Your job contains 1 sequence.
>045333
MAPELGLLSSTQHKKLAQSQQNQPSPSLSPGKTWMLNQKREPQEDDDSWEVRAFAEDTGN
IMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHHHQAQPHASSSSSTLIIPT
TQEFTANSGYCLLYQLPNPNGGVFASTTMTACAIDDSPSTLLSISPYPPNNLIGLPPSTN
FPVASQCYSTKDPLGSINDNSNACNESAIEELDLELRLGQRPTPT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 045333
(225 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2129495 - symbol:AT4G17810 "AT4G17810" species... 341 5.4e-31 1
TAIR|locus:2040726 - symbol:ZFP10 "AT2G37740" species:370... 240 3.9e-24 2
TAIR|locus:505006582 - symbol:RBE "AT5G06070" species:370... 200 2.0e-23 3
TAIR|locus:2053796 - symbol:ZFP11 "AT2G42410" species:370... 186 9.3e-21 3
TAIR|locus:2086268 - symbol:SUP "AT3G23130" species:3702 ... 221 2.8e-18 1
TAIR|locus:2083574 - symbol:TAC1 "AT3G09290" species:3702... 137 3.0e-14 2
TAIR|locus:2084390 - symbol:AT3G53820 "AT3G53820" species... 129 7.4e-12 2
TAIR|locus:2158367 - symbol:AT5G43540 "AT5G43540" species... 130 1.2e-11 2
TAIR|locus:2086193 - symbol:URO "AT3G23140" species:3702 ... 109 4.7e-06 2
TAIR|locus:2825107 - symbol:ZFP7 "AT1G24625" species:3702... 116 2.3e-05 1
TAIR|locus:2146960 - symbol:ZFP3 "AT5G25160" species:3702... 115 4.8e-05 1
TAIR|locus:2174547 - symbol:ZFP2 "AT5G57520" species:3702... 105 6.4e-05 1
TAIR|locus:2025777 - symbol:ZFP1 "AT1G80730" species:3702... 112 0.00010 1
TAIR|locus:2019723 - symbol:ZFP6 "AT1G67030" species:3702... 104 0.00016 2
TAIR|locus:2181007 - symbol:AT5G01860 "AT5G01860" species... 109 0.00021 1
TAIR|locus:2143300 - symbol:AT5G27880 "AT5G27880" species... 101 0.00042 2
TAIR|locus:2156529 - symbol:LATE "LATE FLOWERING" species... 102 0.00069 1
TAIR|locus:2199367 - symbol:AT1G68360 species:3702 "Arabi... 106 0.00070 1
TAIR|locus:2159088 - symbol:KNU "AT5G14010" species:3702 ... 100 0.00087 1
>TAIR|locus:2129495 [details] [associations]
symbol:AT4G17810 "AT4G17810" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0006417 "regulation of
translation" evidence=RCA] [GO:0009657 "plastid organization"
evidence=RCA] [GO:0009965 "leaf morphogenesis" evidence=RCA]
[GO:0030154 "cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR007087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 EMBL:CP002687 GO:GO:0008270
GO:GO:0003700 GO:GO:0005622 EMBL:BT010828 EMBL:BT011301
IPI:IPI00532540 RefSeq:NP_193516.2 UniGene:At.32965
ProteinModelPortal:Q6NNI6 SMR:Q6NNI6 EnsemblPlants:AT4G17810.1
GeneID:827503 KEGG:ath:AT4G17810 TAIR:At4g17810
HOGENOM:HOG000092981 InParanoid:Q6NNI6 OMA:NISGTTW PhylomeDB:Q6NNI6
ProtClustDB:CLSN2681607 Genevestigator:Q6NNI6 Uniprot:Q6NNI6
Length = 204
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 93/212 (43%), Positives = 114/212 (53%)
Query: 31 GKTWMLNQKR--EPQEDDDSWEVRAFAEDT-GNIMGTTWPPRSYTCTFCRREFRSAQALG 87
G WM N + E ++DD+SWEV+AF +DT GNI GTTWPPRSYTC FCRREFRSAQALG
Sbjct: 3 GGAWMWNPNKIEELEDDDESWEVKAFEQDTKGNISGTTWPPRSYTCNFCRREFRSAQALG 62
Query: 88 GHMNVHRRDRARLXXXXXXXXXXXXXX----TLI------IPTTQ---EFTANS--GYCL 132
GHMNVHRRDRA L+ +PTT + TA++ G
Sbjct: 63 GHMNVHRRDRASSRAHQGSTVAAAARSGHGGMLLNSCAPPLPTTTLIIQSTASNIEGLSH 122
Query: 133 LYQLPNPNGGVFASTTMTACAIDDSPSTLLSISPYPPNNL--IGLPPSTNFPVASQCYST 190
YQL NP+G +F ++ D + L + +PP+NL L P YST
Sbjct: 123 FYQLQNPSG-IFGNS-------GDMVN-LYGTTSFPPSNLPFSMLNSPVEVPPRLIEYST 173
Query: 191 KDPLGSINDNSNACNESAIEELDLELRLGQRP 222
D SI A S ++ELDLELRLG P
Sbjct: 174 GDD-ESIGSMKEATGTS-VDELDLELRLGHHP 203
>TAIR|locus:2040726 [details] [associations]
symbol:ZFP10 "AT2G37740" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR007087 InterPro:IPR015880
PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355 EMBL:AC004684
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008270 GO:GO:0003700
GO:GO:0005622 HSSP:Q38895 IPI:IPI00531677 PIR:T02540
RefSeq:NP_181310.1 UniGene:At.64966 ProteinModelPortal:O80942
SMR:O80942 STRING:O80942 EnsemblPlants:AT2G37740.1 GeneID:818351
KEGG:ath:AT2G37740 TAIR:At2g37740 eggNOG:NOG243698
HOGENOM:HOG000241322 InParanoid:O80942 OMA:ITRNEES PhylomeDB:O80942
ProtClustDB:CLSN2912907 ArrayExpress:O80942 Genevestigator:O80942
Uniprot:O80942
Length = 304
Score = 240 (89.5 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
Identities = 62/136 (45%), Positives = 77/136 (56%)
Query: 46 DDSWEVRAFAEDTGNIMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLXXXXX 105
+ SWE AFAED + G+ WPPRSYTC+FCRREF+SAQALGGHMNVHRRDRARL
Sbjct: 16 ESSWEELAFAED--DAAGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQADD 73
Query: 106 XXXXXXXXXTLIIPTTQE---FTANSGYCLLYQLPNPNGGVFASTTMTACAIDDSPSTLL 162
+ P+ ++ S Y L++ PN F T +C ID S S+ L
Sbjct: 74 QYLFPKSSSSPEYPSHKDSDNIHETSCYTLVFNT-KPN--YFK--TQHSCVIDLSSSSSL 128
Query: 163 SISPY-PPNNLI-GLP 176
PY P+ + GLP
Sbjct: 129 ---PYLTPSRVSSGLP 141
Score = 51 (23.0 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 189 STKDPLGSINDNSNACNESAIEELDLELRLGQRP 222
S K + + N+ S + E+LDLELRLG P
Sbjct: 268 SCKSDIITRNEESKHKGDR-FEDLDLELRLGTDP 300
>TAIR|locus:505006582 [details] [associations]
symbol:RBE "AT5G06070" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0009934 "regulation of meristem structural organization"
evidence=NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048441 "petal development" evidence=IMP] [GO:0048446 "petal
morphogenesis" evidence=RCA] [GO:0009409 "response to cold"
evidence=IEP] InterPro:IPR007087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030154 GO:GO:0046872 GO:GO:0009409
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0048441
EMBL:AP002030 EMBL:AB107371 EMBL:AY088861 IPI:IPI00532751
RefSeq:NP_568161.1 UniGene:At.32906 ProteinModelPortal:Q9LHS9
SMR:Q9LHS9 EnsemblPlants:AT5G06070.1 GeneID:830494
KEGG:ath:AT5G06070 TAIR:At5g06070 eggNOG:NOG283442
HOGENOM:HOG000124683 InParanoid:Q9LHS9 OMA:INGHHEE PhylomeDB:Q9LHS9
ProtClustDB:CLSN2917580 Genevestigator:Q9LHS9 GermOnline:AT5G06070
Uniprot:Q9LHS9
Length = 226
Score = 200 (75.5 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 39/53 (73%), Positives = 43/53 (81%)
Query: 50 EVRAFA--EDTGNIMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARL 100
E RAFA E+ G G WPPRSY+C+FC REF+SAQALGGHMNVHRRDRARL
Sbjct: 32 EERAFASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARL 84
Score = 52 (23.4 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 11/13 (84%), Positives = 11/13 (84%)
Query: 210 EELDLELRLGQRP 222
EELDLELRLG P
Sbjct: 210 EELDLELRLGADP 222
Score = 41 (19.5 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 190 TKDPLGSINDNSNACNESAIE 210
T+ P G+ + S+ CN + +E
Sbjct: 121 TRKPNGTKREISDVCNNNVLE 141
>TAIR|locus:2053796 [details] [associations]
symbol:ZFP11 "AT2G42410" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR007087 InterPro:IPR015880
PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0008270 GO:GO:0003700 GO:GO:0005622
EMBL:AC005956 HSSP:Q38895 HOGENOM:HOG000240643 EMBL:AB493586
IPI:IPI00548520 PIR:F84853 RefSeq:NP_181770.1 UniGene:At.53101
ProteinModelPortal:Q9SLB8 SMR:Q9SLB8 EnsemblPlants:AT2G42410.1
GeneID:818842 KEGG:ath:AT2G42410 TAIR:At2g42410 eggNOG:NOG250221
InParanoid:Q9SLB8 OMA:SAIDACH PhylomeDB:Q9SLB8
ProtClustDB:CLSN2913314 ArrayExpress:Q9SLB8 Genevestigator:Q9SLB8
Uniprot:Q9SLB8
Length = 214
Score = 186 (70.5 bits), Expect = 9.3e-21, Sum P(3) = 9.3e-21
Identities = 31/35 (88%), Positives = 35/35 (100%)
Query: 66 WPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARL 100
WPP++YTC+FCRREFRSAQALGGHMNVHRRDRA+L
Sbjct: 44 WPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKL 78
Score = 43 (20.2 bits), Expect = 9.3e-21, Sum P(3) = 9.3e-21
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 137 PNPNGGVFASTTMTACAIDDSPSTLLS-ISPYPPNNLIGLPPSTNF 181
PNPN +S++ T ++ S + S +P+P L +T++
Sbjct: 97 PNPNFSSSSSSSTTTAHLEPSLTNQRSKTTPFPSARFDLLDSTTSY 142
Score = 38 (18.4 bits), Expect = 9.3e-21, Sum P(3) = 9.3e-21
Identities = 8/8 (100%), Positives = 8/8 (100%)
Query: 212 LDLELRLG 219
LDLELRLG
Sbjct: 205 LDLELRLG 212
>TAIR|locus:2086268 [details] [associations]
symbol:SUP "AT3G23130" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IMP;TAS] [GO:0003677 "DNA binding"
evidence=IDA;TAS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0008361 "regulation
of cell size" evidence=IMP] [GO:0009755 "hormone-mediated signaling
pathway" evidence=IMP] [GO:0010160 "formation of organ boundary"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0010093 "specification of floral organ identity"
evidence=IGI;RCA] [GO:0048440 "carpel development" evidence=RCA]
[GO:0009908 "flower development" evidence=IMP] InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0030154
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0008361 GO:GO:0042127 GO:GO:0009755
GO:GO:0010093 EMBL:AB025608 GO:GO:0010160 EMBL:U38946 EMBL:DQ056605
IPI:IPI00545967 PIR:S60325 RefSeq:NP_188954.1 UniGene:At.53448
PDB:1NJQ PDB:2L1O PDBsum:1NJQ PDBsum:2L1O ProteinModelPortal:Q38895
SMR:Q38895 STRING:Q38895 EnsemblPlants:AT3G23130.1 GeneID:821888
KEGG:ath:AT3G23130 TAIR:At3g23130 eggNOG:NOG276406
HOGENOM:HOG000240643 InParanoid:Q38895 OMA:HTPENAC PhylomeDB:Q38895
ProtClustDB:CLSN2913466 EvolutionaryTrace:Q38895
Genevestigator:Q38895 GermOnline:AT3G23130 Uniprot:Q38895
Length = 204
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 65/181 (35%), Positives = 85/181 (46%)
Query: 56 EDTGNIMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLXXXXXXXXXXXXXXT 115
+D ++G +WPPRSYTC+FC+REFRSAQALGGHMNVHRRDRARL
Sbjct: 32 QDHDYLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSST---- 87
Query: 116 LIIPTTQEFTANSGYCLLYQLPNPNGGVFASTTMTACAIDDSP----STLLSISP---YP 168
P+ N Y + P P+ T + SP + S+SP +
Sbjct: 88 ---PSPPYPNPNYSYSTMANSPPPHHSPL--TLFPTLSPPSSPRYRAGLIRSLSPKSKHT 142
Query: 169 PNN---------LIGLPPSTNFPVASQCYSTK-DPLGSINDNSNACNESAIEELDLELRL 218
P N L+ +T F C + D + S+ NES ++LDLELRL
Sbjct: 143 PENACKTKKSSLLVEAGEATRFTSKDACKILRNDEIISLELEIGLINESE-QDLDLELRL 201
Query: 219 G 219
G
Sbjct: 202 G 202
>TAIR|locus:2083574 [details] [associations]
symbol:TAC1 "AT3G09290" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IMP] [GO:0051973 "positive
regulation of telomerase activity" evidence=IGI] [GO:0006826 "iron
ion transport" evidence=RCA] [GO:0010043 "response to zinc ion"
evidence=RCA] [GO:0010106 "cellular response to iron ion
starvation" evidence=RCA] [GO:0010167 "response to nitrate"
evidence=RCA] [GO:0015706 "nitrate transport" evidence=RCA]
InterPro:IPR007087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 GO:GO:0051973 HSSP:Q38895 EMBL:AC011436
EMBL:AB493607 IPI:IPI00530736 RefSeq:NP_187540.1 UniGene:At.53228
ProteinModelPortal:Q9SR34 SMR:Q9SR34 PaxDb:Q9SR34 PRIDE:Q9SR34
EnsemblPlants:AT3G09290.1 GeneID:820085 KEGG:ath:AT3G09290
TAIR:At3g09290 eggNOG:NOG258357 HOGENOM:HOG000242276
InParanoid:Q9SR34 OMA:CSDSISK PhylomeDB:Q9SR34
ProtClustDB:CLSN2915675 Genevestigator:Q9SR34 Uniprot:Q9SR34
Length = 172
Score = 137 (53.3 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 24/32 (75%), Positives = 28/32 (87%)
Query: 69 RSYTCTFCRREFRSAQALGGHMNVHRRDRARL 100
RSY C+FC R F +AQALGGHMN+HRRDRA+L
Sbjct: 33 RSYVCSFCIRGFSNAQALGGHMNIHRRDRAKL 64
Score = 59 (25.8 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 13/22 (59%), Positives = 16/22 (72%)
Query: 199 DNSNACNESAIEELDLELRLGQ 220
D S++ + IE LDLELRLGQ
Sbjct: 143 DGSSSSHHRDIEVLDLELRLGQ 164
>TAIR|locus:2084390 [details] [associations]
symbol:AT3G53820 "AT3G53820" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008270 GO:GO:0003700
GO:GO:0003676 GO:GO:0005622 Gene3D:3.30.160.60 EMBL:AL132960
HSSP:Q38895 HOGENOM:HOG000242276 EMBL:DQ056622 EMBL:AB493650
IPI:IPI00544356 PIR:T45922 RefSeq:NP_190950.1 UniGene:At.53925
ProteinModelPortal:Q9M344 SMR:Q9M344 EnsemblPlants:AT3G53820.1
GeneID:824549 KEGG:ath:AT3G53820 TAIR:At3g53820 eggNOG:NOG331175
OMA:ICEFCER PhylomeDB:Q9M344 ProtClustDB:CLSN2915623
Genevestigator:Q9M344 Uniprot:Q9M344
Length = 142
Score = 129 (50.5 bits), Expect = 7.4e-12, Sum P(2) = 7.4e-12
Identities = 22/32 (68%), Positives = 26/32 (81%)
Query: 69 RSYTCTFCRREFRSAQALGGHMNVHRRDRARL 100
R Y C FC R F +AQALGGHMN+HR+DRA+L
Sbjct: 19 RPYICEFCERGFSNAQALGGHMNIHRKDRAKL 50
Score = 44 (20.5 bits), Expect = 7.4e-12, Sum P(2) = 7.4e-12
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 203 ACNESAIEELDLELRLGQRP 222
A ++SA + +DLELRLG P
Sbjct: 115 ALSQSA-DVIDLELRLGLDP 133
>TAIR|locus:2158367 [details] [associations]
symbol:AT5G43540 "AT5G43540" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008270 GO:GO:0003700
GO:GO:0003676 GO:GO:0005622 Gene3D:3.30.160.60 HSSP:Q38895
EMBL:AB016875 HOGENOM:HOG000242276 EMBL:AB493776 IPI:IPI00534827
RefSeq:NP_199167.1 UniGene:At.55339 ProteinModelPortal:Q9FIY6
SMR:Q9FIY6 EnsemblPlants:AT5G43540.1 GeneID:834374
KEGG:ath:AT5G43540 TAIR:At5g43540 eggNOG:NOG240103
InParanoid:Q9FIY6 OMA:MATRREN PhylomeDB:Q9FIY6
ProtClustDB:CLSN2916485 Genevestigator:Q9FIY6 Uniprot:Q9FIY6
Length = 137
Score = 130 (50.8 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 22/29 (75%), Positives = 25/29 (86%)
Query: 69 RSYTCTFCRREFRSAQALGGHMNVHRRDR 97
R Y CTFC+R F +AQALGGHMN+HRRDR
Sbjct: 33 RMYECTFCKRGFTNAQALGGHMNIHRRDR 61
Score = 41 (19.5 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 8/9 (88%), Positives = 9/9 (100%)
Query: 211 ELDLELRLG 219
E+DLELRLG
Sbjct: 128 EIDLELRLG 136
>TAIR|locus:2086193 [details] [associations]
symbol:URO "AT3G23140" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010252 "auxin homeostasis"
evidence=IMP] InterPro:IPR007087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0008270 GO:GO:0003700 GO:GO:0005622
HSSP:Q38895 EMBL:AB025608 GO:GO:0010252 EMBL:BT031382
IPI:IPI00545497 RefSeq:NP_188955.1 UniGene:At.50217
ProteinModelPortal:Q9LTD6 SMR:Q9LTD6 DNASU:821889
EnsemblPlants:AT3G23140.1 GeneID:821889 KEGG:ath:AT3G23140
TAIR:At3g23140 eggNOG:NOG315140 InParanoid:Q9LTD6 OMA:HRYLEYS
Genevestigator:Q9LTD6 Uniprot:Q9LTD6
Length = 172
Score = 109 (43.4 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 57 DTGNIMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRAR 99
D+G+ G R+Y C C+R F + QALGGH N+HRR+R R
Sbjct: 9 DSGSGSGEN--RRTYDCDICKRGFTNPQALGGHNNIHRRERER 49
Score = 37 (18.1 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 7/9 (77%), Positives = 9/9 (100%)
Query: 211 ELDLELRLG 219
+LDL+LRLG
Sbjct: 159 DLDLDLRLG 167
>TAIR|locus:2825107 [details] [associations]
symbol:ZFP7 "AT1G24625" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 GO:GO:0005622 EMBL:AC000103 EMBL:AC004133
HOGENOM:HOG000239894 EMBL:L39650 EMBL:BT005629 IPI:IPI00526425
PIR:S55887 RefSeq:NP_564223.1 UniGene:At.1644
ProteinModelPortal:Q39266 SMR:Q39266 IntAct:Q39266
EnsemblPlants:AT1G24625.1 GeneID:839077 KEGG:ath:AT1G24625
GeneFarm:5082 TAIR:At1g24625 eggNOG:NOG274767 OMA:KCEANPR
PhylomeDB:Q39266 ProtClustDB:CLSN2917048 Genevestigator:Q39266
GermOnline:AT1G24625 Uniprot:Q39266
Length = 209
Score = 116 (45.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 18/30 (60%), Positives = 25/30 (83%)
Query: 68 PRSYTCTFCRREFRSAQALGGHMNVHRRDR 97
PR ++C +CRR+F S+QALGGH N H+R+R
Sbjct: 56 PRVFSCNYCRRKFYSSQALGGHQNAHKRER 85
>TAIR|locus:2146960 [details] [associations]
symbol:ZFP3 "AT5G25160" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR007087 InterPro:IPR015880
PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0003700
GO:GO:0005622 EMBL:AC006259 HOGENOM:HOG000120101 EMBL:L39646
EMBL:BT008308 IPI:IPI00535019 PIR:S55883 RefSeq:NP_197898.1
UniGene:At.1642 ProteinModelPortal:Q39262 SMR:Q39262
EnsemblPlants:AT5G25160.1 GeneID:832587 KEGG:ath:AT5G25160
TAIR:At5g25160 eggNOG:NOG317027 InParanoid:Q39262 OMA:SASAFGH
PhylomeDB:Q39262 ProtClustDB:CLSN2686530 Genevestigator:Q39262
GermOnline:AT5G25160 Uniprot:Q39262
Length = 235
Score = 115 (45.5 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 27/70 (38%), Positives = 41/70 (58%)
Query: 36 LNQKREPQEDD---DSWEVRAF--AEDTGNIMG---TTWPPRSYTCTFCRREFRSAQALG 87
LNQ E +E D S E+ +DT +I+ T+ + ++C +C+R F S+QALG
Sbjct: 18 LNQSIEDEERDVHNSSHELNLIDCIDDTTSIVNESTTSTEQKLFSCNYCQRTFYSSQALG 77
Query: 88 GHMNVHRRDR 97
GH N H+R+R
Sbjct: 78 GHQNAHKRER 87
>TAIR|locus:2174547 [details] [associations]
symbol:ZFP2 "AT5G57520" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR007087 InterPro:IPR015880
PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0003700
GO:GO:0005622 EMBL:AB011482 EMBL:L39645 IPI:IPI00524683 PIR:S55882
RefSeq:NP_200560.1 UniGene:At.1641 ProteinModelPortal:Q39261
SMR:Q39261 PRIDE:Q39261 EnsemblPlants:AT5G57520.1 GeneID:835856
KEGG:ath:AT5G57520 TAIR:At5g57520 eggNOG:NOG310424
HOGENOM:HOG000240825 InParanoid:Q39261 OMA:LFRSSNT PhylomeDB:Q39261
ProtClustDB:CLSN2916820 Genevestigator:Q39261 GermOnline:AT5G57520
Uniprot:Q39261
Length = 150
Score = 105 (42.0 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 68 PRSYTCTFCRREFRSAQALGGHMNVHRRDR 97
PR ++C +C+R+F S+QALGGH N H+ +R
Sbjct: 49 PRVFSCNYCQRKFYSSQALGGHQNAHKLER 78
>TAIR|locus:2025777 [details] [associations]
symbol:ZFP1 "AT1G80730" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0009640 "photomorphogenesis" evidence=IEP] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR007087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0003700
GO:GO:0009640 GO:GO:0005622 EMBL:AC011713 EMBL:U53501 EMBL:L39644
IPI:IPI00544348 PIR:S55881 RefSeq:NP_178188.1 UniGene:At.64906
ProteinModelPortal:Q42485 SMR:Q42485 STRING:Q42485
EnsemblPlants:AT1G80730.1 GeneID:844412 KEGG:ath:AT1G80730
TAIR:At1g80730 eggNOG:NOG305514 HOGENOM:HOG000120101
InParanoid:Q42485 OMA:QAHSTIH PhylomeDB:Q42485
ProtClustDB:CLSN2914515 Genevestigator:Q42485 GermOnline:AT1G80730
Uniprot:Q42485
Length = 228
Score = 112 (44.5 bits), Expect = 0.00010, P = 0.00010
Identities = 17/30 (56%), Positives = 25/30 (83%)
Query: 68 PRSYTCTFCRREFRSAQALGGHMNVHRRDR 97
PR ++C +C+R+F S+QALGGH N H+R+R
Sbjct: 65 PRVFSCNYCQRKFYSSQALGGHQNAHKRER 94
>TAIR|locus:2019723 [details] [associations]
symbol:ZFP6 "AT1G67030" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0022626 "cytosolic ribosome"
evidence=IDA] [GO:0006826 "iron ion transport" evidence=RCA]
[GO:0010106 "cellular response to iron ion starvation"
evidence=RCA] [GO:0010167 "response to nitrate" evidence=RCA]
[GO:0015706 "nitrate transport" evidence=RCA] InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC007152 GO:GO:0022626 EMBL:L39649 EMBL:AY050387
EMBL:AY093800 IPI:IPI00539477 PIR:S55886 RefSeq:NP_176873.1
UniGene:At.22303 ProteinModelPortal:Q39265 SMR:Q39265 STRING:Q39265
EnsemblPlants:AT1G67030.1 GeneID:843022 KEGG:ath:AT1G67030
TAIR:At1g67030 eggNOG:NOG286673 HOGENOM:HOG000237466
InParanoid:Q39265 OMA:GGMESMA PhylomeDB:Q39265
ProtClustDB:CLSN2914390 Genevestigator:Q39265 GermOnline:AT1G67030
Uniprot:Q39265
Length = 197
Score = 104 (41.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 69 RSYTCTFCRREFRSAQALGGHMNVHRRDRARL 100
R Y C +C REF ++QALGGH N H+++R L
Sbjct: 39 RKYECQYCCREFANSQALGGHQNAHKKERQLL 70
Score = 35 (17.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 161 LLSISPYPPNNLIGLPPSTN 180
LLS P+PP +++ L PS++
Sbjct: 104 LLS-QPHPPPHMM-LSPSSS 121
>TAIR|locus:2181007 [details] [associations]
symbol:AT5G01860 "AT5G01860" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008270 GO:GO:0003700
GO:GO:0003676 GO:GO:0005622 Gene3D:3.30.160.60 EMBL:AL162351
HSSP:Q38895 IPI:IPI00533931 PIR:T48207 RefSeq:NP_195806.1
UniGene:At.54679 ProteinModelPortal:Q9LZW0 SMR:Q9LZW0
EnsemblPlants:AT5G01860.1 GeneID:831739 KEGG:ath:AT5G01860
TAIR:At5g01860 eggNOG:NOG270534 HOGENOM:HOG000153201
InParanoid:Q9LZW0 OMA:YNPNIAK PhylomeDB:Q9LZW0
ProtClustDB:CLSN2916662 Genevestigator:Q9LZW0 Uniprot:Q9LZW0
Length = 215
Score = 109 (43.4 bits), Expect = 0.00021, P = 0.00021
Identities = 16/30 (53%), Positives = 25/30 (83%)
Query: 69 RSYTCTFCRREFRSAQALGGHMNVHRRDRA 98
R + CTFC++EF ++QALGGH N H+++R+
Sbjct: 65 RVFACTFCKKEFSTSQALGGHQNAHKQERS 94
>TAIR|locus:2143300 [details] [associations]
symbol:AT5G27880 "AT5G27880" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
EMBL:CP002688 GO:GO:0008270 GO:GO:0003700 GO:GO:0003676
GO:GO:0005622 Gene3D:3.30.160.60 IPI:IPI00518425 RefSeq:NP_198140.1
UniGene:At.55045 ProteinModelPortal:F4K5Q7 SMR:F4K5Q7
EnsemblPlants:AT5G27880.1 GeneID:832851 KEGG:ath:AT5G27880
OMA:RRGREIM PhylomeDB:F4K5Q7 Uniprot:F4K5Q7
Length = 278
Score = 101 (40.6 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 66 WPPRS---YTCTFCRREFRSAQALGGHMNVHRRDR 97
+P +S YTC FC++ F ++QALGGH N H+++R
Sbjct: 72 YPSKSNKIYTCHFCKKGFSTSQALGGHQNAHKQER 106
Score = 42 (19.8 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 18/70 (25%), Positives = 27/70 (38%)
Query: 144 FASTTMTACAIDDSPSTLLSISP-YPPN--NLIGLPPSTNFPVASQCYSTKDPLGSINDN 200
F T T + P L S + YP N N++ PP ++S S + L N
Sbjct: 183 FTGNTSTNGSTSRVPDPLPSYNNLYPSNSRNVLPFPPPQTTKLSSNFVSQGNVLSEENFI 242
Query: 201 SNACNESAIE 210
S + +E
Sbjct: 243 SKIGTNNIVE 252
>TAIR|locus:2156529 [details] [associations]
symbol:LATE "LATE FLOWERING" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042752 "regulation of circadian rhythm" evidence=IMP]
[GO:0048579 "negative regulation of long-day photoperiodism,
flowering" evidence=IMP] InterPro:IPR007087 InterPro:IPR015880
PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008270 GO:GO:0003700
GO:GO:0042752 HSSP:Q38895 GO:GO:0048579 EMBL:AB012242
IPI:IPI00547911 RefSeq:NP_199700.1 UniGene:At.55441
ProteinModelPortal:Q9FKA9 SMR:Q9FKA9 PRIDE:Q9FKA9 DNASU:834947
EnsemblPlants:AT5G48890.1 GeneID:834947 KEGG:ath:AT5G48890
TAIR:At5g48890 eggNOG:NOG253820 HOGENOM:HOG000091039
InParanoid:Q9FKA9 OMA:PSKEANK PhylomeDB:Q9FKA9
ProtClustDB:CLSN2916460 Genevestigator:Q9FKA9 Uniprot:Q9FKA9
Length = 173
Score = 102 (41.0 bits), Expect = 0.00069, P = 0.00069
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 69 RSYTCTFCRREFRSAQALGGHMNVHRRDR 97
R + C FC R+F S+QALGGH N H+++R
Sbjct: 33 RIFPCLFCSRKFHSSQALGGHQNAHKKER 61
>TAIR|locus:2199367 [details] [associations]
symbol:AT1G68360 species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR007087 InterPro:IPR015880
PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0008270 GO:GO:0003700 GO:GO:0005622
EMBL:AC016447 HSSP:Q38895 HOGENOM:HOG000237466 EMBL:BT029451
EMBL:AB493526 IPI:IPI00520985 PIR:D96707 RefSeq:NP_177003.1
UniGene:At.66118 ProteinModelPortal:Q9C9H1 SMR:Q9C9H1 PRIDE:Q9C9H1
EnsemblPlants:AT1G68360.1 GeneID:843165 KEGG:ath:AT1G68360
TAIR:At1g68360 eggNOG:NOG303782 InParanoid:Q9C9H1 OMA:PAVFSYT
PhylomeDB:Q9C9H1 ProtClustDB:CLSN2717797 Genevestigator:Q9C9H1
Uniprot:Q9C9H1
Length = 244
Score = 106 (42.4 bits), Expect = 0.00070, P = 0.00070
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 69 RSYTCTFCRREFRSAQALGGHMNVHRRDRARL 100
R Y C +C REF ++QALGGH N H+++R +L
Sbjct: 71 RKYECQYCCREFGNSQALGGHQNAHKKERQQL 102
>TAIR|locus:2159088 [details] [associations]
symbol:KNU "AT5G14010" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009909 "regulation of flower
development" evidence=IMP] [GO:0010582 "floral meristem
determinacy" evidence=IMP] InterPro:IPR007087 InterPro:IPR015880
PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030154 GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 EMBL:AB005230
GO:GO:0010582 GO:GO:0009909 EMBL:AY612608 IPI:IPI00532685
RefSeq:NP_196905.1 UniGene:At.51248 ProteinModelPortal:Q9FFX4
SMR:Q9FFX4 STRING:Q9FFX4 EnsemblPlants:AT5G14010.1 GeneID:831249
KEGG:ath:AT5G14010 GeneFarm:3108 TAIR:At5g14010 eggNOG:NOG305534
HOGENOM:HOG000210017 InParanoid:Q9FFX4 OMA:PPILDDN PhylomeDB:Q9FFX4
ProtClustDB:CLSN2916692 Genevestigator:Q9FFX4 Uniprot:Q9FFX4
Length = 161
Score = 100 (40.3 bits), Expect = 0.00087, P = 0.00087
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 69 RSYTCTFCRREFRSAQALGGHMNVHRRDRA 98
R + C +C R+F ++QALGGH N H+R+RA
Sbjct: 36 RLFPCQYCPRKFYTSQALGGHQNAHKRERA 65
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.131 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 225 198 0.00083 111 3 11 22 0.38 33
31 0.45 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 607 (65 KB)
Total size of DFA: 184 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.30u 0.08s 19.38t Elapsed: 00:00:01
Total cpu time: 19.30u 0.08s 19.38t Elapsed: 00:00:01
Start: Sat May 11 12:45:43 2013 End: Sat May 11 12:45:44 2013