BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045335
(339 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2TAP9|ABHDB_XENLA Alpha/beta hydrolase domain-containing protein 11 OS=Xenopus laevis
GN=abhd11 PE=2 SV=1
Length = 312
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 131/307 (42%), Gaps = 59/307 (19%)
Query: 46 LAYDLIQGTLVRWSSMMDKSIPDPPTAVLLHGILGSRKNWGTFARRLARAYPTWQTCDVM 105
L+YDL G+++ P VLLHG+ GS+ N+ T AR L R
Sbjct: 50 LSYDLYDGSVLG------------PPLVLLHGLFGSKSNFQTIARALVRK------TGRK 91
Query: 106 VIPHQSRKGGLT------TVASTALDVLKLVAQLRITPRVLVGHSFGGKVVLSMVEQAAK 159
V+ +R G + T + + DV +++ QL+IT VL+GHS GGK +++ Q K
Sbjct: 92 VLTLDARNHGCSPHDDIMTYPAMSADVCQILHQLQITNCVLIGHSMGGKTAMTVALQEPK 151
Query: 160 PLARPVRVWVLDATPGKVRAGGDGEDHPAELIHFLSKLPKEVISK--QEVVNALIQQGFS 217
+ R V V + A P + G + +HF K+P+ + E +++ +++
Sbjct: 152 LVERLVSVDISPA-PTVPQTGFPHYIAAMQKVHFEEKMPRSTARRLADEQLSSTVKEA-- 208
Query: 218 KDVAQWVVTNLKPAASFGASSSFSWVFDLEGIAEMYQSYDETNLWKLVENLP------QG 271
+ Q+++TNL + +F W +LE I+ Q D + + E P G
Sbjct: 209 -SIRQFLLTNL-----VQENGTFKWRVNLEVISRHLQ--DLLDFPEFQEPYPGPVLFLGG 260
Query: 272 VHVNFLKAERSLHRWALEDIQRIHAAEELAVDGGGGVEMHVLEDAGHWVHADNPDGLFRI 331
+ ++ +E +I+R+ + G AGHWVHAD
Sbjct: 261 ANSPYISSEN------YPEIERLFPFANVEYIFG----------AGHWVHADKTHDFLNA 304
Query: 332 LTSSFEG 338
+ + E
Sbjct: 305 ICNFVES 311
>sp|Q0V9K2|ABHDB_XENTR Alpha/beta hydrolase domain-containing protein 11 OS=Xenopus
tropicalis GN=abhd11 PE=2 SV=2
Length = 319
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 124/277 (44%), Gaps = 48/277 (17%)
Query: 61 MMDKSIPDPPTAVLLHGILGSRKNWGTFARRLARAYP----TWQTCDVMVIPHQSRKGGL 116
+ D S P PP VLLHG+ GS+ N+ + AR L R T + PH +
Sbjct: 61 LYDGSAPGPPL-VLLHGLFGSKSNFQSIARALVRKTGRKVLTLDARNHGCSPHDD----I 115
Query: 117 TTVASTALDVLKLVAQLRITPRVLVGHSFGGKVVLSMVEQAAKPLARPVRVWVLDATPGK 176
T + + DV +++ +L+IT VL+GHS GGK +++ Q K + R V V D +P
Sbjct: 116 MTYPAMSADVCQILHKLQITSCVLIGHSMGGKTAMTVALQEPKLVERFVSV---DISPAA 172
Query: 177 V--RAGGDGEDHPAELIHFLSKLPKEVISK--QEVVNALIQQGFSKDVAQWVVTNLKPAA 232
+ G + +H K+P+ + +E +++ +++ + Q+++TNL
Sbjct: 173 TVPQTGFPHYIAAMQKVHLEGKIPRSTARRLAEEQLSSTVKEA---SIRQFLLTNL---- 225
Query: 233 SFGASSSFSWVFDLEGIAEMYQSYDETNLWKLVENLP------QGVHVNFLKAERSLHRW 286
+ +F W +LE I++ Q D + + E P G + ++ +E
Sbjct: 226 -VQENGTFKWRVNLEVISQHLQ--DLLDFPEFQEPYPGPALFLGGANSPYISSEN----- 277
Query: 287 ALEDIQRIHAAEELAVDGGGGVEMHVLEDAGHWVHAD 323
+I+R+ + G AGHWVHAD
Sbjct: 278 -YPEIERLFPCANVEYIFG----------AGHWVHAD 303
>sp|Q6DRD9|ABHDB_DANRE Alpha/beta hydrolase domain-containing protein 11 OS=Danio rerio
GN=abhd11 PE=2 SV=1
Length = 317
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 132/327 (40%), Gaps = 74/327 (22%)
Query: 30 ERLARVGKD---VAEPSGVLAYDLIQGTLVRWSSMMDKSIPDPPTAVLLHGILGSRKNWG 86
RL R G D A P L YD+ G D V LHG+ GS+ N+
Sbjct: 38 SRLDRAGSDSMRTASPVN-LTYDVFDGK------------GDSTPLVFLHGLFGSKSNFH 84
Query: 87 TFAR----RLARAYPTWQTCDVMVIPHQSRKGGLTTVASTALDVLKLVAQLRITPRVLVG 142
+ A+ R R T + PH + T + D+ L+ QL I VL+G
Sbjct: 85 SIAKSLVQRTGRKVLTIDARNHGKSPHSP----VLTYDTMTSDLTHLLGQLHIGKCVLIG 140
Query: 143 HSFGGKVVLSMVEQAAKPLARP---VRVWVLDATPGKVRAGGDGEDHPAEL--IHFLSKL 197
HS GGKV ++ L++P R+ V+D +P A + + + + S +
Sbjct: 141 HSMGGKVAMTTA------LSQPNLVERLVVVDISPSLTSAHTNFHAYIQAMKEVKIPSDI 194
Query: 198 PKEVISK--QEVVNALIQQGFSKDVAQWVVTNLKPAASFGASSSFSWVFDLEGIAEM--- 252
P+ + ++ + ++++ + V Q+++TNL+ + + W +LE I+
Sbjct: 195 PRSTARRLAEDQLRKIVKE---RSVRQFLLTNLEE-----QNGQYGWRINLESISNHLED 246
Query: 253 ---YQSYDETNLWKLVENLPQGVHVNFLKAERSLHRWA--LEDIQRIHAAEELAVDGGGG 307
+ +D T + FL S + + +IQR+
Sbjct: 247 ILGFPEFDTTYEGPTL----------FLGGSSSAYISSDDYPEIQRLFPC---------- 286
Query: 308 VEMHVLEDAGHWVHADNP-DGLFRILT 333
++ + DA HW+HAD P D + I+T
Sbjct: 287 ADIQYIPDASHWIHADKPLDFISSIIT 313
>sp|Q57427|Y193_HAEIN Putative esterase/lipase HI_0193 OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0193 PE=3 SV=1
Length = 287
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 123/289 (42%), Gaps = 45/289 (15%)
Query: 50 LIQGTLVRWSSMMDKSIPDPPTAVLLHGILGSRKNWGTFARRLARAYPTWQTCDVMVIPH 109
++ +L+ + K + P + +HG+ G N G AR + Y + D+ H
Sbjct: 27 IMAKSLLNYQFHQVKQTINTPVLIFIHGLFGDMDNLGVIARAFSEHYSILR-IDLRNHGH 85
Query: 110 --QSRKGGLTTVASTALDVLKLVAQLRITPRVLVGHSFGGKVVLSMVEQAAKPLARPVRV 167
S K +A DV+ ++ L ++ +L+GHS GGK + + + + + +
Sbjct: 86 SFHSEKMNYQLMAE---DVIAVIRHLNLSKVILIGHSMGGKTAMKITALCPELVEKLI-- 140
Query: 168 WVLDATPGKVRAGGDGEDHPAELIHFLSKLPKEVISKQEVVNALIQQGFSKDVAQWVVTN 227
V+D +P G +D L + P+ ++Q+ L Q+ +DV Q+++
Sbjct: 141 -VIDMSPMPYEGFGH-KDVFNGLFAVKNAKPE---NRQQAKPILKQEINDEDVVQFML-- 193
Query: 228 LKPAASFGASSSFSWVFDLEGIAEMYQSYDETNLWKLVENLP-----QGVHVNFLKAERS 282
SF +S+ + F+L ++ +Y W+ V +G + +++K E S
Sbjct: 194 ----KSFDVNSADCFRFNLTA---LFNNYANIMDWEKVRVFTPTLFIKGGNSSYIKIENS 246
Query: 283 LHRWALEDI-QRIHAAEELAVDGGGGVEMHVLEDAGHWVHADNPDGLFR 330
E I ++ A ++G +GHWVHA+ PD + R
Sbjct: 247 ------EKILEQFPNATAFTING-----------SGHWVHAEKPDFVIR 278
>sp|Q8NFV4|ABHDB_HUMAN Alpha/beta hydrolase domain-containing protein 11 OS=Homo sapiens
GN=ABHD11 PE=2 SV=1
Length = 315
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 110/267 (41%), Gaps = 41/267 (15%)
Query: 70 PTAVLLHGILGSRKNWGTFARRLARAYPTWQTCDVMVIPHQSRKGGLT------TVASTA 123
P V LHG+ GS+ N+ + A+ LA Q V+ +R G + + +
Sbjct: 67 PAVVFLHGLFGSKTNFNSIAKILA------QQTGRRVLTVDARNHGDSPHSPDMSYEIMS 120
Query: 124 LDVLKLVAQLRITPRVLVGHSFGGKVVLSMVEQAAKPLARPVRVWVLDATPGKVRAGGDG 183
D+ L+ QL + P V+VGHS GGK + + Q + + R + V D +P +
Sbjct: 121 QDLQDLLPQLGLVPCVVVGHSMGGKTAMLLALQRPELVERLIAV---DISPVESTGVSHF 177
Query: 184 EDHPAEL--IHFLSKLPKEVISK--QEVVNALIQQGFSKDVAQWVVTNLKPAASFGASSS 239
+ A + I+ +LP+ K E ++++IQ V Q ++TNL
Sbjct: 178 ATYVAAMRAINIADELPRSRARKLADEQLSSVIQ---DMAVRQHLLTNL-----VEVDGR 229
Query: 240 FSWVFDLEGIAEMYQSYDETNLWKLVENLPQGVHVNFLKAERSL-HRWALEDIQRIHAAE 298
F W +L+ + Q D+ + + G + L H +I R+
Sbjct: 230 FVWRVNLDALT---QHLDKILAFPQRQESYLGPTLFLLGGNSQFVHPSHHPEIMRLFPR- 285
Query: 299 ELAVDGGGGVEMHVLEDAGHWVHADNP 325
+M + +AGHW+HAD P
Sbjct: 286 ---------AQMQTVPNAGHWIHADRP 303
>sp|Q8K4F5|ABHDB_MOUSE Alpha/beta hydrolase domain-containing protein 11 OS=Mus musculus
GN=Abhd11 PE=2 SV=1
Length = 307
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 128/301 (42%), Gaps = 55/301 (18%)
Query: 46 LAYDLIQGTLVRWSSMMDKSIPDPPTAVLLHGILGSRKNWGTFAR----RLARAYPTWQT 101
L+Y+L+ G D ++P V LHG+ GS+ N+ + A+ R R T
Sbjct: 47 LSYNLLDG---------DATLP---AIVFLHGLFGSKTNFNSLAKAMVQRTGRRVLTVDA 94
Query: 102 CDVMVIPHQSRKGGLTTVASTALDVLKLVAQLRITPRVLVGHSFGGKVVLSMVEQAAKPL 161
+ PH + + + D+ L+ QL + P VLVGHS GGK + + Q +
Sbjct: 95 RNHGDSPHSPD----ASYEAMSQDLQGLLPQLGLVPCVLVGHSMGGKTAMLLALQRPDVV 150
Query: 162 ARPVRVWVLDATPGKVRAGGDGEDHPAELIHFLS--KLPKEVISKQ------EVVNALIQ 213
R V V+D +P G H I + ++P++V Q + ++++++
Sbjct: 151 ERLV---VVDISP----VGTTPGSHIGAFIAAMKAVEIPEKVPHSQARKLADKQLSSVVK 203
Query: 214 QGFSKDVAQWVVTNLKPAASFGASSSFSWVFDLEGIAEMYQSYDETNLWKLVENLPQGVH 273
+ + Q+++TNL FSW +L+ +A Q D+ + + P
Sbjct: 204 EA---GIRQFLLTNL-----VEVGGRFSWRLNLDTLA---QHLDKIMTFPQ-QREPYSGP 251
Query: 274 VNFLKAERSLHRWALEDIQRIHAAEELAVDGGGGVEMHVLEDAGHWVHADNPDGLFRILT 333
FL S + +Q H +E + ++ + +AGHWVH+D P +T
Sbjct: 252 TLFLLGGNSTY------VQPSHHSEIRRLFPQA--QIQTVPNAGHWVHSDKPQDFMDAVT 303
Query: 334 S 334
S
Sbjct: 304 S 304
>sp|Q3SZ73|ABHDB_BOVIN Alpha/beta hydrolase domain-containing protein 11 OS=Bos taurus
GN=ABHD11 PE=2 SV=1
Length = 303
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 112/268 (41%), Gaps = 43/268 (16%)
Query: 70 PTAVLLHGILGSRKNWGTFARRLARAYPTWQTCDVMVIPHQSRKGGLTT------VASTA 123
P V LHG+ GS+ N+ A+ LA Q V+ +R G ++ + +
Sbjct: 55 PALVFLHGLFGSKTNFNFVAKTLA------QQTGRRVLTVDARNHGESSHSPDMSYEAMS 108
Query: 124 LDVLKLVAQLRITPRVLVGHSFGGKVVLSMVEQAAKPLARPVRVWVLDATPGKVRAGGDG 183
D+ L+ L + P VL+GHS GG+ + + Q + + R + V D + + + +
Sbjct: 109 KDLQDLLPHLGLVPCVLIGHSMGGRTAMLLALQRPELVERLIAV---DISQVETTSSSNF 165
Query: 184 EDHPAEL----IHFLSKLPKEVISKQEVVNALIQQGFSKDVAQWVVTNLKPAASFGASSS 239
++ A + + + L E + ++IQ S + Q ++TNL
Sbjct: 166 PNYIAAMRAVDMANEASLSGARKLADERLRSVIQ---SASIRQLLLTNL-----VEVDGR 217
Query: 240 FSWVFDLEGIAEMYQSYDETNLWKLVENLPQGVHVNFLKAERS--LHRWALEDIQRIHAA 297
F W +L+ +A Q D+ + + G + FL+ S L +I+R+
Sbjct: 218 FVWRLNLDALA---QHLDKILDFPARQETYSGPTL-FLRGGNSQFLLPSHYPEIRRLFPR 273
Query: 298 EELAVDGGGGVEMHVLEDAGHWVHADNP 325
+M + +AGHWVH+D P
Sbjct: 274 ----------AQMQTVPNAGHWVHSDRP 291
>sp|P53219|IMO32_YEAST Abhydrolase domain-containing protein IMO32 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IMO32 PE=1
SV=1
Length = 342
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 95/219 (43%), Gaps = 41/219 (18%)
Query: 46 LAYDLIQGTLVRWSSMMDKSIPDPPTAVLLHGILGSRKNWGTFARRLARAYPTWQTCDVM 105
L+YD+I+ V+ D+ P PP ++LHG+ G++ N + R L + DV
Sbjct: 55 LSYDIIKRDAVKTG---DEGKPRPPI-IILHGLFGNKLNNRSIGRNLNKKLGR----DVY 106
Query: 106 VI--------PHQSRKGGLTTVASTALDVLKLVAQLRITPR---VLVGHSFGGKVVLSMV 154
++ PH S + + DV + + + +++GHS GGKV + +V
Sbjct: 107 LLDLRNHGSSPHSS----VHNYEVMSEDVKHFITKHELNTNGGPIIIGHSMGGKVAMMLV 162
Query: 155 EQAAKPLARPVRVWVLDATPGKVRAGGDGEDHPAELIHFLSKLPKEVISKQEVVNALIQQ 214
+ + + V ++ P +R AE + ++ L + V K + + L Q
Sbjct: 163 LKNPQLCSMLV---CIENAPVSLRPN-------AEFVEYIKALMEIVNDKGKTIRTLKQA 212
Query: 215 --------GFSKDVAQWVVTNLKPAASFGASSSFSWVFD 245
G ++ V ++++T LK +SS S+ F+
Sbjct: 213 DEHLAERIGGNELVRRFLLTALKKVKMDNSSSVSSYTFE 251
>sp|O94437|YFI3_SCHPO Abhydrolase domain-containing protein C22H12.03
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC22H12.03 PE=3 SV=1
Length = 270
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 117/268 (43%), Gaps = 43/268 (16%)
Query: 70 PTAVLLHGILGSRKNWGTFARRLARAYPTWQTCDVMVIPHQSRKGGLTTVA-----STAL 124
P ++ HG+LGS++NW R LA+ + D+ I Q G VA + AL
Sbjct: 21 PPVLIFHGLLGSKRNW----RSLAKKFSCKLDRDIYAI-DQRCHGDSPCVAPLSYSAMAL 75
Query: 125 DVLKLVAQLRITPRVLVGHSFGGKVVLSMVEQAAKPLARPVRVWVLDATPGKVRAGGDGE 184
D + + ++ ++GHS G K +MV P + ++ V+D +P +
Sbjct: 76 DAFQFMKDHKLDKASIIGHSMGAKT--AMVTALKWP-DKVEKLVVVDNSPW-------YQ 125
Query: 185 DHPAELIHFLSKL---PKEVISKQEVVNALIQQGFSKD--VAQWVVTNLKPAASFGASSS 239
D P + + K+ + I+K + ++ KD V ++++NLK + S++
Sbjct: 126 DLPRDYGAYFRKMIQIDEANITKYSEADKMMST-VEKDILVRSFLLSNLKKDS--NNSNT 182
Query: 240 FSWVFDLEGIAEMYQSYD--ETNLWKLVENLPQGVHVNFLKAERSLHRWALEDIQRIHAA 297
F + +E I++ ++ + +L LV + P V + LKA + AL ++
Sbjct: 183 FKFRVPIELISKSLKTIEGFPASLNDLVYDSPTLV-IRALKAP-FIPDSALPVFKKFFPK 240
Query: 298 EELAVDGGGGVEMHVLEDAGHWVHADNP 325
EL V D GHWVH + P
Sbjct: 241 YEL-----------VSLDCGHWVHFEKP 257
>sp|A6TBV7|MENH_KLEP7 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC
700721 / MGH 78578) GN=menH PE=3 SV=1
Length = 252
Score = 40.4 bits (93), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 13/103 (12%)
Query: 59 SSMMDKSIPDPPTAVLLHGILGSRKNWGTFARRLARAYPTWQTCDVMVIPHQSRKGGLTT 118
S+ +D P P V LHG G R W R++ A+P W + + H GG
Sbjct: 4 SAAVDNGQPGYPWLVFLHGFSGDRNEW----RKVGDAFPAWPRLYLDLPGH----GGSAD 55
Query: 119 VASTALDVLKLVAQ-----LRITPRVLVGHSFGGKVVLSMVEQ 156
+A + + Q I L+G+S GG+V ++ Q
Sbjct: 56 IAVQDFAGVNTLLQSTLNSYNIHKYWLIGYSLGGRVAMNFASQ 98
>sp|P75736|YBFF_ECOLI Esterase YbfF OS=Escherichia coli (strain K12) GN=ybfF PE=1 SV=1
Length = 254
Score = 39.7 bits (91), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 73 VLLHGILGSRKNWGTFARRLARAYPTWQTCDVMVIPHQSRKGGLT------TVASTALDV 126
VL+HG+ GS N G AR L D +I R GL+ + A D+
Sbjct: 20 VLVHGLFGSLDNLGVLARDL--------VNDHNIIQVDMRNHGLSPRDPVMNYPAMAQDL 71
Query: 127 LKLVAQLRITPRVLVGHSFGGKVVLSMVEQAAKPLARPVRV 167
+ + +I +GHS GGK V+++ A+ + + V +
Sbjct: 72 VDTLDAQQIDKATFIGHSMGGKAVMALTALASDRIDKLVAI 112
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 311 HVLEDAGHWVHADNPDGLFRIL 332
HV+ AGHWVHA+ PD + R +
Sbjct: 227 HVIAGAGHWVHAEKPDAVLRAI 248
>sp|Q06593|OPT2_YEAST Oligopeptide transporter 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=OPT2 PE=1 SV=1
Length = 877
Score = 37.0 bits (84), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 142 GHSFGGKVVLSMVEQAAKPLARPVRVWVLDATPGKVRAGGDGEDHPAELIHFLSKLPKEV 201
G+SFG +++ MV A P P+ + +L A + D ++ H+ K+P
Sbjct: 608 GYSFGLNLLIEMVMGYALP-GNPIAIMILKAFGYNIDGQADNYVSNLKIAHY-CKIPPMA 665
Query: 202 ISKQEVVNALIQQGFSKDVAQWVVTNLKPAASFGASSSFS 241
+ + + V IQ + V W ++N+K + ++ F+
Sbjct: 666 LFRGQCVIVFIQIFVNLGVLNWQISNIKDFCTPHQNAKFT 705
>sp|B5XNX1|MENH_KLEP3 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
OS=Klebsiella pneumoniae (strain 342) GN=menH PE=3 SV=1
Length = 252
Score = 35.8 bits (81), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 5/99 (5%)
Query: 59 SSMMDKSIPDPPTAVLLHGILGSRKNWGTFARRLARAYPTWQTCDVMVIPH-QSRKGGLT 117
S+ +D P V LHG G R W R + A+P W + + H S +
Sbjct: 4 SAAVDNGQSGYPWLVFLHGFSGDRDEW----REVGDAFPAWPRLYLDLPGHGGSADIAVQ 59
Query: 118 TVASTALDVLKLVAQLRITPRVLVGHSFGGKVVLSMVEQ 156
A +L + I L+G+S GG+V ++ Q
Sbjct: 60 DFAGVNTLLLATLNSYNILNYWLIGYSLGGRVAMNFACQ 98
>sp|P44611|Y282_HAEIN Putative acyl-CoA thioester hydrolase HI_0282 OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=HI_0282 PE=3 SV=1
Length = 247
Score = 35.4 bits (80), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 73 VLLHGILGSRKNWGTFARRLARAYPTWQTCDVMVIPH--QSRKGGLTTVASTALDVLKLV 130
+ LHG+LG++ +W +++ P + C + +P Q++ +T +A + + +
Sbjct: 5 IFLHGLLGTKNDW----QKVIENLPHF-NCIALDLPFHGQAKDLEVTNFEDSAEYLAQQI 59
Query: 131 -AQLRITPRVLVGHSFGGKVVLSMVEQA 157
+ ++ P LVG+S GG++ L QA
Sbjct: 60 KSAVKNGPYFLVGYSLGGRIALYYALQA 87
>sp|A8GGZ0|MENH_SERP5 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
OS=Serratia proteamaculans (strain 568) GN=menH PE=3
SV=1
Length = 255
Score = 35.0 bits (79), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 17/100 (17%)
Query: 59 SSMMDKSIPDPPTAVLLHGILGSRKNWGTFARRLARAYPTWQTCDVMVIPHQSRKGGLTT 118
+ ++ + D P + LHG+LG+ W A R P W + + + H G
Sbjct: 4 TKVLQQGEADRPWLIWLHGLLGNNNEWRVIASRC----PEWPSLAIDLPGH----GDSVA 55
Query: 119 VASTALDVLKLVAQLRITPRV-------LVGHSFGGKVVL 151
V T+ D + AQ+ T ++ LVG+S GG++ +
Sbjct: 56 VVCTSFD--DISAQISATLQMHGIERYWLVGYSLGGRIAM 93
>sp|Q7G192|ALDO2_ARATH Indole-3-acetaldehyde oxidase OS=Arabidopsis thaliana GN=AAO2 PE=1
SV=2
Length = 1321
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 16/116 (13%)
Query: 132 QLRITPRVLVGHSFGGKVVLSM-----VEQAAKPLARPVRVWVLDATPGKVRAGGDGEDH 186
+R+ R VG FGGK V SM AAK L RPVR +V T + GG H
Sbjct: 777 NIRVITR-RVGGGFGGKSVKSMPVATACALAAKKLQRPVRTYVNRKT-DMIMTGG---RH 831
Query: 187 PAELIHFLSKLPKEVISKQEVVNALIQQGFSKDVAQWVVTNLKPAASFGASSSFSW 242
P ++ + + I+ E + LI G S + ++ +NL G+ ++W
Sbjct: 832 PMKITYSVGFKSTGKITALE-LEILIDAGASYGFSMFIPSNL-----IGSLKKYNW 881
>sp|Q7G193|ALDO1_ARATH Indole-3-acetaldehyde oxidase OS=Arabidopsis thaliana GN=AAO1 PE=1
SV=2
Length = 1368
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 76/177 (42%), Gaps = 24/177 (13%)
Query: 76 HGILGSRKNWGT-----FARRLARAYPTWQTCDVMVIPHQSRKGGLTTVASTALDVLKLV 130
H ILGS+ ++G+ + A A P C V+ Q+ + T+A L V +
Sbjct: 762 HKILGSKISFGSQYFFYMETQTALAVPDEDNCMVVYSSTQTPEFVHQTIAG-CLGVPE-- 818
Query: 131 AQLRITPRVLVGHSFGGKVVLSM-----VEQAAKPLARPVRVWVLDATPGKVRAGGDGED 185
+R+ R VG FGGK V SM AA + RPVR +V T + GG
Sbjct: 819 NNVRVITR-RVGGGFGGKAVKSMPVAAACALAASKMQRPVRTYVNRKT-DMITTGG---R 873
Query: 186 HPAELIHFLSKLPKEVISKQEVVNALIQQGFSKDVAQWVVTNLKPAASFGASSSFSW 242
HP ++ + + I+ + V L+ G ++D++ L P GA + W
Sbjct: 874 HPMKVTYSVGFKSNGKITALD-VEVLLDAGLTEDISP-----LMPKGIQGALMKYDW 924
>sp|Q7G191|ALDO4_ARATH Benzaldehyde dehydrogenase (NAD(+)) OS=Arabidopsis thaliana GN=AAO4
PE=1 SV=2
Length = 1337
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 93 ARAYPTWQTCDVMVIPHQSRKGGLTTVASTALDVLKLVAQLRITPRVLVGHSFGGKVVLS 152
A A P C V+ Q+ + T +A T L + + +R+ R VG FGGK + S
Sbjct: 754 ALALPDEDNCLVVYSSTQAPEFTQTVIA-TCLGIPE--HNVRVITR-RVGGGFGGKAIKS 809
Query: 153 M-----VEQAAKPLARPVRVWVLDATPGKVRAGGDGEDHPAELIH 192
M AAK + RPVR++V T + AGG HP ++ +
Sbjct: 810 MPVATACALAAKKMQRPVRIYVNRKT-DMIMAGG---RHPLKITY 850
>sp|B9M1R2|PURA_GEOSF Adenylosuccinate synthetase OS=Geobacter sp. (strain FRC-32)
GN=purA PE=3 SV=1
Length = 431
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 9/79 (11%)
Query: 103 DVMVIPHQSRKGGLTTVASTALDVLKLVAQLRITPRVLVGHSFGGKVVLSM-----VEQA 157
D +VI + R GLT +A T LDVL ++I G+S+ GK + + + +
Sbjct: 312 DALVIKYAVRVNGLTGIALTKLDVLSDFETIKIC----TGYSYNGKFLSELPANLDIFEK 367
Query: 158 AKPLARPVRVWVLDATPGK 176
+P+ + W D T +
Sbjct: 368 CQPVYEEMPGWQTDITAAR 386
>sp|P26174|BCHO_RHOCA Magnesium-chelatase 30 kDa subunit OS=Rhodobacter capsulatus
GN=bchO PE=3 SV=1
Length = 284
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 41/107 (38%), Gaps = 14/107 (13%)
Query: 61 MMDKSIPDPPTAVLLHGILGSRKNWGTFARRLARAYPTWQTCDVMVIPHQSRKGGLTTVA 120
++D D P +LLHG+ G + P +++P G + A
Sbjct: 28 VIDTGPADGPVLLLLHGL-------GASGHSFRKMIPGLSARYRVIVPDLPGHGCSRSTA 80
Query: 121 ST-------ALDVLKLVAQLRITPRVLVGHSFGGKVVLSMVEQAAKP 160
A D+ KL L +TP ++GHS GG + L + P
Sbjct: 81 RNRFGLKPMAEDLWKLCQHLNVTPAAVIGHSAGGAIALQLALDTPVP 127
>sp|B5EZI7|MENH_SALA4 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
OS=Salmonella agona (strain SL483) GN=menH PE=3 SV=1
Length = 252
Score = 33.1 bits (74), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 11/94 (11%)
Query: 67 PDPPTAVLLHGILGSRKNWGTFARRLARAYPTWQTCDVMVIPHQSRKGGLTTVASTALDV 126
P P+ V LHG G + W + + + C + I G DV
Sbjct: 12 PGAPSLVFLHGFSGDCREWQSVGEQ-------FHGCSRLYIDLPGHGGSTAIPVGGFADV 64
Query: 127 LKLVAQLRITPRV----LVGHSFGGKVVLSMVEQ 156
++L+ I+ + LVG+S GG+V + Q
Sbjct: 65 IRLLRATLISYNILKFWLVGYSLGGRVAMMAACQ 98
>sp|Q747F9|PURA_GEOSL Adenylosuccinate synthetase OS=Geobacter sulfurreducens (strain
ATCC 51573 / DSM 12127 / PCA) GN=purA PE=3 SV=1
Length = 433
Score = 33.1 bits (74), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 103 DVMVIPHQSRKGGLTTVASTALDVLKLVAQLRITPRVLVGHSFGGKVVLSM-----VEQA 157
D MV+ + R GLT VA T LDVL T +V G++F GK + + V +
Sbjct: 312 DAMVVRYAVRVNGLTGVALTKLDVLNDFE----TIKVCTGYTFEGKPLADLPANLAVFEK 367
Query: 158 AKPLARPVRVWVLDAT 173
+P+ + W+ D +
Sbjct: 368 CEPVYEELPGWMSDIS 383
>sp|C5D9W9|PURA_GEOSW Adenylosuccinate synthetase OS=Geobacillus sp. (strain WCH70)
GN=purA PE=3 SV=1
Length = 428
Score = 32.7 bits (73), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Query: 66 IPDPPTAVLLHGILGSR-----KNWGTFARRLARAYPTWQTCDVMVIPHQSRKGGLTTVA 120
+ D P LH +G R + +GT R R W D +V+ H R G+T ++
Sbjct: 272 VGDGPFPTELHDEIGDRIREVGREYGTTTGRPRRV--GW--FDSVVVRHARRVSGITDLS 327
Query: 121 STALDVLKLVAQLRITPRVLVGHSFGGKVV 150
++DVL + L+I V + + GKV+
Sbjct: 328 LNSIDVLTGIETLKIC----VAYRYKGKVI 353
>sp|P23974|YTXM_BACSU Putative esterase YtxM OS=Bacillus subtilis (strain 168) GN=ytxM
PE=3 SV=2
Length = 274
Score = 32.7 bits (73), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 63/158 (39%), Gaps = 32/158 (20%)
Query: 73 VLLHGILGSRKNWGTFARRLARAYPTWQTCDVMVIPHQSR----KGGLTTVASTALDVLK 128
V LHG GS+++W TF L P + + + H G + D+ +
Sbjct: 28 VCLHGFTGSKQSW-TF---LDEMLPDSRLIKIDCLGHGETDAPLNGKRYSTTRQVSDLAE 83
Query: 129 LVAQLRITPRVLVGHSFGGKVVLSMVEQAAKPLARPVRVWVL---DATPGKVRAGGDGED 185
+ QL++ L+G+S GG++ S + P RV L TPG
Sbjct: 84 IFDQLKLHKVKLIGYSMGGRLAYSFA------MTYPERVSALVLESTTPG---------- 127
Query: 186 HPAELIHFLSKLPKEVISKQEVVNALIQQGFSKDVAQW 223
+ L + + ++ +++ + +++ G VA W
Sbjct: 128 -----LKTLGERRERIMRDRKLADFILRDGLEAFVAYW 160
>sp|P0CO63|PPME1_CRYNB Protein phosphatase methylesterase 1 OS=Cryptococcus neoformans
var. neoformans serotype D (strain B-3501A) GN=PPE1 PE=3
SV=1
Length = 422
Score = 32.3 bits (72), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 306 GGVEMHVLEDAGHWVHADNPDGLFRILTS 334
G ++ V+ D GH++H DNP GL L +
Sbjct: 359 GKFQLEVMSDVGHYLHEDNPAGLAATLIT 387
>sp|P0CO62|PPME1_CRYNJ Protein phosphatase methylesterase 1 OS=Cryptococcus neoformans
var. neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=PPE1 PE=3 SV=1
Length = 422
Score = 32.3 bits (72), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 306 GGVEMHVLEDAGHWVHADNPDGLFRILTS 334
G ++ V+ D GH++H DNP GL L +
Sbjct: 359 GKFQLEVMSDVGHYLHEDNPAGLAATLIT 387
>sp|O52866|HYES_CORS2 Soluble epoxide hydrolase OS=Corynebacterium sp. (strain C12) PE=1
SV=3
Length = 286
Score = 32.3 bits (72), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 4/108 (3%)
Query: 73 VLLHGILGSRKNWGTFARRLARAYPTWQTCDVMVIPHQSRKGGLTTVASTALDVLKLVAQ 132
VLLHG S W LA + T D+ + + + A DV +LV+
Sbjct: 29 VLLHGWPQSWYEWRNVIPALAEQF-TVIAPDLRGLGDSEKPMTGFDKRTMATDVRELVSH 87
Query: 133 LRITPRVLVGHSFGGKVVLSMVEQAAKPLARPVRVWVLDATPGKVRAG 180
L ++GH +GG V + R+++LD PG ++AG
Sbjct: 88 LGYDKVGVIGHDWGGSVAFYFAYDNRDLVE---RLFILDMIPGLIKAG 132
>sp|B4TPJ1|MENH_SALSV 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
OS=Salmonella schwarzengrund (strain CVM19633) GN=menH
PE=3 SV=1
Length = 252
Score = 32.0 bits (71), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 11/94 (11%)
Query: 67 PDPPTAVLLHGILGSRKNWGTFARRLARAYPTWQTCDVMVIPHQSRKGGLTTVASTALDV 126
P P+ V LHG G + W + + C + I G DV
Sbjct: 12 PGAPSLVFLHGFSGDCREWQPVGEQ-------FHGCSRLYIDLPGHGGSAAIPVGGFADV 64
Query: 127 LKLVAQLRITPRV----LVGHSFGGKVVLSMVEQ 156
++L+ I+ + LVG+S GG+V + Q
Sbjct: 65 IRLLRATLISYNILKFWLVGYSLGGRVAMMAACQ 98
>sp|C0Q060|MENH_SALPC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
OS=Salmonella paratyphi C (strain RKS4594) GN=menH PE=3
SV=1
Length = 252
Score = 32.0 bits (71), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 11/94 (11%)
Query: 67 PDPPTAVLLHGILGSRKNWGTFARRLARAYPTWQTCDVMVIPHQSRKGGLTTVASTALDV 126
P P+ V LHG G + W + + C + I G DV
Sbjct: 12 PGAPSLVFLHGFSGDCREWQPVGEQ-------FHGCSRLYIDLPGHGGSAAIPVGRFADV 64
Query: 127 LKLVAQLRITPRV----LVGHSFGGKVVLSMVEQ 156
++L+ I+ + LVG+S GG+V + Q
Sbjct: 65 IRLLRATLISYNILKFWLVGYSLGGRVAMMAACQ 98
>sp|B5RCD3|MENH_SALG2 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
OS=Salmonella gallinarum (strain 287/91 / NCTC 13346)
GN=menH PE=3 SV=1
Length = 252
Score = 32.0 bits (71), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 11/94 (11%)
Query: 67 PDPPTAVLLHGILGSRKNWGTFARRLARAYPTWQTCDVMVIPHQSRKGGLTTVASTALDV 126
P P+ V LHG G + W + + C + I G DV
Sbjct: 12 PGAPSLVFLHGFSGDCREWQPVGEQ-------FHGCSRLYIDLPGHGGSAAIPVGGFADV 64
Query: 127 LKLVAQLRITPRV----LVGHSFGGKVVLSMVEQ 156
++L+ I+ + LVG+S GG+V + Q
Sbjct: 65 IRLLRATLISYNILKFWLVGYSLGGRVAMMAACQ 98
>sp|B5R2Y9|MENH_SALEP 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
OS=Salmonella enteritidis PT4 (strain P125109) GN=menH
PE=3 SV=1
Length = 252
Score = 32.0 bits (71), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 11/94 (11%)
Query: 67 PDPPTAVLLHGILGSRKNWGTFARRLARAYPTWQTCDVMVIPHQSRKGGLTTVASTALDV 126
P P+ V LHG G + W + + C + I G DV
Sbjct: 12 PGAPSLVFLHGFSGDCREWQPVGEQ-------FHGCSRLYIDLPGHGGSAAIPVGGFADV 64
Query: 127 LKLVAQLRITPRV----LVGHSFGGKVVLSMVEQ 156
++L+ I+ + LVG+S GG+V + Q
Sbjct: 65 IRLLRATLISYNILKFWLVGYSLGGRVAMMAACQ 98
>sp|Q57M48|MENH_SALCH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
OS=Salmonella choleraesuis (strain SC-B67) GN=menH PE=3
SV=1
Length = 252
Score = 32.0 bits (71), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 11/94 (11%)
Query: 67 PDPPTAVLLHGILGSRKNWGTFARRLARAYPTWQTCDVMVIPHQSRKGGLTTVASTALDV 126
P P+ V LHG G + W + + C + I G DV
Sbjct: 12 PGAPSLVFLHGFSGDCREWQPVGEQ-------FHGCSRLYIDLPGHGGSAAIPVGRFADV 64
Query: 127 LKLVAQLRITPRV----LVGHSFGGKVVLSMVEQ 156
++L+ I+ + LVG+S GG+V + Q
Sbjct: 65 IRLLRATLISYNILKFWLVGYSLGGRVAMMAACQ 98
>sp|B5BCN7|MENH_SALPK 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
OS=Salmonella paratyphi A (strain AKU_12601) GN=menH
PE=3 SV=1
Length = 252
Score = 32.0 bits (71), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 11/94 (11%)
Query: 67 PDPPTAVLLHGILGSRKNWGTFARRLARAYPTWQTCDVMVIPHQSRKGGLTTVASTALDV 126
P P+ V LHG G + W + + C + I G DV
Sbjct: 12 PGAPSLVFLHGFSGDCREWQPVGEQ-------FHGCSRLYIDLPGHGGSAAIPVGGFADV 64
Query: 127 LKLVAQLRITPRV----LVGHSFGGKVVLSMVEQ 156
++L+ I+ + LVG+S GG+V + Q
Sbjct: 65 IRLLRATLISYNILKFWLVGYSLGGRVAMMAACQ 98
>sp|Q5PN75|MENH_SALPA 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42)
GN=menH PE=3 SV=1
Length = 252
Score = 32.0 bits (71), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 11/94 (11%)
Query: 67 PDPPTAVLLHGILGSRKNWGTFARRLARAYPTWQTCDVMVIPHQSRKGGLTTVASTALDV 126
P P+ V LHG G + W + + C + I G DV
Sbjct: 12 PGAPSLVFLHGFSGDCREWQPVGEQ-------FHGCSRLYIDLPGHGGSAAIPVGGFADV 64
Query: 127 LKLVAQLRITPRV----LVGHSFGGKVVLSMVEQ 156
++L+ I+ + LVG+S GG+V + Q
Sbjct: 65 IRLLRATLISYNILKFWLVGYSLGGRVAMMAACQ 98
>sp|B4TBH5|MENH_SALHS 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
OS=Salmonella heidelberg (strain SL476) GN=menH PE=3
SV=1
Length = 252
Score = 32.0 bits (71), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 11/94 (11%)
Query: 67 PDPPTAVLLHGILGSRKNWGTFARRLARAYPTWQTCDVMVIPHQSRKGGLTTVASTALDV 126
P P+ V LHG G + W + + C + I G DV
Sbjct: 12 PGAPSLVFLHGFSGDCREWQPVGEQ-------FHGCSRLYIDLPGHGGSTAIPVGGFADV 64
Query: 127 LKLVAQLRITPRV----LVGHSFGGKVVLSMVEQ 156
++L+ I+ + LVG+S GG+V + Q
Sbjct: 65 IRLLRATLISYNILKFWLVGYSLGGRVAMMAACQ 98
>sp|B5ZAH6|RF1_UREU1 Peptide chain release factor 1 OS=Ureaplasma urealyticum serovar 10
(strain ATCC 33699 / Western) GN=prfA PE=3 SV=1
Length = 359
Score = 32.0 bits (71), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 27/91 (29%)
Query: 224 VVTNLKPAASFGASSSF-SWVFDLEGIAEMYQSYDETNLWKL--VENLPQGVHVNF---- 276
V+ ++PAA SS F +FD Y++Y E+N WK+ +E P V +F
Sbjct: 114 VIVEMRPAAGGDESSIFVGNLFD------TYRAYTESNNWKMKIIEMTPNAVGFSFISFM 167
Query: 277 ---------LKAERSLHRWALEDIQRIHAAE 298
+K E +HR +QR+ A E
Sbjct: 168 ISGEEVYSRMKFESGVHR-----VQRVPATE 193
>sp|P0A573|Y2734_MYCBO Uncharacterized protein Mb2734 OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=Mb2734 PE=3 SV=1
Length = 341
Score = 32.0 bits (71), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 70 PTAVLLHGILGSRKNWGTFARRLARAYPTWQTCDVMVIPHQSRKGGLTTVASTALDVLKL 129
P +L+HGI + W +LA+ + T D++ + +VA+ A + L
Sbjct: 38 PAILLIHGIGDNSTTWNGVHAKLAQRF-TVIAPDLLGHGQSDKPRADYSVAAYANGMRDL 96
Query: 130 VAQLRITPRVLVGHSFGGKVVLSMVEQ 156
++ L I +VGHS GG V + Q
Sbjct: 97 LSVLDIERVTIVGHSLGGGVAMQFAYQ 123
>sp|P0A572|Y2715_MYCTU Uncharacterized protein Rv2715/MT2788 OS=Mycobacterium tuberculosis
GN=Rv2715 PE=3 SV=1
Length = 341
Score = 32.0 bits (71), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 70 PTAVLLHGILGSRKNWGTFARRLARAYPTWQTCDVMVIPHQSRKGGLTTVASTALDVLKL 129
P +L+HGI + W +LA+ + T D++ + +VA+ A + L
Sbjct: 38 PAILLIHGIGDNSTTWNGVHAKLAQRF-TVIAPDLLGHGQSDKPRADYSVAAYANGMRDL 96
Query: 130 VAQLRITPRVLVGHSFGGKVVLSMVEQ 156
++ L I +VGHS GG V + Q
Sbjct: 97 LSVLDIERVTIVGHSLGGGVAMQFAYQ 123
>sp|Q8EKX9|PURA_OCEIH Adenylosuccinate synthetase OS=Oceanobacillus iheyensis (strain DSM
14371 / JCM 11309 / KCTC 3954 / HTE831) GN=purA PE=3
SV=1
Length = 429
Score = 32.0 bits (71), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 23/144 (15%)
Query: 66 IPDPPTAVLLHGILGSR-----KNWGTFARRLARAYPTWQTCDVMVIPHQSRKGGLTTVA 120
+ D P LH +G++ + +GT R R W D +V+ H R G+T ++
Sbjct: 272 VGDGPFPTELHDEIGNQIREVGREYGTTTGRARRV--GW--FDSVVVRHARRVSGITDLS 327
Query: 121 STALDVLKLVAQLRITPRVLVGHSFGGKVVLSM-----VEQAAKPLARPVRVWVLDATPG 175
++DVL + L+I V + + G+++ V +P+ + W D T
Sbjct: 328 LNSIDVLTGIETLKI----CVAYRYKGEIMKEFPASLKVLAECEPVYEEMPGWQEDITGA 383
Query: 176 KVRAGGDGEDHPAELIHFLSKLPK 199
K +D P H+L ++ +
Sbjct: 384 KSL-----DDLPENARHYLERVSQ 402
>sp|A9N5A3|MENH_SALPB 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
GN=menH PE=3 SV=1
Length = 252
Score = 32.0 bits (71), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 11/94 (11%)
Query: 67 PDPPTAVLLHGILGSRKNWGTFARRLARAYPTWQTCDVMVIPHQSRKGGLTTVASTALDV 126
P P+ V LHG G + W + + C + I G DV
Sbjct: 12 PGAPSLVFLHGFSGDCREWQPVGEQ-------FHGCSRLYIDLPGHGGSAAIPVGGFADV 64
Query: 127 LKLVAQLRITPRV----LVGHSFGGKVVLSMVEQ 156
++L+ I+ + LVG+S GG+V + Q
Sbjct: 65 IRLLRATLISYNILKFWLVGYSLGGRVAMMAACQ 98
>sp|B4SYY0|MENH_SALNS 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
OS=Salmonella newport (strain SL254) GN=menH PE=3 SV=1
Length = 252
Score = 32.0 bits (71), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 11/94 (11%)
Query: 67 PDPPTAVLLHGILGSRKNWGTFARRLARAYPTWQTCDVMVIPHQSRKGGLTTVASTALDV 126
P P+ V LHG G + W + + C + I G DV
Sbjct: 12 PGTPSLVFLHGFSGDCREWQPVGEQ-------FHGCSRLYIDLPGHGGSAAIPVGGFADV 64
Query: 127 LKLVAQLRITPRV----LVGHSFGGKVVLSMVEQ 156
++L+ I+ + LVG+S GG+V + Q
Sbjct: 65 IRLLRATLISYNILKFWLVGYSLGGRVAMMAACQ 98
>sp|Q5KU76|PURA_GEOKA Adenylosuccinate synthetase OS=Geobacillus kaustophilus (strain
HTA426) GN=purA PE=3 SV=1
Length = 428
Score = 32.0 bits (71), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 61/156 (39%), Gaps = 33/156 (21%)
Query: 66 IPDPPTAVLLHGILGSR-----KNWGTFARRLARAYPTWQTCDVMVIPHQSRKGGLTTVA 120
+ D P LH +G R + +GT R R W D +V+ H R G+T ++
Sbjct: 272 VGDGPFPTELHDEIGDRIREVGREYGTTTGRPRRV--GW--FDSVVVRHARRVSGITDLS 327
Query: 121 STALDVLKLVAQLRITPRVLVGHSFGGKVVLSM-----VEQAAKPLARPVRVWV------ 169
++DVL + L+I V + + G+V+ V +P+ + W
Sbjct: 328 LNSIDVLTGIETLKIC----VAYRYRGQVLEEFPASLKVLAECEPIYEELPGWTEDITGV 383
Query: 170 --LDATPGKVRAGGDGEDHPAELIHFLSKLPKEVIS 203
LD P R H E I L+ +P + S
Sbjct: 384 KSLDELPANAR-------HYVERISQLTGIPLSIFS 412
>sp|Q8CJE2|PER3_RAT Period circadian protein homolog 3 OS=Rattus norvegicus GN=Per3 PE=2
SV=1
Length = 1119
Score = 32.0 bits (71), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 24/41 (58%)
Query: 258 ETNLWKLVENLPQGVHVNFLKAERSLHRWALEDIQRIHAAE 298
E ++W+++E PQ V + + ER ED++++H+ E
Sbjct: 1015 EESIWRMIERTPQCVLMTYQVPERGRDTVLREDLEKLHSME 1055
>sp|B8D1A3|PURA_HALOH Adenylosuccinate synthetase OS=Halothermothrix orenii (strain H 168
/ OCM 544 / DSM 9562) GN=purA PE=3 SV=1
Length = 428
Score = 31.6 bits (70), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 24/125 (19%)
Query: 103 DVMVIPHQSRKGGLTTVASTALDVLKLVAQLRITPRVLVGHSFGGKVVLSM-----VEQA 157
D+ ++ H R GLT +A T LDVL + ++ +V G+ +G +++ +
Sbjct: 310 DIPILKHAVRVNGLTELALTKLDVLSGLREV----KVCTGYRYGDRLIEEFPGNIDILSG 365
Query: 158 AKPLARPVRVWVLDATPGKVRAGGDGEDHP---AELIHFLSKLP----------KEVISK 204
+P+ + W D T VR GD ++ +LI + K+P KE I +
Sbjct: 366 CEPVYEVLPGWDDDIT--GVREYGDLPENARRYVKLIEDMVKVPVTIIGVGPGRKEAIRR 423
Query: 205 QEVVN 209
++ VN
Sbjct: 424 EKEVN 428
>sp|A9HLQ1|PURA_GLUDA Adenylosuccinate synthetase OS=Gluconacetobacter diazotrophicus
(strain ATCC 49037 / DSM 5601 / PAl5) GN=purA PE=3 SV=1
Length = 429
Score = 31.6 bits (70), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 14/104 (13%)
Query: 103 DVMVIPHQSRKGGLTTVASTALDVLKLVAQLRITPRVLVGHSFGGKVVLSMVEQAA---- 158
D M++ R GG+ +A T LDVL + ++ RV VG+ G+ + S A
Sbjct: 310 DAMLVRRAVRVGGVNGLALTKLDVLDGLPEI----RVCVGYELDGQEIRSFPSSPAAQAR 365
Query: 159 -KPLARPVRVWVLDATPGKVRAGGDGEDHPAELIHFLSKLPKEV 201
KP+ + W D T G D PA+ I ++ ++ + V
Sbjct: 366 VKPIYETMEGWT-DTTYGARSWA----DLPAQAIKYVRRIEELV 404
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 128,693,254
Number of Sequences: 539616
Number of extensions: 5345288
Number of successful extensions: 14351
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 14307
Number of HSP's gapped (non-prelim): 85
length of query: 339
length of database: 191,569,459
effective HSP length: 118
effective length of query: 221
effective length of database: 127,894,771
effective search space: 28264744391
effective search space used: 28264744391
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)