Query 045342
Match_columns 243
No_of_seqs 148 out of 500
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 21:46:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045342.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045342hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n0q_A 3ANK, 3 ankyrin repeats 97.4 0.00011 3.7E-09 52.6 3.5 59 2-74 16-78 (93)
2 4gpm_A Engineered protein OR26 97.3 0.00013 4.5E-09 59.3 3.5 49 11-74 97-146 (169)
3 3twr_A Tankyrase-2; ankyrin re 97.1 0.00019 6.6E-09 56.0 2.3 21 11-32 69-89 (165)
4 1bd8_A P19INK4D CDK4/6 inhibit 97.1 0.00034 1.2E-08 54.0 3.5 20 55-74 124-143 (156)
5 3aaa_C Myotrophin, protein V-1 97.1 0.00033 1.1E-08 52.4 3.2 16 57-72 99-114 (123)
6 3t8k_A Uncharacterized protein 97.0 0.00081 2.8E-08 55.3 5.5 34 54-87 144-178 (186)
7 1s70_B 130 kDa myosin-binding 97.0 0.00027 9.1E-09 60.2 2.3 62 3-78 214-279 (299)
8 2zgd_A 3 repeat synthetic anky 96.9 0.00064 2.2E-08 50.4 3.7 58 3-74 39-100 (110)
9 1dcq_A PYK2-associated protein 96.9 0.00051 1.8E-08 59.9 3.4 49 11-74 199-248 (278)
10 1oy3_D Transcription factor in 96.9 0.00029 9.9E-09 59.0 1.7 29 3-32 173-206 (282)
11 3v31_A Ankyrin repeat family A 96.9 0.00091 3.1E-08 52.2 4.3 22 57-78 128-150 (167)
12 3utm_A Tankyrase-1; tankyrase, 96.8 0.00054 1.8E-08 58.9 2.9 21 11-32 241-261 (351)
13 2jab_A H10-2-G3; HER2, darpin, 96.8 0.0008 2.7E-08 51.3 3.5 29 3-32 29-61 (136)
14 2b0o_E UPLC1; arfgap, structur 96.8 0.0012 4E-08 58.4 4.9 58 3-74 208-269 (301)
15 1ihb_A P18-INK4C(INK6), cyclin 96.8 0.00077 2.6E-08 52.1 3.2 18 57-74 130-147 (162)
16 4hbd_A KN motif and ankyrin re 96.8 0.00082 2.8E-08 57.9 3.6 49 11-74 210-260 (276)
17 2rfa_A Transient receptor pote 96.7 0.0017 5.8E-08 53.2 5.2 69 2-74 135-207 (232)
18 3jxi_A Vanilloid receptor-rela 96.7 0.0031 1E-07 52.6 6.9 72 2-74 154-235 (260)
19 3aaa_C Myotrophin, protein V-1 96.7 0.0012 4E-08 49.3 3.8 59 2-74 21-83 (123)
20 3b7b_A Euchromatic histone-lys 96.7 0.0015 5.2E-08 53.5 4.8 19 57-75 203-221 (237)
21 3c5r_A BARD-1, BRCA1-associate 96.7 0.00054 1.9E-08 52.0 1.7 62 11-73 37-118 (137)
22 1d9s_A Cyclin-dependent kinase 96.7 0.001 3.4E-08 50.7 3.1 18 57-74 104-121 (136)
23 3f6q_A Integrin-linked protein 96.6 0.0009 3.1E-08 53.1 2.9 21 11-32 66-86 (179)
24 4b93_B Ankyrin repeat domain-c 96.6 0.00073 2.5E-08 58.4 2.5 62 11-73 146-227 (269)
25 3v30_A DNA-binding protein rfx 96.6 0.0031 1.1E-07 49.3 5.9 18 57-74 128-145 (172)
26 3aji_A 26S proteasome non-ATPa 96.6 0.0012 4E-08 54.0 3.4 17 57-73 198-214 (231)
27 1awc_B Protein (GA binding pro 96.6 0.0015 5.2E-08 50.4 3.8 21 11-32 61-81 (153)
28 2etb_A Transient receptor pote 96.6 0.0035 1.2E-07 52.3 6.3 72 2-74 150-231 (256)
29 3deo_A Signal recognition part 96.6 0.0014 4.8E-08 52.5 3.5 17 57-73 136-152 (183)
30 2dzn_A Probable 26S proteasome 96.6 0.00097 3.3E-08 54.2 2.5 18 56-73 200-217 (228)
31 2rfm_A Putative ankyrin repeat 96.5 0.0019 6.4E-08 51.7 4.0 21 11-32 95-115 (192)
32 1yyh_A HN1;, notch 1, ankyrin 96.5 0.002 6.9E-08 54.0 4.3 29 3-32 139-171 (253)
33 2l6b_A NR1C; ankyrin, consensu 96.5 0.0018 6.3E-08 47.5 3.3 58 3-74 24-85 (115)
34 1n0r_A 4ANK, 4 ankyrin repeats 96.4 0.0021 7.2E-08 47.0 3.5 18 57-74 94-111 (126)
35 3lvq_E ARF-GAP with SH3 domain 96.3 0.0017 6E-08 60.9 3.1 58 3-74 189-250 (497)
36 3ehr_A Osteoclast-stimulating 96.3 0.002 6.9E-08 52.8 2.9 18 56-73 165-182 (222)
37 1bd8_A P19INK4D CDK4/6 inhibit 96.3 0.003 1E-07 48.5 3.6 48 11-73 62-110 (156)
38 1sw6_A Regulatory protein SWI6 96.3 0.0015 5E-08 57.7 2.1 49 10-72 276-324 (327)
39 2jab_A H10-2-G3; HER2, darpin, 96.2 0.0032 1.1E-07 47.8 3.5 49 11-73 74-122 (136)
40 1wdy_A 2-5A-dependent ribonucl 96.2 0.0032 1.1E-07 52.2 3.8 19 56-74 245-263 (285)
41 1bi7_B P16INK4A, MTS1, multipl 96.2 0.0031 1.1E-07 49.0 3.5 48 11-73 71-120 (156)
42 3ehr_A Osteoclast-stimulating 96.2 0.0034 1.2E-07 51.4 3.8 56 3-73 88-149 (222)
43 1k1a_A B-cell lymphoma 3-encod 96.2 0.0016 5.6E-08 53.2 1.8 17 57-73 209-225 (241)
44 1awc_B Protein (GA binding pro 96.2 0.004 1.4E-07 48.0 4.0 30 3-33 17-49 (153)
45 2y1l_E Darpin-8.4; hydrolase-i 96.1 0.0035 1.2E-07 49.3 3.5 18 57-74 139-156 (169)
46 4gpm_A Engineered protein OR26 96.1 0.0036 1.2E-07 50.7 3.5 30 2-32 18-51 (169)
47 3c5r_A BARD-1, BRCA1-associate 96.1 0.0028 9.4E-08 48.0 2.7 21 12-33 5-25 (137)
48 1ycs_B 53BP2, P53BP2; ankyrin 96.1 0.0034 1.2E-07 52.5 3.4 58 2-73 51-112 (239)
49 1n11_A Ankyrin; clathrin, BAND 96.1 0.0044 1.5E-07 55.8 4.2 21 11-32 305-325 (437)
50 2pnn_A Transient receptor pote 96.0 0.0045 1.5E-07 52.2 4.0 72 2-74 162-243 (273)
51 3twr_A Tankyrase-2; ankyrin re 96.0 0.0044 1.5E-07 48.2 3.6 31 2-33 22-57 (165)
52 3ljn_A Hypothetical protein; a 96.0 0.0036 1.2E-07 55.1 3.5 50 10-74 204-254 (364)
53 3ui2_A Signal recognition part 96.0 0.0044 1.5E-07 52.3 3.6 17 57-73 137-153 (244)
54 1oy3_D Transcription factor in 95.9 0.0057 2E-07 50.9 4.0 22 11-33 3-24 (282)
55 2fo1_E LIN-12 protein; beta-ba 95.9 0.0057 1.9E-07 54.8 4.0 48 11-73 307-355 (373)
56 1ihb_A P18-INK4C(INK6), cyclin 95.8 0.0059 2E-07 47.0 3.5 17 57-73 96-112 (162)
57 3f6q_A Integrin-linked protein 95.8 0.0063 2.2E-07 48.1 3.7 30 3-33 20-54 (179)
58 1k1a_A B-cell lymphoma 3-encod 95.8 0.0054 1.8E-07 50.0 3.3 52 11-73 3-55 (241)
59 2f8y_A Notch homolog 1, transl 95.8 0.0061 2.1E-07 49.3 3.5 29 3-32 107-139 (223)
60 3jxi_A Vanilloid receptor-rela 95.7 0.014 4.8E-07 48.5 5.6 48 15-73 138-185 (260)
61 1ikn_D Protein (I-kappa-B-alph 95.7 0.0069 2.4E-07 49.8 3.6 52 11-73 2-54 (236)
62 2dzn_A Probable 26S proteasome 95.7 0.0079 2.7E-07 48.7 3.8 19 56-74 166-184 (228)
63 1ikn_D Protein (I-kappa-B-alph 95.6 0.005 1.7E-07 50.7 2.5 18 57-74 177-194 (236)
64 3t8k_A Uncharacterized protein 95.6 0.0048 1.6E-07 50.6 2.4 62 3-73 57-124 (186)
65 1yyh_A HN1;, notch 1, ankyrin 95.6 0.0071 2.4E-07 50.6 3.4 32 2-34 104-140 (253)
66 2rfm_A Putative ankyrin repeat 95.6 0.0071 2.4E-07 48.2 3.3 31 2-33 49-83 (192)
67 2f8y_A Notch homolog 1, transl 95.6 0.0084 2.9E-07 48.5 3.7 31 2-33 72-107 (223)
68 4g8k_A 2-5A-dependent ribonucl 95.5 0.006 2E-07 53.1 2.7 49 11-74 233-283 (337)
69 3utm_A Tankyrase-1; tankyrase, 95.5 0.0087 3E-07 51.2 3.6 19 12-31 206-224 (351)
70 3hra_A Ankyrin repeat family p 95.5 0.0089 3E-07 47.5 3.4 18 57-74 171-188 (201)
71 1d9s_A Cyclin-dependent kinase 95.4 0.0056 1.9E-07 46.4 2.0 48 11-73 39-87 (136)
72 2y1l_E Darpin-8.4; hydrolase-i 95.4 0.011 3.7E-07 46.4 3.6 30 2-32 28-61 (169)
73 2etb_A Transient receptor pote 95.4 0.01 3.5E-07 49.4 3.6 46 17-73 136-181 (256)
74 4b93_B Ankyrin repeat domain-c 95.4 0.013 4.4E-07 50.5 4.3 30 2-32 100-133 (269)
75 3deo_A Signal recognition part 95.3 0.011 3.9E-07 47.1 3.6 57 3-73 59-119 (183)
76 3v30_A DNA-binding protein rfx 95.3 0.012 4E-07 46.0 3.6 22 11-33 30-51 (172)
77 2rfa_A Transient receptor pote 95.3 0.016 5.6E-07 47.2 4.6 64 2-74 17-85 (232)
78 2xai_A ASB-9, ankyrin repeat a 95.3 0.011 3.8E-07 49.8 3.5 59 2-74 17-79 (261)
79 2vge_A RELA-associated inhibit 95.3 0.011 3.6E-07 49.7 3.4 29 3-32 36-68 (229)
80 1n0r_A 4ANK, 4 ankyrin repeats 95.3 0.012 4.1E-07 42.8 3.2 58 3-74 17-78 (126)
81 1ycs_B 53BP2, P53BP2; ankyrin 95.2 0.0093 3.2E-07 49.8 2.8 56 2-71 84-144 (239)
82 3jue_A Arfgap with coiled-coil 95.2 0.011 3.7E-07 54.2 3.4 18 57-74 294-311 (368)
83 4g8k_A 2-5A-dependent ribonucl 95.2 0.011 3.9E-07 51.3 3.3 33 2-34 39-75 (337)
84 1bi7_B P16INK4A, MTS1, multipl 95.2 0.0059 2E-07 47.4 1.4 54 2-69 92-149 (156)
85 4hbd_A KN motif and ankyrin re 95.2 0.0095 3.3E-07 51.1 2.8 50 10-72 104-153 (276)
86 3v31_A Ankyrin repeat family A 95.1 0.013 4.3E-07 45.6 3.1 21 11-32 30-50 (167)
87 2pnn_A Transient receptor pote 95.1 0.014 4.6E-07 49.2 3.5 47 16-73 147-193 (273)
88 1sw6_A Regulatory protein SWI6 95.1 0.015 5.2E-07 51.1 3.9 50 11-74 124-174 (327)
89 3hra_A Ankyrin repeat family p 95.0 0.015 5E-07 46.2 3.3 18 56-73 132-149 (201)
90 3b7b_A Euchromatic histone-lys 94.9 0.018 6.2E-07 46.9 3.7 17 57-73 170-186 (237)
91 3d9h_A CDNA FLJ77766, highly s 94.8 0.018 6.1E-07 49.4 3.5 17 57-73 118-134 (285)
92 2vge_A RELA-associated inhibit 94.8 0.014 4.9E-07 48.9 2.8 56 2-71 68-128 (229)
93 1s70_B 130 kDa myosin-binding 94.7 0.019 6.7E-07 48.4 3.6 57 3-73 55-115 (299)
94 1n11_A Ankyrin; clathrin, BAND 94.7 0.022 7.5E-07 51.2 4.0 29 3-32 260-292 (437)
95 3ui2_A Signal recognition part 94.6 0.024 8.3E-07 47.6 3.8 58 3-74 60-121 (244)
96 3aji_A 26S proteasome non-ATPa 94.5 0.023 7.9E-07 46.1 3.4 21 11-32 100-120 (231)
97 3eu9_A Huntingtin-interacting 94.5 0.02 6.9E-07 46.1 3.0 18 57-74 203-220 (240)
98 2l6b_A NR1C; ankyrin, consensu 94.4 0.023 7.9E-07 41.4 2.8 50 11-74 3-52 (115)
99 3d9h_A CDNA FLJ77766, highly s 94.2 0.024 8.3E-07 48.6 3.0 19 11-30 184-202 (285)
100 1n0q_A 3ANK, 3 ankyrin repeats 94.1 0.017 5.8E-07 40.8 1.4 30 2-32 49-82 (93)
101 2zgd_A 3 repeat synthetic anky 93.7 0.021 7.2E-07 41.9 1.5 50 11-74 18-67 (110)
102 1wdy_A 2-5A-dependent ribonucl 93.7 0.04 1.4E-06 45.4 3.3 29 3-32 20-53 (285)
103 2xai_A ASB-9, ankyrin repeat a 93.7 0.043 1.5E-06 46.1 3.5 31 2-33 50-84 (261)
104 3kea_A K1L; tropism, ANK repea 93.1 0.048 1.6E-06 46.8 2.9 17 57-73 121-138 (285)
105 2fo1_E LIN-12 protein; beta-ba 93.0 0.085 2.9E-06 47.0 4.5 23 10-33 159-181 (373)
106 3ljn_A Hypothetical protein; a 93.0 0.054 1.8E-06 47.5 3.1 55 11-74 167-221 (364)
107 1dcq_A PYK2-associated protein 91.9 0.089 3.1E-06 45.5 3.1 53 11-74 163-215 (278)
108 3eu9_A Huntingtin-interacting 91.6 0.13 4.4E-06 41.3 3.6 17 15-32 74-90 (240)
109 3jue_A Arfgap with coiled-coil 91.3 0.065 2.2E-06 49.0 1.6 21 11-32 262-282 (368)
110 3kea_A K1L; tropism, ANK repea 90.8 0.18 6.3E-06 43.1 3.9 63 11-74 25-105 (285)
111 3lvq_E ARF-GAP with SH3 domain 88.3 0.33 1.1E-05 45.2 3.9 50 14-74 168-217 (497)
112 2b0o_E UPLC1; arfgap, structur 87.6 0.44 1.5E-05 41.6 4.0 51 13-74 186-236 (301)
113 2aja_A Ankyrin repeat family p 78.3 0.29 9.9E-06 44.7 -1.1 20 13-33 88-107 (376)
114 2aja_A Ankyrin repeat family p 56.1 4.8 0.00016 36.5 2.0 47 11-74 313-359 (376)
No 1
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=97.39 E-value=0.00011 Score=52.64 Aligned_cols=59 Identities=19% Similarity=0.232 Sum_probs=40.4
Q ss_pred hhhhhhhcc----ccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhccccccccCCCCCChHHHHHhh
Q 045342 2 DVYNKFISP----QLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVHHFLKKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 2 ~~~~~~~~~----~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp~~~~~~~N~~g~Tp~dif~~~ 74 (243)
++.+.|+.. +.+|++| +||||.|++.++.+... +. ++. ....+.+|++|+||.++..+.
T Consensus 16 ~~v~~Ll~~g~~~n~~d~~g-~t~L~~A~~~~~~~~v~------~L----l~~---ga~~~~~d~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 16 EVVKLLLEAGADVNAKDKNG-RTPLHLAARNGHLEVVK------LL----LEA---GADVNAKDKNGRTPLHLAARN 78 (93)
T ss_dssp HHHHHHHHTTCCTTCCCTTS-CCHHHHHHHTTCHHHHH------HH----HHT---TCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHHHcCCCCcccCCCC-CCHHHHHHHcCCHHHHH------HH----HHc---CCCCCccCCCCCCHHHHHHHc
Confidence 345556653 7899999 99999999988754321 11 111 123577899999999887654
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=97.31 E-value=0.00013 Score=59.28 Aligned_cols=49 Identities=24% Similarity=0.209 Sum_probs=28.8
Q ss_pred ccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhc-cccccccCCCCCChHHHHHhh
Q 045342 11 QLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVH-HFLKKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 11 ~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp-~~~~~~~N~~g~Tp~dif~~~ 74 (243)
+.+|++| +||||+|++.++.+. |+..+. ....+.+|++|+||.++..+.
T Consensus 97 n~~d~~G-~TpLh~A~~~g~~~~--------------v~~Ll~~gad~~~~d~~G~TpL~~A~~~ 146 (169)
T 4gpm_A 97 NAKDSDG-RTPLHHAAENGHKEV--------------VKLLISKGADVNTSDSDGRTPLDLAREH 146 (169)
T ss_dssp TCCCTTS-CCHHHHHHHTTCHHH--------------HHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCCCCC-CCHHHHHHHcCCHHH--------------HHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence 4556666 666666665554332 222221 123577899999999887654
No 3
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=97.09 E-value=0.00019 Score=56.05 Aligned_cols=21 Identities=19% Similarity=-0.002 Sum_probs=15.5
Q ss_pred ccccCCCCCchhhhhhhccCCc
Q 045342 11 QLIDESTKDNILHLAAKLALPT 32 (243)
Q Consensus 11 ~~~D~~G~NT~LHLAa~~~~~~ 32 (243)
+.+|++| +||||+|+..++.+
T Consensus 69 ~~~~~~g-~t~L~~A~~~~~~~ 89 (165)
T 3twr_A 69 HAKDKGG-LVPLHNACSYGHYE 89 (165)
T ss_dssp TCCCTTS-CCHHHHHHHTTCHH
T ss_pred CccCCCC-CCHHHHHHHcCcHH
Confidence 5677777 88888888776654
No 4
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=97.07 E-value=0.00034 Score=53.97 Aligned_cols=20 Identities=10% Similarity=0.122 Sum_probs=14.2
Q ss_pred ccccccCCCCCChHHHHHhh
Q 045342 55 FLKKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 55 ~~~~~~N~~g~Tp~dif~~~ 74 (243)
...+.+|++|.||.++..+.
T Consensus 124 ~~~~~~~~~g~t~l~~A~~~ 143 (156)
T 1bd8_A 124 SDLHRRDARGLTPLELALQR 143 (156)
T ss_dssp SCTTCCCTTSCCHHHHHHHS
T ss_pred cCCCCcCCCCCCHHHHHHHc
Confidence 34567788888888877653
No 5
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=97.05 E-value=0.00033 Score=52.40 Aligned_cols=16 Identities=38% Similarity=0.281 Sum_probs=12.3
Q ss_pred ccccCCCCCChHHHHH
Q 045342 57 KKVQNIDGKTAQDIFI 72 (243)
Q Consensus 57 ~~~~N~~g~Tp~dif~ 72 (243)
.+.+|++|+||.++..
T Consensus 99 ~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 99 KTVKGPDGLTAFEATD 114 (123)
T ss_dssp TTCCCTTSCCHHHHCC
T ss_pred CCCcCCCCCCHHHHhC
Confidence 4678888999988763
No 6
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=97.02 E-value=0.00081 Score=55.29 Aligned_cols=34 Identities=18% Similarity=0.112 Sum_probs=23.4
Q ss_pred cccccccCCCCCChHHHHHhh-hHHHHHHHHHHHh
Q 045342 54 HFLKKVQNIDGKTAQDIFIEQ-HKDFLENSEKWMK 87 (243)
Q Consensus 54 ~~~~~~~N~~g~Tp~dif~~~-h~~l~~~~~~~~k 87 (243)
....+.+|++|+||.++..+. |.+.++.-+++.+
T Consensus 144 gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~ 178 (186)
T 3t8k_A 144 GLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIK 178 (186)
T ss_dssp TCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHH
T ss_pred CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHH
Confidence 345788999999999998774 4444444444444
No 7
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=96.97 E-value=0.00027 Score=60.16 Aligned_cols=62 Identities=26% Similarity=0.186 Sum_probs=38.2
Q ss_pred hhhhhhcc----ccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhccccccccCCCCCChHHHHHhhhHHH
Q 045342 3 VYNKFISP----QLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVHHFLKKVQNIDGKTAQDIFIEQHKDF 78 (243)
Q Consensus 3 ~~~~~~~~----~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp~~~~~~~N~~g~Tp~dif~~~h~~l 78 (243)
+.+.|+.. +.+|.+| +||||+|++.++.+... +. ++. ....+.+|++|+||.++..++..+.
T Consensus 214 ~v~~Ll~~g~d~~~~d~~g-~tpL~~A~~~~~~~~v~------~L----l~~---gad~~~~d~~g~t~l~~A~~~~~~~ 279 (299)
T 1s70_B 214 VLKLLIQARYDVNIKDYDG-WTPLHAAAHWGKEEACR------IL----VEN---LCDMEAVNKVGQTAFDVADEDILGY 279 (299)
T ss_dssp HHHHHHTTTCCTTCCCTTC-CCHHHHHHHTTCHHHHH------HH----HHT---TCCTTCCCTTSCCTTTSCCSGGGHH
T ss_pred HHHHHHHcCCCCCCcCCCC-CcHHHHHHhcCCHHHHH------HH----HHc---CCCCCCcCCCCCCHHHHHHHHHHHH
Confidence 44455543 5678888 88888888877644211 11 111 1235778999999998886654443
No 8
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=96.91 E-value=0.00064 Score=50.37 Aligned_cols=58 Identities=28% Similarity=0.222 Sum_probs=36.6
Q ss_pred hhhhhhcc----ccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhccccccccCCCCCChHHHHHhh
Q 045342 3 VYNKFISP----QLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVHHFLKKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 3 ~~~~~~~~----~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp~~~~~~~N~~g~Tp~dif~~~ 74 (243)
+.+.|+.. +.+|.+| +||||+|++.++.+... +. ++. ....+.+|.+|+||.++..+.
T Consensus 39 ~v~~Ll~~g~~i~~~d~~g-~tpLh~A~~~~~~~~v~------~L----l~~---ga~~~~~d~~g~tpl~~A~~~ 100 (110)
T 2zgd_A 39 EVRILMANGADVAAKDKNG-STPLHLAARNGHLEVVK------LL----LEA---GADVXAQDKFGKTAFDISIDN 100 (110)
T ss_dssp HHHHHHHTTCCTTCCCTTC-CCHHHHHHHTTCHHHHH------HH----HHT---TCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHcCCCCCccCCCC-CCHHHHHHHcCCHHHHH------HH----HHc---CCCccccccCCCcHHHHHHHc
Confidence 44445543 6688888 99999998887644211 11 111 123567889999999887653
No 9
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=96.89 E-value=0.00051 Score=59.89 Aligned_cols=49 Identities=16% Similarity=0.109 Sum_probs=31.7
Q ss_pred ccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhh-ccccccccCCCCCChHHHHHhh
Q 045342 11 QLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLV-HHFLKKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 11 ~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~v-p~~~~~~~N~~g~Tp~dif~~~ 74 (243)
+.+|++| +||||+|+..++.+. |+..+ .....+.+|++|+||.++..+.
T Consensus 199 n~~d~~g-~TpLh~A~~~g~~~~--------------v~~Ll~~gad~~~~d~~g~tpL~~A~~~ 248 (278)
T 1dcq_A 199 DKQTGKG-STALHYCCLTDNAEC--------------LKLLLRGKASIEIANESGETPLDIAKRL 248 (278)
T ss_dssp TCCCTTC-CCHHHHHHHTTCHHH--------------HHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cccCCCC-CCHHHHHHHcCCHHH--------------HHHHHHcCCCCCCccCCCCCHHHHHHHc
Confidence 5677777 777777777765432 11111 1123578899999999988754
No 10
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=96.88 E-value=0.00029 Score=58.98 Aligned_cols=29 Identities=14% Similarity=0.142 Sum_probs=17.6
Q ss_pred hhhhhhcc----ccccCC-CCCchhhhhhhccCCc
Q 045342 3 VYNKFISP----QLIDES-TKDNILHLAAKLALPT 32 (243)
Q Consensus 3 ~~~~~~~~----~~~D~~-G~NT~LHLAa~~~~~~ 32 (243)
+.+.|+.. +.+|+. | +||||+|++.++.+
T Consensus 173 ~v~~Ll~~g~~~~~~~~~~g-~tpL~~A~~~~~~~ 206 (282)
T 1oy3_D 173 MVRLLRDAGADLNKPEPTCG-RTPLHLAVEAQAAS 206 (282)
T ss_dssp HHHHHHHHTCCTTCCCTTTC-CCHHHHHHHTTCHH
T ss_pred HHHHHHHcCCCCCCCCCCCC-cCHHHHHHHcCCHH
Confidence 44455543 455544 6 88888888776644
No 11
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=96.85 E-value=0.00091 Score=52.22 Aligned_cols=22 Identities=9% Similarity=0.220 Sum_probs=15.1
Q ss_pred ccccCCCCCChHHHHHhh-hHHH
Q 045342 57 KKVQNIDGKTAQDIFIEQ-HKDF 78 (243)
Q Consensus 57 ~~~~N~~g~Tp~dif~~~-h~~l 78 (243)
.+.+|++|.||.++..+. +.+.
T Consensus 128 ~~~~~~~g~t~l~~A~~~~~~~~ 150 (167)
T 3v31_A 128 PTIETDSGYNSMDLAVALGYRSV 150 (167)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHH
T ss_pred CCCcCCCCCCHHHHHHHcCcHHH
Confidence 466788888888887654 3443
No 12
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=96.81 E-value=0.00054 Score=58.88 Aligned_cols=21 Identities=24% Similarity=0.123 Sum_probs=15.0
Q ss_pred ccccCCCCCchhhhhhhccCCc
Q 045342 11 QLIDESTKDNILHLAAKLALPT 32 (243)
Q Consensus 11 ~~~D~~G~NT~LHLAa~~~~~~ 32 (243)
+.+|++| +||||+|++.++.+
T Consensus 241 ~~~~~~g-~t~L~~A~~~g~~~ 261 (351)
T 3utm_A 241 NEKNKDF-MTPLHVAAERAHND 261 (351)
T ss_dssp TCCCTTC-CCHHHHHHHTTCHH
T ss_pred CCcCCCC-CCHHHHHHHcCCHH
Confidence 5677777 77777777776654
No 13
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=96.80 E-value=0.0008 Score=51.25 Aligned_cols=29 Identities=17% Similarity=-0.007 Sum_probs=17.7
Q ss_pred hhhhhhcc----ccccCCCCCchhhhhhhccCCc
Q 045342 3 VYNKFISP----QLIDESTKDNILHLAAKLALPT 32 (243)
Q Consensus 3 ~~~~~~~~----~~~D~~G~NT~LHLAa~~~~~~ 32 (243)
+.+.|+.. +.+|++| +||||.|++.++.+
T Consensus 29 ~v~~Ll~~g~~~~~~~~~g-~t~L~~A~~~~~~~ 61 (136)
T 2jab_A 29 EVRILMANGADVNAKDEYG-LTPLYLATAHGHLE 61 (136)
T ss_dssp HHHHHHHTTCCTTCCCTTS-CCHHHHHHHHTCHH
T ss_pred HHHHHHHcCCCCCCcCCCC-CCHHHHHHHcCCHH
Confidence 34444443 4667777 77777777766544
No 14
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=96.78 E-value=0.0012 Score=58.37 Aligned_cols=58 Identities=26% Similarity=0.252 Sum_probs=38.1
Q ss_pred hhhhhhc----cccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhccccccccCCCCCChHHHHHhh
Q 045342 3 VYNKFIS----PQLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVHHFLKKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 3 ~~~~~~~----~~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp~~~~~~~N~~g~Tp~dif~~~ 74 (243)
+.+-|+. ++.+|.+| +||||+|++.++.+.. .+.++. ....+.+|++|+||.++..+.
T Consensus 208 iv~~Ll~~gadvn~~d~~G-~TpLh~A~~~g~~~~v------~~Ll~~-------gad~~~~d~~G~TpL~~A~~~ 269 (301)
T 2b0o_E 208 LVDFIIQNGGHLDAKAADG-NTALHYAALYNQPDCL------KLLLKG-------RALVGTVNEAGETALDIARKK 269 (301)
T ss_dssp HHHHHHHHSSCTTCCCTTC-CCHHHHHHHTTCHHHH------HHHHHT-------TCCCSCCCTTSCCHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCCCCC-CCHHHHHHHcCCHHHH------HHHHHc-------CCCCCCcCCCCCCHHHHHHHc
Confidence 3444544 36788888 9999999988765422 111111 123578899999999998763
No 15
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=96.77 E-value=0.00077 Score=52.11 Aligned_cols=18 Identities=28% Similarity=0.126 Sum_probs=13.1
Q ss_pred ccccCCCCCChHHHHHhh
Q 045342 57 KKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 57 ~~~~N~~g~Tp~dif~~~ 74 (243)
.+.+|++|+||.++..+.
T Consensus 130 ~~~~~~~g~t~l~~A~~~ 147 (162)
T 1ihb_A 130 VGHRNHKGDTACDLARLY 147 (162)
T ss_dssp TTCCCTTSCCHHHHHHHT
T ss_pred CCCcCCCCCcHHHHHHHc
Confidence 367778888888876653
No 16
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=96.76 E-value=0.00082 Score=57.90 Aligned_cols=49 Identities=16% Similarity=0.145 Sum_probs=28.7
Q ss_pred ccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhh--ccccccccCCCCCChHHHHHhh
Q 045342 11 QLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLV--HHFLKKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 11 ~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~v--p~~~~~~~N~~g~Tp~dif~~~ 74 (243)
+.+|++| +||||+|+..++.+. |+..+ +....+.+|++|+||.++..+.
T Consensus 210 n~~d~~G-~TpLh~A~~~g~~~i--------------v~~Ll~~~gad~~~~d~~g~TpL~~A~~~ 260 (276)
T 4hbd_A 210 NVQDDDG-STALMCACEHGHKEI--------------AGLLLAVPSCDISLTDRDGSTALMVALDA 260 (276)
T ss_dssp TCCCTTS-CCHHHHHHHHTCHHH--------------HHHHHTSTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCCCCCC-CCHHHHHHHCCCHHH--------------HHHHHhcCCCCCcCcCCCCCCHHHHHHHc
Confidence 4455555 555555555544321 23222 2334577899999999887654
No 17
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=96.73 E-value=0.0017 Score=53.16 Aligned_cols=69 Identities=17% Similarity=0.097 Sum_probs=38.5
Q ss_pred hhhhhhhcc----ccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhccccccccCCCCCChHHHHHhh
Q 045342 2 DVYNKFISP----QLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVHHFLKKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 2 ~~~~~~~~~----~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp~~~~~~~N~~g~Tp~dif~~~ 74 (243)
++.+.|+.. +.+|++| +||||+|++.++.+....+. .+.++.... .-.+...+.+|++|+||.++..+.
T Consensus 135 ~~v~~Ll~~ga~~~~~d~~g-~t~L~~A~~~~~~~~~~~i~--~~Ll~~g~~-~~~~~~~~~~~~~g~tpl~~A~~~ 207 (232)
T 2rfa_A 135 EIVRLLIEHGADIRAQDSLG-NTVLHILILQPNKTFACQMY--NLLLSYDGG-DHLKSLELVPNNQGLTPFKLAGVE 207 (232)
T ss_dssp HHHHHHHHTTCCTTCCCTTS-CCHHHHHHTCSCHHHHHHHH--HHHHHTTCS-CSSCCGGGCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCCC-CCHHHHHHHcCChHHHHHHH--HHHHhcCCc-hhhhhhhccCCCCCCCHHHHHHHc
Confidence 345555543 6788888 88888888877644211000 111111100 000111268899999999998764
No 18
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=96.73 E-value=0.0031 Score=52.62 Aligned_cols=72 Identities=14% Similarity=0.092 Sum_probs=41.9
Q ss_pred hhhhhhhc-------cccccCCCCCchhhhhhhccCCcchhh---hhhHHhhcchhhhhhhccccccccCCCCCChHHHH
Q 045342 2 DVYNKFIS-------PQLIDESTKDNILHLAAKLALPTHLRI---MLGVALKMQREVEKLVHHFLKKVQNIDGKTAQDIF 71 (243)
Q Consensus 2 ~~~~~~~~-------~~~~D~~G~NT~LHLAa~~~~~~~~~~---~~~~aL~m~~eV~~~vp~~~~~~~N~~g~Tp~dif 71 (243)
++.+.|+. ++.+|++| +||||+|++.++...-.. ..-..+.++...+-.......+.+|++|+||.++.
T Consensus 154 ~~v~~Ll~~~~~ga~~~~~d~~g-~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A 232 (260)
T 3jxi_A 154 HIVHYLTENGHKQADLRRQDSRG-NTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMA 232 (260)
T ss_dssp HHHHHHHHCSSCCCCTTCCCTTS-CCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHH
T ss_pred HHHHHHHhccccCCCCcccCCCC-CcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHH
Confidence 45566666 37899999 999999998776432100 00011111111111111122367999999999998
Q ss_pred Hhh
Q 045342 72 IEQ 74 (243)
Q Consensus 72 ~~~ 74 (243)
.+.
T Consensus 233 ~~~ 235 (260)
T 3jxi_A 233 AKT 235 (260)
T ss_dssp HHT
T ss_pred HHc
Confidence 764
No 19
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=96.72 E-value=0.0012 Score=49.32 Aligned_cols=59 Identities=15% Similarity=0.031 Sum_probs=39.4
Q ss_pred hhhhhhhcc----ccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhccccccccCCCCCChHHHHHhh
Q 045342 2 DVYNKFISP----QLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVHHFLKKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 2 ~~~~~~~~~----~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp~~~~~~~N~~g~Tp~dif~~~ 74 (243)
++.+.|+.. +.+|++| +||||.|++.++.+... +.+ +. ....+.+|++|.||..+..+.
T Consensus 21 ~~v~~ll~~~~~~~~~~~~g-~t~L~~A~~~~~~~~v~------~Ll----~~---g~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 21 DEVKDYVAKGEDVNRTLEGG-RKPLHYAADCGQLEILE------FLL----LK---GADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp HHHHHHHHTTCCTTSCCTTS-SCHHHHHHHTTCHHHHH------HHH----TT---TCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHHcCCCcCccCCCC-CcHHHHHHHcCCHHHHH------HHH----Hc---CCCCCcCCCCCCCHHHHHHHc
Confidence 344555544 7889999 99999999988754321 111 11 123577899999998877653
No 20
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=96.71 E-value=0.0015 Score=53.47 Aligned_cols=19 Identities=16% Similarity=0.151 Sum_probs=13.9
Q ss_pred ccccCCCCCChHHHHHhhh
Q 045342 57 KKVQNIDGKTAQDIFIEQH 75 (243)
Q Consensus 57 ~~~~N~~g~Tp~dif~~~h 75 (243)
.+.+|++|+||.++..+..
T Consensus 203 ~~~~d~~g~t~l~~A~~~~ 221 (237)
T 3b7b_A 203 VTLKNKEGETPLQCASLNS 221 (237)
T ss_dssp TTCCCTTSCCHHHHSCTTC
T ss_pred CCccCCCCCCHHHHHHHHH
Confidence 4677888888888876543
No 21
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=96.67 E-value=0.00054 Score=52.03 Aligned_cols=62 Identities=18% Similarity=0.118 Sum_probs=33.9
Q ss_pred ccccCCCCCchhhhhhhccCCcchhhh--hhH-----------Hh-----hcchh-hhhhhc-cccccccCCCCCChHHH
Q 045342 11 QLIDESTKDNILHLAAKLALPTHLRIM--LGV-----------AL-----KMQRE-VEKLVH-HFLKKVQNIDGKTAQDI 70 (243)
Q Consensus 11 ~~~D~~G~NT~LHLAa~~~~~~~~~~~--~~~-----------aL-----~m~~e-V~~~vp-~~~~~~~N~~g~Tp~di 70 (243)
+.+|++| +||||+|+..++.+....+ .++ +| .-..| ++..+. ....+.+|.+|+||.++
T Consensus 37 ~~~~~~g-~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~ 115 (137)
T 3c5r_A 37 NVKDHAG-WTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDY 115 (137)
T ss_dssp CCCCTTS-CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGG
T ss_pred CcCCCCC-CCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 5677777 7888887777665432211 000 01 01111 333222 12357889999999988
Q ss_pred HHh
Q 045342 71 FIE 73 (243)
Q Consensus 71 f~~ 73 (243)
..+
T Consensus 116 A~~ 118 (137)
T 3c5r_A 116 TDD 118 (137)
T ss_dssp CCC
T ss_pred Hhh
Confidence 764
No 22
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=96.65 E-value=0.001 Score=50.68 Aligned_cols=18 Identities=28% Similarity=0.209 Sum_probs=13.9
Q ss_pred ccccCCCCCChHHHHHhh
Q 045342 57 KKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 57 ~~~~N~~g~Tp~dif~~~ 74 (243)
.+.+|++|+||.++..+.
T Consensus 104 ~~~~d~~g~tpl~~A~~~ 121 (136)
T 1d9s_A 104 LDVCDAWGRLPVDLAEEQ 121 (136)
T ss_dssp CCCCSSSSSCHHHHHHHH
T ss_pred CCccCCCCCCHHHHHHHc
Confidence 467788999998887653
No 23
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=96.65 E-value=0.0009 Score=53.12 Aligned_cols=21 Identities=29% Similarity=0.403 Sum_probs=14.5
Q ss_pred ccccCCCCCchhhhhhhccCCc
Q 045342 11 QLIDESTKDNILHLAAKLALPT 32 (243)
Q Consensus 11 ~~~D~~G~NT~LHLAa~~~~~~ 32 (243)
+.+|++| +||||+|+..++.+
T Consensus 66 ~~~~~~g-~t~L~~A~~~~~~~ 86 (179)
T 3f6q_A 66 NVMNRGD-DTPLHLAASHGHRD 86 (179)
T ss_dssp TCCCTTC-CCHHHHHHHTTCHH
T ss_pred CCcCCCC-CCHHHHHHHcCCHH
Confidence 5667777 77777777766544
No 24
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=96.64 E-value=0.00073 Score=58.41 Aligned_cols=62 Identities=23% Similarity=0.131 Sum_probs=34.6
Q ss_pred ccccCCCCCchhhhhhhccCCcchhhh--hhH----------------Hhhcchh-hhhhhcc-ccccccCCCCCChHHH
Q 045342 11 QLIDESTKDNILHLAAKLALPTHLRIM--LGV----------------ALKMQRE-VEKLVHH-FLKKVQNIDGKTAQDI 70 (243)
Q Consensus 11 ~~~D~~G~NT~LHLAa~~~~~~~~~~~--~~~----------------aL~m~~e-V~~~vp~-~~~~~~N~~g~Tp~di 70 (243)
+.+|++| +||||+|++.++.+....+ .|+ +..-+.| |+..+.. ...+.+|++|+||.++
T Consensus 146 n~~d~~g-~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~ 224 (269)
T 4b93_B 146 NKKDLSG-NTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDC 224 (269)
T ss_dssp CCCCTTC-CCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGG
T ss_pred CCCCCCC-CCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence 5677777 7777777777665533211 010 0011111 3333322 2357899999999998
Q ss_pred HHh
Q 045342 71 FIE 73 (243)
Q Consensus 71 f~~ 73 (243)
..+
T Consensus 225 A~~ 227 (269)
T 4b93_B 225 AEQ 227 (269)
T ss_dssp SCT
T ss_pred HHh
Confidence 754
No 25
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=96.63 E-value=0.0031 Score=49.35 Aligned_cols=18 Identities=17% Similarity=0.171 Sum_probs=13.2
Q ss_pred ccccCCCCCChHHHHHhh
Q 045342 57 KKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 57 ~~~~N~~g~Tp~dif~~~ 74 (243)
.+.+|++|.||.++..+.
T Consensus 128 ~~~~~~~g~t~l~~A~~~ 145 (172)
T 3v30_A 128 LTTEADSGYTPMDLAVAL 145 (172)
T ss_dssp TTCCCTTSCCHHHHHHHH
T ss_pred ccccCCCCCCHHHHHHHh
Confidence 466778888888887654
No 26
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=96.62 E-value=0.0012 Score=53.97 Aligned_cols=17 Identities=18% Similarity=0.147 Sum_probs=12.1
Q ss_pred ccccCCCCCChHHHHHh
Q 045342 57 KKVQNIDGKTAQDIFIE 73 (243)
Q Consensus 57 ~~~~N~~g~Tp~dif~~ 73 (243)
.+.+|++|+||.++..+
T Consensus 198 ~~~~~~~g~t~l~~A~~ 214 (231)
T 3aji_A 198 IYIENKEEKTPLQVAKG 214 (231)
T ss_dssp SCCCCTTSCCHHHHSCH
T ss_pred CCCCCCCCCCHHHHHHh
Confidence 45677888888877654
No 27
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=96.60 E-value=0.0015 Score=50.42 Aligned_cols=21 Identities=19% Similarity=0.151 Sum_probs=14.5
Q ss_pred ccccCCCCCchhhhhhhccCCc
Q 045342 11 QLIDESTKDNILHLAAKLALPT 32 (243)
Q Consensus 11 ~~~D~~G~NT~LHLAa~~~~~~ 32 (243)
+.+|++| +||||.|++.++.+
T Consensus 61 ~~~~~~g-~t~L~~A~~~~~~~ 81 (153)
T 1awc_B 61 DARTKVD-RTPLHMAASEGHAN 81 (153)
T ss_dssp TCCCTTC-CCHHHHHHHHTCHH
T ss_pred CCCCCCC-CCHHHHHHHcChHH
Confidence 5667777 77777777766544
No 28
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=96.59 E-value=0.0035 Score=52.28 Aligned_cols=72 Identities=15% Similarity=0.137 Sum_probs=40.2
Q ss_pred hhhhhhhc-------cccccCCCCCchhhhhhhccCCcch--hhhh-hHHhhcchhhhhhhccccccccCCCCCChHHHH
Q 045342 2 DVYNKFIS-------PQLIDESTKDNILHLAAKLALPTHL--RIML-GVALKMQREVEKLVHHFLKKVQNIDGKTAQDIF 71 (243)
Q Consensus 2 ~~~~~~~~-------~~~~D~~G~NT~LHLAa~~~~~~~~--~~~~-~~aL~m~~eV~~~vp~~~~~~~N~~g~Tp~dif 71 (243)
++.+.|+. ++.+|++| +||||+|++.+....- .... -..+.++...+-.......+.+|++|+||.++.
T Consensus 150 ~~v~~Ll~~~~~ga~~n~~d~~g-~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A 228 (256)
T 2etb_A 150 DVVTYLLENPHQPASLEATDSLG-NTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLA 228 (256)
T ss_dssp HHHHHHHHCSSCCCCTTCCCTTS-CCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHH
T ss_pred HHHHHHHhccccCCCcCccCCCC-CCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHH
Confidence 45666776 37899999 9999999995443210 0000 001111111110000011278899999999998
Q ss_pred Hhh
Q 045342 72 IEQ 74 (243)
Q Consensus 72 ~~~ 74 (243)
.+.
T Consensus 229 ~~~ 231 (256)
T 2etb_A 229 AKE 231 (256)
T ss_dssp HHT
T ss_pred HHh
Confidence 764
No 29
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=96.56 E-value=0.0014 Score=52.54 Aligned_cols=17 Identities=29% Similarity=0.307 Sum_probs=12.3
Q ss_pred ccccCCCCCChHHHHHh
Q 045342 57 KKVQNIDGKTAQDIFIE 73 (243)
Q Consensus 57 ~~~~N~~g~Tp~dif~~ 73 (243)
.+.+|++|.||.++..+
T Consensus 136 ~~~~d~~g~tpl~~A~~ 152 (183)
T 3deo_A 136 IEVEDERGLTALELARE 152 (183)
T ss_dssp TTCCCTTSCCHHHHHHH
T ss_pred CcCCCCCCCCHHHHHHH
Confidence 45677888888777655
No 30
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=96.55 E-value=0.00097 Score=54.20 Aligned_cols=18 Identities=17% Similarity=0.287 Sum_probs=14.5
Q ss_pred cccccCCCCCChHHHHHh
Q 045342 56 LKKVQNIDGKTAQDIFIE 73 (243)
Q Consensus 56 ~~~~~N~~g~Tp~dif~~ 73 (243)
..+.+|++|+||.++..+
T Consensus 200 ~~~~~~~~g~t~l~~A~~ 217 (228)
T 2dzn_A 200 EYDLVDNKGAKAEDVALN 217 (228)
T ss_dssp CSCCBCTTSCBGGGGCSS
T ss_pred CCCccCCCCCcHHHHHHH
Confidence 467889999999988754
No 31
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=96.52 E-value=0.0019 Score=51.68 Aligned_cols=21 Identities=14% Similarity=0.012 Sum_probs=15.3
Q ss_pred ccccCCCCCchhhhhhhccCCc
Q 045342 11 QLIDESTKDNILHLAAKLALPT 32 (243)
Q Consensus 11 ~~~D~~G~NT~LHLAa~~~~~~ 32 (243)
+.+|.+| +||||.|+..++.+
T Consensus 95 ~~~~~~g-~t~L~~A~~~~~~~ 115 (192)
T 2rfm_A 95 NTKDFSG-KTPLMWSIIFGYSE 115 (192)
T ss_dssp TCCCTTS-CCHHHHHHHHTCHH
T ss_pred CCCCCCC-CcHHHHHHHcCCHH
Confidence 5677777 88888888776644
No 32
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=96.50 E-value=0.002 Score=54.01 Aligned_cols=29 Identities=21% Similarity=0.324 Sum_probs=19.7
Q ss_pred hhhhhhcc----ccccCCCCCchhhhhhhccCCc
Q 045342 3 VYNKFISP----QLIDESTKDNILHLAAKLALPT 32 (243)
Q Consensus 3 ~~~~~~~~----~~~D~~G~NT~LHLAa~~~~~~ 32 (243)
+.+.|+.. +.+|++| +||||.|++.++.+
T Consensus 139 ~v~~Ll~~g~~~~~~d~~g-~t~L~~A~~~~~~~ 171 (253)
T 1yyh_A 139 MLEDLINSHADVNAVDDLG-KSALHWAAAVNNVD 171 (253)
T ss_dssp HHHHHHHTTCCTTCBCTTS-CBHHHHHHHHTCHH
T ss_pred HHHHHHHcCCCCCCcCCCC-CCHHHHHHHcCCHH
Confidence 44455443 6778888 88888888777654
No 33
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=96.46 E-value=0.0018 Score=47.53 Aligned_cols=58 Identities=22% Similarity=0.229 Sum_probs=35.0
Q ss_pred hhhhhhcc----ccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhccccccccCCCCCChHHHHHhh
Q 045342 3 VYNKFISP----QLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVHHFLKKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 3 ~~~~~~~~----~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp~~~~~~~N~~g~Tp~dif~~~ 74 (243)
+.+.|+.. +.+|.+| +||||.|+..++.+.. .+.++ . ....+.+|.+|.||..+....
T Consensus 24 ~~~~Ll~~g~~~~~~d~~g-~t~L~~A~~~~~~~~~------~~Ll~----~---g~~~~~~d~~g~tpl~~A~~~ 85 (115)
T 2l6b_A 24 EVKKLLSKGADVNARSKDG-NTPLHLAAKNGHAEIV------KLLLA----K---GADVNARSKDGNTPEHLAKKN 85 (115)
T ss_dssp HHHHHTTTTCCSSCCCSSS-CCTTHHHHTTTCHHHH------HHHTT----T---TCCTTCCCTTCCCTTHHHHTT
T ss_pred HHHHHHHcCCCCCCcCCCC-CCHHHHHHHcCcHHHH------HHHHH----c---CCCCcccCCCCCCHHHHHHHC
Confidence 34444443 5677777 8888888877654321 11111 1 113467889999999887654
No 34
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=96.44 E-value=0.0021 Score=46.96 Aligned_cols=18 Identities=11% Similarity=0.274 Sum_probs=13.2
Q ss_pred ccccCCCCCChHHHHHhh
Q 045342 57 KKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 57 ~~~~N~~g~Tp~dif~~~ 74 (243)
.+.+|.+|+||.++..+.
T Consensus 94 ~~~~~~~g~t~l~~A~~~ 111 (126)
T 1n0r_A 94 VNAKDKNGRTPLHLAARN 111 (126)
T ss_dssp TTCCCTTSCCHHHHHHHT
T ss_pred CcccCCCCCCHHHHHHHc
Confidence 456788888988887653
No 35
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=96.32 E-value=0.0017 Score=60.90 Aligned_cols=58 Identities=26% Similarity=0.252 Sum_probs=39.3
Q ss_pred hhhhhhc----cccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhccccccccCCCCCChHHHHHhh
Q 045342 3 VYNKFIS----PQLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVHHFLKKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 3 ~~~~~~~----~~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp~~~~~~~N~~g~Tp~dif~~~ 74 (243)
+.+.|+. ++.+|++| +||||+|+..++.+.. .+.++. ....+.+|++|.||.++..+.
T Consensus 189 ~v~~Ll~~ga~vn~~d~~g-~TpLh~A~~~g~~~~v------~~Ll~~-------ga~~~~~d~~g~tpl~~A~~~ 250 (497)
T 3lvq_E 189 LVDFIIQNGGHLDAKAADG-NTALHYAALYNQPDCL------KLLLKG-------RALVGTVNEAGETALDIARKK 250 (497)
T ss_dssp HHHHHHHHSCCTTCCCSSS-CCHHHHHTTTTCHHHH------HHHHHT-------CCCCSCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHcCCCCCccCCCC-CcHHHHHHHcCCHHHH------HHHHHc-------CCCCCCcCCCCCCHHHHHHHc
Confidence 4455554 37889999 9999999988775432 111111 123578899999999987653
No 36
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=96.28 E-value=0.002 Score=52.84 Aligned_cols=18 Identities=28% Similarity=0.335 Sum_probs=14.3
Q ss_pred cccccCCCCCChHHHHHh
Q 045342 56 LKKVQNIDGKTAQDIFIE 73 (243)
Q Consensus 56 ~~~~~N~~g~Tp~dif~~ 73 (243)
..+.+|++|+||.++..+
T Consensus 165 ~~~~~~~~g~t~l~~A~~ 182 (222)
T 3ehr_A 165 RTDLRNIEKKLAFDMATN 182 (222)
T ss_dssp CSCCCCTTSCCHHHHCCS
T ss_pred CCccccCCCCCHHHHhcc
Confidence 357789999999988654
No 37
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=96.26 E-value=0.003 Score=48.52 Aligned_cols=48 Identities=19% Similarity=0.175 Sum_probs=27.0
Q ss_pred ccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhc-cccccccCCCCCChHHHHHh
Q 045342 11 QLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVH-HFLKKVQNIDGKTAQDIFIE 73 (243)
Q Consensus 11 ~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp-~~~~~~~N~~g~Tp~dif~~ 73 (243)
+.+|++| +||||.|++.++.+. ++..+. ....+.+|.+|.||.....+
T Consensus 62 ~~~~~~g-~t~L~~A~~~~~~~~--------------v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 110 (156)
T 1bd8_A 62 NVQDTSG-TSPVHDAARTGFLDT--------------LKVLVEHGADVNVPDGTGALPIHLAVQ 110 (156)
T ss_dssp TCCCTTS-CCHHHHHHHTTCHHH--------------HHHHHHTTCCSCCCCTTSCCHHHHHHH
T ss_pred CCcCCCC-CCHHHHHHHcCcHHH--------------HHHHHHcCCCCCCcCCCCCcHHHHHHH
Confidence 4566666 666666666655332 111111 11245677888888777654
No 38
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=96.26 E-value=0.0015 Score=57.68 Aligned_cols=49 Identities=18% Similarity=0.099 Sum_probs=35.3
Q ss_pred cccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhccccccccCCCCCChHHHHH
Q 045342 10 PQLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVHHFLKKVQNIDGKTAQDIFI 72 (243)
Q Consensus 10 ~~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp~~~~~~~N~~g~Tp~dif~ 72 (243)
++.+|++| +||||+|++.++.+.. .+.++. ....+.+|++|+||.++..
T Consensus 276 ~n~~d~~G-~TpLh~A~~~g~~~~v------~~Ll~~-------Gad~~~~d~~G~TpL~~A~ 324 (327)
T 1sw6_A 276 LNAQDSNG-DTCLNIAARLGNISIV------DALLDY-------GADPFIANKSGLRPVDFGA 324 (327)
T ss_dssp TTCCCTTS-CCHHHHHHHHCCHHHH------HHHHHT-------TCCTTCCCTTSCCGGGGTC
T ss_pred CCCCCCCC-CCHHHHHHHcCCHHHH------HHHHHc-------CCCCcccCCCCCCHHHHHH
Confidence 68899999 9999999999875432 111211 1235789999999988753
No 39
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=96.21 E-value=0.0032 Score=47.85 Aligned_cols=49 Identities=29% Similarity=0.165 Sum_probs=29.2
Q ss_pred ccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhccccccccCCCCCChHHHHHh
Q 045342 11 QLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVHHFLKKVQNIDGKTAQDIFIE 73 (243)
Q Consensus 11 ~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp~~~~~~~N~~g~Tp~dif~~ 73 (243)
+.+|++| +||||.|++.++.+... +- ++. ....+.+|++|.||.++..+
T Consensus 74 ~~~d~~g-~t~L~~A~~~~~~~~v~--------~L--l~~---g~~~~~~~~~g~tpl~~A~~ 122 (136)
T 2jab_A 74 NAVDAIG-FTPLHLAAFIGHLEIAE--------VL--LKH---GADVNAQDKFGKTAFDISIG 122 (136)
T ss_dssp TCCCTTC-CCHHHHHHHHTCHHHHH--------HH--HHT---TCCTTCCCTTSCCHHHHHHH
T ss_pred CcCCCCC-CCHHHHHHHcCCHHHHH--------HH--HHc---CCCCcCcCCCCCCHHHHHHH
Confidence 5677777 88888888776543210 00 111 12346677778888777654
No 40
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=96.21 E-value=0.0032 Score=52.19 Aligned_cols=19 Identities=32% Similarity=0.226 Sum_probs=13.7
Q ss_pred cccccCCCCCChHHHHHhh
Q 045342 56 LKKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 56 ~~~~~N~~g~Tp~dif~~~ 74 (243)
..+.+|++|+||.++..+.
T Consensus 245 ~~~~~~~~g~t~l~~A~~~ 263 (285)
T 1wdy_A 245 EINDTDSDGKTALLLAVEL 263 (285)
T ss_dssp CTTCCCTTSCCHHHHHHHT
T ss_pred CccccCCCCCcHHHHHHHc
Confidence 3567788888888877653
No 41
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=96.20 E-value=0.0031 Score=49.01 Aligned_cols=48 Identities=21% Similarity=0.112 Sum_probs=28.0
Q ss_pred ccccCCCCCc-hhhhhhhccCCcchhhhhhHHhhcchhhhhhhc-cccccccCCCCCChHHHHHh
Q 045342 11 QLIDESTKDN-ILHLAAKLALPTHLRIMLGVALKMQREVEKLVH-HFLKKVQNIDGKTAQDIFIE 73 (243)
Q Consensus 11 ~~~D~~G~NT-~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp-~~~~~~~N~~g~Tp~dif~~ 73 (243)
+.+|.+| +| |||+|++.++.+. |+..+. ....+.+|.+|.||.++..+
T Consensus 71 ~~~d~~g-~ttpL~~A~~~~~~~~--------------v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 120 (156)
T 1bi7_B 71 NCADPAT-LTRPVHDAAREGFLDT--------------LVVLHRAGARLDVRDAWGRLPVDLAEE 120 (156)
T ss_dssp CCCCTTT-CCCHHHHHHHHTCHHH--------------HHHHHHHTCCSSCCCTTCCCHHHHHHH
T ss_pred CCcCCCC-CcHHHHHHHHCCCHHH--------------HHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 4566666 66 7777776655332 111111 12246778888899887765
No 42
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=96.19 E-value=0.0034 Score=51.44 Aligned_cols=56 Identities=20% Similarity=0.056 Sum_probs=37.3
Q ss_pred hhhhhhc----cccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhh--ccccccccCCCCCChHHHHHh
Q 045342 3 VYNKFIS----PQLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLV--HHFLKKVQNIDGKTAQDIFIE 73 (243)
Q Consensus 3 ~~~~~~~----~~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~v--p~~~~~~~N~~g~Tp~dif~~ 73 (243)
+.+.|+. ++.+|++| +||||+|+..++.+. |+..+ +....+.+|.+|.||..+...
T Consensus 88 ~v~~Ll~~g~~~~~~~~~g-~t~L~~A~~~~~~~~--------------v~~Ll~~~g~~~~~~d~~g~tpL~~A~~ 149 (222)
T 3ehr_A 88 WLRECLDNRVGVNGLDKAG-STALYWACHGGHKDI--------------VEMLFTQPNIELNQQNKLGDTALHAAAW 149 (222)
T ss_dssp HHHHHHHTTCCTTCCCTTS-CCHHHHHHHTTCHHH--------------HHHHTTSTTCCCCCCCTTSCCHHHHHHH
T ss_pred HHHHHHhCCCCccccCCCC-CCHHHHHHHcCCHHH--------------HHHHHcCCCCCccccCCCCCCHHHHHHH
Confidence 4455554 36778888 999999988876442 22222 123457889999999988765
No 43
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=96.18 E-value=0.0016 Score=53.16 Aligned_cols=17 Identities=12% Similarity=0.087 Sum_probs=13.9
Q ss_pred ccccCCCCCChHHHHHh
Q 045342 57 KKVQNIDGKTAQDIFIE 73 (243)
Q Consensus 57 ~~~~N~~g~Tp~dif~~ 73 (243)
.+.+|++|+||.++..+
T Consensus 209 ~~~~~~~g~tpl~~A~~ 225 (241)
T 1k1a_A 209 SSLKNCHNDTPLMVARS 225 (241)
T ss_dssp TTCCCTTSCCTTTTCSS
T ss_pred CCCcCCCCCCHHHHHHh
Confidence 57789999999988654
No 44
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=96.18 E-value=0.004 Score=48.02 Aligned_cols=30 Identities=20% Similarity=0.082 Sum_probs=21.5
Q ss_pred hhhhhhcc---ccccCCCCCchhhhhhhccCCcc
Q 045342 3 VYNKFISP---QLIDESTKDNILHLAAKLALPTH 33 (243)
Q Consensus 3 ~~~~~~~~---~~~D~~G~NT~LHLAa~~~~~~~ 33 (243)
+.+.|+.. ...|.+| +||||.|+..++.+.
T Consensus 17 ~v~~Ll~~g~~~~~~~~g-~t~L~~A~~~~~~~~ 49 (153)
T 1awc_B 17 EVRILMANGAPFTTDWLG-TSPLHLAAQYGHFST 49 (153)
T ss_dssp HHHHHHHHTCCCCCCTTC-CCHHHHHHHHTCHHH
T ss_pred HHHHHHHcCCCCCcCCCC-CCHHHHHHHcCCHHH
Confidence 44555544 2368889 999999999887653
No 45
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=96.15 E-value=0.0035 Score=49.30 Aligned_cols=18 Identities=44% Similarity=0.425 Sum_probs=13.0
Q ss_pred ccccCCCCCChHHHHHhh
Q 045342 57 KKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 57 ~~~~N~~g~Tp~dif~~~ 74 (243)
.+.+|.+|.||.++..+.
T Consensus 139 ~~~~~~~g~t~l~~A~~~ 156 (169)
T 2y1l_E 139 VNAQDKFGKTAFDISIDN 156 (169)
T ss_dssp TTCCCTTSCCHHHHHHHT
T ss_pred CCCcCCCCCCHHHHHHHh
Confidence 456778888888876653
No 46
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=96.12 E-value=0.0036 Score=50.67 Aligned_cols=30 Identities=23% Similarity=0.189 Sum_probs=18.6
Q ss_pred hhhhhhhcc----ccccCCCCCchhhhhhhccCCc
Q 045342 2 DVYNKFISP----QLIDESTKDNILHLAAKLALPT 32 (243)
Q Consensus 2 ~~~~~~~~~----~~~D~~G~NT~LHLAa~~~~~~ 32 (243)
++.+.||.. +.+|++| +||||.|+..+..+
T Consensus 18 ~~v~~Ll~~Gadvn~~d~~g-~t~l~~a~~~~~~~ 51 (169)
T 4gpm_A 18 DRVKDLIENGADVNASDSDG-RTPLHHAAENGHKE 51 (169)
T ss_dssp HHHHHHHHTTCCTTCCCTTS-CCHHHHHHHTTCHH
T ss_pred HHHHHHHHCCCCCCCcCCCC-CCHHHHHHHcCCHH
Confidence 345555543 5677777 77777777666543
No 47
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=96.11 E-value=0.0028 Score=48.02 Aligned_cols=21 Identities=14% Similarity=0.233 Sum_probs=17.9
Q ss_pred cccCCCCCchhhhhhhccCCcc
Q 045342 12 LIDESTKDNILHLAAKLALPTH 33 (243)
Q Consensus 12 ~~D~~G~NT~LHLAa~~~~~~~ 33 (243)
.+|++| +||||+|++.++.+.
T Consensus 5 ~~~~~g-~t~L~~A~~~~~~~~ 25 (137)
T 3c5r_A 5 FTNHRG-ETLLHIASIKGDIPS 25 (137)
T ss_dssp CCCTTC-CCHHHHHHHHTCHHH
T ss_pred CcCCCC-CCHHHHHHHcCCHHH
Confidence 579999 999999999987553
No 48
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=96.10 E-value=0.0034 Score=52.52 Aligned_cols=58 Identities=17% Similarity=0.126 Sum_probs=38.2
Q ss_pred hhhhhhhcc----ccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhccccccccCCCCCChHHHHHh
Q 045342 2 DVYNKFISP----QLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVHHFLKKVQNIDGKTAQDIFIE 73 (243)
Q Consensus 2 ~~~~~~~~~----~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp~~~~~~~N~~g~Tp~dif~~ 73 (243)
++.+.|+.. +.+|++| +||||+|++.++.+... +. ++. ....+.+|++|.||......
T Consensus 51 ~~v~~Ll~~g~~~~~~d~~g-~t~L~~A~~~g~~~~v~------~L----l~~---ga~~~~~d~~g~tpL~~A~~ 112 (239)
T 1ycs_B 51 DLVQRIIYEVDDPSLPNDEG-ITALHNAVCAGHTEIVK------FL----VQF---GVNVNAADSDGWTPLHCAAS 112 (239)
T ss_dssp HHHHHHTSTTSSCCCCCTTS-CCHHHHHHHHTCHHHHH------HH----HHH---TCCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHHHHcCCCCCCcCCCC-CCHHHHHHHcCCHHHHH------HH----HHc---CCCCCccCCCCCCHHHHHHH
Confidence 455666644 7889999 99999999988755321 11 111 12346778888888877654
No 49
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=96.06 E-value=0.0044 Score=55.81 Aligned_cols=21 Identities=14% Similarity=0.050 Sum_probs=14.8
Q ss_pred ccccCCCCCchhhhhhhccCCc
Q 045342 11 QLIDESTKDNILHLAAKLALPT 32 (243)
Q Consensus 11 ~~~D~~G~NT~LHLAa~~~~~~ 32 (243)
+.+|++| +||||+|++.++.+
T Consensus 305 ~~~~~~g-~t~L~~A~~~g~~~ 325 (437)
T 1n11_A 305 DATTRMG-YTPLHVASHYGNIK 325 (437)
T ss_dssp TCCCSSC-CCHHHHHHHSSCSH
T ss_pred CCCCCCC-CCHHHHHHHcCcHH
Confidence 5667777 77777777776654
No 50
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=96.04 E-value=0.0045 Score=52.23 Aligned_cols=72 Identities=13% Similarity=0.015 Sum_probs=41.1
Q ss_pred hhhhhhhc-------cccccCCCCCchhhhhhhccCCcchhhh---hhHHhhcchhhhhhhccccccccCCCCCChHHHH
Q 045342 2 DVYNKFIS-------PQLIDESTKDNILHLAAKLALPTHLRIM---LGVALKMQREVEKLVHHFLKKVQNIDGKTAQDIF 71 (243)
Q Consensus 2 ~~~~~~~~-------~~~~D~~G~NT~LHLAa~~~~~~~~~~~---~~~aL~m~~eV~~~vp~~~~~~~N~~g~Tp~dif 71 (243)
++.+.|+. ++.+|++| +||||+|++.++...-... .-..+.++...+-.......+.+|++|+||.++.
T Consensus 162 ~~v~~Ll~~~~~gad~~~~d~~g-~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A 240 (273)
T 2pnn_A 162 AIVKFLLQNSWQPADISARDSVG-NTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALA 240 (273)
T ss_dssp HHHHHHHHCSSCCCCTTCCCTTS-CCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHH
T ss_pred HHHHHHHhcccCCCCceeeCCCC-CcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHH
Confidence 45666776 37899999 9999999998774321000 0001111111110000111256899999999998
Q ss_pred Hhh
Q 045342 72 IEQ 74 (243)
Q Consensus 72 ~~~ 74 (243)
.+.
T Consensus 241 ~~~ 243 (273)
T 2pnn_A 241 ASS 243 (273)
T ss_dssp HHT
T ss_pred HHh
Confidence 764
No 51
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=96.04 E-value=0.0044 Score=48.16 Aligned_cols=31 Identities=19% Similarity=0.203 Sum_probs=22.9
Q ss_pred hhhhhhhcc-----ccccCCCCCchhhhhhhccCCcc
Q 045342 2 DVYNKFISP-----QLIDESTKDNILHLAAKLALPTH 33 (243)
Q Consensus 2 ~~~~~~~~~-----~~~D~~G~NT~LHLAa~~~~~~~ 33 (243)
++.+.|+.. +..|.+| +||||+|+..++.+.
T Consensus 22 ~~v~~ll~~~~~~~~~~~~~g-~t~L~~A~~~~~~~~ 57 (165)
T 3twr_A 22 ETVKKLCTVQSVNCRDIEGRQ-STPLHFAAGYNRVSV 57 (165)
T ss_dssp HHHHHHCCTTTTTCCCTTTTC-CCHHHHHHHTTCHHH
T ss_pred HHHHHHHHcCCCCccccccCC-CCHHHHHHHcChHHH
Confidence 455666653 5678888 999999999887653
No 52
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=96.04 E-value=0.0036 Score=55.06 Aligned_cols=50 Identities=8% Similarity=0.095 Sum_probs=30.8
Q ss_pred cccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhc-cccccccCCCCCChHHHHHhh
Q 045342 10 PQLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVH-HFLKKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 10 ~~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp-~~~~~~~N~~g~Tp~dif~~~ 74 (243)
++.+|++| +||||+|+..++.+. |+..+. ....+.+|++|.||..+..+.
T Consensus 204 ~~~~~~~g-~t~L~~A~~~g~~~~--------------v~~Ll~~gad~~~~d~~g~tpL~~A~~~ 254 (364)
T 3ljn_A 204 LDYANKQG-NSHLHWAILINWEDV--------------AMRFVEMGIDVNMEDNEHTVPLYLSVRA 254 (364)
T ss_dssp TTCCCTTC-CCTTHHHHTTTCHHH--------------HHHHHTTTCCTTCCCTTSCCHHHHHHHT
T ss_pred ccccCCCC-CcHHHHHHHcCCHHH--------------HHHHHHcCCCCCCCCCCCCCHHHHHHHh
Confidence 45566666 677777766655432 222221 123578899999999887764
No 53
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=95.97 E-value=0.0044 Score=52.27 Aligned_cols=17 Identities=29% Similarity=0.307 Sum_probs=13.8
Q ss_pred ccccCCCCCChHHHHHh
Q 045342 57 KKVQNIDGKTAQDIFIE 73 (243)
Q Consensus 57 ~~~~N~~g~Tp~dif~~ 73 (243)
.+.+|++|.||.++..+
T Consensus 137 ~~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 137 IEVEDERGLTALELARE 153 (244)
T ss_dssp TTCCCTTCCCHHHHHHH
T ss_pred CCCCCCCCCcHHHHHHH
Confidence 56788999999988764
No 54
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=95.90 E-value=0.0057 Score=50.93 Aligned_cols=22 Identities=27% Similarity=0.295 Sum_probs=18.3
Q ss_pred ccccCCCCCchhhhhhhccCCcc
Q 045342 11 QLIDESTKDNILHLAAKLALPTH 33 (243)
Q Consensus 11 ~~~D~~G~NT~LHLAa~~~~~~~ 33 (243)
+.+|++| +||||+|++.++.+.
T Consensus 3 ~~~d~~g-~t~L~~A~~~g~~~~ 24 (282)
T 1oy3_D 3 GYVTEDG-DTALHLAVIHQHEPF 24 (282)
T ss_dssp CCCCTTC-CCHHHHHHHTTCHHH
T ss_pred CccCCCC-CcHHHHHHHcCCHHH
Confidence 4689999 999999999887553
No 55
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=95.86 E-value=0.0057 Score=54.77 Aligned_cols=48 Identities=19% Similarity=0.096 Sum_probs=25.9
Q ss_pred ccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhc-cccccccCCCCCChHHHHHh
Q 045342 11 QLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVH-HFLKKVQNIDGKTAQDIFIE 73 (243)
Q Consensus 11 ~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp-~~~~~~~N~~g~Tp~dif~~ 73 (243)
+.+|++| +||||+|++.++.+. |+..+. ....+.+|++|+||.++..+
T Consensus 307 n~~d~~g-~TpL~~A~~~g~~~i--------------v~~Ll~~gad~~~~d~~g~t~l~~A~~ 355 (373)
T 2fo1_E 307 DKQDEDG-KTPIMLAAQEGRIEV--------------VMYLIQQGASVEAVDATDHTARQLAQA 355 (373)
T ss_dssp TCCCTTC-CCHHHHHHHHTCHHH--------------HHHHHHTTCCSSCCCSSSCCHHHHHHH
T ss_pred cCcCCCC-CCHHHHHHHcCCHHH--------------HHHHHHcCCCccCCCCCCCCHHHHHHH
Confidence 4556666 666666666554332 111111 11245677777888777655
No 56
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=95.82 E-value=0.0059 Score=47.00 Aligned_cols=17 Identities=6% Similarity=0.239 Sum_probs=11.5
Q ss_pred ccccCCCCCChHHHHHh
Q 045342 57 KKVQNIDGKTAQDIFIE 73 (243)
Q Consensus 57 ~~~~N~~g~Tp~dif~~ 73 (243)
.+.+|.+|.||.....+
T Consensus 96 ~~~~~~~g~t~L~~A~~ 112 (162)
T 1ihb_A 96 VNIEDNEGNLPLHLAAK 112 (162)
T ss_dssp TTCCCTTSCCHHHHHHH
T ss_pred CCCcCCCCCCHHHHHHH
Confidence 45667778888776654
No 57
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=95.80 E-value=0.0063 Score=48.11 Aligned_cols=30 Identities=13% Similarity=0.081 Sum_probs=22.6
Q ss_pred hhhhhhcc-----ccccCCCCCchhhhhhhccCCcc
Q 045342 3 VYNKFISP-----QLIDESTKDNILHLAAKLALPTH 33 (243)
Q Consensus 3 ~~~~~~~~-----~~~D~~G~NT~LHLAa~~~~~~~ 33 (243)
+.+.|+.. +..|++| +||||+|+..++.+.
T Consensus 20 ~v~~ll~~~~~~~~~~~~~g-~t~L~~A~~~~~~~~ 54 (179)
T 3f6q_A 20 AVRLWLDNTENDLNQGDDHG-FSPLHWACREGRSAV 54 (179)
T ss_dssp HHHHHHHCTTSCTTCCCTTS-CCHHHHHHHTTCHHH
T ss_pred HHHHHHhcCcccccccCCCC-CCHHHHHHHcCcHHH
Confidence 44555543 6789999 999999999887653
No 58
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=95.79 E-value=0.0054 Score=50.02 Aligned_cols=52 Identities=17% Similarity=0.068 Sum_probs=30.9
Q ss_pred ccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhh-hccccccccCCCCCChHHHHHh
Q 045342 11 QLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKL-VHHFLKKVQNIDGKTAQDIFIE 73 (243)
Q Consensus 11 ~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~-vp~~~~~~~N~~g~Tp~dif~~ 73 (243)
+.+|++| +||||.|++.++.+.+..+ ++.. -.....+.+|++|.||......
T Consensus 3 ~~~d~~g-~t~L~~A~~~g~~~~v~~L----------l~~~~~~~~~~~~~~~~g~t~L~~A~~ 55 (241)
T 1k1a_A 3 TRADEDG-DTPLHIAVVQGNLPAVHRL----------VNLFQQGGRELDIYNNLRQTPLHLAVI 55 (241)
T ss_dssp ----CTT-CCHHHHHHHTTCHHHHHHH----------HHHHHHTTCCSCCCCTTSCCHHHHHHH
T ss_pred cccCCCC-CcHHHHHHHcCCHHHHHHH----------HHHHHhcCCCCCcccccCCCHHHHHHH
Confidence 5789999 9999999999886532111 1100 0123356778888888777654
No 59
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=95.76 E-value=0.0061 Score=49.31 Aligned_cols=29 Identities=21% Similarity=0.324 Sum_probs=19.0
Q ss_pred hhhhhhcc----ccccCCCCCchhhhhhhccCCc
Q 045342 3 VYNKFISP----QLIDESTKDNILHLAAKLALPT 32 (243)
Q Consensus 3 ~~~~~~~~----~~~D~~G~NT~LHLAa~~~~~~ 32 (243)
+.+.|+.. +.+|++| +||||.|+..++.+
T Consensus 107 ~~~~Ll~~g~~~~~~~~~g-~t~L~~A~~~~~~~ 139 (223)
T 2f8y_A 107 MLEDLINSHADVNAVDDLG-KSALHWAAAVNNVD 139 (223)
T ss_dssp HHHHHHHTTCCTTCBCTTS-CBHHHHHHHTTCHH
T ss_pred HHHHHHHcCCCCcCcCCCC-CcHHHHHHHcCCHH
Confidence 44445443 5677777 88888888776644
No 60
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=95.72 E-value=0.014 Score=48.53 Aligned_cols=48 Identities=19% Similarity=0.075 Sum_probs=31.6
Q ss_pred CCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhccccccccCCCCCChHHHHHh
Q 045342 15 ESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVHHFLKKVQNIDGKTAQDIFIE 73 (243)
Q Consensus 15 ~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp~~~~~~~N~~g~Tp~dif~~ 73 (243)
.+| +||||+|++.++.+... +. ++..-.....+.+|++|.||.....+
T Consensus 138 ~~g-~tpL~~A~~~g~~~~v~------~L----l~~~~~ga~~~~~d~~g~TpLh~A~~ 185 (260)
T 3jxi_A 138 YFG-ELPLSLAACTNQPHIVH------YL----TENGHKQADLRRQDSRGNTVLHALVA 185 (260)
T ss_dssp CSC-SSHHHHHHHTTCHHHHH------HH----HHCSSCCCCTTCCCTTSCCHHHHHHH
T ss_pred cCC-CCHHHHHHHcCCHHHHH------HH----HhccccCCCCcccCCCCCcHHHHHHH
Confidence 578 99999999988754321 11 11000123457889999999988774
No 61
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=95.69 E-value=0.0069 Score=49.81 Aligned_cols=52 Identities=19% Similarity=0.137 Sum_probs=28.2
Q ss_pred ccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhh-ccccccccCCCCCChHHHHHh
Q 045342 11 QLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLV-HHFLKKVQNIDGKTAQDIFIE 73 (243)
Q Consensus 11 ~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~v-p~~~~~~~N~~g~Tp~dif~~ 73 (243)
|.+|++| +||||+|+..++.+.+..+ ++... ++...+..|.+|.||..+...
T Consensus 2 ~~~d~~g-~t~L~~A~~~g~~~~v~~L----------l~~~~~~~~~~~~~~~~g~t~L~~A~~ 54 (236)
T 1ikn_D 2 QQLTEDG-DSFLHLAIIHEEKALTMEV----------IRQVKGDLAFLNFQNNLQQTPLHLAVI 54 (236)
T ss_dssp -----CC-CCTTHHHHHTTCSSSSSCC----------CC-----CCCCCCCCTTCCCHHHHHHH
T ss_pred CcCCCCC-CchhHHHHHcCChhHHHHH----------HHHhhccHHHhhccCCCCCCHHHHHHH
Confidence 5789999 9999999999886643211 11100 112346667777777666554
No 62
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=95.65 E-value=0.0079 Score=48.69 Aligned_cols=19 Identities=16% Similarity=-0.018 Sum_probs=13.7
Q ss_pred cccccCCCCCChHHHHHhh
Q 045342 56 LKKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 56 ~~~~~N~~g~Tp~dif~~~ 74 (243)
..+.+|.+|.||..+..+.
T Consensus 166 ~~~~~d~~g~t~L~~A~~~ 184 (228)
T 2dzn_A 166 AVNWQDKQGWTPLFHALAE 184 (228)
T ss_dssp CSCCCCTTSCCHHHHHHHT
T ss_pred cccCcCCCCCCHHHHHHHc
Confidence 3567788888988776543
No 63
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=95.64 E-value=0.005 Score=50.67 Aligned_cols=18 Identities=6% Similarity=0.027 Sum_probs=14.4
Q ss_pred ccccCCCCCChHHHHHhh
Q 045342 57 KKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 57 ~~~~N~~g~Tp~dif~~~ 74 (243)
.+.+|++|+||.++..+.
T Consensus 177 ~~~~~~~g~tpl~~A~~~ 194 (236)
T 1ikn_D 177 VNRVTYQGYSPYQLTWGR 194 (236)
T ss_dssp SCCCCTTCCCGGGGCTTS
T ss_pred CCcccCCCCCHHHHHHcc
Confidence 577889999999887653
No 64
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=95.64 E-value=0.0048 Score=50.59 Aligned_cols=62 Identities=3% Similarity=-0.155 Sum_probs=38.0
Q ss_pred hhhhhhcc----ccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhh-ccccccccCCCCC-ChHHHHHh
Q 045342 3 VYNKFISP----QLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLV-HHFLKKVQNIDGK-TAQDIFIE 73 (243)
Q Consensus 3 ~~~~~~~~----~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~v-p~~~~~~~N~~g~-Tp~dif~~ 73 (243)
+.+-||.. +.+|++| +||||+|+..++.+...... + |+..+ .....+.+|++|. ||......
T Consensus 57 iv~~Ll~~Gadvn~~d~~g-~TpLh~a~~~~~~~~~~~~~-----i---v~~Ll~~Gadin~~d~~g~ttpLh~A~~ 124 (186)
T 3t8k_A 57 ISMFLINKGADIKSRTKEG-TTLFFPLFQGGGNDITGTTE-----L---CKIFLEKGADITALYKPYKIVVFKNIFN 124 (186)
T ss_dssp HHHHHHHTTCCSSCCCTTC-CCTHHHHHHHCTTCHHHHHH-----H---HHHHHHTTCCSSSCBGGGTBCTTGGGGG
T ss_pred HHHHHHHCCCCCCCCCCCC-CcHHHHHHHcCCcchhhHHH-----H---HHHHHHCCCCCCccCCCcCchHHHHHHH
Confidence 45556554 7889899 99999999887643211000 0 22222 1224678899999 99776554
No 65
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=95.61 E-value=0.0071 Score=50.62 Aligned_cols=32 Identities=28% Similarity=0.280 Sum_probs=23.2
Q ss_pred hhhhhhhcc-----ccccCCCCCchhhhhhhccCCcch
Q 045342 2 DVYNKFISP-----QLIDESTKDNILHLAAKLALPTHL 34 (243)
Q Consensus 2 ~~~~~~~~~-----~~~D~~G~NT~LHLAa~~~~~~~~ 34 (243)
++.+.|+.. +.+|.+| +||||+|++.++.+..
T Consensus 104 ~~v~~Ll~~~~~~~~~~~~~g-~t~L~~A~~~~~~~~v 140 (253)
T 1yyh_A 104 GVFQILIRNRATDLDARMHDG-TTPLILAARLAVEGML 140 (253)
T ss_dssp HHHHHHHHSTTSCTTCCCTTC-CCHHHHHHHHTCSSHH
T ss_pred HHHHHHHHcCCCCccccCCCC-CcHHHHHHHcChHHHH
Confidence 345555543 5678889 9999999998876643
No 66
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=95.60 E-value=0.0071 Score=48.23 Aligned_cols=31 Identities=16% Similarity=0.045 Sum_probs=23.3
Q ss_pred hhhhhhhcc----ccccCCCCCchhhhhhhccCCcc
Q 045342 2 DVYNKFISP----QLIDESTKDNILHLAAKLALPTH 33 (243)
Q Consensus 2 ~~~~~~~~~----~~~D~~G~NT~LHLAa~~~~~~~ 33 (243)
++.+.|+.. +.+|.+| +||||+|++.++.+.
T Consensus 49 ~~v~~Ll~~~~~~~~~~~~g-~t~L~~A~~~~~~~~ 83 (192)
T 2rfm_A 49 NAIDKLVENFDKLEDKDIEG-STALIWAVKNNRLGI 83 (192)
T ss_dssp GGHHHHHHHHCCTTCCCTTS-CCHHHHHHHTTCHHH
T ss_pred HHHHHHHHhccccccccccC-ccHHHHHHHcCCHHH
Confidence 345555543 6789999 999999999887654
No 67
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=95.60 E-value=0.0084 Score=48.47 Aligned_cols=31 Identities=26% Similarity=0.246 Sum_probs=23.0
Q ss_pred hhhhhhhcc-----ccccCCCCCchhhhhhhccCCcc
Q 045342 2 DVYNKFISP-----QLIDESTKDNILHLAAKLALPTH 33 (243)
Q Consensus 2 ~~~~~~~~~-----~~~D~~G~NT~LHLAa~~~~~~~ 33 (243)
++.+.|+.. +..|.+| +||||+|++.++.+.
T Consensus 72 ~~v~~Ll~~~~~~~~~~~~~g-~t~L~~A~~~~~~~~ 107 (223)
T 2f8y_A 72 GVFQILIRNRATDLDARMHDG-TTPLILAARLAVEGM 107 (223)
T ss_dssp HHHHHHHHBTTSCTTCCCTTC-CCHHHHHHHHTCHHH
T ss_pred HHHHHHHHcCCCCcccCCCCC-CcHHHHHHHhCcHHH
Confidence 455556543 5678899 999999999887654
No 68
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=95.52 E-value=0.006 Score=53.06 Aligned_cols=49 Identities=27% Similarity=0.236 Sum_probs=31.4
Q ss_pred ccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhh--ccccccccCCCCCChHHHHHhh
Q 045342 11 QLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLV--HHFLKKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 11 ~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~v--p~~~~~~~N~~g~Tp~dif~~~ 74 (243)
+.+|++| +||||+|++.++.+. |+..+ .....+.+|++|+||..+..+.
T Consensus 233 n~~d~~g-~t~L~~a~~~~~~~~--------------v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~ 283 (337)
T 4g8k_A 233 NVRGERG-KTPLILAVEKKHLGL--------------VQRLLEQEHIEINDTDSDGKTALLLAVEL 283 (337)
T ss_dssp TCCCGGG-CCHHHHHHHTTCHHH--------------HHHHHTSTTCCTTCBCTTSCBHHHHHHHT
T ss_pred CCcCCCC-CCHHHHHHHhhhhHH--------------HHHHHHhcCCcccCcCCCCCCHHHHHHHc
Confidence 5677777 777777777665432 22222 1234678899999998887653
No 69
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=95.50 E-value=0.0087 Score=51.22 Aligned_cols=19 Identities=26% Similarity=0.253 Sum_probs=13.5
Q ss_pred cccCCCCCchhhhhhhccCC
Q 045342 12 LIDESTKDNILHLAAKLALP 31 (243)
Q Consensus 12 ~~D~~G~NT~LHLAa~~~~~ 31 (243)
..|.+| +||||+|+..+++
T Consensus 206 ~~~~~~-~t~L~~A~~~~~~ 224 (351)
T 3utm_A 206 KQPQSH-ETALHCAVASLHP 224 (351)
T ss_dssp CCTTTC-CCHHHHHHHCCST
T ss_pred cCCCCC-CCHHHHHHHHhCc
Confidence 456667 8888888877554
No 70
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=95.47 E-value=0.0089 Score=47.54 Aligned_cols=18 Identities=22% Similarity=0.397 Sum_probs=13.7
Q ss_pred ccccCCCCCChHHHHHhh
Q 045342 57 KKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 57 ~~~~N~~g~Tp~dif~~~ 74 (243)
.+.+|++|+||.++..+.
T Consensus 171 ~~~~~~~g~t~l~~A~~~ 188 (201)
T 3hra_A 171 QSIKDNSGRTAMDYANQK 188 (201)
T ss_dssp TTCCCTTSCCHHHHHHHH
T ss_pred CCccCCCCCCHHHHHHHc
Confidence 467788899998887653
No 71
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=95.45 E-value=0.0056 Score=46.42 Aligned_cols=48 Identities=2% Similarity=-0.137 Sum_probs=26.8
Q ss_pred ccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhccccccccCCC-CCChHHHHHh
Q 045342 11 QLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVHHFLKKVQNID-GKTAQDIFIE 73 (243)
Q Consensus 11 ~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp~~~~~~~N~~-g~Tp~dif~~ 73 (243)
+.+|++| +||||+|++ ++.+... +. ++. ....+.+|.+ |.||......
T Consensus 39 ~~~~~~g-~t~L~~A~~-~~~~~v~------~L----l~~---g~~~~~~~~~~g~t~L~~A~~ 87 (136)
T 1d9s_A 39 NALNRFG-RRPIQVMMM-GSAQVAE------LL----LLH---GAEPNCADPATLTRPVHDAAR 87 (136)
T ss_dssp TCCCTTC-CTTTTTSTT-SCHHHHH------HH----HHH---TCCSSCCBTTTTBCHHHHHHH
T ss_pred CCcCCCC-CCHHHHHHc-CCHHHHH------HH----HHC---CCCCCCcCCCCCCCHHHHHHH
Confidence 5566666 777777776 5433211 11 111 1224667778 8999877654
No 72
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=95.40 E-value=0.011 Score=46.40 Aligned_cols=30 Identities=27% Similarity=0.098 Sum_probs=20.4
Q ss_pred hhhhhhhcc----ccccCCCCCchhhhhhhccCCc
Q 045342 2 DVYNKFISP----QLIDESTKDNILHLAAKLALPT 32 (243)
Q Consensus 2 ~~~~~~~~~----~~~D~~G~NT~LHLAa~~~~~~ 32 (243)
++.+.|+.. +.+|++| +||||.|++.++.+
T Consensus 28 ~~v~~Ll~~g~~~~~~~~~g-~t~L~~A~~~~~~~ 61 (169)
T 2y1l_E 28 DEVRILMANGADVNAEDASG-WTPLHLAAFNGHLE 61 (169)
T ss_dssp HHHHHHHHTTCCTTCCCTTS-CCHHHHHHHTTCHH
T ss_pred HHHHHHHHCCCCCCCCCCCC-CCHHHHHHHcCCHH
Confidence 344555543 5678888 88888888877654
No 73
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=95.37 E-value=0.01 Score=49.36 Aligned_cols=46 Identities=15% Similarity=-0.002 Sum_probs=30.1
Q ss_pred CCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhccccccccCCCCCChHHHHHh
Q 045342 17 TKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVHHFLKKVQNIDGKTAQDIFIE 73 (243)
Q Consensus 17 G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp~~~~~~~N~~g~Tp~dif~~ 73 (243)
| +||||+|++.++.+... +. ++..-.....+.+|++|.||..+...
T Consensus 136 g-~tpL~~A~~~~~~~~v~------~L----l~~~~~ga~~n~~d~~g~TpLh~A~~ 181 (256)
T 2etb_A 136 G-ELPLSLAACTKQWDVVT------YL----LENPHQPASLEATDSLGNTVLHALVM 181 (256)
T ss_dssp C-SSHHHHHHHTTCHHHHH------HH----HHCSSCCCCTTCCCTTSCCHHHHHHH
T ss_pred C-CCHHHHHHHcCCHHHHH------HH----HhccccCCCcCccCCCCCCHHHHHHH
Confidence 8 99999999988754321 11 11000122457889999999988765
No 74
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=95.36 E-value=0.013 Score=50.47 Aligned_cols=30 Identities=17% Similarity=0.127 Sum_probs=23.6
Q ss_pred hhhhhhhcc----ccccCCCCCchhhhhhhccCCc
Q 045342 2 DVYNKFISP----QLIDESTKDNILHLAAKLALPT 32 (243)
Q Consensus 2 ~~~~~~~~~----~~~D~~G~NT~LHLAa~~~~~~ 32 (243)
++.+.|+.. +.+|.+| +||||.|+..+..+
T Consensus 100 ~~v~~Ll~~~a~~~~~~~~g-~t~l~~a~~~~~~~ 133 (269)
T 4b93_B 100 DLIPLLLKHGANAGARNADQ-AVPLHLACQQGHFQ 133 (269)
T ss_dssp THHHHHHHTTCCTTCCCTTC-CCHHHHHHHHTCHH
T ss_pred HHHHHHHhcCCCcCccCCCC-CCccccccccChHH
Confidence 455666654 6789999 99999999988755
No 75
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=95.34 E-value=0.011 Score=47.07 Aligned_cols=57 Identities=19% Similarity=0.176 Sum_probs=35.9
Q ss_pred hhhhhhc---cccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhccccccccC-CCCCChHHHHHh
Q 045342 3 VYNKFIS---PQLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVHHFLKKVQN-IDGKTAQDIFIE 73 (243)
Q Consensus 3 ~~~~~~~---~~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp~~~~~~~N-~~g~Tp~dif~~ 73 (243)
+.+.|+. ++.+|++| +||||+|+..++.+... +.+ +. ....+.+| ++|.||..+...
T Consensus 59 ~v~~Ll~~~~~~~~d~~g-~t~L~~A~~~~~~~~v~------~Ll----~~---ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 59 ALSQLLEDRDVDAVDENG-RTALLFVAGLGSDKCVR------LLA----EA---GADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHTTTSCTTCCCTTS-CCHHHHHHHHTCHHHHH------HHH----HT---TCCTTCCCSSSSCCHHHHHHH
T ss_pred HHHHHHhcCCCCCcCCCC-CCHHHHHHHcCCHHHHH------HHH----Hc---CCCCCcCCCCCCCCHHHHHHh
Confidence 3445553 46789999 99999999988754321 111 11 11234555 889999887654
No 76
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=95.33 E-value=0.012 Score=46.00 Aligned_cols=22 Identities=18% Similarity=-0.038 Sum_probs=16.6
Q ss_pred ccccCCCCCchhhhhhhccCCcc
Q 045342 11 QLIDESTKDNILHLAAKLALPTH 33 (243)
Q Consensus 11 ~~~D~~G~NT~LHLAa~~~~~~~ 33 (243)
+.+|++| +||||.|++.++.+.
T Consensus 30 ~~~~~~g-~t~L~~A~~~~~~~~ 51 (172)
T 3v30_A 30 NKPDERG-FTPLIWASAFGEIET 51 (172)
T ss_dssp GCCCTTS-CCHHHHHHHTTCHHH
T ss_pred cCCCCCC-CCHHHHHHHcCCHHH
Confidence 5667888 888888888776553
No 77
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=95.33 E-value=0.016 Score=47.17 Aligned_cols=64 Identities=16% Similarity=0.088 Sum_probs=39.7
Q ss_pred hhhhhhhcc-----ccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhccccccccCCCCCChHHHHHhh
Q 045342 2 DVYNKFISP-----QLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVHHFLKKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 2 ~~~~~~~~~-----~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp~~~~~~~N~~g~Tp~dif~~~ 74 (243)
++.+.|+.. +.+|++| +||||+|++.++.+... +.++... .+.....+..|.+|.||.......
T Consensus 17 ~~v~~Ll~~~g~~~~~~~~~g-~t~L~~A~~~g~~~~v~------~Ll~~~~--~~~~~~~~~~~~~g~t~L~~A~~~ 85 (232)
T 2rfa_A 17 QALSKLLKFEGCEVHQRGAMG-ETALHIAALYDNLEAAM------VLMEAAP--ELVFEPMTSELYEGQTALHIAVIN 85 (232)
T ss_dssp HHHHHHHTTTCSCTTCCCTTS-CCHHHHHHHTTCHHHHH------HHHHHCG--GGGGCCCCSTTTTTCCHHHHHHHT
T ss_pred HHHHHHHHhcCCCcccCCCCC-CCHHHHHHHcCCHHHHH------HHHHcCc--hhccccccccCCCCcCHHHHHHHc
Confidence 345566653 6789999 99999999998755321 1111111 011112356778999999887653
No 78
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=95.29 E-value=0.011 Score=49.77 Aligned_cols=59 Identities=14% Similarity=-0.035 Sum_probs=38.7
Q ss_pred hhhhhhhc----cccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhccccccccCCCCCChHHHHHhh
Q 045342 2 DVYNKFIS----PQLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVHHFLKKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 2 ~~~~~~~~----~~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp~~~~~~~N~~g~Tp~dif~~~ 74 (243)
++.+.|+. ++.+|++| +||||+|++.++.+... +. ++. ....+.+|.+|.||.......
T Consensus 17 ~~v~~Ll~~g~~~~~~~~~g-~t~L~~A~~~g~~~~v~------~L----l~~---g~~~~~~~~~g~t~L~~A~~~ 79 (261)
T 2xai_A 17 LSLRNLISQGWAVNIITADH-VSPLHEACLGGHLSCVK------IL----LKH---GAQVNGVTADWHTPLFNACVS 79 (261)
T ss_dssp HHHHHHHHTTCCSSCCCTTC-CCHHHHHHHHTCHHHHH------HH----HHT---TCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCcCCCC-CCHHHHHHHcCCHHHHH------HH----HHC---CCCCCCCCCCCCCHHHHHHHc
Confidence 34555554 47899999 99999999998755321 11 111 123467788899998776553
No 79
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=95.28 E-value=0.011 Score=49.71 Aligned_cols=29 Identities=24% Similarity=0.106 Sum_probs=20.7
Q ss_pred hhhhhhc----cccccCCCCCchhhhhhhccCCc
Q 045342 3 VYNKFIS----PQLIDESTKDNILHLAAKLALPT 32 (243)
Q Consensus 3 ~~~~~~~----~~~~D~~G~NT~LHLAa~~~~~~ 32 (243)
+.+.|+. ++.+|++| +||||+|+..++.+
T Consensus 36 ~v~~Ll~~g~~~~~~d~~g-~tpLh~A~~~g~~~ 68 (229)
T 2vge_A 36 VVQQAVKEMNDPSQPNEEG-ITALHNAICGANYS 68 (229)
T ss_dssp HHHHHHHHSSCTTCCCTTS-CCHHHHHHHTTCHH
T ss_pred HHHHHHhcCCCCCCCCCCC-CCHHHHHHHcCCHH
Confidence 4455554 36788888 89999998887654
No 80
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=95.26 E-value=0.012 Score=42.82 Aligned_cols=58 Identities=19% Similarity=0.209 Sum_probs=37.7
Q ss_pred hhhhhhc----cccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhccccccccCCCCCChHHHHHhh
Q 045342 3 VYNKFIS----PQLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVHHFLKKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 3 ~~~~~~~----~~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp~~~~~~~N~~g~Tp~dif~~~ 74 (243)
+.+.|+. ++.+|++| +||||.|++.++.+... +. ++. ....+.+|.+|.||.....+.
T Consensus 17 ~v~~Ll~~~~~~~~~~~~g-~t~L~~A~~~~~~~~~~------~L----l~~---g~~~~~~~~~g~t~l~~A~~~ 78 (126)
T 1n0r_A 17 VVKLLLEAGADVNAKDKNG-RTPLHLAARNGHLEVVK------LL----LEA---GADVNAKDKNGRTPLHLAARN 78 (126)
T ss_dssp HHHHHHHHTCCTTCCCTTS-CCHHHHHHHHTCHHHHH------HH----HHT---TCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHHcCCCCCCcCCCC-CcHHHHHHHcCcHHHHH------HH----HHc---CCCCcccCCCCCcHHHHHHHc
Confidence 4455554 36789999 99999999987754321 11 111 122467788999998877653
No 81
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=95.21 E-value=0.0093 Score=49.77 Aligned_cols=56 Identities=16% Similarity=0.034 Sum_probs=36.5
Q ss_pred hhhhhhhcc----ccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhccccccccCCCCC-ChHHHH
Q 045342 2 DVYNKFISP----QLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVHHFLKKVQNIDGK-TAQDIF 71 (243)
Q Consensus 2 ~~~~~~~~~----~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp~~~~~~~N~~g~-Tp~dif 71 (243)
++.+-|+.. +.+|++| +||||+|+..++.+... +.+ +. ....+.+|++|. ||.++.
T Consensus 84 ~~v~~Ll~~ga~~~~~d~~g-~tpL~~A~~~~~~~~v~------~Ll----~~---ga~~~~~~~~~~~t~l~~a 144 (239)
T 1ycs_B 84 EIVKFLVQFGVNVNAADSDG-WTPLHCAASCNNVQVCK------FLV----ES---GAAVFAMTYSDMQTAADKC 144 (239)
T ss_dssp HHHHHHHHHTCCTTCCCTTC-CCHHHHHHHTTCHHHHH------HHH----HT---TCCTTCCCSSSCCCHHHHC
T ss_pred HHHHHHHHcCCCCCccCCCC-CCHHHHHHHcCCHHHHH------HHH----Hc---CCCcceecCCCCcchHHHH
Confidence 455566654 7899999 99999999988754321 111 11 122456666665 999876
No 82
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=95.18 E-value=0.011 Score=54.20 Aligned_cols=18 Identities=17% Similarity=0.322 Sum_probs=14.6
Q ss_pred ccccCCCCCChHHHHHhh
Q 045342 57 KKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 57 ~~~~N~~g~Tp~dif~~~ 74 (243)
.+.+|++|.||.++..+.
T Consensus 294 ~~~~d~~G~TpL~~A~~~ 311 (368)
T 3jue_A 294 LGARDSEGRDPLTIAMET 311 (368)
T ss_dssp TTCCCTTSCCHHHHHHHT
T ss_pred CCCcCCCCCCHHHHHHHC
Confidence 577899999999987654
No 83
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=95.17 E-value=0.011 Score=51.29 Aligned_cols=33 Identities=15% Similarity=0.210 Sum_probs=24.6
Q ss_pred hhhhhhhcc----ccccCCCCCchhhhhhhccCCcch
Q 045342 2 DVYNKFISP----QLIDESTKDNILHLAAKLALPTHL 34 (243)
Q Consensus 2 ~~~~~~~~~----~~~D~~G~NT~LHLAa~~~~~~~~ 34 (243)
|+.+.||.. +.+|+++|+||||+|++.++.+..
T Consensus 39 ~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv 75 (337)
T 4g8k_A 39 DLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIV 75 (337)
T ss_dssp HHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHH
Confidence 566777754 677776339999999999886643
No 84
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=95.17 E-value=0.0059 Score=47.40 Aligned_cols=54 Identities=13% Similarity=-0.049 Sum_probs=25.1
Q ss_pred hhhhhhhcc----ccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhccccccccCCCCCChHH
Q 045342 2 DVYNKFISP----QLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVHHFLKKVQNIDGKTAQD 69 (243)
Q Consensus 2 ~~~~~~~~~----~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp~~~~~~~N~~g~Tp~d 69 (243)
++.+.|+.. +.+|++| +||||+|++.++.+.. .+.++.. ...+.+|.+|+||.+
T Consensus 92 ~~v~~Ll~~ga~~~~~d~~g-~tpl~~A~~~~~~~~v------~~Ll~~g-------a~~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 92 DTLVVLHRAGARLDVRDAWG-RLPVDLAEELGHRDVA------RYLRAAA-------GGTRGSNHARIDAAE 149 (156)
T ss_dssp HHHHHHHHHTCCSSCCCTTC-CCHHHHHHHHTCHHHH------HHHSSCC----------------------
T ss_pred HHHHHHHHcCCCCcccCCCC-CCHHHHHHHhCHHHHH------HHHHHcC-------CCCCccCcCcCcccc
Confidence 345556554 7889999 9999999998875422 1111111 124677888888765
No 85
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=95.15 E-value=0.0095 Score=51.12 Aligned_cols=50 Identities=14% Similarity=0.073 Sum_probs=33.4
Q ss_pred cccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhccccccccCCCCCChHHHHH
Q 045342 10 PQLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVHHFLKKVQNIDGKTAQDIFI 72 (243)
Q Consensus 10 ~~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp~~~~~~~N~~g~Tp~dif~ 72 (243)
++.+|++| +||||+|++.++.+... +. ++. .....+..|.+|.||..+..
T Consensus 104 ~n~~d~~g-~T~Lh~A~~~g~~~~v~------~L----l~~--g~~~~~~~~~~g~tpL~~a~ 153 (276)
T 4hbd_A 104 VNIADSNG-NTALHYSVSHANFPVVQ------QL----LDS--GVCKVDKQNRAGYSPIMLTA 153 (276)
T ss_dssp HTCCCTTS-CCHHHHHHHTTCHHHHH------HH----HHT--SCCCTTCCCTTSCCHHHHGG
T ss_pred CcCCCCCC-CCHHHHHHHCCCHHHHH------HH----HHC--CCCcCCCCCCCCCCHHHHHH
Confidence 47899999 99999999998755321 11 111 11135677888888876654
No 86
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=95.11 E-value=0.013 Score=45.57 Aligned_cols=21 Identities=24% Similarity=0.009 Sum_probs=16.2
Q ss_pred ccccCCCCCchhhhhhhccCCc
Q 045342 11 QLIDESTKDNILHLAAKLALPT 32 (243)
Q Consensus 11 ~~~D~~G~NT~LHLAa~~~~~~ 32 (243)
+.+|++| +||||.|++.++.+
T Consensus 30 ~~~~~~g-~t~L~~A~~~~~~~ 50 (167)
T 3v31_A 30 NHTDEEG-FTPLMWAAAHGQIA 50 (167)
T ss_dssp TCCCTTS-CCHHHHHHHTTCHH
T ss_pred CCCCCCC-CCHHHHHHHCCCHH
Confidence 5678888 88888888877654
No 87
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=95.07 E-value=0.014 Score=49.22 Aligned_cols=47 Identities=15% Similarity=0.056 Sum_probs=31.1
Q ss_pred CCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhccccccccCCCCCChHHHHHh
Q 045342 16 STKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVHHFLKKVQNIDGKTAQDIFIE 73 (243)
Q Consensus 16 ~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp~~~~~~~N~~g~Tp~dif~~ 73 (243)
+| +||||+|++.++.+... +. ++........+.+|++|.||..+..+
T Consensus 147 ~g-~tpL~~A~~~g~~~~v~------~L----l~~~~~gad~~~~d~~g~tpLh~A~~ 193 (273)
T 2pnn_A 147 FG-ELPLSLAACTNQLAIVK------FL----LQNSWQPADISARDSVGNTVLHALVE 193 (273)
T ss_dssp SC-BSHHHHHHHTTCHHHHH------HH----HHCSSCCCCTTCCCTTSCCHHHHHHH
T ss_pred CC-CCHHHHHHHcCCHHHHH------HH----HhcccCCCCceeeCCCCCcHHHHHHH
Confidence 78 99999999998754321 11 11000123457889999999988765
No 88
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=95.07 E-value=0.015 Score=51.10 Aligned_cols=50 Identities=12% Similarity=0.118 Sum_probs=33.9
Q ss_pred cc-ccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhccccccccCCCCCChHHHHHhh
Q 045342 11 QL-IDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVHHFLKKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 11 ~~-~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp~~~~~~~N~~g~Tp~dif~~~ 74 (243)
+. +|++| +||||+|++.++.+... +.+ +. ....+.+|++|.||.......
T Consensus 124 n~~~d~~g-~TpLh~Aa~~g~~~~v~------~Ll----~~---Gad~n~~d~~g~TpLh~A~~~ 174 (327)
T 1sw6_A 124 NIPVDEHG-NTPLHWLTSIANLELVK------HLV----KH---GSNRLYGDNMGESCLVKAVKS 174 (327)
T ss_dssp CSCCSTTC-CCHHHHHHHTTCHHHHH------HHH----HT---TCCTTBCCTTCCCHHHHHHHS
T ss_pred ccccCCCC-CcHHHHHHHcCCHHHHH------HHH----Hc---CCCCCCcCCCCCCHHHHHHHh
Confidence 56 89999 99999999998755321 111 11 123467788888888776653
No 89
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=95.00 E-value=0.015 Score=46.23 Aligned_cols=18 Identities=28% Similarity=-0.108 Sum_probs=13.0
Q ss_pred cccccCCCCCChHHHHHh
Q 045342 56 LKKVQNIDGKTAQDIFIE 73 (243)
Q Consensus 56 ~~~~~N~~g~Tp~dif~~ 73 (243)
..+.+|++|.||......
T Consensus 132 ~~~~~~~~g~t~L~~A~~ 149 (201)
T 3hra_A 132 DIDFQNDFGYTALIEAVG 149 (201)
T ss_dssp CTTCCCTTSCCHHHHHHH
T ss_pred CcCCCCCCCCCHHHHHHH
Confidence 356778888888877654
No 90
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=94.90 E-value=0.018 Score=46.91 Aligned_cols=17 Identities=24% Similarity=0.282 Sum_probs=11.9
Q ss_pred ccccCCCCCChHHHHHh
Q 045342 57 KKVQNIDGKTAQDIFIE 73 (243)
Q Consensus 57 ~~~~N~~g~Tp~dif~~ 73 (243)
.+..|.+|.||..+..+
T Consensus 170 ~~~~~~~g~t~L~~A~~ 186 (237)
T 3b7b_A 170 LHAVNIHGDSPLHIAAR 186 (237)
T ss_dssp TTCCCTTCCCHHHHHHH
T ss_pred CCCcCCCCCCHHHHHHH
Confidence 45667788888777654
No 91
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=94.81 E-value=0.018 Score=49.45 Aligned_cols=17 Identities=12% Similarity=-0.312 Sum_probs=11.6
Q ss_pred ccccCCCCCChHHHHHh
Q 045342 57 KKVQNIDGKTAQDIFIE 73 (243)
Q Consensus 57 ~~~~N~~g~Tp~dif~~ 73 (243)
.+.+|.+|.||......
T Consensus 118 ~~~~~~~g~t~L~~A~~ 134 (285)
T 3d9h_A 118 VNGVTADWHTPLFNACV 134 (285)
T ss_dssp SSCCCTTCCCHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHH
Confidence 45677788888766554
No 92
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=94.78 E-value=0.014 Score=48.86 Aligned_cols=56 Identities=20% Similarity=0.026 Sum_probs=36.3
Q ss_pred hhhhhhhcc----ccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhcccccccc-CCCCCChHHHH
Q 045342 2 DVYNKFISP----QLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVHHFLKKVQ-NIDGKTAQDIF 71 (243)
Q Consensus 2 ~~~~~~~~~----~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp~~~~~~~-N~~g~Tp~dif 71 (243)
++.+-|+.. +.+|.+| +||||+|++.++.+... +.++.. ...+.. |.+|.||..+.
T Consensus 68 ~~v~~Ll~~ga~~n~~d~~g-~tpLh~A~~~g~~~~v~------~Ll~~g-------a~~~~~~~~~g~tpL~~A 128 (229)
T 2vge_A 68 SIVDFLITAGANVNSPDSHG-WTPLHCAASCNDTVICM------ALVQHG-------AAIFATTLSDGATAFEKC 128 (229)
T ss_dssp HHHHHHHHTTCCTTCCCTTC-CCHHHHHHHTTCHHHHH------HHHTTT-------CCTTCCCSSTTCCTGGGC
T ss_pred HHHHHHHHCCCCCCCCCCCC-CCHHHHHHHcCCHHHHH------HHHHcC-------CCcccccCCCCCCHHHHH
Confidence 345556544 6899999 99999999988754321 111111 123444 56999999886
No 93
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=94.74 E-value=0.019 Score=48.44 Aligned_cols=57 Identities=9% Similarity=-0.033 Sum_probs=34.3
Q ss_pred hhhhhhc----cccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhccccccccCCCCCChHHHHHh
Q 045342 3 VYNKFIS----PQLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVHHFLKKVQNIDGKTAQDIFIE 73 (243)
Q Consensus 3 ~~~~~~~----~~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp~~~~~~~N~~g~Tp~dif~~ 73 (243)
+.+.|+. ++.+|.+| +||||+|+..++.+... +.+ +. ....+..|.+|.||......
T Consensus 55 ~v~~Ll~~g~~~~~~~~~g-~t~L~~A~~~g~~~~v~------~Ll----~~---ga~~~~~~~~g~tpL~~A~~ 115 (299)
T 1s70_B 55 EVLRLLERGADINYANVDG-LTALHQACIDDNVDMVK------FLV----EN---GANINQPDNEGWIPLHAAAS 115 (299)
T ss_dssp HHHHHHHHCCCTTCBCTTC-CBHHHHHHHTTCHHHHH------HHH----HT---TCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHHHcCCCCcccCCCC-CCHHHHHHHcCCHHHHH------HHH----HC---CCCCCCCCCCCCcHHHHHHH
Confidence 4445554 36788999 99999999988754321 111 11 11235567777777766543
No 94
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=94.71 E-value=0.022 Score=51.19 Aligned_cols=29 Identities=24% Similarity=0.177 Sum_probs=18.5
Q ss_pred hhhhhhcc----ccccCCCCCchhhhhhhccCCc
Q 045342 3 VYNKFISP----QLIDESTKDNILHLAAKLALPT 32 (243)
Q Consensus 3 ~~~~~~~~----~~~D~~G~NT~LHLAa~~~~~~ 32 (243)
+.+.|+.. +.+|++| +||||+|++.++.+
T Consensus 260 ~v~~Ll~~~~~~~~~~~~g-~t~L~~A~~~~~~~ 292 (437)
T 1n11_A 260 MVALLLSKQANGNLGNKSG-LTPLHLVAQEGHVP 292 (437)
T ss_dssp HHHHHHTTTCCTTCCCTTC-CCHHHHHHHHTCHH
T ss_pred HHHHHHhcCCCCCCCCCCC-CCHHHHHHHcCCHH
Confidence 44445443 5667777 78888877766544
No 95
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=94.59 E-value=0.024 Score=47.64 Aligned_cols=58 Identities=19% Similarity=0.163 Sum_probs=36.9
Q ss_pred hhhhhhc---cccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhccccccccC-CCCCChHHHHHhh
Q 045342 3 VYNKFIS---PQLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVHHFLKKVQN-IDGKTAQDIFIEQ 74 (243)
Q Consensus 3 ~~~~~~~---~~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp~~~~~~~N-~~g~Tp~dif~~~ 74 (243)
+.+.|+. ++.+|++| +||||+|+..++.+... +.+ +. ....+..| ++|.||..+....
T Consensus 60 ~v~~Ll~~~~~~~~d~~g-~t~L~~A~~~g~~~~v~------~Ll----~~---ga~~~~~~~~~g~t~L~~A~~~ 121 (244)
T 3ui2_A 60 ALSQLLEDRDVDAVDENG-RTALLFVAGLGSDKCVR------LLA----EA---GADLDHRDMRGGLTALHMAAGY 121 (244)
T ss_dssp HHHHTTTTCCTTCBCTTS-CBHHHHHHHHTCHHHHH------HHH----HT---TCCTTCCCSSSCCCHHHHHHHT
T ss_pred HHHHHHcCCCCCCcCCCC-CCHHHHHHHCCCHHHHH------HHH----Hc---CCCCCcCCCCCCCCHHHHHHHc
Confidence 4455554 47889999 99999999988754321 111 11 11234555 7899998877653
No 96
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=94.54 E-value=0.023 Score=46.10 Aligned_cols=21 Identities=19% Similarity=0.162 Sum_probs=14.6
Q ss_pred ccccCCCCCchhhhhhhccCCc
Q 045342 11 QLIDESTKDNILHLAAKLALPT 32 (243)
Q Consensus 11 ~~~D~~G~NT~LHLAa~~~~~~ 32 (243)
+.+|++| +||||.|+..++.+
T Consensus 100 ~~~~~~g-~t~L~~A~~~~~~~ 120 (231)
T 3aji_A 100 NAVNQNG-CTPLHYAASKNRHE 120 (231)
T ss_dssp TCCCTTS-CCHHHHHHHTTCHH
T ss_pred CCCCCCC-CCHHHHHHHcCCHH
Confidence 5667777 77777777766544
No 97
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=94.51 E-value=0.02 Score=46.11 Aligned_cols=18 Identities=33% Similarity=0.488 Sum_probs=14.8
Q ss_pred ccccCCCCCChHHHHHhh
Q 045342 57 KKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 57 ~~~~N~~g~Tp~dif~~~ 74 (243)
.+.+|.+|+||.++..+.
T Consensus 203 ~~~~~~~g~t~l~~A~~~ 220 (240)
T 3eu9_A 203 VDAQNIKGESALDLAKQR 220 (240)
T ss_dssp TTCBCTTSCBHHHHHHHT
T ss_pred CCCcCCCCCCHHHHHHHc
Confidence 567889999999988764
No 98
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=94.38 E-value=0.023 Score=41.44 Aligned_cols=50 Identities=18% Similarity=0.134 Sum_probs=33.6
Q ss_pred ccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhccccccccCCCCCChHHHHHhh
Q 045342 11 QLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVHHFLKKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 11 ~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp~~~~~~~N~~g~Tp~dif~~~ 74 (243)
..+|++| +||||.|++.++.+.+. +.+ +. ....+.+|.+|.||.......
T Consensus 3 ~~~d~~g-~t~L~~A~~~~~~~~~~------~Ll----~~---g~~~~~~d~~g~t~L~~A~~~ 52 (115)
T 2l6b_A 3 MWGSKDG-NTPLHNAAKNGHAEEVK------KLL----SK---GADVNARSKDGNTPLHLAAKN 52 (115)
T ss_dssp -CCSCSS-CCHHHHHHHHTCHHHHH------HHT----TT---TCCSSCCCSSSCCTTHHHHTT
T ss_pred cccCCCC-CCHHHHHHHcCCHHHHH------HHH----Hc---CCCCCCcCCCCCCHHHHHHHc
Confidence 3689999 99999999998754321 111 11 112467889999998776543
No 99
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=94.22 E-value=0.024 Score=48.56 Aligned_cols=19 Identities=16% Similarity=-0.087 Sum_probs=9.9
Q ss_pred ccccCCCCCchhhhhhhccC
Q 045342 11 QLIDESTKDNILHLAAKLAL 30 (243)
Q Consensus 11 ~~~D~~G~NT~LHLAa~~~~ 30 (243)
+.+|++| +||||+|+..++
T Consensus 184 ~~~d~~g-~t~L~~A~~~~~ 202 (285)
T 3d9h_A 184 DHKISHL-GTPLYLACENQQ 202 (285)
T ss_dssp TCCBTTT-BCHHHHHHHTTC
T ss_pred CCcCCCC-CCHHHHHHHcCc
Confidence 3455555 555555555544
No 100
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=94.06 E-value=0.017 Score=40.85 Aligned_cols=30 Identities=23% Similarity=0.273 Sum_probs=23.1
Q ss_pred hhhhhhhcc----ccccCCCCCchhhhhhhccCCc
Q 045342 2 DVYNKFISP----QLIDESTKDNILHLAAKLALPT 32 (243)
Q Consensus 2 ~~~~~~~~~----~~~D~~G~NT~LHLAa~~~~~~ 32 (243)
++.+-|++. +.+|++| +||||+|++.++.+
T Consensus 49 ~~v~~Ll~~ga~~~~~d~~g-~t~l~~A~~~~~~~ 82 (93)
T 1n0q_A 49 EVVKLLLEAGADVNAKDKNG-RTPLHLAARNGHLE 82 (93)
T ss_dssp HHHHHHHHTTCCTTCCCTTS-CCHHHHHHHTTCHH
T ss_pred HHHHHHHHcCCCCCccCCCC-CCHHHHHHHcCCHH
Confidence 345555554 6889999 99999999988754
No 101
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=93.74 E-value=0.021 Score=41.92 Aligned_cols=50 Identities=16% Similarity=0.158 Sum_probs=31.7
Q ss_pred ccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhccccccccCCCCCChHHHHHhh
Q 045342 11 QLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVHHFLKKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 11 ~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp~~~~~~~N~~g~Tp~dif~~~ 74 (243)
...|.+| +|+||.|++.++.+.+.. | ++. ....+.+|.+|.||..+....
T Consensus 18 ~~~~~~g-~t~L~~A~~~g~~~~v~~-----L-----l~~---g~~i~~~d~~g~tpLh~A~~~ 67 (110)
T 2zgd_A 18 SHMGSDL-GKKLLEAARAGQDDEVRI-----L-----MAN---GADVAAKDKNGSTPLHLAARN 67 (110)
T ss_dssp ----CCH-HHHHHHHHHHTCHHHHHH-----H-----HHT---TCCTTCCCTTCCCHHHHHHHT
T ss_pred cccCCcc-chHHHHHHHcCCHHHHHH-----H-----HHc---CCCCCccCCCCCCHHHHHHHc
Confidence 5789999 999999999987553211 1 111 123467889999998776553
No 102
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=93.71 E-value=0.04 Score=45.40 Aligned_cols=29 Identities=14% Similarity=0.204 Sum_probs=17.3
Q ss_pred hhhhhhcc----ccc-cCCCCCchhhhhhhccCCc
Q 045342 3 VYNKFISP----QLI-DESTKDNILHLAAKLALPT 32 (243)
Q Consensus 3 ~~~~~~~~----~~~-D~~G~NT~LHLAa~~~~~~ 32 (243)
+.+.|+.. +.+ |++| +||||.|++.++.+
T Consensus 20 ~v~~Ll~~g~~~~~~~~~~g-~t~L~~A~~~g~~~ 53 (285)
T 1wdy_A 20 LVQQLLEGGANVNFQEEEGG-WTPLHNAVQMSRED 53 (285)
T ss_dssp HHHHHHHTTCCTTCCCTTTC-CCHHHHHHHTTCHH
T ss_pred HHHHHHHcCCCcccccCCCC-CcHHHHHHHcCCHH
Confidence 44445443 334 5556 77788777776654
No 103
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=93.71 E-value=0.043 Score=46.08 Aligned_cols=31 Identities=6% Similarity=-0.119 Sum_probs=23.2
Q ss_pred hhhhhhhcc----ccccCCCCCchhhhhhhccCCcc
Q 045342 2 DVYNKFISP----QLIDESTKDNILHLAAKLALPTH 33 (243)
Q Consensus 2 ~~~~~~~~~----~~~D~~G~NT~LHLAa~~~~~~~ 33 (243)
++.+.|+.. +.+|++| +||||.|++.++.+.
T Consensus 50 ~~v~~Ll~~g~~~~~~~~~g-~t~L~~A~~~~~~~~ 84 (261)
T 2xai_A 50 SCVKILLKHGAQVNGVTADW-HTPLFNACVSGSWDC 84 (261)
T ss_dssp HHHHHHHHTTCCTTCCCTTS-CCHHHHHHHHTCHHH
T ss_pred HHHHHHHHCCCCCCCCCCCC-CCHHHHHHHcCCHHH
Confidence 345555553 6789999 999999999887553
No 104
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=93.10 E-value=0.048 Score=46.79 Aligned_cols=17 Identities=18% Similarity=-0.040 Sum_probs=9.9
Q ss_pred ccccCCCC-CChHHHHHh
Q 045342 57 KKVQNIDG-KTAQDIFIE 73 (243)
Q Consensus 57 ~~~~N~~g-~Tp~dif~~ 73 (243)
.+.+|++| .||.....+
T Consensus 121 ~~~~~~~g~~t~L~~A~~ 138 (285)
T 3kea_A 121 LMFYGKTGWKTSFYHAVM 138 (285)
T ss_dssp GGGCSSSGGGSHHHHHHH
T ss_pred CCccCCCCCCCHHHHHHH
Confidence 34566666 677665544
No 105
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=92.98 E-value=0.085 Score=47.01 Aligned_cols=23 Identities=17% Similarity=0.039 Sum_probs=19.3
Q ss_pred cccccCCCCCchhhhhhhccCCcc
Q 045342 10 PQLIDESTKDNILHLAAKLALPTH 33 (243)
Q Consensus 10 ~~~~D~~G~NT~LHLAa~~~~~~~ 33 (243)
++.+|++| +||||+|+..++.+.
T Consensus 159 vn~~d~~g-~TpL~~A~~~g~~~i 181 (373)
T 2fo1_E 159 VNAMDCDE-NTPLMLAVLARRRRL 181 (373)
T ss_dssp TTCCCTTS-CCHHHHHHHHTCHHH
T ss_pred CcCCCCCC-CCHHHHHHHcChHHH
Confidence 47889999 999999999887553
No 106
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=92.96 E-value=0.054 Score=47.46 Aligned_cols=55 Identities=16% Similarity=0.073 Sum_probs=29.3
Q ss_pred ccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhccccccccCCCCCChHHHHHhh
Q 045342 11 QLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVHHFLKKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 11 ~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp~~~~~~~N~~g~Tp~dif~~~ 74 (243)
+.+|++| +||||+|+..++.+... +.++...+ .+....+..|.+|.||..+..+.
T Consensus 167 ~~~d~~g-~t~L~~A~~~g~~~~v~------~Ll~~g~~--~~~~~~~~~~~~g~t~L~~A~~~ 221 (364)
T 3ljn_A 167 TAKDKAD-ETPLMRAMEFRNREALD------LMMDTVPS--KSSLRLDYANKQGNSHLHWAILI 221 (364)
T ss_dssp TCCCTTS-CCHHHHHHHTTCHHHHH------HHHHHCSC--SSSCCTTCCCTTCCCTTHHHHTT
T ss_pred cccCCCC-CCHHHHHHHcCCHHHHH------HHHhcccc--cccccccccCCCCCcHHHHHHHc
Confidence 4566666 66666666665543211 11110000 01112567888999998877653
No 107
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=91.94 E-value=0.089 Score=45.50 Aligned_cols=53 Identities=25% Similarity=0.132 Sum_probs=33.5
Q ss_pred ccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhccccccccCCCCCChHHHHHhh
Q 045342 11 QLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVHHFLKKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 11 ~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp~~~~~~~N~~g~Tp~dif~~~ 74 (243)
+..|++| +||||+|+..++......+ .+.++. ....+.+|++|.||.......
T Consensus 163 ~~~~~~g-~t~Lh~A~~~~~~~~~~~v---~~Ll~~-------ga~in~~d~~g~TpLh~A~~~ 215 (278)
T 1dcq_A 163 ANGHEPD-ETALHLAVRSVDRTSLHIV---DFLVQN-------SGNLDKQTGKGSTALHYCCLT 215 (278)
T ss_dssp SSCSSTT-CBHHHHHHHHCCTTTHHHH---HHHHHH-------CSCTTCCCTTCCCHHHHHHHT
T ss_pred cccccCC-CCcchHHHHhcccchHHHH---HHHHHC-------CCCccccCCCCCCHHHHHHHc
Confidence 4568999 9999999998542211111 111111 123577899999998877653
No 108
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=91.65 E-value=0.13 Score=41.26 Aligned_cols=17 Identities=18% Similarity=0.212 Sum_probs=10.0
Q ss_pred CCCCCchhhhhhhccCCc
Q 045342 15 ESTKDNILHLAAKLALPT 32 (243)
Q Consensus 15 ~~G~NT~LHLAa~~~~~~ 32 (243)
+.| +||||+|+..++.+
T Consensus 74 ~~~-~t~L~~A~~~~~~~ 90 (240)
T 3eu9_A 74 DLN-STPLHWATRQGHLS 90 (240)
T ss_dssp TTT-BCHHHHHHHHTCHH
T ss_pred CcC-CChhHHHHHcCCHH
Confidence 335 66666666665543
No 109
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=91.32 E-value=0.065 Score=48.98 Aligned_cols=21 Identities=24% Similarity=0.181 Sum_probs=14.6
Q ss_pred ccccCCCCCchhhhhhhccCCc
Q 045342 11 QLIDESTKDNILHLAAKLALPT 32 (243)
Q Consensus 11 ~~~D~~G~NT~LHLAa~~~~~~ 32 (243)
+.+|.+| +||||+|+..++.+
T Consensus 262 n~~d~~G-~TpLh~A~~~g~~~ 282 (368)
T 3jue_A 262 NQADSAG-RGPLHHATILGHTG 282 (368)
T ss_dssp TCCCTTS-CCHHHHHHHHTCHH
T ss_pred CCCCCCC-CCHHHHHHHcCcHH
Confidence 5677777 77777777766644
No 110
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=90.83 E-value=0.18 Score=43.06 Aligned_cols=63 Identities=14% Similarity=0.037 Sum_probs=36.8
Q ss_pred ccccCCCCCchhhhhhhccCCcchhhh--hhH---------Hhh-----cchh-hhhhhcc-ccccccCCCCCChHHHHH
Q 045342 11 QLIDESTKDNILHLAAKLALPTHLRIM--LGV---------ALK-----MQRE-VEKLVHH-FLKKVQNIDGKTAQDIFI 72 (243)
Q Consensus 11 ~~~D~~G~NT~LHLAa~~~~~~~~~~~--~~~---------aL~-----m~~e-V~~~vp~-~~~~~~N~~g~Tp~dif~ 72 (243)
+.+|++| +||||.|++.++.+.+..+ .|+ +|. -+.| |+..+.. ...+.+|.+|.||.....
T Consensus 25 ~~~d~~g-~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~ 103 (285)
T 3kea_A 25 FKADVHG-HSASYYAIADNNVRLVCTLLNAGALKNLLENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAV 103 (285)
T ss_dssp TCCCTTS-CCHHHHHHHTTCHHHHHHHHHTTGGGSCCTTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CccCCCC-CCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHH
Confidence 6788899 9999999988876543211 111 111 1111 3333321 134677889999988766
Q ss_pred hh
Q 045342 73 EQ 74 (243)
Q Consensus 73 ~~ 74 (243)
..
T Consensus 104 ~~ 105 (285)
T 3kea_A 104 DS 105 (285)
T ss_dssp HT
T ss_pred Hc
Confidence 53
No 111
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=88.29 E-value=0.33 Score=45.24 Aligned_cols=50 Identities=24% Similarity=0.242 Sum_probs=30.6
Q ss_pred cCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhccccccccCCCCCChHHHHHhh
Q 045342 14 DESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVHHFLKKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 14 D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp~~~~~~~N~~g~Tp~dif~~~ 74 (243)
|.+| +||||+|+..+.......+ .+.++ . ....+.+|++|.||.-+....
T Consensus 168 ~~~g-~t~Lh~A~~~a~~g~~~~v---~~Ll~----~---ga~vn~~d~~g~TpLh~A~~~ 217 (497)
T 3lvq_E 168 QAPE-ELVLHLAVKVANQASLPLV---DFIIQ----N---GGHLDAKAADGNTALHYAALY 217 (497)
T ss_dssp CCSC-BCHHHHHHHTCCTTTHHHH---HHHHH----H---SCCTTCCCSSSCCHHHHHTTT
T ss_pred cccc-chHHHHHHHhcccccHHHH---HHHHH----c---CCCCCccCCCCCcHHHHHHHc
Confidence 8889 9999999773322211111 11111 1 123578899999998877653
No 112
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=87.55 E-value=0.44 Score=41.63 Aligned_cols=51 Identities=25% Similarity=0.245 Sum_probs=32.0
Q ss_pred ccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhccccccccCCCCCChHHHHHhh
Q 045342 13 IDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVHHFLKKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 13 ~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp~~~~~~~N~~g~Tp~dif~~~ 74 (243)
.|.+| +||||+|++.++...... ..+.++.. ...+.+|.+|.||.......
T Consensus 186 ~~~~g-~t~Lh~A~~~~~~~~~~i---v~~Ll~~g-------advn~~d~~G~TpLh~A~~~ 236 (301)
T 2b0o_E 186 AQAPE-ELVLHLAVKVANQASLPL---VDFIIQNG-------GHLDAKAADGNTALHYAALY 236 (301)
T ss_dssp SCSCE-ECHHHHHHHTCCTTTHHH---HHHHHHHS-------SCTTCCCTTCCCHHHHHHHT
T ss_pred cCCCC-ccHHHHHHHhcccCcHHH---HHHHHhcC-------CCCCCCCCCCCCHHHHHHHc
Confidence 58889 999999999843222111 11112211 23567899999998877653
No 113
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=78.34 E-value=0.29 Score=44.70 Aligned_cols=20 Identities=15% Similarity=0.054 Sum_probs=15.5
Q ss_pred ccCCCCCchhhhhhhccCCcc
Q 045342 13 IDESTKDNILHLAAKLALPTH 33 (243)
Q Consensus 13 ~D~~G~NT~LHLAa~~~~~~~ 33 (243)
.|.++ +||||.|++.++.+.
T Consensus 88 ~g~~~-~T~Lh~Aa~~G~~e~ 107 (376)
T 2aja_A 88 KGIKS-EVICFVAAITGCSSA 107 (376)
T ss_dssp HTCCH-HHHHHHHHHHCCHHH
T ss_pred cCCCc-CCHHHHHHHcCCHHH
Confidence 56778 889999988887653
No 114
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=56.07 E-value=4.8 Score=36.51 Aligned_cols=47 Identities=17% Similarity=0.142 Sum_probs=23.4
Q ss_pred ccccCCCCCchhhhhhhccCCcchhhhhhHHhhcchhhhhhhccccccccCCCCCChHHHHHhh
Q 045342 11 QLIDESTKDNILHLAAKLALPTHLRIMLGVALKMQREVEKLVHHFLKKVQNIDGKTAQDIFIEQ 74 (243)
Q Consensus 11 ~~~D~~G~NT~LHLAa~~~~~~~~~~~~~~aL~m~~eV~~~vp~~~~~~~N~~g~Tp~dif~~~ 74 (243)
...++.+ ||+||+|+..++.+.. +-.++ ....+|.-|+|+.+.-+..
T Consensus 313 g~~~n~~-~~~L~~A~~~g~~e~v--------------~lLl~--~~~v~~~~~~~~~~~~~~~ 359 (376)
T 2aja_A 313 ATIPGDA-NELLRLALRLGNQGAC--------------ALLLS--IPSVLALTKANNYYINETG 359 (376)
T ss_dssp CSSTTCC-CHHHHHHHHHTCTTHH--------------HHHTT--SHHHHHSCC----------
T ss_pred CCCCCCc-cHHHHHHHHcCcHHHH--------------HHHHc--ChHHHHHHHHhcccccccc
Confidence 3445567 9999999999987642 11111 1255667778887665543
Done!