Query 045324
Match_columns 394
No_of_seqs 233 out of 721
Neff 5.6
Searched_HMMs 46136
Date Fri Mar 29 12:08:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045324.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045324hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF00777 Glyco_transf_29: Glyc 100.0 5E-52 1.1E-56 401.4 9.2 215 144-384 33-266 (266)
2 KOG2692 Sialyltransferase [Car 100.0 7.5E-48 1.6E-52 389.6 12.9 250 116-381 106-368 (376)
3 PF06002 CST-I: Alpha-2,3-sial 94.2 0.19 4.1E-06 49.9 8.0 55 172-229 2-57 (291)
4 TIGR00991 3a0901s02IAP34 GTP-b 18.9 1E+02 0.0023 31.3 3.1 54 132-192 6-63 (313)
5 COG3462 Predicted membrane pro 18.7 3.6E+02 0.0078 23.5 5.8 19 58-76 97-115 (117)
6 PF10038 DUF2274: Protein of u 17.4 58 0.0013 25.9 0.7 44 49-95 22-69 (69)
7 PF12273 RCR: Chitin synthesis 15.7 1.5E+02 0.0033 25.6 3.0 13 18-30 15-27 (130)
8 PF11293 DUF3094: Protein of u 15.6 2.3E+02 0.005 21.6 3.5 24 2-25 25-50 (55)
9 PF03875 Statherin: Statherin; 15.0 1E+02 0.0022 21.8 1.4 20 63-82 1-20 (42)
10 PF08184 Cuticle_2: Cuticle pr 11.7 1.1E+02 0.0023 22.9 0.7 18 333-352 33-50 (59)
No 1
>PF00777 Glyco_transf_29: Glycosyltransferase family 29 (sialyltransferase); InterPro: IPR001675 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 29 (GT29 from CAZY) comprises enzymes with a number of known activities; sialyltransferase (2.4.99 from EC), beta-galactosamide alpha-2,6-sialyltransferase (2.4.99.1 from EC), alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase (2.4.99.3 from EC), beta-galactoside alpha-2,3-sialyltransferase (2.4.99.4 from EC), N-acetyllactosaminide alpha-2,3-sialyltransferase (2.4.99.6 from EC), alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase (2.4.99.8 from EC); lactosylceramide alpha-2,3-sialyltransferase (2.4.99.9 from EC). These enzymes use a nucleotide monophosphosugar as the donor (CMP-NeuA) instead of a nucleotide diphosphosugar. Sialyltransferase may be responsible for the synthesis of the sequence NEUAC-Alpha-2,3-GAL-Beta-1,3-GALNAC-, found on sugar chains O-linked to thr or ser and also as a terminal sequenec on certain gagnliosides. These enzymes catalyse sialyltransfer reactions during glycosylation, and are type II membrane proteins.; GO: 0008373 sialyltransferase activity, 0006486 protein glycosylation, 0030173 integral to Golgi membrane; PDB: 2WNF_A 2WML_A 2WNB_A.
Probab=100.00 E-value=5e-52 Score=401.43 Aligned_cols=215 Identities=28% Similarity=0.407 Sum_probs=115.1
Q ss_pred hHHHHHHHHhccCCccccCCCCCCCCCcceEEEEcCCCcCCCCCCCccccccchhhhcCcccccccccccCCCccccccc
Q 045324 144 SDVMNDLVRLVKHSIDKHNGLIGSDKKYESCAVVGNSGILLNSNYGDLIDSHEMVIRLNNARIERYEQHVGSKTSLSFVN 223 (394)
Q Consensus 144 p~v~~~l~~~i~~p~~~~~~~~~~~~~c~rCAVVGNSGIL~gS~~G~eIDshD~VIR~N~AP~~GfE~DVGsKTtl~~~n 223 (394)
..+.+.+..++|.+..... .....+|++||||||||||+||+||+|||+||||||||+||++|||+|||+|||++++|
T Consensus 33 ~~i~~~l~~l~~~~~p~~~--~~~~~~~~~CAVVGNsGiL~~S~~G~eID~~D~ViR~N~aP~~gfe~DVG~kT~~~~~n 110 (266)
T PF00777_consen 33 FKISKELYKLLPESSPFSL--KHFKRRCRTCAVVGNSGILLGSGCGKEIDSHDFVIRMNLAPVKGFEKDVGSKTTLRTMN 110 (266)
T ss_dssp --HHHHHHHHTTT-S-S-----TTTTG--EEEEE--BGGGTT---HHHHHTSSEEEEETT---TT-HHHH-S--SEEEEB
T ss_pred hhHHHHHHHhCcccCcccc--ccccCCCCeEEEEcCChHhccCccccccccCeeEEecCCccccccccccCccccccccC
Confidence 4567888888886432111 11234499999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhhhccCCccccCCCCCCCeEEEEecccchhhhhhhcCC----------CCCC---ceecCCccchhhhhhhhhcc
Q 045324 224 SNILHLCARREGCFCHPYGENVPMIMYICQPMHFLDYTRCNGS----------HKAP---LLITDPRFDMLCSRIVKYYS 290 (394)
Q Consensus 224 ~sil~~~~~~~~~~~~~y~~~v~~vl~i~~P~~~ld~~~~~~~----------~k~~---~~i~~p~f~~l~~ri~~y~~ 290 (394)
++++.... ..+.++..+ ...+.+..++.|.... +... ......++.+++|.++++
T Consensus 111 ~~~~~~~~-------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-- 178 (266)
T PF00777_consen 111 PSSLQRRY-------NLLDKDTFL---VLLPFKGSDLVWLPAFSSKKNTRKSFWAYKALEKKYPNQKVRILHPEFLRY-- 178 (266)
T ss_dssp TTB----------------TT-EE---EE--SSHHHHHHHHHHTTT-----BSSSB--S-----GGGEEEB-HHHHHH--
T ss_pred hhHhhhhc-------cccccccce---eccccccchhhhhhhhhccccccccccchhhhhhccCcceeeecCHHHHhh--
Confidence 99985421 112333322 2234544444443110 0000 001112333445544433
Q ss_pred cchhhhhhhhhhhhhccccCCCccccChHHHHHHHHhhcCCeEEEeeeec--CCCCcCcccCCCCCC----CCCCChHHH
Q 045324 291 LKGFVEETGKSLEEWGSAHEGSLFHYSSGMQAVMLSLGICDKVSIFGFGK--SAAAKHHYHTNQKAE----LHLHDYNAE 364 (394)
Q Consensus 291 ~~~Fl~~t~~~~~~W~~~~~~~~~~pSTG~lav~lAL~lCDeV~vYGFg~--~~~~~~HYye~~~~~----~~~Hd~~~E 364 (394)
....|..... ...+||||++++++||++||||+|||||| ....+|||||+.+.. ...|+|+.|
T Consensus 179 ----------~~~~~~~~~~-~~~~pSTG~~~~~~Al~~CD~V~lYGF~p~~~~~~~~HYyd~~~~~~~~~~~~H~~~~E 247 (266)
T PF00777_consen 179 ----------IWRFWLRRGG-RGNRPSTGLMAVSLALHFCDEVHLYGFWPPDNRTVPYHYYDNVKPKPCFFYKNHDMPAE 247 (266)
T ss_dssp ----------HHHHTSTT----SSS--HHHHHHHHHHHH-SEEEEES-S---TTS---BTTB------------S-HHHH
T ss_pred ----------HHHHhhhhhc-cccCCCccHHHHHHHhcCCCeEEEEEEEecCCCCCccccccCccccccCCCCCCCCHHH
Confidence 2345654322 45689999999999999999999999999 346899999996532 346999999
Q ss_pred HHHHHHHHHcCCCcccccCC
Q 045324 365 YVFYHDLVKNQRAVPFISDK 384 (394)
Q Consensus 365 ~~~l~~L~~~~~~~~fit~k 384 (394)
++++++||+. ++++++++|
T Consensus 248 ~~~~~~L~~~-Gvi~l~~g~ 266 (266)
T PF00777_consen 248 FRLLKRLHKQ-GVIKLHTGK 266 (266)
T ss_dssp HHHHHHHHHT-TSSEEE---
T ss_pred HHHHHHHHHC-CCeEEecCC
Confidence 9999999988 888988876
No 2
>KOG2692 consensus Sialyltransferase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.5e-48 Score=389.65 Aligned_cols=250 Identities=28% Similarity=0.321 Sum_probs=168.9
Q ss_pred ccCCchhHHhHHHhhhhchhhHhhhcchhHHHHHHHHhccCCccccCCCCCCCCCcceEEEEcCCCcCCCCCCCcccccc
Q 045324 116 TLRSPMFYRYWLDFRRNLNDWARKKKFQSDVMNDLVRLVKHSIDKHNGLIGSDKKYESCAVVGNSGILLNSNYGDLIDSH 195 (394)
Q Consensus 116 ~l~~~~~~~~Wl~~~~~~~~W~rl~~~~p~v~~~l~~~i~~p~~~~~~~~~~~~~c~rCAVVGNSGIL~gS~~G~eIDsh 195 (394)
........++|..+..+.+.|.+...+.++ ++..+|+-.+ .... ....|++||||||||+|+||+||+|||+|
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~p~~~p--~~~~-~~~~c~~CAVVGNsG~L~~S~~G~eID~~ 178 (376)
T KOG2692|consen 106 FSRSKPSLPLGDSMLYSRSRWRRLEVIDPP----LFLLLPGVSP--LFPL-LFKRCRRCAVVGNSGILLNSRLGREIDSH 178 (376)
T ss_pred ceeccccccchhhheecccccccccccCcc----hhhhccccCC--Cccc-ccccCceEEEECCcceeCCCccccccccc
Confidence 344445556666777888999998888887 4555554321 1111 12229999999999999999999999999
Q ss_pred chhhhcCcccccccccccCCCcccccccchhhhhhhccCCccccCCCCCCCeEEEEecccchhhhhhhcCC-CCC---Cc
Q 045324 196 EMVIRLNNARIERYEQHVGSKTSLSFVNSNILHLCARREGCFCHPYGENVPMIMYICQPMHFLDYTRCNGS-HKA---PL 271 (394)
Q Consensus 196 D~VIR~N~AP~~GfE~DVGsKTtl~~~n~sil~~~~~~~~~~~~~y~~~v~~vl~i~~P~~~ld~~~~~~~-~k~---~~ 271 (394)
|||||||+|||+|||+|||+|||++++||+++....+.... ..+++ + ++++|.|.+..+..|.... .+. ..
T Consensus 179 D~ViR~N~APt~gye~DVGsKTt~r~~n~~Sv~~~~~~~~~-~~~~~--~--~~vv~~~~~~~~~~~~~~~~~~~~~~~~ 253 (376)
T KOG2692|consen 179 DFVIRLNLAPTKGYEKDVGSKTTLRTVNPPSVPTLLRNYLL-DEPKR--V--TFVVWLPFKNMSLLWLPAFYNTVNLRTG 253 (376)
T ss_pred cEEEECCCCCccchhcccccceeEEEEcchhhhhccccccc-ccccc--c--eEEEEcCccchhhhhhhhhccccccccc
Confidence 99999999999999999999999999997776543222111 11222 2 3445567665544432111 000 00
Q ss_pred eecCCccchhhhhhhhhcccchhhhhhhhhhhhhccccCCCccccChHHHHHHHHhhcCCeEEEeeeecCCC------Cc
Q 045324 272 LITDPRFDMLCSRIVKYYSLKGFVEETGKSLEEWGSAHEGSLFHYSSGMQAVMLSLGICDKVSIFGFGKSAA------AK 345 (394)
Q Consensus 272 ~i~~p~f~~l~~ri~~y~~~~~Fl~~t~~~~~~W~~~~~~~~~~pSTG~lav~lAL~lCDeV~vYGFg~~~~------~~ 345 (394)
....+......+..+.++. .-|..++ ...|...++..+++||||++++++|+|+||||++||||+++. .+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~-~~f~~~~---~~~~~~s~~~~~~~pSTG~l~~~lAl~lCdeV~lyGF~~~~~~~~~~~~~ 329 (376)
T KOG2692|consen 254 YWPVPRLYPVKPDKILLLD-PLFILYT---VDRYLKSHGVQPKRPSTGLLAVTLALHLCDEVHLYGFGPDNRCRNSHYVP 329 (376)
T ss_pred eeecceeccCCcCeEeecC-hHHHHHH---HHHHhhCCCCCCCCCChhHHHHHHHHhhcCeEEEEEecCCCCCccCCCCc
Confidence 0111111112222222221 1244443 234555565557799999999999999999999999999853 47
Q ss_pred CcccCCCCC---CCCCCChHHHHHHHHHHHHcCCCcccc
Q 045324 346 HHYHTNQKA---ELHLHDYNAEYVFYHDLVKNQRAVPFI 381 (394)
Q Consensus 346 ~HYye~~~~---~~~~Hd~~~E~~~l~~L~~~~~~~~fi 381 (394)
+||||+.++ +...|+++.|...+++|++++......
T Consensus 330 ~hYyd~~~~~~~~~~~H~~~~e~~~~~~l~~~g~~~~~~ 368 (376)
T KOG2692|consen 330 YHYYDNAKPDELFYGLHDMPLEGEALRKLHEKGVIILLL 368 (376)
T ss_pred cccccccccchhhhhhhhchhHHHHHHHHHhcccccccc
Confidence 899999887 678999999999999999997554433
No 3
>PF06002 CST-I: Alpha-2,3-sialyltransferase (CST-I); InterPro: IPR009251 This entry represents several alpha-2,3-sialyltransferase (2.4.99 from EC) proteins, most of which are found in the food-borne pathogen Campylobacter jejuni. Sialyltransferases transfer a sialic acid moiety from cytidine-5'-monophospho-N-acetyl-neuraminic acid (CMP-NeuAc) to terminal positions of various key glycoconjugates, which play critical roles in cell recognition and adherence []. The structure of Cst-II alpha-2,3-sialyltransferase from C. jejuni consists of a 3-layer alpha/beta/alpha topology. Cst-II catalytic mechanism involves an essential histidine (general base) and two tyrosine residues (coordination of the phosphate leaving group) to carry out substrate binding and glycosyl transfer. ; PDB: 2X63_A 2X61_B 1RO7_B 2WQQ_A 2X62_B 1RO8_A 2DRJ_A 2P56_A 2P2V_A.
Probab=94.20 E-value=0.19 Score=49.91 Aligned_cols=55 Identities=24% Similarity=0.330 Sum_probs=37.2
Q ss_pred ceEEEEcCCCcCCCCCCCccccccchhhhcCcccccc-cccccCCCcccccccchhhhh
Q 045324 172 ESCAVVGNSGILLNSNYGDLIDSHEMVIRLNNARIER-YEQHVGSKTSLSFVNSNILHL 229 (394)
Q Consensus 172 ~rCAVVGNSGIL~gS~~G~eIDshD~VIR~N~AP~~G-fE~DVGsKTtl~~~n~sil~~ 229 (394)
+.|.|.|||-+|..-..|. +-.-+.|||||.-=... | -+|.+-.-+++|+.+...
T Consensus 2 k~~~i~gngps~~~~~~~~-~~~~~~~fr~n~fy~e~~~--~lg~~~~~VFFn~~vf~~ 57 (291)
T PF06002_consen 2 KPAIIAGNGPSLKEIDYSL-LPKDFDVFRCNQFYFEDKY--YLGKKVKAVFFNPCVFFE 57 (291)
T ss_dssp SEEEEE-SSGGGGC--GGG-S-SSEEEEEETTGGG-SBE--TT-SEECEEEE-GGGHHH
T ss_pred CceEEeCCCCchhhcchhh-CCCcccEEEecceecchhh--hcccceeEEEechHHHHH
Confidence 4799999999998888877 44555699999864421 2 379999999999987653
No 4
>TIGR00991 3a0901s02IAP34 GTP-binding protein (Chloroplast Envelope Protein Translocase).
Probab=18.88 E-value=1e+02 Score=31.27 Aligned_cols=54 Identities=22% Similarity=0.391 Sum_probs=34.8
Q ss_pred hchhhHhhhcchhHHHHHHHHhccCCccccCCCCCCCCCcceEEEEcCCCc----CCCCCCCccc
Q 045324 132 NLNDWARKKKFQSDVMNDLVRLVKHSIDKHNGLIGSDKKYESCAVVGNSGI----LLNSNYGDLI 192 (394)
Q Consensus 132 ~~~~W~rl~~~~p~v~~~l~~~i~~p~~~~~~~~~~~~~c~rCAVVGNSGI----L~gS~~G~eI 192 (394)
..++|..+++|.+..-.+|.+++..-. .....-.+.+|||.+|. +.|+=+|.++
T Consensus 6 ~~~~w~g~~~~~~~tq~~l~~~l~~l~-------~~~~~~~rIllvGktGVGKSSliNsIlG~~v 63 (313)
T TIGR00991 6 TPREWVGIQQFPPATQTKLLELLGKLK-------EEDVSSLTILVMGKGGVGKSSTVNSIIGERI 63 (313)
T ss_pred cCcceeccccCCHHHHHHHHHHHHhcc-------cccccceEEEEECCCCCCHHHHHHHHhCCCc
Confidence 458899999999987777776663211 01233447899999994 3345455543
No 5
>COG3462 Predicted membrane protein [Function unknown]
Probab=18.66 E-value=3.6e+02 Score=23.52 Aligned_cols=19 Identities=21% Similarity=0.345 Sum_probs=17.1
Q ss_pred HHhhhccCChhhHHHHHHH
Q 045324 58 KLAAIDLGEEKSKQEIERL 76 (394)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~ 76 (394)
+||+-|+.|++-++.++.|
T Consensus 97 R~AkGEItEEEY~r~~~~i 115 (117)
T COG3462 97 RYAKGEITEEEYRRIIRTI 115 (117)
T ss_pred HHhcCCCCHHHHHHHHHHh
Confidence 6999999999999988876
No 6
>PF10038 DUF2274: Protein of unknown function (DUF2274); InterPro: IPR018733 Members of this family of hypothetical bacterial proteins have no known function.
Probab=17.40 E-value=58 Score=25.90 Aligned_cols=44 Identities=23% Similarity=0.363 Sum_probs=31.6
Q ss_pred ccchhHHHHHHhhh---ccCC-hhhHHHHHHHhcCCCCCCCcccccccccc
Q 045324 49 APVFNSTFLKLAAI---DLGE-EKSKQEIERLLEGNFDSPGRHRTFASWRR 95 (394)
Q Consensus 49 ~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (394)
++.+++.|..||++ +-|+ .+.-.-|.-+|+.=.+++ |-|+.|||
T Consensus 22 pa~l~rdL~~Ya~~~~~~~g~~~~~~~Li~~MLerFmatD---RgF~kaRr 69 (69)
T PF10038_consen 22 PASLHRDLVAYAEALAREYGQAADPAKLIPPMLERFMATD---RGFAKARR 69 (69)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhc---HHHHHhcC
Confidence 67899999999976 4444 355666777777555555 77888875
No 7
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=15.69 E-value=1.5e+02 Score=25.64 Aligned_cols=13 Identities=8% Similarity=-0.015 Sum_probs=6.0
Q ss_pred HHHHHHHHHhhcC
Q 045324 18 AVTLIFRIAVHGG 30 (394)
Q Consensus 18 ~~~~~~~~~~~~~ 30 (394)
+++++|+.+-||-
T Consensus 15 ~~~~~~~~~rRR~ 27 (130)
T PF12273_consen 15 FLFLFYCHNRRRR 27 (130)
T ss_pred HHHHHHHHHHHHh
Confidence 3344455554444
No 8
>PF11293 DUF3094: Protein of unknown function (DUF3094); InterPro: IPR021444 This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
Probab=15.57 E-value=2.3e+02 Score=21.60 Aligned_cols=24 Identities=21% Similarity=0.681 Sum_probs=12.9
Q ss_pred CCCCchhHHHH--HHHHHHHHHHHHH
Q 045324 2 KRPLRPVFTIL--LLTILAVTLIFRI 25 (394)
Q Consensus 2 ~~~~~~~~~~~--~~~~~~~~~~~~~ 25 (394)
+++.||...++ +.++..+.+.+|.
T Consensus 25 R~PFrP~~Ll~~li~Vv~gl~llS~l 50 (55)
T PF11293_consen 25 RKPFRPWRLLIVLIVVVIGLGLLSRL 50 (55)
T ss_pred cCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 46678776633 3334455555553
No 9
>PF03875 Statherin: Statherin; InterPro: IPR005575 Statherin functions biologically to inhibit the nucleation and growth of calcium phosphate minerals. The N terminus of statherin is highly charged, the glutamic acids of which have been shown to be important in the recognition hydroxyapatite [].
Probab=15.01 E-value=1e+02 Score=21.84 Aligned_cols=20 Identities=30% Similarity=0.509 Sum_probs=17.1
Q ss_pred ccCChhhHHHHHHHhcCCCC
Q 045324 63 DLGEEKSKQEIERLLEGNFD 82 (394)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~ 82 (394)
|-+|++..+++.++-+|+++
T Consensus 1 dsseekflrrl~r~~~gryg 20 (42)
T PF03875_consen 1 DSSEEKFLRRLGRFFYGRYG 20 (42)
T ss_pred CchHHHHHHHHHhhcccccC
Confidence 56889999999999999754
No 10
>PF08184 Cuticle_2: Cuticle protein 7 isoform family; InterPro: IPR012540 This family consists of cuticle protein 7 isoforms that are isolated from the carapace cuticle of a juvenile horseshoe crab, Limulus polyphemus. There are 3 isoforms of cuticle protein 7. The 3 isoforms are N-terminally blocked but could be deblocked by treatment with pyroglutaminase, showing that the N-terminal residue is a pyroglutamine residue [].; GO: 0042302 structural constituent of cuticle
Probab=11.69 E-value=1.1e+02 Score=22.89 Aligned_cols=18 Identities=28% Similarity=0.565 Sum_probs=12.6
Q ss_pred EEEeeeecCCCCcCcccCCC
Q 045324 333 VSIFGFGKSAAAKHHYHTNQ 352 (394)
Q Consensus 333 V~vYGFg~~~~~~~HYye~~ 352 (394)
--.|||+.. .+||||..-
T Consensus 33 apfygfgfe--hpyhyypgy 50 (59)
T PF08184_consen 33 APFYGFGFE--HPYHYYPGY 50 (59)
T ss_pred Cceeccccc--cccccCCcc
Confidence 346888874 578888653
Done!