------------------------p~~L~~LdLs~N~Lt-~LP~~l~--~sL~~L 393 (754)
T PRK15370 366 -------------------------------------------------PPTITTLDVSRNALT-NLPENLP--AALQIM 393 (754)
T ss_pred -------------------------------------------------cCCcCEEECCCCcCC-CCCHhHH--HHHHHH
Confidence 126777888888777 4555544 367778
Q ss_pred ECcCCcCcccCCccc----cCCCCCCEEeCCCCccC
Q 045323 647 NLSHNNLTGESPVTF----SHMKQVESLDLSYNNLN 678 (740)
Q Consensus 647 ~L~~N~l~~~~~~~l----~~l~~L~~L~Ls~n~l~ 678 (740)
++++|+++ .+|..+ +..+.+..|++.+|+++
T Consensus 394 dLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 394 QASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred hhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 88888877 444433 33467788888888876
No 19
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.71 E-value=4.2e-19 Score=183.86 Aligned_cols=109 Identities=22% Similarity=0.311 Sum_probs=71.1
Q ss_pred CCccEEEcccCccccc----ChhhhhcCCCCcEEECcCCcCcccCCcccc-----CCCCCCEEeCCCCccCc----cCCc
Q 045323 617 HSMSGLDLSCNKLIGE----IPLQIGELSRIHTLNLSHNNLTGESPVTFS-----HMKQVESLDLSYNNLNG----KIPP 683 (740)
Q Consensus 617 ~~L~~L~ls~n~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~-----~l~~L~~L~Ls~n~l~~----~~~~ 683 (740)
++|+.|++++|.+.+. ++..+..+++|++|++++|.+++.....+. ..+.|++|++++|.++. .++.
T Consensus 193 ~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~ 272 (319)
T cd00116 193 CNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAE 272 (319)
T ss_pred CCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHH
Confidence 4677777777766533 233455667788888888877753222221 23678888888888762 2344
Q ss_pred ccccCCcCceeeccCcccccC----CCCcccCC-CCccccccccCCC
Q 045323 684 RLIELNALAVFSVAFNNLSGK----TPDRVAQF-GTFEEDSYEGNPF 725 (740)
Q Consensus 684 ~l~~l~~L~~L~ls~N~l~~~----~~~~~~~~-~~l~~l~l~~Np~ 725 (740)
.+..+++|+.+++++|.++.. ....+... +.++++++.+|||
T Consensus 273 ~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 273 VLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred HHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 556667888888888888754 34444455 6788888888876
No 20
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.68 E-value=2.2e-18 Score=178.43 Aligned_cols=86 Identities=24% Similarity=0.299 Sum_probs=57.1
Q ss_pred CCCccEEEcccCcccccChhhhhc-----CCCCcEEECcCCcCcc----cCCccccCCCCCCEEeCCCCccCcc----CC
Q 045323 616 LHSMSGLDLSCNKLIGEIPLQIGE-----LSRIHTLNLSHNNLTG----ESPVTFSHMKQVESLDLSYNNLNGK----IP 682 (740)
Q Consensus 616 ~~~L~~L~ls~n~l~~~~~~~l~~-----l~~L~~L~L~~N~l~~----~~~~~l~~l~~L~~L~Ls~n~l~~~----~~ 682 (740)
+++|+.|++++|.+.+..+..+.. .+.|++|++++|.+++ .....+..+++|+.+++++|.++.. ..
T Consensus 220 ~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~ 299 (319)
T cd00116 220 LKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLA 299 (319)
T ss_pred cCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHH
Confidence 457777888887776533333322 3688888888888762 2344556667888888888888843 33
Q ss_pred cccccC-CcCceeeccCccc
Q 045323 683 PRLIEL-NALAVFSVAFNNL 701 (740)
Q Consensus 683 ~~l~~l-~~L~~L~ls~N~l 701 (740)
..+... +.|+.+++.+|++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 300 ESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred HHHhhcCCchhhcccCCCCC
Confidence 344444 6788888888764
No 21
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.62 E-value=8.5e-18 Score=143.19 Aligned_cols=106 Identities=23% Similarity=0.347 Sum_probs=54.2
Q ss_pred CccEEEcccCcccc-cChhhhhcCCCCcEEECcCCcCcccCCccccCCCCCCEEeCCCCccCccCCcccccCCcCceeec
Q 045323 618 SMSGLDLSCNKLIG-EIPLQIGELSRIHTLNLSHNNLTGESPVTFSHMKQVESLDLSYNNLNGKIPPRLIELNALAVFSV 696 (740)
Q Consensus 618 ~L~~L~ls~n~l~~-~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~l 696 (740)
.|+.||+++|++.. ..|..|..++.|+-|.|+.|.+. .+|...+.+++|+.|.+..|.+. .+|..+..+++|+.|++
T Consensus 103 ~levldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhi 180 (264)
T KOG0617|consen 103 ALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHI 180 (264)
T ss_pred hhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhc
Confidence 44444444444431 24444555555555555555555 44444455555555555555555 45555555556666666
Q ss_pred cCcccccCCCCcccCCC---CccccccccCCCC
Q 045323 697 AFNNLSGKTPDRVAQFG---TFEEDSYEGNPFL 726 (740)
Q Consensus 697 s~N~l~~~~~~~~~~~~---~l~~l~l~~Np~~ 726 (740)
.+|+++..+|+. +.+. +=+...++.|||.
T Consensus 181 qgnrl~vlppel-~~l~l~~~k~v~r~E~NPwv 212 (264)
T KOG0617|consen 181 QGNRLTVLPPEL-ANLDLVGNKQVMRMEENPWV 212 (264)
T ss_pred ccceeeecChhh-hhhhhhhhHHHHhhhhCCCC
Confidence 666665555542 3321 1123445555553
No 22
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.55 E-value=5.3e-17 Score=138.41 Aligned_cols=184 Identities=25% Similarity=0.438 Sum_probs=125.9
Q ss_pred CCCCCCEEECCCCcCcccCCCCCCCCcccEEEcCCCcccCcCccccCCCcCCCCCCcccCCCCCCcEEecccCcccccCC
Q 045323 452 QLRHLEILDLSRNNISGSLPSCSSPFNIRRVHLSKNMLQGPLLGDLSYNRLNSNIPDWMNRLPQLRYLILANNGLEGEMP 531 (740)
Q Consensus 452 ~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~ 531 (740)
.+...+.|.++.|+++...|....+.+|+.|++++|+|. .+|..++++++|+.|+++-|++. ..|
T Consensus 31 ~~s~ITrLtLSHNKl~~vppnia~l~nlevln~~nnqie--------------~lp~~issl~klr~lnvgmnrl~-~lp 95 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLTVVPPNIAELKNLEVLNLSNNQIE--------------ELPTSISSLPKLRILNVGMNRLN-ILP 95 (264)
T ss_pred chhhhhhhhcccCceeecCCcHHHhhhhhhhhcccchhh--------------hcChhhhhchhhhheecchhhhh-cCc
Confidence 344555555666666555555555556666666666554 56777778888888888888887 778
Q ss_pred ccccCCCCCCEEEccCCcCcC-CCCccccccccccccCCCCccCCCchhhccchhhHHhhhcccccceeeeeeeccccce
Q 045323 532 LQLCWLNKLQLVDLSHNNLSG-QIPHCLYNISFNYREDNHDLFDQDPQILYQLPQLQILYTNYHNHKYLTNFTTKQRLYT 610 (740)
Q Consensus 532 ~~~~~l~~L~~L~l~~n~~~~-~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~~~ 610 (740)
..|+.+|.|+.||+++|++.. ..|. .|-.+..|
T Consensus 96 rgfgs~p~levldltynnl~e~~lpg----------------------nff~m~tl------------------------ 129 (264)
T KOG0617|consen 96 RGFGSFPALEVLDLTYNNLNENSLPG----------------------NFFYMTTL------------------------ 129 (264)
T ss_pred cccCCCchhhhhhccccccccccCCc----------------------chhHHHHH------------------------
Confidence 888888888888888887752 1222 22233333
Q ss_pred eecccCCCccEEEcccCcccccChhhhhcCCCCcEEECcCCcCcccCCccccCCCCCCEEeCCCCccCccCCcccccCC-
Q 045323 611 YEVQPLHSMSGLDLSCNKLIGEIPLQIGELSRIHTLNLSHNNLTGESPVTFSHMKQVESLDLSYNNLNGKIPPRLIELN- 689 (740)
Q Consensus 611 ~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~- 689 (740)
+-|++++|.+. .+|..++.+++|+.|.+..|.+. ..|..++.++.|++|.+.+|+++ .+|+.+.++.
T Consensus 130 ---------ralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~-vlppel~~l~l 197 (264)
T KOG0617|consen 130 ---------RALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLT-VLPPELANLDL 197 (264)
T ss_pred ---------HHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceee-ecChhhhhhhh
Confidence 33557777776 77777888888888888888887 67777888888888888888887 6666666643
Q ss_pred --cCceeeccCcccccCCCCc
Q 045323 690 --ALAVFSVAFNNLSGKTPDR 708 (740)
Q Consensus 690 --~L~~L~ls~N~l~~~~~~~ 708 (740)
+=+...+.+|+....+.+.
T Consensus 198 ~~~k~v~r~E~NPwv~pIaeQ 218 (264)
T KOG0617|consen 198 VGNKQVMRMEENPWVNPIAEQ 218 (264)
T ss_pred hhhHHHHhhhhCCCCChHHHH
Confidence 2345567777776555554
No 23
>PLN03150 hypothetical protein; Provisional
Probab=99.31 E-value=3e-12 Score=142.22 Aligned_cols=119 Identities=34% Similarity=0.582 Sum_probs=110.7
Q ss_pred CccEEEcccCcccccChhhhhcCCCCcEEECcCCcCcccCCccccCCCCCCEEeCCCCccCccCCcccccCCcCceeecc
Q 045323 618 SMSGLDLSCNKLIGEIPLQIGELSRIHTLNLSHNNLTGESPVTFSHMKQVESLDLSYNNLNGKIPPRLIELNALAVFSVA 697 (740)
Q Consensus 618 ~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls 697 (740)
.++.|+|++|.+.+.+|..+..+++|+.|+|++|.+++.+|..++.+++|+.|+|++|++++.+|+.+..+++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCCCcccCC-CCccccccccCCCCCCcCCCCCCC
Q 045323 698 FNNLSGKTPDRVAQF-GTFEEDSYEGNPFLCGQPLLKSCN 736 (740)
Q Consensus 698 ~N~l~~~~~~~~~~~-~~l~~l~l~~Np~~c~~~l~~~~~ 736 (740)
+|++++.+|..++.. ..+..+++.+|++.|+++-.+.|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~l~~C~ 538 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPGLRACG 538 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCCCCCCc
Confidence 999999999877654 467789999999999988777784
No 24
>PLN03150 hypothetical protein; Provisional
Probab=99.27 E-value=2.9e-11 Score=134.43 Aligned_cols=143 Identities=24% Similarity=0.343 Sum_probs=111.0
Q ss_pred CCcHHHHHHHHHHhh--------cCCCCCCc----cccceEecCCC----CceEEEECCCCCCCCCCCcccccccccccc
Q 045323 7 GCLEQEGYALLKLKH--------DFFNNHCC----QWACVECNTTT----GKVISLDLDGTRKLGDGEGYLNASLFTSFQ 70 (740)
Q Consensus 7 ~~~~~~~~~~~~~~~--------~~~~~~~c----~~~~~~c~~~~----~~v~~ldl~~~~~~~~~~~~l~~~~f~~~~ 70 (740)
...+.|..|++++|+ +|..+.|+ .|.|+.|.... ..|+.++|+++.+
T Consensus 368 ~t~~~~~~aL~~~k~~~~~~~~~~W~g~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L----------------- 430 (623)
T PLN03150 368 KTLLEEVSALQTLKSSLGLPLRFGWNGDPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGL----------------- 430 (623)
T ss_pred ccCchHHHHHHHHHHhcCCcccCCCCCCCCCCcccccccceeeccCCCCceEEEEEECCCCCc-----------------
Confidence 445678889999987 47776664 69999995321 1366666665543
Q ss_pred ccceeeCCCCCCCCCcEEeCCCCCCcCcccchhcccCCCCCEEECCCCCCCCccChhhhcCCCCCCEEEccCCccccccc
Q 045323 71 QLELLDLSILNFKNLEYFNMDFCTAFSNSFLQMSELMASLKYLSLSNSYLNGTILDQGLCELVYLQEVNIDRNNLSGSLP 150 (740)
Q Consensus 71 ~L~~Ldls~~~l~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 150 (740)
.+.+|..++.+++|++|+|++|.+.+.+|. .+..+++|++|+|++|.+++.+|
T Consensus 431 --------------------------~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~-~~~~l~~L~~LdLs~N~lsg~iP 483 (623)
T PLN03150 431 --------------------------RGFIPNDISKLRHLQSINLSGNSIRGNIPP-SLGSITSLEVLDLSYNSFNGSIP 483 (623)
T ss_pred --------------------------cccCCHHHhCCCCCCEEECCCCcccCcCCh-HHhCCCCCCEEECCCCCCCCCCc
Confidence 556677788889999999999998878886 78899999999999999988889
Q ss_pred ccCcCCCCCCEEEcCCCCCCCCCCccccCC-CCCCCEEeccCCcc
Q 045323 151 WCLANLTYLRLLDVSFNQLTENISSSPLMN-LTYIEELWLSNNHF 194 (740)
Q Consensus 151 ~~l~~l~~L~~L~l~~n~l~~~i~~~~l~~-l~~L~~L~l~~n~~ 194 (740)
..++++++|++|++++|++++.+|. .+.. ..++..+++.+|..
T Consensus 484 ~~l~~L~~L~~L~Ls~N~l~g~iP~-~l~~~~~~~~~l~~~~N~~ 527 (623)
T PLN03150 484 ESLGQLTSLRILNLNGNSLSGRVPA-ALGGRLLHRASFNFTDNAG 527 (623)
T ss_pred hHHhcCCCCCEEECcCCcccccCCh-HHhhccccCceEEecCCcc
Confidence 8899999999999999999888887 4554 34667788887754
No 25
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.10 E-value=3e-11 Score=113.04 Aligned_cols=156 Identities=22% Similarity=0.193 Sum_probs=75.8
Q ss_pred ccccCCCCCCeeecCCCcceecCCcCCCCCCCCceEeCCCcccccCCCcCCCCCCCCCEEeCC-CCcCcCCchhhhcCCC
Q 045323 376 SKEFNLTKLKRLNLDGNHFIGDIPKTLSNCSALQGLYISDNNISGNIPTRLGNLSFLDAIMMP-NNRLEGPIPSAFCQLR 454 (740)
Q Consensus 376 ~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~-~n~~~~~~~~~l~~l~ 454 (740)
..+..+.+|+.+.++.|.-..+.. ....-|.|+.+.+....+... +. +--...+.-..-. ....++.....+....
T Consensus 208 f~l~~f~~l~~~~~s~~~~~~i~~-~~~~kptl~t~~v~~s~~~~~-~~-l~pe~~~~D~~~~E~~t~~G~~~~~~dTWq 284 (490)
T KOG1259|consen 208 FNLNAFRNLKTLKFSALSTENIVD-IELLKPTLQTICVHNTTIQDV-PS-LLPETILADPSGSEPSTSNGSALVSADTWQ 284 (490)
T ss_pred cchHHhhhhheeeeeccchhheec-eeecCchhheeeeeccccccc-cc-ccchhhhcCccCCCCCccCCceEEecchHh
Confidence 344456677777777774322111 111225677777666554421 11 1111111111111 0111122222233345
Q ss_pred CCCEEECCCCcCcccCCCCCCCCcccEEEcCCCcccCcCccccCCCcCCCCCCcccCCCCCCcEEecccCcccccCCccc
Q 045323 455 HLEILDLSRNNISGSLPSCSSPFNIRRVHLSKNMLQGPLLGDLSYNRLNSNIPDWMNRLPQLRYLILANNGLEGEMPLQL 534 (740)
Q Consensus 455 ~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~ 534 (740)
.|+++|+++|.|+..-.+..-.|.++.|++++|.|. .+ ..++.+++|+.||+|+|.++ ...++-
T Consensus 285 ~LtelDLS~N~I~~iDESvKL~Pkir~L~lS~N~i~--------------~v-~nLa~L~~L~~LDLS~N~Ls-~~~Gwh 348 (490)
T KOG1259|consen 285 ELTELDLSGNLITQIDESVKLAPKLRRLILSQNRIR--------------TV-QNLAELPQLQLLDLSGNLLA-ECVGWH 348 (490)
T ss_pred hhhhccccccchhhhhhhhhhccceeEEecccccee--------------ee-hhhhhcccceEeecccchhH-hhhhhH
Confidence 677888888877754444444566666666666553 11 22555666666666666665 333333
Q ss_pred cCCCCCCEEEccCCcC
Q 045323 535 CWLNKLQLVDLSHNNL 550 (740)
Q Consensus 535 ~~l~~L~~L~l~~n~~ 550 (740)
..+-++++|.+++|.+
T Consensus 349 ~KLGNIKtL~La~N~i 364 (490)
T KOG1259|consen 349 LKLGNIKTLKLAQNKI 364 (490)
T ss_pred hhhcCEeeeehhhhhH
Confidence 4455666666666654
No 26
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.10 E-value=3.9e-11 Score=108.39 Aligned_cols=134 Identities=24% Similarity=0.267 Sum_probs=52.8
Q ss_pred cccccccceeeCCCCCCCCCcEEeCCCCCCcCcccchhcccCCCCCEEECCCCCCCCccChhhhcCCCCCCEEEccCCcc
Q 045323 66 FTSFQQLELLDLSILNFKNLEYFNMDFCTAFSNSFLQMSELMASLKYLSLSNSYLNGTILDQGLCELVYLQEVNIDRNNL 145 (740)
Q Consensus 66 f~~~~~L~~Ldls~~~l~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~n~~~~~~~~~~~~~l~~L~~L~L~~n~l 145 (740)
+.+..+++.|+|.++.++.++.++.. +.+|++|++++|.|. .+. .+..+++|++|++++|.|
T Consensus 15 ~~n~~~~~~L~L~~n~I~~Ie~L~~~---------------l~~L~~L~Ls~N~I~-~l~--~l~~L~~L~~L~L~~N~I 76 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQISTIENLGAT---------------LDKLEVLDLSNNQIT-KLE--GLPGLPRLKTLDLSNNRI 76 (175)
T ss_dssp ---------------------S--TT----------------TT--EEE-TTS--S---T--T----TT--EEE--SS--
T ss_pred cccccccccccccccccccccchhhh---------------hcCCCEEECCCCCCc-ccc--CccChhhhhhcccCCCCC
Confidence 34455678888888888777754322 678999999999997 665 688899999999999999
Q ss_pred cccccccCcCCCCCCEEEcCCCCCCCCCCccccCCCCCCCEEeccCCcccccC--CccccccCCCccEEeCCCc
Q 045323 146 SGSLPWCLANLTYLRLLDVSFNQLTENISSSPLMNLTYIEELWLSNNHFQISI--SLEPFFNHSKLKFFDGDIY 217 (740)
Q Consensus 146 ~~~~~~~l~~l~~L~~L~l~~n~l~~~i~~~~l~~l~~L~~L~l~~n~~~~~~--~~~~~~~l~~L~~L~l~~~ 217 (740)
+...+.....+++|++|++++|++.+.-....+..+++|++|++.+|.+.... ....+..+++|+.||-...
T Consensus 77 ~~i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~~~V 150 (175)
T PF14580_consen 77 SSISEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDGQDV 150 (175)
T ss_dssp -S-CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETTEET
T ss_pred CccccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCCEEc
Confidence 86433223468999999999999866323235778999999999999886321 1123467788888877553
No 27
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.09 E-value=1.6e-10 Score=123.13 Aligned_cols=181 Identities=33% Similarity=0.498 Sum_probs=105.6
Q ss_pred CCCCCCEEECCCCcCcccCCCCCCCC-cccEEEcCCCcccCcCccccCCCcCCCCCCcccCCCCCCcEEecccCcccccC
Q 045323 452 QLRHLEILDLSRNNISGSLPSCSSPF-NIRRVHLSKNMLQGPLLGDLSYNRLNSNIPDWMNRLPQLRYLILANNGLEGEM 530 (740)
Q Consensus 452 ~l~~L~~L~l~~n~~~~~~~~~~~~~-~L~~L~l~~n~i~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~ 530 (740)
..+.++.|++.+|.++...+...... +|+.|++++|.+. .+|..+..+++|+.|++++|++. .+
T Consensus 114 ~~~~l~~L~l~~n~i~~i~~~~~~~~~nL~~L~l~~N~i~--------------~l~~~~~~l~~L~~L~l~~N~l~-~l 178 (394)
T COG4886 114 ELTNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIE--------------SLPSPLRNLPNLKNLDLSFNDLS-DL 178 (394)
T ss_pred cccceeEEecCCcccccCccccccchhhcccccccccchh--------------hhhhhhhccccccccccCCchhh-hh
Confidence 33555666666665553333222332 5666666666554 33445666777777777777777 34
Q ss_pred CccccCCCCCCEEEccCCcCcCCCCccccccccccccCCCCccCCCchhhccchhhHHhhhcccccceeeeeeeccccce
Q 045323 531 PLQLCWLNKLQLVDLSHNNLSGQIPHCLYNISFNYREDNHDLFDQDPQILYQLPQLQILYTNYHNHKYLTNFTTKQRLYT 610 (740)
Q Consensus 531 ~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~~~ 610 (740)
+......+.|+.|++++|.+. .+|...
T Consensus 179 ~~~~~~~~~L~~L~ls~N~i~-~l~~~~---------------------------------------------------- 205 (394)
T COG4886 179 PKLLSNLSNLNNLDLSGNKIS-DLPPEI---------------------------------------------------- 205 (394)
T ss_pred hhhhhhhhhhhheeccCCccc-cCchhh----------------------------------------------------
Confidence 443445677777777777765 222210
Q ss_pred eecccCCCccEEEcccCcccccChhhhhcCCCCcEEECcCCcCcccCCccccCCCCCCEEeCCCCccCccCCcccccCCc
Q 045323 611 YEVQPLHSMSGLDLSCNKLIGEIPLQIGELSRIHTLNLSHNNLTGESPVTFSHMKQVESLDLSYNNLNGKIPPRLIELNA 690 (740)
Q Consensus 611 ~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~ 690 (740)
.....|+++++++|++. ..+..+..+..+..+.+.+|++. ..+..++.+++++.|++++|.++. ++. +..+.+
T Consensus 206 ---~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~~-i~~-~~~~~~ 278 (394)
T COG4886 206 ---ELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQISS-ISS-LGSLTN 278 (394)
T ss_pred ---hhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccchhccccccceeccccccccc-ccc-ccccCc
Confidence 01124666666666443 45555666666666666777666 225555666667777777777763 332 666667
Q ss_pred CceeeccCcccccCCCC
Q 045323 691 LAVFSVAFNNLSGKTPD 707 (740)
Q Consensus 691 L~~L~ls~N~l~~~~~~ 707 (740)
|+.|++++|.++..+|.
T Consensus 279 l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 279 LRELDLSGNSLSNALPL 295 (394)
T ss_pred cCEEeccCccccccchh
Confidence 77777777766655444
No 28
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.07 E-value=2.3e-10 Score=121.81 Aligned_cols=194 Identities=30% Similarity=0.471 Sum_probs=156.8
Q ss_pred CEEECCCCcCcccCCCCCCCCcccEEEcCCCcccCcCccccCCCcCCCCCCcccCCCC-CCcEEecccCcccccCCcccc
Q 045323 457 EILDLSRNNISGSLPSCSSPFNIRRVHLSKNMLQGPLLGDLSYNRLNSNIPDWMNRLP-QLRYLILANNGLEGEMPLQLC 535 (740)
Q Consensus 457 ~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~~~~~~~~~-~L~~L~ls~n~l~~~~~~~~~ 535 (740)
..++...+.+............++.+++.+|.++ .++....... +|+.|++++|.+. .++..+.
T Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~l~~L~l~~n~i~--------------~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~ 160 (394)
T COG4886 96 PSLDLNLNRLRSNISELLELTNLTSLDLDNNNIT--------------DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLR 160 (394)
T ss_pred ceeeccccccccCchhhhcccceeEEecCCcccc--------------cCccccccchhhcccccccccchh-hhhhhhh
Confidence 4688888887555555555678999999999887 4555555564 8999999999998 4555688
Q ss_pred CCCCCCEEEccCCcCcCCCCccccccccccccCCCCccCCCchhhccchhhHHhhhcccccceeeeeeeccccceeeccc
Q 045323 536 WLNKLQLVDLSHNNLSGQIPHCLYNISFNYREDNHDLFDQDPQILYQLPQLQILYTNYHNHKYLTNFTTKQRLYTYEVQP 615 (740)
Q Consensus 536 ~l~~L~~L~l~~n~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (740)
.+++|+.|++++|++.. +|... ..
T Consensus 161 ~l~~L~~L~l~~N~l~~-l~~~~-------------------------------------------------------~~ 184 (394)
T COG4886 161 NLPNLKNLDLSFNDLSD-LPKLL-------------------------------------------------------SN 184 (394)
T ss_pred ccccccccccCCchhhh-hhhhh-------------------------------------------------------hh
Confidence 89999999999999862 22211 13
Q ss_pred CCCccEEEcccCcccccChhhhhcCCCCcEEECcCCcCcccCCccccCCCCCCEEeCCCCccCccCCcccccCCcCceee
Q 045323 616 LHSMSGLDLSCNKLIGEIPLQIGELSRIHTLNLSHNNLTGESPVTFSHMKQVESLDLSYNNLNGKIPPRLIELNALAVFS 695 (740)
Q Consensus 616 ~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ 695 (740)
.+.|+.|++++|++. .+|..+.....|++|.+++|++. ..+..+..++++..+.+++|++. ..+..+..++.++.|+
T Consensus 185 ~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~ 261 (394)
T COG4886 185 LSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLD 261 (394)
T ss_pred hhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccchhccccccceec
Confidence 458999999999998 77776667788999999999755 56777789999999999999998 4477888899999999
Q ss_pred ccCcccccCCCCcccCCCCccccccccCCCC
Q 045323 696 VAFNNLSGKTPDRVAQFGTFEEDSYEGNPFL 726 (740)
Q Consensus 696 ls~N~l~~~~~~~~~~~~~l~~l~l~~Np~~ 726 (740)
+++|.++...+ ++.+.+++.+++++|+..
T Consensus 262 ~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~ 290 (394)
T COG4886 262 LSNNQISSISS--LGSLTNLRELDLSGNSLS 290 (394)
T ss_pred ccccccccccc--ccccCccCEEeccCcccc
Confidence 99999997766 689999999999998764
No 29
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.05 E-value=5.9e-11 Score=111.05 Aligned_cols=132 Identities=25% Similarity=0.242 Sum_probs=89.8
Q ss_pred CCCcEEecccCcccccCCccccCCCCCCEEEccCCcCcCCCCccccccccccccCCCCccCCCchhhccchhhHHhhhcc
Q 045323 514 PQLRYLILANNGLEGEMPLQLCWLNKLQLVDLSHNNLSGQIPHCLYNISFNYREDNHDLFDQDPQILYQLPQLQILYTNY 593 (740)
Q Consensus 514 ~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~L~~l~~~~ 593 (740)
+.|+++|+|+|.|+ .+.+...-.|.++.|++++|.+...
T Consensus 284 q~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v---------------------------------------- 322 (490)
T KOG1259|consen 284 QELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV---------------------------------------- 322 (490)
T ss_pred hhhhhccccccchh-hhhhhhhhccceeEEeccccceeee----------------------------------------
Confidence 55777888888777 4445555667888888888876511
Q ss_pred cccceeeeeeeccccceeecccCCCccEEEcccCcccccChhhhhcCCCCcEEECcCCcCcccCCccccCCCCCCEEeCC
Q 045323 594 HNHKYLTNFTTKQRLYTYEVQPLHSMSGLDLSCNKLIGEIPLQIGELSRIHTLNLSHNNLTGESPVTFSHMKQVESLDLS 673 (740)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls 673 (740)
..+..+++|+.||+|+|.++ .+...-..+.+.++|.|++|.+. .-.+++.+=+|..||++
T Consensus 323 -----------------~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La~N~iE--~LSGL~KLYSLvnLDl~ 382 (490)
T KOG1259|consen 323 -----------------QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLAQNKIE--TLSGLRKLYSLVNLDLS 382 (490)
T ss_pred -----------------hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehhhhhHh--hhhhhHhhhhheecccc
Confidence 01233457788888888876 44444456778888888888776 33456666778888888
Q ss_pred CCccCccC-CcccccCCcCceeeccCcccccCCC
Q 045323 674 YNNLNGKI-PPRLIELNALAVFSVAFNNLSGKTP 706 (740)
Q Consensus 674 ~n~l~~~~-~~~l~~l~~L~~L~ls~N~l~~~~~ 706 (740)
.|+|.... -..+.++|.|+.+.|-+|++.+...
T Consensus 383 ~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 383 SNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred ccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 88887432 2466777888888888888876654
No 30
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.04 E-value=6.1e-12 Score=127.80 Aligned_cols=188 Identities=27% Similarity=0.503 Sum_probs=110.6
Q ss_pred eCCCcccccCCCcCCCCCCCCCEEeCCCCcCcCCchhhhcCCCCCCEEECCCCcCcccCCCCCCCCcccEEEcCCCcccC
Q 045323 412 YISDNNISGNIPTRLGNLSFLDAIMMPNNRLEGPIPSAFCQLRHLEILDLSRNNISGSLPSCSSPFNIRRVHLSKNMLQG 491 (740)
Q Consensus 412 ~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~i~~ 491 (740)
|++.|++. .+|..+..+..|+.+.++.|.+. .+|..+.++..|+.+|++.|++. .+|.....--|+.|.+++|+++
T Consensus 81 DlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lpLkvli~sNNkl~- 156 (722)
T KOG0532|consen 81 DLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLPLKVLIVSNNKLT- 156 (722)
T ss_pred hccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCcceeEEEecCccc-
Confidence 34444433 33333333444444444444443 34444455555555555555554 2222222234555555555554
Q ss_pred cCccccCCCcCCCCCCcccCCCCCCcEEecccCcccccCCccccCCCCCCEEEccCCcCcCCCCccccccccccccCCCC
Q 045323 492 PLLGDLSYNRLNSNIPDWMNRLPQLRYLILANNGLEGEMPLQLCWLNKLQLVDLSHNNLSGQIPHCLYNISFNYREDNHD 571 (740)
Q Consensus 492 ~~~~~l~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~~~~~~~~~ 571 (740)
.+|..++..+.|..||.+.|.+. .+|..++++.+|+.|.++.|.+. .+|..+..+
T Consensus 157 -------------~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L---------- 211 (722)
T KOG0532|consen 157 -------------SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL---------- 211 (722)
T ss_pred -------------cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC----------
Confidence 55666666777778888888776 56667777788888888877765 333332221
Q ss_pred ccCCCchhhccchhhHHhhhcccccceeeeeeeccccceeecccCCCccEEEcccCcccccChhhhhcCCCCcEEECcCC
Q 045323 572 LFDQDPQILYQLPQLQILYTNYHNHKYLTNFTTKQRLYTYEVQPLHSMSGLDLSCNKLIGEIPLQIGELSRIHTLNLSHN 651 (740)
Q Consensus 572 ~~~~~~~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~L~~N 651 (740)
.|..||+|+|++. .+|..|.+|+.|++|-|.+|
T Consensus 212 ----------------------------------------------pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenN 244 (722)
T KOG0532|consen 212 ----------------------------------------------PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENN 244 (722)
T ss_pred ----------------------------------------------ceeeeecccCcee-ecchhhhhhhhheeeeeccC
Confidence 4777888888887 78888888888888888888
Q ss_pred cCcccCCccccCCCC---CCEEeCCCCc
Q 045323 652 NLTGESPVTFSHMKQ---VESLDLSYNN 676 (740)
Q Consensus 652 ~l~~~~~~~l~~l~~---L~~L~Ls~n~ 676 (740)
.+. ..|..+..... .++|+..-++
T Consensus 245 PLq-SPPAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 245 PLQ-SPPAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred CCC-CChHHHHhccceeeeeeecchhcc
Confidence 888 55554432222 3455665553
No 31
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.03 E-value=3.6e-11 Score=118.64 Aligned_cols=87 Identities=22% Similarity=0.238 Sum_probs=38.3
Q ss_pred CCCCCEEECCCCCCCCccC-hhhhcCCCCCCEEEccCCccccc--ccccCcCCCCCCEEEcCCCCCCCCCCccccCCCCC
Q 045323 107 MASLKYLSLSNSYLNGTIL-DQGLCELVYLQEVNIDRNNLSGS--LPWCLANLTYLRLLDVSFNQLTENISSSPLMNLTY 183 (740)
Q Consensus 107 l~~L~~L~Ls~n~~~~~~~-~~~~~~l~~L~~L~L~~n~l~~~--~~~~l~~l~~L~~L~l~~n~l~~~i~~~~l~~l~~ 183 (740)
++.|+...|.++.+. ..+ .+....+++++.|||++|-+... .......+|+|+.|+++.|++..-.....-..+++
T Consensus 120 ~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~ 198 (505)
T KOG3207|consen 120 LKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSH 198 (505)
T ss_pred HHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhh
Confidence 455555555555443 111 12344555555555555544321 12223445555555555555433222211223444
Q ss_pred CCEEeccCCcc
Q 045323 184 IEELWLSNNHF 194 (740)
Q Consensus 184 L~~L~l~~n~~ 194 (740)
|+.|.++.|.+
T Consensus 199 lK~L~l~~CGl 209 (505)
T KOG3207|consen 199 LKQLVLNSCGL 209 (505)
T ss_pred hheEEeccCCC
Confidence 55555555444
No 32
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.02 E-value=5.5e-12 Score=128.11 Aligned_cols=196 Identities=26% Similarity=0.401 Sum_probs=151.7
Q ss_pred CCCCCCEEECCCCcCcccCCCCCCCCcccEEEcCCCcccCcCccccCCCcCCCCCCcccCCCCCCcEEecccCcccccCC
Q 045323 452 QLRHLEILDLSRNNISGSLPSCSSPFNIRRVHLSKNMLQGPLLGDLSYNRLNSNIPDWMNRLPQLRYLILANNGLEGEMP 531 (740)
Q Consensus 452 ~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~ 531 (740)
.+.--...|++.|++......+..+..|+.+.+..|.+. .+|..+..+..|..++++.|++. ..|
T Consensus 73 ~ltdt~~aDlsrNR~~elp~~~~~f~~Le~liLy~n~~r--------------~ip~~i~~L~~lt~l~ls~NqlS-~lp 137 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFSELPEEACAFVSLESLILYHNCIR--------------TIPEAICNLEALTFLDLSSNQLS-HLP 137 (722)
T ss_pred cccchhhhhccccccccCchHHHHHHHHHHHHHHhccce--------------ecchhhhhhhHHHHhhhccchhh-cCC
Confidence 445556778888888755555555777888888777765 67888888899999999999998 566
Q ss_pred ccccCCCCCCEEEccCCcCcCCCCccccccccccccCCCCccCCCchhhccchhhHHhhhcccccceeeeeeecccccee
Q 045323 532 LQLCWLNKLQLVDLSHNNLSGQIPHCLYNISFNYREDNHDLFDQDPQILYQLPQLQILYTNYHNHKYLTNFTTKQRLYTY 611 (740)
Q Consensus 532 ~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~~~~ 611 (740)
..++.+ -|+.|-+++|+++ .+|..++
T Consensus 138 ~~lC~l-pLkvli~sNNkl~-~lp~~ig---------------------------------------------------- 163 (722)
T KOG0532|consen 138 DGLCDL-PLKVLIVSNNKLT-SLPEEIG---------------------------------------------------- 163 (722)
T ss_pred hhhhcC-cceeEEEecCccc-cCCcccc----------------------------------------------------
Confidence 666655 5888999999885 4554333
Q ss_pred ecccCCCccEEEcccCcccccChhhhhcCCCCcEEECcCCcCcccCCccccCCCCCCEEeCCCCccCccCCcccccCCcC
Q 045323 612 EVQPLHSMSGLDLSCNKLIGEIPLQIGELSRIHTLNLSHNNLTGESPVTFSHMKQVESLDLSYNNLNGKIPPRLIELNAL 691 (740)
Q Consensus 612 ~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L 691 (740)
..+.|..||.++|++. .+|..+..+.+|+.|++..|++. ..|..+..+ .|..||+|.|+++ .+|..|.+|..|
T Consensus 164 ---~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis-~iPv~fr~m~~L 236 (722)
T KOG0532|consen 164 ---LLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS-YLPVDFRKMRHL 236 (722)
T ss_pred ---cchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee-ecchhhhhhhhh
Confidence 2347888999999997 78888999999999999999998 555555655 5899999999999 899999999999
Q ss_pred ceeeccCcccccCCCCc--ccCCCCccccccccC
Q 045323 692 AVFSVAFNNLSGKTPDR--VAQFGTFEEDSYEGN 723 (740)
Q Consensus 692 ~~L~ls~N~l~~~~~~~--~~~~~~l~~l~l~~N 723 (740)
++|.|.+|++...+... .+..--+++|+.+.+
T Consensus 237 q~l~LenNPLqSPPAqIC~kGkVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 237 QVLQLENNPLQSPPAQICEKGKVHIFKYLSTQAC 270 (722)
T ss_pred eeeeeccCCCCCChHHHHhccceeeeeeecchhc
Confidence 99999999998554432 133344677877764
No 33
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.01 E-value=2.7e-11 Score=116.20 Aligned_cols=255 Identities=21% Similarity=0.186 Sum_probs=122.8
Q ss_pred cccCCCCCEEECCCCCCCCcc---ChhhhcCCCCCCEEEccCCc---cccc-------ccccCcCCCCCCEEEcCCCCCC
Q 045323 104 SELMASLKYLSLSNSYLNGTI---LDQGLCELVYLQEVNIDRNN---LSGS-------LPWCLANLTYLRLLDVSFNQLT 170 (740)
Q Consensus 104 l~~l~~L~~L~Ls~n~~~~~~---~~~~~~~l~~L~~L~L~~n~---l~~~-------~~~~l~~l~~L~~L~l~~n~l~ 170 (740)
+..+..++.++|++|.+...- ....+.+.++|++.++++-- .... +..++..+++|++||||+|.+.
T Consensus 26 ~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G 105 (382)
T KOG1909|consen 26 LEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFG 105 (382)
T ss_pred hcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccC
Confidence 344566666666666654211 11234555666666666531 1111 2234556778888888888664
Q ss_pred CCCCc---cccCCCCCCCEEeccCCcccccCCccccccCCCccEEeCCCccccccccCCCCCCccccEEEecCCCCCCCC
Q 045323 171 ENISS---SPLMNLTYIEELWLSNNHFQISISLEPFFNHSKLKFFDGDIYAEIETSHSSLTPKFQLTSISLFGHGDSGIF 247 (740)
Q Consensus 171 ~~i~~---~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~ 247 (740)
...+. ..+..+..|++|.+.+|.+.. .....++. .|..|. .
T Consensus 106 ~~g~~~l~~ll~s~~~L~eL~L~N~Glg~-~ag~~l~~--------------------------al~~l~-~-------- 149 (382)
T KOG1909|consen 106 PKGIRGLEELLSSCTDLEELYLNNCGLGP-EAGGRLGR--------------------------ALFELA-V-------- 149 (382)
T ss_pred ccchHHHHHHHHhccCHHHHhhhcCCCCh-hHHHHHHH--------------------------HHHHHH-H--------
Confidence 32222 134557778888888887641 11110000 011111 0
Q ss_pred ChhhcCCCCCCEEEcCCCCCCCCCCh---hHHhcCCCCCEEEccCCccccc----CCCCCCCCCCCCEEEccCCcccccC
Q 045323 248 PKFLYHQHDLEYVDLSHLNLTREFPN---WLLEKNKKLKRLSLVNISLFGP----FPLPIHCHKNLRVLDVSNNKLQGHI 320 (740)
Q Consensus 248 ~~~l~~l~~L~~L~L~~~~~~~~~~~---~~~~~~~~L~~L~L~~~~~~~~----~~~~l~~~~~L~~L~l~~~~l~~~~ 320 (740)
......-+.|+++...+|++.+.... ..+...+.|+++.+..|.+... ....+..+++|+.||+.+|.++...
T Consensus 150 ~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~eg 229 (382)
T KOG1909|consen 150 NKKAASKPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEG 229 (382)
T ss_pred HhccCCCcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHH
Confidence 00011223555555555555432211 1233445566666665554221 1234566777777777777666333
Q ss_pred chhhhh---cCCCCcEEeccCCcccccCCCCccCcCccccCCccEEEccCCCCCCcC----cccccCCCCCCeeecCCCc
Q 045323 321 PIEIGE---VLPNLVVLNVATNAFNGSIPSSFGNTWPWGCFYLEYLVLSNNSLQGQL----FSKEFNLTKLKRLNLDGNH 393 (740)
Q Consensus 321 ~~~~~~---~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~----~~~~~~l~~L~~L~l~~n~ 393 (740)
...+.. .+++|+.+++++|.+.......+.....-..++|+++.+.+|.|+... .......|.|+.|++++|.
T Consensus 230 s~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~ 309 (382)
T KOG1909|consen 230 SVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNR 309 (382)
T ss_pred HHHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccc
Confidence 333222 244566666666666544443333322222345666666666554211 1122234555555555555
Q ss_pred c
Q 045323 394 F 394 (740)
Q Consensus 394 ~ 394 (740)
+
T Consensus 310 l 310 (382)
T KOG1909|consen 310 L 310 (382)
T ss_pred c
Confidence 5
No 34
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.00 E-value=1.9e-10 Score=103.97 Aligned_cols=108 Identities=25% Similarity=0.376 Sum_probs=41.6
Q ss_pred ccCCCccEEEcccCcccccChhhhh-cCCCCcEEECcCCcCcccCCccccCCCCCCEEeCCCCccCccCCccc-ccCCcC
Q 045323 614 QPLHSMSGLDLSCNKLIGEIPLQIG-ELSRIHTLNLSHNNLTGESPVTFSHMKQVESLDLSYNNLNGKIPPRL-IELNAL 691 (740)
Q Consensus 614 ~~~~~L~~L~ls~n~l~~~~~~~l~-~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l-~~l~~L 691 (740)
.++..+++|++++|.|+. + +.+. .+.+|+.|+|++|+++.. +++..++.|++|++++|+|+ .+++.+ ..+++|
T Consensus 16 ~n~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L 90 (175)
T PF14580_consen 16 NNPVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNL 90 (175)
T ss_dssp ----------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS----S-CHHHHHH-TT-
T ss_pred cccccccccccccccccc-c-cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCC-ccccchHHhCCcC
Confidence 344578999999999973 3 3455 578999999999999943 35788999999999999998 455455 468999
Q ss_pred ceeeccCcccccCCC-CcccCCCCccccccccCCCC
Q 045323 692 AVFSVAFNNLSGKTP-DRVAQFGTFEEDSYEGNPFL 726 (740)
Q Consensus 692 ~~L~ls~N~l~~~~~-~~~~~~~~l~~l~l~~Np~~ 726 (740)
+.|++++|++..... ..++.+++|+.|++.|||..
T Consensus 91 ~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 91 QELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp -EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 999999999976533 33567889999999999984
No 35
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.00 E-value=8.6e-11 Score=115.97 Aligned_cols=206 Identities=27% Similarity=0.286 Sum_probs=87.4
Q ss_pred CCCCEEEccCCcccccCC-CCCCCCCCCCEEEccCCcccccCc-hhhhhcCCCCcEEeccCCcccccCCCCccCcCcccc
Q 045323 280 KKLKRLSLVNISLFGPFP-LPIHCHKNLRVLDVSNNKLQGHIP-IEIGEVLPNLVVLNVATNAFNGSIPSSFGNTWPWGC 357 (740)
Q Consensus 280 ~~L~~L~L~~~~~~~~~~-~~l~~~~~L~~L~l~~~~l~~~~~-~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~ 357 (740)
++|+++.|.++.+..... .....+++++.||++.|-+....+ ..+...+|+|+.|+++.|.+......... ..+
T Consensus 121 kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~----~~l 196 (505)
T KOG3207|consen 121 KKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTT----LLL 196 (505)
T ss_pred HhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccch----hhh
Confidence 344444444444322111 233445556666666655442222 12333456666666666655421111100 012
Q ss_pred CCccEEEccCCCCCC-cCcccccCCCCCCeeecCCCcceecCCcCCCCCCCCceEeCCCcccccCC-CcCCCCCCCCCEE
Q 045323 358 FYLEYLVLSNNSLQG-QLFSKEFNLTKLKRLNLDGNHFIGDIPKTLSNCSALQGLYISDNNISGNI-PTRLGNLSFLDAI 435 (740)
Q Consensus 358 ~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~i~~~~-~~~~~~l~~L~~L 435 (740)
++|+.|.++.|.++- ........+|+|+.|++.+|............+..|+.|++++|.+.... ....+.++.|..|
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~L 276 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQL 276 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhh
Confidence 245555555555542 11122234555555555555321111112233345555555555544211 1233445555555
Q ss_pred eCCCCcCcCC-chhh-----hcCCCCCCEEECCCCcCc--ccCCCCCCCCcccEEEcCCCcc
Q 045323 436 MMPNNRLEGP-IPSA-----FCQLRHLEILDLSRNNIS--GSLPSCSSPFNIRRVHLSKNML 489 (740)
Q Consensus 436 ~l~~n~~~~~-~~~~-----l~~l~~L~~L~l~~n~~~--~~~~~~~~~~~L~~L~l~~n~i 489 (740)
+++.|.+... .|+. ...+++|++|++..|++. ..+......++|+.|.+..|.+
T Consensus 277 nls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~l 338 (505)
T KOG3207|consen 277 NLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYL 338 (505)
T ss_pred hccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhcccccc
Confidence 5555544321 1111 234455666666665553 1122222244444444444444
No 36
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.93 E-value=4.2e-11 Score=114.95 Aligned_cols=88 Identities=22% Similarity=0.293 Sum_probs=51.9
Q ss_pred ccCCCccEEEcccCccccc----ChhhhhcCCCCcEEECcCCcCcccCCccc-----cCCCCCCEEeCCCCccCc----c
Q 045323 614 QPLHSMSGLDLSCNKLIGE----IPLQIGELSRIHTLNLSHNNLTGESPVTF-----SHMKQVESLDLSYNNLNG----K 680 (740)
Q Consensus 614 ~~~~~L~~L~ls~n~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~~~~~l-----~~l~~L~~L~Ls~n~l~~----~ 680 (740)
..+++|+.|||++|.++.+ +.+.++.+++|+.|+++.|.+.......| ...++|+.|.+.+|.|+. .
T Consensus 210 ~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~ 289 (382)
T KOG1909|consen 210 EHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALA 289 (382)
T ss_pred HhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHH
Confidence 3445666666666666433 23445556667777777776664433222 235677777777777762 2
Q ss_pred CCcccccCCcCceeeccCccc
Q 045323 681 IPPRLIELNALAVFSVAFNNL 701 (740)
Q Consensus 681 ~~~~l~~l~~L~~L~ls~N~l 701 (740)
+..++...+.|+.|+|++|.+
T Consensus 290 la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 290 LAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred HHHHHhcchhhHHhcCCcccc
Confidence 233444567777777777777
No 37
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.86 E-value=2.4e-10 Score=121.60 Aligned_cols=226 Identities=23% Similarity=0.252 Sum_probs=118.2
Q ss_pred CCCCCCCCEEeCCCCcCcCCchhhhcCCCCCCEEECCCCcCcccCCCCCCCCcccEEEcCCCcccCcCccccCCCcCCCC
Q 045323 426 LGNLSFLDAIMMPNNRLEGPIPSAFCQLRHLEILDLSRNNISGSLPSCSSPFNIRRVHLSKNMLQGPLLGDLSYNRLNSN 505 (740)
Q Consensus 426 ~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~ 505 (740)
+..+.+|+.+++.+|.+..+ ...+..+++|++|++++|.|+ .+.....++.|+.|++++|.|+..
T Consensus 91 l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~-~i~~l~~l~~L~~L~l~~N~i~~~------------- 155 (414)
T KOG0531|consen 91 LSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKIT-KLEGLSTLTLLKELNLSGNLISDI------------- 155 (414)
T ss_pred cccccceeeeeccccchhhc-ccchhhhhcchheeccccccc-cccchhhccchhhheeccCcchhc-------------
Confidence 44444555555555554422 111445566666666666665 333334444466666666665421
Q ss_pred CCcccCCCCCCcEEecccCcccccCC-ccccCCCCCCEEEccCCcCcCCCCccccccccccccCCCCccCCCchhhccch
Q 045323 506 IPDWMNRLPQLRYLILANNGLEGEMP-LQLCWLNKLQLVDLSHNNLSGQIPHCLYNISFNYREDNHDLFDQDPQILYQLP 584 (740)
Q Consensus 506 ~~~~~~~~~~L~~L~ls~n~l~~~~~-~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 584 (740)
..+..+++|+.+++++|.+....+ . ...+.+++.+++.+|.+...-. +..+.
T Consensus 156 --~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i~~------------------------~~~~~ 208 (414)
T KOG0531|consen 156 --SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREIEG------------------------LDLLK 208 (414)
T ss_pred --cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcccc------------------------hHHHH
Confidence 224446777777777777764333 2 4566777777777776642110 00011
Q ss_pred hhHHhhhcccccceeeeeeeccccceeecccCC--CccEEEcccCcccccChhhhhcCCCCcEEECcCCcCcccCCcccc
Q 045323 585 QLQILYTNYHNHKYLTNFTTKQRLYTYEVQPLH--SMSGLDLSCNKLIGEIPLQIGELSRIHTLNLSHNNLTGESPVTFS 662 (740)
Q Consensus 585 ~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~ 662 (740)
.+..+....+.+..+ ....... .|+.+++++|.+. ..+..+..+..+..|++.+|++.. -..+.
T Consensus 209 ~l~~~~l~~n~i~~~-----------~~l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~--~~~~~ 274 (414)
T KOG0531|consen 209 KLVLLSLLDNKISKL-----------EGLNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISN--LEGLE 274 (414)
T ss_pred HHHHhhcccccceec-----------cCcccchhHHHHHHhcccCccc-cccccccccccccccchhhccccc--ccccc
Confidence 111111111111110 0011111 2677778887776 443556677777888888777763 22344
Q ss_pred CCCCCCEEeCCCCccCcc---CCc-ccccCCcCceeeccCcccccCCCC
Q 045323 663 HMKQVESLDLSYNNLNGK---IPP-RLIELNALAVFSVAFNNLSGKTPD 707 (740)
Q Consensus 663 ~l~~L~~L~Ls~n~l~~~---~~~-~l~~l~~L~~L~ls~N~l~~~~~~ 707 (740)
..+.+..+....|.+... ... .....+.++...+.+|+.....+.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (414)
T KOG0531|consen 275 RLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKISSL 323 (414)
T ss_pred ccchHHHhccCcchhcchhhhhccccccccccccccccccCcccccccc
Confidence 556666777777776521 111 144556777778888877665553
No 38
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.86 E-value=1.5e-09 Score=80.39 Aligned_cols=59 Identities=37% Similarity=0.547 Sum_probs=28.8
Q ss_pred CCcEEECcCCcCcccCCccccCCCCCCEEeCCCCccCccCCcccccCCcCceeeccCcc
Q 045323 642 RIHTLNLSHNNLTGESPVTFSHMKQVESLDLSYNNLNGKIPPRLIELNALAVFSVAFNN 700 (740)
Q Consensus 642 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~ 700 (740)
+|++|++++|+++...+..|..+++|++|++++|+++...|..|..+++|+.|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34445555554444444444445555555555555544444444455555555555544
No 39
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.80 E-value=3.7e-09 Score=78.31 Aligned_cols=61 Identities=44% Similarity=0.585 Sum_probs=57.4
Q ss_pred CCccEEEcccCcccccChhhhhcCCCCcEEECcCCcCcccCCccccCCCCCCEEeCCCCcc
Q 045323 617 HSMSGLDLSCNKLIGEIPLQIGELSRIHTLNLSHNNLTGESPVTFSHMKQVESLDLSYNNL 677 (740)
Q Consensus 617 ~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~n~l 677 (740)
++|+.|++++|++....+..|..+++|++|++++|.++...+..|..+++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4789999999999977778999999999999999999999999999999999999999986
No 40
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.78 E-value=2.8e-10 Score=118.98 Aligned_cols=117 Identities=24% Similarity=0.284 Sum_probs=92.2
Q ss_pred eecccCCCccEEEcccCcccccChhhhhcCCCCcEEECcCCcCcccCCccccCCCCCCEEeCCCCccCccCCcccccCCc
Q 045323 611 YEVQPLHSMSGLDLSCNKLIGEIPLQIGELSRIHTLNLSHNNLTGESPVTFSHMKQVESLDLSYNNLNGKIPPRLIELNA 690 (740)
Q Consensus 611 ~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~ 690 (740)
..++.++.++.||||+|+++.. +.+..++.|++|||++|.++...--....+. |+.|.|++|-++.. .+++++.+
T Consensus 181 ~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~tL--~gie~Lks 255 (1096)
T KOG1859|consen 181 ESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALTTL--RGIENLKS 255 (1096)
T ss_pred HHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhhh-heeeeecccHHHhh--hhHHhhhh
Confidence 3456678999999999999733 3789999999999999999954444444454 99999999999843 57889999
Q ss_pred CceeeccCcccccCCCC-cccCCCCccccccccCCCCCCcCCC
Q 045323 691 LAVFSVAFNNLSGKTPD-RVAQFGTFEEDSYEGNPFLCGQPLL 732 (740)
Q Consensus 691 L~~L~ls~N~l~~~~~~-~~~~~~~l~~l~l~~Np~~c~~~l~ 732 (740)
|+.||+++|-+.+...- .+..+.+|..|.|+|||..|...-+
T Consensus 256 L~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~p~hR 298 (1096)
T KOG1859|consen 256 LYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCAPWHR 298 (1096)
T ss_pred hhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccCHHHH
Confidence 99999999988655332 1345678899999999999976533
No 41
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.70 E-value=3.8e-10 Score=105.78 Aligned_cols=195 Identities=19% Similarity=0.117 Sum_probs=102.5
Q ss_pred CCCEEEccCCccccc-ccccCcCCCCCCEEEcCCCCCCCCCCccccCCCCCCCEEeccCCc-ccccCCccccccCCCccE
Q 045323 134 YLQEVNIDRNNLSGS-LPWCLANLTYLRLLDVSFNQLTENISSSPLMNLTYIEELWLSNNH-FQISISLEPFFNHSKLKF 211 (740)
Q Consensus 134 ~L~~L~L~~n~l~~~-~~~~l~~l~~L~~L~l~~n~l~~~i~~~~l~~l~~L~~L~l~~n~-~~~~~~~~~~~~l~~L~~ 211 (740)
.|++|||++..|+.. +...++.|.+|+.|.+.++++.+.|.. .+++-.+|+.|+++.+. ++.....-.+.+++.|..
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~-~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~ 264 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVN-TIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDE 264 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHH-HHhccccceeeccccccccchhHHHHHHHhhhhHhh
Confidence 356666665555321 222344556666666666665554444 45555566666665543 221111122345555555
Q ss_pred EeCCCcccccc----ccCCCCCCccccEEEecCCCC---CCCCChhhcCCCCCCEEEcCCCCCCCCCChhHHhcCCCCCE
Q 045323 212 FDGDIYAEIET----SHSSLTPKFQLTSISLFGHGD---SGIFPKFLYHQHDLEYVDLSHLNLTREFPNWLLEKNKKLKR 284 (740)
Q Consensus 212 L~l~~~~~~~~----~~~~~~~~~~L~~L~l~~~~~---~~~~~~~l~~l~~L~~L~L~~~~~~~~~~~~~~~~~~~L~~ 284 (740)
|+++++..... ...... .+|+.|+++|+.- ...+..-...+++|.+|||++|......-...+-.++.|++
T Consensus 265 LNlsWc~l~~~~Vtv~V~his--e~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~ 342 (419)
T KOG2120|consen 265 LNLSWCFLFTEKVTVAVAHIS--ETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQH 342 (419)
T ss_pred cCchHhhccchhhhHHHhhhc--hhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchhee
Confidence 55555322211 111111 2788888888731 11233344578889999998875432222222347788888
Q ss_pred EEccCCccccc-CCCCCCCCCCCCEEEccCCcccccCchhhhhcCCCCc
Q 045323 285 LSLVNISLFGP-FPLPIHCHKNLRVLDVSNNKLQGHIPIEIGEVLPNLV 332 (740)
Q Consensus 285 L~L~~~~~~~~-~~~~l~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~L~ 332 (740)
|.++.|..... .-..+...|.|.+|++.++--. .-.+.+...+++|+
T Consensus 343 lSlsRCY~i~p~~~~~l~s~psl~yLdv~g~vsd-t~mel~~e~~~~lk 390 (419)
T KOG2120|consen 343 LSLSRCYDIIPETLLELNSKPSLVYLDVFGCVSD-TTMELLKEMLSHLK 390 (419)
T ss_pred eehhhhcCCChHHeeeeccCcceEEEEeccccCc-hHHHHHHHhCcccc
Confidence 88888864321 1233556678888888776433 22333333345544
No 42
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.69 E-value=2.1e-09 Score=114.45 Aligned_cols=246 Identities=25% Similarity=0.249 Sum_probs=130.0
Q ss_pred CccEEEccCCCCCCcCcccccCCCCCCeeecCCCcceecCCcCCCCCCCCceEeCCCcccccCCCcCCCCCCCCCEEeCC
Q 045323 359 YLEYLVLSNNSLQGQLFSKEFNLTKLKRLNLDGNHFIGDIPKTLSNCSALQGLYISDNNISGNIPTRLGNLSFLDAIMMP 438 (740)
Q Consensus 359 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~ 438 (740)
.++.+.++.|.+.. ....+..+.+|+.|++.+|.+..... .+..+++|++|++++|.|+.. ..+..++.|+.|++.
T Consensus 73 ~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i~~-~l~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~L~l~ 148 (414)
T KOG0531|consen 73 SLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKIEN-LLSSLVNLQVLDLSFNKITKL--EGLSTLTLLKELNLS 148 (414)
T ss_pred hHHhhccchhhhhh-hhcccccccceeeeeccccchhhccc-chhhhhcchheeccccccccc--cchhhccchhhheec
Confidence 45555566555553 11224445566666666666553322 134455666666666666533 334445556666666
Q ss_pred CCcCcCCchhhhcCCCCCCEEECCCCcCcccCCC-CCCCCcccEEEcCCCcccCcCccccCCCcCCCCCCcccCCCCCCc
Q 045323 439 NNRLEGPIPSAFCQLRHLEILDLSRNNISGSLPS-CSSPFNIRRVHLSKNMLQGPLLGDLSYNRLNSNIPDWMNRLPQLR 517 (740)
Q Consensus 439 ~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~-~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~~~~~~~~~~L~ 517 (740)
+|.+... ..+..++.|+.+++++|.+...-+. ...+.+++.+++.+|.+.. ...+..+..+.
T Consensus 149 ~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~~~~~~~l~~l~l~~n~i~~---------------i~~~~~~~~l~ 211 (414)
T KOG0531|consen 149 GNLISDI--SGLESLKSLKLLDLSYNRIVDIENDELSELISLEELDLGGNSIRE---------------IEGLDLLKKLV 211 (414)
T ss_pred cCcchhc--cCCccchhhhcccCCcchhhhhhhhhhhhccchHHHhccCCchhc---------------ccchHHHHHHH
Confidence 6655422 2233455566666666655522221 2334455555555554431 11122233333
Q ss_pred EEecccCcccccCCccccCCC--CCCEEEccCCcCcCCCCccccccccccccCCCCccCCCchhhccchhhHHhhhcccc
Q 045323 518 YLILANNGLEGEMPLQLCWLN--KLQLVDLSHNNLSGQIPHCLYNISFNYREDNHDLFDQDPQILYQLPQLQILYTNYHN 595 (740)
Q Consensus 518 ~L~ls~n~l~~~~~~~~~~l~--~L~~L~l~~n~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~L~~l~~~~~~ 595 (740)
.+++..|.++...+ +..+. +|+.+++++|++.
T Consensus 212 ~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~-------------------------------------------- 245 (414)
T KOG0531|consen 212 LLSLLDNKISKLEG--LNELVMLHLRELYLSGNRIS-------------------------------------------- 245 (414)
T ss_pred HhhcccccceeccC--cccchhHHHHHHhcccCccc--------------------------------------------
Confidence 33445554442211 11111 2455555555443
Q ss_pred cceeeeeeeccccceeecccCCCccEEEcccCcccccChhhhhcCCCCcEEECcCCcCccc---CCc-cccCCCCCCEEe
Q 045323 596 HKYLTNFTTKQRLYTYEVQPLHSMSGLDLSCNKLIGEIPLQIGELSRIHTLNLSHNNLTGE---SPV-TFSHMKQVESLD 671 (740)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~---~~~-~l~~l~~L~~L~ 671 (740)
... ..+..+..+..+++++|++.. -..+.....+..+.+..|.+... ... ..+..+.++...
T Consensus 246 --~~~----------~~~~~~~~l~~l~~~~n~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (414)
T KOG0531|consen 246 --RSP----------EGLENLKNLPVLDLSSNRISN--LEGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLT 311 (414)
T ss_pred --ccc----------ccccccccccccchhhccccc--cccccccchHHHhccCcchhcchhhhhccccccccccccccc
Confidence 210 233456688999999999863 23456678888888888876632 222 246778999999
Q ss_pred CCCCccCccCCccc
Q 045323 672 LSYNNLNGKIPPRL 685 (740)
Q Consensus 672 Ls~n~l~~~~~~~l 685 (740)
+..|.+....+...
T Consensus 312 ~~~~~~~~~~~~~~ 325 (414)
T KOG0531|consen 312 LELNPIRKISSLDL 325 (414)
T ss_pred cccCcccccccccH
Confidence 99999986555433
No 43
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.68 E-value=7.5e-09 Score=117.59 Aligned_cols=89 Identities=25% Similarity=0.319 Sum_probs=67.2
Q ss_pred hhcccCCCCCEEECCCCCCCCccChhhhcCCCCCCEEEccCCcccccccccCcCCCCCCEEEcCCCCCCCCCCccccCCC
Q 045323 102 QMSELMASLKYLSLSNSYLNGTILDQGLCELVYLQEVNIDRNNLSGSLPWCLANLTYLRLLDVSFNQLTENISSSPLMNL 181 (740)
Q Consensus 102 ~~l~~l~~L~~L~Ls~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~i~~~~l~~l 181 (740)
..|..++.|++|||++|.-.+.+|. .++.+.+||+|+++++.+. .+|..+++++.|.+|++..+.....++. ....+
T Consensus 565 ~ff~~m~~LrVLDLs~~~~l~~LP~-~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~-i~~~L 641 (889)
T KOG4658|consen 565 EFFRSLPLLRVLDLSGNSSLSKLPS-SIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPG-ILLEL 641 (889)
T ss_pred HHHhhCcceEEEECCCCCccCcCCh-HHhhhhhhhcccccCCCcc-ccchHHHHHHhhheeccccccccccccc-hhhhc
Confidence 3466688888888887765556775 7888888888888888887 6788888888888888888765443433 45558
Q ss_pred CCCCEEeccCCc
Q 045323 182 TYIEELWLSNNH 193 (740)
Q Consensus 182 ~~L~~L~l~~n~ 193 (740)
++||+|.+....
T Consensus 642 ~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 642 QSLRVLRLPRSA 653 (889)
T ss_pred ccccEEEeeccc
Confidence 888888876654
No 44
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.53 E-value=1e-07 Score=108.61 Aligned_cols=276 Identities=21% Similarity=0.223 Sum_probs=143.4
Q ss_pred CCccEEEccCCC--CCCcCcccccCCCCCCeeecCCCcceecCCcCCCCCCCCceEeCCCcccccCCCcCCCCCCCCCEE
Q 045323 358 FYLEYLVLSNNS--LQGQLFSKEFNLTKLKRLNLDGNHFIGDIPKTLSNCSALQGLYISDNNISGNIPTRLGNLSFLDAI 435 (740)
Q Consensus 358 ~~L~~L~l~~n~--l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L 435 (740)
+.|++|-+..|. +.......|..++.|+.||+++|.-.+.+|..++.+-+|++|+++++.+. .+|..++++..|.+|
T Consensus 545 ~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~L 623 (889)
T KOG4658|consen 545 PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYL 623 (889)
T ss_pred CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhhee
Confidence 356666666664 33333344556677777777776655566766777777777777777776 666777777777777
Q ss_pred eCCCCcCcCCchhhhcCCCCCCEEECCCCcCcccCC---CCCCCCcccEEEcCCCcccCcCccccCCCcCCCCCCcccCC
Q 045323 436 MMPNNRLEGPIPSAFCQLRHLEILDLSRNNISGSLP---SCSSPFNIRRVHLSKNMLQGPLLGDLSYNRLNSNIPDWMNR 512 (740)
Q Consensus 436 ~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~---~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~~~~~~~ 512 (740)
++..+......+.....+++|++|.+..-....... ....+.+|+.+....... .+-..+..
T Consensus 624 nl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~---------------~~~e~l~~ 688 (889)
T KOG4658|consen 624 NLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSV---------------LLLEDLLG 688 (889)
T ss_pred ccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchh---------------HhHhhhhh
Confidence 777665544445555567777777765543211111 112233333333322211 00001112
Q ss_pred CCCCc----EEecccCcccccCCccccCCCCCCEEEccCCcCcCCCCccccccccccccCCCCccCCCchhhc-cchhhH
Q 045323 513 LPQLR----YLILANNGLEGEMPLQLCWLNKLQLVDLSHNNLSGQIPHCLYNISFNYREDNHDLFDQDPQILY-QLPQLQ 587 (740)
Q Consensus 513 ~~~L~----~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~-~l~~L~ 587 (740)
++.|. .+.+.++... ..+..+..+.+|+.|.+.+|.+............ .. .++.+.
T Consensus 689 ~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~-----------------~~~~f~~l~ 750 (889)
T KOG4658|consen 689 MTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLI-----------------VLLCFPNLS 750 (889)
T ss_pred hHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccc-----------------hhhhHHHHH
Confidence 22222 2222222222 3445567788999999999987532222111111 01 122333
Q ss_pred HhhhcccccceeeeeeeccccceeecccCCCccEEEcccCcccccChhhhhcCCCCcEEECcCCcCccc-CCccccCCCC
Q 045323 588 ILYTNYHNHKYLTNFTTKQRLYTYEVQPLHSMSGLDLSCNKLIGEIPLQIGELSRIHTLNLSHNNLTGE-SPVTFSHMKQ 666 (740)
Q Consensus 588 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~-~~~~l~~l~~ 666 (740)
........... ........++|+.|.+.++.....+......+..+..+-+..+.+.+. .-...+.+++
T Consensus 751 ~~~~~~~~~~r----------~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l~~~~~l~~l~~ 820 (889)
T KOG4658|consen 751 KVSILNCHMLR----------DLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGLRMLCSLGGLPQ 820 (889)
T ss_pred HHHhhcccccc----------ccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEecccccccceeeecCCCCce
Confidence 32221111100 001113456888888888876655555556666677666666666654 2444455555
Q ss_pred CCEEeCCCCcc
Q 045323 667 VESLDLSYNNL 677 (740)
Q Consensus 667 L~~L~Ls~n~l 677 (740)
+..+.+++=.+
T Consensus 821 i~~~~l~~~~l 831 (889)
T KOG4658|consen 821 LYWLPLSFLKL 831 (889)
T ss_pred eEecccCccch
Confidence 55555544443
No 45
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.49 E-value=2.3e-09 Score=100.69 Aligned_cols=181 Identities=21% Similarity=0.084 Sum_probs=89.0
Q ss_pred CCCEEEcCCCCCCCCCChhHHhcCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCc-ccccCchhhhhcCCCCcEE
Q 045323 256 DLEYVDLSHLNLTREFPNWLLEKNKKLKRLSLVNISLFGPFPLPIHCHKNLRVLDVSNNK-LQGHIPIEIGEVLPNLVVL 334 (740)
Q Consensus 256 ~L~~L~L~~~~~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~L~~L~l~~~~-l~~~~~~~~~~~l~~L~~L 334 (740)
.|+++||++..++..-...+...+.+|+.|.+.++.+.+.+...+.+..+|+.|+++.+. ++......++..+..|..|
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~L 265 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDEL 265 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhc
Confidence 466666666666544444445566667777777666665555556666667777776653 4433333444456667777
Q ss_pred eccCCcccccCC-CCccCcCccccCCccEEEccCCCC--CC-cCcccccCCCCCCeeecCCCcc-eecCCcCCCCCCCCc
Q 045323 335 NVATNAFNGSIP-SSFGNTWPWGCFYLEYLVLSNNSL--QG-QLFSKEFNLTKLKRLNLDGNHF-IGDIPKTLSNCSALQ 409 (740)
Q Consensus 335 ~l~~n~~~~~~~-~~~~~~~~~~~~~L~~L~l~~n~l--~~-~~~~~~~~l~~L~~L~l~~n~~-~~~~~~~l~~~~~L~ 409 (740)
+++.|.+..... ..+.... ++|+.|+++++.- .. ....-...+|+|..||+++|.. +......+..++.|+
T Consensus 266 NlsWc~l~~~~Vtv~V~his----e~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~ 341 (419)
T KOG2120|consen 266 NLSWCFLFTEKVTVAVAHIS----ETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQ 341 (419)
T ss_pred CchHhhccchhhhHHHhhhc----hhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchhe
Confidence 777766543221 1111111 1556666665421 11 1111123455666666665532 211222334455555
Q ss_pred eEeCCCcccc-cCCCcCCCCCCCCCEEeCCCC
Q 045323 410 GLYISDNNIS-GNIPTRLGNLSFLDAIMMPNN 440 (740)
Q Consensus 410 ~L~l~~n~i~-~~~~~~~~~l~~L~~L~l~~n 440 (740)
+|.++.|..- ....-.+...+.|.+|++.++
T Consensus 342 ~lSlsRCY~i~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 342 HLSLSRCYDIIPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred eeehhhhcCCChHHeeeeccCcceEEEEeccc
Confidence 5555555321 011112344455555555544
No 46
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.39 E-value=4.2e-09 Score=110.44 Aligned_cols=81 Identities=26% Similarity=0.307 Sum_probs=58.2
Q ss_pred CCCEEECCCCCCCCccChhhhcCCCCCCEEEccCCcccccccccCcCCCCCCEEEcCCCCCCCCCCccccCCCCCCCEEe
Q 045323 109 SLKYLSLSNSYLNGTILDQGLCELVYLQEVNIDRNNLSGSLPWCLANLTYLRLLDVSFNQLTENISSSPLMNLTYIEELW 188 (740)
Q Consensus 109 ~L~~L~Ls~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~i~~~~l~~l~~L~~L~ 188 (740)
.|.+.++++|.+. .+. ..+.-++.|+.|+|++|++++.. .+..|++|++|||++|.+.. +|......+. |+.|.
T Consensus 165 ~L~~a~fsyN~L~-~mD-~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~-vp~l~~~gc~-L~~L~ 238 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMD-ESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRH-VPQLSMVGCK-LQLLN 238 (1096)
T ss_pred hHhhhhcchhhHH-hHH-HHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhcc-ccccchhhhh-heeee
Confidence 4677777888774 333 36777888888888888887543 67788888888888888754 6653344444 88888
Q ss_pred ccCCccc
Q 045323 189 LSNNHFQ 195 (740)
Q Consensus 189 l~~n~~~ 195 (740)
+++|.++
T Consensus 239 lrnN~l~ 245 (1096)
T KOG1859|consen 239 LRNNALT 245 (1096)
T ss_pred ecccHHH
Confidence 8888765
No 47
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.23 E-value=2.5e-07 Score=86.07 Aligned_cols=38 Identities=24% Similarity=0.182 Sum_probs=17.5
Q ss_pred CCCCEEEccCCcccccCchhhhh-----cCCCCcEEeccCCcc
Q 045323 304 KNLRVLDVSNNKLQGHIPIEIGE-----VLPNLVVLNVATNAF 341 (740)
Q Consensus 304 ~~L~~L~l~~~~l~~~~~~~~~~-----~l~~L~~L~l~~n~~ 341 (740)
+.|+.|.+.+|.++......+.. ..|+|..|...+|..
T Consensus 242 ~~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~ 284 (388)
T COG5238 242 NLLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNER 284 (388)
T ss_pred chhhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhh
Confidence 34555666666554333222221 134555555555544
No 48
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.20 E-value=5.3e-07 Score=85.10 Aligned_cols=86 Identities=28% Similarity=0.276 Sum_probs=39.0
Q ss_pred cCCCCCEEECCCCCCCCc--cChhhhcCCCCCCEEEccCCcccccccccCcCCCCCCEEEcCCCCCCCCCCccccCCCCC
Q 045323 106 LMASLKYLSLSNSYLNGT--ILDQGLCELVYLQEVNIDRNNLSGSLPWCLANLTYLRLLDVSFNQLTENISSSPLMNLTY 183 (740)
Q Consensus 106 ~l~~L~~L~Ls~n~~~~~--~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~i~~~~l~~l~~ 183 (740)
.+++++.+||.+|.|+.- +.. .+.++|+|++|+++.|.+...+...-....+|++|-|.+..+.-.-....+..+|.
T Consensus 69 ~~~~v~elDL~~N~iSdWseI~~-ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~ 147 (418)
T KOG2982|consen 69 SVTDVKELDLTGNLISDWSEIGA-ILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPK 147 (418)
T ss_pred HhhhhhhhhcccchhccHHHHHH-HHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchh
Confidence 345555566666555421 111 24455555555555555542221111234455555555554432222223444555
Q ss_pred CCEEeccCC
Q 045323 184 IEELWLSNN 192 (740)
Q Consensus 184 L~~L~l~~n 192 (740)
+++|.++.|
T Consensus 148 vtelHmS~N 156 (418)
T KOG2982|consen 148 VTELHMSDN 156 (418)
T ss_pred hhhhhhccc
Confidence 555555554
No 49
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.08 E-value=2.5e-07 Score=76.89 Aligned_cols=110 Identities=21% Similarity=0.277 Sum_probs=69.2
Q ss_pred CCCccEEEcccCcccccChhhhhc-CCCCcEEECcCCcCcccCCccccCCCCCCEEeCCCCccCccCCcccccCCcCcee
Q 045323 616 LHSMSGLDLSCNKLIGEIPLQIGE-LSRIHTLNLSHNNLTGESPVTFSHMKQVESLDLSYNNLNGKIPPRLIELNALAVF 694 (740)
Q Consensus 616 ~~~L~~L~ls~n~l~~~~~~~l~~-l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L 694 (740)
...|+..++++|.+. ..|..|.. .+.++.|+|++|++. .+|+.+..++.|+.|+++.|++. ..|+-+..+.+|-.|
T Consensus 52 ~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~L 128 (177)
T KOG4579|consen 52 GYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDML 128 (177)
T ss_pred CceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHh
Confidence 345666777777776 45555533 457777777777777 45555777777777777777777 455555557777777
Q ss_pred eccCcccccCCCCcccCCCCcc-ccccccCCCCCCcC
Q 045323 695 SVAFNNLSGKTPDRVAQFGTFE-EDSYEGNPFLCGQP 730 (740)
Q Consensus 695 ~ls~N~l~~~~~~~~~~~~~l~-~l~l~~Np~~c~~~ 730 (740)
+..+|.+.-++-+ .-.+++. -+++..+||--+|+
T Consensus 129 ds~~na~~eid~d--l~~s~~~al~~lgnepl~~~~~ 163 (177)
T KOG4579|consen 129 DSPENARAEIDVD--LFYSSLPALIKLGNEPLGDETK 163 (177)
T ss_pred cCCCCccccCcHH--HhccccHHHHHhcCCcccccCc
Confidence 7777766533332 2334433 34467777765554
No 50
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.01 E-value=4.3e-07 Score=84.51 Aligned_cols=134 Identities=18% Similarity=0.108 Sum_probs=71.0
Q ss_pred hhcCCCCCCEEEcCCCCCCCCCChhHHhcCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCcccccCchhhh----
Q 045323 250 FLYHQHDLEYVDLSHLNLTREFPNWLLEKNKKLKRLSLVNISLFGPFPLPIHCHKNLRVLDVSNNKLQGHIPIEIG---- 325 (740)
Q Consensus 250 ~l~~l~~L~~L~L~~~~~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~L~~L~l~~~~l~~~~~~~~~---- 325 (740)
.+++.+.|++|.+++|++.......+. +.|.+| ..+ .....-|.|+.+++..|++. ..+....
T Consensus 115 ~is~~t~l~HL~l~NnGlGp~aG~rig---kal~~l--a~n-------KKaa~kp~Le~vicgrNRle-ngs~~~~a~~l 181 (388)
T COG5238 115 LISSSTDLVHLKLNNNGLGPIAGGRIG---KALFHL--AYN-------KKAADKPKLEVVICGRNRLE-NGSKELSAALL 181 (388)
T ss_pred HHhcCCCceeEEeecCCCCccchhHHH---HHHHHH--HHH-------hhhccCCCceEEEeccchhc-cCcHHHHHHHH
Confidence 345566788888888876532222111 111111 111 11233467888888888876 4443322
Q ss_pred hcCCCCcEEeccCCcccccCCCCccCcCccccCCccEEEccCCCCCCcC----cccccCCCCCCeeecCCCccee
Q 045323 326 EVLPNLVVLNVATNAFNGSIPSSFGNTWPWGCFYLEYLVLSNNSLQGQL----FSKEFNLTKLKRLNLDGNHFIG 396 (740)
Q Consensus 326 ~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~----~~~~~~l~~L~~L~l~~n~~~~ 396 (740)
..-.+|+.+.+..|.+.......+.-.....+.+|+.||+.+|.++... ...+...+.|+.|.+.+|-++.
T Consensus 182 ~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDClls~ 256 (388)
T COG5238 182 ESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLLSN 256 (388)
T ss_pred HhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhccccchhhcc
Confidence 2224778888888876533222222222223557777777777666322 2233445566777777765543
No 51
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=98.00 E-value=2e-07 Score=92.18 Aligned_cols=278 Identities=18% Similarity=0.086 Sum_probs=131.4
Q ss_pred CCCCCCcEEeCCCCCCcCcccchhc-ccCCCCCEEECCCCC-CCCccChhhhcCCCCCCEEEccCCc-cccc-ccccCcC
Q 045323 80 LNFKNLEYFNMDFCTAFSNSFLQMS-ELMASLKYLSLSNSY-LNGTILDQGLCELVYLQEVNIDRNN-LSGS-LPWCLAN 155 (740)
Q Consensus 80 ~~l~~L~~L~l~~~~~~~~~~~~~l-~~l~~L~~L~Ls~n~-~~~~~~~~~~~~l~~L~~L~L~~n~-l~~~-~~~~l~~ 155 (740)
.++++++.|.+.++..+++.....+ ..++.|++|++..|. ++..........+++|++|++++|. |++. +...+.+
T Consensus 161 ~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~gC~kL~~lNlSwc~qi~~~gv~~~~rG 240 (483)
T KOG4341|consen 161 SNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAEGCRKLKYLNLSWCPQISGNGVQALQRG 240 (483)
T ss_pred hhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccchhHHHHHHHHHHhhhhHHHhhhccCchhhcCcchHHhcc
Confidence 4566666666665555555444333 356777777776643 2211111123456777777777764 3321 1222345
Q ss_pred CCCCCEEEcCCCCCCCCCCcccc----CCCCCCCEEeccCCc-ccccCCccccccCCCccEEeCCCccccccccCCCCCC
Q 045323 156 LTYLRLLDVSFNQLTENISSSPL----MNLTYIEELWLSNNH-FQISISLEPFFNHSKLKFFDGDIYAEIETSHSSLTPK 230 (740)
Q Consensus 156 l~~L~~L~l~~n~l~~~i~~~~l----~~l~~L~~L~l~~n~-~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~ 230 (740)
+..++.+.+.+|.- .+...+ ..+.-+..+++..+. +++.-. +..-..+
T Consensus 241 ~~~l~~~~~kGC~e---~~le~l~~~~~~~~~i~~lnl~~c~~lTD~~~------------------------~~i~~~c 293 (483)
T KOG4341|consen 241 CKELEKLSLKGCLE---LELEALLKAAAYCLEILKLNLQHCNQLTDEDL------------------------WLIACGC 293 (483)
T ss_pred chhhhhhhhccccc---ccHHHHHHHhccChHhhccchhhhccccchHH------------------------HHHhhhh
Confidence 55666666565521 111111 223334444444442 111100 0011122
Q ss_pred ccccEEEecCCCCCCCC--ChhhcCCCCCCEEEcCCCC-CCCCCChhHHhcCCCCCEEEccCCccccc--CCCCCCCCCC
Q 045323 231 FQLTSISLFGHGDSGIF--PKFLYHQHDLEYVDLSHLN-LTREFPNWLLEKNKKLKRLSLVNISLFGP--FPLPIHCHKN 305 (740)
Q Consensus 231 ~~L~~L~l~~~~~~~~~--~~~l~~l~~L~~L~L~~~~-~~~~~~~~~~~~~~~L~~L~L~~~~~~~~--~~~~l~~~~~ 305 (740)
..|+.+..+++...+.. ..--.+.++|+.|.++.|+ +++..-..+..+.+.|+.+++.++..... +...-.+++.
T Consensus 294 ~~lq~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C~~ 373 (483)
T KOG4341|consen 294 HALQVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNCPR 373 (483)
T ss_pred hHhhhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCCch
Confidence 34555555555332211 1112345677777777765 33222233334566777777777654322 2222345677
Q ss_pred CCEEEccCCccc-ccC---chhhhhcCCCCcEEeccCCcccccCCCCccCcCccccCCccEEEccCCCC-CCcCcccc-c
Q 045323 306 LRVLDVSNNKLQ-GHI---PIEIGEVLPNLVVLNVATNAFNGSIPSSFGNTWPWGCFYLEYLVLSNNSL-QGQLFSKE-F 379 (740)
Q Consensus 306 L~~L~l~~~~l~-~~~---~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l-~~~~~~~~-~ 379 (740)
|+.+.++.|... +.. -......+..|..+.+++++.... ..+..+. .|++|+.+++-++.- +......+ .
T Consensus 374 lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d--~~Le~l~--~c~~Leri~l~~~q~vtk~~i~~~~~ 449 (483)
T KOG4341|consen 374 LRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITD--ATLEHLS--ICRNLERIELIDCQDVTKEAISRFAT 449 (483)
T ss_pred hccCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchH--HHHHHHh--hCcccceeeeechhhhhhhhhHHHHh
Confidence 777777776432 110 011112355677788888775421 1111111 255788877777632 22221222 2
Q ss_pred CCCCCCeee
Q 045323 380 NLTKLKRLN 388 (740)
Q Consensus 380 ~l~~L~~L~ 388 (740)
.+|+++...
T Consensus 450 ~lp~i~v~a 458 (483)
T KOG4341|consen 450 HLPNIKVHA 458 (483)
T ss_pred hCccceehh
Confidence 456555443
No 52
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.99 E-value=1.4e-06 Score=96.77 Aligned_cols=36 Identities=19% Similarity=0.398 Sum_probs=24.6
Q ss_pred CCCCCEEEcCCCCCCCCCChhHHhcCCCCCEEEccC
Q 045323 254 QHDLEYVDLSHLNLTREFPNWLLEKNKKLKRLSLVN 289 (740)
Q Consensus 254 l~~L~~L~L~~~~~~~~~~~~~~~~~~~L~~L~L~~ 289 (740)
+|+|+.||.+++.+...+.+.+...-++|+.+..-+
T Consensus 249 LpeLrfLDcSgTdi~~~~le~ll~sH~~L~~i~~~~ 284 (699)
T KOG3665|consen 249 LPELRFLDCSGTDINEEILEELLNSHPNLQQIAALD 284 (699)
T ss_pred CccccEEecCCcchhHHHHHHHHHhCccHhhhhhhh
Confidence 568888888888777666666555566666655443
No 53
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.97 E-value=2.7e-06 Score=80.49 Aligned_cols=105 Identities=22% Similarity=0.196 Sum_probs=60.7
Q ss_pred CCCEEEccCCcccccc-cccC-cCCCCCCEEEcCCCCCCC--CCCccccCCCCCCCEEeccCCcccccCCccccccCCCc
Q 045323 134 YLQEVNIDRNNLSGSL-PWCL-ANLTYLRLLDVSFNQLTE--NISSSPLMNLTYIEELWLSNNHFQISISLEPFFNHSKL 209 (740)
Q Consensus 134 ~L~~L~L~~n~l~~~~-~~~l-~~l~~L~~L~l~~n~l~~--~i~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L 209 (740)
-+.-|-+.++.|.... ...| ..++.++.+||.+|++++ +|.. .+.++|.|+.|+++.|.+...+.
T Consensus 46 a~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~-ile~lP~l~~LNls~N~L~s~I~---------- 114 (418)
T KOG2982|consen 46 ALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGA-ILEQLPALTTLNLSCNSLSSDIK---------- 114 (418)
T ss_pred chhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHH-HHhcCccceEeeccCCcCCCccc----------
Confidence 4455666666664321 1223 356788889999998875 2332 45778888889888888753221
Q ss_pred cEEeCCCccccccccCCC-CCCccccEEEecCCCCCC-CCChhhcCCCCCCEEEcCCC
Q 045323 210 KFFDGDIYAEIETSHSSL-TPKFQLTSISLFGHGDSG-IFPKFLYHQHDLEYVDLSHL 265 (740)
Q Consensus 210 ~~L~l~~~~~~~~~~~~~-~~~~~L~~L~l~~~~~~~-~~~~~l~~l~~L~~L~L~~~ 265 (740)
.+ .+..+|+.|-+.|..+.= ..-..+..+|.+++|+++.|
T Consensus 115 ----------------~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N 156 (418)
T KOG2982|consen 115 ----------------SLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDN 156 (418)
T ss_pred ----------------cCcccccceEEEEEcCCCCChhhhhhhhhcchhhhhhhhccc
Confidence 11 344466677666664321 12233445555555555555
No 54
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=97.95 E-value=2.9e-07 Score=91.07 Aligned_cols=38 Identities=29% Similarity=0.391 Sum_probs=21.4
Q ss_pred CCCCCCeeecCCCccee-cCCcCCCCCCCCceEeCCCcc
Q 045323 380 NLTKLKRLNLDGNHFIG-DIPKTLSNCSALQGLYISDNN 417 (740)
Q Consensus 380 ~l~~L~~L~l~~n~~~~-~~~~~l~~~~~L~~L~l~~n~ 417 (740)
....++.+.+++++.+. ..-+.+..+++|+.+++.+++
T Consensus 399 ~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~q 437 (483)
T KOG4341|consen 399 SLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDCQ 437 (483)
T ss_pred cccccceeeecCCCCchHHHHHHHhhCcccceeeeechh
Confidence 34556666666665432 233445566677776666653
No 55
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=97.95 E-value=6e-07 Score=74.74 Aligned_cols=105 Identities=21% Similarity=0.284 Sum_probs=65.7
Q ss_pred CccEEEcccCcccccChhh---hhcCCCCcEEECcCCcCcccCCccccCCCCCCEEeCCCCccCccCCcccccCCcCcee
Q 045323 618 SMSGLDLSCNKLIGEIPLQ---IGELSRIHTLNLSHNNLTGESPVTFSHMKQVESLDLSYNNLNGKIPPRLIELNALAVF 694 (740)
Q Consensus 618 ~L~~L~ls~n~l~~~~~~~---l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L 694 (740)
.+..+|+++|++- -+++. +.....|+..+|++|.+....+..-...+..+.|++++|.|+ .+|+.+..++.|+.+
T Consensus 28 E~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 28 ELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred Hhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 3455677777653 33333 344466666677777777333333333456777777777777 566667777777777
Q ss_pred eccCcccccCCCCcccCCCCccccccccCCC
Q 045323 695 SVAFNNLSGKTPDRVAQFGTFEEDSYEGNPF 725 (740)
Q Consensus 695 ~ls~N~l~~~~~~~~~~~~~l~~l~l~~Np~ 725 (740)
+++.|++... |+.+..+.++-+|+.-+|..
T Consensus 106 Nl~~N~l~~~-p~vi~~L~~l~~Lds~~na~ 135 (177)
T KOG4579|consen 106 NLRFNPLNAE-PRVIAPLIKLDMLDSPENAR 135 (177)
T ss_pred ccccCccccc-hHHHHHHHhHHHhcCCCCcc
Confidence 7777777755 44455566666666666543
No 56
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.86 E-value=7.8e-06 Score=55.08 Aligned_cols=36 Identities=33% Similarity=0.587 Sum_probs=15.7
Q ss_pred CCcEEECcCCcCcccCCccccCCCCCCEEeCCCCccC
Q 045323 642 RIHTLNLSHNNLTGESPVTFSHMKQVESLDLSYNNLN 678 (740)
Q Consensus 642 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~n~l~ 678 (740)
+|++|+|++|+++. +|..++.+++|+.|++++|+++
T Consensus 2 ~L~~L~l~~N~i~~-l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQITD-LPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-SS-HGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCcc-cCchHhCCCCCCEEEecCCCCC
Confidence 34455555555542 2223444455555555555444
No 57
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.75 E-value=6.1e-05 Score=67.62 Aligned_cols=106 Identities=20% Similarity=0.177 Sum_probs=63.1
Q ss_pred CCCCEEECCCCCCCCccChhhhcCCCCCCEEEccCCcccccccccCcCCCCCCEEEcCCCCCCCCCCccccCCCCCCCEE
Q 045323 108 ASLKYLSLSNSYLNGTILDQGLCELVYLQEVNIDRNNLSGSLPWCLANLTYLRLLDVSFNQLTENISSSPLMNLTYIEEL 187 (740)
Q Consensus 108 ~~L~~L~Ls~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~i~~~~l~~l~~L~~L 187 (740)
.+...+||++|.+. .++ .|..++.|.+|.+.+|.|+.+.|.--..+++|+.|.+.+|.+..-.....+..+++|++|
T Consensus 42 d~~d~iDLtdNdl~-~l~--~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~L 118 (233)
T KOG1644|consen 42 DQFDAIDLTDNDLR-KLD--NLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYL 118 (233)
T ss_pred cccceecccccchh-hcc--cCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCcccee
Confidence 45566777777764 343 467777777777777777766665555667777777777765431111235667777777
Q ss_pred eccCCcccccC--CccccccCCCccEEeCCC
Q 045323 188 WLSNNHFQISI--SLEPFFNHSKLKFFDGDI 216 (740)
Q Consensus 188 ~l~~n~~~~~~--~~~~~~~l~~L~~L~l~~ 216 (740)
.+-+|.++... ..-.+-.+++|+.||+..
T Consensus 119 tll~Npv~~k~~YR~yvl~klp~l~~LDF~k 149 (233)
T KOG1644|consen 119 TLLGNPVEHKKNYRLYVLYKLPSLRTLDFQK 149 (233)
T ss_pred eecCCchhcccCceeEEEEecCcceEeehhh
Confidence 77777654211 111233455556655544
No 58
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.75 E-value=3.8e-05 Score=51.76 Aligned_cols=36 Identities=31% Similarity=0.445 Sum_probs=16.6
Q ss_pred CCCEEECCCCCCCCccChhhhcCCCCCCEEEccCCccc
Q 045323 109 SLKYLSLSNSYLNGTILDQGLCELVYLQEVNIDRNNLS 146 (740)
Q Consensus 109 ~L~~L~Ls~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~ 146 (740)
+|++|++++|+|+ .++. .++++++|++|++++|+++
T Consensus 2 ~L~~L~l~~N~i~-~l~~-~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPP-ELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGG-HGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCc-hHhCCCCCCEEEecCCCCC
Confidence 4455555555554 3442 3455555555555555444
No 59
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.75 E-value=9.3e-06 Score=90.35 Aligned_cols=134 Identities=20% Similarity=0.222 Sum_probs=74.6
Q ss_pred CCCCCcEEeCCCCCCcCcccchhcc-cCCCCCEEECCCCCCCCccChhhhcCCCCCCEEEccCCcccccccccCcCCCCC
Q 045323 81 NFKNLEYFNMDFCTAFSNSFLQMSE-LMASLKYLSLSNSYLNGTILDQGLCELVYLQEVNIDRNNLSGSLPWCLANLTYL 159 (740)
Q Consensus 81 ~l~~L~~L~l~~~~~~~~~~~~~l~-~l~~L~~L~Ls~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 159 (740)
.-.+|++|++++...+...++..++ .+|+|++|.+++-.+...--.....++++|..||+|+++++.. ..++++++|
T Consensus 120 sr~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknL 197 (699)
T KOG3665|consen 120 SRQNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNL 197 (699)
T ss_pred HHHhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccH
Confidence 3345666666655555555555554 4677777777665543211011345667777777777777643 556677777
Q ss_pred CEEEcCCCCCCCCCCccccCCCCCCCEEeccCCcccccC--C---ccccccCCCccEEeCCC
Q 045323 160 RLLDVSFNQLTENISSSPLMNLTYIEELWLSNNHFQISI--S---LEPFFNHSKLKFFDGDI 216 (740)
Q Consensus 160 ~~L~l~~n~l~~~i~~~~l~~l~~L~~L~l~~n~~~~~~--~---~~~~~~l~~L~~L~l~~ 216 (740)
++|.+.+=.+...-.-..+.++++|+.||+|........ . .+.-..+++|++||.++
T Consensus 198 q~L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSg 259 (699)
T KOG3665|consen 198 QVLSMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSG 259 (699)
T ss_pred HHHhccCCCCCchhhHHHHhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCC
Confidence 777766655543111124566777777777765433111 0 01112366777777765
No 60
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.68 E-value=0.00015 Score=74.29 Aligned_cols=75 Identities=15% Similarity=0.262 Sum_probs=49.1
Q ss_pred hcCCCCCCEEECCCCcCcccCCCCCCCCcccEEEcCCCcccCcCccccCCCcCCCCCCcccCCCCCCcEEecccC-cccc
Q 045323 450 FCQLRHLEILDLSRNNISGSLPSCSSPFNIRRVHLSKNMLQGPLLGDLSYNRLNSNIPDWMNRLPQLRYLILANN-GLEG 528 (740)
Q Consensus 450 l~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~ls~n-~l~~ 528 (740)
+..+..++.|++++|.++ .+| .-+.+|+.|.+++|.-- ..+|..+ .++|+.|++++| .+.
T Consensus 48 ~~~~~~l~~L~Is~c~L~-sLP--~LP~sLtsL~Lsnc~nL-------------tsLP~~L--P~nLe~L~Ls~Cs~L~- 108 (426)
T PRK15386 48 IEEARASGRLYIKDCDIE-SLP--VLPNELTEITIENCNNL-------------TTLPGSI--PEGLEKLTVCHCPEIS- 108 (426)
T ss_pred HHHhcCCCEEEeCCCCCc-ccC--CCCCCCcEEEccCCCCc-------------ccCCchh--hhhhhheEccCccccc-
Confidence 455789999999999777 445 24668999999876421 1233333 257888888887 443
Q ss_pred cCCccccCCCCCCEEEccCCc
Q 045323 529 EMPLQLCWLNKLQLVDLSHNN 549 (740)
Q Consensus 529 ~~~~~~~~l~~L~~L~l~~n~ 549 (740)
.+| ++|+.|++.++.
T Consensus 109 sLP------~sLe~L~L~~n~ 123 (426)
T PRK15386 109 GLP------ESVRSLEIKGSA 123 (426)
T ss_pred ccc------cccceEEeCCCC
Confidence 233 467777776654
No 61
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.67 E-value=5.1e-05 Score=68.11 Aligned_cols=83 Identities=20% Similarity=0.269 Sum_probs=45.7
Q ss_pred CCCcEEECcCCcCcccCCccccCCCCCCEEeCCCCccCccCCcccccCCcCceeeccCcccccCCC-CcccCCCCccccc
Q 045323 641 SRIHTLNLSHNNLTGESPVTFSHMKQVESLDLSYNNLNGKIPPRLIELNALAVFSVAFNNLSGKTP-DRVAQFGTFEEDS 719 (740)
Q Consensus 641 ~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~-~~~~~~~~l~~l~ 719 (740)
.+...+||+.|++. -...|..++.|.+|.|.+|+|+.+.|..-..+++|+.|.+.+|.+...-. +..+.++.|++|.
T Consensus 42 d~~d~iDLtdNdl~--~l~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Lt 119 (233)
T KOG1644|consen 42 DQFDAIDLTDNDLR--KLDNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLT 119 (233)
T ss_pred cccceecccccchh--hcccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceee
Confidence 45555666666665 22234556666666666666665444444445566666666665532211 1134556666666
Q ss_pred cccCCC
Q 045323 720 YEGNPF 725 (740)
Q Consensus 720 l~~Np~ 725 (740)
+-|||.
T Consensus 120 ll~Npv 125 (233)
T KOG1644|consen 120 LLGNPV 125 (233)
T ss_pred ecCCch
Confidence 666665
No 62
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.54 E-value=0.00027 Score=72.39 Aligned_cols=62 Identities=13% Similarity=0.165 Sum_probs=35.6
Q ss_pred CCcccEEEcCCCcccCcCccccCCCcCCCCCCcccCCCCCCcEEecccCcccccCCccccCCCCCCEEEccCCcCcCCCC
Q 045323 476 PFNIRRVHLSKNMLQGPLLGDLSYNRLNSNIPDWMNRLPQLRYLILANNGLEGEMPLQLCWLNKLQLVDLSHNNLSGQIP 555 (740)
Q Consensus 476 ~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p 555 (740)
+..++.|++++|.++ .+|. --++|++|.+++|.-....|..+ .++|+.|++++|.-...+|
T Consensus 51 ~~~l~~L~Is~c~L~--------------sLP~---LP~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~Cs~L~sLP 111 (426)
T PRK15386 51 ARASGRLYIKDCDIE--------------SLPV---LPNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHCPEISGLP 111 (426)
T ss_pred hcCCCEEEeCCCCCc--------------ccCC---CCCCCcEEEccCCCCcccCCchh--hhhhhheEccCcccccccc
Confidence 567777777777665 3341 12357778877653323445433 2577788887773222344
Q ss_pred c
Q 045323 556 H 556 (740)
Q Consensus 556 ~ 556 (740)
.
T Consensus 112 ~ 112 (426)
T PRK15386 112 E 112 (426)
T ss_pred c
Confidence 3
No 63
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.11 E-value=0.00019 Score=67.51 Aligned_cols=93 Identities=24% Similarity=0.337 Sum_probs=64.7
Q ss_pred cccchhcccCCCCCEEECCCCCCCCccChhhhcCCCCCCEEEccCC--cccccccccCcCCCCCCEEEcCCCCCCC--CC
Q 045323 98 NSFLQMSELMASLKYLSLSNSYLNGTILDQGLCELVYLQEVNIDRN--NLSGSLPWCLANLTYLRLLDVSFNQLTE--NI 173 (740)
Q Consensus 98 ~~~~~~l~~l~~L~~L~Ls~n~~~~~~~~~~~~~l~~L~~L~L~~n--~l~~~~~~~l~~l~~L~~L~l~~n~l~~--~i 173 (740)
+.+......+..|+.|++.+..++ ++. .|-.+++|++|.++.| .+.+.++.....+++|++|++++|++.. .+
T Consensus 33 g~~~gl~d~~~~le~ls~~n~glt-t~~--~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl 109 (260)
T KOG2739|consen 33 GKLGGLTDEFVELELLSVINVGLT-TLT--NFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTL 109 (260)
T ss_pred CCcccccccccchhhhhhhcccee-ecc--cCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCcccccccc
Confidence 334444445667777777777665 333 5778888999999998 6666666666677999999999998753 22
Q ss_pred CccccCCCCCCCEEeccCCccc
Q 045323 174 SSSPLMNLTYIEELWLSNNHFQ 195 (740)
Q Consensus 174 ~~~~l~~l~~L~~L~l~~n~~~ 195 (740)
. .+..+.+|..|++.+|..+
T Consensus 110 ~--pl~~l~nL~~Ldl~n~~~~ 129 (260)
T KOG2739|consen 110 R--PLKELENLKSLDLFNCSVT 129 (260)
T ss_pred c--hhhhhcchhhhhcccCCcc
Confidence 2 3566777888888887654
No 64
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=96.97 E-value=0.0028 Score=55.18 Aligned_cols=76 Identities=21% Similarity=0.264 Sum_probs=24.3
Q ss_pred cccCCCCCCeeecCCCcceecCCcCCCCCCCCceEeCCCcccccCCCcCCCCCCCCCEEeCCCCcCcCCchhhhcCCCCC
Q 045323 377 KEFNLTKLKRLNLDGNHFIGDIPKTLSNCSALQGLYISDNNISGNIPTRLGNLSFLDAIMMPNNRLEGPIPSAFCQLRHL 456 (740)
Q Consensus 377 ~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L 456 (740)
.|..++.++.+.+.+ .+.......|..+++++.+.+..+ +.......|.++ .|+.+.+.. .+..+....|.++++|
T Consensus 53 ~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~~l 128 (129)
T PF13306_consen 53 AFSNCKSLESITFPN-NLKSIGDNAFSNCTNLKNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEENAFKNCTKL 128 (129)
T ss_dssp TTTT-TT-EEEEETS-TT-EE-TTTTTT-TTECEEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS----GGG-----
T ss_pred eeecccccccccccc-cccccccccccccccccccccCcc-ccEEchhhhcCC-CceEEEECC-CccEECCccccccccC
Confidence 344444455555543 222233334444555555555433 322333344444 555555543 2232344445555444
No 65
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=96.95 E-value=0.0025 Score=55.55 Aligned_cols=124 Identities=10% Similarity=0.158 Sum_probs=55.1
Q ss_pred cccCCCCCCcEEecccCcccccCCccccCCCCCCEEEccCCcCcCCCCccccccccccccCCCCccCCCchhhccchhhH
Q 045323 508 DWMNRLPQLRYLILANNGLEGEMPLQLCWLNKLQLVDLSHNNLSGQIPHCLYNISFNYREDNHDLFDQDPQILYQLPQLQ 587 (740)
Q Consensus 508 ~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~L~ 587 (740)
..|..+++|+.+.+.. .+.......|..+++|+.+.+.++ +......
T Consensus 6 ~~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~------------------------------- 52 (129)
T PF13306_consen 6 NAFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDN------------------------------- 52 (129)
T ss_dssp TTTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TT-------------------------------
T ss_pred HHHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-cccccee-------------------------------
Confidence 4466677788777764 455455566777777887777664 3211111
Q ss_pred HhhhcccccceeeeeeeccccceeecccCCCccEEEcccCcccccChhhhhcCCCCcEEECcCCcCcccCCccccCCCCC
Q 045323 588 ILYTNYHNHKYLTNFTTKQRLYTYEVQPLHSMSGLDLSCNKLIGEIPLQIGELSRIHTLNLSHNNLTGESPVTFSHMKQV 667 (740)
Q Consensus 588 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L 667 (740)
.+..+++++.+.+.+ .+.......|..+++|+.+++..+ ++......|..+ .|
T Consensus 53 ------------------------~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~l~~i~~~~~-~~~i~~~~f~~~-~l 105 (129)
T PF13306_consen 53 ------------------------AFSNCKSLESITFPN-NLKSIGDNAFSNCTNLKNIDIPSN-ITEIGSSSFSNC-NL 105 (129)
T ss_dssp ------------------------TTTT-TT-EEEEETS-TT-EE-TTTTTT-TTECEEEETTT--BEEHTTTTTT--T-
T ss_pred ------------------------eeecccccccccccc-cccccccccccccccccccccCcc-ccEEchhhhcCC-Cc
Confidence 122233566666654 333244445666777777777665 555566666666 77
Q ss_pred CEEeCCCCccCccCCcccccCCcCc
Q 045323 668 ESLDLSYNNLNGKIPPRLIELNALA 692 (740)
Q Consensus 668 ~~L~Ls~n~l~~~~~~~l~~l~~L~ 692 (740)
+.+.+.. .+.......|.++++|+
T Consensus 106 ~~i~~~~-~~~~i~~~~F~~~~~l~ 129 (129)
T PF13306_consen 106 KEINIPS-NITKIEENAFKNCTKLK 129 (129)
T ss_dssp -EEE-TT-B-SS----GGG------
T ss_pred eEEEECC-CccEECCccccccccCC
Confidence 7777765 44434455666665553
No 66
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=96.47 E-value=0.00041 Score=76.38 Aligned_cols=64 Identities=22% Similarity=0.097 Sum_probs=31.1
Q ss_pred cCCCCCCEEEccCCc-ccccccccCcC-CCCCCEEEcCCCC-CCCCCCccccCCCCCCCEEeccCCc
Q 045323 130 CELVYLQEVNIDRNN-LSGSLPWCLAN-LTYLRLLDVSFNQ-LTENISSSPLMNLTYIEELWLSNNH 193 (740)
Q Consensus 130 ~~l~~L~~L~L~~n~-l~~~~~~~l~~-l~~L~~L~l~~n~-l~~~i~~~~l~~l~~L~~L~l~~n~ 193 (740)
..+++|+.|+++++. +++..-..++. |++|++|.+.++. +++..-......++.|++|+++.+.
T Consensus 240 ~~~~~L~~l~l~~~~~isd~~l~~l~~~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~ 306 (482)
T KOG1947|consen 240 SICRKLKSLDLSGCGLVTDIGLSALASRCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCH 306 (482)
T ss_pred hhcCCcCccchhhhhccCchhHHHHHhhCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCc
Confidence 344556666666655 44333333332 5566666655554 3332222123345556666666554
No 67
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=96.25 E-value=0.0048 Score=41.40 Aligned_cols=28 Identities=32% Similarity=0.732 Sum_probs=21.4
Q ss_pred HHHHHHHHHHhhc-----------CC-C--CCCccccceEec
Q 045323 10 EQEGYALLKLKHD-----------FF-N--NHCCQWACVECN 37 (740)
Q Consensus 10 ~~~~~~~~~~~~~-----------~~-~--~~~c~~~~~~c~ 37 (740)
++|..||++||+. |. . .+||.|.||.|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 5789999999988 77 3 699999999995
No 68
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.23 E-value=0.0002 Score=67.56 Aligned_cols=80 Identities=33% Similarity=0.413 Sum_probs=42.2
Q ss_pred CCCCCCEEECCCCcCcccCCCCCCCCcccEEEcCCCcccCcCccccCCCcCCCCCCcccCCCCCCcEEecccCcccccCC
Q 045323 452 QLRHLEILDLSRNNISGSLPSCSSPFNIRRVHLSKNMLQGPLLGDLSYNRLNSNIPDWMNRLPQLRYLILANNGLEGEMP 531 (740)
Q Consensus 452 ~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~ 531 (740)
.++.|++|.|+-|+|+ .+..+..|..|++|++..|.|.+. .--..+.++|+|+.|+|..|.-.+..+
T Consensus 39 kMp~lEVLsLSvNkIs-sL~pl~rCtrLkElYLRkN~I~sl------------dEL~YLknlpsLr~LWL~ENPCc~~ag 105 (388)
T KOG2123|consen 39 KMPLLEVLSLSVNKIS-SLAPLQRCTRLKELYLRKNCIESL------------DELEYLKNLPSLRTLWLDENPCCGEAG 105 (388)
T ss_pred hcccceeEEeeccccc-cchhHHHHHHHHHHHHHhcccccH------------HHHHHHhcCchhhhHhhccCCcccccc
Confidence 4455555555555554 334444455555555555554321 011335667777777777776554332
Q ss_pred c-----cccCCCCCCEEE
Q 045323 532 L-----QLCWLNKLQLVD 544 (740)
Q Consensus 532 ~-----~~~~l~~L~~L~ 544 (740)
. .+..+|+|+.||
T Consensus 106 ~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 106 QNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred hhHHHHHHHHcccchhcc
Confidence 1 244567777665
No 69
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=96.09 E-value=0.00069 Score=74.59 Aligned_cols=189 Identities=19% Similarity=0.105 Sum_probs=85.1
Q ss_pred CCCCCEEEcCCCCCCCC-CChhHHhcCCCCCEEEccCC-cccccC----CCCCCCCCCCCEEEccCCc-ccccCchhhhh
Q 045323 254 QHDLEYVDLSHLNLTRE-FPNWLLEKNKKLKRLSLVNI-SLFGPF----PLPIHCHKNLRVLDVSNNK-LQGHIPIEIGE 326 (740)
Q Consensus 254 l~~L~~L~L~~~~~~~~-~~~~~~~~~~~L~~L~L~~~-~~~~~~----~~~l~~~~~L~~L~l~~~~-l~~~~~~~~~~ 326 (740)
++.|+.+.+.++.-... .-..+...++.|++|+++++ ...... ......+++|+.|+++.+. +++..-..+..
T Consensus 187 ~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l~~ 266 (482)
T KOG1947|consen 187 CPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSALAS 266 (482)
T ss_pred CchhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHHHh
Confidence 45666666666532212 11223345666777776652 111111 1123344666677776665 55444444444
Q ss_pred cCCCCcEEeccCCc-ccccCCCCccCcCccccCCccEEEccCCCCC-Cc-CcccccCCCCCCeeecCCCcceecCCcCCC
Q 045323 327 VLPNLVVLNVATNA-FNGSIPSSFGNTWPWGCFYLEYLVLSNNSLQ-GQ-LFSKEFNLTKLKRLNLDGNHFIGDIPKTLS 403 (740)
Q Consensus 327 ~l~~L~~L~l~~n~-~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~-~~-~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~ 403 (740)
.+++|+.|.+.+|. +++..-..+.. .|+.|++|+++++... +. .......+++++.+.+....
T Consensus 267 ~c~~L~~L~l~~c~~lt~~gl~~i~~----~~~~L~~L~l~~c~~~~d~~l~~~~~~c~~l~~l~~~~~~---------- 332 (482)
T KOG1947|consen 267 RCPNLETLSLSNCSNLTDEGLVSIAE----RCPSLRELDLSGCHGLTDSGLEALLKNCPNLRELKLLSLN---------- 332 (482)
T ss_pred hCCCcceEccCCCCccchhHHHHHHH----hcCcccEEeeecCccchHHHHHHHHHhCcchhhhhhhhcC----------
Confidence 46677777666665 33322222221 2445666666665432 11 11112234444444332221
Q ss_pred CCCCCceEeCCCcccc---cCCCcCCCCCCCCCEEeCCCCcCcCCc-hhhhcCCCCC
Q 045323 404 NCSALQGLYISDNNIS---GNIPTRLGNLSFLDAIMMPNNRLEGPI-PSAFCQLRHL 456 (740)
Q Consensus 404 ~~~~L~~L~l~~n~i~---~~~~~~~~~l~~L~~L~l~~n~~~~~~-~~~l~~l~~L 456 (740)
.++.++.+.+...... .........+++++.+.+..+...... ...+.+|+.|
T Consensus 333 ~c~~l~~~~l~~~~~~~~d~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~l~gc~~l 389 (482)
T KOG1947|consen 333 GCPSLTDLSLSGLLTLTSDDLAELILRSCPKLTDLSLSYCGISDLGLELSLRGCPNL 389 (482)
T ss_pred CCccHHHHHHHHhhccCchhHhHHHHhcCCCcchhhhhhhhccCcchHHHhcCCccc
Confidence 1233444443333221 111223445666666666665533222 2344455555
No 70
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=96.04 E-value=0.004 Score=58.85 Aligned_cols=105 Identities=16% Similarity=0.138 Sum_probs=73.3
Q ss_pred CCCccEEEcccCcccccChhhhhcCCCCcEEECcCC--cCcccCCccccCCCCCCEEeCCCCccCcc-CCcccccCCcCc
Q 045323 616 LHSMSGLDLSCNKLIGEIPLQIGELSRIHTLNLSHN--NLTGESPVTFSHMKQVESLDLSYNNLNGK-IPPRLIELNALA 692 (740)
Q Consensus 616 ~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~L~~N--~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~-~~~~l~~l~~L~ 692 (740)
+..|+.+.+.+..++ --..|..+++|++|.++.| ++.+-.+.....+++|+.|++++|+|... --+.+..+.+|.
T Consensus 42 ~~~le~ls~~n~glt--t~~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl~pl~~l~nL~ 119 (260)
T KOG2739|consen 42 FVELELLSVINVGLT--TLTNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTLRPLKELENLK 119 (260)
T ss_pred ccchhhhhhhcccee--ecccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccccccccchhhhhcchh
Confidence 456777777777775 2235677899999999999 55555555556679999999999998731 112345677888
Q ss_pred eeeccCcccccCCC---CcccCCCCcccccccc
Q 045323 693 VFSVAFNNLSGKTP---DRVAQFGTFEEDSYEG 722 (740)
Q Consensus 693 ~L~ls~N~l~~~~~---~~~~~~~~l~~l~l~~ 722 (740)
.|++.+|.-+.... ..|..+++|++++-..
T Consensus 120 ~Ldl~n~~~~~l~dyre~vf~ll~~L~~LD~~d 152 (260)
T KOG2739|consen 120 SLDLFNCSVTNLDDYREKVFLLLPSLKYLDGCD 152 (260)
T ss_pred hhhcccCCccccccHHHHHHHHhhhhccccccc
Confidence 99999997766433 3356668888877544
No 71
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.92 E-value=0.00025 Score=66.88 Aligned_cols=80 Identities=25% Similarity=0.257 Sum_probs=33.7
Q ss_pred CCCEEECCCCCCCCccChhhhcCCCCCCEEEccCCcccccccccCcCCCCCCEEEcCCCCCCCCCCccccCCCCCCCEEe
Q 045323 109 SLKYLSLSNSYLNGTILDQGLCELVYLQEVNIDRNNLSGSLPWCLANLTYLRLLDVSFNQLTENISSSPLMNLTYIEELW 188 (740)
Q Consensus 109 ~L~~L~Ls~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~i~~~~l~~l~~L~~L~ 188 (740)
+.+.|++-+|.++ .|. ...+++.|+.|.|+-|+|+...| +..|++|++|.|+.|.|.+.-...-+.++++|+.|.
T Consensus 20 ~vkKLNcwg~~L~-DIs--ic~kMp~lEVLsLSvNkIssL~p--l~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~LW 94 (388)
T KOG2123|consen 20 NVKKLNCWGCGLD-DIS--ICEKMPLLEVLSLSVNKISSLAP--LQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTLW 94 (388)
T ss_pred HhhhhcccCCCcc-HHH--HHHhcccceeEEeeccccccchh--HHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhHh
Confidence 3444444444443 222 23444445555555444443222 444445555555544443311111234444444444
Q ss_pred ccCCc
Q 045323 189 LSNNH 193 (740)
Q Consensus 189 l~~n~ 193 (740)
|..|.
T Consensus 95 L~ENP 99 (388)
T KOG2123|consen 95 LDENP 99 (388)
T ss_pred hccCC
Confidence 44444
No 72
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=94.18 E-value=0.016 Score=32.21 Aligned_cols=7 Identities=86% Similarity=0.880 Sum_probs=2.5
Q ss_pred EeCCCCc
Q 045323 670 LDLSYNN 676 (740)
Q Consensus 670 L~Ls~n~ 676 (740)
|||++|+
T Consensus 5 Ldls~n~ 11 (22)
T PF00560_consen 5 LDLSGNN 11 (22)
T ss_dssp EEETSSE
T ss_pred EECCCCc
Confidence 3333333
No 73
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=94.07 E-value=0.025 Score=31.42 Aligned_cols=12 Identities=33% Similarity=0.623 Sum_probs=5.0
Q ss_pred CCEEEccCCccc
Q 045323 135 LQEVNIDRNNLS 146 (740)
Q Consensus 135 L~~L~L~~n~l~ 146 (740)
|++|++++|+++
T Consensus 2 L~~Ldls~n~l~ 13 (22)
T PF00560_consen 2 LEYLDLSGNNLT 13 (22)
T ss_dssp ESEEEETSSEES
T ss_pred ccEEECCCCcCE
Confidence 344444444444
No 74
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.90 E-value=0.019 Score=52.15 Aligned_cols=83 Identities=17% Similarity=0.140 Sum_probs=62.9
Q ss_pred CccEEEcccCcccccChhhhhcCCCCcEEECcCCcC-cccCCcccc-CCCCCCEEeCCCC-ccCccCCcccccCCcCcee
Q 045323 618 SMSGLDLSCNKLIGEIPLQIGELSRIHTLNLSHNNL-TGESPVTFS-HMKQVESLDLSYN-NLNGKIPPRLIELNALAVF 694 (740)
Q Consensus 618 ~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~L~~N~l-~~~~~~~l~-~l~~L~~L~Ls~n-~l~~~~~~~l~~l~~L~~L 694 (740)
.++.+|-++..|..+..+.+.+++.++.|.+.++.- .+.--+.++ ..++|+.|++++| +|+...-.++..+++|+.|
T Consensus 102 ~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~GL~~L~~lknLr~L 181 (221)
T KOG3864|consen 102 KIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGGLACLLKLKNLRRL 181 (221)
T ss_pred eEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhHHHHHHHhhhhHHH
Confidence 578899999999988888999999999999998852 221112222 3478999999988 6776666778888889888
Q ss_pred eccCcc
Q 045323 695 SVAFNN 700 (740)
Q Consensus 695 ~ls~N~ 700 (740)
.+.+=+
T Consensus 182 ~l~~l~ 187 (221)
T KOG3864|consen 182 HLYDLP 187 (221)
T ss_pred HhcCch
Confidence 877543
No 75
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=92.28 E-value=0.0012 Score=70.52 Aligned_cols=61 Identities=31% Similarity=0.410 Sum_probs=35.8
Q ss_pred ccEEEcccCccccc----ChhhhhcC-CCCcEEECcCCcCcccC----CccccCCCCCCEEeCCCCccCc
Q 045323 619 MSGLDLSCNKLIGE----IPLQIGEL-SRIHTLNLSHNNLTGES----PVTFSHMKQVESLDLSYNNLNG 679 (740)
Q Consensus 619 L~~L~ls~n~l~~~----~~~~l~~l-~~L~~L~L~~N~l~~~~----~~~l~~l~~L~~L~Ls~n~l~~ 679 (740)
+..+++.+|.+.+. ....+..+ ..+++++++.|.+++.. ...+..++.++++.+++|.+..
T Consensus 235 ~~el~l~~n~l~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~~ 304 (478)
T KOG4308|consen 235 LRELDLASNKLGDVGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLTD 304 (478)
T ss_pred hHHHHHHhcCcchHHHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCcccc
Confidence 45577777776533 12233334 55677777777776532 3444555667777777777663
No 76
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=91.23 E-value=0.11 Score=26.66 Aligned_cols=11 Identities=55% Similarity=0.767 Sum_probs=3.2
Q ss_pred CCEEeCCCCcc
Q 045323 667 VESLDLSYNNL 677 (740)
Q Consensus 667 L~~L~Ls~n~l 677 (740)
|+.|++++|++
T Consensus 3 L~~L~l~~n~L 13 (17)
T PF13504_consen 3 LRTLDLSNNRL 13 (17)
T ss_dssp -SEEEETSS--
T ss_pred cCEEECCCCCC
Confidence 33344444433
No 77
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=90.10 E-value=0.18 Score=29.34 Aligned_cols=20 Identities=25% Similarity=0.315 Sum_probs=10.4
Q ss_pred CcCceeeccCcccccCCCCc
Q 045323 689 NALAVFSVAFNNLSGKTPDR 708 (740)
Q Consensus 689 ~~L~~L~ls~N~l~~~~~~~ 708 (740)
++|+.|++++|++..+++..
T Consensus 2 ~~L~~L~L~~N~l~~lp~~~ 21 (26)
T smart00369 2 PNLRELDLSNNQLSSLPPGA 21 (26)
T ss_pred CCCCEEECCCCcCCcCCHHH
Confidence 34555555555555554443
No 78
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=90.10 E-value=0.18 Score=29.34 Aligned_cols=20 Identities=25% Similarity=0.315 Sum_probs=10.4
Q ss_pred CcCceeeccCcccccCCCCc
Q 045323 689 NALAVFSVAFNNLSGKTPDR 708 (740)
Q Consensus 689 ~~L~~L~ls~N~l~~~~~~~ 708 (740)
++|+.|++++|++..+++..
T Consensus 2 ~~L~~L~L~~N~l~~lp~~~ 21 (26)
T smart00370 2 PNLRELDLSNNQLSSLPPGA 21 (26)
T ss_pred CCCCEEECCCCcCCcCCHHH
Confidence 34555555555555554443
No 79
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=89.37 E-value=0.0033 Score=67.28 Aligned_cols=36 Identities=22% Similarity=0.137 Sum_probs=17.6
Q ss_pred CCEEEcCCCCCCCCCChhHH---hcCCCCCEEEccCCcc
Q 045323 257 LEYVDLSHLNLTREFPNWLL---EKNKKLKRLSLVNISL 292 (740)
Q Consensus 257 L~~L~L~~~~~~~~~~~~~~---~~~~~L~~L~L~~~~~ 292 (740)
+..+.+.+|.+.......+. ...+.|+.|++++|.+
T Consensus 89 l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l 127 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGNNL 127 (478)
T ss_pred HHHhhhhhCccccchHHHHHHHhcccccHhHhhcccCCC
Confidence 66667777776654333322 1233444444444443
No 80
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=89.31 E-value=0.29 Score=28.44 Aligned_cols=13 Identities=46% Similarity=0.667 Sum_probs=6.0
Q ss_pred CCCEEeCCCCccC
Q 045323 666 QVESLDLSYNNLN 678 (740)
Q Consensus 666 ~L~~L~Ls~n~l~ 678 (740)
+|+.|+|++|+|+
T Consensus 3 ~L~~L~L~~N~l~ 15 (26)
T smart00370 3 NLRELDLSNNQLS 15 (26)
T ss_pred CCCEEECCCCcCC
Confidence 3444444444444
No 81
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=89.31 E-value=0.29 Score=28.44 Aligned_cols=13 Identities=46% Similarity=0.667 Sum_probs=6.0
Q ss_pred CCCEEeCCCCccC
Q 045323 666 QVESLDLSYNNLN 678 (740)
Q Consensus 666 ~L~~L~Ls~n~l~ 678 (740)
+|+.|+|++|+|+
T Consensus 3 ~L~~L~L~~N~l~ 15 (26)
T smart00369 3 NLRELDLSNNQLS 15 (26)
T ss_pred CCCEEECCCCcCC
Confidence 3444444444444
No 82
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=88.26 E-value=0.023 Score=52.57 Aligned_cols=85 Identities=22% Similarity=0.257 Sum_probs=39.8
Q ss_pred hhcCCCCcEEECcCCcCcccCCccccCCCCCCEEeCCCCccCccCCcccccCCcCceeeccCcccccCCCCcccCCCCcc
Q 045323 637 IGELSRIHTLNLSHNNLTGESPVTFSHMKQVESLDLSYNNLNGKIPPRLIELNALAVFSVAFNNLSGKTPDRVAQFGTFE 716 (740)
Q Consensus 637 l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~N~l~~~~~~~~~~~~~l~ 716 (740)
+......+.||++.|++.. .-..|+-++.|..||++.|.+. ..|..+..+..+..+++..|..+.. |..++..+.++
T Consensus 38 i~~~kr~tvld~~s~r~vn-~~~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~~~-p~s~~k~~~~k 114 (326)
T KOG0473|consen 38 IASFKRVTVLDLSSNRLVN-LGKNFSILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHSQQ-PKSQKKEPHPK 114 (326)
T ss_pred hhccceeeeehhhhhHHHh-hccchHHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchhhC-CccccccCCcc
Confidence 3334444555555554442 2222334444555555555554 4444444444455555555544433 33345555555
Q ss_pred ccccccCC
Q 045323 717 EDSYEGNP 724 (740)
Q Consensus 717 ~l~l~~Np 724 (740)
++++-+||
T Consensus 115 ~~e~k~~~ 122 (326)
T KOG0473|consen 115 KNEQKKTE 122 (326)
T ss_pred hhhhccCc
Confidence 55555554
No 83
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=85.24 E-value=0.027 Score=52.14 Aligned_cols=85 Identities=19% Similarity=0.203 Sum_probs=72.7
Q ss_pred cCCCccEEEcccCcccccChhhhhcCCCCcEEECcCCcCcccCCccccCCCCCCEEeCCCCccCccCCcccccCCcCcee
Q 045323 615 PLHSMSGLDLSCNKLIGEIPLQIGELSRIHTLNLSHNNLTGESPVTFSHMKQVESLDLSYNNLNGKIPPRLIELNALAVF 694 (740)
Q Consensus 615 ~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L 694 (740)
.+...+.||++.|++. ..-..|.-++.|..|+++.|++. -.|..++....+..+++.+|..+ ..|-++...++++++
T Consensus 40 ~~kr~tvld~~s~r~v-n~~~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~~~k~~ 116 (326)
T KOG0473|consen 40 SFKRVTVLDLSSNRLV-NLGKNFSILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPKSQKKEPHPKKN 116 (326)
T ss_pred ccceeeeehhhhhHHH-hhccchHHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCccccccCCcchh
Confidence 4457788999999986 55666888899999999999998 77888888888999999999998 678889999999999
Q ss_pred eccCcccc
Q 045323 695 SVAFNNLS 702 (740)
Q Consensus 695 ~ls~N~l~ 702 (740)
++-.|++.
T Consensus 117 e~k~~~~~ 124 (326)
T KOG0473|consen 117 EQKKTEFF 124 (326)
T ss_pred hhccCcch
Confidence 99999864
No 84
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=83.33 E-value=0.46 Score=26.94 Aligned_cols=19 Identities=32% Similarity=0.347 Sum_probs=8.9
Q ss_pred CCccEEEcccCcccccChh
Q 045323 617 HSMSGLDLSCNKLIGEIPL 635 (740)
Q Consensus 617 ~~L~~L~ls~n~l~~~~~~ 635 (740)
++|+.|++++|++.+..+.
T Consensus 2 ~~L~~L~l~~n~i~~~g~~ 20 (24)
T PF13516_consen 2 PNLETLDLSNNQITDEGAS 20 (24)
T ss_dssp TT-SEEE-TSSBEHHHHHH
T ss_pred CCCCEEEccCCcCCHHHHH
Confidence 3555666666665544333
No 85
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=81.16 E-value=0.55 Score=42.98 Aligned_cols=84 Identities=18% Similarity=0.207 Sum_probs=48.8
Q ss_pred CceEEEECCCCCCCCCCCccccccccccccccceeeCCCCCCCCCcEEeCCCCCCcCcccchhcc-cCCCCCEEECCCCC
Q 045323 41 GKVISLDLDGTRKLGDGEGYLNASLFTSFQQLELLDLSILNFKNLEYFNMDFCTAFSNSFLQMSE-LMASLKYLSLSNSY 119 (740)
Q Consensus 41 ~~v~~ldl~~~~~~~~~~~~l~~~~f~~~~~L~~Ldls~~~l~~L~~L~l~~~~~~~~~~~~~l~-~l~~L~~L~Ls~n~ 119 (740)
..|+.+|-++..|..+|. ..+.+++. |+.|.+..|..+.+--.+.++ -.++|+.|++++|.
T Consensus 101 ~~IeaVDAsds~I~~eGl-----e~L~~l~~-------------i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~ 162 (221)
T KOG3864|consen 101 VKIEAVDASDSSIMYEGL-----EHLRDLRS-------------IKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCP 162 (221)
T ss_pred ceEEEEecCCchHHHHHH-----HHHhccch-------------hhhheeccccchhhHHHHHhcccccchheeeccCCC
Confidence 468899999887744332 12233333 333333333444433223332 35899999999886
Q ss_pred -CCCccChhhhcCCCCCCEEEccCC
Q 045323 120 -LNGTILDQGLCELVYLQEVNIDRN 143 (740)
Q Consensus 120 -~~~~~~~~~~~~l~~L~~L~L~~n 143 (740)
|+ .-.-..+.++++|+.|.+.+=
T Consensus 163 rIT-~~GL~~L~~lknLr~L~l~~l 186 (221)
T KOG3864|consen 163 RIT-DGGLACLLKLKNLRRLHLYDL 186 (221)
T ss_pred eec-hhHHHHHHHhhhhHHHHhcCc
Confidence 43 222235778888998888764
No 86
>KOG4242 consensus Predicted myosin-I-binding protein [Cell motility]
Probab=77.54 E-value=9.6 Score=39.90 Aligned_cols=61 Identities=16% Similarity=0.171 Sum_probs=43.0
Q ss_pred CccEEEcccCcccccChhh---hhcCCCCcEEECcCCcCcc----cCCccccCCCCCCEEeCCCCccC
Q 045323 618 SMSGLDLSCNKLIGEIPLQ---IGELSRIHTLNLSHNNLTG----ESPVTFSHMKQVESLDLSYNNLN 678 (740)
Q Consensus 618 ~L~~L~ls~n~l~~~~~~~---l~~l~~L~~L~L~~N~l~~----~~~~~l~~l~~L~~L~Ls~n~l~ 678 (740)
-++.+.++.+.+....-.. ...-+.+.+|++++|.... .+|..+....+++....+.|...
T Consensus 414 ~l~el~ls~~~lka~l~s~in~l~stqtl~kldisgn~mgd~gap~lpkalq~n~rlr~ipds~n~p~ 481 (553)
T KOG4242|consen 414 VLAELSLSPGPLKAGLESAINKLLSTQTLAKLDISGNGMGDGGAPPLPKALQSNCRLRPIPDSLNLPE 481 (553)
T ss_pred cccCcccCCCcccccHHHHHHhhccCcccccccccCCCcccCCCCcCccccCCCCccCCCCCCCCCcc
Confidence 4677888888876333222 3335889999999997764 35666666677888888888776
No 87
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=76.35 E-value=1.6 Score=25.35 Aligned_cols=19 Identities=42% Similarity=0.497 Sum_probs=11.0
Q ss_pred cccceeeCCCCCCCCCcEE
Q 045323 70 QQLELLDLSILNFKNLEYF 88 (740)
Q Consensus 70 ~~L~~Ldls~~~l~~L~~L 88 (740)
.+|+.|++++|+++.++.+
T Consensus 2 ~~L~~L~L~~NkI~~IEnL 20 (26)
T smart00365 2 TNLEELDLSQNKIKKIENL 20 (26)
T ss_pred CccCEEECCCCccceecCc
Confidence 4556666666666555543
No 88
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=75.45 E-value=1.3 Score=47.03 Aligned_cols=62 Identities=26% Similarity=0.254 Sum_probs=29.2
Q ss_pred CCCCcEEECcCCcCcccCC--ccccCCCCCCEEeCCCC--ccCccCCcccccC--CcCceeeccCccccc
Q 045323 640 LSRIHTLNLSHNNLTGESP--VTFSHMKQVESLDLSYN--NLNGKIPPRLIEL--NALAVFSVAFNNLSG 703 (740)
Q Consensus 640 l~~L~~L~L~~N~l~~~~~--~~l~~l~~L~~L~Ls~n--~l~~~~~~~l~~l--~~L~~L~ls~N~l~~ 703 (740)
.+.+..++|++|++..... ..-...|.|..|+|++| .+. ....+.++ ..|+.|=+.+|++..
T Consensus 217 ~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~--~~~el~K~k~l~Leel~l~GNPlc~ 284 (585)
T KOG3763|consen 217 FPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKIS--SESELDKLKGLPLEELVLEGNPLCT 284 (585)
T ss_pred CcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhc--chhhhhhhcCCCHHHeeecCCcccc
Confidence 4556666677776553211 11122356666666666 222 11122222 235556666666643
No 89
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=65.44 E-value=4.5 Score=23.46 Aligned_cols=13 Identities=31% Similarity=0.544 Sum_probs=6.1
Q ss_pred CCCEEeCCCCccC
Q 045323 666 QVESLDLSYNNLN 678 (740)
Q Consensus 666 ~L~~L~Ls~n~l~ 678 (740)
+|+.|+.++|+++
T Consensus 3 ~L~~L~vs~N~Lt 15 (26)
T smart00364 3 SLKELNVSNNQLT 15 (26)
T ss_pred ccceeecCCCccc
Confidence 3444444444444
No 90
>smart00082 LRRCT Leucine rich repeat C-terminal domain.
Probab=62.33 E-value=3.5 Score=28.51 Aligned_cols=10 Identities=50% Similarity=1.055 Sum_probs=8.8
Q ss_pred CCCCCCcCCC
Q 045323 723 NPFLCGQPLL 732 (740)
Q Consensus 723 Np~~c~~~l~ 732 (740)
|||.|+|.+.
T Consensus 1 NP~~CdC~l~ 10 (51)
T smart00082 1 NPFICDCELR 10 (51)
T ss_pred CCccCcCCch
Confidence 8999999864
No 91
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=60.26 E-value=7 Score=23.11 Aligned_cols=14 Identities=43% Similarity=0.584 Sum_probs=9.0
Q ss_pred CCCCEEeCCCCccC
Q 045323 665 KQVESLDLSYNNLN 678 (740)
Q Consensus 665 ~~L~~L~Ls~n~l~ 678 (740)
++|++|||++|.+.
T Consensus 2 ~~L~~LdL~~N~i~ 15 (28)
T smart00368 2 PSLRELDLSNNKLG 15 (28)
T ss_pred CccCEEECCCCCCC
Confidence 35666677766665
No 92
>KOG4242 consensus Predicted myosin-I-binding protein [Cell motility]
Probab=48.56 E-value=1.2e+02 Score=32.21 Aligned_cols=37 Identities=16% Similarity=0.196 Sum_probs=20.1
Q ss_pred CCCCCeeecCCCcceecCCcCCCCCCCCceEeCCCcccc
Q 045323 381 LTKLKRLNLDGNHFIGDIPKTLSNCSALQGLYISDNNIS 419 (740)
Q Consensus 381 l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~i~ 419 (740)
.+.+++++++.|.+....|-.+..-. --+.++.|..+
T Consensus 164 npr~r~~dls~npi~dkvpihl~~p~--~pl~lr~c~ls 200 (553)
T KOG4242|consen 164 NPRARQHDLSPNPIGDKVPIHLPQPG--NPLSLRVCELS 200 (553)
T ss_pred cchhhhhccCCCcccccCCccccCCC--Cccchhhhhhh
Confidence 35667777777777665554443211 11455555544
No 93
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=41.60 E-value=20 Score=38.43 Aligned_cols=83 Identities=23% Similarity=0.159 Sum_probs=42.9
Q ss_pred CCCCCCEEEcCCCCCCCC-CChhHHhcCCCCCEEEccCCc--ccccCCCCCCCCCCCCEEEccCCcccccCch------h
Q 045323 253 HQHDLEYVDLSHLNLTRE-FPNWLLEKNKKLKRLSLVNIS--LFGPFPLPIHCHKNLRVLDVSNNKLQGHIPI------E 323 (740)
Q Consensus 253 ~l~~L~~L~L~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~--~~~~~~~~l~~~~~L~~L~l~~~~l~~~~~~------~ 323 (740)
+.+.+..+++++|++... -...+....|+|++|+|++|. +.......--+...|++|-+.+|++....-. .
T Consensus 216 n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~~el~K~k~l~Leel~l~GNPlc~tf~~~s~yv~~ 295 (585)
T KOG3763|consen 216 NFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISSESELDKLKGLPLEELVLEGNPLCTTFSDRSEYVSA 295 (585)
T ss_pred CCcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcchhhhhhhcCCCHHHeeecCCccccchhhhHHHHHH
Confidence 445667777777776521 111233456778888888772 2221111111234567777777776533221 2
Q ss_pred hhhcCCCCcEEe
Q 045323 324 IGEVLPNLVVLN 335 (740)
Q Consensus 324 ~~~~l~~L~~L~ 335 (740)
+...+|+|..||
T Consensus 296 i~~~FPKL~~LD 307 (585)
T KOG3763|consen 296 IRELFPKLLRLD 307 (585)
T ss_pred HHHhcchheeec
Confidence 223466666554
No 94
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=35.33 E-value=27 Score=20.04 Aligned_cols=13 Identities=38% Similarity=0.227 Sum_probs=7.3
Q ss_pred CCCCCEEEcCCCC
Q 045323 156 LTYLRLLDVSFNQ 168 (740)
Q Consensus 156 l~~L~~L~l~~n~ 168 (740)
+++|++|++++|.
T Consensus 1 c~~L~~L~l~~C~ 13 (26)
T smart00367 1 CPNLRELDLSGCT 13 (26)
T ss_pred CCCCCEeCCCCCC
Confidence 3456666666653
No 95
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=21.59 E-value=50 Score=43.19 Aligned_cols=32 Identities=25% Similarity=0.256 Sum_probs=17.2
Q ss_pred EcccCcccccChhhhhcCCCCcEEECcCCcCc
Q 045323 623 DLSCNKLIGEIPLQIGELSRIHTLNLSHNNLT 654 (740)
Q Consensus 623 ~ls~n~l~~~~~~~l~~l~~L~~L~L~~N~l~ 654 (740)
||++|+|....+..|..+++|++|+|++|.+.
T Consensus 1 DLSnN~LstLp~g~F~~L~sL~~LdLsgNPw~ 32 (2740)
T TIGR00864 1 DISNNKISTIEEGICANLCNLSEIDLSGNPFE 32 (2740)
T ss_pred CCCCCcCCccChHHhccCCCceEEEeeCCccc
Confidence 35555555444444555555555555555444
No 96
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=21.47 E-value=50 Score=43.12 Aligned_cols=33 Identities=18% Similarity=0.276 Sum_probs=30.2
Q ss_pred ECcCCcCcccCCccccCCCCCCEEeCCCCccCc
Q 045323 647 NLSHNNLTGESPVTFSHMKQVESLDLSYNNLNG 679 (740)
Q Consensus 647 ~L~~N~l~~~~~~~l~~l~~L~~L~Ls~n~l~~ 679 (740)
||++|+|+.+.+..|..+++|+.|+|++|++..
T Consensus 1 DLSnN~LstLp~g~F~~L~sL~~LdLsgNPw~C 33 (2740)
T TIGR00864 1 DISNNKISTIEEGICANLCNLSEIDLSGNPFEC 33 (2740)
T ss_pred CCCCCcCCccChHHhccCCCceEEEeeCCcccc
Confidence 689999998888999999999999999999873
No 97
>KOG1665 consensus AFH1-interacting protein FIP2, contains BTB/POZ domain and pentapeptide repeats [General function prediction only]
Probab=21.25 E-value=84 Score=29.38 Aligned_cols=152 Identities=21% Similarity=0.252 Sum_probs=0.0
Q ss_pred ceEEEECCCCCCCCCCCccccccccccccccceeeCCC--CCCCCCcEEeCCCCCCcCcccchhcccCCCCCEEECCCCC
Q 045323 42 KVISLDLDGTRKLGDGEGYLNASLFTSFQQLELLDLSI--LNFKNLEYFNMDFCTAFSNSFLQMSELMASLKYLSLSNSY 119 (740)
Q Consensus 42 ~v~~ldl~~~~~~~~~~~~l~~~~f~~~~~L~~Ldls~--~~l~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~n~ 119 (740)
+...+++|| -.|..||++. .+..+|+.-+++ ...+. +..|+.-|+++.-
T Consensus 132 RfqGvNlSG-------------------aDLskLDlr~inFkyA~ls~c~ls-htNL~---------ca~lerADl~gsi 182 (302)
T KOG1665|consen 132 RFQGVNLSG-------------------ADLSKLDLRLINFKYANLSNCNLS-HTNLQ---------CAKLERADLEGSI 182 (302)
T ss_pred eeecccccc-------------------cchhhcccccccceehhhcccccc-ccchh---------hhhhcccccccch
Q ss_pred CCCccChhhhcCCCCCCEEEccCCcccccccccCcCCCCCCEEEcCCCCCCCCCCccccCCCCCCCEEeccCCcccccCC
Q 045323 120 LNGTILDQGLCELVYLQEVNIDRNNLSGSLPWCLANLTYLRLLDVSFNQLTENISSSPLMNLTYIEELWLSNNHFQISIS 199 (740)
Q Consensus 120 ~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~i~~~~l~~l~~L~~L~l~~n~~~~~~~ 199 (740)
+.-.+..+.=.-+.+++--.|.+|++. .|..+. .+|+--+|.++.+.+.-....--....|+.-++.++.+.+.
T Consensus 183 l~cA~L~~v~~lcaN~eGA~L~gcNfe--dps~~k--aNLeganLkG~~~egs~m~ginLrvA~Lknanle~~NLrgA-- 256 (302)
T KOG1665|consen 183 LHCAILREVEMLCANAEGASLKGCNFE--DPSGLK--ANLEGANLKGADMEGSQMTGINLRVATLKNANLENCNLRGA-- 256 (302)
T ss_pred hhhhhhhhhhheecccccccccCcCCC--Cccchh--ccccccccccccccccccccceeEeccccccccccCccccc--
Q ss_pred ccccccCCCccEEeCCCccccccccCCCCCCccccEEEecCCCCCCCCChhhcCCCCCCEEEcCCCCCCC
Q 045323 200 LEPFFNHSKLKFFDGDIYAEIETSHSSLTPKFQLTSISLFGHGDSGIFPKFLYHQHDLEYVDLSHLNLTR 269 (740)
Q Consensus 200 ~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~L~~~~~~~ 269 (740)
+|.--++.+|.+++. .|++-+|++.++.+
T Consensus 257 --------------------------------~LaGadLencnlsG~---------dLQeAnLRg~Nlk~ 285 (302)
T KOG1665|consen 257 --------------------------------NLAGADLENCNLSGA---------DLQEANLRGVNLKE 285 (302)
T ss_pred --------------------------------cccCCccccCCCCCc---------chhHhhcccCchhh
Done!