BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 045342
         (243 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9C7A2|Y3236_ARATH Ankyrin repeat-containing protein At3g12360 OS=Arabidopsis thaliana
           GN=At3g12360 PE=2 SV=1
          Length = 590

 Score = 47.8 bits (112), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 83/174 (47%), Gaps = 27/174 (15%)

Query: 32  THLRIMLGVALKMQREVEKLVHHFLKKVQNIDGKTAQDIFIEQHKDFLENSEKWMKYTSN 91
           T ++  + + L+  +   K VH+  K+++ +            H++ + N+       +N
Sbjct: 380 TQIKNDVHIQLEQTKRTNKNVHNISKELRKL------------HREGINNA-------TN 420

Query: 92  SCMVVTALIATMMFATACTVPGGNIESGNPIFLRDKLFMVFAISYALGFIFTSTPLLVFV 151
           S  VV  L AT+ FA   TVPGG+   G+ + +    F +F I  AL    +   ++V +
Sbjct: 421 SVTVVAVLFATVAFAAIFTVPGGDNNDGSAVVVGRASFKIFFIFNALALFTSLAVVVVQI 480

Query: 152 SIQIAQYAEKDYFVESLQKKLIIGLASLFISSIVNMMISFVATFSIVLHDRSKW 205
           ++   +   +   VE + K  ++ LAS+  S      ++F+A+  IV+  +++W
Sbjct: 481 TLVRGETKAEKRVVEVINK--LMWLASMCTS------VAFLASSYIVVGRKNEW 526


>sp|Q9LX51|FBL64_ARATH F-box/LRR-repeat protein At3g59200 OS=Arabidopsis thaliana
           GN=At3g59200 PE=2 SV=1
          Length = 520

 Score = 32.7 bits (73), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 14/42 (33%), Positives = 27/42 (64%)

Query: 156 AQYAEKDYFVESLQKKLIIGLASLFISSIVNMMISFVATFSI 197
           A ++E+DYF E  +KK ++G A+ F+  I  + I +++  +I
Sbjct: 275 ADFSEEDYFSEGDEKKQMVGNATDFLKGISTVQILYLSAQAI 316


>sp|A8PRN6|CHO2_MALGO Phosphatidylethanolamine N-methyltransferase OS=Malassezia globosa
           (strain ATCC MYA-4612 / CBS 7966) GN=CHO2 PE=3 SV=1
          Length = 970

 Score = 32.7 bits (73), Expect = 2.6,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 38  LGVALKMQREVEKLVHHFLKKVQNIDGKTA-QDIFIEQHKDFLENSEKWMKYTSNSCMVV 96
           LG AL+ Q E   +VHHFLK     DG+ A  + F   H   + N+   M Y S + + +
Sbjct: 467 LGFALRWQSEERWIVHHFLKHYHFADGQAAVTESF--SHWKTIYNTSLIMTYVSFALLAI 524


>sp|Q17819|ORN_CAEEL Probable oligoribonuclease OS=Caenorhabditis elegans GN=C08B6.8
           PE=3 SV=1
          Length = 193

 Score = 32.3 bits (72), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 12/76 (15%)

Query: 66  TAQDIFIEQHKDFLENSEKWMKYTSNSCMVVTALIAT-----------MMFATACTVPGG 114
           T  DI I Q K+ L+N E+W + T +   ++  +IA+           + F     +PG 
Sbjct: 49  TGPDIVIHQPKEVLDNMEEWPRNTFHENGLMEKIIASKYSMADAENEVIDFLKLHALPGK 108

Query: 115 NIESGNPIFLRDKLFM 130
           +  +GN I++ D+LF+
Sbjct: 109 SPIAGNSIYM-DRLFI 123


>sp|Q6YR34|SYI_ONYPE Isoleucine--tRNA ligase OS=Onion yellows phytoplasma (strain OY-M)
           GN=ileS PE=3 SV=1
          Length = 900

 Score = 32.3 bits (72), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 5/61 (8%)

Query: 141 IFTSTPLLVFVSIQIAQYAEKDY-FVESLQKKLIIGLASL-FISSIV---NMMISFVATF 195
           I+T+TP  +  ++ IA + EK+Y  +E LQK+ ++G  ++ F+  +       I  VATF
Sbjct: 228 IWTTTPWTLPANVAIAVHPEKEYQLIEVLQKRYLVGTKNIPFLQKVFAWNKENIKVVATF 287

Query: 196 S 196
            
Sbjct: 288 E 288


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.327    0.138    0.401 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,145,109
Number of Sequences: 539616
Number of extensions: 2964516
Number of successful extensions: 11113
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 11107
Number of HSP's gapped (non-prelim): 21
length of query: 243
length of database: 191,569,459
effective HSP length: 114
effective length of query: 129
effective length of database: 130,053,235
effective search space: 16776867315
effective search space used: 16776867315
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 59 (27.3 bits)